Query psy2153
Match_columns 325
No_of_seqs 156 out of 236
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 17:39:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2153.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2153hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 98.8 2.6E-06 8.9E-11 79.7 23.5 125 12-142 79-212 (344)
2 3mmy_A MRNA export factor; mRN 98.4 0.0001 3.5E-09 65.5 23.6 119 16-142 40-171 (368)
3 3k26_A Polycomb protein EED; W 98.4 3E-05 1E-09 69.1 20.1 118 15-139 69-200 (366)
4 2ovr_B FBW7, F-BOX/WD repeat p 98.4 9.6E-05 3.3E-09 69.6 23.6 181 16-230 200-384 (445)
5 3f3f_A Nucleoporin SEH1; struc 98.3 0.00011 3.6E-09 64.2 20.2 125 15-143 11-155 (351)
6 1p22_A F-BOX/WD-repeat protein 98.3 0.00022 7.4E-09 67.2 23.5 116 16-139 174-293 (435)
7 2pm9_A Protein WEB1, protein t 98.3 0.00021 7E-09 65.4 22.1 132 7-141 59-207 (416)
8 1gxr_A ESG1, transducin-like e 98.3 0.00095 3.2E-08 58.6 25.5 130 9-140 45-181 (337)
9 3odt_A Protein DOA1; ubiquitin 98.3 0.00028 9.4E-09 61.6 21.6 121 8-139 96-222 (313)
10 4g56_B MGC81050 protein; prote 98.2 0.0003 1E-08 65.3 22.6 121 13-139 92-221 (357)
11 3v7d_B Cell division control p 98.2 0.00065 2.2E-08 63.8 24.9 118 17-141 124-246 (464)
12 1gxr_A ESG1, transducin-like e 98.2 0.0012 4.3E-08 57.8 25.3 128 14-146 96-229 (337)
13 1r5m_A SIR4-interacting protei 98.2 0.00042 1.4E-08 62.8 22.2 116 18-140 209-328 (425)
14 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.00053 1.8E-08 64.5 22.6 120 14-141 118-238 (445)
15 3jrp_A Fusion protein of prote 98.1 0.00046 1.6E-08 61.7 20.8 117 15-136 11-139 (379)
16 1yfq_A Cell cycle arrest prote 98.1 0.00035 1.2E-08 62.0 19.8 113 9-134 50-183 (342)
17 2ynn_A Coatomer subunit beta'; 98.1 0.0016 5.6E-08 58.4 23.9 110 15-134 13-131 (304)
18 1p22_A F-BOX/WD-repeat protein 98.1 0.00029 1E-08 66.4 19.6 123 8-138 205-332 (435)
19 3vl1_A 26S proteasome regulato 98.1 0.0062 2.1E-07 55.8 27.7 120 14-140 138-287 (420)
20 3v7d_B Cell division control p 98.1 0.0017 5.9E-08 60.9 24.1 131 8-138 195-348 (464)
21 4aez_A CDC20, WD repeat-contai 98.1 0.0016 5.3E-08 60.7 23.7 129 7-141 167-303 (401)
22 1sq9_A Antiviral protein SKI8; 98.0 0.00064 2.2E-08 61.8 19.8 120 15-136 16-168 (397)
23 2xyi_A Probable histone-bindin 98.0 0.0015 5.2E-08 61.7 23.1 132 6-139 119-274 (430)
24 3odt_A Protein DOA1; ubiquitin 98.0 0.00018 6.1E-09 62.8 15.4 123 14-143 183-308 (313)
25 1r5m_A SIR4-interacting protei 98.0 0.003 1E-07 57.1 23.9 129 12-143 42-192 (425)
26 3zwl_B Eukaryotic translation 98.0 0.0067 2.3E-07 53.7 25.7 135 4-141 104-259 (369)
27 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.00025 8.4E-09 65.6 16.8 136 5-142 27-173 (376)
28 1got_B GT-beta; complex (GTP-b 98.0 0.0045 1.5E-07 56.4 24.8 113 16-138 144-264 (340)
29 4a11_B DNA excision repair pro 98.0 0.0017 5.9E-08 58.6 21.7 126 5-137 131-282 (408)
30 3hxj_A Pyrrolo-quinoline quino 98.0 0.0001 3.4E-09 65.8 13.0 122 7-141 127-253 (330)
31 1sq9_A Antiviral protein SKI8; 97.9 0.0032 1.1E-07 57.1 22.8 125 16-140 122-276 (397)
32 3dsm_A Uncharacterized protein 97.9 0.00035 1.2E-08 64.4 16.3 123 13-143 41-173 (328)
33 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00055 1.9E-08 63.2 17.5 124 6-140 208-346 (376)
34 1vyh_C Platelet-activating fac 97.9 0.0043 1.5E-07 58.5 23.9 118 15-139 108-231 (410)
35 3mbr_X Glutamine cyclotransfer 97.9 0.00036 1.2E-08 64.4 15.6 131 4-142 51-190 (243)
36 3v9f_A Two-component system se 97.9 0.00028 9.6E-09 72.6 16.1 110 16-132 407-525 (781)
37 4ery_A WD repeat-containing pr 97.9 0.0071 2.4E-07 53.6 23.4 118 15-139 65-188 (312)
38 3k26_A Polycomb protein EED; W 97.9 0.00044 1.5E-08 61.5 15.4 119 15-138 18-154 (366)
39 1got_B GT-beta; complex (GTP-b 97.9 0.0062 2.1E-07 55.5 23.5 114 15-138 55-180 (340)
40 3nok_A Glutaminyl cyclase; bet 97.9 0.00034 1.2E-08 65.6 15.2 132 3-143 82-222 (268)
41 3vl1_A 26S proteasome regulato 97.8 0.0097 3.3E-07 54.5 24.5 106 25-141 109-222 (420)
42 1vyh_C Platelet-activating fac 97.8 0.0046 1.6E-07 58.3 22.4 121 8-139 142-273 (410)
43 3jrp_A Fusion protein of prote 97.8 0.0045 1.5E-07 55.2 21.1 113 15-133 55-193 (379)
44 3mbr_X Glutamine cyclotransfer 97.8 0.0016 5.6E-08 60.0 18.6 125 6-142 9-144 (243)
45 3ei3_B DNA damage-binding prot 97.8 0.011 3.8E-07 53.8 24.1 115 15-135 73-197 (383)
46 3i2n_A WD repeat-containing pr 97.8 0.0069 2.4E-07 53.6 21.9 120 14-139 17-157 (357)
47 1yfq_A Cell cycle arrest prote 97.8 0.0011 3.7E-08 58.9 16.6 130 6-139 141-290 (342)
48 3zwl_B Eukaryotic translation 97.8 0.0058 2E-07 54.1 21.3 118 15-140 32-160 (369)
49 3ott_A Two-component system se 97.8 0.00071 2.4E-08 69.3 17.4 107 16-133 22-132 (758)
50 2pbi_B Guanine nucleotide-bind 97.8 0.013 4.4E-07 54.0 24.4 111 16-136 155-276 (354)
51 1pgu_A Actin interacting prote 97.8 0.0074 2.5E-07 57.9 23.3 119 16-141 161-293 (615)
52 3nol_A Glutamine cyclotransfer 97.8 0.00079 2.7E-08 62.9 15.8 132 3-142 72-212 (262)
53 4a2l_A BT_4663, two-component 97.7 0.00042 1.4E-08 71.4 15.0 112 16-134 406-529 (795)
54 3mkq_A Coatomer beta'-subunit; 97.7 0.0074 2.5E-07 60.6 23.6 115 15-139 13-137 (814)
55 3hxj_A Pyrrolo-quinoline quino 97.7 0.00024 8.2E-09 63.3 11.4 123 5-141 48-175 (330)
56 3dsm_A Uncharacterized protein 97.7 0.00088 3E-08 61.7 15.4 127 6-141 74-222 (328)
57 2vdu_B TRNA (guanine-N(7)-)-me 97.7 0.0015 5.1E-08 61.9 16.9 140 6-148 137-288 (450)
58 1erj_A Transcriptional repress 97.7 0.017 5.8E-07 53.8 23.9 131 12-145 61-210 (393)
59 3jro_A Fusion protein of prote 97.7 0.0028 9.7E-08 65.1 20.1 116 15-135 9-136 (753)
60 3nok_A Glutaminyl cyclase; bet 97.7 0.0025 8.4E-08 59.8 17.5 123 7-142 44-175 (268)
61 2aq5_A Coronin-1A; WD40 repeat 97.6 0.0017 5.7E-08 60.2 16.3 123 15-139 81-215 (402)
62 2iwa_A Glutamine cyclotransfer 97.6 0.0017 6E-08 60.3 16.0 127 5-142 8-146 (266)
63 3v9f_A Two-component system se 97.6 0.00078 2.7E-08 69.3 14.6 117 16-133 66-194 (781)
64 3ow8_A WD repeat-containing pr 97.6 0.027 9.2E-07 51.2 23.5 123 8-137 114-243 (321)
65 3lrv_A PRE-mRNA-splicing facto 97.6 0.00093 3.2E-08 60.8 13.3 125 7-139 115-252 (343)
66 4aez_A CDC20, WD repeat-contai 97.6 0.0051 1.7E-07 57.2 18.5 123 7-139 124-256 (401)
67 2xzm_R RACK1; ribosome, transl 97.6 0.029 9.9E-07 50.9 23.1 114 15-131 21-149 (343)
68 3gre_A Serine/threonine-protei 97.6 0.0026 8.8E-08 59.2 16.2 134 7-141 103-255 (437)
69 2ynn_A Coatomer subunit beta'; 97.5 0.0045 1.6E-07 55.5 17.1 118 15-141 140-269 (304)
70 2pbi_B Guanine nucleotide-bind 97.5 0.042 1.4E-06 50.6 24.0 115 15-139 64-193 (354)
71 3ott_A Two-component system se 97.5 0.0044 1.5E-07 63.5 18.8 110 15-133 102-222 (758)
72 3gre_A Serine/threonine-protei 97.5 0.0019 6.5E-08 60.1 14.6 130 5-140 201-368 (437)
73 3mmy_A MRNA export factor; mRN 97.5 0.0021 7.3E-08 56.9 14.3 130 4-139 159-312 (368)
74 3iz6_a 40S ribosomal protein R 97.5 0.028 9.6E-07 52.0 22.4 115 16-141 158-290 (380)
75 1pgu_A Actin interacting prote 97.5 0.0031 1.1E-07 60.5 16.2 125 5-137 436-579 (615)
76 3nol_A Glutamine cyclotransfer 97.5 0.0015 5.2E-08 60.9 13.6 124 6-141 31-165 (262)
77 3ei3_B DNA damage-binding prot 97.5 0.0036 1.2E-07 57.1 15.7 121 14-143 117-252 (383)
78 4ery_A WD repeat-containing pr 97.5 0.01 3.5E-07 52.6 18.1 127 4-140 11-147 (312)
79 3frx_A Guanine nucleotide-bind 97.5 0.012 4.1E-07 53.2 18.9 111 16-131 18-138 (319)
80 1erj_A Transcriptional repress 97.5 0.07 2.4E-06 49.6 24.6 115 17-140 125-247 (393)
81 3sfz_A APAF-1, apoptotic pepti 97.4 0.035 1.2E-06 59.0 25.1 129 7-142 648-785 (1249)
82 3frx_A Guanine nucleotide-bind 97.4 0.0051 1.7E-07 55.7 16.2 120 15-145 107-241 (319)
83 4gga_A P55CDC, cell division c 97.4 0.058 2E-06 50.4 24.0 118 7-134 136-264 (420)
84 4ggc_A P55CDC, cell division c 97.4 0.052 1.8E-06 47.2 26.3 119 7-135 56-185 (318)
85 2pm9_A Protein WEB1, protein t 97.4 0.0041 1.4E-07 56.7 15.4 119 14-140 164-303 (416)
86 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.048 1.6E-06 49.7 22.5 111 15-133 105-227 (345)
87 3i2n_A WD repeat-containing pr 97.4 0.0015 5.2E-08 58.0 11.9 125 6-135 200-357 (357)
88 2iwa_A Glutamine cyclotransfer 97.4 0.0051 1.8E-07 57.1 16.0 131 5-142 53-192 (266)
89 3dwl_C Actin-related protein 2 97.4 0.018 6.3E-07 52.0 19.4 115 15-133 55-179 (377)
90 2ymu_A WD-40 repeat protein; u 97.4 0.043 1.5E-06 52.6 23.0 113 15-139 344-464 (577)
91 4g56_B MGC81050 protein; prote 97.4 0.0019 6.7E-08 59.8 12.7 125 7-139 172-309 (357)
92 1k8k_C P40, ARP2/3 complex 41 97.3 0.0047 1.6E-07 55.2 14.6 124 15-141 142-288 (372)
93 3lrv_A PRE-mRNA-splicing facto 97.3 0.0014 4.9E-08 59.6 11.3 123 16-140 77-211 (343)
94 1nir_A Nitrite reductase; hemo 97.3 0.0029 9.8E-08 63.2 14.5 118 18-139 373-522 (543)
95 3ow8_A WD repeat-containing pr 97.3 0.0091 3.1E-07 54.4 16.6 114 16-139 165-287 (321)
96 4a2l_A BT_4663, two-component 97.3 0.0071 2.4E-07 62.2 17.7 108 18-133 175-293 (795)
97 1l0q_A Surface layer protein; 97.3 0.0069 2.4E-07 55.1 15.7 131 5-144 63-202 (391)
98 1l0q_A Surface layer protein; 97.3 0.0072 2.4E-07 55.0 15.7 131 5-144 21-160 (391)
99 1k8k_C P40, ARP2/3 complex 41 97.3 0.0099 3.4E-07 53.1 16.3 125 14-141 95-243 (372)
100 4a11_B DNA excision repair pro 97.3 0.0064 2.2E-07 54.8 15.2 127 14-142 244-376 (408)
101 1nr0_A Actin interacting prote 97.3 0.11 3.7E-06 51.6 25.4 118 16-141 148-280 (611)
102 3dm0_A Maltose-binding peripla 97.3 0.047 1.6E-06 54.8 22.9 112 15-131 382-503 (694)
103 3bws_A Protein LP49; two-domai 97.3 0.0018 6.1E-08 59.9 11.2 133 7-144 114-256 (433)
104 3vu4_A KMHSV2; beta-propeller 97.3 0.0099 3.4E-07 54.8 16.2 126 6-133 91-273 (355)
105 3jro_A Fusion protein of prote 97.3 0.019 6.4E-07 59.0 19.8 111 15-133 53-191 (753)
106 3vgz_A Uncharacterized protein 97.3 0.011 3.7E-07 52.6 15.8 130 5-140 78-224 (353)
107 4e54_B DNA damage-binding prot 97.2 0.011 3.6E-07 55.9 16.3 113 15-132 119-241 (435)
108 2z2n_A Virginiamycin B lyase; 97.2 0.033 1.1E-06 48.1 18.3 104 17-129 142-253 (299)
109 3vgz_A Uncharacterized protein 97.2 0.0092 3.2E-07 53.0 15.0 128 6-143 174-315 (353)
110 2pm7_B Protein transport prote 97.2 0.086 2.9E-06 46.9 21.4 114 15-133 9-134 (297)
111 4gqb_B Methylosome protein 50; 97.2 0.0041 1.4E-07 57.8 13.0 122 8-137 161-295 (344)
112 2ymu_A WD-40 repeat protein; u 97.2 0.08 2.7E-06 50.7 22.4 113 15-139 303-423 (577)
113 4aow_A Guanine nucleotide-bind 97.1 0.0081 2.8E-07 52.9 13.6 111 15-133 215-339 (340)
114 3f3f_A Nucleoporin SEH1; struc 97.1 0.031 1.1E-06 48.3 17.0 123 14-136 56-254 (351)
115 3dw8_B Serine/threonine-protei 97.1 0.0046 1.6E-07 57.1 12.3 132 9-141 87-272 (447)
116 4aow_A Guanine nucleotide-bind 97.0 0.056 1.9E-06 47.5 18.1 117 16-141 172-296 (340)
117 2qc5_A Streptogramin B lactona 97.0 0.11 3.6E-06 44.9 19.2 112 10-129 53-174 (300)
118 3mkq_A Coatomer beta'-subunit; 97.0 0.021 7E-07 57.4 16.4 121 15-141 140-269 (814)
119 2xyi_A Probable histone-bindin 97.0 0.014 4.9E-07 54.9 14.4 128 6-138 171-317 (430)
120 2vdu_B TRNA (guanine-N(7)-)-me 96.9 0.022 7.5E-07 53.8 15.1 122 15-142 195-355 (450)
121 3bws_A Protein LP49; two-domai 96.9 0.027 9.1E-07 51.9 14.9 128 7-143 202-346 (433)
122 2aq5_A Coronin-1A; WD40 repeat 96.8 0.018 6.1E-07 53.2 13.7 116 18-139 37-171 (402)
123 4h5i_A Guanine nucleotide-exch 96.8 0.016 5.5E-07 53.8 13.2 129 5-138 166-307 (365)
124 2hes_X YDR267CP; beta-propelle 96.7 0.064 2.2E-06 48.6 16.3 125 15-139 58-194 (330)
125 2hes_X YDR267CP; beta-propelle 96.7 0.083 2.8E-06 47.8 16.8 120 5-130 3-137 (330)
126 3sfz_A APAF-1, apoptotic pepti 96.7 0.065 2.2E-06 57.0 18.2 115 15-139 615-740 (1249)
127 2j04_B YDR362CP, TAU91; beta p 96.7 0.035 1.2E-06 55.4 15.2 120 15-138 207-349 (524)
128 3dw8_B Serine/threonine-protei 96.7 0.024 8.3E-07 52.2 13.1 126 15-145 177-330 (447)
129 3u4y_A Uncharacterized protein 96.7 0.022 7.5E-07 50.5 12.4 129 6-139 118-262 (331)
130 2z2n_A Virginiamycin B lyase; 96.6 0.11 3.7E-06 44.8 16.5 109 16-134 57-173 (299)
131 2xzm_R RACK1; ribosome, transl 96.6 0.042 1.5E-06 49.8 14.3 116 15-139 162-293 (343)
132 2pm7_B Protein transport prote 96.6 0.091 3.1E-06 46.7 16.0 110 15-132 99-239 (297)
133 1nir_A Nitrite reductase; hemo 96.6 0.045 1.6E-06 54.5 15.3 130 6-141 169-323 (543)
134 4gga_A P55CDC, cell division c 96.5 0.16 5.4E-06 47.4 18.1 128 15-148 189-327 (420)
135 4h5i_A Guanine nucleotide-exch 96.5 0.25 8.7E-06 45.6 19.4 135 11-145 10-180 (365)
136 1rwi_B Serine/threonine-protei 96.5 0.034 1.2E-06 47.8 12.4 113 17-136 151-269 (270)
137 1ri6_A Putative isomerase YBHE 96.5 0.037 1.3E-06 48.5 12.7 134 8-142 121-277 (343)
138 3vu4_A KMHSV2; beta-propeller 96.5 0.036 1.2E-06 51.0 13.2 109 23-139 68-235 (355)
139 4e54_B DNA damage-binding prot 96.5 0.021 7.2E-07 53.8 11.7 115 15-138 164-289 (435)
140 2oaj_A Protein SNI1; WD40 repe 96.5 0.022 7.6E-07 60.3 13.1 128 6-137 89-248 (902)
141 3dm0_A Maltose-binding peripla 96.5 0.058 2E-06 54.1 15.5 120 15-142 517-643 (694)
142 1xip_A Nucleoporin NUP159; bet 96.5 0.096 3.3E-06 51.0 16.4 123 6-142 79-204 (388)
143 1pby_B Quinohemoprotein amine 96.4 0.075 2.5E-06 46.5 14.2 126 5-142 20-174 (337)
144 3dwl_C Actin-related protein 2 96.3 0.02 7E-07 51.7 10.0 122 14-139 99-248 (377)
145 1rwi_B Serine/threonine-protei 96.3 0.094 3.2E-06 45.0 13.7 112 17-135 25-142 (270)
146 1jmx_B Amine dehydrogenase; ox 96.3 0.093 3.2E-06 46.2 13.9 67 72-141 267-335 (349)
147 2oaj_A Protein SNI1; WD40 repe 96.2 0.064 2.2E-06 56.8 14.8 115 11-134 13-132 (902)
148 3bg1_A Protein SEC13 homolog; 96.2 0.17 5.9E-06 45.4 15.7 114 15-133 13-138 (316)
149 3iz6_a 40S ribosomal protein R 96.2 0.18 6.2E-06 46.5 16.1 117 16-138 206-336 (380)
150 1qks_A Cytochrome CD1 nitrite 96.1 0.17 5.8E-06 51.2 16.4 81 6-92 187-277 (567)
151 2j04_B YDR362CP, TAU91; beta p 96.0 0.1 3.5E-06 52.0 14.3 115 16-137 267-392 (524)
152 1qks_A Cytochrome CD1 nitrite 96.0 0.087 3E-06 53.3 13.9 116 21-139 395-546 (567)
153 3fm0_A Protein CIAO1; WDR39,SG 96.0 0.2 6.8E-06 45.6 15.1 115 15-134 61-184 (345)
154 1ri6_A Putative isomerase YBHE 95.9 0.046 1.6E-06 48.0 10.2 114 25-144 4-131 (343)
155 1q7f_A NHL, brain tumor CG1071 95.9 0.26 8.7E-06 42.9 15.0 113 17-138 78-200 (286)
156 2qc5_A Streptogramin B lactona 95.8 0.56 1.9E-05 40.2 16.3 106 16-129 104-216 (300)
157 1jmx_B Amine dehydrogenase; ox 95.7 0.14 4.8E-06 45.0 12.5 128 5-141 30-185 (349)
158 3u4y_A Uncharacterized protein 95.6 0.18 6.2E-06 44.4 12.9 110 25-143 9-129 (331)
159 2oiz_A Aromatic amine dehydrog 95.6 0.068 2.3E-06 49.9 10.4 108 25-141 15-151 (361)
160 1q7f_A NHL, brain tumor CG1071 95.6 0.55 1.9E-05 40.8 15.6 112 17-139 31-158 (286)
161 2oit_A Nucleoporin 214KDA; NH2 95.5 0.28 9.5E-06 47.1 14.8 128 10-138 87-229 (434)
162 2w18_A PALB2, fancn, partner a 95.5 0.23 7.8E-06 48.2 14.0 133 4-140 74-221 (356)
163 1nr0_A Actin interacting prote 95.5 0.34 1.2E-05 47.9 15.6 117 15-139 59-187 (611)
164 3sjl_D Methylamine dehydrogena 95.4 0.11 3.8E-06 50.6 11.6 109 24-141 43-179 (386)
165 4ggc_A P55CDC, cell division c 95.4 1.2 4E-05 38.4 22.9 107 19-134 29-141 (318)
166 1kb0_A Quinohemoprotein alcoho 95.4 0.11 3.9E-06 53.2 12.1 137 7-143 56-211 (677)
167 2ad6_A Methanol dehydrogenase 95.3 0.23 8E-06 49.9 14.1 139 6-144 40-198 (571)
168 3bg1_A Protein SEC13 homolog; 95.3 0.089 3E-06 47.3 9.9 111 15-132 103-248 (316)
169 1kv9_A Type II quinohemoprotei 95.3 0.07 2.4E-06 54.7 10.2 135 7-141 45-197 (668)
170 1pby_B Quinohemoprotein amine 95.0 0.27 9.3E-06 42.8 11.8 113 26-143 2-136 (337)
171 3g4e_A Regucalcin; six bladed 94.9 0.73 2.5E-05 41.0 14.7 68 73-140 161-238 (297)
172 2mad_H Methylamine dehydrogena 94.9 0.31 1.1E-05 46.1 12.8 67 72-142 278-362 (373)
173 2dg1_A DRP35, lactonase; beta 94.9 0.49 1.7E-05 42.0 13.4 109 15-131 86-213 (333)
174 1yiq_A Quinohemoprotein alcoho 94.9 0.26 9.1E-06 50.6 13.1 136 6-141 48-202 (689)
175 2oit_A Nucleoporin 214KDA; NH2 94.9 0.27 9.2E-06 47.2 12.4 119 7-132 137-279 (434)
176 3c75_H MADH, methylamine dehyd 94.7 0.19 6.5E-06 49.4 11.1 109 24-141 83-219 (426)
177 1pjx_A Dfpase, DIISOPROPYLFLUO 94.7 0.31 1.1E-05 42.6 11.4 100 27-131 189-299 (314)
178 2dg1_A DRP35, lactonase; beta 94.4 0.94 3.2E-05 40.1 13.9 109 18-133 47-173 (333)
179 1pjx_A Dfpase, DIISOPROPYLFLUO 94.2 1.5 5E-05 38.2 14.7 106 16-130 71-206 (314)
180 3scy_A Hypothetical bacterial 94.2 2.1 7.2E-05 38.4 16.2 123 17-140 101-253 (361)
181 2mad_H Methylamine dehydrogena 93.9 0.76 2.6E-05 43.4 13.1 108 25-142 32-168 (373)
182 2j04_A TAU60, YPL007P, hypothe 93.9 1.1 3.8E-05 46.1 15.0 110 17-134 131-257 (588)
183 1npe_A Nidogen, entactin; glyc 93.8 2.7 9.2E-05 36.4 15.7 117 17-141 123-248 (267)
184 2qe8_A Uncharacterized protein 93.8 3.3 0.00011 37.7 16.8 122 5-138 8-161 (343)
185 2oiz_A Aromatic amine dehydrog 93.7 0.2 6.8E-06 46.6 8.5 60 72-138 265-343 (361)
186 3f7f_A Nucleoporin NUP120; nuc 93.5 0.078 2.7E-06 55.9 5.8 101 14-141 160-260 (729)
187 3hfq_A Uncharacterized protein 93.5 0.87 3E-05 40.6 12.0 120 18-140 143-283 (347)
188 1mda_H Methylamine dehydrogena 93.4 0.62 2.1E-05 44.6 11.6 70 69-142 272-357 (368)
189 3sjl_D Methylamine dehydrogena 93.3 0.61 2.1E-05 45.3 11.4 73 72-148 291-380 (386)
190 3c75_H MADH, methylamine dehyd 93.3 0.3 1E-05 47.9 9.3 67 72-142 330-414 (426)
191 2ojh_A Uncharacterized protein 93.2 3.3 0.00011 34.6 15.0 112 11-129 37-158 (297)
192 3b7f_A Glycosyl hydrolase, BNR 93.1 1.6 5.4E-05 40.7 13.6 104 25-135 22-153 (394)
193 1flg_A Protein (quinoprotein e 93.0 1.3 4.6E-05 44.6 13.8 129 6-140 44-202 (582)
194 3scy_A Hypothetical bacterial 92.8 2.4 8.1E-05 38.0 13.9 122 18-140 157-304 (361)
195 1kb0_A Quinohemoprotein alcoho 92.4 2.2 7.4E-05 43.7 14.7 131 6-142 148-357 (677)
196 2ghs_A AGR_C_1268P; regucalcin 92.4 0.91 3.1E-05 41.2 10.7 112 9-130 83-209 (326)
197 1w6s_A Methanol dehydrogenase 92.4 1.2 4.1E-05 45.4 12.6 135 6-144 40-204 (599)
198 3g4e_A Regucalcin; six bladed 92.3 1.2 4.1E-05 39.6 11.1 114 7-129 45-178 (297)
199 4gq1_A NUP37; propeller, trans 92.2 0.86 2.9E-05 42.3 10.5 106 28-140 104-227 (393)
200 3hfq_A Uncharacterized protein 91.7 5.3 0.00018 35.4 14.8 124 15-140 85-231 (347)
201 3fvz_A Peptidyl-glycine alpha- 91.4 5.6 0.00019 35.7 14.7 109 18-131 198-322 (329)
202 2ad6_A Methanol dehydrogenase 91.3 3.6 0.00012 41.2 14.5 138 6-143 135-347 (571)
203 2fp8_A Strictosidine synthase; 90.8 4.4 0.00015 36.2 13.3 65 73-139 197-276 (322)
204 2j04_A TAU60, YPL007P, hypothe 90.6 7.3 0.00025 40.1 16.2 119 9-131 171-297 (588)
205 1kv9_A Type II quinohemoprotei 90.3 2.7 9.2E-05 42.8 12.8 129 7-141 87-289 (668)
206 3e5z_A Putative gluconolactona 90.0 3.4 0.00011 36.1 11.6 106 19-133 175-288 (296)
207 2w18_A PALB2, fancn, partner a 89.9 5.6 0.00019 38.4 13.9 75 64-138 182-276 (356)
208 4gq2_M Nucleoporin NUP120; bet 89.8 1 3.5E-05 48.4 9.5 97 24-143 180-278 (950)
209 2ghs_A AGR_C_1268P; regucalcin 89.8 5.9 0.0002 35.8 13.4 100 20-128 53-167 (326)
210 2hz6_A Endoplasmic reticulum t 89.8 0.1 3.5E-06 49.0 1.5 125 5-141 28-159 (369)
211 3no2_A Uncharacterized protein 89.4 3.2 0.00011 37.1 11.2 128 5-141 24-164 (276)
212 2hqs_A Protein TOLB; TOLB, PAL 89.3 6.5 0.00022 36.8 13.7 112 14-134 221-347 (415)
213 1mda_H Methylamine dehydrogena 89.1 2 6.9E-05 41.0 10.1 106 24-141 30-165 (368)
214 4gq1_A NUP37; propeller, trans 89.1 5.3 0.00018 36.9 12.7 125 10-137 10-181 (393)
215 1w6s_A Methanol dehydrogenase 88.9 11 0.00036 38.4 15.8 136 7-142 142-353 (599)
216 1flg_A Protein (quinoprotein e 88.7 5.9 0.0002 39.8 13.7 80 7-92 89-195 (582)
217 1yiq_A Quinohemoprotein alcoho 88.6 4.4 0.00015 41.5 12.9 129 7-141 91-294 (689)
218 3fvz_A Peptidyl-glycine alpha- 88.5 13 0.00045 33.2 15.5 115 16-138 24-181 (329)
219 2ece_A 462AA long hypothetical 88.3 1.9 6.6E-05 43.1 9.6 132 7-141 59-247 (462)
220 3no2_A Uncharacterized protein 88.2 6.1 0.00021 35.3 12.1 107 25-142 5-118 (276)
221 2ecf_A Dipeptidyl peptidase IV 87.9 2.2 7.4E-05 42.5 9.8 70 65-137 111-187 (741)
222 2ojh_A Uncharacterized protein 87.5 11 0.00038 31.2 14.4 115 11-134 124-261 (297)
223 3dr2_A Exported gluconolactona 86.9 3.6 0.00012 36.5 9.7 86 27-120 201-297 (305)
224 2hz6_A Endoplasmic reticulum t 86.1 0.41 1.4E-05 44.8 3.2 106 24-145 91-206 (369)
225 2z3z_A Dipeptidyl aminopeptida 85.7 6 0.00021 39.0 11.5 111 16-134 82-247 (706)
226 2be1_A Serine/threonine-protei 83.9 1.5 5.1E-05 41.9 6.0 113 24-142 9-141 (339)
227 2hqs_A Protein TOLB; TOLB, PAL 83.2 20 0.00067 33.5 13.5 91 35-134 159-259 (415)
228 4fhn_B Nucleoporin NUP120; pro 82.6 1.3 4.5E-05 48.2 5.6 97 24-143 182-280 (1139)
229 1xfd_A DIP, dipeptidyl aminope 82.6 5.8 0.0002 39.1 9.9 28 65-92 116-145 (723)
230 1jof_A Carboxy-CIS,CIS-muconat 81.9 29 0.00099 31.3 13.7 97 33-134 117-229 (365)
231 2fp8_A Strictosidine synthase; 81.5 20 0.00069 31.8 12.3 98 27-130 198-312 (322)
232 3hrp_A Uncharacterized protein 78.2 46 0.0016 31.3 14.9 112 16-133 219-356 (409)
233 3amr_A 3-phytase; beta-propell 77.2 51 0.0017 31.7 14.2 114 27-142 145-275 (355)
234 3e5z_A Putative gluconolactona 75.6 7.3 0.00025 33.8 7.3 58 75-135 43-103 (296)
235 2z3z_A Dipeptidyl aminopeptida 75.3 15 0.00052 36.1 10.3 56 81-136 235-298 (706)
236 1xip_A Nucleoporin NUP159; bet 73.1 67 0.0023 30.8 14.6 107 18-135 40-159 (388)
237 3ei3_A DNA damage-binding prot 72.2 45 0.0016 36.6 14.0 121 5-131 816-957 (1158)
238 1k32_A Tricorn protease; prote 71.8 15 0.00052 38.7 9.8 71 63-133 379-463 (1045)
239 3dr2_A Exported gluconolactona 71.0 17 0.00059 31.9 8.7 106 17-133 87-226 (305)
240 3o4h_A Acylamino-acid-releasin 70.9 37 0.0013 32.6 11.7 113 15-136 21-146 (582)
241 1fwx_A Nitrous oxide reductase 69.2 10 0.00035 39.0 7.5 86 54-141 271-381 (595)
242 1k32_A Tricorn protease; prote 69.1 47 0.0016 34.9 12.9 113 17-138 297-416 (1045)
243 1xfd_A DIP, dipeptidyl aminope 68.0 7.6 0.00026 38.3 6.2 117 16-139 17-151 (723)
244 2ecf_A Dipeptidyl peptidase IV 67.3 42 0.0014 33.1 11.4 71 17-92 110-183 (741)
245 2ece_A 462AA long hypothetical 65.6 11 0.00038 37.6 6.8 70 72-141 95-183 (462)
246 3b7f_A Glycosyl hydrolase, BNR 64.0 53 0.0018 30.2 10.9 108 16-126 55-204 (394)
247 1z68_A Fibroblast activation p 62.2 16 0.00054 36.2 7.2 106 20-136 20-144 (719)
248 3ei3_A DNA damage-binding prot 62.1 80 0.0027 34.7 13.3 137 4-148 590-743 (1158)
249 2p4o_A Hypothetical protein; p 61.4 85 0.0029 27.6 12.9 117 6-132 22-148 (306)
250 4a5s_A Dipeptidyl peptidase 4 60.8 53 0.0018 33.0 10.9 110 18-136 19-146 (740)
251 1npe_A Nidogen, entactin; glyc 59.8 81 0.0028 26.8 17.3 107 17-133 80-200 (267)
252 1ijq_A LDL receptor, low-densi 57.9 1E+02 0.0036 27.5 16.2 114 19-139 123-246 (316)
253 1q47_A Semaphorin 3A; beta pro 54.8 24 0.00083 35.2 7.1 61 28-88 424-489 (495)
254 3kya_A Putative phosphatase; s 54.6 1.7E+02 0.0059 29.0 13.7 101 26-129 205-339 (496)
255 2xbg_A YCF48-like protein; pho 53.6 51 0.0017 29.7 8.6 109 15-129 204-320 (327)
256 2gop_A Trilobed protease; beta 53.2 29 0.001 30.2 6.7 55 82-138 86-168 (347)
257 3uky_C Nuclear CAP-binding pro 51.0 3.7 0.00013 26.1 0.3 9 313-321 15-23 (32)
258 1t9f_A Protein 1D10; structura 50.6 12 0.00043 32.4 3.8 70 77-146 7-97 (187)
259 3o4h_A Acylamino-acid-releasin 50.0 33 0.0011 33.0 7.0 66 63-129 195-274 (582)
260 1jof_A Carboxy-CIS,CIS-muconat 49.7 1.4E+02 0.0048 26.6 15.4 116 16-133 145-294 (365)
261 2woz_A Kelch repeat and BTB do 48.2 1.4E+02 0.0048 26.1 12.7 105 21-133 154-289 (318)
262 3v65_B Low-density lipoprotein 44.8 1.9E+02 0.0065 26.7 16.0 69 71-139 256-326 (386)
263 2vpj_A Kelch-like protein 12; 40.5 1.8E+02 0.006 25.0 13.6 106 20-133 154-280 (301)
264 3pe7_A Oligogalacturonate lyas 40.3 1.9E+02 0.0065 25.3 11.2 60 33-92 45-113 (388)
265 2p9w_A MAL S 1 allergenic prot 39.1 2E+02 0.0069 27.2 10.5 117 10-132 4-169 (334)
266 1zgk_A Kelch-like ECH-associat 37.9 2E+02 0.0069 25.0 12.5 108 20-133 163-289 (308)
267 2uvk_A YJHT; unknown function, 37.3 2.2E+02 0.0075 25.2 13.8 94 22-119 16-126 (357)
268 3c5m_A Oligogalacturonate lyas 36.7 2.1E+02 0.0071 24.9 9.7 20 72-91 92-112 (396)
269 2p9w_A MAL S 1 allergenic prot 35.0 2.5E+02 0.0084 26.6 10.4 73 72-144 24-125 (334)
270 2xbg_A YCF48-like protein; pho 34.7 2.5E+02 0.0085 25.1 13.4 116 15-135 35-157 (327)
271 3hrp_A Uncharacterized protein 34.5 2.8E+02 0.0097 25.7 13.5 102 26-132 183-299 (409)
272 3ii7_A Kelch-like protein 7; p 34.2 2.3E+02 0.0077 24.4 14.1 67 67-133 195-274 (306)
273 2p4o_A Hypothetical protein; p 33.1 2.4E+02 0.0083 24.5 16.5 118 8-131 64-198 (306)
274 2vpj_A Kelch-like protein 12; 33.0 2.3E+02 0.008 24.2 14.6 122 6-133 93-233 (301)
275 2qe8_A Uncharacterized protein 32.9 2.6E+02 0.0089 24.8 12.9 71 17-92 68-156 (343)
276 3sre_A PON1, serum paraoxonase 32.7 59 0.002 30.8 5.7 54 73-130 233-297 (355)
277 3sov_A LRP-6, low-density lipo 32.3 2.8E+02 0.0096 24.9 15.8 66 72-139 177-246 (318)
278 4asc_A Kelch repeat and BTB do 31.8 2.6E+02 0.0088 24.3 11.4 66 67-132 143-222 (315)
279 1n7d_A LDL receptor, low-densi 31.0 92 0.0031 31.8 7.1 68 72-139 551-622 (699)
280 2xn4_A Kelch-like protein 2; s 30.6 2.6E+02 0.0088 24.0 13.7 107 19-133 149-278 (302)
281 4fww_A Macrophage-stimulating 29.9 1.4E+02 0.0046 29.5 8.0 61 28-89 421-482 (527)
282 3nvx_A Protein A39; beta-prope 29.2 2.2E+02 0.0077 27.6 9.1 65 62-129 10-78 (383)
283 3pe7_A Oligogalacturonate lyas 28.9 1.5E+02 0.0051 26.0 7.4 67 73-139 48-119 (388)
284 4gz8_A Semaphorin-3A; multi-do 28.4 58 0.002 33.8 5.1 65 27-91 431-500 (667)
285 2bkl_A Prolyl endopeptidase; m 26.8 3.2E+02 0.011 26.9 10.2 115 15-133 271-399 (695)
286 2xdw_A Prolyl endopeptidase; a 26.0 4.8E+02 0.016 25.7 12.8 68 63-133 336-416 (710)
287 2bw2_A Bypass of forespore C; 25.3 8.3 0.00028 32.7 -1.6 40 2-41 42-87 (140)
288 3azo_A Aminopeptidase; POP fam 25.0 4.6E+02 0.016 25.1 12.5 109 16-131 24-170 (662)
289 3tc9_A Hypothetical hydrolase; 24.7 4.4E+02 0.015 24.7 12.4 96 27-130 192-300 (430)
290 3amr_A 3-phytase; beta-propell 24.3 4.6E+02 0.016 24.9 10.4 91 5-98 169-275 (355)
291 4asc_A Kelch repeat and BTB do 24.1 3.5E+02 0.012 23.4 12.4 109 19-133 142-279 (315)
292 3q6k_A 43.2 kDa salivary prote 22.6 5.1E+02 0.017 24.7 10.4 126 6-131 135-306 (381)
293 3c5m_A Oligogalacturonate lyas 22.5 2.6E+02 0.0089 24.2 7.7 58 82-139 61-119 (396)
294 3mal_A Stromal cell-derived fa 22.3 84 0.0029 27.5 4.3 72 76-147 17-109 (199)
295 1zgk_A Kelch-like ECH-associat 22.2 3.8E+02 0.013 23.1 11.8 107 20-132 65-194 (308)
296 1z68_A Fibroblast activation p 21.4 67 0.0023 31.6 3.9 61 74-134 28-102 (719)
297 3pbp_A Nucleoporin NUP82; beta 21.3 3.2E+02 0.011 27.1 8.6 59 27-88 314-386 (452)
298 3oky_A Plexin-A2; transmembran 21.2 1.5E+02 0.0052 30.8 6.6 63 28-91 415-480 (681)
299 2woz_A Kelch repeat and BTB do 20.7 4.1E+02 0.014 23.0 11.1 52 67-118 153-213 (318)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.75 E-value=2.6e-06 Score=79.71 Aligned_cols=125 Identities=15% Similarity=0.192 Sum_probs=90.2
Q ss_pred eeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECCe-EEEEc
Q psy2153 12 NKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNK-IHVVD 87 (325)
Q Consensus 12 IkL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gnk-I~VIn 87 (325)
+.-.+.|.++.+. ++++++|-.||+|.||+-..+.. +...+....|. ..+|+|+.... ..|-.|+.+. |.+.|
T Consensus 79 ~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~--~~~~~~~~~~H-~~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 79 VQTEAGVADLTWVGERGILVASDSGAVELWELDENET--LIVSKFCKYEH-DDIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp EEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSS--CEEEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCc--eeEeeccccCC-CCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3345789999986 57899999999999998544321 11111122243 47899998774 4677777754 99999
Q ss_pred CCCC---ceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 88 PKSL---KSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 88 ~~Tl---ksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
.++. +.|..|. ..|++++.+.. .+.++...+.+|++||..+.+.+..+....
T Consensus 156 ~~~~~~~~~~~~h~---~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 212 (344)
T 4gqb_B 156 LAQQVVLSSYRAHA---AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA 212 (344)
T ss_dssp TTTTEEEEEECCCS---SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---
T ss_pred CCCCcEEEEEcCcC---CceEEEEecCCCCCceeeeccccccccccccccceeeeeecce
Confidence 9988 4555555 78999998744 589999999999999999999988876543
No 2
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.43 E-value=0.0001 Score=65.51 Aligned_cols=119 Identities=13% Similarity=0.151 Sum_probs=87.6
Q ss_pred CceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEc
Q psy2153 16 DTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVD 87 (325)
Q Consensus 16 dsVl~I~~~~-----~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn 87 (325)
+.|.||.+.. +.+++|-.||+|.+|+-...+. .....+. + ...+|+++.... +.|..++.+ .|.+.|
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~-~-h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQ-M-HTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---EEEEEEE-E-CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---eeEEEec-c-ccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 7999999986 4688888899999998654221 0002222 2 247899998874 467777765 599999
Q ss_pred CCCCc--eeEecCCCCCceeEEEE--eCCe-EEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 88 PKSLK--SFDAHPRRESQVRQMTW--AGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 88 ~~Tlk--sf~~~~~~~~~V~~Ma~--~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
.++.+ .+..| ...|+++++ ..++ ..++...+..|++||..+.+.++.++...
T Consensus 115 ~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 115 LSSNQAIQIAQH---DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp TTTTEEEEEEEC---SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred cCCCCceeeccc---cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 99883 33333 377999998 6555 56677889999999999999999888654
No 3
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.43 E-value=3e-05 Score=69.10 Aligned_cols=118 Identities=10% Similarity=0.085 Sum_probs=85.3
Q ss_pred CCceeeeEEeCC------eEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC---CEEEEEECC-eEE
Q psy2153 15 LDTALPPVHVQG------RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYKN-KIH 84 (325)
Q Consensus 15 ~dsVl~I~~~~~------~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~---~~LW~g~gn-kI~ 84 (325)
.+.|.++.+..+ .+++|-.||+|.+|+-... +....+. + ...+|+++.... ..|.+|+.+ .|.
T Consensus 69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~-----~~~~~~~-~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~ 141 (366)
T 3k26_A 69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM-----QCIKHYV-G-HGNAINELKFHPRDPNLLLSVSKDHALR 141 (366)
T ss_dssp TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC-----CEEEEEE-S-CCSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc-----eEeeeec-C-CCCcEEEEEECCCCCCEEEEEeCCCeEE
Confidence 467999998755 7888999999999974331 1123333 2 247999998864 467777764 599
Q ss_pred EEcCCCCceeEec---CCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 85 VVDPKSLKSFDAH---PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 85 VIn~~Tlksf~~~---~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+.|.++.+....- ......|++++++.+| ..++...+..|++||..+.+.++.+.
T Consensus 142 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 142 LWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp EEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred EEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccc
Confidence 9999988433222 3455889999998655 56677789999999999988776554
No 4
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.39 E-value=9.6e-05 Score=69.59 Aligned_cols=181 Identities=17% Similarity=0.227 Sum_probs=109.3
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCe-EEEEcCCCCc--
Q psy2153 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNK-IHVVDPKSLK-- 92 (325)
Q Consensus 16 dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnk-I~VIn~~Tlk-- 92 (325)
+.|.|+.+.++.+++|-.||+|.+|+.... +....+. + ...+|+|+..-++.+..|+.+. |.+.|.++.+
T Consensus 200 ~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~-----~~~~~~~-~-~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 200 STVRCMHLHEKRVVSGSRDATLRVWDIETG-----QCLHVLM-G-HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSEEEEEESSSC-----CEEEEEE-C-CSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEE
T ss_pred CcEEEEEecCCEEEEEeCCCEEEEEECCCC-----cEEEEEc-C-CcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEe
Confidence 578888888888888888888888874432 1112232 2 2478999888667788777754 9999988773
Q ss_pred -eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecchhhhhhcccccccccceeeccccccccccC
Q psy2153 93 -SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPF 171 (325)
Q Consensus 93 -sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~ 171 (325)
.+..|. ..|.++...+.. -++...+..|++||..+.+.+..+.-.......+ .+. -+.+.+...|
T Consensus 273 ~~~~~~~---~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~---~~~-~~~l~~~~~d------ 338 (445)
T 2ovr_B 273 HTLQGHT---NRVYSLQFDGIH-VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM---ELK-DNILVSGNAD------ 338 (445)
T ss_dssp EEECCCS---SCEEEEEECSSE-EEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE---EEE-TTEEEEEETT------
T ss_pred EEecCCC---CceEEEEECCCE-EEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE---EEe-CCEEEEEeCC------
Confidence 444443 678888886544 4577778999999999999888775432211111 000 0011111111
Q ss_pred ccccCCCccccccccccccceeeeeccCCCCCCCcceeEEEEEEeeCCeeeEeCCCCcc
Q psy2153 172 GWYANNPADILESFTVCQSHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASGKA 230 (325)
Q Consensus 172 ~~~~~~p~~~~~~f~~~~~~~~ci~~vp~~~~~~~~~~riTsLl~~~~~LWiGTs~G~~ 230 (325)
..++.|++-. -.|+..+.+... ..-.|+++-...+.|..|+..|.+
T Consensus 339 --------g~i~vwd~~~--~~~~~~~~~~~~---~~~~v~~~~~~~~~l~s~~~dg~v 384 (445)
T 2ovr_B 339 --------STVKIWDIKT--GQCLQTLQGPNK---HQSAVTCLQFNKNFVITSSDDGTV 384 (445)
T ss_dssp --------SCEEEEETTT--CCEEEEECSTTS---CSSCEEEEEECSSEEEEEETTSEE
T ss_pred --------CeEEEEECCC--CcEEEEEccCCC---CCCCEEEEEECCCEEEEEeCCCeE
Confidence 1233333311 123344433211 124578888888889999999973
No 5
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.31 E-value=0.00011 Score=64.18 Aligned_cols=125 Identities=13% Similarity=0.133 Sum_probs=87.3
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeE-EEcCCCCCceeeeeee----CCEEEEEECC-eEEEE
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAV----YNKVWCGYKN-KIHVV 86 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~-I~LG~~~~PV~cml~v----~~~LW~g~gn-kI~VI 86 (325)
+++|+||.+. .+.+++|-.||+|.+|+-.... ...+. ..+-....+|+++... ++.|..|+.+ .|.+.
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT----SNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS----CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred ccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC----CcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 5799999986 3468888899999999865422 11111 2222234799999876 3567777775 49999
Q ss_pred cCCCC---------ceeEecCCCCCceeEEEEeCC--e-EEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 87 DPKSL---------KSFDAHPRRESQVRQMTWAGD--G-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 87 n~~Tl---------ksf~~~~~~~~~V~~Ma~~G~--G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
|.++. +...........|+.+++... + ..++...+..|++||..+.+.++.+.+...
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 155 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSE 155 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEE
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccc
Confidence 98774 112222234478999999864 4 566778899999999999998887776543
No 6
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.29 E-value=0.00022 Score=67.25 Aligned_cols=116 Identities=16% Similarity=0.147 Sum_probs=79.1
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCe-EEEEcCCCCcee
Q psy2153 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNK-IHVVDPKSLKSF 94 (325)
Q Consensus 16 dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnk-I~VIn~~Tlksf 94 (325)
++|+|+.+.++.+++|-.||+|.+|+-.... ..-.+-....+|.++..-++.+..|+.+. |.+.|.++.+..
T Consensus 174 ~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 174 GSVLCLQYDERVIITGSSDSTVRVWDVNTGE-------MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp SCEEEEECCSSEEEEEETTSCEEEEESSSCC-------EEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCC
T ss_pred CcEEEEEECCCEEEEEcCCCeEEEEECCCCc-------EEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCc
Confidence 4677777766677777777777777643211 12222223478999988888888888754 999998876322
Q ss_pred ---EecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 95 ---DAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 95 ---~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.........|+++...+..+ ++...+..|++||..+.+.++.+.
T Consensus 247 ~~~~~~~~~~~~v~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDFDDKYI-VSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp EEEEEECCCSSCEEEEEEETTEE-EEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeeeEecCCCCcEEEEEeCCCEE-EEEeCCCeEEEEECCcCcEEEEEc
Confidence 22233447889988876544 577789999999999888766553
No 7
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.27 E-value=0.00021 Score=65.39 Aligned_cols=132 Identities=11% Similarity=0.147 Sum_probs=93.0
Q ss_pred CccceeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC---CEEEEEEC-
Q psy2153 7 TPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK- 80 (325)
Q Consensus 7 ~~L~~IkL~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~---~~LW~g~g- 80 (325)
+++..+..++.|.++.+.. ..+++|-.||+|.+|+-..... .......+-....+|+++.... +.|..++.
T Consensus 59 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 135 (416)
T 2pm9_A 59 KPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN---AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN 135 (416)
T ss_dssp SCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS---CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS
T ss_pred cEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc---cccchhhccCCccceEEEEEcCCCCCEEEEEcCC
Confidence 3556666778999999863 4678888999999998544210 1113334433357899998873 35666665
Q ss_pred CeEEEEcCCCCc-------eeEe--cCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 81 NKIHVVDPKSLK-------SFDA--HPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 81 nkI~VIn~~Tlk-------sf~~--~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
+.|.+.|..+.+ .+.. .......|++++.... .+.++...+..|++||..+.+.+..+...
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 207 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYT 207 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCC
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecc
Confidence 459999988764 1221 1234578999999865 47888899999999999999999888774
No 8
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.26 E-value=0.00095 Score=58.60 Aligned_cols=130 Identities=12% Similarity=0.061 Sum_probs=90.0
Q ss_pred cceeeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEE
Q psy2153 9 YPLNKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIH 84 (325)
Q Consensus 9 L~~IkL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~ 84 (325)
++...-++.|.++.+. +++.+++-.||+|.+|+....+. ......+.......+|+++.... ..|.+++. +.|.
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTC--CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred ceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCc--eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 3445557899999986 44556656699999999765432 22334444333357899998884 46777776 5699
Q ss_pred EEcCCCCc--eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 85 VVDPKSLK--SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 85 VIn~~Tlk--sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
+.+.++.+ ...........|++++...++ ..++...+..|++||..+.+.++.+..
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 99998873 222222234779999998665 555677889999999999998887764
No 9
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.00028 Score=61.56 Aligned_cols=121 Identities=19% Similarity=0.246 Sum_probs=86.9
Q ss_pred ccceee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee---CCEEEEEECC-e
Q psy2153 8 PYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKN-K 82 (325)
Q Consensus 8 ~L~~Ik-L~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v---~~~LW~g~gn-k 82 (325)
.+..++ -.+.|.++.+.++.++++-.||+|.+|+. + .....+.. ...+|.++... ++.+..++.+ .
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~---~----~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~ 166 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKE---G----SLVYNLQA--HNASVWDAKVVSFSENKFLTASADKT 166 (313)
T ss_dssp C-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEET---T----EEEEEEEC--CSSCEEEEEEEETTTTEEEEEETTSC
T ss_pred cccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcC---C----cEEEeccc--CCCceeEEEEccCCCCEEEEEECCCC
Confidence 344443 34689999999999999999999999971 1 11122332 24789888765 4678887775 5
Q ss_pred EEEEcCCCC-ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 83 IHVVDPKSL-KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 83 I~VIn~~Tl-ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
|.+.|.... +.+.. .....|++++.+..+-.++...+..|++||..+.+.++.+.
T Consensus 167 i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 167 IKLWQNDKVIKTFSG--IHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EEEEETTEEEEEECS--SCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEecCceEEEEec--cCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhh
Confidence 999994444 44443 13478999999877778899999999999999988776654
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.23 E-value=0.0003 Score=65.33 Aligned_cols=121 Identities=17% Similarity=0.219 Sum_probs=83.3
Q ss_pred eCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcC
Q psy2153 13 KILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDP 88 (325)
Q Consensus 13 kL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~ 88 (325)
.-.+.|.++.+. +++++++-.+|+|.+|+-..... .........|. ..+|+|+.... ..|-.|+.+ .|.+.|.
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~--~~~~~~~~~~h-~~~V~~v~~spdg~~l~sgs~dg~v~iwd~ 168 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES--LLVNKFAKYEH-DDIVKTLSVFSDGTQAVSGGKDFSVKVWDL 168 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC----------CCCCEEECCC-SSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce--eEEEeeccCCC-CCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 445689999986 67899999999999986433211 01111222232 47899998774 467667765 4999999
Q ss_pred CCCc---eeEecCCCCCceeEEEEe--CCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 89 KSLK---SFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 89 ~Tlk---sf~~~~~~~~~V~~Ma~~--G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
++.+ .|..|. ..|++++.. +.++.++...+.+|++||..+.+.+..+.
T Consensus 169 ~~~~~~~~~~~h~---~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 169 SQKAVLKSYNAHS---SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRID 221 (357)
T ss_dssp TTTEEEEEECCCS---SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCC
T ss_pred CCCcEEEEEcCCC---CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeee
Confidence 9883 455554 779999986 44588999999999999998887665543
No 11
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.22 E-value=0.00065 Score=63.77 Aligned_cols=118 Identities=15% Similarity=0.082 Sum_probs=82.3
Q ss_pred ceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC-CEEEEEECCe-EEEEcCCCCcee
Q psy2153 17 TALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYKNK-IHVVDPKSLKSF 94 (325)
Q Consensus 17 sVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~-~~LW~g~gnk-I~VIn~~Tlksf 94 (325)
.+.|+.+.++.++.|-.||+|.+|+-.... ....+.....+|+++.... +.|..|+.+. |.+.|.++.+..
T Consensus 124 v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~-------~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~ 196 (464)
T 3v7d_B 124 VITCLQFEDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT 196 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cEEEEEECCCEEEEEcCCCcEEEEECCCCc-------EEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEE
Confidence 368889999999999999999999843321 1223322348999998875 4777777754 999999988433
Q ss_pred EecCCCCCceeEEEEe---CCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 95 DAHPRRESQVRQMTWA---GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 95 ~~~~~~~~~V~~Ma~~---G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
..-......|++++.. .....++...+.+|++||..+.+.+......
T Consensus 197 ~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 2222234789988876 3357778889999999999998877665544
No 12
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.22 E-value=0.0012 Score=57.83 Aligned_cols=128 Identities=13% Similarity=0.076 Sum_probs=90.5
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcC
Q psy2153 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (325)
Q Consensus 14 L~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~ 88 (325)
-.+.|.++.+.. +.++++-.||+|.+|+-.... ......+.....+|+++.... +.+..++. +.|+++|.
T Consensus 96 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC-----cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 457899999873 468888999999999854321 112223333347899987764 46777776 55999999
Q ss_pred CCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecchhhhh
Q psy2153 89 KSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 146 (325)
Q Consensus 89 ~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v~~ 146 (325)
++.+....-......|++++.+.+| ..++...+..|++||..+.+.++.++....+..
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~ 229 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFS 229 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEE
T ss_pred CCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEE
Confidence 9884332222234789999998666 555667899999999999999998876655444
No 13
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00042 Score=62.80 Aligned_cols=116 Identities=12% Similarity=0.200 Sum_probs=85.3
Q ss_pred eeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCCCCce
Q psy2153 18 ALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLKS 93 (325)
Q Consensus 18 Vl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~Tlks 93 (325)
|.++.+. ++.++++..+|.|.+|+.... .....+. + ...+|+++.... ..|..++. +.|.+++..+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~-----~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEK-----TPTGKLI-G-HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCS-----SCSEEEC-C-CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCC-----ceeeeec-c-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 7777764 778999999999999996542 2223333 2 247899988774 46788876 4599999888732
Q ss_pred eEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 94 FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 94 f~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
...-......|++++...+|..++...+..|++||..+.+.++.+..
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 22222234789999999888888899999999999999887766553
No 14
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.15 E-value=0.00053 Score=64.50 Aligned_cols=120 Identities=19% Similarity=0.081 Sum_probs=94.0
Q ss_pred CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECC-eEEEEcCCCCc
Q psy2153 14 ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-KIHVVDPKSLK 92 (325)
Q Consensus 14 L~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gn-kI~VIn~~Tlk 92 (325)
-...+.|+.+.++.++.|-.||+|.+|+-..... .-.+-....+|.++..-++.|..|+.+ .|.+.|.++.+
T Consensus 118 ~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~-------~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 118 DDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKC-------LRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE 190 (445)
T ss_dssp TTSCEEEEEEETTEEEEEETTSCEEEEETTTCCE-------EEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred CCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcE-------EEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCc
Confidence 3666889999999999999999999999776663 112222347899999999999999986 49999999984
Q ss_pred eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 93 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 93 sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
....-......|+++...+.. .++...+.+|++||..+.+.+..+.-.
T Consensus 191 ~~~~~~~h~~~v~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 191 CIHTLYGHTSTVRCMHLHEKR-VVSGSRDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEEECCCSSCEEEEEEETTE-EEEEETTSEEEEEESSSCCEEEEEECC
T ss_pred EEEEECCCCCcEEEEEecCCE-EEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 332222334789999998755 568889999999999999998888754
No 15
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.00046 Score=61.67 Aligned_cols=117 Identities=12% Similarity=0.082 Sum_probs=82.6
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee----CCEEEEEECC-eEEEEc
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYKN-KIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v----~~~LW~g~gn-kI~VIn 87 (325)
.++|.++.+. .+++++|-.||+|.||+-... .+ .....+-....+|+++... ++.|..|+.+ .|.+.|
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~-~~----~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-TH----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETTSCEEEEEEETT-EE----EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccEEEEEEcCCCCEEEEEECCCcEEEEecCCC-cc----eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 4689999986 446888888999999985421 11 1122333334799999876 5678888875 599999
Q ss_pred CCCCc--eeEecCCCCCceeEEEEeCC---eEEEEEeCCCeEEEEecCccceee
Q psy2153 88 PKSLK--SFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 88 ~~Tlk--sf~~~~~~~~~V~~Ma~~G~---GVWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
.++.+ ...........|+++++... ...++...+..|++||..+.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCC
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCcee
Confidence 88773 33333334578999999865 477788899999999998875443
No 16
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.12 E-value=0.00035 Score=62.02 Aligned_cols=113 Identities=10% Similarity=0.088 Sum_probs=82.3
Q ss_pred cceeeCCCceeeeEEe--CC-eEEEEecCCcEEEEEc-CCCCCCCCCCCeEEEcCC--CCCceeeeeee-CCEEEEEECC
Q psy2153 9 YPLNKILDTALPPVHV--QG-RVVCALADGSVAIFRR-GPDGQWDLSKYHTVTLGL--PHHSVRSLAAV-YNKVWCGYKN 81 (325)
Q Consensus 9 L~~IkL~dsVl~I~~~--~~-~VfVgLANGtLaVF~R-~~~g~WD~~~~~~I~LG~--~~~PV~cml~v-~~~LW~g~gn 81 (325)
.......+.|+++.+. .+ .+++|-.||+|.+|+. ... +...+.. ...+|+++... ++.|..++.+
T Consensus 50 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~--------~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d 121 (342)
T 1yfq_A 50 LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSP--------SFQALTNNEANLGICRICKYGDDKLIAASWD 121 (342)
T ss_dssp EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSS--------SEEECBSCCCCSCEEEEEEETTTEEEEEETT
T ss_pred eeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCC--------ceEeccccCCCCceEEEEeCCCCEEEEEcCC
Confidence 3344556799999986 34 6999999999999975 332 1233433 35789998776 6788877775
Q ss_pred -eEEEEcCCC---------C---ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCc-cce
Q psy2153 82 -KIHVVDPKS---------L---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQH 134 (325)
Q Consensus 82 -kI~VIn~~T---------l---ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T-~e~ 134 (325)
.|.++|.++ . +.+. ....|++|+..+.+ .++...+..|++||..+ .+.
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTK----VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSS----SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTC
T ss_pred CeEEEEcccccccccccccCCeeeEEe----eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccc
Confidence 599999776 3 3333 34789999999999 55668889999999998 543
No 17
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.10 E-value=0.0016 Score=58.41 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=81.4
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
.+.|.+|.+. ...++.|-.||+|.+|+-... ...+.+... ..||+++.... +.|-.|+.+ .|.+.|.+
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~-----~~~~~~~~~--~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQ-----VEVRSIQVT--ETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----EEEEEEECC--SSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCC-----ceeEEeecc--CCcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 4789999986 346888899999999874321 112334433 37999987774 567777775 59999998
Q ss_pred CC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccce
Q psy2153 90 SL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 90 Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~ 134 (325)
+. +.|+.|+ ..|++++....+ .-++...+.+|++||.++.+.
T Consensus 86 ~~~~~~~~~~h~---~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~ 131 (304)
T 2ynn_A 86 TGEKVVDFEAHP---DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (304)
T ss_dssp TCCEEEEEECCS---SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE
T ss_pred CCcEEEEEeCCC---CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc
Confidence 87 4566666 679999998665 667888999999999987643
No 18
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.09 E-value=0.00029 Score=66.37 Aligned_cols=123 Identities=15% Similarity=0.168 Sum_probs=90.8
Q ss_pred ccceeeC-CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECC-eEEE
Q psy2153 8 PYPLNKI-LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-KIHV 85 (325)
Q Consensus 8 ~L~~IkL-~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gn-kI~V 85 (325)
.++.++- .+.|.++.+.++.+++|-.||+|.+|+....... .......|. ..+|+++..-++.|..|+.+ .|.+
T Consensus 205 ~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~---~~~~~~~~~-~~~v~~~~~~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI---TLRRVLVGH-RAAVNVVDFDDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCC---EEEEEECCC-SSCEEEEEEETTEEEEEETTSEEEE
T ss_pred EEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCc---eeeeEecCC-CCcEEEEEeCCCEEEEEeCCCeEEE
Confidence 3444432 4689999999999999999999999986543211 111223343 47899999878889988875 5999
Q ss_pred EcCCCC---ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeee
Q psy2153 86 VDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 86 In~~Tl---ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
.|.++. +.+..|. ..|.++...+ ...++...+.+|++||..+.+.++.+
T Consensus 281 wd~~~~~~~~~~~~~~---~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHK---RGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp EETTTCCEEEEEECCS---SCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EECCcCcEEEEEcCCC---CcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 999987 4555444 6799999876 45567888999999999988776654
No 19
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.07 E-value=0.0062 Score=55.84 Aligned_cols=120 Identities=11% Similarity=0.131 Sum_probs=86.3
Q ss_pred CCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECCe-EEEEcC
Q psy2153 14 ILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNK-IHVVDP 88 (325)
Q Consensus 14 L~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gnk-I~VIn~ 88 (325)
-++.|.++.+.. +.++.|-.||+|.+|+-... +....+. + ...+|+++.... ..|..|+.+. |.+.|.
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~~~~~~~-~-h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----SNPRTLI-G-HRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CCCEEEE-C-CSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----cCceEEc-C-CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 357899999963 36888899999999985432 2223443 2 247899998874 4677777755 999999
Q ss_pred CCC---ceeEecCCCCCceeEEEE---------------------eCCe-EEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 89 KSL---KSFDAHPRRESQVRQMTW---------------------AGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 89 ~Tl---ksf~~~~~~~~~V~~Ma~---------------------~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
++. +.|..+......|..++. +.+| .-++...+..|++||..+.+.+..+.-
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 887 456665555666766665 2233 445667889999999999998887754
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.06 E-value=0.0017 Score=60.90 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=89.5
Q ss_pred ccceee-CCCceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCC-CC--------------CCC-eEEEcCCCCCcee
Q psy2153 8 PYPLNK-ILDTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQW-DL--------------SKY-HTVTLGLPHHSVR 66 (325)
Q Consensus 8 ~L~~Ik-L~dsVl~I~~~~----~~VfVgLANGtLaVF~R~~~g~W-D~--------------~~~-~~I~LG~~~~PV~ 66 (325)
.++.++ -.++|.++.+.. +.+++|-.||+|.+|+-.....- .. .++ ..-.+-....+|.
T Consensus 195 ~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 274 (464)
T 3v7d_B 195 CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR 274 (464)
T ss_dssp EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEE
T ss_pred EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEE
Confidence 344444 457899998862 56888999999999996543211 00 001 0112222247888
Q ss_pred eeeeeCCEEEEEECC-eEEEEcCCCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeee
Q psy2153 67 SLAAVYNKVWCGYKN-KIHVVDPKSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 67 cml~v~~~LW~g~gn-kI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
++..-++.+..|+.+ .|.+.|..+.+...........|++++.+.+| ..++...+.+|++||..+.+.++.+
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 988888899888875 59999999884333323334789999998654 5667888999999999998776654
No 21
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.06 E-value=0.0016 Score=60.67 Aligned_cols=129 Identities=15% Similarity=0.071 Sum_probs=91.0
Q ss_pred Cccceee-CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-Ce
Q psy2153 7 TPYPLNK-ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NK 82 (325)
Q Consensus 7 ~~L~~Ik-L~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nk 82 (325)
+.++.++ -.+.|.++.+.++.++.|-.||+|.+|+-...+ .....+.....+|+++.... ..|..|+. +.
T Consensus 167 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 167 TKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIAN------HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp CEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSS------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCc------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 4444443 346899999999999999999999999854322 12222222247899988774 46777776 56
Q ss_pred EEEEcCCCCceeEecCCCCCceeEEEEeCC--eEEEEEe--CCCeEEEEecCccceeeeeecc
Q psy2153 83 IHVVDPKSLKSFDAHPRRESQVRQMTWAGD--GVWVSIR--LDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 83 I~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~--GVWiS~~--~ss~IrL~ha~T~e~LqdIdIa 141 (325)
|.+.|.++.+...........|+++++... .+.++.. .+..|++||..+.+.++.++..
T Consensus 241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~ 303 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAG 303 (401)
T ss_dssp EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECS
T ss_pred EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCC
Confidence 999999987433222233478999999853 4666655 6999999999999988877644
No 22
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.02 E-value=0.00064 Score=61.85 Aligned_cols=120 Identities=9% Similarity=0.016 Sum_probs=82.6
Q ss_pred CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCC-CCCCCeEEEcCCCCCceeeeeeeC---------CEEEEEEC-CeE
Q psy2153 15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQW-DLSKYHTVTLGLPHHSVRSLAAVY---------NKVWCGYK-NKI 83 (325)
Q Consensus 15 ~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~W-D~~~~~~I~LG~~~~PV~cml~v~---------~~LW~g~g-nkI 83 (325)
.++|+||.+.++.+++|-.||+|.+|+-...... .......+. + ...+|+++.... ..|..++. +.|
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i 93 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-V-HKSGLHHVDVLQAIERDAFELCLVATTSFSGDL 93 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-C-CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCE
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEe-c-CCCcEEEEEEecccccCCccccEEEEEcCCCCE
Confidence 4699999999999999999999999986543211 111123333 3 347899997774 35666665 459
Q ss_pred EEEcCCCCc--------eeEecCCC--CCceeEEEEe----CCe-E-EEEEeCCCeEEEEecCc------cceee
Q psy2153 84 HVVDPKSLK--------SFDAHPRR--ESQVRQMTWA----GDG-V-WVSIRLDSTLRMYNAHT------YQHLQ 136 (325)
Q Consensus 84 ~VIn~~Tlk--------sf~~~~~~--~~~V~~Ma~~----G~G-V-WiS~~~ss~IrL~ha~T------~e~Lq 136 (325)
.+++.++.+ .+..|+.. ...|.++++. .++ . .++...+..|++||..+ .+.++
T Consensus 94 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 94 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp EEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred EEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 999877653 22333222 4889999998 444 4 67778899999999999 66665
No 23
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.02 E-value=0.0015 Score=61.74 Aligned_cols=132 Identities=10% Similarity=0.049 Sum_probs=89.4
Q ss_pred CCccceeeCCCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCC-----CCCCCeEEEcCCCCCceeeeeeeC--C-E
Q psy2153 6 PTPYPLNKILDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQW-----DLSKYHTVTLGLPHHSVRSLAAVY--N-K 74 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~~---~VfVgLANGtLaVF~R~~~g~W-----D~~~~~~I~LG~~~~PV~cml~v~--~-~ 74 (325)
.+....+.-++.|.+|.+... .++++..+|+|.||+......- .......+.-. ..+|.++.... . .
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH--QKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC--SSCCCCEEECTTSTTE
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC--CCCeEEEEeCCCCCCe
Confidence 345667778899999999864 5667778999999997542100 02222333322 36888887764 2 6
Q ss_pred EEEEEC-CeEEEEcCCCC----ce---eEecCCCCCceeEEEEe--CCeEEEEEeCCCeEEEEecCcc---ceeeeee
Q psy2153 75 VWCGYK-NKIHVVDPKSL----KS---FDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTY---QHLQDVD 139 (325)
Q Consensus 75 LW~g~g-nkI~VIn~~Tl----ks---f~~~~~~~~~V~~Ma~~--G~GVWiS~~~ss~IrL~ha~T~---e~LqdId 139 (325)
|..|+. +.|.+.+..+. +. ..........|.++++. +..+.++...+..|++||..+. +.+..+.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~ 274 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD 274 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee
Confidence 776665 55999998873 11 11112234779999997 4568889999999999999987 4555553
No 24
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.00018 Score=62.79 Aligned_cols=123 Identities=10% Similarity=0.073 Sum_probs=87.5
Q ss_pred CCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC-EEEEEECC-eEEEEcCCC
Q psy2153 14 ILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-KVWCGYKN-KIHVVDPKS 90 (325)
Q Consensus 14 L~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~-~LW~g~gn-kI~VIn~~T 90 (325)
.++.|.++.+. +++++++-.+|+|.+|+.... +....+.- ...+|+++....+ ++.+++.+ .|++.|.++
T Consensus 183 ~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~-----~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 183 HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTG-----DVLRTYEG--HESFVYCIKLLPNGDIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp CSSCEEEEEEEETTEEEEEETTSEEEEEETTTC-----CEEEEEEC--CSSCEEEEEECTTSCEEEEETTSEEEEECTTT
T ss_pred CcccEEEEEEcCCCeEEEccCCCeEEEEECCch-----hhhhhhhc--CCceEEEEEEecCCCEEEEecCCEEEEEECCC
Confidence 45788898885 668999999999999985432 11122332 3478999988754 78887774 599999988
Q ss_pred CceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 91 LKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 91 lksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
.+....-......|+.|+.+.+|-.++...+..|++||.++.+.+.+..+...
T Consensus 256 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 308 (313)
T 3odt_A 256 GSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDEIKGE 308 (313)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC-------
T ss_pred CceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhhhhhh
Confidence 84333222334689999998887788999999999999999998888776543
No 25
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.003 Score=57.15 Aligned_cols=129 Identities=14% Similarity=0.227 Sum_probs=87.7
Q ss_pred eeCCCceeeeEEeCC---eEEEEecCCcEEEEEc----CCCC-CCCCCCCeEEEcCC--------CCCceeeeeeeC--C
Q psy2153 12 NKILDTALPPVHVQG---RVVCALADGSVAIFRR----GPDG-QWDLSKYHTVTLGL--------PHHSVRSLAAVY--N 73 (325)
Q Consensus 12 IkL~dsVl~I~~~~~---~VfVgLANGtLaVF~R----~~~g-~WD~~~~~~I~LG~--------~~~PV~cml~v~--~ 73 (325)
..=.++|.|+.+..+ .+++|-.||+|.+|+. ..+. .|++.....+.--. ...+|+++.... +
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 333479999999754 7888899999999987 4322 24443333333211 235899998874 4
Q ss_pred EEEEEECC-eEEEEcCCCC--ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 74 KVWCGYKN-KIHVVDPKSL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 74 ~LW~g~gn-kI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
.|.+|+.+ .|.+.+.+.. +.+..|. ..|+++++..+| ..++...+..|++||..+.+.++.+.....
T Consensus 122 ~l~~~~~dg~i~i~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTGALLNVLNFHR---APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCC---SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred EEEEEeCCCeEEEEeCCCCeeeeccCCC---ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 67777775 4999993332 3444444 789999998555 445777899999999999999998887654
No 26
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.0067 Score=53.65 Aligned_cols=135 Identities=16% Similarity=0.137 Sum_probs=92.6
Q ss_pred CCCCccceeeCCCceeeeEEe--CCeEEEEecC-----CcEEEEEcCCCCCC------CCCCCeEEEcCCCCCceeeeee
Q psy2153 4 PHPTPYPLNKILDTALPPVHV--QGRVVCALAD-----GSVAIFRRGPDGQW------DLSKYHTVTLGLPHHSVRSLAA 70 (325)
Q Consensus 4 ~~~~~L~~IkL~dsVl~I~~~--~~~VfVgLAN-----GtLaVF~R~~~g~W------D~~~~~~I~LG~~~~PV~cml~ 70 (325)
...+.+..++.+..|.++.+. ...++++..+ |.|.+|+......- .......+.......+++++..
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 345677888888999999986 4567788888 99999996543210 0111122222221137888766
Q ss_pred eC--CEEEEEEC-CeEEEEcCCC-C---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 71 VY--NKVWCGYK-NKIHVVDPKS-L---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 71 v~--~~LW~g~g-nkI~VIn~~T-l---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
.. ..|.+|+. +.|.++|..+ . +.+..|. ..|++++.+.+| ..++...+..|++||..+.+.+..+...
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 259 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE---KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD 259 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS---SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC---CceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC
Confidence 64 46777777 5599999998 4 3444444 789999998666 3455667899999999999988887733
No 27
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.99 E-value=0.00025 Score=65.55 Aligned_cols=136 Identities=12% Similarity=0.100 Sum_probs=89.0
Q ss_pred CCCccceeeCCCce------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEc-CCCCCceee-eeeeCCEE
Q psy2153 5 HPTPYPLNKILDTA------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTL-GLPHHSVRS-LAAVYNKV 75 (325)
Q Consensus 5 ~~~~L~~IkL~dsV------l~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~L-G~~~~PV~c-ml~v~~~L 75 (325)
..+.+|+.++++.+ ...+..+++||++..+|.|..|+...+. .|..+....... .....++.+ ....+++|
T Consensus 27 ~~~~~W~~~~~~~~~~~~~~~~p~v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (376)
T 3q7m_A 27 TPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHV 106 (376)
T ss_dssp CCEEEEEECCTTTTTTSCCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEE
T ss_pred cceEEeEEecCCCccccceeeccEEECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEE
Confidence 45788999998653 3667789999999999999999975432 354222110000 000234433 45567999
Q ss_pred EEEECC-eEEEEcCCCCce-eEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 76 WCGYKN-KIHVVDPKSLKS-FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 76 W~g~gn-kI~VIn~~Tlks-f~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
|+++.+ .|+.+|++|.+. +...... ......+..+.-||+. ..+..|..||++|.+.+...+...
T Consensus 107 ~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~~~~~v~v~-~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 107 YIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVVSDGLVLIH-TSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEEETTEEEEE-CTTSEEEEEETTTCCEEEEEECCC
T ss_pred EEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEEECCEEEEE-cCCCeEEEEECCCCcEEEEEeCCC
Confidence 999974 699999999842 2222211 1222334556678865 456789999999999999887754
No 28
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.98 E-value=0.0045 Score=56.45 Aligned_cols=113 Identities=17% Similarity=0.191 Sum_probs=79.8
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC--EEEEEEC-CeEEEEcCCCC
Q psy2153 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGYK-NKIHVVDPKSL 91 (325)
Q Consensus 16 dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~--~LW~g~g-nkI~VIn~~Tl 91 (325)
+.|.|+.+. +++++.+-.||+|.+|+-.... ....+-....+|+++....+ .+..|+. +.|.+.|.++.
T Consensus 144 ~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~ 216 (340)
T 1got_B 144 GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ-------QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216 (340)
T ss_dssp SCEEEEEEEETTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred ccEEEEEECCCCcEEEEECCCcEEEEECCCCc-------EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 467777764 6788889999999998743321 12233223478999877753 4555665 45999999887
Q ss_pred ---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeee
Q psy2153 92 ---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 92 ---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
+.|..|. ..|+.++.+.+| ..++...+.+|++||..+.+.+..+
T Consensus 217 ~~~~~~~~h~---~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 217 MCRQTFTGHE---SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp SEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred eeEEEEcCCc---CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 4455554 679999998554 6677888999999999887766544
No 29
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.98 E-value=0.0017 Score=58.56 Aligned_cols=126 Identities=11% Similarity=0.142 Sum_probs=88.0
Q ss_pred CCCccceeeCCCceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC---EEE
Q psy2153 5 HPTPYPLNKILDTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN---KVW 76 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~~-----~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~---~LW 76 (325)
..+.+..++.++.+.++.+.. ..+++|..+|.|.+|+.... +....+.- ...+|+++....+ -+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-----~~~~~~~~--~~~~v~~~~~~~~~~~ll~ 203 (408)
T 4a11_B 131 TLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-----SCSHILQG--HRQEILAVSWSPRYDYILA 203 (408)
T ss_dssp TTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-----CCCEEECC--CCSCEEEEEECSSCTTEEE
T ss_pred CCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-----ceeeeecC--CCCcEEEEEECCCCCcEEE
Confidence 345667778888999988863 27999999999999985432 22233332 2478999988753 266
Q ss_pred EEECC-eEEEEcCCCCc----eeEec------------CCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeee
Q psy2153 77 CGYKN-KIHVVDPKSLK----SFDAH------------PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD 137 (325)
Q Consensus 77 ~g~gn-kI~VIn~~Tlk----sf~~~------------~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~Lqd 137 (325)
+|+.+ .|.+.|..+.+ .++.+ ......|++++.+.+| ..++...+..|++||..+.+.+..
T Consensus 204 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (408)
T 4a11_B 204 TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLV 282 (408)
T ss_dssp EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCC
T ss_pred EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcccee
Confidence 67764 59999987752 22111 2344789999998776 455677899999999999876543
No 30
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.96 E-value=0.0001 Score=65.78 Aligned_cols=122 Identities=11% Similarity=0.036 Sum_probs=77.8
Q ss_pred CccceeeCCCc-eeeeEEe-CCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCCCCCceeeeee-eCCEEEEEECCe
Q psy2153 7 TPYPLNKILDT-ALPPVHV-QGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNK 82 (325)
Q Consensus 7 ~~L~~IkL~ds-Vl~I~~~-~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~~~~PV~cml~-v~~~LW~g~gnk 82 (325)
+.+|....+.. +.++... ++++|+|..+|.|..|+.+ +. .|. ..+.. ..+.++.. -++.||+++ +.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~------~~~~~--~~~~~~~~d~~g~l~v~t-~~ 196 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWR------FKTND--AITSAASIGKDGTIYFGS-DK 196 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEE------EECSS--CCCSCCEECTTCCEEEES-SS
T ss_pred CEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEE------EecCC--CceeeeEEcCCCEEEEEe-CE
Confidence 45666666654 3455554 7889999888888888865 21 132 33333 45666665 368999999 89
Q ss_pred EEEEcCCCCceeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 83 IHVVDPKSLKSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 83 I~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
|+.+| .+.+.+-........+..++.+.+ .+|++... .-|..||. +.+.+..+...
T Consensus 197 l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~-~gl~~~~~-~g~~~~~~~~~ 253 (330)
T 3hxj_A 197 VYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLD-GHLYAINP-DGTEKWRFKTG 253 (330)
T ss_dssp EEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETT-TEEEEECT-TSCEEEEEECS
T ss_pred EEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCC-CeEEEECC-CCCEeEEeeCC
Confidence 99999 454322222223356788888866 69988764 45666675 55556666554
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.93 E-value=0.0032 Score=57.14 Aligned_cols=125 Identities=10% Similarity=0.180 Sum_probs=84.2
Q ss_pred CceeeeEEe------CCe-EEEEecCCcEEEEEcCC------CCCCCCCCCeEEEc-----CCCCCceeeeeeeCC-EEE
Q psy2153 16 DTALPPVHV------QGR-VVCALADGSVAIFRRGP------DGQWDLSKYHTVTL-----GLPHHSVRSLAAVYN-KVW 76 (325)
Q Consensus 16 dsVl~I~~~------~~~-VfVgLANGtLaVF~R~~------~g~WD~~~~~~I~L-----G~~~~PV~cml~v~~-~LW 76 (325)
+.|.++.+. .+. +++|-.||.|.+|+... ...-.+.+...+.- .....+|+++....+ .+.
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~ 201 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIA 201 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEE
Confidence 899999998 456 88888999999998654 22211122113332 222478999888754 555
Q ss_pred EEEC-CeEEEEcCCCC---ceeEe---cCCCCCceeEEEEeCCeEE-EEEeCC---CeEEEEecCccceeeeeec
Q psy2153 77 CGYK-NKIHVVDPKSL---KSFDA---HPRRESQVRQMTWAGDGVW-VSIRLD---STLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 77 ~g~g-nkI~VIn~~Tl---ksf~~---~~~~~~~V~~Ma~~G~GVW-iS~~~s---s~IrL~ha~T~e~LqdIdI 140 (325)
+++. +.|.++|.++. +.|.. |......|++++.+.+|-+ ++...+ ..|++||..+.+.+..+..
T Consensus 202 ~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 202 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred EEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 5555 55999999887 45565 5333688999999755533 344455 7999999999988877654
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.92 E-value=0.00035 Score=64.39 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=91.2
Q ss_pred eCCCceeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeee-eCCEEEEEE--CCeEEEEcC
Q psy2153 13 KILDTALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGY--KNKIHVVDP 88 (325)
Q Consensus 13 kL~dsVl~I~~~~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~-v~~~LW~g~--gnkI~VIn~ 88 (325)
.|.+.+..|...++++|++.. +|+|.|++..... ..+.++.+. ..+.+.. -+++||++. .++|++||+
T Consensus 41 ~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~-----~~~~i~~~~---~p~~i~~~~~g~lyv~~~~~~~v~~iD~ 112 (328)
T 3dsm_A 41 KLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFK-----EVGRITGFT---SPRYIHFLSDEKAYVTQIWDYRIFIINP 112 (328)
T ss_dssp CCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCC-----EEEEEECCS---SEEEEEEEETTEEEEEEBSCSEEEEEET
T ss_pred ccCccceEEEEECCEEEEEEcCCCEEEEEECcccE-----EEEEcCCCC---CCcEEEEeCCCeEEEEECCCCeEEEEEC
Confidence 355778889889999999987 4789999865432 223454443 3456666 578999998 688999999
Q ss_pred CCCc---eeEecCC--CCCceeEEEEeCCeEEEEEe-CCCeEEEEecCccceeeeeecchh
Q psy2153 89 KSLK---SFDAHPR--RESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 89 ~Tlk---sf~~~~~--~~~~V~~Ma~~G~GVWiS~~-~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
+|.+ .+++... .......|+..+..+|++-. .+..|.+||.+|.+.++.|.+...
T Consensus 113 ~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~ 173 (328)
T 3dsm_A 113 KTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ 173 (328)
T ss_dssp TTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC
T ss_pred CCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC
Confidence 9983 4554331 11256677778889999987 488999999999999999987543
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.91 E-value=0.00055 Score=63.19 Aligned_cols=124 Identities=13% Similarity=0.151 Sum_probs=86.1
Q ss_pred CCccceeeCCCc------------eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCCCCCceeeeeeeC
Q psy2153 6 PTPYPLNKILDT------------ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVY 72 (325)
Q Consensus 6 ~~~L~~IkL~ds------------Vl~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~~~~PV~cml~v~ 72 (325)
-+.+|+.+++.+ .......++.||++..+|.|..|+...+. .|.. .++. ...+...+
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~------~~~~----~~~~~~~~ 277 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKR------ELGS----VNDFIVDG 277 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEE------CCCC----EEEEEEET
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeec------cCCC----CCCceEEC
Confidence 356677666532 23445578999999999999999965432 3542 2232 44566779
Q ss_pred CEEEEEECC-eEEEEcCCCCce-eEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 73 NKVWCGYKN-KIHVVDPKSLKS-FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 73 ~~LW~g~gn-kI~VIn~~Tlks-f~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
++||++..+ .|+.+|++|.+. +.........+...+..+..||+. ..+..|++||.+|.+.+...++
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~-~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVG-DSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEE-CTTSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEE-eCCCeEEEEECCCCcEEEEEec
Confidence 999999875 799999999843 333322334455566678888866 4567899999999999887765
No 34
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.90 E-value=0.0043 Score=58.47 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=82.8
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
+++|+|+.+.. +.++.|-.||+|.||+-.... ..+.+. | ...+|+++.... +.|-.|+.+ .|.+.|..
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~-----~~~~l~-~-h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD-----FERTLK-G-HTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC-----CCEEEC-C-CSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----EEEEEe-c-cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 36899999874 467888899999999854321 223333 2 237899988764 456666665 49999988
Q ss_pred CCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 90 SLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 90 Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+.+....-......|++++...+| .-++...+.+|++||..+.+.++.+.
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~ 231 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 874332222233779999987554 56688899999999999887766543
No 35
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.00036 Score=64.41 Aligned_cols=131 Identities=10% Similarity=0.128 Sum_probs=101.8
Q ss_pred CCCCccceeeCCCce--eeeEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC
Q psy2153 4 PHPTPYPLNKILDTA--LPPVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK 80 (325)
Q Consensus 4 ~~~~~L~~IkL~dsV--l~I~~~~~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g 80 (325)
..-|.+++++|++.. .-|...++++|+.. .++++.||+... ++.-..++.+. .+. .|..-+++||++.|
T Consensus 51 ~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t-----l~~~~ti~~~~--~Gw-glt~dg~~L~vSdg 122 (243)
T 3mbr_X 51 ETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT-----LTPRARFRYPG--EGW-ALTSDDSHLYMSDG 122 (243)
T ss_dssp TTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT-----TEEEEEEECSS--CCC-EEEECSSCEEEECS
T ss_pred CCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCc-----CcEEEEEeCCC--Cce-EEeeCCCEEEEECC
Confidence 345788899999876 34567789999974 377899999644 23445677764 554 44555789999988
Q ss_pred -CeEEEEcCCCC---ceeEecCC--CCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 81 -NKIHVVDPKSL---KSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 81 -nkI~VIn~~Tl---ksf~~~~~--~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
++|+++|++|+ ++.++..+ +-..++.|.+.+.-+|...-.+..|...|++|.+.+..||++.
T Consensus 123 s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 123 TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence 56999999999 56666443 3357788899888899999899999999999999999999886
No 36
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.00028 Score=72.58 Aligned_cols=110 Identities=16% Similarity=0.273 Sum_probs=76.2
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEc-CCCCCceeeeeee-CCEEEEEECCeEEEEcCCCC-
Q psy2153 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSL- 91 (325)
Q Consensus 16 dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~L-G~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~Tl- 91 (325)
+.|.+|... ++++|+|..+|-|..|+... +.+. .+.. +.+...|+++..- +++||+|..+-++.+++++.
T Consensus 407 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~~~~-----~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTYLGNISYYNTRL-KKFQ-----IIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKK 480 (781)
T ss_dssp SBEEEEEECTTSCEEEEETTEEEEEECSSS-CEEE-----ECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSS
T ss_pred cceEEEEECCCCCEEEEeccCCEEEEcCCC-CcEE-----EeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCe
Confidence 578888875 78999999888899997543 2221 1111 2233678888766 57999999989999999876
Q ss_pred -ceeEecC---CCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcc
Q psy2153 92 -KSFDAHP---RRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 92 -ksf~~~~---~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~ 132 (325)
+.+.... .....|..|+.+..| +|++..... |..||..+.
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred EEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence 3343221 124678898887554 999987555 666887664
No 37
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.86 E-value=0.0071 Score=53.63 Aligned_cols=118 Identities=18% Similarity=0.152 Sum_probs=82.2
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
...|.++.+. .+.++.|-.||+|.+|+-.... ....+.- ...+|.++.... +.|..|+.+ .|.+.|.+
T Consensus 65 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 65 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK-----CLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-----EEEEEEC--CSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc-----EEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 3578898886 3467788899999999854321 1122332 237898887764 466666664 59999998
Q ss_pred CCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 90 SLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 90 Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+.+....-......|+.++...+| ..++...+..|++||..+.+.+..+.
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 188 (312)
T 4ery_A 138 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 188 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEe
Confidence 874332222234679999988655 56677889999999999998877663
No 38
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.86 E-value=0.00044 Score=61.49 Aligned_cols=119 Identities=12% Similarity=0.205 Sum_probs=86.8
Q ss_pred CCceeeeEEe------CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC------EEEEEECC-
Q psy2153 15 LDTALPPVHV------QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN------KVWCGYKN- 81 (325)
Q Consensus 15 ~dsVl~I~~~------~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~------~LW~g~gn- 81 (325)
.++|.+|.+. +..++++..+|+|.+|+...++.. ...+...-.....+|+++....+ .|..|+.+
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI--RLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE--EeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 5699999998 456999999999999996543221 11111111112367999887754 57777775
Q ss_pred eEEEEcCCCCc---eeEecCCCCCceeEEEEeC--CeEEEEEeCCCeEEEEecCccceeeee
Q psy2153 82 KIHVVDPKSLK---SFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 82 kI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G--~GVWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
.|.++|.++.+ .+..| ...|++++... ....++...+..|++||..+.+.+..+
T Consensus 96 ~i~v~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGH---GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEECTTTCCEEEEEESC---CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEchhceEeeeecCC---CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 59999998874 44444 47899999974 347778888999999999999988887
No 39
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.86 E-value=0.0062 Score=55.51 Aligned_cols=114 Identities=20% Similarity=0.194 Sum_probs=81.3
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~ 89 (325)
.++|.++.+.. ..++.|-.||+|.+|+-... +....+.... .+|.++.... +.|-+|+. +.|.+.+..
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-----~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-----NKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-----CEEEEEECSS--SCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-----CcceEeecCC--ccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 36899999864 36888889999999984332 2224445443 7888877664 45655655 458999987
Q ss_pred CC-------ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeee
Q psy2153 90 SL-------KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 90 Tl-------ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
+. +.+..|. ..|+++.....+..++...+.+|++||.++.+.+..+
T Consensus 128 ~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~ 180 (340)
T 1got_B 128 TREGNVRVSRELAGHT---GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF 180 (340)
T ss_dssp TCSBSCEEEEEEECCS---SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cCCCcceeEEEecCCC---ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE
Confidence 64 2334444 6788888887788889999999999999988766543
No 40
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.86 E-value=0.00034 Score=65.63 Aligned_cols=132 Identities=11% Similarity=0.096 Sum_probs=101.5
Q ss_pred CCCCCccceeeCCCceee--eEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEE
Q psy2153 3 YPHPTPYPLNKILDTALP--PVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (325)
Q Consensus 3 ~~~~~~L~~IkL~dsVl~--I~~~~~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~ 79 (325)
...-|.++++ |++.... |...+++||++. .++.+.||+... ++.-..++.+. .+. .+..-+++||.+.
T Consensus 82 ~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T-----l~~~~ti~~~~--eGw-GLt~Dg~~L~vSd 152 (268)
T 3nok_A 82 LESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMP-----PQRERTTRYSG--EGW-GLCYWNGKLVRSD 152 (268)
T ss_dssp SSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTT-----TEEEEEEECSS--CCC-CEEEETTEEEEEC
T ss_pred CCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCc-----CcEEEEEeCCC--cee-EEecCCCEEEEEC
Confidence 3455788888 9887654 788899999985 267899999644 23345566653 443 4455678999998
Q ss_pred C-CeEEEEcCCCC---ceeEecCC--CCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 80 K-NKIHVVDPKSL---KSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 80 g-nkI~VIn~~Tl---ksf~~~~~--~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
| ++|++||++|+ ++.++..+ .-..++.|.+.+.-+|++.-.+..|...|++|.+.+..||++.-
T Consensus 153 Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L 222 (268)
T 3nok_A 153 GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASAL 222 (268)
T ss_dssp SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHH
T ss_pred CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCC
Confidence 6 77999999999 45666443 33567888888778999999999999999999999999999853
No 41
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.84 E-value=0.0097 Score=54.52 Aligned_cols=106 Identities=12% Similarity=0.208 Sum_probs=78.7
Q ss_pred CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEc-CCCCCceeeeeeeC--CEEEEEECC-eEEEEcCCCC---ceeEec
Q psy2153 25 QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL-GLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSL---KSFDAH 97 (325)
Q Consensus 25 ~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~L-G~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~Tl---ksf~~~ 97 (325)
.+++++|-.||+|.+|+-. ..+.+.. .....+|+++.... +.|..|+.+ .|.+.|.++. +.+..|
T Consensus 109 ~~~l~~~~~dg~i~iwd~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSN--------FNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp SCEEEEEETTSCEEEECTT--------SCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred CCEEEEEECCCCEEEEeCC--------CcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 4578888889999988632 2233333 22348999998874 467777775 5999999887 455555
Q ss_pred CCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 98 PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 98 ~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
. ..|++++++.+| .-++...+.+|++||..+.+.++.+...
T Consensus 181 ~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 222 (420)
T 3vl1_A 181 R---ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRK 222 (420)
T ss_dssp S---SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBT
T ss_pred C---CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecC
Confidence 5 789999998555 5557788999999999999999988753
No 42
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.81 E-value=0.0046 Score=58.25 Aligned_cols=121 Identities=18% Similarity=0.185 Sum_probs=86.6
Q ss_pred ccceeeC-CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE-EcCCCCCceeeeeeeC--CEEEEEECC
Q psy2153 8 PYPLNKI-LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY--NKVWCGYKN 81 (325)
Q Consensus 8 ~L~~IkL-~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I-~LG~~~~PV~cml~v~--~~LW~g~gn 81 (325)
.++.++- .++|.++.+. .+.++.|-.||+|.+|+-. ..+.+ .+.....+|+++.... +.|..|+.+
T Consensus 142 ~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~--------~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 142 FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ--------GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT--------SSCEEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC--------CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 3444443 3689999986 3467888899999888742 22222 2322347899988764 567777775
Q ss_pred e-EEEEcCCCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 82 K-IHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 82 k-I~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+ |.+.|.++. +.|..|. ..|+.+....+| ..++...+.+|++||..+.+..+++.
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~---~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~ 273 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHR---EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CeEEEEECCCCcEEEEEeCCC---ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec
Confidence 5 999999887 4566555 678888887665 56678889999999999998887764
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.0045 Score=55.19 Aligned_cols=113 Identities=15% Similarity=0.187 Sum_probs=79.3
Q ss_pred CCceeeeEEe----CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC----CEEEEEECC-eEEE
Q psy2153 15 LDTALPPVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYKN-KIHV 85 (325)
Q Consensus 15 ~dsVl~I~~~----~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~----~~LW~g~gn-kI~V 85 (325)
.++|.++.+. .+.++.|-.||+|.+|+-... .|. ....+.....+|+++.... +.+.+++.+ .|.+
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-RWS----QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-EEE----EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-cee----EeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 4689999986 578889999999999985432 111 2233332347899988774 467777775 5999
Q ss_pred EcCCCC---ceeEecCCCCCceeEEEEeC--------------CeEEEEEeCCCeEEEEecCccc
Q psy2153 86 VDPKSL---KSFDAHPRRESQVRQMTWAG--------------DGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 86 In~~Tl---ksf~~~~~~~~~V~~Ma~~G--------------~GVWiS~~~ss~IrL~ha~T~e 133 (325)
.|..+. ..+.. ......|+++++.. ....++...+..|++||..+.+
T Consensus 130 ~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 130 VEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp EECCTTSCCCEEEE-ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred EecCCCCceeeEEe-cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence 998876 22211 12347799999886 4566777889999999987654
No 44
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.80 E-value=0.0016 Score=59.98 Aligned_cols=125 Identities=10% Similarity=0.026 Sum_probs=93.5
Q ss_pred CCccceeeCCC--ceeeeEEeCCeEEEEecC---CcEEEEEcCCCCCCCCCCCeEEEcCCCCCce-eeeeeeCCEEEEEE
Q psy2153 6 PTPYPLNKILD--TALPPVHVQGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCGY 79 (325)
Q Consensus 6 ~~~L~~IkL~d--sVl~I~~~~~~VfVgLAN---GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV-~cml~v~~~LW~g~ 79 (325)
++.+++...+. =.+-|.|.++++|++... .+|.+|+-..+ +....+.++. .+. -.+...+++||...
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tg-----kv~~~~~l~~--~~fgeGi~~~~~~ly~lt 81 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETG-----RILQRAEVPP--PYFGAGIVAWRDRLIQLT 81 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTC-----CEEEEEECCT--TCCEEEEEEETTEEEEEE
T ss_pred eEEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCC-----CEEEEEeCCC--CcceeEEEEeCCEEEEEE
Confidence 45666665553 366899999999999887 48999985443 2224566654 343 34677899999998
Q ss_pred --CCeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 80 --KNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 80 --gnkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
.++++|+|++|+ ++|..... - -.++..+.-+|+|= .+..|..+|++|++.+..|.+..
T Consensus 82 w~~~~v~v~D~~tl~~~~ti~~~~~---G-wglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~ 144 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTPRARFRYPGE---G-WALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTA 144 (243)
T ss_dssp SSSSEEEEEETTTTEEEEEEECSSC---C-CEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred eeCCEEEEEECCcCcEEEEEeCCCC---c-eEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEcc
Confidence 688999999999 46665431 1 35667888899995 69999999999999999998864
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.80 E-value=0.011 Score=53.80 Aligned_cols=115 Identities=7% Similarity=-0.008 Sum_probs=82.0
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC---CEEEEEEC-CeEEEEc
Q psy2153 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYK-NKIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~---~~LW~g~g-nkI~VIn 87 (325)
.+.|.|+.+.. +.++.|-.||+|.+|+-... +....+.+-....+|+++.... +.|..++. +.|.+.|
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-----NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST-----TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-----ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 47899999975 46888999999999985432 2223444322347999998876 35666666 4599999
Q ss_pred CCCC--ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcccee
Q psy2153 88 PKSL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 88 ~~Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~L 135 (325)
.++. +.+..+......|++++.+.++ ..++...+..|++||. +.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 148 FSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEI 197 (383)
T ss_dssp TTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEE
T ss_pred CCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEE
Confidence 8875 5566666556889999998554 5556778899999998 34433
No 46
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.79 E-value=0.0069 Score=53.63 Aligned_cols=120 Identities=8% Similarity=0.075 Sum_probs=78.6
Q ss_pred CCCceeeeEEeC-CeEEEEec-----CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC-----CEEEEEECC-
Q psy2153 14 ILDTALPPVHVQ-GRVVCALA-----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-----NKVWCGYKN- 81 (325)
Q Consensus 14 L~dsVl~I~~~~-~~VfVgLA-----NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~-----~~LW~g~gn- 81 (325)
-.++|.++.+.. +.-+++.+ ||+|.+|+-.... .......+. ..+|+++.... +.|..|+.+
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~-----~~~~~~~~~-~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD-----LKLLREIEK-AKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS-----EEEEEEEEE-SSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc-----ccceeeecc-cCcEEEEEEcCCCCCCceEEEecCCC
Confidence 567999999986 43344333 8999999854321 112233343 47899998875 457777765
Q ss_pred eEEEEcCCCCc-eeEecCCCCCceeEEEEe-------CCeEEEEEeCCCeEEEEecCccc-eeeeee
Q psy2153 82 KIHVVDPKSLK-SFDAHPRRESQVRQMTWA-------GDGVWVSIRLDSTLRMYNAHTYQ-HLQDVD 139 (325)
Q Consensus 82 kI~VIn~~Tlk-sf~~~~~~~~~V~~Ma~~-------G~GVWiS~~~ss~IrL~ha~T~e-~LqdId 139 (325)
.|.+.+.++.+ ....-......|+++.+. .....++...+..|++||..+.+ .++.+.
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME 157 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc
Confidence 59999988763 222222233778888653 22356678889999999999876 444443
No 47
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.78 E-value=0.0011 Score=58.88 Aligned_cols=130 Identities=14% Similarity=0.160 Sum_probs=92.8
Q ss_pred CCccceeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC---CEEEEEECC-
Q psy2153 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYKN- 81 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~---~~LW~g~gn- 81 (325)
.++++.++.++.|.++.+..+.++++..+|+|.+|+....+. ........+. ..+|+++.... +.+.+|+.+
T Consensus 141 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 141 NLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED---DNGTIEESGL-KYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp ESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTT---CCCEEEECSC-SSCEEEEEECSGGGCEEEEEETTS
T ss_pred CCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCcccc---ccceeeecCC-CCceeEEEECCCCCCEEEEEecCC
Confidence 456777888999999999999999999999999999644121 1223333332 46899988764 567777775
Q ss_pred eEEEEc--CC------CC-ceeEecCC------CCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 82 KIHVVD--PK------SL-KSFDAHPR------RESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 82 kI~VIn--~~------Tl-ksf~~~~~------~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.|.+.+ .. .. ..|..|.. ....|++++.+.+| ..++...+..|++||..+.+.+..+.
T Consensus 217 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 577744 43 22 46666653 13489999998655 34466678999999999998877654
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.78 E-value=0.0058 Score=54.08 Aligned_cols=118 Identities=9% Similarity=0.058 Sum_probs=81.3
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~ 89 (325)
+++|+|+.+.. +.+++|-.||+|.||+-... + ..-.+.....+|+++.... +.|..++. +.|.+.|.+
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-----~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-----E--RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTC-----C--EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-----h--hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 46899999963 46888889999999984332 1 2223333347899998874 46766666 469999998
Q ss_pred CCceeEecCCCCCceeEEEEeCCeEEEEE-eCC-----CeEEEEecCccceeeeeec
Q psy2153 90 SLKSFDAHPRRESQVRQMTWAGDGVWVSI-RLD-----STLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 90 Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~-~~s-----s~IrL~ha~T~e~LqdIdI 140 (325)
+.+...... ....|++++.+.+|-++.. ..+ ..|++||..+.+....+..
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 884332222 3478999999876644444 334 7999999998877665554
No 49
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.78 E-value=0.00071 Score=69.34 Aligned_cols=107 Identities=14% Similarity=0.189 Sum_probs=72.4
Q ss_pred CceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCC-CCCCeEEEcCCCCCceeeeeee-CCEEEEEECCeEEEEcCCCCc
Q psy2153 16 DTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWD-LSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLK 92 (325)
Q Consensus 16 dsVl~I~~-~~~~VfVgLANGtLaVF~R~~~g~WD-~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~Tlk 92 (325)
..|.||.- .++++|+|..+| |.-|+-. .+. ...+. .+ +...|+++..- ++.||+|+.+-++.+|+.+.
T Consensus 22 n~V~~I~qD~~G~lWigT~~G-L~ryDG~---~~~~~~~~~--~~--~~~~i~~i~~d~~g~lWigT~~Gl~~yd~~~~- 92 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKG-LFSYDGY---STQQHFTYG--EN--NNTRIYCGVIIDNTYLYMGTDNGILVYNYRAD- 92 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSC-EEEECSS---CEEECSCTT--ST--TSSCEEEEEEETTTEEEEEETTEEEEEETTTT-
T ss_pred ceEEEEEECCCCCEEEEECCC-ccccCCC---ceEEEEccC--CC--CCceEEEEEEcCCCcEEEEeCCCeEEEeCCCC-
Confidence 48999986 477999999988 7778621 111 11110 12 23679997765 47999999999999999875
Q ss_pred eeEec-CCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccc
Q psy2153 93 SFDAH-PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 93 sf~~~-~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e 133 (325)
.|... ......|+.++.....+|++... -|..||..+.+
T Consensus 93 ~f~~~~~~~~~~i~~i~~~~g~lWigt~~--Gl~~~~~~~~~ 132 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMALQGDTLWLGALN--GLYTYQLQSRK 132 (758)
T ss_dssp EECCCSCCCCSCEEEEEEETTEEEEEETT--EEEEEETTTCC
T ss_pred EEECcccCCCceEEEEEecCCcEEEEcCC--cceeEeCCCCe
Confidence 33221 11234688887777789998765 68889987643
No 50
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.78 E-value=0.013 Score=54.03 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=77.5
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC----CEEEEEECC-eEEEEcC
Q psy2153 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYKN-KIHVVDP 88 (325)
Q Consensus 16 dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~----~~LW~g~gn-kI~VIn~ 88 (325)
+.|.++.+. +++++.|-.||+|.+|+-.... ..+.+. |. ..+|.++.... +.+..|+.+ .|.+.|.
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-----~~~~~~-~h-~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~ 227 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQ-----LLQSFH-GH-GADVLCLDLAPSETGNTFVSGGCDKKAMVWDM 227 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-----EEEEEE-CC-SSCEEEEEECCCSSCCEEEEEETTSCEEEEET
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-----EEEEEc-CC-CCCeEEEEEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 467777775 3478889999999998743321 112222 32 36888876542 478887775 5999999
Q ss_pred CCCc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceee
Q psy2153 89 KSLK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 89 ~Tlk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
++.+ .|+.|. ..|++++...+| ..++...+.+||+||..+.+.+.
T Consensus 228 ~~~~~~~~~~~h~---~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 228 RSGQCVQAFETHE---SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp TTCCEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCcEEEEecCCC---CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 8874 444444 789999987544 66788899999999998766543
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.77 E-value=0.0074 Score=57.88 Aligned_cols=119 Identities=18% Similarity=0.203 Sum_probs=85.5
Q ss_pred CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCC---ceeeeeeeCC---EEEEEEC-CeEEE
Q psy2153 16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH---SVRSLAAVYN---KVWCGYK-NKIHV 85 (325)
Q Consensus 16 dsVl~I~~~~~---~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~---PV~cml~v~~---~LW~g~g-nkI~V 85 (325)
+.|.++.+..+ .++.+-.||+|.+|+.... + ..-.+..... +|+++....+ .|..++. +.|.+
T Consensus 161 ~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-----~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 161 QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-----K--FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp SCEEEEEECSSSSCEEEEEETTTEEEEEETTTB-----E--EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-----c--eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 57888888755 6888999999999973221 1 1222322235 8999988744 6777776 45999
Q ss_pred EcCCCCceeEec-C---CCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 86 VDPKSLKSFDAH-P---RRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 86 In~~Tlksf~~~-~---~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
.|.++.+....- . .....|+.++.......++...+..|++||..+.+.++.+...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 234 FDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp EETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 999887433222 2 3457899999973336667788999999999999999998876
No 52
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.76 E-value=0.00079 Score=62.85 Aligned_cols=132 Identities=8% Similarity=0.117 Sum_probs=101.6
Q ss_pred CCCCCccceeeCCCceee--eEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEE
Q psy2153 3 YPHPTPYPLNKILDTALP--PVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (325)
Q Consensus 3 ~~~~~~L~~IkL~dsVl~--I~~~~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~ 79 (325)
...-|.++++.|++...- |...+++||++.- ++++.||+... ++.-..++.+. .+. .+..-+++||.+.
T Consensus 72 ~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t-----~~~~~ti~~~~--eG~-glt~dg~~L~~Sd 143 (262)
T 3nol_A 72 IESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN-----LRQVRSFNYDG--EGW-GLTHNDQYLIMSD 143 (262)
T ss_dssp TTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT-----CCEEEEEECSS--CCC-CEEECSSCEEECC
T ss_pred CCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECcc-----CcEEEEEECCC--Cce-EEecCCCEEEEEC
Confidence 345578899999987744 7788999999964 77899999644 24445677754 443 3344568999998
Q ss_pred C-CeEEEEcCCCC---ceeEecC--CCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 80 K-NKIHVVDPKSL---KSFDAHP--RRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 80 g-nkI~VIn~~Tl---ksf~~~~--~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
| ++|++||++|+ +..++.. ++-..++.|.+.+.-+|+..-.+..|...|++|.+.+..||++.
T Consensus 144 Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 144 GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 6 66999999999 4566643 23355667888877899999999999999999999999999985
No 53
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.74 E-value=0.00042 Score=71.41 Aligned_cols=112 Identities=12% Similarity=0.238 Sum_probs=77.0
Q ss_pred CceeeeEEe-CCe-EEEEecCCcEEEEEcCCCCCCCCC--CCeEEEcCCCCCceeeeeee-CCEEEEEECCeEEEEcCCC
Q psy2153 16 DTALPPVHV-QGR-VVCALADGSVAIFRRGPDGQWDLS--KYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKS 90 (325)
Q Consensus 16 dsVl~I~~~-~~~-VfVgLANGtLaVF~R~~~g~WD~~--~~~~I~LG~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~T 90 (325)
+.|.+|... +++ +|+|..+|-|..|++..+..+... .+. + +...|+++..- +++||+|..+-++++++++
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~---l--~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~ 480 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQ---L--VNENVYAILPDGEGNLWLGTLSALVRFNPEQ 480 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSC---C--SCSCEEEEEECSSSCEEEEESSCEEEEETTT
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCC---c--CCCeeEEEEECCCCCEEEEecCceeEEeCCC
Confidence 578898874 677 999999888999986543221111 111 2 23568888765 4799999998899999988
Q ss_pred C--ceeEec----CCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccce
Q psy2153 91 L--KSFDAH----PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 91 l--ksf~~~----~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~ 134 (325)
. +.+... .-....|.++..+..| +|++.. .-|..||..+.+.
T Consensus 481 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 481 RSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp TEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred CeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 6 233221 1123678888887555 999987 3588888877543
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.73 E-value=0.0074 Score=60.61 Aligned_cols=115 Identities=19% Similarity=0.217 Sum_probs=82.6
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCC
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~ 89 (325)
++.|.|+.+. ...+.+|..||+|.||+-... ...+.+.. ...||+++.... +.|-+|+. +.|.|.|.+
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-----~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-----VEVRSIQV--TETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-----EEEEEEEC--CSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-----ceEEEEec--CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 4689999987 446888889999999984331 11133332 347999998875 46777776 569999998
Q ss_pred CCc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcc-ceeeeee
Q psy2153 90 SLK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY-QHLQDVD 139 (325)
Q Consensus 90 Tlk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~-e~LqdId 139 (325)
+.+ .+..|. ..|++++++.+| ..++...+.+|++||..+. +..+.+.
T Consensus 86 ~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 137 (814)
T 3mkq_A 86 TGEKVVDFEAHP---DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE 137 (814)
T ss_dssp TCCEEEEEECCS---SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE
T ss_pred CCcEEEEEecCC---CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc
Confidence 883 444444 779999998777 4456777899999999887 4444443
No 55
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.73 E-value=0.00024 Score=63.32 Aligned_cols=123 Identities=8% Similarity=0.068 Sum_probs=78.1
Q ss_pred CCCccceeeCCCce-eeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEE-CC
Q psy2153 5 HPTPYPLNKILDTA-LPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY-KN 81 (325)
Q Consensus 5 ~~~~L~~IkL~dsV-l~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~-gn 81 (325)
.-+.+|..++++.+ .++... ++++|++..+ |..|+++..-.|....... ........++.||+++ .+
T Consensus 48 ~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~--------~~~~~~~~~~~l~v~t~~~ 117 (330)
T 3hxj_A 48 DGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKA--------IVSDFTIFEDILYVTSMDG 117 (330)
T ss_dssp TSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-------------CCEEEETTEEEEECTTS
T ss_pred CCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCC--------cccCceEECCEEEEEecCC
Confidence 44567777777654 666664 7889998777 8889874334576543221 1112223399999988 69
Q ss_pred eEEEEcCCCC-ceeEecCCCCCceeEEEEe-CCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 82 KIHVVDPKSL-KSFDAHPRRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 82 kI~VIn~~Tl-ksf~~~~~~~~~V~~Ma~~-G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
.|+.+|++ . ..+.... ....+..++.. +..+|++. .+..|..||.+ .+.+..++..
T Consensus 118 ~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~l~vgt-~~~~l~~~d~~-g~~~~~~~~~ 175 (330)
T 3hxj_A 118 HLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGTIYVGS-NDNYLYAINPD-GTEKWRFKTN 175 (330)
T ss_dssp EEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSCEEEEC-TTSEEEEECTT-SCEEEEEECS
T ss_pred EEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCEEEEEc-CCCEEEEECCC-CCEeEEEecC
Confidence 99999988 4 2222222 23456656666 55588765 56788889988 7777777754
No 56
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.71 E-value=0.00088 Score=61.65 Aligned_cols=127 Identities=9% Similarity=0.021 Sum_probs=91.1
Q ss_pred CCccceeeCCCceeeeEE-eCCeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCC---CceeeeeeeCCEEEEEE-
Q psy2153 6 PTPYPLNKILDTALPPVH-VQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSVRSLAAVYNKVWCGY- 79 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~-~~~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~---~PV~cml~v~~~LW~g~- 79 (325)
.+.+++|.....+..|.. .++++||+- .+|+|.+|+.... +-...+.+|... .-...|..-+++||++.
T Consensus 74 ~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~-----~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~ 148 (328)
T 3dsm_A 74 FKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY-----EITGYIECPDMDMESGSTEQMVQYGKYVYVNCW 148 (328)
T ss_dssp CCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT-----EEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC
T ss_pred cEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC-----eEEEEEEcCCccccCCCcceEEEECCEEEEEcC
Confidence 466677766677888888 788999998 7889999985432 112356776511 02345666789999996
Q ss_pred --CCeEEEEcCCCC---ceeEecCCCCCceeEEEEeC-CeEEEEEeCC----------CeEEEEecCccceeeeeecc
Q psy2153 80 --KNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAG-DGVWVSIRLD----------STLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 80 --gnkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G-~GVWiS~~~s----------s~IrL~ha~T~e~LqdIdIa 141 (325)
.+.|.+||+++. +.+.+. .....|+.+. ..+|++...+ ..|.+||+.|.+..+.+++.
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g----~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~ 222 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIG----IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK 222 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECS----SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC
T ss_pred CCCCEEEEEECCCCeEEEEEEcC----CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC
Confidence 567999999998 344432 2345566664 3489888765 78999999999999888874
No 57
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.0015 Score=61.88 Aligned_cols=140 Identities=11% Similarity=0.036 Sum_probs=95.6
Q ss_pred CCcccee---eCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC-----EE
Q psy2153 6 PTPYPLN---KILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-----KV 75 (325)
Q Consensus 6 ~~~L~~I---kL~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~-----~L 75 (325)
.+.+..+ ..+..|.++.+.. ..+++|-.+|++.+|+-.....-. .....+. |. ..+|+++....+ .|
T Consensus 137 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-~~~~~~~-~h-~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 137 KNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK-FTQEPIL-GH-VSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp SSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS-CCCCCSE-EC-SSCEEEEEEEECTTSCEEE
T ss_pred CceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc-ccceeee-cc-cCceEEEEEcCCCCCCcEE
Confidence 4455555 5678999999964 478889899999999843322110 0111222 22 368999987765 56
Q ss_pred EEEECC-eEEEEcCCCCceeEe-cCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecchhhhhhc
Q psy2153 76 WCGYKN-KIHVVDPKSLKSFDA-HPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 148 (325)
Q Consensus 76 W~g~gn-kI~VIn~~Tlksf~~-~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v~~~l 148 (325)
..|+.+ .|++.|..+.+.... .......|++++.+.....++...+.+|++||..+.+.++.++....+..++
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~ 288 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYL 288 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGC
T ss_pred EEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhh
Confidence 666665 599999887743322 2223478999999833356678899999999999999999999876655444
No 58
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.68 E-value=0.017 Score=53.76 Aligned_cols=131 Identities=17% Similarity=0.152 Sum_probs=85.2
Q ss_pred eeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCC-CCCC-------CCeEEEcC---CCCCceeeeeeeC--CEEEE
Q psy2153 12 NKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQ-WDLS-------KYHTVTLG---LPHHSVRSLAAVY--NKVWC 77 (325)
Q Consensus 12 IkL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~-WD~~-------~~~~I~LG---~~~~PV~cml~v~--~~LW~ 77 (325)
+.-++.|.|+.+. +++.+|+-.++++.+|+-..+.. ..+. .+..+... .....|+++.... ..|-.
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 3456789999986 56677777788999997533210 0000 00000000 1113488887764 45666
Q ss_pred EECC-eEEEEcCCCCc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecchhhh
Q psy2153 78 GYKN-KIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 145 (325)
Q Consensus 78 g~gn-kI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v~ 145 (325)
|+.+ .|.+.|.++.+ .+..|. ..|++++...+| .-++...+.+|++||..+.+....+.....+.
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~ 210 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHE---QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVT 210 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS---SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred EcCCCeEEEEECCCCcEEEEEccCC---CCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcE
Confidence 6665 49999999884 344444 679999997555 55688889999999999999888877655443
No 59
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.0028 Score=65.14 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=81.8
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee----CCEEEEEECC-eEEEEc
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYKN-KIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v----~~~LW~g~gn-kI~VIn 87 (325)
.++|+|+.+. .+.+++|-.||+|.||+-.. +.+ .....+.....+|+++... ++.|..|+.+ .|++.|
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~-~~~----~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEG-ETH----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEET-TEE----EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCC-CCC----ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 3689999886 45688888999999998542 111 1222333335899999876 4567777774 599999
Q ss_pred CCCCc--eeEecCCCCCceeEEEEeCC---eEEEEEeCCCeEEEEecCcccee
Q psy2153 88 PKSLK--SFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 88 ~~Tlk--sf~~~~~~~~~V~~Ma~~G~---GVWiS~~~ss~IrL~ha~T~e~L 135 (325)
..+.+ ...........|++++++.. ...++...+..|++||..+.+..
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~ 136 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT 136 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc
Confidence 88763 33333334578999999864 47778889999999999887443
No 60
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.65 E-value=0.0025 Score=59.76 Aligned_cols=123 Identities=7% Similarity=-0.046 Sum_probs=89.7
Q ss_pred CccceeeCCCc--eeeeEEeCCeEEEEecC-CcEEEEEcCCCCCCCCCCCeEEEcCCCCCce-eeeeeeCCEEEEEE--C
Q psy2153 7 TPYPLNKILDT--ALPPVHVQGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCGY--K 80 (325)
Q Consensus 7 ~~L~~IkL~ds--Vl~I~~~~~~VfVgLAN-GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV-~cml~v~~~LW~g~--g 80 (325)
+.++++..... .+-|.+.++++|++..+ |+|.+|+-..+ +....+ ++. .+. -.+...+++||.+. .
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tg-----kv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESA-----QPVWME-RLG--NIFAEGLASDGERLYQLTWTE 115 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCS-----SCSEEE-ECT--TCCEEEEEECSSCEEEEESSS
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCC-----cEEeEE-CCC--CcceeEEEEeCCEEEEEEccC
Confidence 34455554433 47888889999999887 57888875442 223445 654 333 23677889999999 6
Q ss_pred CeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 81 NKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 81 nkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
++++|+|++|+ ++|..... . --++..|.-+|+|= .+..|+.+|++|++.+..|.+..
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~e-G---wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSGE-G---WGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSSC-C---CCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred CEEEEEECCcCcEEEEEeCCCc-e---eEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC
Confidence 88999999999 56666432 1 34567888899985 69999999999999999998854
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.65 E-value=0.0017 Score=60.21 Aligned_cols=123 Identities=15% Similarity=0.127 Sum_probs=87.9
Q ss_pred CCceeeeEEe---CCeEEEEecCCcEEEEEcCCCCC-CCCCCC-eEEEcCCCCCceeeeeeeCC---EEEEEECC-eEEE
Q psy2153 15 LDTALPPVHV---QGRVVCALADGSVAIFRRGPDGQ-WDLSKY-HTVTLGLPHHSVRSLAAVYN---KVWCGYKN-KIHV 85 (325)
Q Consensus 15 ~dsVl~I~~~---~~~VfVgLANGtLaVF~R~~~g~-WD~~~~-~~I~LG~~~~PV~cml~v~~---~LW~g~gn-kI~V 85 (325)
.++|+++.+. ++.++.|-.||+|.||+-...+. +....+ ..+. |. ..+|+++....+ .|..|+.+ .|.+
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h-~~~v~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GH-TKRVGIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CC-SSCEEEEEECSSBTTEEEEEETTSCEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CC-CCeEEEEEECcCCCCEEEEEcCCCEEEE
Confidence 4689999995 45788888999999999655432 122222 3333 32 378999988753 56666664 5999
Q ss_pred EcCCCCceeEec--CCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 86 VDPKSLKSFDAH--PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 86 In~~Tlksf~~~--~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.|.++.+....- ......|++++++.+| ..++...+..|++||..+.+.++.+.
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 215 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD 215 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec
Confidence 999988433222 2334789999998555 55577789999999999999998884
No 62
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.63 E-value=0.0017 Score=60.29 Aligned_cols=127 Identities=13% Similarity=0.063 Sum_probs=95.6
Q ss_pred CCCccceeeCCCc--eeeeEEeC-CeEEEEec---CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCce-eeeeeeCCEEEE
Q psy2153 5 HPTPYPLNKILDT--ALPPVHVQ-GRVVCALA---DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWC 77 (325)
Q Consensus 5 ~~~~L~~IkL~ds--Vl~I~~~~-~~VfVgLA---NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV-~cml~v~~~LW~ 77 (325)
.++.+.++.++.. ..-|.+.+ +++|++.. +++|.+++-..+ +....+.++. .|. -.+...+++||.
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-----~v~~~i~l~~--~~fgeGi~~~g~~lyv 80 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTG-----KVENIHKMDD--SYFGEGLTLLNEKLYQ 80 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTC-----CEEEEEECCT--TCCEEEEEEETTEEEE
T ss_pred CceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCC-----CEEEEEecCC--CcceEEEEEeCCEEEE
Confidence 3567888888865 57888876 89999975 478999986543 2234577765 333 246677899999
Q ss_pred EE--CCeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 78 GY--KNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 78 g~--gnkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
+. .+.|+|+|++|+ ++|.+. .++. ..+..+|.-+|+|- .+..|..+|++|++.+..|.+..
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~i~~g-~~~g--~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKNFTHQ-MKDG--WGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECC-SSSC--CEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred EEecCCEEEEEECCCCcEEEEEECC-CCCe--EEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECC
Confidence 99 477999999999 466655 1221 33777888899986 78999999999999999998864
No 63
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.60 E-value=0.00078 Score=69.28 Aligned_cols=117 Identities=9% Similarity=0.018 Sum_probs=74.4
Q ss_pred CceeeeEEe-CCe-EEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee---CCEEEEEE-CCeEEEEcCC
Q psy2153 16 DTALPPVHV-QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGY-KNKIHVVDPK 89 (325)
Q Consensus 16 dsVl~I~~~-~~~-VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v---~~~LW~g~-gnkI~VIn~~ 89 (325)
..|.+|... +++ +|+|..+|-|..|++..+..-.......-.-+.+...|+++..- ++.||++. .+.|+.++++
T Consensus 66 n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~ 145 (781)
T 3v9f_A 66 NELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIA 145 (781)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETT
T ss_pred cccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECC
Confidence 358888775 477 99999996799999765431000000000001122468888765 47999999 7889999987
Q ss_pred CC--ceeEecC---CCCCceeEEEEe-CCeEEEEEeCCCeEEEEecCccc
Q psy2153 90 SL--KSFDAHP---RRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 90 Tl--ksf~~~~---~~~~~V~~Ma~~-G~GVWiS~~~ss~IrL~ha~T~e 133 (325)
+. +.+.... -+...|.+|+.. ...+|++.... -|..||..+.+
T Consensus 146 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~~-Gl~~~~~~~~~ 194 (781)
T 3v9f_A 146 TGKFTHYNKSTVPALPSEQTWTATEAEDGKLYIGHVEG-GLSILSLNDKS 194 (781)
T ss_dssp TTEEEEESTTTCTTCSCCCEEEEEEEETTEEEEEETTT-EEEEEETTTTE
T ss_pred CCeEEeeccCcccCCCccceEEEEECCCCCEEEEecCC-CeEEEcCCCCc
Confidence 75 2332111 123568888876 56799986553 47888887754
No 64
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.60 E-value=0.027 Score=51.24 Aligned_cols=123 Identities=15% Similarity=0.121 Sum_probs=81.0
Q ss_pred ccceeeC-CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-
Q psy2153 8 PYPLNKI-LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN- 81 (325)
Q Consensus 8 ~L~~IkL-~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn- 81 (325)
.+..++. +..|.++.+. .+.+++|-.+|++.+|+-.... ....+.....+|+++.... ..|..|+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~-------~~~~~~~~~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 114 QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK-------KEYSLDTRGKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCS-------EEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc-------eeEEecCCCceEEEEEECCCCCEEEEEcCCC
Confidence 3344433 3467777775 3478888899999999854321 2223333346788887764 456667664
Q ss_pred eEEEEcCCCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeee
Q psy2153 82 KIHVVDPKSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD 137 (325)
Q Consensus 82 kI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~Lqd 137 (325)
.|.+.|.++.+....-......|++++.+.+| .-++...+.+|++||..+.+.+..
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE
Confidence 49999999884332222233779999998666 555677899999999987765543
No 65
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.00093 Score=60.83 Aligned_cols=125 Identities=11% Similarity=0.083 Sum_probs=85.1
Q ss_pred CccceeeCC--CceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC--EEEEE
Q psy2153 7 TPYPLNKIL--DTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCG 78 (325)
Q Consensus 7 ~~L~~IkL~--dsVl~I~~~~----~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~--~LW~g 78 (325)
+.++.++++ +.|.++.+.. +.+..|-.||+|.+|+-.... ...+.-+....+|+|+....+ .|-.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~------~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS------QYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC------EEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc------EEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 345566655 6799999854 456668889999999854321 111222333457999887754 34444
Q ss_pred EC-CeEEEEcCCCCc----eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 79 YK-NKIHVVDPKSLK----SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 79 ~g-nkI~VIn~~Tlk----sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+. +.|.+.|.++.+ .|+. .....|++++.+.+|-|++...+..|++||..+.+.++.+.
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~ 252 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPV--DEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYP 252 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCC--CTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSC
T ss_pred cCCCEEEEEECCCCCCCccEEec--cCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeec
Confidence 54 459999999883 3444 13478999999988877776667799999999988766544
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.57 E-value=0.0051 Score=57.16 Aligned_cols=123 Identities=17% Similarity=0.193 Sum_probs=90.3
Q ss_pred CccceeeC--CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECC-
Q psy2153 7 TPYPLNKI--LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN- 81 (325)
Q Consensus 7 ~~L~~IkL--~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gn- 81 (325)
+..+.+.. .+.|.++.+.. +.+++|..||+|.+|+-.... ..-.+-....+|.++..-++.+..|+.+
T Consensus 124 ~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 196 (401)
T 4aez_A 124 SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT-------KLRTMAGHQARVGCLSWNRHVLSSGSRSG 196 (401)
T ss_dssp CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe-------EEEEecCCCCceEEEEECCCEEEEEcCCC
Confidence 34455555 57899999964 478889999999999854321 2223322347899998878888888875
Q ss_pred eEEEEcCCCC----ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 82 KIHVVDPKSL----KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 82 kI~VIn~~Tl----ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.|.+.|.++. +.+..|. ..|.+++++.+| ..++...+..|++||..+.+.+..+.
T Consensus 197 ~i~i~d~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 197 AIHHHDVRIANHQIGTLQGHS---SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp EEEEEETTSSSCEEEEEECCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred CEEEEecccCcceeeEEcCCC---CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence 5999998854 3444444 789999998665 55667788999999999988887764
No 67
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.57 E-value=0.029 Score=50.94 Aligned_cols=114 Identities=18% Similarity=0.135 Sum_probs=76.2
Q ss_pred CCceeeeEE--------eCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eE
Q psy2153 15 LDTALPPVH--------VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KI 83 (325)
Q Consensus 15 ~dsVl~I~~--------~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI 83 (325)
.+.|.++.+ ....++.|-.||+|.+|+-.....-.........+.....+|+++.... ..|-.|+.+ .|
T Consensus 21 ~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v 100 (343)
T 2xzm_R 21 SDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTL 100 (343)
T ss_dssp SSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEE
T ss_pred hhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 468999987 2345777778999999985432210000011122322347899987764 345556654 59
Q ss_pred EEEcCCCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCc
Q psy2153 84 HVVDPKSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 84 ~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T 131 (325)
.+.|.++. +.|..|. ..|++++.+.+| .-++...+.+|++||...
T Consensus 101 ~lwd~~~~~~~~~~~~h~---~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQ---SEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEEETTSSCEEEEEECCC---SCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred EEEECCCCcEEEEEcCCC---CcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 99999887 4566665 679999998655 456778899999999863
No 68
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0026 Score=59.19 Aligned_cols=134 Identities=8% Similarity=0.108 Sum_probs=88.8
Q ss_pred CccceeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcC--CCCCC----CCCCCeEEEcCC--CCCceeeeeee----C
Q psy2153 7 TPYPLNKILDTALPPVHVQ--GRVVCALADGSVAIFRRG--PDGQW----DLSKYHTVTLGL--PHHSVRSLAAV----Y 72 (325)
Q Consensus 7 ~~L~~IkL~dsVl~I~~~~--~~VfVgLANGtLaVF~R~--~~g~W----D~~~~~~I~LG~--~~~PV~cml~v----~ 72 (325)
+......-.++|.|+.+.. +.+++|-.||+|.+|+-. ..|.- .....+.+.+.. ....+.|+... +
T Consensus 103 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (437)
T 3gre_A 103 SSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK 182 (437)
T ss_dssp SCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC
T ss_pred ceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC
Confidence 3344556688999999975 568889999999999753 12210 000111222221 22456676644 4
Q ss_pred CEEEEEEC-CeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 73 NKVWCGYK-NKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 73 ~~LW~g~g-nkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
..|.+|+. +.|.+.|.++. +.+..+. ....|++++.+.+| .-++...+.+|++||..+.+.++.+.+.
T Consensus 183 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 255 (437)
T 3gre_A 183 SLLVALTNLSRVIIFDIRTLERLQIIENSP-RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG 255 (437)
T ss_dssp EEEEEEETTSEEEEEETTTCCEEEEEECCG-GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeEEEccCC-CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC
Confidence 56777777 55999999888 3455421 23689999998666 4455778999999999998888877653
No 69
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.54 E-value=0.0045 Score=55.48 Aligned_cols=118 Identities=16% Similarity=0.203 Sum_probs=85.4
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC----CEEEEEECC-eEEEE
Q psy2153 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYKN-KIHVV 86 (325)
Q Consensus 15 ~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~----~~LW~g~gn-kI~VI 86 (325)
.+.|.|+.+.. +.+..|-.||+|.+|+.... .....+..+. ..+|.++.... ..|-.|+.+ .|.+.
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~-----~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW 213 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----TPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCS-----SCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC-----CccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 35799999863 46778889999999985332 2223444443 35677765542 356667664 59999
Q ss_pred cCCCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 87 DPKSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 87 n~~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
|.++. +.++.|. ..|+.++....+ .-++...+.+|++||..|.+.++.++..
T Consensus 214 d~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 214 DYQTKSCVATLEGHM---SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp ETTTTEEEEEEECCS---SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCS
T ss_pred eCCCCccceeeCCCC---CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCC
Confidence 99887 4556665 679998888665 6668889999999999999999888754
No 70
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.53 E-value=0.042 Score=50.57 Aligned_cols=115 Identities=22% Similarity=0.197 Sum_probs=79.9
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~ 89 (325)
.++|.|+.+.. .+++.|-.||+|.||+-... ...+.+... ..+|.++.... ..|-+|+. ++|.+.+..
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-----~~~~~~~~~--~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-----NKEHAVTMP--CTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEEEEECS--SSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-----CcceEEecC--CCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 36899999864 47888999999999984321 222444443 36788877664 45555555 447777654
Q ss_pred CC---------ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 90 SL---------KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 90 Tl---------ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.. +.+..|. ..|+.++...++ .-++...+.+|++||.++.+.++.+.
T Consensus 137 ~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHT---NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH 193 (354)
T ss_dssp CCTTCCSGGGCEEEEECS---SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ccccccccccceeeeccC---CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence 32 3555665 678888887665 56688899999999999988776553
No 71
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.52 E-value=0.0044 Score=63.48 Aligned_cols=110 Identities=14% Similarity=0.129 Sum_probs=71.4
Q ss_pred CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE---EcCCCCCceeeeeee-CCEEEEEECCeEEEEcCCC
Q psy2153 15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV---TLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKS 90 (325)
Q Consensus 15 ~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I---~LG~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~T 90 (325)
+..|.+|.-.++.+|+|..+ -|..|+.... .. +.+ .-+.+...|+++..- ++.||+|..+-++.+++++
T Consensus 102 ~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~-~~-----~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~ 174 (758)
T 3ott_A 102 PTDVRTMALQGDTLWLGALN-GLYTYQLQSR-KL-----TSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSN 174 (758)
T ss_dssp CSCEEEEEEETTEEEEEETT-EEEEEETTTC-CE-----EEECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTT
T ss_pred CceEEEEEecCCcEEEEcCC-cceeEeCCCC-eE-----EEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCC
Confidence 34577777778899999877 5778875432 11 111 113334668887766 6899999998899999877
Q ss_pred C--ceeEecCC---CCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccc
Q psy2153 91 L--KSFDAHPR---RESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 91 l--ksf~~~~~---~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e 133 (325)
. +.+..... ....|..|..+.. .+|++... -|..||..+.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~--Gl~~~~~~~~~ 222 (758)
T 3ott_A 175 GKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG--YLFQYFPSTGQ 222 (758)
T ss_dssp TEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE--EEEEEETTTTE
T ss_pred CceEEecCCCccccccceeEEEEEECCCCEEEEEECC--CCeEEcCCCCe
Confidence 6 22221111 2345888888743 38998853 47778877643
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.0019 Score=60.08 Aligned_cols=130 Identities=10% Similarity=0.065 Sum_probs=91.3
Q ss_pred CCCccceeeC---CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee----CC--
Q psy2153 5 HPTPYPLNKI---LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YN-- 73 (325)
Q Consensus 5 ~~~~L~~IkL---~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v----~~-- 73 (325)
..+.++.++. .+.|.++.+. .+.+++|-.||+|.+|+-.. + ...+.+.++. ..+|+++... .+
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~----~~~~~~~~~~-~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-N----VLIRSWSFGD-HAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-T----EEEEEEBCTT-CEEEEEEEECTTTCTTEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-c----cEEEEEecCC-CCceEEEEeccccCCCcc
Confidence 3456667776 4799999985 45688899999999998533 1 1123344443 3689998444 22
Q ss_pred EEEEEECCe-EEEEcCCCC---ceeEecC-----------------------CCCCceeEEEEeCCeEEEEEeCCCeEEE
Q psy2153 74 KVWCGYKNK-IHVVDPKSL---KSFDAHP-----------------------RRESQVRQMTWAGDGVWVSIRLDSTLRM 126 (325)
Q Consensus 74 ~LW~g~gnk-I~VIn~~Tl---ksf~~~~-----------------------~~~~~V~~Ma~~G~GVWiS~~~ss~IrL 126 (325)
.|.+|+.+. |.+.|.++. +.|..|. .....|++++.++...-++...+..|++
T Consensus 275 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~ 354 (437)
T 3gre_A 275 IVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVM 354 (437)
T ss_dssp EEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEE
T ss_pred EEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEE
Confidence 456666655 999999887 3444332 1345688999996667788888999999
Q ss_pred EecCccceeeeeec
Q psy2153 127 YNAHTYQHLQDVDI 140 (325)
Q Consensus 127 ~ha~T~e~LqdIdI 140 (325)
||..+.+.++.+.-
T Consensus 355 wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 355 FSLNELSSSKAVIS 368 (437)
T ss_dssp EETTCGGGCEEEEC
T ss_pred EECCCcccceEEec
Confidence 99999998877653
No 73
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.51 E-value=0.0021 Score=56.91 Aligned_cols=130 Identities=10% Similarity=0.115 Sum_probs=91.8
Q ss_pred CCCCccceeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCC-CCCceeeeeeeC--C----EEE
Q psy2153 4 PHPTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVY--N----KVW 76 (325)
Q Consensus 4 ~~~~~L~~IkL~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~-~~~PV~cml~v~--~----~LW 76 (325)
...+.++.++.++.+.++....+.++++..+|.+.+|+-.... .....+.. ...+++++.... . .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 159 RSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP------SEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp SCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC------EEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc------chhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 4567888999999999999999999999999999999854321 11122221 124555655442 1 277
Q ss_pred EEECCe-EEEEcCCCC------ceeEecCCCC---------CceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 77 CGYKNK-IHVVDPKSL------KSFDAHPRRE---------SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 77 ~g~gnk-I~VIn~~Tl------ksf~~~~~~~---------~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+++.+. |.+.+..+. ..|..|.... ..|++++.+.+| .-++...+..|++||..+.+.++.+.
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 777754 888888775 3455554211 269999998666 55577789999999999999888765
No 74
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.50 E-value=0.028 Score=52.02 Aligned_cols=115 Identities=18% Similarity=0.254 Sum_probs=78.6
Q ss_pred CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE-EcCC-----CCCceeeeeee--C-CEEEEEECC-e
Q psy2153 16 DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGL-----PHHSVRSLAAV--Y-NKVWCGYKN-K 82 (325)
Q Consensus 16 dsVl~I~~~---~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I-~LG~-----~~~PV~cml~v--~-~~LW~g~gn-k 82 (325)
+.|.++.+. +.+++.|-.||+|.+|+-..+ +.+ .++. ...+|.++... + +.+-.|+.+ .
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~--------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTG--------QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC--------CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred cceEEEEEecCCCCEEEEECCCCcEEEEEcCCC--------cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 356666665 346888999999999864332 122 1211 13578887653 3 455566654 4
Q ss_pred EEEEcCCCC----ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 83 IHVVDPKSL----KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 83 I~VIn~~Tl----ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
|.+.|.++. +.|..|. ..|++++.+.+| ..++...+.+|++||..+.+.++.++..
T Consensus 230 v~~wd~~~~~~~~~~~~~h~---~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHE---GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp EEEEETTTTCCCCEEECCCS---SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred EEEEECCCCCcceEEECCcC---CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 999998643 4555555 679999998665 6668889999999999999888776654
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.49 E-value=0.0031 Score=60.54 Aligned_cols=125 Identities=12% Similarity=0.113 Sum_probs=92.5
Q ss_pred CCCccceeeCCCceeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCCCeE--EEcCCCCCceeeeeeeC--CEEEEEE
Q psy2153 5 HPTPYPLNKILDTALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT--VTLGLPHHSVRSLAAVY--NKVWCGY 79 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~--I~LG~~~~PV~cml~v~--~~LW~g~ 79 (325)
..+.++.++.+..|.++.+..+.+++|.. +|+|.+|+.... +. ..+.....+|+++.... ..|..|+
T Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~--------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 507 (615)
T 1pgu_A 436 TGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL--------EVSFDLKTPLRAKPSYISISPSETYIAAGD 507 (615)
T ss_dssp TCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE--------EEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCc--------cccccccCCccCceEEEEECCCCCEEEEcC
Confidence 56778888899999999999888888888 999999985432 11 23333347899988864 4677777
Q ss_pred C-CeEEEEcCCCCceeEecCC-CCCceeEEEEeC----------Ce-EEEEEeCCCeEEEEecCcc-ceeee
Q psy2153 80 K-NKIHVVDPKSLKSFDAHPR-RESQVRQMTWAG----------DG-VWVSIRLDSTLRMYNAHTY-QHLQD 137 (325)
Q Consensus 80 g-nkI~VIn~~Tlksf~~~~~-~~~~V~~Ma~~G----------~G-VWiS~~~ss~IrL~ha~T~-e~Lqd 137 (325)
. ++|++.+.++.+....... ....|++++.+. +| ..++...+..|++||.++. +.++.
T Consensus 508 ~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 508 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence 6 4599999998844332222 347899999976 44 6667778999999999997 55554
No 76
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.49 E-value=0.0015 Score=60.92 Aligned_cols=124 Identities=12% Similarity=0.044 Sum_probs=90.4
Q ss_pred CCccceeeCCCce--eeeEEeCCeEEEEecC-C--cEEEEEcCCCCCCCCCCCeEEEcCCCCCce-eeeeeeCCEEEEEE
Q psy2153 6 PTPYPLNKILDTA--LPPVHVQGRVVCALAD-G--SVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVYNKVWCGY 79 (325)
Q Consensus 6 ~~~L~~IkL~dsV--l~I~~~~~~VfVgLAN-G--tLaVF~R~~~g~WD~~~~~~I~LG~~~~PV-~cml~v~~~LW~g~ 79 (325)
++.++++.-...- .-|.+.++++|++..+ | +|.+|+-..+ +.-..+.++. .+. -.+...+++||.+.
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tg-----kv~~~~~l~~--~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESG-----KTLQQIELGK--RYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTC-----CEEEEEECCT--TCCEEEEEEETTEEEEEE
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCC-----cEEEEEecCC--ccceeEEEEeCCEEEEEE
Confidence 3455555544433 7788889999999975 4 7999875442 2224566754 443 24677899999999
Q ss_pred --CCeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 80 --KNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 80 --gnkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
.++++|+|++|+ ++|....+ . --++..|.-+|+|= .+..|+.+|++|++.+..|.+.
T Consensus 104 w~~~~v~v~D~~t~~~~~ti~~~~e-G---~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRSFNYDGE-G---WGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp SSSSEEEEEETTTCCEEEEEECSSC-C---CCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECE
T ss_pred eeCCEEEEEECccCcEEEEEECCCC-c---eEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEec
Confidence 688999999999 46666431 1 23556788899885 5889999999999999999986
No 77
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.47 E-value=0.0036 Score=57.10 Aligned_cols=121 Identities=8% Similarity=0.029 Sum_probs=85.9
Q ss_pred CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCC-CCCceeeeeeeC--CEEEEEEC-CeEEEE
Q psy2153 14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVY--NKVWCGYK-NKIHVV 86 (325)
Q Consensus 14 L~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~-~~~PV~cml~v~--~~LW~g~g-nkI~VI 86 (325)
-.+.|.++.+.. +.++++-.||+|.+|+... .....+.-.. ...+|+++.... ..|..|+. +.|.+.
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 190 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG------SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLL 190 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS------CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEE
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC------CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEE
Confidence 457999999976 5788888999999998542 1112222211 126799987774 57777777 459999
Q ss_pred cCCCC--ceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCc----cceeeeeecchh
Q psy2153 87 DPKSL--KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT----YQHLQDVDIEPY 143 (325)
Q Consensus 87 n~~Tl--ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T----~e~LqdIdIa~~ 143 (325)
|.+.. +.+..|. ..|+++++...+ +.++...+.+|++||..+ .+.+..+.-...
T Consensus 191 d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 252 (383)
T 3ei3_B 191 GLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKP 252 (383)
T ss_dssp ETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSC
T ss_pred ECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCc
Confidence 98543 4555554 789999998766 888999999999999998 556666543333
No 78
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.46 E-value=0.01 Score=52.61 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=89.1
Q ss_pred CCCCccceeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEE
Q psy2153 4 PHPTPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG 78 (325)
Q Consensus 4 ~~~~~L~~IkL-~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g 78 (325)
|.+++...++= .++|.++.+.. +.++.|-.||+|.+|+... +. ..-.+.....+|+++.... +.|..|
T Consensus 11 ~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~-~~------~~~~~~~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 11 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GK------FEKTISGHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp CCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CC------EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCC-cc------cchhhccCCCceEEEEEcCCCCEEEEE
Confidence 44555444433 36899999864 4688888999999997432 21 1122322247899987764 456666
Q ss_pred ECC-eEEEEcCCCCc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 79 YKN-KIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 79 ~gn-kI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
+.+ .|.+.|.++.+ .+..|. ..|.+++....+ ..++...+..|++||..+.+.++.+..
T Consensus 84 ~~d~~i~vwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 147 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKCLKTLKGHS---NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA 147 (312)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCS---SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCCCEEEEEECCCCcEEEEEcCCC---CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC
Confidence 664 59999998873 455554 679999887654 667788899999999999998887764
No 79
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.46 E-value=0.012 Score=53.20 Aligned_cols=111 Identities=13% Similarity=0.096 Sum_probs=77.2
Q ss_pred CceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 16 DTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 16 dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
+.|.++.+.. +.++.|-.||+|.+++...+..- ... ..-.+.....+|+++.... ..|-.|+.+ .|.+.|.+
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~-~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~ 95 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK-FGV-PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVA 95 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE-EEE-EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc-ccc-cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 5899999863 46888889999999985432110 000 1122222247899887764 356666664 59999999
Q ss_pred CC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCc
Q psy2153 90 SL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 90 Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T 131 (325)
+. +.|..|. ..|.+++....+ ..++...+.+|++||...
T Consensus 96 ~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 96 TGETYQRFVGHK---SDVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp TTEEEEEEECCS---SCEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred CCCeeEEEccCC---CcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 88 4555555 679999988655 677889999999999753
No 80
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.46 E-value=0.07 Score=49.58 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=79.5
Q ss_pred ceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCCCC
Q psy2153 17 TALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSL 91 (325)
Q Consensus 17 sVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~Tl 91 (325)
.|.++.+.. .+++.|-.||+|.+|+.... .....+.....+|+++.... +.|..|+.+ .|.+.|.++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~-------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENR-------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCC-------cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 388888863 46778888999999874321 11223322347899987763 577777775 4999999887
Q ss_pred cee-EecCCCCCceeEEEEeC-Ce-EEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 92 KSF-DAHPRRESQVRQMTWAG-DG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 92 ksf-~~~~~~~~~V~~Ma~~G-~G-VWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
+.. ... ....|+.++... +| ..++...+.+|++||..+.+.++.++.
T Consensus 198 ~~~~~~~--~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~ 247 (393)
T 1erj_A 198 QCSLTLS--IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS 247 (393)
T ss_dssp EEEEEEE--CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-
T ss_pred eeEEEEE--cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc
Confidence 322 221 135688888864 44 667788899999999999988877753
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.44 E-value=0.035 Score=59.01 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=89.5
Q ss_pred CccceeeC-CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--C--EEEEEE
Q psy2153 7 TPYPLNKI-LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N--KVWCGY 79 (325)
Q Consensus 7 ~~L~~IkL-~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~--~LW~g~ 79 (325)
+.++.++- .+.|.++.+.. +.+.+|-.||+|.||+-... +....+.- ...+|+|+.... + .+..|+
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~-----~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~ 720 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG-----KLVHTYDE--HSEQVNCCHFTNKSNHLLLATGS 720 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----CEEEEEEC--CSSCEEEEEECSSSSCCEEEEEE
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC-----ceEEEEcC--CCCcEEEEEEecCCCceEEEEEe
Confidence 44455542 46899999863 46888888999999985432 11122332 347899988875 3 344455
Q ss_pred C-CeEEEEcCCCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 80 K-NKIHVVDPKSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 80 g-nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
. +.|.+.|..+.+...........|++++.+.+| ..++...+.+|++||..+.+.++.++...
T Consensus 721 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 785 (1249)
T 3sfz_A 721 NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785 (1249)
T ss_dssp TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCC
T ss_pred CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccc
Confidence 5 459999998884332222334789999998665 66678889999999999999999887654
No 82
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.44 E-value=0.0051 Score=55.67 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=85.7
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC--------EEEEEECCe-E
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--------KVWCGYKNK-I 83 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~--------~LW~g~gnk-I 83 (325)
++.|.++.+.. +.++.|-.||+|.+|+-. ......+-....+|+++....+ .+..|+.+. |
T Consensus 107 ~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i 178 (319)
T 3frx_A 107 KSDVMSVDIDKKASMIISGSRDKTIKVWTIK--------GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178 (319)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSCEEEEETT--------SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC--------CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEE
Confidence 46788888763 468888889999998742 2223333223467888776642 567777654 9
Q ss_pred EEEcCCCCc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecchhhh
Q psy2153 84 HVVDPKSLK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 145 (325)
Q Consensus 84 ~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v~ 145 (325)
.+.|.++.+ .|..|. ..|++++.+.+| .-++...+.+|++||..+.+.++.+.....|.
T Consensus 179 ~~wd~~~~~~~~~~~~h~---~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~ 241 (319)
T 3frx_A 179 KAWNLNQFQIEADFIGHN---SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241 (319)
T ss_dssp EEEETTTTEEEEEECCCC---SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEE
T ss_pred EEEECCcchhheeecCCC---CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEE
Confidence 999998873 444444 789999998776 44567789999999999999999887654433
No 83
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.44 E-value=0.058 Score=50.36 Aligned_cols=118 Identities=14% Similarity=0.163 Sum_probs=82.9
Q ss_pred CccceeeCC---CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECC
Q psy2153 7 TPYPLNKIL---DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN 81 (325)
Q Consensus 7 ~~L~~IkL~---dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gn 81 (325)
+.++.+++. +.|+|+.+.. +.+.+|..||+|.+|+-.... ..-.+-....++.|+..-+..|..|+.+
T Consensus 136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~-------~~~~~~~h~~~v~~~s~~~~~l~sgs~d 208 (420)
T 4gga_A 136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-------RLRNMTSHSARVGSLSWNSYILSSGSRS 208 (420)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEETTEEEEEETT
T ss_pred CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc-------EEEEEeCCCCceEEEeeCCCEEEEEeCC
Confidence 445556664 4799999973 578889999999998743321 1122222247888888777888888875
Q ss_pred e-EEEEcCCCC----ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccce
Q psy2153 82 K-IHVVDPKSL----KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 82 k-I~VIn~~Tl----ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~ 134 (325)
. +.+.+..+. ..+..|. ..+..+.....| ..++...+..+++|+..+.+.
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h~---~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~ 264 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGHS---QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 264 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECCS---SCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred CceeEeeecccceeeEEecccc---cceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence 5 888887765 3445554 678888887555 556778899999999987663
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.42 E-value=0.052 Score=47.19 Aligned_cols=119 Identities=15% Similarity=0.178 Sum_probs=81.1
Q ss_pred CccceeeCC---CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECC
Q psy2153 7 TPYPLNKIL---DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN 81 (325)
Q Consensus 7 ~~L~~IkL~---dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gn 81 (325)
+.++.+++. +.|+|+.+.. +.++.|-.||+|.+|+-.... ..+.+. |. ..++.++...+..+..|+.+
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~-----~~~~~~-~h-~~~~~~~~~~~~~l~s~~~~ 128 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK-----RLRNMT-SH-SARVGSLSWNSYILSSGSRS 128 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEEE-CC-SSCEEEEEEETTEEEEEETT
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce-----eEEEec-Cc-cceEEEeecCCCEEEEEecC
Confidence 455666664 4699999864 578889999999998754321 112222 22 36788888888888888876
Q ss_pred e-EEEEcCCCC----ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcccee
Q psy2153 82 K-IHVVDPKSL----KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 82 k-I~VIn~~Tl----ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~L 135 (325)
. +.+.+..+. +.+..|. ..+..++....| .-++...+.+|++||..+.+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 129 GHIHHHDVRVAEHHVATLSGHS---QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp SEEEEEETTSSSCEEEEEECCS---SCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred CceEeeecCCCceeEEEEcCcc---CceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 5 666666555 2334444 667777776554 5567888999999999987643
No 85
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0041 Score=56.69 Aligned_cols=119 Identities=13% Similarity=0.204 Sum_probs=85.4
Q ss_pred CCCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCC----CCceeeeeeeCC---EEEEEECC--
Q psy2153 14 ILDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLP----HHSVRSLAAVYN---KVWCGYKN-- 81 (325)
Q Consensus 14 L~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~----~~PV~cml~v~~---~LW~g~gn-- 81 (325)
-.+.|.++.+.. +.++++-.||+|.+|+..... ....+....+ ..+|+++....+ .+..++.+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK-----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE-----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC-----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 457899999974 367778899999999854321 1122222210 478999988753 57777776
Q ss_pred --eEEEEcCCCC----ceeE-ecCCCCCceeEEEEeC--CeEEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 82 --KIHVVDPKSL----KSFD-AHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 82 --kI~VIn~~Tl----ksf~-~~~~~~~~V~~Ma~~G--~GVWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
.|.++|.++. +.+. .| ...|++++++. ....++...+..|++||..+.+.++.+.-
T Consensus 239 ~~~i~~~d~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQTLNQGH---QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SCCCCEEETTSTTSCSBCCCSCC---SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CceEEEEeCCCCCCCcEEeecCc---cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 8999999875 3344 34 47899999974 44666788899999999999998887763
No 86
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.41 E-value=0.048 Score=49.74 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=75.8
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE-EcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcC
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDP 88 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I-~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~ 88 (325)
.+.|.++.+. .+.++.|-.||+|.+|+-.... ....+ .+.....+|+++.... ..|-.|+.+ .|.+.+.
T Consensus 105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~ 179 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-----EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYRE 179 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-----CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-----CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEe
Confidence 3589999986 3467778889999999864432 11222 2333347899887764 456666665 4889887
Q ss_pred CCC-----ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccc
Q psy2153 89 KSL-----KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 89 ~Tl-----ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e 133 (325)
++. ..++.|. ..|+.++.+.+| .-++...+.+|++|+..+..
T Consensus 180 ~~~~~~~~~~~~~h~---~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 180 EEDDWVCCATLEGHE---STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp ETTEEEEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred cCCCEEEEEEecCCC---CceEEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 765 2344444 789999998666 55677889999999865433
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.40 E-value=0.0015 Score=57.95 Aligned_cols=125 Identities=10% Similarity=0.134 Sum_probs=83.0
Q ss_pred CCccceeeCCCceeeeEEeC-----CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC---EEEE
Q psy2153 6 PTPYPLNKILDTALPPVHVQ-----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN---KVWC 77 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~-----~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~---~LW~ 77 (325)
.+.+.....++.|.++.+.. +.+++|-.+|+|.+|+...... ........+.....+|+++....+ .+.+
T Consensus 200 ~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 200 MALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP--TKGFASVSEKAHKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp TEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET--TTEEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred CceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc--ccceeeeccCCCcCCEEEEEECCCCCcEEEE
Confidence 34455667788999999964 7889999999999998543211 111111122122478999988864 3666
Q ss_pred EECC-eEEEEcCCCC----------------------ceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCcc
Q psy2153 78 GYKN-KIHVVDPKSL----------------------KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 78 g~gn-kI~VIn~~Tl----------------------ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~ 132 (325)
|+.+ .|.+.+.++. +.+..| ...|++++++.+| +.++...+..|++||..++
T Consensus 278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS---TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC---SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC---CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 6664 6999987643 223333 4789999998666 4447889999999999988
Q ss_pred cee
Q psy2153 133 QHL 135 (325)
Q Consensus 133 e~L 135 (325)
+.+
T Consensus 355 ~~i 357 (357)
T 3i2n_A 355 NKI 357 (357)
T ss_dssp ---
T ss_pred ccC
Confidence 754
No 88
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.40 E-value=0.0051 Score=57.10 Aligned_cols=131 Identities=14% Similarity=0.154 Sum_probs=96.1
Q ss_pred CCCccceeeCCCc--eeeeEEeCCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-
Q psy2153 5 HPTPYPLNKILDT--ALPPVHVQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK- 80 (325)
Q Consensus 5 ~~~~L~~IkL~ds--Vl~I~~~~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g- 80 (325)
.-|.++++.+++. ..-+...++++|++.- ++++.||+... .+....++.|. ..+. .+..=+++||++.+
T Consensus 53 tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t-----~~v~~~i~~g~-~~g~-glt~Dg~~l~vs~gs 125 (266)
T 2iwa_A 53 TGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT-----LSNIKNFTHQM-KDGW-GLATDGKILYGSDGT 125 (266)
T ss_dssp TCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTT-----TEEEEEEECCS-SSCC-EEEECSSSEEEECSS
T ss_pred CCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCC-----CcEEEEEECCC-CCeE-EEEECCCEEEEECCC
Confidence 4567778888763 2345666889999864 56899998643 23345677772 2343 24444678999887
Q ss_pred CeEEEEcCCCC---ceeEecCC--CCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 81 NKIHVVDPKSL---KSFDAHPR--RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 81 nkI~VIn~~Tl---ksf~~~~~--~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
++|++||++|+ +...+..+ +-..++.|...+.-+|++...+..|...|+.|.+.+..|++..
T Consensus 126 ~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g 192 (266)
T 2iwa_A 126 SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPN 192 (266)
T ss_dssp SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHH
T ss_pred CeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCC
Confidence 67999999998 45665543 3345778888866799999999999999999999999999974
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.40 E-value=0.018 Score=51.97 Aligned_cols=115 Identities=15% Similarity=0.151 Sum_probs=73.7
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
.+.|.++.+.. ++++.|-.||+|.+|+......|. ....+-....+|+++.... +.|..|+.+ .|.+.+.+
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK----QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE 130 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETTSSEEEC------CCC----CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-
T ss_pred CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee----eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEEC
Confidence 46899999874 468888889999999865433121 2334433457899988774 467777765 49998887
Q ss_pred CCce---e-EecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccc
Q psy2153 90 SLKS---F-DAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 90 Tlks---f-~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e 133 (325)
+.+. . .........|++++.+.+| .-++...+.+|++||..+.+
T Consensus 131 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 131 QENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp ----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred CcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 7632 1 2222145889999998766 55566788999999987655
No 90
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.40 E-value=0.043 Score=52.56 Aligned_cols=113 Identities=19% Similarity=0.268 Sum_probs=76.0
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC--EEEEEECC-eEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~--~LW~g~gn-kI~VIn~~ 89 (325)
.+.|.++.+.. ..+.+|-.+|++.+|+++. +....+. + ...+|+++....+ .|-.|+.+ .|.+.+..
T Consensus 344 ~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~------~~~~~~~-~-~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 344 SSSVWGVAFSPDGQTIASASDDKTVKLWNRNG------QLLQTLT-G-HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTC------CEEEEEE-C-CSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC------CEEEEec-C-CCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 45788888863 3677788999999998532 1112232 2 2478999877643 46666665 48898854
Q ss_pred CC--ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 90 SL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 90 Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.. +.+..|. ..|++++.+.++ ..++...+.+|++||. +.+.++.+.
T Consensus 416 ~~~~~~~~~~~---~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~ 464 (577)
T 2ymu_A 416 GQLLQTLTGHS---SSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT 464 (577)
T ss_dssp CCEEEEEECCS---SCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred CCEEEEecCCC---CCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc
Confidence 33 4555555 679999988665 5556678999999996 455555544
No 91
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.37 E-value=0.0019 Score=59.80 Aligned_cols=125 Identities=11% Similarity=0.139 Sum_probs=84.4
Q ss_pred CccceeeC-CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--C-EEEEEE
Q psy2153 7 TPYPLNKI-LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--N-KVWCGY 79 (325)
Q Consensus 7 ~~L~~IkL-~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~-~LW~g~ 79 (325)
+.+..++- .+.|.++.+.. ..+..+-.||+|.+|+-... +....+.......+++++.... + .|.+|+
T Consensus 172 ~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~-----~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 172 AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP-----KPATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS-----SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC-----ceeeeeeeccccccccchhhhhcccceEEEee
Confidence 34444444 46899998853 34667778899988763221 1112233333346788887653 3 456677
Q ss_pred CC-eEEEEcCCCC---ceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 80 KN-KIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 80 gn-kI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.+ .|.++|.++. +.+..|. ..|++++.+..| +-++...+.+||+||.++.+.++.+.
T Consensus 247 ~d~~i~~wd~~~~~~~~~~~~~~---~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~ 309 (357)
T 4g56_B 247 ETGNVSLVNIKNPDSAQTSAVHS---QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS 309 (357)
T ss_dssp SSSCEEEEESSCGGGCEEECCCS---SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC
T ss_pred cccceeEEECCCCcEeEEEeccc---eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC
Confidence 64 5999999887 4455554 679999987443 56678899999999999999888764
No 92
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.35 E-value=0.0047 Score=55.24 Aligned_cols=124 Identities=10% Similarity=0.048 Sum_probs=88.2
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCC--------CCCCCC--C-CCeEEEcCCCCCceeeeeeeC--CEEEEEE
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGP--------DGQWDL--S-KYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~--------~g~WD~--~-~~~~I~LG~~~~PV~cml~v~--~~LW~g~ 79 (325)
.+.|.+|.+.. +.+++|-.||+|.+|+-.. ...|.. . ......+.....+|+++.... +.|.+++
T Consensus 142 ~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 221 (372)
T 1k8k_C 142 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS 221 (372)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe
Confidence 56899999863 4688888999999998321 112322 1 112333433347899988764 4788888
Q ss_pred CC-eEEEEcCCCCc---eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCc----cceeeeeecc
Q psy2153 80 KN-KIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT----YQHLQDVDIE 141 (325)
Q Consensus 80 gn-kI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T----~e~LqdIdIa 141 (325)
.+ .|.++|.++.+ .+..| ...|++++.+.+|-+++...+..|++|+..+ ++.++.++..
T Consensus 222 ~d~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 288 (372)
T 1k8k_C 222 HDSTVCLADADKKMAVATLASE---TLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP 288 (372)
T ss_dssp TTTEEEEEEGGGTTEEEEEECS---SCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC
T ss_pred CCCEEEEEECCCCceeEEEccC---CCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCcc
Confidence 75 59999998874 44444 4679999999888888888999999999987 5677777654
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.34 E-value=0.0014 Score=59.58 Aligned_cols=123 Identities=7% Similarity=0.075 Sum_probs=85.9
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCC-CCCCCCCCe---EEEcCCCCCceeeeeeeC----CEEEEEECC-eEEEE
Q psy2153 16 DTALPPVHVQGRVVCALADGSVAIFRRGPD-GQWDLSKYH---TVTLGLPHHSVRSLAAVY----NKVWCGYKN-KIHVV 86 (325)
Q Consensus 16 dsVl~I~~~~~~VfVgLANGtLaVF~R~~~-g~WD~~~~~---~I~LG~~~~PV~cml~v~----~~LW~g~gn-kI~VI 86 (325)
++|.++.+... ++.|-.||++.+|+.+.. ..||+...+ .+.++. ..+|.++.... +.+..|+.+ .|.+.
T Consensus 77 ~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w 154 (343)
T 3lrv_A 77 PNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS-ANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154 (343)
T ss_dssp ECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC-SSCEEEEECCC---CCEEEEEETTCCEEEE
T ss_pred CCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC-CCCEEEEEcCCCCCCCEEEEEeCCCcEEEE
Confidence 45666666666 777777888888874321 136665554 344454 36899987754 355556654 59999
Q ss_pred cCCCCceeEec-CCCCCceeEEEEeCCeEEEEE-eCCCeEEEEecCcccee-eeeec
Q psy2153 87 DPKSLKSFDAH-PRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHL-QDVDI 140 (325)
Q Consensus 87 n~~Tlksf~~~-~~~~~~V~~Ma~~G~GVWiS~-~~ss~IrL~ha~T~e~L-qdIdI 140 (325)
|.++.+.+... ......|++++.+.+|-+++. ..+..|++||..+.+.+ ..+..
T Consensus 155 d~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 155 SYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp ESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred ECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 99988655433 223456999999988877775 78999999999999988 77766
No 94
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.34 E-value=0.0029 Score=63.22 Aligned_cols=118 Identities=21% Similarity=0.312 Sum_probs=81.7
Q ss_pred eeeeEEeC-CeEEEEe--cCCcEEEEEcCCCCC----CCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE--------C
Q psy2153 18 ALPPVHVQ-GRVVCAL--ADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--------K 80 (325)
Q Consensus 18 Vl~I~~~~-~~VfVgL--ANGtLaVF~R~~~g~----WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~--------g 80 (325)
...+.+-+ +++||+- .+++|.||+-+..+. |. ..+.+.... ..+..+... +..||++. .
T Consensus 373 g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~--~v~~l~~~g--~~~~~v~~~pdg~~l~v~~~~~~~~~~~ 448 (543)
T 1nir_A 373 GANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK--KVAELQGQG--GGSLFIKTHPKSSHLYVDTTFNPDARIS 448 (543)
T ss_dssp CEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTS--EEEEEECSC--SCCCCEECCTTCCEEEECCTTCSSHHHH
T ss_pred CcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCe--EEEEEEcCC--CCceEEEcCCCCCcEEEecCCCCCcccC
Confidence 33444444 7899874 579999999765433 43 234566532 233333333 46899997 4
Q ss_pred CeEEEEcCCCCc-eeEe---c-----CCCCCceeEEEEe--CCeEEEEEe----CCCeEEEEecCccceeeeee
Q psy2153 81 NKIHVVDPKSLK-SFDA---H-----PRRESQVRQMTWA--GDGVWVSIR----LDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 81 nkI~VIn~~Tlk-sf~~---~-----~~~~~~V~~Ma~~--G~GVWiS~~----~ss~IrL~ha~T~e~LqdId 139 (325)
+.|.|+|.+|++ .++. . +.....|.+++.. |.-||+|.. .++.|.+||.+|+|+++.|.
T Consensus 449 ~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 449 QSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp TCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 589999999993 2232 1 2345778899887 566999986 36999999999999999887
No 95
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.33 E-value=0.0091 Score=54.39 Aligned_cols=114 Identities=18% Similarity=0.184 Sum_probs=81.6
Q ss_pred CceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCCC
Q psy2153 16 DTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKS 90 (325)
Q Consensus 16 dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~T 90 (325)
..|.++.+.. +.+.+|-.||+|.+|+..... ..-.+.....||+++.... ..|..|+.+ .|.+.|.++
T Consensus 165 ~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAIDGIINIFDIATGK-------LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-------EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 4688888863 468888899999998743321 1223332347899988774 356666664 499999988
Q ss_pred Cc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 91 LK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 91 lk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.+ .+..|. ..|.+++.+.+| ..++...+.+|++||..+.++++.+.
T Consensus 238 ~~~~~~~~~h~---~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 287 (321)
T 3ow8_A 238 ANLAGTLSGHA---SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFF 287 (321)
T ss_dssp CCEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cceeEEEcCCC---CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEc
Confidence 73 444444 779999998655 66688889999999999999887763
No 96
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.33 E-value=0.0071 Score=62.23 Aligned_cols=108 Identities=11% Similarity=0.281 Sum_probs=71.9
Q ss_pred eeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEEC-CeEEEEcCCCC--c
Q psy2153 18 ALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-NKIHVVDPKSL--K 92 (325)
Q Consensus 18 Vl~I~~-~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~g-nkI~VIn~~Tl--k 92 (325)
|.+|.. .++++|+|..++-|..|+... +.+. .+....+...|+++..- ++.||+|+. +-++.+|+++. +
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~-~~~~-----~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~ 248 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQ-KTFE-----KVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIK 248 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTT-CCEE-----ECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCC-CeEE-----EecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEE
Confidence 778776 489999999876688887543 2221 11001113568887754 589999984 57999999875 3
Q ss_pred eeEecC-----CCCCceeEEEEe-CCeEEEEEeCCCeEEEEecCccc
Q psy2153 93 SFDAHP-----RRESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 93 sf~~~~-----~~~~~V~~Ma~~-G~GVWiS~~~ss~IrL~ha~T~e 133 (325)
.+.... -....|.+|+.+ ...+|++... -|..||..+.+
T Consensus 249 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~--Gl~~~~~~~~~ 293 (795)
T 4a2l_A 249 NYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN--DLNIYHEGTDS 293 (795)
T ss_dssp EECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS--CEEEEETTTTE
T ss_pred EeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC--hhheEcCCCCe
Confidence 343221 124679999887 4469999865 48888877654
No 97
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.33 E-value=0.0069 Score=55.10 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=90.1
Q ss_pred CCCccceeeCCCceeeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEE
Q psy2153 5 HPTPYPLNKILDTALPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~--~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~ 79 (325)
.-+.++.+..+..|.++.+. .+++|++-. +|+|.+|+.... +....+..+ ..+.++.... +.||+++
T Consensus 63 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~-----~~~~~~~~~---~~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 63 TNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN-----TVAGTVKTG---KSPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-----EEEEEEECS---SSEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC-----eEEEEEeCC---CCcceEEECCCCCEEEEEe
Confidence 44677888889999999987 345776664 599999985432 112334433 3567776653 4687655
Q ss_pred C--CeEEEEcCCCCceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeecchhh
Q psy2153 80 K--NKIHVVDPKSLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 144 (325)
Q Consensus 80 g--nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v 144 (325)
. ++|+++|..+.+...... ....+..++.+.+ .+|++-..+..|++||..+.+.++.+.....+
T Consensus 135 ~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 202 (391)
T 1l0q_A 135 NGDKTVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAP 202 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEE
T ss_pred CCCCEEEEEECCCCcEEEEEe-cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCc
Confidence 4 679999998873322211 1245688888744 48888889999999999999988888765443
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.32 E-value=0.0072 Score=54.99 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=92.0
Q ss_pred CCCccceeeCCCceeeeEEeCC--eEEEE-ecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEE
Q psy2153 5 HPTPYPLNKILDTALPPVHVQG--RVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY 79 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~~~--~VfVg-LANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~ 79 (325)
.-+.++.++....+.++.+..+ ++|++ -.+|+|.+|+... + +..+.+..+. +++++.... +.|+++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~-~----~~~~~~~~~~---~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 21 SNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT-N----NVIATVPAGS---SPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTT-T----EEEEEEECSS---SEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCC-C----eEEEEEECCC---CccceEECCCCCEEEEEE
Confidence 3466778888889999998633 46554 4789999988433 2 1123444443 788887763 5688776
Q ss_pred C--CeEEEEcCCCCceeEecCCCCCceeEEEEeC--CeEEEEEeCCCeEEEEecCccceeeeeecchhh
Q psy2153 80 K--NKIHVVDPKSLKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 144 (325)
Q Consensus 80 g--nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G--~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v 144 (325)
. +.|+++|.++.+...... ....+..++++. ..+|++...+..|++||..+.+.+..+.....+
T Consensus 93 ~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 160 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSP 160 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSE
T ss_pred CCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCc
Confidence 4 679999999884322211 124678888874 458889889999999999999988888765443
No 99
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.31 E-value=0.0099 Score=53.07 Aligned_cols=125 Identities=13% Similarity=0.060 Sum_probs=85.9
Q ss_pred CCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcC
Q psy2153 14 ILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (325)
Q Consensus 14 L~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~ 88 (325)
..+.|.++.+. .+.+++|-.||+|.+|+-.....|.. ...+..+. ..+|+++.... +.+.+|+. +.|.++|.
T Consensus 95 ~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~--~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 95 INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV--CKHIKKPI-RSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEE--EEEECTTC-CSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCccee--eeeeeccc-CCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 45689999986 44788899999999998654432211 11222232 47899988774 46777776 45999995
Q ss_pred C------------------CCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 89 K------------------SLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 89 ~------------------Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
. +.+....-......|++++.+.+| ..++...+..|++||..+.+.++.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred ccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence 3 222222222334789999997665 6667788999999999999998888643
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.31 E-value=0.0064 Score=54.77 Aligned_cols=127 Identities=9% Similarity=0.022 Sum_probs=73.8
Q ss_pred CCCceeeeEEeCC--eEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee---CCEEEEEECCeEEEEcC
Q psy2153 14 ILDTALPPVHVQG--RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKNKIHVVDP 88 (325)
Q Consensus 14 L~dsVl~I~~~~~--~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v---~~~LW~g~gnkI~VIn~ 88 (325)
-.+.|.++.+..+ .++++-.||+|.+|+......-.....+..... ..++...... ..-+.++.++.|.++|.
T Consensus 244 ~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 244 HNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNS--KKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCC--SSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccc--cccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 3468999998643 688889999999999654321000000000111 1222222222 34567778888999999
Q ss_pred CCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 89 KSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 89 ~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
.+.+....-......|++++.+.+| ..++...+..|++||.++.+.+.+++-..
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 376 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT 376 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------
T ss_pred cCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE
Confidence 8884332222234789999998665 55577789999999999999988776554
No 101
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.31 E-value=0.11 Score=51.56 Aligned_cols=118 Identities=19% Similarity=0.250 Sum_probs=83.5
Q ss_pred CceeeeEEeCC---eEEEEecCCcEEEEEcCCCCCCCCCCCe-EEEcCCCCCceeeeeeeC--CEEEEEECCe-EEEEcC
Q psy2153 16 DTALPPVHVQG---RVVCALADGSVAIFRRGPDGQWDLSKYH-TVTLGLPHHSVRSLAAVY--NKVWCGYKNK-IHVVDP 88 (325)
Q Consensus 16 dsVl~I~~~~~---~VfVgLANGtLaVF~R~~~g~WD~~~~~-~I~LG~~~~PV~cml~v~--~~LW~g~gnk-I~VIn~ 88 (325)
+.|.++.+..+ ++..|-.||++.+|+... .+ .-.+.....+|+++.... ..|-.|+.+. |.+.|.
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~--------~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP--------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTT--------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCC--------CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 47889888754 488888999999997322 12 223443357899988774 3455566654 999998
Q ss_pred CCCc---eeEec----CCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 89 KSLK---SFDAH----PRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 89 ~Tlk---sf~~~----~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
.+.+ .|+.. ......|..++.+.+| ..++...+.+|++||..+.+.++.+...
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 7763 33210 0234789999998666 5667888999999999999988887654
No 102
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.30 E-value=0.047 Score=54.75 Aligned_cols=112 Identities=18% Similarity=0.197 Sum_probs=77.1
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcC
Q psy2153 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDP 88 (325)
Q Consensus 15 ~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~ 88 (325)
.+.|+||.+.. +.++.|-.||+|.+|+-..++. ........--|. ..+|+++.... ..|-.|+. +.|.+.|.
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~-~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK-AYGVAQRRLTGH-SHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT-CSCEEEEEEECC-SSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc-ccccccceecCC-CCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 47899999862 3567788899999998654321 111111111233 47899987764 35666665 45999999
Q ss_pred CCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCc
Q psy2153 89 KSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 89 ~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T 131 (325)
.+. +.|..|. ..|++++.+.+| .-++...+.+|++||...
T Consensus 460 ~~~~~~~~~~~h~---~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~ 503 (694)
T 3dm0_A 460 AAGVSTRRFVGHT---KDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 503 (694)
T ss_dssp TTTEEEEEEECCS---SCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred CCCcceeEEeCCC---CCEEEEEEeCCCCEEEEEeCCCEEEEEECCC
Confidence 887 4566666 679999988555 556888999999999654
No 103
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.27 E-value=0.0018 Score=59.92 Aligned_cols=133 Identities=13% Similarity=0.084 Sum_probs=90.8
Q ss_pred CccceeeCCCceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEc---CCCCCceeeeeee-CCEEEEEEC
Q psy2153 7 TPYPLNKILDTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAV-YNKVWCGYK 80 (325)
Q Consensus 7 ~~L~~IkL~dsVl~I~~~-~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~L---G~~~~PV~cml~v-~~~LW~g~g 80 (325)
+.+..+..++.+.++.+. +++++++-. +|+|.+|+...+.. .+.+.. ..+..+|.++..- ++++|+++.
T Consensus 114 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 188 (433)
T 3bws_A 114 RFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQT-----VRLSPPEKYKKKLGFVETISIPEHNELWVSQM 188 (433)
T ss_dssp EEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCE-----EEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG
T ss_pred eEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeE-----eeecCcccccccCCceeEEEEcCCCEEEEEEC
Confidence 567778888888898887 456666554 56799988543211 111111 1234578887764 478887765
Q ss_pred --CeEEEEcCCCCceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCccceeeeeecchhh
Q psy2153 81 --NKIHVVDPKSLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIEPYV 144 (325)
Q Consensus 81 --nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v 144 (325)
+.|.++|.++.+....-......+..++.+.+| ++++-..+..|++||..+.+.++.+.....+
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 256 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLP 256 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEE
T ss_pred CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCc
Confidence 679999998874332222334778999998555 7777778999999999999988887765443
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.26 E-value=0.0099 Score=54.83 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=86.1
Q ss_pred CCccceeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCC-------------------------C-------CCCCCCC
Q psy2153 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPD-------------------------G-------QWDLSKY 53 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~-------------------------g-------~WD~~~~ 53 (325)
-+.+.+++.++.|.++...++.++++. ++++.+|+-... | .||+...
T Consensus 91 ~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 91 KQDVSRIKVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp TEEEEEEECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-
T ss_pred CcEEEEEECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCC
Confidence 356677788889999998888777764 678888875432 2 2666642
Q ss_pred e-----------------EEEcCCCCCceeeeeeeC--CEEEEEECCe--EEEEcCCCCc---eeEecCCCCCceeEEEE
Q psy2153 54 H-----------------TVTLGLPHHSVRSLAAVY--NKVWCGYKNK--IHVVDPKSLK---SFDAHPRRESQVRQMTW 109 (325)
Q Consensus 54 ~-----------------~I~LG~~~~PV~cml~v~--~~LW~g~gnk--I~VIn~~Tlk---sf~~~~~~~~~V~~Ma~ 109 (325)
. ...+.....+|+++.... ..|-.|+.+. |.+.|.++.+ .|... .....|++++.
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g-~h~~~v~~~~~ 248 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG-LDRADVVDMKW 248 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT-TCCSCEEEEEE
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-CCCCcEEEEEE
Confidence 2 223332347899988775 3566666654 9999999873 44421 02378999999
Q ss_pred eCCe-EEEEEeCCCeEEEEecCccc
Q psy2153 110 AGDG-VWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 110 ~G~G-VWiS~~~ss~IrL~ha~T~e 133 (325)
+.+| .-++...+.+|++||..+.+
T Consensus 249 s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 249 STDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCCCEEEEEECCCEEEEEEccCCC
Confidence 9766 44566789999999987753
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.26 E-value=0.019 Score=59.03 Aligned_cols=111 Identities=19% Similarity=0.258 Sum_probs=79.5
Q ss_pred CCceeeeEEe----CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC----CEEEEEECC-eEEE
Q psy2153 15 LDTALPPVHV----QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY----NKVWCGYKN-KIHV 85 (325)
Q Consensus 15 ~dsVl~I~~~----~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~----~~LW~g~gn-kI~V 85 (325)
.++|.++.+. .+.++.|-.||+|.+|+-.. +.|. ....+.....+|+++.... +.+..|+.+ .|.+
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~-~~~~----~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-GRWS----QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET-TEEE----EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC-Cccc----ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 4689999986 56788999999999998543 2111 2233333357999998774 467777774 5999
Q ss_pred EcCCCC---c--eeEecCCCCCceeEEEEeC--------------CeEEEEEeCCCeEEEEecCccc
Q psy2153 86 VDPKSL---K--SFDAHPRRESQVRQMTWAG--------------DGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 86 In~~Tl---k--sf~~~~~~~~~V~~Ma~~G--------------~GVWiS~~~ss~IrL~ha~T~e 133 (325)
.|..+. . .+..| ...|++++... ....++...+.+|++||..+.+
T Consensus 128 wdl~~~~~~~~~~~~~~---~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~ 191 (753)
T 3jro_A 128 VEFKENGTTSPIIIDAH---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (753)
T ss_dssp EECCSSSCCCCEEEECC---SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT
T ss_pred EEeecCCCcceeEeecC---CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc
Confidence 998776 2 23333 37899999876 3567788889999999987753
No 106
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.25 E-value=0.011 Score=52.56 Aligned_cols=130 Identities=12% Similarity=0.053 Sum_probs=88.2
Q ss_pred CCCccceeeCCCceeeeEEeC--CeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCc-------eeeeeee--C
Q psy2153 5 HPTPYPLNKILDTALPPVHVQ--GRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHS-------VRSLAAV--Y 72 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~~--~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~P-------V~cml~v--~ 72 (325)
..+.++.++....+..+.... +++|++-. +|+|.+|+.... +..+.+.++....| ++++... +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 152 (353)
T 3vgz_A 78 TLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTG-----EVKGRLVLDDRKRTEEVRPLQPRELVADDAT 152 (353)
T ss_dssp TCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTC-----CEEEEEESCCCCCCSSCCCCEEEEEEEETTT
T ss_pred CCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCC-----eeEEEEecCCCccccccCCCCCceEEECCCC
Confidence 456778888888888888764 45888766 589999985432 22245666542221 4566554 3
Q ss_pred CEEEEEE---CCeEEEEcCCCCceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 73 NKVWCGY---KNKIHVVDPKSLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 73 ~~LW~g~---gnkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
+.+|++. .++|+++|+++.+....-+.....+..++.+.+ .+|++ ..+..|.+||..+.+.++.+..
T Consensus 153 ~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 153 NTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTT-NADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp TEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEE-CTTSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEE-cCCCeEEEEECCCCeEEEEEEc
Confidence 6799987 466999999998433222222345677777644 36655 4478899999999999998887
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.23 E-value=0.011 Score=55.88 Aligned_cols=113 Identities=12% Similarity=0.027 Sum_probs=78.8
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--C-CEEEEEECCe-EEEEc
Q psy2153 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--Y-NKVWCGYKNK-IHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~-~~LW~g~gnk-I~VIn 87 (325)
.+.|+||.+.. +.|.+|-.||+|.||+-... +....+.+-....+|+||... + +.|..|+.+. |.+.|
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-----~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-----DKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-----SCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-----CceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 35699999963 45778999999999974332 223445543235799999875 3 4666666654 99999
Q ss_pred CCCC--ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcc
Q psy2153 88 PKSL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 88 ~~Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~ 132 (325)
.++. +.+..+......+.+++.+.+| .-++-..+..|++||..+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 8776 4455555555677888887665 4456678999999998754
No 108
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.23 E-value=0.033 Score=48.11 Aligned_cols=104 Identities=11% Similarity=0.140 Sum_probs=69.5
Q ss_pred ceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEE--CCeEEEEcCCCC
Q psy2153 17 TALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKSL 91 (325)
Q Consensus 17 sVl~I~~~-~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~--gnkI~VIn~~Tl 91 (325)
.+..|... ++++|++.. ++.|.+|+. +|.. ..+.+......+..|..- +++||++. .+.|+++++ +.
T Consensus 142 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~--~g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 142 YPSFITLGSDNALWFTENQNNAIGRITE--SGDI-----TEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT--TCCE-----EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCceEEEcCCCCEEEEeCCCCEEEEEcC--CCcE-----EEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 46677665 668999765 578988875 3321 122232222345566554 47899998 578999999 55
Q ss_pred c--eeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEec
Q psy2153 92 K--SFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNA 129 (325)
Q Consensus 92 k--sf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha 129 (325)
+ .+.. +.....+..|+.+.+ .+|++-..+..|..||.
T Consensus 214 ~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 214 EITEFKI-PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CEEEEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred cEEEEEC-CCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 3 3322 224467888888744 59999888889999997
No 109
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.22 E-value=0.0092 Score=53.01 Aligned_cols=128 Identities=12% Similarity=0.091 Sum_probs=87.3
Q ss_pred CCccceee-CCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCC--CCCceeeeeee--CCEEEEE
Q psy2153 6 PTPYPLNK-ILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL--PHHSVRSLAAV--YNKVWCG 78 (325)
Q Consensus 6 ~~~L~~Ik-L~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~--~~~PV~cml~v--~~~LW~g 78 (325)
.+..+.++ ....+.++.+. .+++|++-.+|+|.+|+.... +..+.+.++. +...+..+... ++.||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN-----KILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT-----EEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC-----eEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 44556666 33457788775 457999999999999985332 1223455543 12334455554 4679998
Q ss_pred EC--CeEEEEcCCCCc---eeEecCCCCCceeEEEEe--CCeEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 79 YK--NKIHVVDPKSLK---SFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 79 ~g--nkI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~--G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
+. ++|+++|+++.+ .+.... -..++.+ |..+|++-..+..|.+||..+.+.++.+.....
T Consensus 249 ~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 315 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILAKVAAPE-----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTH 315 (353)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSS-----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSE
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCC-----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCC
Confidence 86 579999998883 334322 1345555 445999999999999999999999999887543
No 110
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.22 E-value=0.086 Score=46.85 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=76.5
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee----CCEEEEEEC-CeEEEEc
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYK-NKIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v----~~~LW~g~g-nkI~VIn 87 (325)
.+.|.++.+. ..+++.|-.||+|.+|+..... . .....+. |. ..||+++... ++.|-.|+. +.|.+.|
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~--~~~~~l~-gH-~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-H--KLIDTLT-GH-EGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-B--CCCEEEC-CC-SSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred cCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-c--EEEEEEc-cc-cCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 3678888875 4578888889999999864321 1 1112222 33 4799999764 345666665 4599999
Q ss_pred CCCC--ceeEecCCCCCceeEEEEeCC---eEEEEEeCCCeEEEEecCccc
Q psy2153 88 PKSL--KSFDAHPRRESQVRQMTWAGD---GVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 88 ~~Tl--ksf~~~~~~~~~V~~Ma~~G~---GVWiS~~~ss~IrL~ha~T~e 133 (325)
.++. +...........|++++.... ..-++...+.+|++||..+.+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 8765 222222223467999999753 367788899999999987753
No 111
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.20 E-value=0.0041 Score=57.84 Aligned_cols=122 Identities=15% Similarity=0.122 Sum_probs=79.5
Q ss_pred ccceee-CCCceeeeEEeC--CeEE-EEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CE-EEEEEC
Q psy2153 8 PYPLNK-ILDTALPPVHVQ--GRVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NK-VWCGYK 80 (325)
Q Consensus 8 ~L~~Ik-L~dsVl~I~~~~--~~Vf-VgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~-LW~g~g 80 (325)
.++.++ -.+.|.++.+.. .++| .|-.||+|.+|+-... +....+........++++.... ++ +-.|+.
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP-----KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS-----SCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc-----ceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 344443 247899999853 2455 4667899999874332 1112222222335677877653 34 455776
Q ss_pred C-eEEEEcCCCC---ceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCccceeee
Q psy2153 81 N-KIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQD 137 (325)
Q Consensus 81 n-kI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~Lqd 137 (325)
+ .|.+.|.++. +.|..|. ..|++++.+.+| +-++...+.+||+||..+.+.++.
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~---~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHS---QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCS---SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEcCCC---CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 5 5999999887 5666666 679999998554 566889999999999999887653
No 112
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.20 E-value=0.08 Score=50.70 Aligned_cols=113 Identities=21% Similarity=0.263 Sum_probs=75.9
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECCe-EEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNK-IHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gnk-I~VIn~~ 89 (325)
.+.|.++.+.. ..++.+-.||+|.+|+.+ ..+...+-....+|+++.... ..|..|+.+. |.+.+..
T Consensus 303 ~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~--------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~ 374 (577)
T 2ymu_A 303 SSSVWGVAFSPDGQTIASASDDKTVKLWNRN--------GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN 374 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETT--------SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEeCC--------CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC
Confidence 45788888763 356667778888888743 223334433457899987764 4677777654 8888854
Q ss_pred CC--ceeEecCCCCCceeEEEEeCCeEEE-EEeCCCeEEEEecCccceeeeee
Q psy2153 90 SL--KSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 90 Tl--ksf~~~~~~~~~V~~Ma~~G~GVWi-S~~~ss~IrL~ha~T~e~LqdId 139 (325)
.. +.+..|. ..|++++.+.+|=++ +...+..|++||. +.+.++.+.
T Consensus 375 ~~~~~~~~~~~---~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~ 423 (577)
T 2ymu_A 375 GQLLQTLTGHS---SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 423 (577)
T ss_dssp CCEEEEEECCS---SCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEE
T ss_pred CCEEEEecCCC---CCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec
Confidence 43 4555554 679999998776444 5567899999995 556665554
No 113
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.13 E-value=0.0081 Score=52.92 Aligned_cols=111 Identities=12% Similarity=0.112 Sum_probs=72.8
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC-EEE-EEECCeEEEEcCCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN-KVW-CGYKNKIHVVDPKS 90 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~-~LW-~g~gnkI~VIn~~T 90 (325)
.++|.+|.+.. +.+++|-.||+|.+|+.... .....+.- ..+|+++....+ .+. ++..+.|.+.|.++
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~-----~~~~~~~~---~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG-----KHLYTLDG---GDIINALCFSPNRYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTT-----EEEEEEEC---SSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC-----ceeeeecC---CceEEeeecCCCCceeeccCCCEEEEEECCC
Confidence 46899998863 46777889999999874321 11122222 257888877754 444 44557799999887
Q ss_pred Cc---eeE------ecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccc
Q psy2153 91 LK---SFD------AHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 91 lk---sf~------~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e 133 (325)
.+ .+. ........|++++.+.+| ..++...+.+|++||.+|.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 287 KIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 62 221 111234789999998666 55677889999999998865
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.12 E-value=0.031 Score=48.35 Aligned_cols=123 Identities=16% Similarity=0.193 Sum_probs=81.2
Q ss_pred CCCceeeeEEe----CCeEEEEecCCcEEEEEcCCCCC-CCCCCC-eEEEcCCCCCceeeeeeeC----CEEEEEECC-e
Q psy2153 14 ILDTALPPVHV----QGRVVCALADGSVAIFRRGPDGQ-WDLSKY-HTVTLGLPHHSVRSLAAVY----NKVWCGYKN-K 82 (325)
Q Consensus 14 L~dsVl~I~~~----~~~VfVgLANGtLaVF~R~~~g~-WD~~~~-~~I~LG~~~~PV~cml~v~----~~LW~g~gn-k 82 (325)
-.++|.++.+. .+.+++|-.||+|.+|+-..... ...... ....+.....+|+++.... +.+.+++.+ .
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~ 135 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGI 135 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCE
T ss_pred CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCc
Confidence 45789999986 45788889999999999654321 111111 2333433358899988774 467777774 5
Q ss_pred EEEEcCCCC---ceeE---------------------------------------------------------ecCCCCC
Q psy2153 83 IHVVDPKSL---KSFD---------------------------------------------------------AHPRRES 102 (325)
Q Consensus 83 I~VIn~~Tl---ksf~---------------------------------------------------------~~~~~~~ 102 (325)
|.+.|.++. +.+. .......
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 215 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS 215 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc
Confidence 999997654 1111 1112346
Q ss_pred ceeEEEEeCCe-----EEEEEeCCCeEEEEecCccceee
Q psy2153 103 QVRQMTWAGDG-----VWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 103 ~V~~Ma~~G~G-----VWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
.|++++....| ..++...+..|++||..+.+...
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 254 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPL 254 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---
T ss_pred ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcc
Confidence 78999998775 77888889999999998765443
No 115
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.12 E-value=0.0046 Score=57.07 Aligned_cols=132 Identities=8% Similarity=0.082 Sum_probs=86.8
Q ss_pred cceeeCCCceeeeEEeCC----eEEEEecCCcEEEEEcCCCC----CCCCCC----------------Ce----------
Q psy2153 9 YPLNKILDTALPPVHVQG----RVVCALADGSVAIFRRGPDG----QWDLSK----------------YH---------- 54 (325)
Q Consensus 9 L~~IkL~dsVl~I~~~~~----~VfVgLANGtLaVF~R~~~g----~WD~~~----------------~~---------- 54 (325)
+.++...+.|.+|.+..+ .+++|-.||+|.+|+-.... .+.+.. +.
T Consensus 87 ~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (447)
T 3dw8_B 87 LKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEA 166 (447)
T ss_dssp GGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEE
T ss_pred cccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeec
Confidence 444455588999999754 69999999999999853211 011111 00
Q ss_pred ----EEEcCCCCCceeeeeeeC--CEEEEEECCeEEEEcCCCC-ceeE---ec----CCCCCceeEEEEeCCe--EEEEE
Q psy2153 55 ----TVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSL-KSFD---AH----PRRESQVRQMTWAGDG--VWVSI 118 (325)
Q Consensus 55 ----~I~LG~~~~PV~cml~v~--~~LW~g~gnkI~VIn~~Tl-ksf~---~~----~~~~~~V~~Ma~~G~G--VWiS~ 118 (325)
.+.-| ...+|+++.... ..|-.|..+.|.+.|.++. +.+. .. ......|++++.+..| ..++.
T Consensus 167 ~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 167 SPRRIFANA-HTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp EEEEEECSC-CSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred cceEEeccC-CCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 11123 247899987764 3555564466999999854 3332 11 1234779999999775 78888
Q ss_pred eCCCeEEEEecCccce----eeeeecc
Q psy2153 119 RLDSTLRMYNAHTYQH----LQDVDIE 141 (325)
Q Consensus 119 ~~ss~IrL~ha~T~e~----LqdIdIa 141 (325)
..+.+|++||..+.+. ++.+.-.
T Consensus 246 ~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp ETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred eCCCeEEEEECcCCccccceeeEeccC
Confidence 8999999999999886 5555543
No 116
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.04 E-value=0.056 Score=47.47 Aligned_cols=117 Identities=8% Similarity=0.050 Sum_probs=80.1
Q ss_pred CceeeeEEeC---C-eEEEEecCCcEEEEEcCCCCCCCCCCCeE-EEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEc
Q psy2153 16 DTALPPVHVQ---G-RVVCALADGSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVD 87 (325)
Q Consensus 16 dsVl~I~~~~---~-~VfVgLANGtLaVF~R~~~g~WD~~~~~~-I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn 87 (325)
+.|.++.+.. + .++.+-.||+|.+|+... .+. -.+-....+|+++.... ..|..|+. +.|.+.|
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~--------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd 243 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN--------CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 243 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTT--------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCC--------CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4666766642 2 344566788888887432 222 22222247899987764 45666776 4599999
Q ss_pred CCCCceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 88 PKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 88 ~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
..+.+...... ....|+.++....+.+++...+..|++||.++.+.++++.-.
T Consensus 244 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 244 LNEGKHLYTLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC
T ss_pred eccCceeeeec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEecccc
Confidence 99884332211 235789999998888999999999999999999888877644
No 117
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.99 E-value=0.11 Score=44.91 Aligned_cols=112 Identities=11% Similarity=0.220 Sum_probs=73.6
Q ss_pred ceeeCC---CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEE--CC
Q psy2153 10 PLNKIL---DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KN 81 (325)
Q Consensus 10 ~~IkL~---dsVl~I~~~-~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~--gn 81 (325)
..+.++ ..+.+|... ++++|++.. +|.|.+|+.+ |.+ ..+.+......+..|..- +++||++. .+
T Consensus 53 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~--g~~-----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 125 (300)
T 2qc5_A 53 KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK--GGF-----TEYPLPQPDSGPYGITEGLNGDIWFTQLNGD 125 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-----EEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC--CCe-----EEecCCCCCCCCccceECCCCCEEEEccCCC
Confidence 334454 457777664 578999987 6789999754 332 223332222345666554 57999988 46
Q ss_pred eEEEEcCCCC-ceeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEec
Q psy2153 82 KIHVVDPKSL-KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNA 129 (325)
Q Consensus 82 kI~VIn~~Tl-ksf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha 129 (325)
.|+.++++.. ..+.. +.....+..|+...+ .+|++-..+..|..||.
T Consensus 126 ~i~~~~~~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 126 RIGKLTADGTIYEYDL-PNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EEEEECTTSCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred eEEEECCCCCEEEccC-CCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 8999998722 33332 224567888888644 39999988888999987
No 118
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.97 E-value=0.021 Score=57.37 Aligned_cols=121 Identities=15% Similarity=0.162 Sum_probs=86.2
Q ss_pred CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee----CCEEEEEECC-eEEEE
Q psy2153 15 LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYKN-KIHVV 86 (325)
Q Consensus 15 ~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v----~~~LW~g~gn-kI~VI 86 (325)
+..|.++.+.. +.++++-.||+|.+|+-... .....+..+. ..+|+++... +..|.+|+.+ .|.+.
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~-----~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----TPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS-----SCSEEEECCC-TTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----cceeEEecCC-CCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 46799999975 47888899999999985332 2223444332 3678888775 3456666664 59999
Q ss_pred cCCCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 87 DPKSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 87 n~~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
|..+.+...........|++++++.+| .-++...+..|++||..+.+.++.+...
T Consensus 214 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 214 DYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 998874332222234789999998776 5667778999999999999998887654
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.96 E-value=0.014 Score=54.94 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=85.6
Q ss_pred CCccceeeC-CCceeeeEEeCC---eEEEEecCCcEEEEEcCCCCC--CCCCCCeEEEcCCCCCceeeeeeeC--C-EEE
Q psy2153 6 PTPYPLNKI-LDTALPPVHVQG---RVVCALADGSVAIFRRGPDGQ--WDLSKYHTVTLGLPHHSVRSLAAVY--N-KVW 76 (325)
Q Consensus 6 ~~~L~~IkL-~dsVl~I~~~~~---~VfVgLANGtLaVF~R~~~g~--WD~~~~~~I~LG~~~~PV~cml~v~--~-~LW 76 (325)
.+++..++- .+.|.+|.+..+ .+++|-.+|+|.+|+....+. +.+.....+. + ...+|.++.... + .+.
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~-h~~~v~~v~~~p~~~~~l~ 248 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFT-G-HTAVVEDVAWHLLHESLFG 248 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEEC-C-CSSCEEEEEECSSCTTEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeec-C-CCCCEeeeEEeCCCCCEEE
Confidence 345555443 458899998643 788899999999999765321 2222222222 3 237899988763 3 444
Q ss_pred EEEC-CeEEEEcCCCC---c---eeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCcc-ceeeee
Q psy2153 77 CGYK-NKIHVVDPKSL---K---SFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTY-QHLQDV 138 (325)
Q Consensus 77 ~g~g-nkI~VIn~~Tl---k---sf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~-e~LqdI 138 (325)
+++. ++|.+.|.++. + .+..| ...|++|+....+ +.++...+.+|++||..+. +.+..+
T Consensus 249 s~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNNTSKPSHTVDAH---TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp EEETTSEEEEEETTCSCSSSCSEEEECC---SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred EEeCCCeEEEEECCCCCCCcceeEeecC---CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 5554 56999998875 2 33444 3779999998554 7889999999999999884 334443
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.022 Score=53.80 Aligned_cols=122 Identities=13% Similarity=0.006 Sum_probs=82.8
Q ss_pred CCceeeeEEeCC-----eEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEECC-eEEEEc
Q psy2153 15 LDTALPPVHVQG-----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKN-KIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~~~-----~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~gn-kI~VIn 87 (325)
.+.|.++.+..+ .++.|-.||+|.+|+-.... ....+..|. ..+|+++... ++.|..|+.+ .|.+.|
T Consensus 195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~h-~~~v~~~~~sd~~~l~s~~~d~~v~vwd 268 (450)
T 2vdu_B 195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-----IVDKWLFGH-KHFVSSICCGKDYLLLSAGGDDKIFAWD 268 (450)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-----CEEEECCCC-SSCEEEEEECSTTEEEEEESSSEEEEEE
T ss_pred cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-----eeeeeecCC-CCceEEEEECCCCEEEEEeCCCeEEEEE
Confidence 468999998765 78888899999999853321 112222243 4789998876 3466666664 699999
Q ss_pred CCCC---ceeEecC----------------------CCCCceeEEEEeC--CeEEEEEeCCCeEEEEec--Ccc---cee
Q psy2153 88 PKSL---KSFDAHP----------------------RRESQVRQMTWAG--DGVWVSIRLDSTLRMYNA--HTY---QHL 135 (325)
Q Consensus 88 ~~Tl---ksf~~~~----------------------~~~~~V~~Ma~~G--~GVWiS~~~ss~IrL~ha--~T~---e~L 135 (325)
..+. +.+..+. .....|..++... ..+.++...+..|++|+. .+. +.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~ 348 (450)
T 2vdu_B 269 WKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALK 348 (450)
T ss_dssp TTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEE
T ss_pred CCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeec
Confidence 9887 3444331 2346788888874 446655558999999999 444 677
Q ss_pred eeeecch
Q psy2153 136 QDVDIEP 142 (325)
Q Consensus 136 qdIdIa~ 142 (325)
+.+....
T Consensus 349 ~~~~~~~ 355 (450)
T 2vdu_B 349 QIITFPY 355 (450)
T ss_dssp EEEECSS
T ss_pred cEeccCC
Confidence 7666543
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.85 E-value=0.027 Score=51.93 Aligned_cols=128 Identities=9% Similarity=0.049 Sum_probs=85.2
Q ss_pred CccceeeC-CCceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE-
Q psy2153 7 TPYPLNKI-LDTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY- 79 (325)
Q Consensus 7 ~~L~~IkL-~dsVl~I~~~~--~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~- 79 (325)
+.++.++. ...+.++.+.. +++|++- .+|+|.+|+..... ....+.. ...+.++... ++.||+++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~---~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-----EIRKTDK---IGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-----EEEECCC---CSEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-----EEEEecC---CCCceEEEEcCCCCEEEEEEC
Confidence 45555554 34788888873 4576665 68999998854321 1112222 2457777665 35789887
Q ss_pred --------CCeEEEEcCCCCceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 80 --------KNKIHVVDPKSLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 80 --------gnkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
.++|+++|..+.+....-. ....+..++.+.+ .+|++...+..|++||..+.+.++.+.....
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~ 346 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDK 346 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSS
T ss_pred CCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCC
Confidence 3479999998874332211 1236778888754 4999999999999999999999888875443
No 122
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.84 E-value=0.018 Score=53.17 Aligned_cols=116 Identities=15% Similarity=0.144 Sum_probs=79.7
Q ss_pred eeeeEEeCCeEEE---EecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC---CEEEEEECC-eEEEEcCCC
Q psy2153 18 ALPPVHVQGRVVC---ALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---NKVWCGYKN-KIHVVDPKS 90 (325)
Q Consensus 18 Vl~I~~~~~~VfV---gLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~---~~LW~g~gn-kI~VIn~~T 90 (325)
..++....+...+ |-.+|+|.||+-+..|... ..... +.....+|+++.... +.|..|+.+ .|.+.+..+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-~~~~~--~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-KNVPL--VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-TTCCC--BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-CCCce--EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 3345555544333 4668999999965544321 11111 222247999998863 467777765 599999876
Q ss_pred C----------ceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 91 L----------KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 91 l----------ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
. +.+..|. ..|+++++...| +.++...+.+|++||..+.+.++.+.
T Consensus 114 ~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 171 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHT---KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG 171 (402)
T ss_dssp TCCSSCBCSCSEEEECCS---SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCccccCCceEEecCCC---CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe
Confidence 5 2344444 789999998775 88899999999999999999988883
No 123
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.81 E-value=0.016 Score=53.84 Aligned_cols=129 Identities=10% Similarity=-0.003 Sum_probs=81.7
Q ss_pred CCCccceeeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC-C-EEEEEECC
Q psy2153 5 HPTPYPLNKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-N-KVWCGYKN 81 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~-~-~LW~g~gn 81 (325)
..+.+..++-...|.++.+. +++.+++..++.+.++....+. ............+|+++.... + .+..++.+
T Consensus 166 ~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d 240 (365)
T 4h5i_A 166 DLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGS-----CIARKTDFDKNWSLSKINFIADDTVLIAASLK 240 (365)
T ss_dssp TTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCC-----EEEEECCCCTTEEEEEEEEEETTEEEEEEEES
T ss_pred CCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCc-----ceeeeecCCCCCCEEEEEEcCCCCEEEEEecC
Confidence 34556667777889999986 5677787788888888643321 101112222346788877664 3 34444433
Q ss_pred -----eEEEEcCCCCc--eeEe--cCCCCCceeEEEEeCCeEEEE-EeCCCeEEEEecCccceeeee
Q psy2153 82 -----KIHVVDPKSLK--SFDA--HPRRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 82 -----kI~VIn~~Tlk--sf~~--~~~~~~~V~~Ma~~G~GVWiS-~~~ss~IrL~ha~T~e~LqdI 138 (325)
.+...+....+ .... -......|++|+.+.+|=+++ -..+.+|++||.+|.+.++.+
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 35666665541 1111 112346799999998885555 567899999999999988765
No 124
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.064 Score=48.56 Aligned_cols=125 Identities=9% Similarity=0.132 Sum_probs=75.6
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
.++|.++.+.. +.+..|-.||+|.+|+......-..+....-.+.....+|+++.... ..|-.|+.+ .|.+.|..
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 45899999863 45777888999999985432110011111222322347899988764 356666665 49999984
Q ss_pred CC----ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcc--ceeeeee
Q psy2153 90 SL----KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTY--QHLQDVD 139 (325)
Q Consensus 90 Tl----ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~--e~LqdId 139 (325)
+. +...........|++++.+.++ .-++...+.+||+||..+. +.++.+.
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~ 194 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN 194 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc
Confidence 32 2222222233779999987554 6778889999999998765 4555443
No 125
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.083 Score=47.83 Aligned_cols=120 Identities=13% Similarity=0.193 Sum_probs=78.7
Q ss_pred CCCccceeeCC-CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC
Q psy2153 5 HPTPYPLNKIL-DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN 81 (325)
Q Consensus 5 ~~~~L~~IkL~-dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn 81 (325)
..+.++.++-. ++|.++.+..+.+..|-.||+|.+|+-..+. + .....+..+....+|+++.... ..|-.|+.+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~-~--~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDD-F--TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSC-C--EEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ccccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCC-e--EEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 44556666543 6899999999888889999999999854321 1 1112232342357899987764 456666665
Q ss_pred -eEEEEcCCCC----------ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecC
Q psy2153 82 -KIHVVDPKSL----------KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAH 130 (325)
Q Consensus 82 -kI~VIn~~Tl----------ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~ 130 (325)
.|.+.+.++. +.+..|. ..|++++.+.+| .-++...+.+|++||..
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~---~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHE---NEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC-------CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCC---CcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 4999987432 2334444 779999998666 55677889999999983
No 126
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.68 E-value=0.065 Score=56.97 Aligned_cols=115 Identities=14% Similarity=0.179 Sum_probs=84.0
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCC
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~ 89 (325)
.++|+|+.+.. ..+..|-.||+|.||+-.... ....+-....+|+++.... +.|-.|+. +.|.|.|..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGE-------KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC-------EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 37899999864 367778899999999854321 2333333347899988874 35666666 469999999
Q ss_pred CC---ceeEecCCCCCceeEEEEeC--Ce-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 90 SL---KSFDAHPRRESQVRQMTWAG--DG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 90 Tl---ksf~~~~~~~~~V~~Ma~~G--~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+. +.|..|. ..|++++.+. .+ +.++...+.+|++||..+.+.+..+.
T Consensus 688 ~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 688 TGKLVHTYDEHS---EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp TCCEEEEEECCS---SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred CCceEEEEcCCC---CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence 88 3455544 7899999875 33 66678889999999999998877654
No 127
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.035 Score=55.38 Aligned_cols=120 Identities=14% Similarity=0.186 Sum_probs=82.4
Q ss_pred CCceeeeEEeCC--------eEEEEecCCcEEEEEcCCCCCC-----CCCCCeEEEcCCCCCceeeeeeeC-CEEEEEEC
Q psy2153 15 LDTALPPVHVQG--------RVVCALADGSVAIFRRGPDGQW-----DLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGYK 80 (325)
Q Consensus 15 ~dsVl~I~~~~~--------~VfVgLANGtLaVF~R~~~g~W-----D~~~~~~I~LG~~~~PV~cml~v~-~~LW~g~g 80 (325)
.+.|.++.+... .+..|-.||+|.+|+-.....- ....+. ..+.....+|+|+.... +.|..|+.
T Consensus 207 ~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~-~~l~~h~~~v~sv~~s~~~~lasgs~ 285 (524)
T 2j04_B 207 FGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPS-LTLSLADSLITTFDFLSPTTVVCGFK 285 (524)
T ss_dssp CCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCS-EEECCTTTCEEEEEESSSSEEEEEET
T ss_pred CCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCce-EEEEcCCCCEEEEEecCCCeEEEEeC
Confidence 367888888753 4555888999999996543210 112221 12322347899988654 57888888
Q ss_pred C-eEEEEcCCCC----ceeEecCCCCCceeEEE--EeCCe--EEEEEeCCCeEEEEecCccceeeee
Q psy2153 81 N-KIHVVDPKSL----KSFDAHPRRESQVRQMT--WAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 81 n-kI~VIn~~Tl----ksf~~~~~~~~~V~~Ma--~~G~G--VWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
+ .|.+.|.++. +.+..|. ..|+.++ ....| +-+|.+.+.+|||||..+.++++.+
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~---~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHD---SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSS---SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred CCEEEEEECCCCCCceEEeeccc---ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence 5 4999998764 3466666 6799884 45544 7889999999999999988765543
No 128
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.66 E-value=0.024 Score=52.18 Aligned_cols=126 Identities=9% Similarity=0.124 Sum_probs=82.1
Q ss_pred CCceeeeEEe-CC-eEEEEecCCcEEEEEcCCCCCCCCCCCeEE-----EcCCCCCceeeeeeeC---CEEEEEECCe-E
Q psy2153 15 LDTALPPVHV-QG-RVVCALADGSVAIFRRGPDGQWDLSKYHTV-----TLGLPHHSVRSLAAVY---NKVWCGYKNK-I 83 (325)
Q Consensus 15 ~dsVl~I~~~-~~-~VfVgLANGtLaVF~R~~~g~WD~~~~~~I-----~LG~~~~PV~cml~v~---~~LW~g~gnk-I 83 (325)
.+.|.++.+. ++ .++.| .||+|.+|+-...+. ....+ .+.....+|+++.... ..|..|+.+. |
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-DDLRINLWHLEITDR----SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE----EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc----eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 4689999886 33 45555 899999998542210 11111 1222346899988775 3577777654 9
Q ss_pred EEEcCCCCc-------eeEecCCC---------CCceeEEEEeCCeEEEEEeCCCeEEEEecCc-cceeeeeecchhhh
Q psy2153 84 HVVDPKSLK-------SFDAHPRR---------ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHLQDVDIEPYVS 145 (325)
Q Consensus 84 ~VIn~~Tlk-------sf~~~~~~---------~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T-~e~LqdIdIa~~v~ 145 (325)
.+.|.++.+ .|+.|.+. ...|++++.+.+|-+++......|++||..+ .+.++.+.....+.
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccc
Confidence 999988763 33433321 0289999999887555555559999999998 88888887665433
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.66 E-value=0.022 Score=50.46 Aligned_cols=129 Identities=12% Similarity=0.097 Sum_probs=86.4
Q ss_pred CCccceeeCCCceeeeEEeCC--eEEEEec-CCc-EEEEEcCCCCC-CCCCCCeEEEcCCCCCceeeeeeeC--CEEEEE
Q psy2153 6 PTPYPLNKILDTALPPVHVQG--RVVCALA-DGS-VAIFRRGPDGQ-WDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCG 78 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~~--~VfVgLA-NGt-LaVF~R~~~g~-WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g 78 (325)
.+.++.++....+.++.+..+ ++|++-. ++. |.+|+-+.+|. .+.. .+.+..|. . .+++..-. ..+|++
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~--~-~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISGGT--R-PFNITFTPDGNFAFVA 193 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECSSS--S-EEEEEECTTSSEEEEE
T ss_pred CCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccCCC--C-ccceEECCCCCEEEEE
Confidence 455667777778888888644 5887754 478 99999776553 2332 33444443 3 45655553 359998
Q ss_pred EC--CeEEEEcCCCCce---eEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccce--eeeee
Q psy2153 79 YK--NKIHVVDPKSLKS---FDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQH--LQDVD 139 (325)
Q Consensus 79 ~g--nkI~VIn~~Tlks---f~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~--LqdId 139 (325)
+. ++|.+++.++.+. ...-+ ....+..|+.+.+ .+|++...+..|.+||.++.+. ++.+.
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~ 262 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG 262 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred eCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence 84 6799999988753 32222 2366778888744 4788877888899999999876 44433
No 130
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.64 E-value=0.11 Score=44.82 Aligned_cols=109 Identities=13% Similarity=0.216 Sum_probs=73.4
Q ss_pred CceeeeEE-eCCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEE--CCeEEEEcCCC
Q psy2153 16 DTALPPVH-VQGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS 90 (325)
Q Consensus 16 dsVl~I~~-~~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~--gnkI~VIn~~T 90 (325)
..+.+|.. .++++|++.. +|.|..|+.+ |. .+.+.+.....-+..|..- +++||++. ++.|+++++ +
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~-----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK--GI-----IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT--SC-----EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC--Cc-----EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence 46777776 4678999976 6789888743 32 1334432222345666555 47999987 468999998 4
Q ss_pred C--ceeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEecCccce
Q psy2153 91 L--KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 91 l--ksf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha~T~e~ 134 (325)
. +.+.. +.....+..|+.+.+ .+|++-..+..|..||. +.+.
T Consensus 129 g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 129 GKIREYEL-PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp CCEEEEEC-SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CCEEEecC-CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 3 33322 224467888988854 59999888899999998 5544
No 131
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.62 E-value=0.042 Score=49.83 Aligned_cols=116 Identities=16% Similarity=0.131 Sum_probs=79.7
Q ss_pred CCceeeeEEeC------------CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC
Q psy2153 15 LDTALPPVHVQ------------GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK 80 (325)
Q Consensus 15 ~dsVl~I~~~~------------~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g 80 (325)
.+.|.|+.+.. ..+..+-.||+|.+|+.+. + ....+-....+|+++.... ..|-.|+.
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------~--~~~~~~~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF------Q--IRYTFKAHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT------E--EEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC------c--eeEEEcCccccceEEEECCCCCEEEEEcC
Confidence 35688888864 4578888899999998321 1 1222222247899987764 35666776
Q ss_pred C-eEEEEcCCCC-ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 81 N-KIHVVDPKSL-KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 81 n-kI~VIn~~Tl-ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+ .|.+.|..+. +..... .....|++++.+.++-|++...+..|++||..+.+.+....
T Consensus 234 dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~ 293 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCT 293 (343)
T ss_dssp TCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEE
T ss_pred CCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEE
Confidence 4 5999998554 211111 12356999999999999999999999999999888766333
No 132
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.59 E-value=0.091 Score=46.70 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=76.7
Q ss_pred CCceeeeEEeC----CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC---------------CEE
Q psy2153 15 LDTALPPVHVQ----GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY---------------NKV 75 (325)
Q Consensus 15 ~dsVl~I~~~~----~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~---------------~~L 75 (325)
.+.|.++.+.. ..+.+|-.||+|.+|+-...+.+. ...+. +. ..+|+++.... ..|
T Consensus 99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~---~~~~~-~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS---PIIID-AH-AIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC---CEEEE-CC-SSCEEEEEECCCC------------CCEE
T ss_pred CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee---eeeee-cc-cCccceEeecCCcccccccCCCCCCcceE
Confidence 36899999864 468889999999999865433221 12222 32 36787776543 367
Q ss_pred EEEECC-eEEEEcCCCC-------ceeEecCCCCCceeEEEEeCC----eEEEEEeCCCeEEEEecCcc
Q psy2153 76 WCGYKN-KIHVVDPKSL-------KSFDAHPRRESQVRQMTWAGD----GVWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 76 W~g~gn-kI~VIn~~Tl-------ksf~~~~~~~~~V~~Ma~~G~----GVWiS~~~ss~IrL~ha~T~ 132 (325)
..|+.+ .|.+.|.++. +.|..|. ..|+.++.+.. ...++...+.+|++||..+.
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~---~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHS---DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCS---SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCC---CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 777775 4999987654 2344444 67999999865 47778899999999998764
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.57 E-value=0.045 Score=54.49 Aligned_cols=130 Identities=10% Similarity=0.097 Sum_probs=91.5
Q ss_pred CCccceeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee------CCEEEE
Q psy2153 6 PTPYPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV------YNKVWC 77 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v------~~~LW~ 77 (325)
.+.++.++....+.++.+. ..++|++-.+|+|.+|+-.... .+....+..|. .| +.+..- +..||+
T Consensus 169 ~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t---~~~~~~i~~g~--~p-~~va~sp~~~~dg~~l~v 242 (543)
T 1nir_A 169 KKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE---PTKVAEIKIGI--EA-RSVESSKFKGYEDRYTIA 242 (543)
T ss_dssp CCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSS---CEEEEEEECCS--EE-EEEEECCSTTCTTTEEEE
T ss_pred ceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCC---CcEEEEEecCC--Cc-ceEEeCCCcCCCCCEEEE
Confidence 4567778877778888775 3479999999999999852110 12235577665 34 666655 347999
Q ss_pred EE--CCeEEEEcCCCC---ceeEecCC--------CCCceeEEEEe--CCeEEEEEeCCCeEEEEecCccceee--eeec
Q psy2153 78 GY--KNKIHVVDPKSL---KSFDAHPR--------RESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQHLQ--DVDI 140 (325)
Q Consensus 78 g~--gnkI~VIn~~Tl---ksf~~~~~--------~~~~V~~Ma~~--G~GVWiS~~~ss~IrL~ha~T~e~Lq--dIdI 140 (325)
++ .+.|.|+|..|+ +.+..+.. .+..+..++.+ +..++++.+.+..|.+||..+.+.++ .++.
T Consensus 243 ~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 243 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC
T ss_pred EEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc
Confidence 88 488999999998 34444221 23467888877 45588899999999999999987766 5554
Q ss_pred c
Q psy2153 141 E 141 (325)
Q Consensus 141 a 141 (325)
.
T Consensus 323 ~ 323 (543)
T 1nir_A 323 A 323 (543)
T ss_dssp C
T ss_pred C
Confidence 3
No 134
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.55 E-value=0.16 Score=47.39 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=86.7
Q ss_pred CCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC-CeEEEEcCCCC
Q psy2153 15 LDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK-NKIHVVDPKSL 91 (325)
Q Consensus 15 ~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g-nkI~VIn~~Tl 91 (325)
.+.|.++.+....+..|-.+|++.+++.... ......+.....++.++.... ..+..++. +.|.+.+..+.
T Consensus 189 ~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~------~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 189 SARVGSLSWNSYILSSGSRSGHIHHHDVRVA------EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp SSCEEEEEEETTEEEEEETTSEEEEEETTSS------SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred CCceEEEeeCCCEEEEEeCCCceeEeeeccc------ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 3578899998989999999999999984332 112223322236676665553 56666666 55999998776
Q ss_pred c----eeEecCCCCCceeEEEEeC--CeEEEEE--eCCCeEEEEecCccceeeeeecchhhhhhc
Q psy2153 92 K----SFDAHPRRESQVRQMTWAG--DGVWVSI--RLDSTLRMYNAHTYQHLQDVDIEPYVSKML 148 (325)
Q Consensus 92 k----sf~~~~~~~~~V~~Ma~~G--~GVWiS~--~~ss~IrL~ha~T~e~LqdIdIa~~v~~~l 148 (325)
+ .+.........|..++... ..+-.+. +.+.+|++||..+.+.+..++....+..+.
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~ 327 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSIL 327 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeee
Confidence 2 2233344457888888863 2343332 467899999999999999999877665554
No 135
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.55 E-value=0.25 Score=45.62 Aligned_cols=135 Identities=13% Similarity=0.185 Sum_probs=81.0
Q ss_pred eeeCCCceeeeEEe-CCeEEEEecC-----C---cEEEEEcCCCCCC---CCCCCeEEEcCCCCCceeeeeeeCCEEEEE
Q psy2153 11 LNKILDTALPPVHV-QGRVVCALAD-----G---SVAIFRRGPDGQW---DLSKYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (325)
Q Consensus 11 ~IkL~dsVl~I~~~-~~~VfVgLAN-----G---tLaVF~R~~~g~W---D~~~~~~I~LG~~~~PV~cml~v~~~LW~g 78 (325)
+.++.-+|.|+.+. +++++|+=.. | +|.+|+-+....- .+.....+.|..-...|+|+..-++.+.+|
T Consensus 10 ~~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g 89 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVG 89 (365)
T ss_dssp EEECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEE
T ss_pred ecCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEE
Confidence 45677789999986 5677766332 2 4888875433210 111122345543335678887777777776
Q ss_pred EC-----------Ce-EEEEc--CCCC--c-----eeEecCCCCCceeEEEEeCCeEEEE--E-eCCCeEEEEecCccce
Q psy2153 79 YK-----------NK-IHVVD--PKSL--K-----SFDAHPRRESQVRQMTWAGDGVWVS--I-RLDSTLRMYNAHTYQH 134 (325)
Q Consensus 79 ~g-----------nk-I~VIn--~~Tl--k-----sf~~~~~~~~~V~~Ma~~G~GVWiS--~-~~ss~IrL~ha~T~e~ 134 (325)
+. |+ +.+++ .... + ++....+.+..++.++.+.+|=+++ - ..+.+||+||.++.+.
T Consensus 90 ~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 90 CNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred ECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 52 22 44444 3322 1 1222334456688888887774443 2 3578999999999999
Q ss_pred eeeeecchhhh
Q psy2153 135 LQDVDIEPYVS 145 (325)
Q Consensus 135 LqdIdIa~~v~ 145 (325)
+.+++-...|.
T Consensus 170 ~~~~~~~~~V~ 180 (365)
T 4h5i_A 170 KFEIETRGEVK 180 (365)
T ss_dssp EEEEECSSCCC
T ss_pred EEEeCCCCceE
Confidence 99887555443
No 136
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.54 E-value=0.034 Score=47.84 Aligned_cols=113 Identities=12% Similarity=0.013 Sum_probs=74.8
Q ss_pred ceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC-CEEEEEE--CCeEEEEcCCCC
Q psy2153 17 TALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY-NKVWCGY--KNKIHVVDPKSL 91 (325)
Q Consensus 17 sVl~I~~~-~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~-~~LW~g~--gnkI~VIn~~Tl 91 (325)
.+.+|... ++++||+-. ++.|.+|+.+....+ ....+.- .....+..-. +.||++. .++|+++++.+.
T Consensus 151 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~------~~~~~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 151 DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV------VLPFTDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE------ECCCSSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CceeEEEeCCCCEEEEECCCCEEEEEecCCCceE------eecccCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 45667665 578999875 678999975432111 1111111 2345555543 5999998 467999999876
Q ss_pred ceeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEecCccceee
Q psy2153 92 KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 92 ksf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
............+..|+.+.+ .+|++-..+..|++|+....+++.
T Consensus 224 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 224 TSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHH 269 (270)
T ss_dssp CCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCC
T ss_pred cceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccccC
Confidence 332222223367888988754 499999999999999999888764
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.51 E-value=0.037 Score=48.55 Aligned_cols=134 Identities=13% Similarity=0.106 Sum_probs=82.3
Q ss_pred ccceeeCCCceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEE--C
Q psy2153 8 PYPLNKILDTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY--K 80 (325)
Q Consensus 8 ~L~~IkL~dsVl~I~~~~--~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~--g 80 (325)
.+..+.....+.++.+.. +++|++- .+|+|.+|+...++.........+.... ...++++..-. +.||+++ .
T Consensus 121 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 121 VVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp EEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTTSSEEEEEETTT
T ss_pred ccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCCCCEEEEEeCCC
Confidence 344455566788888764 3688877 8999999997654432100000222221 23566665553 4588876 3
Q ss_pred CeEEEEcCCC--C-----ceeEecC---CCCCceeEEEEeCC--eEEEEEeCCCeEEEEecC----ccceeeeeecch
Q psy2153 81 NKIHVVDPKS--L-----KSFDAHP---RRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH----TYQHLQDVDIEP 142 (325)
Q Consensus 81 nkI~VIn~~T--l-----ksf~~~~---~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~----T~e~LqdIdIa~ 142 (325)
++|.+++... . +.+...+ .....+..++.+.+ .+|++.+.+..|++||.. +.+.+..+....
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET 277 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC
Confidence 6799999854 2 1222111 12346677888855 488888889999999998 566666665543
No 138
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.50 E-value=0.036 Score=51.00 Aligned_cols=109 Identities=12% Similarity=0.130 Sum_probs=68.8
Q ss_pred EeCCeE-EEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCeEEEEcCCCC-c---e----
Q psy2153 23 HVQGRV-VCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSL-K---S---- 93 (325)
Q Consensus 23 ~~~~~V-fVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnkI~VIn~~Tl-k---s---- 93 (325)
+..+.+ ++|-.+|+|.+|+-..+. ....+.. ..+|+++..-.+.+.++..++|++.|..+. + .
T Consensus 68 ~~~~~~~~~~~~d~~v~iWd~~~~~-----~~~~~~~---~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 139 (355)
T 3vu4_A 68 HRTNYVAFVTGVKEVVHIWDDVKKQ-----DVSRIKV---DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRF 139 (355)
T ss_dssp TTSSEEEEECSSTTEEEEEETTTTE-----EEEEEEC---SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEE
T ss_pred CCCCEEEEEECCccEEEEEECCCCc-----EEEEEEC---CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccC
Confidence 334444 456667788887743211 1122332 257888877777777777777777765543 1 0
Q ss_pred ------------------------e------------------------EecCCCCCceeEEEEeCCe-EEEEEeCCCe-
Q psy2153 94 ------------------------F------------------------DAHPRRESQVRQMTWAGDG-VWVSIRLDST- 123 (325)
Q Consensus 94 ------------------------f------------------------~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~- 123 (325)
+ ..-......|++++.+.+| .-++...+.+
T Consensus 140 ~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 140 GGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred CceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 0 0011123678999998776 4456778887
Q ss_pred EEEEecCccceeeeee
Q psy2153 124 LRMYNAHTYQHLQDVD 139 (325)
Q Consensus 124 IrL~ha~T~e~LqdId 139 (325)
|++||..+.+.++.+.
T Consensus 220 v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFR 235 (355)
T ss_dssp EEEEETTTCCEEEEEE
T ss_pred EEEEECCCCcEEEEEE
Confidence 9999999999998876
No 139
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.48 E-value=0.021 Score=53.77 Aligned_cols=115 Identities=9% Similarity=0.043 Sum_probs=78.6
Q ss_pred CCceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCC-CCCceeeeeeeC--CEEEEEECC-eEEEEc
Q psy2153 15 LDTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVY--NKVWCGYKN-KIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~---~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~-~~~PV~cml~v~--~~LW~g~gn-kI~VIn 87 (325)
.++|+||.+. .+.++.|-.||+|.+|+-.. .....+.-+. ...++.++.... ..|.+|+.+ .|++.|
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd 237 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG------NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLN 237 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETTS------CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC------CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence 4689999986 34677788899999987422 1112222222 224566766553 466777764 499999
Q ss_pred CCCC--ceeEecCCCCCceeEEEEeC--CeEEEEEeCCCeEEEEecCccceeeee
Q psy2153 88 PKSL--KSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 88 ~~Tl--ksf~~~~~~~~~V~~Ma~~G--~GVWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
.++. ..+..|. ..|++++... ..+.++...+.+|++||..+.+....+
T Consensus 238 ~~~~~~~~~~~h~---~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 238 MDGKELWNLRMHK---KKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp SSSCBCCCSBCCS---SCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred cCcceeEEEeccc---ceEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence 8664 5566665 6799999874 447778889999999999887765544
No 140
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.022 Score=60.28 Aligned_cols=128 Identities=13% Similarity=0.089 Sum_probs=89.1
Q ss_pred CCccceeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE--------EcCCCCCceeeeeeeC---
Q psy2153 6 PTPYPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV--------TLGLPHHSVRSLAAVY--- 72 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I--------~LG~~~~PV~cml~v~--- 72 (325)
.+.++.++.++.|.++.+. .+.+++|..||+|.+|+...... . +..+ .+.....+|+++....
T Consensus 89 ~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~---~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 89 QKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL---S-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp CSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE---E-EEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred CcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc---c-cceeccccccccccccCCCCeEEEEEccCCC
Confidence 3566677778899999986 56899999999999998543211 0 0001 1111236899998875
Q ss_pred CEEEEEECCeEEEEcCCCC---ceeEecC---------------CCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccc
Q psy2153 73 NKVWCGYKNKIHVVDPKSL---KSFDAHP---------------RRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 73 ~~LW~g~gnkI~VIn~~Tl---ksf~~~~---------------~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e 133 (325)
+.|.+|+.+...+.|.++. +.|..|. .....|++++++.+| .-++...+.+|++||..+.+
T Consensus 165 ~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 165 GTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred CEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 3677777766339999887 4555441 112569999998776 55677889999999999988
Q ss_pred eeee
Q psy2153 134 HLQD 137 (325)
Q Consensus 134 ~Lqd 137 (325)
.++.
T Consensus 245 ~~~~ 248 (902)
T 2oaj_A 245 MIMA 248 (902)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7764
No 141
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.47 E-value=0.058 Score=54.11 Aligned_cols=120 Identities=13% Similarity=0.143 Sum_probs=87.2
Q ss_pred CCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEc
Q psy2153 15 LDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~~~----~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn 87 (325)
.+.|.|+.+..+ .++.|-.||+|.+|+-.... ..-.+.....+|+++.... ..|..|+.+ .|.+.|
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-------~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd 589 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-------LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD 589 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEE
T ss_pred CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-------EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 356899988653 58888899999998743211 1223332347899988774 356666664 599999
Q ss_pred CCCCceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 88 PKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 88 ~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
..+.+...... ....|+.++.+.++.|++...+..|++||.++.+.++++....
T Consensus 590 ~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~ 643 (694)
T 3dm0_A 590 LAEGKKLYSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDL 643 (694)
T ss_dssp TTTTEEEECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCC
T ss_pred CCCCceEEEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhcccc
Confidence 98884332211 2467999999999999999999999999999999999887653
No 142
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.46 E-value=0.096 Score=50.95 Aligned_cols=123 Identities=12% Similarity=0.051 Sum_probs=86.4
Q ss_pred CCccceeeCCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-CeEE
Q psy2153 6 PTPYPLNKILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIH 84 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g-nkI~ 84 (325)
+++.+.+.+|. |..+.+.++.++|+ .+|.|.+|+-.+-. +...+..-. .+|..+..+...+-+... +.|+
T Consensus 79 ~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl~-----~~~~~~~~~--~~v~~i~~~~p~~av~~~dG~L~ 149 (388)
T 1xip_A 79 LTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEELS-----EFRTVTSFE--KPVFQLKNVNNTLVILNSVNDLS 149 (388)
T ss_dssp CCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEESSSTT-----CEEEEEECS--SCEEEEEECSSEEEEEETTSEEE
T ss_pred ccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchhhh-----ccCccceee--cceeeEEecCCCEEEEECCCCEE
Confidence 45667889999 99999966677777 99999999843321 222233322 567777666655554444 5699
Q ss_pred EEcCCCCceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccce--eeeeecch
Q psy2153 85 VVDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH--LQDVDIEP 142 (325)
Q Consensus 85 VIn~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~--LqdIdIa~ 142 (325)
++|.++.+.-. ....|++++|+.+|.- ....+.++++|+..+.+. ..+|..-+
T Consensus 150 v~dl~~~~~~~----~~~~Vs~v~WSpkG~~-vg~~dg~i~~~~~~~~~~~~k~~I~~Pp 204 (388)
T 1xip_A 150 ALDLRTKSTKQ----LAQNVTSFDVTNSQLA-VLLKDRSFQSFAWRNGEMEKQFEFSLPS 204 (388)
T ss_dssp EEETTTCCEEE----EEESEEEEEECSSEEE-EEETTSCEEEEEEETTEEEEEEEECCCH
T ss_pred EEEccCCcccc----ccCCceEEEEcCCceE-EEEcCCcEEEEcCCCccccccceecCCc
Confidence 99988764322 2257999999999954 555678899999998886 77774433
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.44 E-value=0.075 Score=46.45 Aligned_cols=126 Identities=18% Similarity=0.272 Sum_probs=84.9
Q ss_pred CCCccceeeCCC---ceeeeEEeC-C-eEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCC---Cceeeeeee--CC
Q psy2153 5 HPTPYPLNKILD---TALPPVHVQ-G-RVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSVRSLAAV--YN 73 (325)
Q Consensus 5 ~~~~L~~IkL~d---sVl~I~~~~-~-~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~---~PV~cml~v--~~ 73 (325)
..+.++.++++. .+.++.+.. + ++|++-. +|+|.+|+... + +....+.++.+. ..+.++... ++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-~----~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 94 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT-G----ETLGRIDLSTPEERVKSLFGAALSPDGK 94 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT-C----CEEEEEECCBTTEEEECTTCEEECTTSS
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC-C----CeEeeEEcCCcccccccccceEECCCCC
Confidence 456788889888 788888864 3 6777654 57899998533 2 122345554311 134455444 35
Q ss_pred EEEEEE-------------CCeEEEEcCCCCc---eeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCcccee
Q psy2153 74 KVWCGY-------------KNKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 74 ~LW~g~-------------gnkI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~L 135 (325)
.||++. .++|+++|.++.+ .+.. ...+..++.+.+| ++++ +..|++||..+.+.+
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 95 TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA----PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLV 167 (337)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC----CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEE
T ss_pred EEEEEecccccccccccccCceEEEEECCCCcEEEEEeC----CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEe
Confidence 789885 4789999998873 3332 2457778887555 6655 688999999999998
Q ss_pred eeeecch
Q psy2153 136 QDVDIEP 142 (325)
Q Consensus 136 qdIdIa~ 142 (325)
..+....
T Consensus 168 ~~~~~~~ 174 (337)
T 1pby_B 168 EDKPIQS 174 (337)
T ss_dssp EEECSTT
T ss_pred eeeeccc
Confidence 8887654
No 144
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.30 E-value=0.02 Score=51.65 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=79.4
Q ss_pred CCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcC
Q psy2153 14 ILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDP 88 (325)
Q Consensus 14 L~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~ 88 (325)
-.+.|.++.+. .+.+++|-.||+|.+|+-.....|.. .+.+.-+ ...+|+++.... ..|..|+.+ .|.+.|.
T Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 99 LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV--SKHLKRP-LRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC--CEEECSS-CCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred cCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee--eeEeecc-cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 45789999986 44788888999999988655443432 2233321 247899988775 357777775 5999997
Q ss_pred CCC------------------ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccce----eeeee
Q psy2153 89 KSL------------------KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH----LQDVD 139 (325)
Q Consensus 89 ~Tl------------------ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~----LqdId 139 (325)
.+. +..... .....|++++.+.+| ..++...+.+|++||..+.+. ++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence 532 011111 344779999998666 455667899999999999887 55544
No 145
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.28 E-value=0.094 Score=44.99 Aligned_cols=112 Identities=14% Similarity=0.077 Sum_probs=71.8
Q ss_pred ceeeeEEe-CCeEEE-E-ecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEE-CCeEEEEcCCCC
Q psy2153 17 TALPPVHV-QGRVVC-A-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY-KNKIHVVDPKSL 91 (325)
Q Consensus 17 sVl~I~~~-~~~VfV-g-LANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~-gnkI~VIn~~Tl 91 (325)
...+|... ++++|| + ..+|.|.+|+...... ..+..+. ...+.+|..- +++||++. .++|+++++++.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~------~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT------TVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----------EECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCS
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc------ceEeeCC-cCCcceeEECCCCCEEEEcCCCEEEEEeCCCc
Confidence 56677764 678999 7 6778999997432211 1111221 1234565554 46899998 468999998876
Q ss_pred ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcccee
Q psy2153 92 KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 92 ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~L 135 (325)
............+..|+.+.+| +|++-..+..|..|+..+.+..
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence 3222222233568889887444 9999888889999987776543
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.27 E-value=0.093 Score=46.22 Aligned_cols=67 Identities=13% Similarity=0.233 Sum_probs=49.1
Q ss_pred CCEEEEEECCeEEEEcCCCCceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 72 YNKVWCGYKNKIHVVDPKSLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 72 ~~~LW~g~gnkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
++.||++ .++|+++|.++.+....-. ....+..++.+.+ .+|++ ..+..|++||.++.+.+..|.+.
T Consensus 267 g~~l~~~-~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 267 PNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTTEEEEEEECS
T ss_pred CCEEEEE-cCeEEEEECccCeEEEEEc-CCCCccceEECCCCCEEEEe-cCCCeEEEEeccccceeeeeecC
Confidence 3478888 8899999999884322111 1234678888744 48875 66799999999999999988765
No 147
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.23 E-value=0.064 Score=56.77 Aligned_cols=115 Identities=10% Similarity=0.075 Sum_probs=80.6
Q ss_pred eeeCCCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCE-EEEEEC-CeEEEE
Q psy2153 11 LNKILDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNK-VWCGYK-NKIHVV 86 (325)
Q Consensus 11 ~IkL~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~-LW~g~g-nkI~VI 86 (325)
..-.++.|.|+.+.. ..+.+|-.||+|.+|+.... .....++. ..+|+++....++ |-.++. +.|.+.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~-------~~~~~~~~-~~~V~~l~fspg~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV-------EVVIKLED-RSAIKEMRFVKGIYLVVINAKDTVYVL 84 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC-------EEEEECSS-CCCEEEEEEETTTEEEEEETTCEEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc-------EEEEEcCC-CCCEEEEEEcCCCEEEEEECcCeEEEE
Confidence 345689999999974 46778899999999974321 12233432 4799999877665 666666 459999
Q ss_pred cCCCCceeEecCCCCCceeEEEEeCCeEEEE-EeCCCeEEEEecCccce
Q psy2153 87 DPKSLKSFDAHPRRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 87 n~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS-~~~ss~IrL~ha~T~e~ 134 (325)
|.++.+...... ....|++++.+.+|=|++ -..+.+|++||..+.+.
T Consensus 85 d~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 85 SLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp ETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred ECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 998873322211 225799999986664444 46789999999998875
No 148
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.21 E-value=0.17 Score=45.38 Aligned_cols=114 Identities=18% Similarity=0.143 Sum_probs=75.7
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee----CCEEEEEECC-eEEEEc
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV----YNKVWCGYKN-KIHVVD 87 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v----~~~LW~g~gn-kI~VIn 87 (325)
.++|.++.+. .+++..|-.||+|.+|+-..++. .....+.....+|+++... ++.|-.|+.+ .|.+.|
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-----~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-----ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-----EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-----EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 4689999885 45788888899999998543210 0122332224799998864 3456666664 499999
Q ss_pred CCCC--ceeEecCCCCCceeEEEEeCC--e-EEEEEeCCCeEEEEecCccc
Q psy2153 88 PKSL--KSFDAHPRRESQVRQMTWAGD--G-VWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 88 ~~Tl--ksf~~~~~~~~~V~~Ma~~G~--G-VWiS~~~ss~IrL~ha~T~e 133 (325)
.++. +...........|++++.+.. | .-++...+.+|++||..+.+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 8875 222111223367999999754 4 55677889999999988753
No 149
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.19 E-value=0.18 Score=46.50 Aligned_cols=117 Identities=10% Similarity=0.143 Sum_probs=78.2
Q ss_pred CceeeeEEe---CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCC
Q psy2153 16 DTALPPVHV---QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPK 89 (325)
Q Consensus 16 dsVl~I~~~---~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~ 89 (325)
+.|.++.+. .+.+..|-.||+|.+|+-...+ .....+ -|. ..+|+++.... ..|..|+.+ .|.+.|..
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~----~~~~~~-~~h-~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITS----RAVRTY-HGH-EGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC----CCCEEE-CCC-SSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC----cceEEE-CCc-CCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 467888773 4567778889999999843221 111222 232 47899988774 456666665 49999999
Q ss_pred CCce---eEecCCC----CCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeee
Q psy2153 90 SLKS---FDAHPRR----ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 90 Tlks---f~~~~~~----~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
+.+. +..++.. ...|+.++.+..| .-++-..+..|++||..+.+.+..+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 8743 3333321 2348888887555 4456677999999999988877655
No 150
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.06 E-value=0.17 Score=51.18 Aligned_cols=81 Identities=11% Similarity=0.040 Sum_probs=59.5
Q ss_pred CCccceeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee------CCEEEE
Q psy2153 6 PTPYPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV------YNKVWC 77 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v------~~~LW~ 77 (325)
.+.+.+|.+...+..+... ..++||+-.+|.|.+|+-... ..+....|.+|. .| +.+..- +..+|+
T Consensus 187 ~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~---t~~~v~~i~~G~--~P-~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 187 YEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK---EPTTVAEIKIGS--EA-RSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp CCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSS---SCCEEEEEECCS--EE-EEEEECCSTTCTTTEEEE
T ss_pred CeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCC---CCcEeEEEecCC--CC-ceeEEccccCCCCCEEEE
Confidence 4678888888888888886 457999999999999984211 223346688887 55 455554 347998
Q ss_pred EEC--CeEEEEcCCCCc
Q psy2153 78 GYK--NKIHVVDPKSLK 92 (325)
Q Consensus 78 g~g--nkI~VIn~~Tlk 92 (325)
++. ++|.|||+.|++
T Consensus 261 ~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 261 GAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EEEETTEEEEEETTTCC
T ss_pred EEccCCeEEEEECCCCc
Confidence 775 789999999983
No 151
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.01 E-value=0.1 Score=51.97 Aligned_cols=115 Identities=15% Similarity=0.089 Sum_probs=80.2
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeee--eeC-C-EE-EEEECC-eEEEEcC
Q psy2153 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLA--AVY-N-KV-WCGYKN-KIHVVDP 88 (325)
Q Consensus 16 dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml--~v~-~-~L-W~g~gn-kI~VIn~ 88 (325)
+.|+|+.+. ++.+.+|-.||+|.+|+-.... .+...+.... .+|+++. .-. + ++ -.|+.+ .|.+.|.
T Consensus 267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~----~~~~~~~~H~--~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~ 340 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDPE----VPSFYDQVHD--SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNP 340 (524)
T ss_dssp TCEEEEEESSSSEEEEEETTSEEEEEETTBCS----SCSEEEECSS--SCEEEEEEECCTTSCCEEEEEETTSEEEEECG
T ss_pred CCEEEEEecCCCeEEEEeCCCEEEEEECCCCC----CceEEeeccc--ccEEEEEEEcCCCCCeEEEEeccCCeEEEEEC
Confidence 579999874 5689999999999999854321 1223344433 7999983 222 3 44 445554 5999999
Q ss_pred CCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeee
Q psy2153 89 KSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQD 137 (325)
Q Consensus 89 ~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~Lqd 137 (325)
++. +.+..|.+. ..|..++.+.+| .+++-..+.+|++||..+.+.+..
T Consensus 341 ~~~~~~~~~~~~~~~-~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~ 392 (524)
T 2j04_B 341 KDIATTKTTVSRFRG-SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP 392 (524)
T ss_dssp GGHHHHCEEEEECSC-CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE
T ss_pred CCCCccccccccccc-CcccceEeCCCcCeEEEeCCCCcEEEEECccccccee
Confidence 886 466666532 347788888654 677888899999999998876544
No 152
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.00 E-value=0.087 Score=53.34 Aligned_cols=116 Identities=22% Similarity=0.351 Sum_probs=78.0
Q ss_pred eEEeC-CeEEEE--ecCCcEEEEEcCCCCC----CCCCCCeEEEcCCCCCcee-eeeeeCCEEEEEEC--------CeEE
Q psy2153 21 PVHVQ-GRVVCA--LADGSVAIFRRGPDGQ----WDLSKYHTVTLGLPHHSVR-SLAAVYNKVWCGYK--------NKIH 84 (325)
Q Consensus 21 I~~~~-~~VfVg--LANGtLaVF~R~~~g~----WD~~~~~~I~LG~~~~PV~-cml~v~~~LW~g~g--------nkI~ 84 (325)
+.+-+ +.||+. |.+|+|.||+-+..+. |. ..+.|..+. ..|+- ..-.-+..||+... ++|.
T Consensus 395 ~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~k--vv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~ 471 (567)
T 1qks_A 395 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWK--ILDSFPALG-GGSLFIKTHPNSQYLYVDATLNPEAEISGSVA 471 (567)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTS--EEEEEECSC-SCCCCEECCTTCSEEEEECTTCSSHHHHTCEE
T ss_pred eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCE--EEEEEecCC-CCCEEEEeCCCCCeEEEecCCCCCcccCceEE
Confidence 44544 789975 4678999998654332 43 335566542 13321 11222358999883 5899
Q ss_pred EEcCCCC------ceeEecC--------CCCCceeEEEEe--CCeEEEEEe----CCCeEEEEecCccceeeeee
Q psy2153 85 VVDPKSL------KSFDAHP--------RRESQVRQMTWA--GDGVWVSIR----LDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 85 VIn~~Tl------ksf~~~~--------~~~~~V~~Ma~~--G~GVWiS~~----~ss~IrL~ha~T~e~LqdId 139 (325)
|||..++ +.|++-+ .....+.++... |.-||+|.. .++.|-++|.+|++.+..|.
T Consensus 472 v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 472 VFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp EEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred EEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 9999887 2333321 235678899987 556999986 37899999999999988887
No 153
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.99 E-value=0.2 Score=45.56 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=77.7
Q ss_pred CCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECCe-EEEEcCC
Q psy2153 15 LDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNK-IHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gnk-I~VIn~~ 89 (325)
.+.|.++.+. .++++.|-.||++.+|+.+.+. + .....+.....+|+++.... +.|..|+.+. |.+.|..
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-~----~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-F----ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC--E----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-e----EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 3589999986 3467788889999999854321 1 11223433347899988764 4666677654 9999887
Q ss_pred CCc---eeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccce
Q psy2153 90 SLK---SFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 90 Tlk---sf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~ 134 (325)
+.+ ....-......|++++++.+| .-++...+.+|++||..+.+.
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW 184 (345)
T ss_dssp TTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE
T ss_pred CCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE
Confidence 652 222222334779999998655 555777899999999887653
No 154
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.94 E-value=0.046 Score=47.97 Aligned_cols=114 Identities=9% Similarity=0.062 Sum_probs=72.9
Q ss_pred CCeEEEE-ecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEEC--CeEEEEcCC--CC--ceeE
Q psy2153 25 QGRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK--SL--KSFD 95 (325)
Q Consensus 25 ~~~VfVg-LANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~g--nkI~VIn~~--Tl--ksf~ 95 (325)
++.+|++ -.+|+|.+|+.+..|.+. ....+..+ .++.++..- ++.|++++. ++|.+++.. +. +...
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALT--LTQVVDVP---GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA 78 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEE--EEEEEECS---SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEE--EeeeEecC---CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecc
Confidence 3568888 679999999875444321 11223333 345666554 356999888 678886554 33 3222
Q ss_pred ecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEec---Cccceeeeeecchhh
Q psy2153 96 AHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA---HTYQHLQDVDIEPYV 144 (325)
Q Consensus 96 ~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha---~T~e~LqdIdIa~~v 144 (325)
..+.. ..+..++++.+| +|++-..+..|++||. .+.+.++.+.....+
T Consensus 79 ~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 131 (343)
T 1ri6_A 79 ESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGC 131 (343)
T ss_dssp EEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTB
T ss_pred ccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCc
Confidence 22212 277888887555 8888888999999999 777777777655443
No 155
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.92 E-value=0.26 Score=42.94 Aligned_cols=113 Identities=10% Similarity=0.138 Sum_probs=73.0
Q ss_pred ceeeeEE--eCCeEEEEec--CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEEC--CeEEEEcCC
Q psy2153 17 TALPPVH--VQGRVVCALA--DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK--NKIHVVDPK 89 (325)
Q Consensus 17 sVl~I~~--~~~~VfVgLA--NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~g--nkI~VIn~~ 89 (325)
.+..|.. .++++||+-. ++.|.+|+. +|. ....+..+. ...++.+..- ++++|++.. ++|++++++
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~--~g~----~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQ--YGQ----FVRKFGATI-LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECT--TSC----EEEEECTTT-CSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECC--CCc----EEEEecCcc-CCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 5677777 4789999985 789999973 332 112222222 1334565544 468999864 679999976
Q ss_pred CC--ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeee
Q psy2153 90 SL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 90 Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
.. +.+.. ......++.|+.+.+| +|++-..+..|++||... +.+..+
T Consensus 151 g~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~ 200 (286)
T 1q7f_A 151 GNVLHKFGC-SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQI 200 (286)
T ss_dssp SCEEEEEEC-TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEE
T ss_pred CCEEEEeCC-CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEE
Confidence 54 33322 1233568889988644 999988899999999743 444443
No 156
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.76 E-value=0.56 Score=40.23 Aligned_cols=106 Identities=10% Similarity=0.124 Sum_probs=69.6
Q ss_pred CceeeeEEe-CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEE--CCeEEEEcCCC
Q psy2153 16 DTALPPVHV-QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGY--KNKIHVVDPKS 90 (325)
Q Consensus 16 dsVl~I~~~-~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~--gnkI~VIn~~T 90 (325)
..+.+|... ++++|++-. +|.|..|+.. |.. ..+.+......++.+..- +++||++. .+.|+++++..
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~-----~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g 176 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD--GTI-----YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNTG 176 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT--SCE-----EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC--CCE-----EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCCC
Confidence 456777765 678999876 6788888743 321 122332222345566553 47899998 56899999832
Q ss_pred C-ceeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEec
Q psy2153 91 L-KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNA 129 (325)
Q Consensus 91 l-ksf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha 129 (325)
. ..+.. +.....+..|+.+.+ .+|++-.....|..||.
T Consensus 177 ~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 177 KLEEYPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp CEEEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred cEEEeeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 2 33322 233467888888744 59999988889999997
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.73 E-value=0.14 Score=45.05 Aligned_cols=128 Identities=16% Similarity=0.119 Sum_probs=81.1
Q ss_pred CCCccceeeCCC--ceeeeEEeC-C-eEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCC----CCceeeeeee--CC
Q psy2153 5 HPTPYPLNKILD--TALPPVHVQ-G-RVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLP----HHSVRSLAAV--YN 73 (325)
Q Consensus 5 ~~~~L~~IkL~d--sVl~I~~~~-~-~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~----~~PV~cml~v--~~ 73 (325)
..+.++.+.++. .+..+.+.. + ++|++- .+|+|.+|+... + +....+.++.. ...+.++..- +.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t-~----~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 104 (349)
T 1jmx_B 30 SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT-C----KNTFHANLSSVPGEVGRSMYSFAISPDGK 104 (349)
T ss_dssp TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT-T----EEEEEEESCCSTTEEEECSSCEEECTTSS
T ss_pred CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCC-C----cEEEEEEcccccccccccccceEECCCCC
Confidence 346677888887 777887763 3 477765 578899998533 2 11234555431 1125555554 34
Q ss_pred EEEEEE-------------CCeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceee
Q psy2153 74 KVWCGY-------------KNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 74 ~LW~g~-------------gnkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
.|+++. .+.|+++|.++. +........ ..+..|+.+.+| +|++ +..|++||..+.+.++
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~l~~~---~~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 105 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTV 180 (349)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEE
T ss_pred EEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCcEEEc---cCcEEEEeCCCCceec
Confidence 788887 578999998884 322222211 357778876444 6653 4459999999999888
Q ss_pred eeecc
Q psy2153 137 DVDIE 141 (325)
Q Consensus 137 dIdIa 141 (325)
.+...
T Consensus 181 ~~~~~ 185 (349)
T 1jmx_B 181 ALPLR 185 (349)
T ss_dssp EECST
T ss_pred ccccc
Confidence 77654
No 158
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.63 E-value=0.18 Score=44.45 Aligned_cols=110 Identities=10% Similarity=0.058 Sum_probs=68.8
Q ss_pred CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC--CeEEEEcCCCCce-eEecC
Q psy2153 25 QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKSLKS-FDAHP 98 (325)
Q Consensus 25 ~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g--nkI~VIn~~Tlks-f~~~~ 98 (325)
.+++||+-. +|+|.+|+... + +....+.++. .+. ++..-. +.||+++. ++|+++|.++.+. ...-.
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~-~----~~~~~~~~~~--~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDT-L----EILNQITLGY--DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTT-C----CEEEEEECCC--CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcc-c----ceeeeEEccC--Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 567777654 57899998543 2 1224556654 455 655543 46998886 4799999988743 21111
Q ss_pred CCCCceeE-EEEeCCeEEEEEeCCC----eEEEEecCccceeeeeecchh
Q psy2153 99 RRESQVRQ-MTWAGDGVWVSIRLDS----TLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 99 ~~~~~V~~-Ma~~G~GVWiS~~~ss----~IrL~ha~T~e~LqdIdIa~~ 143 (325)
.. ..... ++.+.+|=++...... .|++||.++.+.++.+.....
T Consensus 81 ~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 129 (331)
T 3u4y_A 81 EG-QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD 129 (331)
T ss_dssp EC-SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT
T ss_pred cC-CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC
Confidence 11 23344 7777555333344433 999999999999988876543
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=95.57 E-value=0.068 Score=49.88 Aligned_cols=108 Identities=12% Similarity=0.177 Sum_probs=74.9
Q ss_pred CCeEEEE------ecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE-----------CCeEEE
Q psy2153 25 QGRVVCA------LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (325)
Q Consensus 25 ~~~VfVg------LANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~-----------gnkI~V 85 (325)
..++||. ..+|++.+|+-.. + +....++.|. .| .+... +..||+++ .+.|.+
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t-~----~~~~~i~~g~--~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTN-G----KFLGMVPTAF--NG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTT-C----CEEEEEECCE--EE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCEEEEECCCCCccccCeEEEEECCC-C----eEEEEecCCC--CC--ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence 3578886 3578999997433 2 2225677776 67 55555 35899987 256999
Q ss_pred EcCCCC---ceeEecCC---CCCceeEEEEe--CCeEEEEEeC-CCeEEEEecCccceeee-eecc
Q psy2153 86 VDPKSL---KSFDAHPR---RESQVRQMTWA--GDGVWVSIRL-DSTLRMYNAHTYQHLQD-VDIE 141 (325)
Q Consensus 86 In~~Tl---ksf~~~~~---~~~~V~~Ma~~--G~GVWiS~~~-ss~IrL~ha~T~e~Lqd-IdIa 141 (325)
||+.++ +.+.+... .......|+.+ |.-+|++-.. +.+|.+||..+.+.+.+ |.+.
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~ 151 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA 151 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC
Confidence 999998 34444322 12456678886 4558888765 78999999999999998 7763
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.56 E-value=0.55 Score=40.80 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=71.9
Q ss_pred ceeeeEEe-CCeEEEE-ecCCcEEEEEcCCCCCCCCCCCeEEEcCCC------CCceeeeee--eCCEEEEEE---CCeE
Q psy2153 17 TALPPVHV-QGRVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLP------HHSVRSLAA--VYNKVWCGY---KNKI 83 (325)
Q Consensus 17 sVl~I~~~-~~~VfVg-LANGtLaVF~R~~~g~WD~~~~~~I~LG~~------~~PV~cml~--v~~~LW~g~---gnkI 83 (325)
.+.+|... ++++||+ ..+|.|.+|+.+ |. ..-.++.. ...+..+.. -+++||++. .+.|
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~--g~------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE--GR------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT--SC------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC--Cc------EEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 46666664 5788888 578899999753 21 11122210 123456655 368999998 4679
Q ss_pred EEEcCCCC--ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 84 HVVDPKSL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 84 ~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
++++.+.. +.+. ......+..|+.+.+| +|++-..+..|++||.. .+.+..+.
T Consensus 103 ~~~d~~g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 158 (286)
T 1q7f_A 103 QIYNQYGQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFG 158 (286)
T ss_dssp EEECTTSCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE
T ss_pred EEECCCCcEEEEec--CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeC
Confidence 99995433 2332 2234568888887554 99998888999999965 45555554
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=95.54 E-value=0.28 Score=47.12 Aligned_cols=128 Identities=12% Similarity=-0.017 Sum_probs=79.4
Q ss_pred ceeeCCCceeeeEEeC--CeEEE----EecCCcEEEEEcCCC--CCCCC-CCCeEEEcCC-CCCceeeeeeeC---CEEE
Q psy2153 10 PLNKILDTALPPVHVQ--GRVVC----ALADGSVAIFRRGPD--GQWDL-SKYHTVTLGL-PHHSVRSLAAVY---NKVW 76 (325)
Q Consensus 10 ~~IkL~dsVl~I~~~~--~~VfV----gLANGtLaVF~R~~~--g~WD~-~~~~~I~LG~-~~~PV~cml~v~---~~LW 76 (325)
..++++..|.++.+.. ++++| |-.||+|.||+-... +.+.. .+...+.+-. ...+|+++.... +.|-
T Consensus 87 ~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 87 LLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEE
T ss_pred ccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEE
Confidence 4567788999999863 34553 335889999985321 22222 1222344421 236899988764 3455
Q ss_pred EEECC-eEEEEcCCCCceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCccceeeee
Q psy2153 77 CGYKN-KIHVVDPKSLKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 77 ~g~gn-kI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~LqdI 138 (325)
.++.+ .|.+.|.++.+...........|++++++.+| .-++-..+.+|++||.. .+....+
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred EEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 56664 49999998873322222234789999998655 33355678999999987 4444433
No 162
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.51 E-value=0.23 Score=48.18 Aligned_cols=133 Identities=16% Similarity=0.065 Sum_probs=84.6
Q ss_pred CCCCccceeeCCC-ceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCC-CCeEEEcCCCCCceeeeeeeCCEEEEE
Q psy2153 4 PHPTPYPLNKILD-TALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLS-KYHTVTLGLPHHSVRSLAAVYNKVWCG 78 (325)
Q Consensus 4 ~~~~~L~~IkL~d-sVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~-~~~~I~LG~~~~PV~cml~v~~~LW~g 78 (325)
+.|++++..+... +|+.|+... |-|.|+|.|=.+.--+.-+-+.+|-. .+..+.-|. ...|.. .-++++.++
T Consensus 74 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~-~~~v~~--l~~g~lv~s 150 (356)
T 2w18_A 74 WQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGN-IKAVLG--LTKRRLVSS 150 (356)
T ss_dssp SBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEE-EEEEEE--ETTTEEEEE
T ss_pred ccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCC-eEEEEe--cCCCcEEEe
Confidence 4578888888887 899999875 78999999876554443332222211 223334332 122323 236889888
Q ss_pred E----CCeEEEEcCCC-C---ceeEecCCCCCceeEEEE-eCCe-EEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 79 Y----KNKIHVVDPKS-L---KSFDAHPRRESQVRQMTW-AGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 79 ~----gnkI~VIn~~T-l---ksf~~~~~~~~~V~~Ma~-~G~G-VWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
+ ..+|.+++... . .++..|+.... +-.++- .|++ .-+|-+.|.+||+||.+|.+.++.+.-
T Consensus 151 s~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 151 SGTLSDQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp ESSSTTCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cccCCCCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 6 45688888744 3 45566764433 333443 4444 555679999999999999999999864
No 163
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.46 E-value=0.34 Score=47.93 Aligned_cols=117 Identities=8% Similarity=0.087 Sum_probs=79.6
Q ss_pred CCceeeeEEeC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCC--EEEEEECC-----eEEE
Q psy2153 15 LDTALPPVHVQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYN--KVWCGYKN-----KIHV 85 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~--~LW~g~gn-----kI~V 85 (325)
.+.|.++.+.. .++..|-.||+|.+++..... ......+.....+|+++..-.+ .|-.+..+ +|++
T Consensus 59 ~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~-----~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 59 SHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT-----HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT-----CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEE
T ss_pred CCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc-----ceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEE
Confidence 36799998864 356667789999999853211 1112222222378999887753 44444432 6888
Q ss_pred EcCCCC-ceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCccceeeeee
Q psy2153 86 VDPKSL-KSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 86 In~~Tl-ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.++.+. +.+..|. ..|+.++.+.++ .-++...+.+|++||..+.+.++.+.
T Consensus 134 wd~~~~~~~l~gh~---~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~ 187 (611)
T 1nr0_A 134 FDTGTSNGNLTGQA---RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 187 (611)
T ss_dssp TTTCCBCBCCCCCS---SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC
T ss_pred eeCCCCcceecCCC---CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec
Confidence 886555 5666665 679999988665 67889999999999999988766553
No 164
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.42 E-value=0.11 Score=50.55 Aligned_cols=109 Identities=8% Similarity=0.010 Sum_probs=77.6
Q ss_pred eCCeEEEEec-----CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE-----------CCeEEE
Q psy2153 24 VQGRVVCALA-----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (325)
Q Consensus 24 ~~~~VfVgLA-----NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~-----------gnkI~V 85 (325)
..++|||+-. +|+|.|++-... +.-..|++|. .| . |.+- +..||++. .|.|.+
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~-----~v~~~I~vG~--~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAG-----RVIGMIDGGF--LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTT-----EEEEEEEECS--SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCC-----eEEEEEECCC--CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 3678999976 579999984321 2336788998 67 3 4444 35799987 367999
Q ss_pred EcCCCCc---eeEecCC----CCCceeEEEEe--CCeEEEEEeC-CCeEEEEecCccceeeeeecc
Q psy2153 86 VDPKSLK---SFDAHPR----RESQVRQMTWA--GDGVWVSIRL-DSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 86 In~~Tlk---sf~~~~~----~~~~V~~Ma~~--G~GVWiS~~~-ss~IrL~ha~T~e~LqdIdIa 141 (325)
||+.|++ .+.+... ....-..|+.+ |..+|++-.. +..|.++|+.|.+.+.+|++.
T Consensus 114 iD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 9999993 4555321 12344557765 5558988654 789999999999999999874
No 165
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.39 E-value=1.2 Score=38.43 Aligned_cols=107 Identities=17% Similarity=0.267 Sum_probs=71.8
Q ss_pred eeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC-eEEEEcCCCCc---
Q psy2153 19 LPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN-KIHVVDPKSLK--- 92 (325)
Q Consensus 19 l~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn-kI~VIn~~Tlk--- 92 (325)
.+|-+..+.+++.=.|++|.|++-.. | +..+.+.+.....+|+|+.... +.|..|+.+ .|.+.+.++.+
T Consensus 29 ~~l~WS~~~~lAvg~D~tV~iWd~~t-g----~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 29 NLVDWSSGNVLAVALDNSVYLWSASS-G----DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTT-C----CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEEECCCCEEEEEeCCEEEEEECCC-C----CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 45667655555544589998887332 1 2224566655567899987775 467777775 49999999984
Q ss_pred eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccce
Q psy2153 93 SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 93 sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~ 134 (325)
.++.|. ..+.++...+. +-.+...+..+++|+..+...
T Consensus 104 ~~~~h~---~~~~~~~~~~~-~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 104 NMTSHS---ARVGSLSWNSY-ILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp EEECCS---SCEEEEEEETT-EEEEEETTSEEEEEETTSSSC
T ss_pred EecCcc---ceEEEeecCCC-EEEEEecCCceEeeecCCCce
Confidence 444444 66777777765 445778888899998776543
No 166
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.37 E-value=0.11 Score=53.24 Aligned_cols=137 Identities=15% Similarity=0.052 Sum_probs=88.3
Q ss_pred CccceeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcC---CCCCceeeeeeeCCEEEEEE
Q psy2153 7 TPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG---LPHHSVRSLAAVYNKVWCGY 79 (325)
Q Consensus 7 ~~L~~IkL~ds---Vl~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG---~~~~PV~cml~v~~~LW~g~ 79 (325)
+++|+.++++. ...-+..+++||++..+|.|..++...+. .|..+........ .....-+.....+++|++++
T Consensus 56 ~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~ 135 (677)
T 1kb0_A 56 GLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA 135 (677)
T ss_dssp EEEEEEECCCCSCCCCCCEEETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC
T ss_pred cEEEEEECCCCCCceeCCEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc
Confidence 67899888753 23455689999999999999999965432 4754322110000 00001123455789999998
Q ss_pred C-CeEEEEcCCCCc---eeEecCC--CCCcee-EEEEeCCeEEEEEeC-----CCeEEEEecCccceeeeeecchh
Q psy2153 80 K-NKIHVVDPKSLK---SFDAHPR--RESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 80 g-nkI~VIn~~Tlk---sf~~~~~--~~~~V~-~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
. ++++.||++|.+ ++....+ ....++ .-+..+..|++.... +..|+.||++|.+.+..++..+.
T Consensus 136 ~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 211 (677)
T 1kb0_A 136 WDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPG 211 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC
T ss_pred CCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCC
Confidence 5 579999999984 3343311 111222 234456778877653 68999999999999999987543
No 167
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.33 E-value=0.23 Score=49.90 Aligned_cols=139 Identities=11% Similarity=-0.023 Sum_probs=87.0
Q ss_pred CCccceeeCCCc---eeeeEEeCCeEEEEec-CCcEEEEEc-CCCC-CCCCCCCeEEEc-CCCC-Cc-eeeeeeeCCEEE
Q psy2153 6 PTPYPLNKILDT---ALPPVHVQGRVVCALA-DGSVAIFRR-GPDG-QWDLSKYHTVTL-GLPH-HS-VRSLAAVYNKVW 76 (325)
Q Consensus 6 ~~~L~~IkL~ds---Vl~I~~~~~~VfVgLA-NGtLaVF~R-~~~g-~WD~~~~~~I~L-G~~~-~P-V~cml~v~~~LW 76 (325)
.+++|+.++++. -..-+..+++||++-. +|.|..++. ..+. .|..+....... ..+. .+ -+.....+++|+
T Consensus 40 l~~~W~~~~~~~~g~~~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 119 (571)
T 2ad6_A 40 VKAAWSFSTGVLNGHEGAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIV 119 (571)
T ss_dssp CEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEE
T ss_pred ccEEEEEECCCCCCcccccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEE
Confidence 366888888742 2445567999999999 899999996 3322 465332110000 0000 00 122345689999
Q ss_pred EEEC-CeEEEEcCCCCce---eEecCC-CCCcee-EEEEeCCeEEEEEeC-----CCeEEEEecCccceeeeeecchhh
Q psy2153 77 CGYK-NKIHVVDPKSLKS---FDAHPR-RESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIEPYV 144 (325)
Q Consensus 77 ~g~g-nkI~VIn~~Tlks---f~~~~~-~~~~V~-~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~e~LqdIdIa~~v 144 (325)
+++. ++++.||++|.+. ++.... ....++ .-+..+.-|++.... +..|+.||++|.+.+..++..+..
T Consensus 120 v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 198 (571)
T 2ad6_A 120 KKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSD 198 (571)
T ss_dssp EECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred EEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCc
Confidence 9986 6799999999842 222110 011222 223356678877664 689999999999999999986543
No 168
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.31 E-value=0.089 Score=47.32 Aligned_cols=111 Identities=16% Similarity=0.279 Sum_probs=71.4
Q ss_pred CCceeeeEEeCC----eEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC------------------
Q psy2153 15 LDTALPPVHVQG----RVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY------------------ 72 (325)
Q Consensus 15 ~dsVl~I~~~~~----~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~------------------ 72 (325)
.++|.++.+..+ .+..|-.||++.+|+....+.|+... .+.....+|.++....
T Consensus 103 ~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
T 3bg1_A 103 DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK----INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNY 178 (316)
T ss_dssp SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC----BTTSSSSCBCCCEECCCCCC------CCSCCCCC
T ss_pred CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee----eeccccCCcceEEEccccCCccccccccccCccc
Confidence 468999998743 57788899999999876554553211 0111123454443322
Q ss_pred -CEEEEEEC-CeEEEEcCCCC------ceeEecCCCCCceeEEEEeCC-----eEEEEEeCCCeEEEEecCcc
Q psy2153 73 -NKVWCGYK-NKIHVVDPKSL------KSFDAHPRRESQVRQMTWAGD-----GVWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 73 -~~LW~g~g-nkI~VIn~~Tl------ksf~~~~~~~~~V~~Ma~~G~-----GVWiS~~~ss~IrL~ha~T~ 132 (325)
..|-.|+. +.|.+.|.++. +.|+.|. ..|++++.+.. ...++...+.+|++||..+.
T Consensus 179 ~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~---~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 179 IKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS---DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp CCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS---SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred cceEEEecCCCeEEEEEeCCCCccceeeecccCC---CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 23444554 44888887543 3344444 67999998765 36789999999999998763
No 169
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.30 E-value=0.07 Score=54.68 Aligned_cols=135 Identities=14% Similarity=0.081 Sum_probs=86.4
Q ss_pred CccceeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcC--CCCCce-eeeeeeCCEEEEEE
Q psy2153 7 TPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLG--LPHHSV-RSLAAVYNKVWCGY 79 (325)
Q Consensus 7 ~~L~~IkL~ds---Vl~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG--~~~~PV-~cml~v~~~LW~g~ 79 (325)
+.+|+.++++. -..-+..+++||++..+|.|..++...+. .|..+.......+ ....++ +.....+++|++++
T Consensus 45 ~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 124 (668)
T 1kv9_A 45 GLAWYMDLDNTRGLEATPLFHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT 124 (668)
T ss_dssp EEEEEEECSCCSCCCCCCEEETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC
T ss_pred ceEEEEECCCCCCcccCCEEECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc
Confidence 56788888763 23445679999999999999999965432 4754332110000 000111 23455689999998
Q ss_pred C-CeEEEEcCCCCc---eeEecCC-CCCcee-EEEEeCCeEEEEEeC-----CCeEEEEecCccceeeeeecc
Q psy2153 80 K-NKIHVVDPKSLK---SFDAHPR-RESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 80 g-nkI~VIn~~Tlk---sf~~~~~-~~~~V~-~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~e~LqdIdIa 141 (325)
. ++|+.||++|.+ +++.... ....++ .-+..+..|++.... +..|+.||++|.+.+..++..
T Consensus 125 ~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 197 (668)
T 1kv9_A 125 LDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTV 197 (668)
T ss_dssp TTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred CCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEeccc
Confidence 5 679999999984 2333211 111121 223456678876654 578999999999999999864
No 170
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.98 E-value=0.27 Score=42.80 Aligned_cols=113 Identities=8% Similarity=0.076 Sum_probs=72.6
Q ss_pred CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC--CeEEEEcCCCCc---eeEecC
Q psy2153 26 GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKSLK---SFDAHP 98 (325)
Q Consensus 26 ~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g--nkI~VIn~~Tlk---sf~~~~ 98 (325)
+.++++-.+|+|.+|+.... +..+.+.++.....++++..-. +.+|+++. ++|+++|..+.+ .+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-----AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-----EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECCCC-----cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC
Confidence 45778888999999985331 1224456654111345555443 47888775 479999998873 333321
Q ss_pred C--CCCceeEEEEeCCe--EEEEEe-----------CCCeEEEEecCccceeeeeecchh
Q psy2153 99 R--RESQVRQMTWAGDG--VWVSIR-----------LDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 99 ~--~~~~V~~Ma~~G~G--VWiS~~-----------~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
. ....+..++.+.+| +|++-. .+..|++||..+.+.++.+.....
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 136 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ 136 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC
Confidence 0 01256678887555 666642 468999999999999888876543
No 171
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.92 E-value=0.73 Score=41.00 Aligned_cols=68 Identities=15% Similarity=0.149 Sum_probs=47.9
Q ss_pred CEEEEEE--CCeEEEEcC--CCC-----ceeEecCCCCCceeEEEEeCC-eEEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 73 NKVWCGY--KNKIHVVDP--KSL-----KSFDAHPRRESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 73 ~~LW~g~--gnkI~VIn~--~Tl-----ksf~~~~~~~~~V~~Ma~~G~-GVWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
+.||++. .++|++++. ++. +.|............|+.+.+ .+|++...+..|..||.+|.+.++.|.+
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 4687665 467999874 343 223222222356778888754 5999999999999999999998888754
No 172
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=94.90 E-value=0.31 Score=46.11 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=50.8
Q ss_pred CCEEEEEEC-----------CeEEEEcCCCCc---eeEecCCCCCceeEEEEeCCe--EEEEEe-CCCeEEEEecCccce
Q psy2153 72 YNKVWCGYK-----------NKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH 134 (325)
Q Consensus 72 ~~~LW~g~g-----------nkI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~G--VWiS~~-~ss~IrL~ha~T~e~ 134 (325)
+++||++.. |.|.|||++|++ .+.+. .....|+.+.+| .|++.+ .+..|.+||+.|.|.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g----~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC----CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 479999864 579999999983 44432 246778887554 677777 589999999999999
Q ss_pred eee-eecch
Q psy2153 135 LQD-VDIEP 142 (325)
Q Consensus 135 Lqd-IdIa~ 142 (325)
+.. +.+-.
T Consensus 354 v~~i~~vG~ 362 (373)
T 2mad_H 354 DQSTVELGS 362 (373)
T ss_pred EeeecCCCC
Confidence 988 45543
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.89 E-value=0.49 Score=41.98 Aligned_cols=109 Identities=9% Similarity=0.032 Sum_probs=70.4
Q ss_pred CCceeeeEEe-CCeEEEEecCC-----cEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEEC-------
Q psy2153 15 LDTALPPVHV-QGRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------- 80 (325)
Q Consensus 15 ~dsVl~I~~~-~~~VfVgLANG-----tLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~g------- 80 (325)
+..|.+|... ++++||+..++ .|.+|+.+.... ...+.-..+...+..+..- ++++|++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL-----QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC-----EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEE-----EEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 4678888875 67899987654 788887433211 0122211122456666554 478999876
Q ss_pred -CeEEEEcCCCC--ceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCc
Q psy2153 81 -NKIHVVDPKSL--KSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 81 -nkI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T 131 (325)
+.|+.+++++. +.+... ...+..++.+.+ .+|++-..+..|++||..+
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 46999998764 333221 234677888755 4899888888999999864
No 174
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.87 E-value=0.26 Score=50.61 Aligned_cols=136 Identities=15% Similarity=0.090 Sum_probs=86.3
Q ss_pred CCccceeeCCCc---eeeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCC--CCCce-eeeeeeCCEEEEE
Q psy2153 6 PTPYPLNKILDT---ALPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGL--PHHSV-RSLAAVYNKVWCG 78 (325)
Q Consensus 6 ~~~L~~IkL~ds---Vl~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~--~~~PV-~cml~v~~~LW~g 78 (325)
.+.+|+.++++. ...-+..+++||++..+|.|..++...+. .|..+......... ...++ +.....+++|+++
T Consensus 48 l~~~W~~~~~~~~~~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~ 127 (689)
T 1yiq_A 48 LGLAWSYKLDLDRGVEATPIVVDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVG 127 (689)
T ss_dssp EEEEEEEECSSCSCCCCCCEEETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEE
T ss_pred ceEEEEEECCCCCCceecCEEECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEE
Confidence 367888888753 23445679999999999999999965432 47543211100000 00011 2345678999999
Q ss_pred EC-CeEEEEcCCCCc---eeEec--CCCCCcee-EEEEeCCeEEEEEeC-----CCeEEEEecCccceeeeeecc
Q psy2153 79 YK-NKIHVVDPKSLK---SFDAH--PRRESQVR-QMTWAGDGVWVSIRL-----DSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 79 ~g-nkI~VIn~~Tlk---sf~~~--~~~~~~V~-~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~e~LqdIdIa 141 (325)
+. ++|+.||++|.+ +++.. ......++ .-++.+..|++.... +..|+.||++|.+.+..++..
T Consensus 128 ~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~ 202 (689)
T 1yiq_A 128 VLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTV 202 (689)
T ss_dssp CTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESS
T ss_pred ccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEeccc
Confidence 85 679999999984 23332 11111222 223356678776543 678999999999999998853
No 175
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.86 E-value=0.27 Score=47.20 Aligned_cols=119 Identities=19% Similarity=0.193 Sum_probs=79.1
Q ss_pred CccceeeC----CCceeeeEEeC---CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEE
Q psy2153 7 TPYPLNKI----LDTALPPVHVQ---GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWC 77 (325)
Q Consensus 7 ~~L~~IkL----~dsVl~I~~~~---~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~ 77 (325)
+++..+++ .+.|.++.+.. +.+..+-.||+|.+|+-... ....-..+. ..+|+|+... ++.|.+
T Consensus 137 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~------~~~~~~~~~-~~~v~~v~wspdg~~las 209 (434)
T 2oit_A 137 RPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET------VKVCATLPS-TVAVTSVCWSPKGKQLAV 209 (434)
T ss_dssp CCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS------EEEEEEECG-GGCEEEEEECTTSSCEEE
T ss_pred ceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC------cceeeccCC-CCceeEEEEcCCCCEEEE
Confidence 44455665 67999999974 34666889999999985432 111122332 3689988766 467888
Q ss_pred EECC-eEEEEcCCCC--ceeEecCCC----CCceeEEEEeCCeEEEEEeC--------CCeEEEEecCcc
Q psy2153 78 GYKN-KIHVVDPKSL--KSFDAHPRR----ESQVRQMTWAGDGVWVSIRL--------DSTLRMYNAHTY 132 (325)
Q Consensus 78 g~gn-kI~VIn~~Tl--ksf~~~~~~----~~~V~~Ma~~G~GVWiS~~~--------ss~IrL~ha~T~ 132 (325)
|+.+ +|.++|++.. +.+..+... ...|..+.+.+.+.++.... ...+++||..+.
T Consensus 210 gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 210 GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 8886 5999999822 344444332 23789999999998884432 234899997754
No 176
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.73 E-value=0.19 Score=49.39 Aligned_cols=109 Identities=8% Similarity=-0.016 Sum_probs=77.9
Q ss_pred eCCeEEEEecC-----CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE-----------CCeEEE
Q psy2153 24 VQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (325)
Q Consensus 24 ~~~~VfVgLAN-----GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~-----------gnkI~V 85 (325)
..+++||+-.+ |+|.||+-.. .+.-..|++|. .| .+..- +.+||++. .|.|.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t-----~~vv~~I~vG~--~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv 153 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST-----GRILGMTDGGF--LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEV 153 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT-----TEEEEEEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC-----CEEEEEEECCC--CC--ceEECCCCCEEEEEeccccccccCCCCCEEEE
Confidence 55789998774 6999998322 23446789998 68 55544 36899987 467999
Q ss_pred EcCCCC---ceeEec-CCC---CCceeEEEEe--CCeEEEEEeC-CCeEEEEecCccceeeeeecc
Q psy2153 86 VDPKSL---KSFDAH-PRR---ESQVRQMTWA--GDGVWVSIRL-DSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 86 In~~Tl---ksf~~~-~~~---~~~V~~Ma~~--G~GVWiS~~~-ss~IrL~ha~T~e~LqdIdIa 141 (325)
||+.|+ +.+.+. ... ......|+.+ |..+|++-.. +..|-++|..|.+.+.+|++.
T Consensus 154 iD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 154 FDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 999999 345543 111 1234456665 4558887654 788999999999999999984
No 177
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.70 E-value=0.31 Score=42.58 Aligned_cols=100 Identities=7% Similarity=0.090 Sum_probs=62.7
Q ss_pred eEEEEe-cCCcEEEEEcCCCCCCCCCCCeE-EEcCCCC-Cceeeeeee-CCEEEEEE--CCeEEEEcCCCCc---eeEec
Q psy2153 27 RVVCAL-ADGSVAIFRRGPDGQWDLSKYHT-VTLGLPH-HSVRSLAAV-YNKVWCGY--KNKIHVVDPKSLK---SFDAH 97 (325)
Q Consensus 27 ~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~-I~LG~~~-~PV~cml~v-~~~LW~g~--gnkI~VIn~~Tlk---sf~~~ 97 (325)
++|++- .++.|.+|+.+.+|.+ ...+. ..+.... .....|..- ++++|++. .+.|+++++++.+ .+..+
T Consensus 189 ~l~v~~~~~~~i~~~~~~~~g~~--~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 266 (314)
T 1pjx_A 189 QLIVAETPTKKLWSYDIKGPAKI--ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP 266 (314)
T ss_dssp EEEEEETTTTEEEEEEEEETTEE--EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS
T ss_pred EEEEEECCCCeEEEEECCCCCcc--ccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC
Confidence 578874 5788999985433321 11111 2232111 223455443 47999996 4679999998653 33332
Q ss_pred CCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCc
Q psy2153 98 PRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 98 ~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T 131 (325)
...+..++.+.+| +|++-..+..|..|+.++
T Consensus 267 ---~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 267 ---FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp ---SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred ---CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 3678888875443 999988888899998765
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.35 E-value=0.94 Score=40.10 Aligned_cols=109 Identities=6% Similarity=0.025 Sum_probs=68.6
Q ss_pred eeeeEEe-CCeEEE-EecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEEC------CeEEEEcC
Q psy2153 18 ALPPVHV-QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------NKIHVVDP 88 (325)
Q Consensus 18 Vl~I~~~-~~~VfV-gLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~g------nkI~VIn~ 88 (325)
+.++.+. ++++|+ +..+|.|.+|+... +. ...+.... ...+.+|..- ++++|++.. +.|+++++
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~-~~-----~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPET-KE-----IKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTT-CC-----EEEEEECS-SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCC-Cc-----EEEEeeCC-CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 4555553 567875 57788898887533 21 12222121 2457777665 568999875 37999998
Q ss_pred CCCce--eEecCCCCCceeEEEEeCCe-EEEEEeC------CCeEEEEecCccc
Q psy2153 89 KSLKS--FDAHPRRESQVRQMTWAGDG-VWVSIRL------DSTLRMYNAHTYQ 133 (325)
Q Consensus 89 ~Tlks--f~~~~~~~~~V~~Ma~~G~G-VWiS~~~------ss~IrL~ha~T~e 133 (325)
++.+. +.........+..++.+.+| +|++-.. ...|..||..+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 88732 22222344678888888555 8988764 3568888876543
No 179
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=94.23 E-value=1.5 Score=38.16 Aligned_cols=106 Identities=9% Similarity=0.041 Sum_probs=67.2
Q ss_pred CceeeeEEe-C-CeEEEEecCCcEEEEEcCCCCCCCCCCCeEE--Ec--CCCCCceeeeeee-CCEEEEEEC--------
Q psy2153 16 DTALPPVHV-Q-GRVVCALADGSVAIFRRGPDGQWDLSKYHTV--TL--GLPHHSVRSLAAV-YNKVWCGYK-------- 80 (325)
Q Consensus 16 dsVl~I~~~-~-~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I--~L--G~~~~PV~cml~v-~~~LW~g~g-------- 80 (325)
..+.+|... + +++|++..++.|.+|+.+ |... .+ .. +.+...++++..- ++++|++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~--g~~~-----~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD--GTFE-----EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETT--SCEE-----ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCC--CCEE-----EEEeccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 567777775 4 689999887789899854 3211 11 00 1112335566554 478999885
Q ss_pred ---------CeEEEEcCCCCceeEecCCCCCceeEEEEe----CCe--EEEEEeCCCeEEEEecC
Q psy2153 81 ---------NKIHVVDPKSLKSFDAHPRRESQVRQMTWA----GDG--VWVSIRLDSTLRMYNAH 130 (325)
Q Consensus 81 ---------nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~----G~G--VWiS~~~ss~IrL~ha~ 130 (325)
+.|+.++++ . .+............++.+ .+| +|++-..+..|+.||..
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g-~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-G-QMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-S-CEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred ccccccCCCCeEEEECCC-C-CEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 479999986 3 222111122345677777 555 89888888899999865
No 180
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.23 E-value=2.1 Score=38.35 Aligned_cols=123 Identities=15% Similarity=0.188 Sum_probs=70.8
Q ss_pred ceeeeEEeCCeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEE-cCCCCC-------ceeeeeeeC--CEEEEEEC--CeE
Q psy2153 17 TALPPVHVQGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVT-LGLPHH-------SVRSLAAVY--NKVWCGYK--NKI 83 (325)
Q Consensus 17 sVl~I~~~~~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~-LG~~~~-------PV~cml~v~--~~LW~g~g--nkI 83 (325)
.+..+....+++|++- .+|++.+|+...++.... ....+. .|.... .+.++.... ..|+++.. ++|
T Consensus 101 ~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 101 DPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLP-ASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp CEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCS-CSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred CcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcc-cceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 4555555444577665 578899999776554221 112222 222001 124454442 45888774 567
Q ss_pred EEEcCCCCc-----e-e-------EecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCcc--ceeeeeec
Q psy2153 84 HVVDPKSLK-----S-F-------DAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTY--QHLQDVDI 140 (325)
Q Consensus 84 ~VIn~~Tlk-----s-f-------~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~--e~LqdIdI 140 (325)
.+++..... . + .........+++++.+.+| +|++-..+..|++|+..+. +.++.+..
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~ 253 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA 253 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec
Confidence 777544321 1 2 2222345668899998665 7887778999999998754 34555543
No 181
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=93.94 E-value=0.76 Score=43.40 Aligned_cols=108 Identities=10% Similarity=0.034 Sum_probs=70.7
Q ss_pred CCeEEEEec--CC---cEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE-----------CCeEEEE
Q psy2153 25 QGRVVCALA--DG---SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHVV 86 (325)
Q Consensus 25 ~~~VfVgLA--NG---tLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~-----------gnkI~VI 86 (325)
..++||.=. .+ +|.||+.... +....|+.|. .| .+... +..||++. .|.|.+|
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~~t~-----~~~~~i~~g~--~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDAGSG-----SILGHVNGGF--LP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEECCCC-----eEEEEecCCC--CC--CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 356777642 22 7888885432 2235677786 56 44444 46899986 4779999
Q ss_pred cCCCCc---eeEec-C-C--CCCceeEEEEe--CCeEEEEEeC-CCeEEEEecCccceeee-eecch
Q psy2153 87 DPKSLK---SFDAH-P-R--RESQVRQMTWA--GDGVWVSIRL-DSTLRMYNAHTYQHLQD-VDIEP 142 (325)
Q Consensus 87 n~~Tlk---sf~~~-~-~--~~~~V~~Ma~~--G~GVWiS~~~-ss~IrL~ha~T~e~Lqd-IdIa~ 142 (325)
|+.|++ .+.+. . + ....-..|+.+ |.-+|++-.. +..|.++| +|.+.+.+ |++..
T Consensus 103 D~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~ 168 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT 168 (373)
T ss_pred ECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc
Confidence 999983 33332 1 0 01234567775 5557877654 68899999 99999999 88753
No 182
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.88 E-value=1.1 Score=46.08 Aligned_cols=110 Identities=10% Similarity=0.089 Sum_probs=76.7
Q ss_pred ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCC-----eEEEcCC--CCCceeeeeeeCCEEEEEECCe-EEEE
Q psy2153 17 TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKY-----HTVTLGL--PHHSVRSLAAVYNKVWCGYKNK-IHVV 86 (325)
Q Consensus 17 sVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~-----~~I~LG~--~~~PV~cml~v~~~LW~g~gnk-I~VI 86 (325)
+|.++.+. .+.+++|-.||+|-+|+.... .+.++ +.+..+. ....|.++....|.+-+++.++ |++.
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~---~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlW 207 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKN---SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSM 207 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCC---TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCC---ccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEE
Confidence 59999986 557999999999999996542 23333 3444332 1368999988876666666644 9999
Q ss_pred cCCCCce------eE-ecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccce
Q psy2153 87 DPKSLKS------FD-AHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 87 n~~Tlks------f~-~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~ 134 (325)
+..+.+. +. .| ...|..++.+|. +++...+.+|+|||..+.+.
T Consensus 208 d~~~~~~~~~~~tL~~~h---~~~V~svaFsg~--~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNAS---RRKITDLKIVDY--KVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp CCCSSSSCCCEEEEECCC---SSCCCCEEEETT--EEEEECSSEEEEEETTTTEE
T ss_pred ECCCCccccceeeecccc---cCcEEEEEEECC--EEEEEeCCeEEEEECCCCeE
Confidence 9877631 32 33 377888888853 33444478999999998776
No 183
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=93.83 E-value=2.7 Score=36.44 Aligned_cols=117 Identities=7% Similarity=-0.011 Sum_probs=76.2
Q ss_pred ceeeeEEe--CCeEEEEecC---CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEEC--CeEEEEc
Q psy2153 17 TALPPVHV--QGRVVCALAD---GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVD 87 (325)
Q Consensus 17 sVl~I~~~--~~~VfVgLAN---GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~g--nkI~VIn 87 (325)
....|... ++++|++-.. ++|.+|.. +|. ..+.+.-.....| +.|..- +++||++.. ++|++++
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~--dg~----~~~~~~~~~~~~P-~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHM--DGT----NRRILAQDNLGLP-NGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEET--TSC----CCEEEECTTCSCE-EEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEec--CCC----CcEEEEECCCCCC-cEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 34555554 5789988753 67888874 332 2233321111233 344433 478988876 6799999
Q ss_pred CCCCceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 88 PKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 88 ~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
..+.+....-. .......|+..+..+|++-..+..|+.+|..+.+.+..|.+.
T Consensus 196 ~~g~~~~~~~~-~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 196 PAQPGRRKVLE-GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp TTEEEEEEEEE-CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred cCCCceEEEec-CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 98752111111 224456778888899999999999999999999999998754
No 184
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=93.80 E-value=3.3 Score=37.65 Aligned_cols=122 Identities=14% Similarity=0.063 Sum_probs=79.1
Q ss_pred CCCccceeeCCCceeeeEEe-CCeEEEEec---CC--cEEEEEcCCCCCCCCCCCeEEEc------CC-CCCceeeeeee
Q psy2153 5 HPTPYPLNKILDTALPPVHV-QGRVVCALA---DG--SVAIFRRGPDGQWDLSKYHTVTL------GL-PHHSVRSLAAV 71 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~-~~~VfVgLA---NG--tLaVF~R~~~g~WD~~~~~~I~L------G~-~~~PV~cml~v 71 (325)
.++.+++.. ..+..|... ++++||+.. +| +|..++ +|. .... +. ....+..+..-
T Consensus 8 ~~~~v~~~~--~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~---~g~-------~~~~p~~~~~~~~~~~~p~gv~~d 75 (343)
T 2qe8_A 8 RLEVVAELS--LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT---QDG-------LIPFPPQSGNAIITFDTVLGIKSD 75 (343)
T ss_dssp CCEEEEEES--SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE---TTE-------EEESCCCCSSCCCCCSCEEEEEEC
T ss_pred eeEEEEEcC--CCcceEEECCCCCEEEEeCCCCCCceEEEEEC---CCC-------eecCCCcccCcccceeEeeEEEEc
Confidence 345566655 677778776 789999964 45 788886 231 1111 10 01234555544
Q ss_pred -CCEEEEEE-------CCeEEEEcCCCC---ceeEecC---CCCCceeEEEEe--CCeEEEEEe---CCCeEEEEecCcc
Q psy2153 72 -YNKVWCGY-------KNKIHVVDPKSL---KSFDAHP---RRESQVRQMTWA--GDGVWVSIR---LDSTLRMYNAHTY 132 (325)
Q Consensus 72 -~~~LW~g~-------gnkI~VIn~~Tl---ksf~~~~---~~~~~V~~Ma~~--G~GVWiS~~---~ss~IrL~ha~T~ 132 (325)
+++||+.- ..+|+++|+++. +.+.... .....+..++.+ +..+|++-. .+..|.+||..+.
T Consensus 76 ~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 76 GNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp SSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred CCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 37899865 468999999876 4454432 123457888888 456888877 7889999999887
Q ss_pred ceeeee
Q psy2153 133 QHLQDV 138 (325)
Q Consensus 133 e~LqdI 138 (325)
+....+
T Consensus 156 ~~~r~~ 161 (343)
T 2qe8_A 156 LAARVL 161 (343)
T ss_dssp CEEEEC
T ss_pred CEEEEe
Confidence 765544
No 185
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=93.70 E-value=0.2 Score=46.64 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=45.7
Q ss_pred CCEEEEEEC------------CeEEEEcCCCCc---eeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecCcc--
Q psy2153 72 YNKVWCGYK------------NKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTY-- 132 (325)
Q Consensus 72 ~~~LW~g~g------------nkI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~-- 132 (325)
++++|++++ +.|.+||++|.+ .+.++. +..|+.+.+ -+|++- ..+|++||+.|.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-----p~~ia~spdg~~l~v~n--~~~v~v~D~~t~~l 337 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-----ALSMTIDQQRNLMLTLD--GGNVNVYDISQPEP 337 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-----CCEEEEETTTTEEEEEC--SSCEEEEECSSSSC
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-----eeEEEECCCCCEEEEeC--CCeEEEEECCCCcc
Confidence 479999864 589999999994 444432 788888744 466544 399999999999
Q ss_pred ceeeee
Q psy2153 133 QHLQDV 138 (325)
Q Consensus 133 e~LqdI 138 (325)
|.++.|
T Consensus 338 ~~~~~i 343 (361)
T 2oiz_A 338 KLLRTI 343 (361)
T ss_dssp EEEEEE
T ss_pred eeeEEe
Confidence 988887
No 186
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=93.52 E-value=0.078 Score=55.94 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=68.2
Q ss_pred CCCceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCeEEEEcCCCCce
Q psy2153 14 ILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLKS 93 (325)
Q Consensus 14 L~dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnkI~VIn~~Tlks 93 (325)
++.+-......++.++|+|.||-|.=++|+.++.|... ...-.+...+++.|.. +. +++
T Consensus 160 ~R~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~---~Fnd~s~l~SL~~lf~-------~~-~~~---------- 218 (729)
T 3f7f_A 160 VRVPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPL---LFNDNSYLKCLTRFFS-------RS-SKS---------- 218 (729)
T ss_dssp TSCEEEEEECSSSBEEEEETTSCEECCEESSSSCEECC---CCCCCGGGGGGSTTCC-------TT-CSS----------
T ss_pred ccCCcEEEEECCCeEEEEEcCCCEEEEEeccCCCccee---eecCCchhhhhHHhhc-------CC-CCC----------
Confidence 34455555667888999999999999999877666221 1222222244555411 10 111
Q ss_pred eEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 94 FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 94 f~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
+.+..|.++......+| ++..+.+||+|+.+|.+++++.|+.
T Consensus 219 -----~~~~~Is~~~~~~~fLf-tL~~Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 219 -----DYDSVISCKLFHERYLI-VLTQNCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp -----CCCCEEEEEEETTTEEE-EEETTCEEEEEETTTTEEEEEEETT
T ss_pred -----CcCceEEEeccCCcEEE-EEEcCCeEEEEEcCCCceEEeeccc
Confidence 22356777777655555 9999999999999999999999993
No 187
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.49 E-value=0.87 Score=40.58 Aligned_cols=120 Identities=14% Similarity=0.156 Sum_probs=69.6
Q ss_pred eeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC--CeEEEEcCCC-
Q psy2153 18 ALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPKS- 90 (325)
Q Consensus 18 Vl~I~~~-~~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g--nkI~VIn~~T- 90 (325)
+.++.+. ++++|++- .+++|.+|+...+|... ....+.+.. ....+.+..-. ..||+++. ++|.+++...
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~--~~~~~~~~~-g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLS--EQSVLTMEA-GFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEE--EEEEEECCT-TCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEE--EeeeEEcCC-CCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 5566664 45577664 46789999876444321 111122221 12344554443 35888764 5677776553
Q ss_pred -Cc-----eeEecCC---CCCceeEEEEeCCe--EEEEEeCCCeEEEEecC---ccceeeeeec
Q psy2153 91 -LK-----SFDAHPR---RESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH---TYQHLQDVDI 140 (325)
Q Consensus 91 -lk-----sf~~~~~---~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~---T~e~LqdIdI 140 (325)
.+ .+...+. ....+..++.+.+| +|++.+.+..|++|+.. +++.++.+..
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence 31 2222221 12567888888555 88888889999999986 4555555544
No 188
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.41 E-value=0.62 Score=44.63 Aligned_cols=70 Identities=11% Similarity=0.038 Sum_probs=54.2
Q ss_pred eeeCCEEEEEEC----------CeEEEEcCCCCc---eeEecCCCCCceeEEEEeCC--eEEEEEe-CCCeEEEEecCcc
Q psy2153 69 AAVYNKVWCGYK----------NKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGD--GVWVSIR-LDSTLRMYNAHTY 132 (325)
Q Consensus 69 l~v~~~LW~g~g----------nkI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~--GVWiS~~-~ss~IrL~ha~T~ 132 (325)
..-++++|++.. +.+.|||+.|++ .+.+.. ....|+.+.+ .+|++.. .+..|.++|+.|.
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 333579998753 468899999994 444443 3667887644 4999999 7999999999999
Q ss_pred ceeeeeecch
Q psy2153 133 QHLQDVDIEP 142 (325)
Q Consensus 133 e~LqdIdIa~ 142 (325)
|.+..|.+-.
T Consensus 348 kvv~~I~vg~ 357 (368)
T 1mda_H 348 QDQSSVELDK 357 (368)
T ss_dssp EEEEECCCCS
T ss_pred cEEEEEECCC
Confidence 9999998764
No 189
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=93.30 E-value=0.61 Score=45.35 Aligned_cols=73 Identities=15% Similarity=0.217 Sum_probs=55.2
Q ss_pred CCEEEEEE-----------CCeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCe---EEEEEeCCCeEEEEecCccce
Q psy2153 72 YNKVWCGY-----------KNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG---VWVSIRLDSTLRMYNAHTYQH 134 (325)
Q Consensus 72 ~~~LW~g~-----------gnkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G---VWiS~~~ss~IrL~ha~T~e~ 134 (325)
++++|++. +|+|.|||++|. +.+.+.. .+..|+.+.+| ++++-..+..|.+||+.|++.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 58999986 378999999999 4555543 45667776554 455566799999999999999
Q ss_pred eeeeecchhhhhhc
Q psy2153 135 LQDVDIEPYVSKML 148 (325)
Q Consensus 135 LqdIdIa~~v~~~l 148 (325)
+..|+.-..-+.|+
T Consensus 367 ~~~i~~~~~p~~l~ 380 (386)
T 3sjl_D 367 LRSVNQLGHGPQVI 380 (386)
T ss_dssp EEEECCCCSSCCEE
T ss_pred EEEecCCCCCceeE
Confidence 99999875544444
No 190
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=93.26 E-value=0.3 Score=47.92 Aligned_cols=67 Identities=13% Similarity=0.259 Sum_probs=50.1
Q ss_pred CCEEEEEEC-----------CeEEEEcCCCC---ceeEecCCCCCceeEEEEeCCe--EEEEEe-CCCeEEEEecCccce
Q psy2153 72 YNKVWCGYK-----------NKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQH 134 (325)
Q Consensus 72 ~~~LW~g~g-----------nkI~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~-~ss~IrL~ha~T~e~ 134 (325)
+++||++.+ |.|.|||+.|+ +.+.+.. ....|+.+.+| .|++.+ .+..|.++|+.|++.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 489999863 57999999999 4555543 35567776433 566666 699999999999999
Q ss_pred eeee-ecch
Q psy2153 135 LQDV-DIEP 142 (325)
Q Consensus 135 LqdI-dIa~ 142 (325)
+..| .+-.
T Consensus 406 v~tI~~vG~ 414 (426)
T 3c75_H 406 LRSVDQLGR 414 (426)
T ss_dssp EEEECCCSS
T ss_pred EEEecCCCC
Confidence 9998 4443
No 191
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.18 E-value=3.3 Score=34.61 Aligned_cols=112 Identities=12% Similarity=0.040 Sum_probs=68.7
Q ss_pred eeeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEE-----CCe
Q psy2153 11 LNKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGY-----KNK 82 (325)
Q Consensus 11 ~IkL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~-----gnk 82 (325)
....++.|.++.+. +++.++...+|.|.+|+....+. ...+.-+.....+.++.... ..|.+++ ..+
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPS-----PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCS-----CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCC-----ceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 34456778888876 45556666789999988543121 12222232235677766653 4677777 367
Q ss_pred EEEEcCCCCceeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEec
Q psy2153 83 IHVVDPKSLKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA 129 (325)
Q Consensus 83 I~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha 129 (325)
|++++..+.+....... ..+..++++.+| +.++...+..+++|+.
T Consensus 112 l~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~l~~~ 158 (297)
T 2ojh_A 112 IYLLPSTGGTPRLMTKN--LPSYWHGWSPDGKSFTYCGIRDQVFDIYSM 158 (297)
T ss_dssp EEEEETTCCCCEECCSS--SSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCceEEeecC--CCccceEECCCCCEEEEEECCCCceEEEEE
Confidence 99998877643222221 237778887555 5556667888888874
No 192
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.09 E-value=1.6 Score=40.75 Aligned_cols=104 Identities=11% Similarity=0.165 Sum_probs=59.6
Q ss_pred CCeEEEEecCCcEEEEEcCCC-CCCCCCCCeEEEcCCCCCceeeeeee---CCEEEEEECC-----eEEEEcCCCCceeE
Q psy2153 25 QGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAV---YNKVWCGYKN-----KIHVVDPKSLKSFD 95 (325)
Q Consensus 25 ~~~VfVgLANGtLaVF~R~~~-g~WD~~~~~~I~LG~~~~PV~cml~v---~~~LW~g~gn-----kI~VIn~~Tlksf~ 95 (325)
+++||||..+| |.+|+.+.. ..|.... ..+. ...|++|..- .+.||++... .|+.-+ ...++|+
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~---~~~~--~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~ 94 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRG---PVFL--GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWT 94 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEE---EEST--TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCE
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECC---ccCC--CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCce
Confidence 57899999988 777776432 3675311 1222 3578888776 5799999765 365543 2223332
Q ss_pred ecCC--------------CCCceeEEEEe----CCeEEEEEeCCCeEEEEec-Ccccee
Q psy2153 96 AHPR--------------RESQVRQMTWA----GDGVWVSIRLDSTLRMYNA-HTYQHL 135 (325)
Q Consensus 96 ~~~~--------------~~~~V~~Ma~~----G~GVWiS~~~ss~IrL~ha-~T~e~L 135 (325)
.... ....|..++.. ...+|+....+...|.=|. +|.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~ 153 (394)
T 3b7f_A 95 EATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPV 153 (394)
T ss_dssp ECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEEC
T ss_pred ECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEEC
Confidence 2111 11257777775 5668887665544443332 344443
No 193
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.96 E-value=1.3 Score=44.58 Aligned_cols=129 Identities=13% Similarity=0.054 Sum_probs=81.0
Q ss_pred CCccceeeCCCce-----eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCCCCC------c-eeeeeeeC
Q psy2153 6 PTPYPLNKILDTA-----LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHH------S-VRSLAAVY 72 (325)
Q Consensus 6 ~~~L~~IkL~dsV-----l~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~~~~------P-V~cml~v~ 72 (325)
-+++|+.++++.+ ..-+..+++||++..++.|..++...+. .|..+ ++.+.. + -+.....+
T Consensus 44 ~~~~W~~~~~~~~~~g~~~~P~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~------~~~~~~~~~~~~~~~~g~a~~~ 117 (582)
T 1flg_A 44 LTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYN------HRLPDDIRPCCDVVNRGAAIYG 117 (582)
T ss_dssp CEEEEEEECCTTCCSCCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEE------CCCCTTCCCSSCSCCCCCEEET
T ss_pred CcEEEEEECCCccCCcceeccEEECCEEEEEcCCCCEEEEECCCCcEEEEEc------CCCCcccccccccCCCccEEEC
Confidence 4678999998643 3445689999999996668888864432 36432 222110 0 13345678
Q ss_pred CEEEEEEC-CeEEEEcCCCCce---eEecCCC-CCcee-EEEEeCC------eEEEEEe-----CCCeEEEEecCcccee
Q psy2153 73 NKVWCGYK-NKIHVVDPKSLKS---FDAHPRR-ESQVR-QMTWAGD------GVWVSIR-----LDSTLRMYNAHTYQHL 135 (325)
Q Consensus 73 ~~LW~g~g-nkI~VIn~~Tlks---f~~~~~~-~~~V~-~Ma~~G~------GVWiS~~-----~ss~IrL~ha~T~e~L 135 (325)
++|++++. ++++.||++|.+. +...... ...++ .-+..+. -|++... .+..|+.||++|.+.+
T Consensus 118 ~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~ 197 (582)
T 1flg_A 118 DKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEI 197 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEE
Confidence 99999985 6799999999842 2322210 11121 1122333 5666543 3678999999999999
Q ss_pred eeeec
Q psy2153 136 QDVDI 140 (325)
Q Consensus 136 qdIdI 140 (325)
.....
T Consensus 198 W~~~~ 202 (582)
T 1flg_A 198 WMRPF 202 (582)
T ss_dssp EEEES
T ss_pred eecCC
Confidence 87664
No 194
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.79 E-value=2.4 Score=38.01 Aligned_cols=122 Identities=10% Similarity=0.073 Sum_probs=71.6
Q ss_pred eeeeEEe-CC-eEEEEe-cCCcEEEEEcCCCCC---CC-CCC---CeEEEcCCCCCceeeeeeeC--CEEEEEE--CCeE
Q psy2153 18 ALPPVHV-QG-RVVCAL-ADGSVAIFRRGPDGQ---WD-LSK---YHTVTLGLPHHSVRSLAAVY--NKVWCGY--KNKI 83 (325)
Q Consensus 18 Vl~I~~~-~~-~VfVgL-ANGtLaVF~R~~~g~---WD-~~~---~~~I~LG~~~~PV~cml~v~--~~LW~g~--gnkI 83 (325)
+.++.+. ++ ++|++- .++++.+|+-+..+. .. +.. ...+.+.. ....+.+..-. ..||+++ .++|
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-GSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-CCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 3556664 34 476654 478999998654331 00 111 02333332 22345665553 3699988 4779
Q ss_pred EEEcCCCC-----ceeEecCCCCCceeEEEEeCCe--EEEEEeC-CCeEEEEecC----ccceeeeeec
Q psy2153 84 HVVDPKSL-----KSFDAHPRRESQVRQMTWAGDG--VWVSIRL-DSTLRMYNAH----TYQHLQDVDI 140 (325)
Q Consensus 84 ~VIn~~Tl-----ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~-ss~IrL~ha~----T~e~LqdIdI 140 (325)
.+++..+. +.+...+........++.+.+| +|++-+. +..|++|+.. +++.++.+..
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT 304 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC
Confidence 99997654 2233333334556788887555 7777777 7899999875 3345555543
No 195
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.43 E-value=2.2 Score=43.71 Aligned_cols=131 Identities=15% Similarity=0.232 Sum_probs=82.8
Q ss_pred CCccceeeCC-C-----ce-eeeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCCCeEEEcCCCC--Cc-----
Q psy2153 6 PTPYPLNKIL-D-----TA-LPPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HS----- 64 (325)
Q Consensus 6 ~~~L~~IkL~-d-----sV-l~I~~~~~~VfVgLA------NGtLaVF~R~~~g-~WD~~~~~~I~LG~~~--~P----- 64 (325)
=|.+|+.++. + .+ ...+..+++||++.. +|.|..|+...+. .|..+ .+.+. .|
T Consensus 148 G~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~------~~~~~~~~~~~~~~ 221 (677)
T 1kb0_A 148 GKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF------SVPGDPSKPFEDES 221 (677)
T ss_dssp CCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE------SSCCCTTSCCSSHH
T ss_pred CCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec------cCCCCccccccccc
Confidence 3677888876 3 23 234456899999986 6899999965433 36432 11100 00
Q ss_pred -----------------------eeeee--eeCCEEEEEECC--------------------eEEEEcCCCCc---eeEe
Q psy2153 65 -----------------------VRSLA--AVYNKVWCGYKN--------------------KIHVVDPKSLK---SFDA 96 (325)
Q Consensus 65 -----------------------V~cml--~v~~~LW~g~gn--------------------kI~VIn~~Tlk---sf~~ 96 (325)
...+. ...+.|+++.+| .|+.||++|.+ .|+.
T Consensus 222 ~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~ 301 (677)
T 1kb0_A 222 MKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE 301 (677)
T ss_dssp HHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred cccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec
Confidence 11222 236899999887 49999999983 3443
Q ss_pred cCCC------CC--ceeEEEEeCC--eEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 97 HPRR------ES--QVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 97 ~~~~------~~--~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
.+.. .. .+..+...|. .+.+....+..|+++|.+|.|.+..+.+.+
T Consensus 302 ~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~ 357 (677)
T 1kb0_A 302 TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVP 357 (677)
T ss_dssp STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC
T ss_pred CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccc
Confidence 2210 11 1122223343 577788889999999999999999887654
No 196
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.38 E-value=0.91 Score=41.23 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=68.3
Q ss_pred cceeeCCCceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE-Ec--CCCCCceeeeeee-CCEEEEEEC---
Q psy2153 9 YPLNKILDTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TL--GLPHHSVRSLAAV-YNKVWCGYK--- 80 (325)
Q Consensus 9 L~~IkL~dsVl~I~~-~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I-~L--G~~~~PV~cml~v-~~~LW~g~g--- 80 (325)
...+.++..|.+|.. .++++||+..+| |.+|+... |.. ..+ .. +.+...++.+..- ++++|++..
T Consensus 83 ~~~~~~~~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~-g~~-----~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~ 155 (326)
T 2ghs_A 83 KTVHALPFMGSALAKISDSKQLIASDDG-LFLRDTAT-GVL-----TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK 155 (326)
T ss_dssp EEEEECSSCEEEEEEEETTEEEEEETTE-EEEEETTT-CCE-----EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT
T ss_pred EEEEECCCcceEEEEeCCCeEEEEECCC-EEEEECCC-CcE-----EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc
Confidence 445567788888886 478999998665 88887432 221 112 11 1111235555443 468999874
Q ss_pred -----CeEEEEcCCCCceeEecCCCCCceeEEEEeCC--eEEEEEeCCCeEEEEecC
Q psy2153 81 -----NKIHVVDPKSLKSFDAHPRRESQVRQMTWAGD--GVWVSIRLDSTLRMYNAH 130 (325)
Q Consensus 81 -----nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~--GVWiS~~~ss~IrL~ha~ 130 (325)
+.|+.++....+.+.. .....+.++++.+ .+|++-.....|.+|+..
T Consensus 156 ~~~~~~~l~~~~~g~~~~~~~---~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 156 AETGAGSIYHVAKGKVTKLFA---DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp CCTTCEEEEEEETTEEEEEEE---EESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCCceEEEEEeCCcEEEeeC---CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 4799999211122221 1234567777744 488887778889999864
No 197
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.38 E-value=1.2 Score=45.39 Aligned_cols=135 Identities=12% Similarity=0.061 Sum_probs=84.8
Q ss_pred CCccceeeCCCc---eeeeEEeCCeEEEEec-CCcEEEEEc-CCCC-CCCCCCCeEEEcCCCCCc-------eeeeee--
Q psy2153 6 PTPYPLNKILDT---ALPPVHVQGRVVCALA-DGSVAIFRR-GPDG-QWDLSKYHTVTLGLPHHS-------VRSLAA-- 70 (325)
Q Consensus 6 ~~~L~~IkL~ds---Vl~I~~~~~~VfVgLA-NGtLaVF~R-~~~g-~WD~~~~~~I~LG~~~~P-------V~cml~-- 70 (325)
.+++|+.++++. -..-+..+++||++.. +|.|..++. ..+. .|..+..... . ..| -+....
T Consensus 40 l~~~W~~~~g~~~g~~~tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~--~--~~~~~~~~~~~~g~av~p 115 (599)
T 1w6s_A 40 LRPAWTFSTGLLNGHEGAPLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNP--A--ARAVACCDLVNRGLAYWP 115 (599)
T ss_dssp EEEEEEEECSCCSCCCSCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCG--G--GGGGCSSCSCCCCCEEEC
T ss_pred CcEEEEEECCCCCCceeccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCc--c--ccccccccccccceEEEe
Confidence 366888888742 2344567999999999 899999997 4322 4754322100 0 011 122334
Q ss_pred eCCE----EEEEEC-CeEEEEcCCCCce-eEecCC---CCCcee-EEEEeCCeEEEEEe-----CCCeEEEEecCcccee
Q psy2153 71 VYNK----VWCGYK-NKIHVVDPKSLKS-FDAHPR---RESQVR-QMTWAGDGVWVSIR-----LDSTLRMYNAHTYQHL 135 (325)
Q Consensus 71 v~~~----LW~g~g-nkI~VIn~~Tlks-f~~~~~---~~~~V~-~Ma~~G~GVWiS~~-----~ss~IrL~ha~T~e~L 135 (325)
.+++ |++++. ++++.||++|.+. .+.... ....++ .-+..+.-|++... .+..|+.||++|.+.+
T Consensus 116 ~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 116 GDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp CCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred cCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEE
Confidence 4677 999976 6799999999842 222111 011222 22334556776654 3689999999999999
Q ss_pred eeeecchhh
Q psy2153 136 QDVDIEPYV 144 (325)
Q Consensus 136 qdIdIa~~v 144 (325)
..++..+..
T Consensus 196 W~~~~~~~~ 204 (599)
T 1w6s_A 196 WRAYATGPD 204 (599)
T ss_dssp EEEESSSCH
T ss_pred EEEcCCCCc
Confidence 999987644
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.26 E-value=1.2 Score=39.56 Aligned_cols=114 Identities=7% Similarity=0.030 Sum_probs=69.2
Q ss_pred CccceeeCCCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEc--CCCCCceeeeeee-CCEEEEEEC--
Q psy2153 7 TPYPLNKILDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTL--GLPHHSVRSLAAV-YNKVWCGYK-- 80 (325)
Q Consensus 7 ~~L~~IkL~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~L--G~~~~PV~cml~v-~~~LW~g~g-- 80 (325)
+.+..+.++..+.+|... ++++||+. ++.|.+|+.+. |.+. ..... +.+...+..+..- ++++|++..
T Consensus 45 ~~~~~~~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~-g~~~----~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~ 118 (297)
T 3g4e_A 45 KQVQRVTMDAPVSSVALRQSGGYVATI-GTKFCALNWKE-QSAV----VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAE 118 (297)
T ss_dssp CCEEEEECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTT-TEEE----EEEECCTTCSSEEEEEEEECTTSCEEEEEEEC
T ss_pred CcEEEEeCCCceEEEEECCCCCEEEEE-CCeEEEEECCC-CcEE----EEEecCCCCCCCCCCCEEECCCCCEEEecCCc
Confidence 344566778888888875 67899997 56788888543 2210 11122 1122234454443 478999872
Q ss_pred -----------CeEEEEcCCCC-ceeEecCCCCCceeEEEEeC--CeEEEEEeCCCeEEEEec
Q psy2153 81 -----------NKIHVVDPKSL-KSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNA 129 (325)
Q Consensus 81 -----------nkI~VIn~~Tl-ksf~~~~~~~~~V~~Ma~~G--~GVWiS~~~ss~IrL~ha 129 (325)
++|+.+++... ..+. ......+.++++. ..+|++-.....|..|+.
T Consensus 119 ~~~~~~~~~~~~~l~~~d~~g~~~~~~---~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 119 ETAPAVLERHQGALYSLFPDHHVKKYF---DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp CSBTTBCCTTCEEEEEECTTSCEEEEE---EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred ccccccccCCCcEEEEEECCCCEEEEe---eccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 36999987632 2211 1123456778764 448888887888888875
No 199
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.23 E-value=0.86 Score=42.27 Aligned_cols=106 Identities=9% Similarity=0.122 Sum_probs=63.9
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCCCeEEE-c-CCCCCceeeeeee---------CCEEEEEE-CC-eEEEEcCCCCc--
Q psy2153 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVT-L-GLPHHSVRSLAAV---------YNKVWCGY-KN-KIHVVDPKSLK-- 92 (325)
Q Consensus 28 VfVgLANGtLaVF~R~~~g~WD~~~~~~I~-L-G~~~~PV~cml~v---------~~~LW~g~-gn-kI~VIn~~Tlk-- 92 (325)
+..|-.|++|-+++..... ....+.+. + |. ..+|.++... ++++-+.+ .+ .|.|.|.++.+
T Consensus 104 las~~~d~~v~lw~~~~~~---~~~~~~~~~~~gH-~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNET---IITQHVLGGKSGH-HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEETTSCEEEEEEETTE---EEEEEEECTTTSC-SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred EEEEeCCCcEEEEECCCCc---cceeeeecccCCC-CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 4556668888888743321 00111111 1 22 3789888764 45665544 43 49999987762
Q ss_pred -eeEecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCccceeeeeec
Q psy2153 93 -SFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDI 140 (325)
Q Consensus 93 -sf~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T~e~LqdIdI 140 (325)
.+..|+ ..|..++....+ .-++...+.+||+||..+.+...+..-
T Consensus 180 ~~~~~~~---~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 180 LAGYPLS---SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp EEEEECS---SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred eeecCCC---CCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 333444 678888888654 677888999999999999887766554
No 200
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.72 E-value=5.3 Score=35.37 Aligned_cols=124 Identities=16% Similarity=0.127 Sum_probs=73.5
Q ss_pred CCceeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEc-CC-C-----CCceeeeeee-CCEEEEEEC--C
Q psy2153 15 LDTALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL-GL-P-----HHSVRSLAAV-YNKVWCGYK--N 81 (325)
Q Consensus 15 ~dsVl~I~~~~--~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~L-G~-~-----~~PV~cml~v-~~~LW~g~g--n 81 (325)
...+..|.... +++|++- .+|++.+|+.+.+|.. .....+.. |. | ...+.++..- ++++|++.. +
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL--TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE--EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe--eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 34566666653 3588777 6789999987655532 11122222 11 0 0125565554 356888764 5
Q ss_pred eEEEEcCCC-C--cee-EecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecCc----cceeeeeec
Q psy2153 82 KIHVVDPKS-L--KSF-DAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHT----YQHLQDVDI 140 (325)
Q Consensus 82 kI~VIn~~T-l--ksf-~~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~T----~e~LqdIdI 140 (325)
+|++++.+. . ... .........+++++.+.+| +|++-..+..|++|+... ++.++.+..
T Consensus 163 ~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~ 231 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT 231 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee
Confidence 799998773 2 211 1122234567888988555 888888899999998663 334555443
No 201
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.38 E-value=5.6 Score=35.70 Aligned_cols=109 Identities=13% Similarity=0.174 Sum_probs=66.7
Q ss_pred eeeeEEe-C-CeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-------CCEEEEEEC--CeEEE
Q psy2153 18 ALPPVHV-Q-GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-------YNKVWCGYK--NKIHV 85 (325)
Q Consensus 18 Vl~I~~~-~-~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-------~~~LW~g~g--nkI~V 85 (325)
+..|... + +++||+- .|++|.+|+.+. |.. ...+........+..+... ++++|++.. ++|++
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~----~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~ 272 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDT-KEF----VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFV 272 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTT-CCE----EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEE
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCC-CcE----EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEE
Confidence 5667765 3 7888885 567899998652 321 1222211111233333333 334443222 36999
Q ss_pred EcCCCCce---eEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCc
Q psy2153 86 VDPKSLKS---FDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 86 In~~Tlks---f~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T 131 (325)
++..+.+. |.........+..++.+.+| +|++-..+..|++|+.+.
T Consensus 273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 99887743 32223345678889998776 999999999999999765
No 202
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.28 E-value=3.6 Score=41.21 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=81.4
Q ss_pred CCccceeeCCC-----cee-eeEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCCCCe-EEEc-CCCC----Cce-
Q psy2153 6 PTPYPLNKILD-----TAL-PPVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLSKYH-TVTL-GLPH----HSV- 65 (325)
Q Consensus 6 ~~~L~~IkL~d-----sVl-~I~~~~~~VfVgLA------NGtLaVF~R~~~g-~WD~~~~~-~I~L-G~~~----~PV- 65 (325)
=|.+|+.++.+ .+. +-+..+++||++.. +|.|..|+...+. .|..+... .... ..|. .|+
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 214 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHY 214 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccc
Confidence 36788888876 443 33446899999998 7999999975433 36432110 0000 0000 000
Q ss_pred ----------------------eeeee---eCCEEEEEECC-----------------eEEEEcCCCCc---eeEecC-C
Q psy2153 66 ----------------------RSLAA---VYNKVWCGYKN-----------------KIHVVDPKSLK---SFDAHP-R 99 (325)
Q Consensus 66 ----------------------~cml~---v~~~LW~g~gn-----------------kI~VIn~~Tlk---sf~~~~-~ 99 (325)
-.... -.+.|+.+.+| .|+.||++|.+ .++..+ +
T Consensus 215 G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d 294 (571)
T 2ad6_A 215 GQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD 294 (571)
T ss_dssp CCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc
Confidence 01111 23789988864 69999999983 333322 1
Q ss_pred C--CCceeEEEE-----eCC--eEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 100 R--ESQVRQMTW-----AGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 100 ~--~~~V~~Ma~-----~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
. ...+...+. .|. .+.+....+..++++|.+|.+.+..+.+.+.
T Consensus 295 ~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 295 EWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp SSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 0 011222222 232 3566677788999999999999999887653
No 203
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.79 E-value=4.4 Score=36.21 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=39.7
Q ss_pred CEEEEEEC--CeEEEEcCCCC--ceeEecCCCCCceeEEEEeCCe-EEEEEeC----------CCeEEEEecCccceeee
Q psy2153 73 NKVWCGYK--NKIHVVDPKSL--KSFDAHPRRESQVRQMTWAGDG-VWVSIRL----------DSTLRMYNAHTYQHLQD 137 (325)
Q Consensus 73 ~~LW~g~g--nkI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~----------ss~IrL~ha~T~e~Lqd 137 (325)
+.||++.. ++|++++..+. ..++...+... ...|+.+.+| +|++... ...|..||.. .+.+..
T Consensus 197 ~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~ 274 (322)
T 2fp8_A 197 SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEV 274 (322)
T ss_dssp SEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEE
Confidence 46998853 68999998753 22221111112 6778887655 9999876 4567777764 455544
Q ss_pred ee
Q psy2153 138 VD 139 (325)
Q Consensus 138 Id 139 (325)
+.
T Consensus 275 ~~ 276 (322)
T 2fp8_A 275 IP 276 (322)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 204
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=90.62 E-value=7.3 Score=40.08 Aligned_cols=119 Identities=13% Similarity=0.068 Sum_probs=82.6
Q ss_pred cceeeCC-----CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCeE
Q psy2153 9 YPLNKIL-----DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKI 83 (325)
Q Consensus 9 L~~IkL~-----dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnkI 83 (325)
++.++.. +.|.++.+.++.+.++..|+++-+++...... .+..+.+.=+. ...|.++...++.|=.++.+.|
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~--~~~~~tL~~~h-~~~V~svaFsg~~LASa~~~tI 247 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSH--QPVSRMIQNAS-RRKITDLKIVDYKVVLTCPGYV 247 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSS--CCCEEEEECCC-SSCCCCEEEETTEEEEECSSEE
T ss_pred eeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcc--ccceeeecccc-cCcEEEEEEECCEEEEEeCCeE
Confidence 4555533 48999999977777888888888887543221 01112332132 3679898888777888888889
Q ss_pred EEEcCCCCceeEecCCCCCceeEEEE--eCCeEEEEEeC-CCeEEEEecCc
Q psy2153 84 HVVDPKSLKSFDAHPRRESQVRQMTW--AGDGVWVSIRL-DSTLRMYNAHT 131 (325)
Q Consensus 84 ~VIn~~Tlksf~~~~~~~~~V~~Ma~--~G~GVWiS~~~-ss~IrL~ha~T 131 (325)
++.+..+.+...........|..|+. +.+|-.++... +++ |||....
T Consensus 248 kLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~ 297 (588)
T 2j04_A 248 HKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE 297 (588)
T ss_dssp EEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSS
T ss_pred EEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc
Confidence 99999987432222234578899999 88886677776 788 9999884
No 205
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.33 E-value=2.7 Score=42.85 Aligned_cols=129 Identities=15% Similarity=0.081 Sum_probs=80.8
Q ss_pred CccceeeCCCce------------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCCCC--Ccee-eeee
Q psy2153 7 TPYPLNKILDTA------------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSVR-SLAA 70 (325)
Q Consensus 7 ~~L~~IkL~dsV------------l~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~~~--~PV~-cml~ 70 (325)
|.+|+.+++... -.+.+.+++||++..+|.|..++...+. .|..+ ++.+. ..++ .-++
T Consensus 87 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~------~~~~~~~~~~~~~P~v 160 (668)
T 1kv9_A 87 KELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQ------TTDPAKPYSITGAPRV 160 (668)
T ss_dssp CEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEE------CSCTTSSCBCCSCCEE
T ss_pred hhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeec------cCCCCCcceecCCCEE
Confidence 567777776432 2256689999999999999999965432 46532 22110 1111 1235
Q ss_pred eCCEEEEEEC-------CeEEEEcCCCCc---eeEecC-CCC---------------------------CceeEEEEe--
Q psy2153 71 VYNKVWCGYK-------NKIHVVDPKSLK---SFDAHP-RRE---------------------------SQVRQMTWA-- 110 (325)
Q Consensus 71 v~~~LW~g~g-------nkI~VIn~~Tlk---sf~~~~-~~~---------------------------~~V~~Ma~~-- 110 (325)
.+++|+++++ +.|+.+|++|.+ +|...+ +.. .....++.+
T Consensus 161 ~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~ 240 (668)
T 1kv9_A 161 VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE 240 (668)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETT
T ss_pred ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCC
Confidence 6899999875 579999999983 333211 110 011134553
Q ss_pred CCeEEEEEeCCC------------------eEEEEecCccceeeeeecc
Q psy2153 111 GDGVWVSIRLDS------------------TLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 111 G~GVWiS~~~ss------------------~IrL~ha~T~e~LqdIdIa 141 (325)
+.-|++...+.. .|..+|..|.+.+..++..
T Consensus 241 ~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~ 289 (668)
T 1kv9_A 241 LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVT 289 (668)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS
T ss_pred CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecC
Confidence 345776655432 5999999999999888764
No 206
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=89.97 E-value=3.4 Score=36.05 Aligned_cols=106 Identities=10% Similarity=0.186 Sum_probs=60.5
Q ss_pred eeeEEe-CCe-EEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEECCeEEEEcCCCC--ce
Q psy2153 19 LPPVHV-QGR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSL--KS 93 (325)
Q Consensus 19 l~I~~~-~~~-VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~Tl--ks 93 (325)
..|... +++ +++...++.|.+|+.+.+|... .+.+.+..+ ...+.+|..- +++||++.++.|.+++++.. +.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~~~~--~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~~~~~ 251 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHFTVE--PGKTDGLRVDAGGLIWASAGDGVHVLTPDGDELGR 251 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEECCS--SSCCCSEEEBTTSCEEEEETTEEEEECTTSCEEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEeeCC--CCCCCeEEECCCCCEEEEcCCeEEEECCCCCEEEE
Confidence 344443 333 4445556788888865444320 112233111 1233455443 57999999999999999743 33
Q ss_pred eEecCCCCCceeEEEEeC---CeEEEEEeCCCeEEEEecCccc
Q psy2153 94 FDAHPRRESQVRQMTWAG---DGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 94 f~~~~~~~~~V~~Ma~~G---~GVWiS~~~ss~IrL~ha~T~e 133 (325)
+..+. . +++++..+ .-+|++-.. -|.-++.++.+
T Consensus 252 ~~~~~---~-~~~~~f~~~d~~~L~v~t~~--~l~~~~~~~~~ 288 (296)
T 3e5z_A 252 VLTPQ---T-TSNLCFGGPEGRTLYMTVST--EFWSIETNVRG 288 (296)
T ss_dssp EECSS---C-CCEEEEESTTSCEEEEEETT--EEEEEECSCCB
T ss_pred EECCC---C-ceeEEEECCCCCEEEEEcCC--eEEEEEccccc
Confidence 33332 3 78877742 348988653 45555665544
No 207
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=89.93 E-value=5.6 Score=38.37 Aligned_cols=75 Identities=13% Similarity=0.067 Sum_probs=47.0
Q ss_pred ceeeeeeeC---CEEEEEECCe-EEEEcCCCC---ceeEecCCCCCceeEEEEeCCeEEE-------------EEeCCCe
Q psy2153 64 SVRSLAAVY---NKVWCGYKNK-IHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWV-------------SIRLDST 123 (325)
Q Consensus 64 PV~cml~v~---~~LW~g~gnk-I~VIn~~Tl---ksf~~~~~~~~~V~~Ma~~G~GVWi-------------S~~~ss~ 123 (325)
-+-++..+. +.|--|+.++ |.|.|.+|. +.|+.|...-..|.+++.+.+|..+ |-+.+.+
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 344455542 3444456655 999999987 5666555434567666666666543 4456789
Q ss_pred EEEEecCccceeeee
Q psy2153 124 LRMYNAHTYQHLQDV 138 (325)
Q Consensus 124 IrL~ha~T~e~LqdI 138 (325)
|++||..|.+.+..+
T Consensus 262 IklWd~~tgk~l~v~ 276 (356)
T 2w18_A 262 LIVINPKTTLSVGVM 276 (356)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCEEEEEE
Confidence 999999999988644
No 208
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.83 E-value=1 Score=48.38 Aligned_cols=97 Identities=15% Similarity=0.243 Sum_probs=58.3
Q ss_pred eCCeEEEEecCCcEEEEEcCC-CCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCeEEEEcCCCCceeEecCCCCC
Q psy2153 24 VQGRVVCALADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLKSFDAHPRRES 102 (325)
Q Consensus 24 ~~~~VfVgLANGtLaVF~R~~-~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnkI~VIn~~Tlksf~~~~~~~~ 102 (325)
..+.++|+|.||-|.-++|++ ++.|.. ....-.+-...++.++... + +........
T Consensus 180 ~~~~l~Vsl~dGgLlrl~r~~~~~~~~~---~~f~~~s~~~sl~~l~~~~-----~---------------~~~~~~~~~ 236 (950)
T 4gq2_M 180 STSEICVSFFNGGLTKIILNPKDASHYE---QHIDDSSYLFSLKKYLSLQ-----A---------------FKADYRSPN 236 (950)
T ss_dssp SSSEEEEEETTSCEEEEEEETTTTEEEE---EEECCCCCCCBCC---------------------------CCSSCCCTT
T ss_pred cCCeEEEEECCCCEEEEEecCCCCCcce---eeecCCcHHHhhhhhcccc-----c---------------CCCCCCCcc
Confidence 467999999999999998864 344421 1122222224555555421 0 111111223
Q ss_pred ceeEEEEeC-CeEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 103 QVRQMTWAG-DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 103 ~V~~Ma~~G-~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
.|..++... ...-+++..+.+||+|+..|.+++...|+...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~ 278 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQT 278 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccccc
Confidence 455555553 33445999999999999999999999998643
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.79 E-value=5.9 Score=35.75 Aligned_cols=100 Identities=10% Similarity=0.085 Sum_probs=62.8
Q ss_pred eeEEeC--Ce-EEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEECCeEEEEcCCCCc--e
Q psy2153 20 PPVHVQ--GR-VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSLK--S 93 (325)
Q Consensus 20 ~I~~~~--~~-VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~Tlk--s 93 (325)
...+.. ++ +|+...+|.|..|+... +. ...+.++ ..+.++... ++++|+++.+.|+++|+++.+ .
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~-~~-----~~~~~~~---~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLAS-GR-----KTVHALP---FMGSALAKISDSKQLIASDDGLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTT-TE-----EEEEECS---SCEEEEEEEETTEEEEEETTEEEEEETTTCCEEE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCC-Cc-----EEEEECC---CcceEEEEeCCCeEEEEECCCEEEEECCCCcEEE
Confidence 445543 44 45666788888887533 21 1233443 357777654 589999999999999987763 3
Q ss_pred eEecC--CCCCceeEEEEeCCe-EEEEEeC------CCeEEEEe
Q psy2153 94 FDAHP--RRESQVRQMTWAGDG-VWVSIRL------DSTLRMYN 128 (325)
Q Consensus 94 f~~~~--~~~~~V~~Ma~~G~G-VWiS~~~------ss~IrL~h 128 (325)
+.... .....++.++.+.+| +|++-.. ...|..|+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 32211 123468888888665 8987653 24566666
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=89.79 E-value=0.1 Score=48.98 Aligned_cols=125 Identities=16% Similarity=0.090 Sum_probs=61.4
Q ss_pred CCCccceeeCCCceeee-EEeCCeEEEE-ecCCcEEEEEcCC-CCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-
Q psy2153 5 HPTPYPLNKILDTALPP-VHVQGRVVCA-LADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK- 80 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I-~~~~~~VfVg-LANGtLaVF~R~~-~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g- 80 (325)
.=+.+|+.+. +.+.+. ...++++|++ -.||+|..|+... ...|..+...--.+. ..|+. ..++.|++|+.
T Consensus 28 tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~--~sp~~---~~~~~v~~g~~d 101 (369)
T 2hz6_A 28 TGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ--ASPCR---SSDGILYMGKKQ 101 (369)
T ss_dssp TCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT--TCSCC--------CCCCEEE
T ss_pred CCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc--cCceE---ecCCEEEEEeCC
Confidence 3467888888 655544 3456656665 7899999998743 234544321000001 13421 24678888775
Q ss_pred CeEEEEcCCCCc---eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 81 NKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 81 nkI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
+.|+.+|++|.+ .++.+.. + .+...+.-|+ +...+..|+.||+.|.+.+..++..
T Consensus 102 g~v~a~D~~tG~~~w~~~~~~~----~-~~~p~~~~v~-~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSSAFA----D-SLSPSTSLLY-LGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp EEEEEECCC---------------------------EE-EEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CEEEEEECCCCcEEEEecCCCc----c-cccccCCEEE-EEecCCEEEEEECCCCCEEEeEecc
Confidence 459999999873 3333221 1 1122444455 4466788999999999999888754
No 211
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.39 E-value=3.2 Score=37.13 Aligned_cols=128 Identities=12% Similarity=0.080 Sum_probs=78.9
Q ss_pred CCCccceeeCCC--ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCE-EEEEE
Q psy2153 5 HPTPYPLNKILD--TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNK-VWCGY 79 (325)
Q Consensus 5 ~~~~L~~IkL~d--sVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~-LW~g~ 79 (325)
.-|.+|+++.+. .+.++... ++++++ ..++.|..|+++..-.|.+ ..+. ...+.+...+ +++ +.+.+
T Consensus 24 tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~------~~~~-~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 24 TKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNI------AAPA-GCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp TTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEE------ECCT-TCEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEE------cCCC-CccccccEECCCCCEEEEec
Confidence 346788888875 46666654 678888 4577888898732223543 3332 1244444444 344 45556
Q ss_pred C--CeEEEEcCCCC--ceeEecCC---CCCceeEEEEe-CCeEEEEEeCCCeEEEEecCccceeeeeecc
Q psy2153 80 K--NKIHVVDPKSL--KSFDAHPR---RESQVRQMTWA-GDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 80 g--nkI~VIn~~Tl--ksf~~~~~---~~~~V~~Ma~~-G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
+ ++|+.++++-. ..|..... .......+... ...++++...+..|.+||.+ .+.+.+++..
T Consensus 96 ~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~ 164 (276)
T 3no2_A 96 GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS 164 (276)
T ss_dssp STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS
T ss_pred CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC
Confidence 5 45999987443 45554322 11122223333 33577888899999999999 9999999875
No 212
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.27 E-value=6.5 Score=36.85 Aligned_cols=112 Identities=10% Similarity=0.027 Sum_probs=64.4
Q ss_pred CCCceeeeEEe-CCe-EE-EEecCCc--EEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC----e
Q psy2153 14 ILDTALPPVHV-QGR-VV-CALADGS--VAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN----K 82 (325)
Q Consensus 14 L~dsVl~I~~~-~~~-Vf-VgLANGt--LaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn----k 82 (325)
.++.+.++.+. +++ ++ ++-.+|. |.+|+ ++.-+...+-.....+.++.... ..|..++.. +
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d--------~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD--------LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ 292 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE--------TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEE--------CCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcE
Confidence 34556666665 233 33 2333444 55544 33223334433235677776653 467777753 7
Q ss_pred EEEEcCCCCceeEecCCCCCceeEEEEeCCeEEEEE--eC--CCeEEEEecCccce
Q psy2153 83 IHVVDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSI--RL--DSTLRMYNAHTYQH 134 (325)
Q Consensus 83 I~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~--~~--ss~IrL~ha~T~e~ 134 (325)
|+++|..+.+..... .....+..++++.+|=++++ .. ...|++||..+.+.
T Consensus 293 i~~~d~~~~~~~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 293 VYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EEEEETTSSCCEECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EEEEECCCCCEEEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 999998887432221 12357888888866644433 33 35899999998765
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=89.11 E-value=2 Score=41.00 Aligned_cols=106 Identities=10% Similarity=-0.022 Sum_probs=71.2
Q ss_pred eCCeEEEEecCC-----cEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE-----------CCeEEE
Q psy2153 24 VQGRVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY-----------KNKIHV 85 (325)
Q Consensus 24 ~~~~VfVgLANG-----tLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~-----------gnkI~V 85 (325)
...++||.-..+ +|.|++-... +.-..|.+|. .| .+..- +.+||++. .|.|.+
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~-----~v~~~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCG-----VTLGHSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTT-----EEEEEEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred CCCeEEEECCccCCccceEEEEECCCC-----eEEEEEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 446899987654 7888873221 3336789997 68 44443 46899997 477999
Q ss_pred EcCCCC---ceeEecCCC----CCceeEEEEeCCe--EEEEEeC-CCeEEE--EecCccceeeeeecc
Q psy2153 86 VDPKSL---KSFDAHPRR----ESQVRQMTWAGDG--VWVSIRL-DSTLRM--YNAHTYQHLQDVDIE 141 (325)
Q Consensus 86 In~~Tl---ksf~~~~~~----~~~V~~Ma~~G~G--VWiS~~~-ss~IrL--~ha~T~e~LqdIdIa 141 (325)
||+.|+ +.+.+.... ......++.+.+| +|++-.. +..|.+ +|+.| +.+|++.
T Consensus 101 iD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~ 165 (368)
T 1mda_H 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA 165 (368)
T ss_dssp ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS
T ss_pred EECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC
Confidence 999999 466654111 1234567776555 7776544 567888 99999 6777663
No 214
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=89.09 E-value=5.3 Score=36.87 Aligned_cols=125 Identities=12% Similarity=0.110 Sum_probs=71.5
Q ss_pred ceeeCCCceeeeEEe-----CCeEEEEecCCcEEEEEcCCCCCCCCCCC-----eEEEcCCCCCceeeeee---------
Q psy2153 10 PLNKILDTALPPVHV-----QGRVVCALADGSVAIFRRGPDGQWDLSKY-----HTVTLGLPHHSVRSLAA--------- 70 (325)
Q Consensus 10 ~~IkL~dsVl~I~~~-----~~~VfVgLANGtLaVF~R~~~g~WD~~~~-----~~I~LG~~~~PV~cml~--------- 70 (325)
+.+.|+....++... ...+++.-.++.+.+|....++....... ..+..+. ++.++..
T Consensus 10 ~~lpl~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 86 (393)
T 4gq1_A 10 YQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGL---PTLHLSFSSSCSYSEN 86 (393)
T ss_dssp EECCTTCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSS---CEEEEEECTTCEEECC
T ss_pred eEecCCCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCC---CeeeEeecCCcccccc
Confidence 566777777777774 23466656788888887544332222211 1122222 2222211
Q ss_pred ----------e---CCEEEEEECCe-EEEEcCCCCc---e--eEecCCCCCceeEEEEeC---------CeEEEEEeCCC
Q psy2153 71 ----------V---YNKVWCGYKNK-IHVVDPKSLK---S--FDAHPRRESQVRQMTWAG---------DGVWVSIRLDS 122 (325)
Q Consensus 71 ----------v---~~~LW~g~gnk-I~VIn~~Tlk---s--f~~~~~~~~~V~~Ma~~G---------~GVWiS~~~ss 122 (325)
. ...|-.|+.++ |.+.|.++.. . +..-......|+.++.+. ..+-.|...|.
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 0 11244455544 8888877651 1 111122347799999863 34777899999
Q ss_pred eEEEEecCccceeee
Q psy2153 123 TLRMYNAHTYQHLQD 137 (325)
Q Consensus 123 ~IrL~ha~T~e~Lqd 137 (325)
+||+||..+.+.+..
T Consensus 167 tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 167 TLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEEEETTEEEEE
T ss_pred eEEEEECCCCceeee
Confidence 999999987765443
No 215
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.89 E-value=11 Score=38.39 Aligned_cols=136 Identities=12% Similarity=0.093 Sum_probs=82.7
Q ss_pred CccceeeCCC-----ceee-eEEeCCeEEEEec------CCcEEEEEcCCCC-CCCCC--CCe-EEEcCC---CCCce--
Q psy2153 7 TPYPLNKILD-----TALP-PVHVQGRVVCALA------DGSVAIFRRGPDG-QWDLS--KYH-TVTLGL---PHHSV-- 65 (325)
Q Consensus 7 ~~L~~IkL~d-----sVl~-I~~~~~~VfVgLA------NGtLaVF~R~~~g-~WD~~--~~~-~I~LG~---~~~PV-- 65 (325)
|.+|+.++.+ .+++ -+..+++|||+.. +|.|..|+...+. .|..+ .+. ...++. ...|+
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g 221 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYG 221 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccc
Confidence 6788888876 4443 3446899999985 8999999976533 36332 111 000100 00111
Q ss_pred ---------------------e-eee--eeCCEEEEEECC-----------------eEEEEcCCCCc---eeEecCCC-
Q psy2153 66 ---------------------R-SLA--AVYNKVWCGYKN-----------------KIHVVDPKSLK---SFDAHPRR- 100 (325)
Q Consensus 66 ---------------------~-cml--~v~~~LW~g~gn-----------------kI~VIn~~Tlk---sf~~~~~~- 100 (325)
- .+. .-.+.|+.+.+| +|+.+|++|.+ .|+..+..
T Consensus 222 ~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~ 301 (599)
T 1w6s_A 222 QKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDE 301 (599)
T ss_dssp CTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCS
T ss_pred ccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcc
Confidence 0 111 235789999886 79999999983 34433211
Q ss_pred -----CCceeEEEE---eCC--eEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 101 -----ESQVRQMTW---AGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 101 -----~~~V~~Ma~---~G~--GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
..+....-. .|. .+.+....+..++++|.+|.|.+....+.+
T Consensus 302 wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~ 353 (599)
T 1w6s_A 302 WDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDD 353 (599)
T ss_dssp SCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESST
T ss_pred ccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccC
Confidence 111111111 132 367778889999999999999999988765
No 216
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.72 E-value=5.9 Score=39.85 Aligned_cols=80 Identities=11% Similarity=0.077 Sum_probs=53.2
Q ss_pred CccceeeCCCce----------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCCCC--Cceee-eeeeC
Q psy2153 7 TPYPLNKILDTA----------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPH--HSVRS-LAAVY 72 (325)
Q Consensus 7 ~~L~~IkL~dsV----------l~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~~~--~PV~c-ml~v~ 72 (325)
|.+|+.+++... ....+.+++||++..+|.|..++...+. .|.. .++.+. ..+.+ -++++
T Consensus 89 ~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~------~~~~~~~~~~~~~sP~v~~ 162 (582)
T 1flg_A 89 KRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKK------KFADHGAGYTMTGAPTIVK 162 (582)
T ss_dssp CEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEE------ECSCGGGTCBCCSCCEEEE
T ss_pred cEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeee------cCCCCCcCcccccCCEEeC
Confidence 567888777543 2346789999999999999999975433 3643 222210 01111 13456
Q ss_pred C------EEEEEE-------CCeEEEEcCCCCc
Q psy2153 73 N------KVWCGY-------KNKIHVVDPKSLK 92 (325)
Q Consensus 73 ~------~LW~g~-------gnkI~VIn~~Tlk 92 (325)
+ .|++++ .+.|+.+|++|.+
T Consensus 163 ~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 163 DGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp CTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 7 899987 4689999999984
No 217
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=88.61 E-value=4.4 Score=41.45 Aligned_cols=129 Identities=14% Similarity=0.146 Sum_probs=80.0
Q ss_pred CccceeeCCCce------------eeeEEeCCeEEEEecCCcEEEEEcCCCC-CCCCCCC----eEEEcCCCCCceeeee
Q psy2153 7 TPYPLNKILDTA------------LPPVHVQGRVVCALADGSVAIFRRGPDG-QWDLSKY----HTVTLGLPHHSVRSLA 69 (325)
Q Consensus 7 ~~L~~IkL~dsV------------l~I~~~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~----~~I~LG~~~~PV~cml 69 (325)
|.+|+.+++... -...+.+++||++..+|.|..++...+. .|..+.. ....+. ..| +
T Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~--~sP----~ 164 (689)
T 1yiq_A 91 RLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTIT--GAP----R 164 (689)
T ss_dssp CEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCC--SCC----E
T ss_pred ceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCcccc--CCc----E
Confidence 567777765431 2356789999999999999999975432 4653321 000111 133 3
Q ss_pred eeCCEEEEEEC-------CeEEEEcCCCCc---eeEecC-CCC---------------------------CceeEEEEe-
Q psy2153 70 AVYNKVWCGYK-------NKIHVVDPKSLK---SFDAHP-RRE---------------------------SQVRQMTWA- 110 (325)
Q Consensus 70 ~v~~~LW~g~g-------nkI~VIn~~Tlk---sf~~~~-~~~---------------------------~~V~~Ma~~- 110 (325)
+++++|+++++ +.|+.+|++|.+ .|...+ ++. ..-..++.+
T Consensus 165 v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~ 244 (689)
T 1yiq_A 165 VVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP 244 (689)
T ss_dssp EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET
T ss_pred EECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC
Confidence 56899999874 579999999984 233211 110 011134443
Q ss_pred -CCeEEEEEeCCC------------------eEEEEecCccceeeeeecc
Q psy2153 111 -GDGVWVSIRLDS------------------TLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 111 -G~GVWiS~~~ss------------------~IrL~ha~T~e~LqdIdIa 141 (325)
+.-|++...+.. .|..+|++|.+.+..+...
T Consensus 245 ~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~ 294 (689)
T 1yiq_A 245 ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTT 294 (689)
T ss_dssp TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESS
T ss_pred CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecC
Confidence 344666554432 5999999999999888764
No 218
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=88.54 E-value=13 Score=33.20 Aligned_cols=115 Identities=10% Similarity=0.068 Sum_probs=70.8
Q ss_pred CceeeeEEe-CCeEEEEecCC-------------------------cEEEEEcCCCCCCCCCCCeEEEcCCC-CCceeee
Q psy2153 16 DTALPPVHV-QGRVVCALADG-------------------------SVAIFRRGPDGQWDLSKYHTVTLGLP-HHSVRSL 68 (325)
Q Consensus 16 dsVl~I~~~-~~~VfVgLANG-------------------------tLaVF~R~~~g~WD~~~~~~I~LG~~-~~PV~cm 68 (325)
..|.+|... ++++||+-.++ +|.+|+... |. ..-..|.. ......+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-g~------~~~~~~~~~~~~p~gi 96 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN-AE------ILQSSGKNLFYLPHGL 96 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT-CC------EEEEECTTTCSSEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC-Ce------EEeccCCCccCCceEE
Confidence 467777775 57899887765 577776432 21 11123321 1223444
Q ss_pred eee-CCEEEEEEC--CeEEEEcCCCC--ceeEec--------CCCCCceeEEEEeC--CeEEEEEe-CCCeEEEEecCcc
Q psy2153 69 AAV-YNKVWCGYK--NKIHVVDPKSL--KSFDAH--------PRRESQVRQMTWAG--DGVWVSIR-LDSTLRMYNAHTY 132 (325)
Q Consensus 69 l~v-~~~LW~g~g--nkI~VIn~~Tl--ksf~~~--------~~~~~~V~~Ma~~G--~GVWiS~~-~ss~IrL~ha~T~ 132 (325)
..- +++||++.. ++|++++++.. ...... .........++.+. ..+|++-. ....|++|+ .+.
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 443 467998775 67999998754 122221 22335688899984 56999986 789999999 455
Q ss_pred ceeeee
Q psy2153 133 QHLQDV 138 (325)
Q Consensus 133 e~LqdI 138 (325)
+.+..+
T Consensus 176 ~~~~~~ 181 (329)
T 3fvz_A 176 KFVTQW 181 (329)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 555554
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=88.30 E-value=1.9 Score=43.10 Aligned_cols=132 Identities=8% Similarity=0.077 Sum_probs=73.5
Q ss_pred CccceeeCCCceeeeEE--------------e----CCeEEE-EecCCcEEEEEcCCCCCCCCCCCeEE-------EcCC
Q psy2153 7 TPYPLNKILDTALPPVH--------------V----QGRVVC-ALADGSVAIFRRGPDGQWDLSKYHTV-------TLGL 60 (325)
Q Consensus 7 ~~L~~IkL~dsVl~I~~--------------~----~~~VfV-gLANGtLaVF~R~~~g~WD~~~~~~I-------~LG~ 60 (325)
|.+|++.||..-..+.| . ..++|| +|.+++|.||+-..+. -.+.-.++| +.|.
T Consensus 59 ~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p-~~p~~~k~ie~~~~~~~~g~ 137 (462)
T 2ece_A 59 KIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNP-REPKIIKVIEPEEVKKVSGY 137 (462)
T ss_dssp SEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCT-TSCEEEEEECHHHHHHHHCE
T ss_pred eEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCC-CCceeeeeechhhcccccCC
Confidence 56788888874422222 2 556777 7888899999843321 112222444 2242
Q ss_pred CCCceeeeeeeCCEEEEEEC--------CeEEEEcCCCC---ceeEecCCCCCcee---------EEEEeCCeEEEEE--
Q psy2153 61 PHHSVRSLAAVYNKVWCGYK--------NKIHVVDPKSL---KSFDAHPRRESQVR---------QMTWAGDGVWVSI-- 118 (325)
Q Consensus 61 ~~~PV~cml~v~~~LW~g~g--------nkI~VIn~~Tl---ksf~~~~~~~~~V~---------~Ma~~G~GVWiS~-- 118 (325)
..|=+-.+.-++ +++.+- +.|.+||++|. +.++........-. .|+.+.-|.|-.+
T Consensus 138 -s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 138 -SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp -EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred -CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 123222222334 776443 35999999998 34443322211111 2222222211111
Q ss_pred ---------eCCCeEEEEecCccceeeeeecc
Q psy2153 119 ---------RLDSTLRMYNAHTYQHLQDVDIE 141 (325)
Q Consensus 119 ---------~~ss~IrL~ha~T~e~LqdIdIa 141 (325)
..+..|.+||..+.+.++.|++.
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 23899999999999999999995
No 220
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=88.16 E-value=6.1 Score=35.26 Aligned_cols=107 Identities=17% Similarity=0.163 Sum_probs=66.5
Q ss_pred CCeEEEEecCCcEEEEEcCCCC-CCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEECCeEEEEcCCCC---ceeEecCC
Q psy2153 25 QGRVVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYKNKIHVVDPKSL---KSFDAHPR 99 (325)
Q Consensus 25 ~~~VfVgLANGtLaVF~R~~~g-~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~gnkI~VIn~~Tl---ksf~~~~~ 99 (325)
++.++++=.|+.|.+|++..+. .|. +..+.. ..+++.... +++++++..+.|+.+|+ +. ..|...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~------~~~~~~-~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~-- 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWE------YPLEKG-WECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAP-- 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEE------EECCTT-CCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECC--
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEE------eCCCcc-CCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCC--
Confidence 3456667779999999974432 344 333321 123333333 67899977788999999 66 234432
Q ss_pred CCCceeEEEEeCC-eEEEEEeC-CCeEEEEecCccceeeeeecch
Q psy2153 100 RESQVRQMTWAGD-GVWVSIRL-DSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 100 ~~~~V~~Ma~~G~-GVWiS~~~-ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
....+.......+ .++++-.. ...|..||. +.+.+.++.+..
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~ 118 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET 118 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC
Confidence 2234554444433 46667666 677888886 788888887754
No 221
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.95 E-value=2.2 Score=42.47 Aligned_cols=70 Identities=11% Similarity=0.081 Sum_probs=52.5
Q ss_pred eeeeeee--CCEEEEEECCeEEEEcCCCC---c--eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeee
Q psy2153 65 VRSLAAV--YNKVWCGYKNKIHVVDPKSL---K--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQD 137 (325)
Q Consensus 65 V~cml~v--~~~LW~g~gnkI~VIn~~Tl---k--sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~Lqd 137 (325)
|.++..- +..|..++.++|+++|..+. + .+..+ ...+..++++.+|=|+++..+..|++||..+.+..+.
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~---~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHG---EGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQL 187 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCS---SSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEEC
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccC---CcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEe
Confidence 5555444 35688888899999998775 2 23222 3668999999999888888888999999998776543
No 222
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.51 E-value=11 Score=31.23 Aligned_cols=115 Identities=10% Similarity=-0.036 Sum_probs=64.4
Q ss_pred eeeCCCceeeeEEe-CC-eEE-EEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC----C
Q psy2153 11 LNKILDTALPPVHV-QG-RVV-CALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK----N 81 (325)
Q Consensus 11 ~IkL~dsVl~I~~~-~~-~Vf-VgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g----n 81 (325)
.+.....+.++.+. ++ +++ ++-.+|++.+|.-+..+ .....+-....+++++.... ..|+.++. .
T Consensus 124 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 124 LMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp ECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred EeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCC------CcceEcccCCCccccceECCCCCEEEEEecCCCCc
Confidence 33334456666665 33 343 56677877777643221 12334433335677776653 35666653 4
Q ss_pred eEEEEcCCCC--ceeEecCCCCCceeEEEEeCCeEEEEE--eC----------CCeEEEEecCccce
Q psy2153 82 KIHVVDPKSL--KSFDAHPRRESQVRQMTWAGDGVWVSI--RL----------DSTLRMYNAHTYQH 134 (325)
Q Consensus 82 kI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~GVWiS~--~~----------ss~IrL~ha~T~e~ 134 (325)
+|+.++..+. +.+..+ ...+..++++.+|=++++ .. ...|++||..+.+.
T Consensus 198 ~i~~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEEEETTSSCEEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cEEEECCCCCCcEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 5777775554 333322 356788888866633332 22 25699999988765
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=86.86 E-value=3.6 Score=36.50 Aligned_cols=86 Identities=7% Similarity=0.062 Sum_probs=50.2
Q ss_pred eEEEEecC------CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeee-eCCEEEEEECCeEEEEcCCCC--ceeEec
Q psy2153 27 RVVCALAD------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNKIHVVDPKSL--KSFDAH 97 (325)
Q Consensus 27 ~VfVgLAN------GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~-v~~~LW~g~gnkI~VIn~~Tl--ksf~~~ 97 (325)
.+|++-.. +.|.+|+.+.++ +.+.+.+.-..+..| ..|.. -+++||++.++.|++++++.. ..+...
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~~~~~p-dgi~~d~~G~lwv~~~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASVPDGLP-DGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECCSSSCC-CSEEECTTSCEEECCSSEEEEECTTSCEEEEEECS
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEECCCCCC-CeEEECCCCCEEEecCCcEEEECCCCCEEEEEECC
Confidence 47777664 678888765433 222222211111122 23333 247899999999999999654 333332
Q ss_pred CCCCCceeEEEEe--CCeEEEEEeC
Q psy2153 98 PRRESQVRQMTWA--GDGVWVSIRL 120 (325)
Q Consensus 98 ~~~~~~V~~Ma~~--G~GVWiS~~~ 120 (325)
. .++.++.. +..+|++...
T Consensus 277 ~----~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 277 G----TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp S----CCCEEEECTTSCEEEEEETT
T ss_pred C----ceeEEEEeCCCCEEEEEcCC
Confidence 2 47777774 4569988763
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=86.12 E-value=0.41 Score=44.79 Aligned_cols=106 Identities=11% Similarity=-0.023 Sum_probs=58.5
Q ss_pred eCCeEEEEecCCcEEEEEcCCC-CCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-CeEEEEcCCCCc---eeEecC
Q psy2153 24 VQGRVVCALADGSVAIFRRGPD-GQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-NKIHVVDPKSLK---SFDAHP 98 (325)
Q Consensus 24 ~~~~VfVgLANGtLaVF~R~~~-g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g-nkI~VIn~~Tlk---sf~~~~ 98 (325)
.++.||+|..+|+|..|+...+ -.|..+...... ..| .++.|+.++. +.|+.+|+++.+ +++...
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~~~----~~p------~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFADS----LSP------STSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp ----CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCccc----ccc------cCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 5788999999999999986543 257655432110 122 5688888876 569999998872 333322
Q ss_pred CCCCceeEEEEeC-----CeEEEEEeCCCeEEEEecCccceeeeeecchhhh
Q psy2153 99 RRESQVRQMTWAG-----DGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 145 (325)
Q Consensus 99 ~~~~~V~~Ma~~G-----~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~v~ 145 (325)
. ...+..+ ..|++ ...+..|+.||..|.+.+.+.++...+.
T Consensus 161 ~-----~~~~~~~~~~~~~~v~~-~~~dg~v~a~d~~tG~~~W~~~~~~pv~ 206 (369)
T 2hz6_A 161 Y-----AASLPEDDVDYKMSHFV-SNGDGLVVTVDSESGDVLWIQNYASPVV 206 (369)
T ss_dssp E-----CCBCCCCCTTCCCCEEE-EETSCEEEEECTTTCCEEEEEECSSCEE
T ss_pred c-----cCccccCCccccceEEE-ECCCCEEEEEECCCCcEEEEecCCCceE
Confidence 1 1122232 34554 4567899999999999999998765543
No 225
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=85.66 E-value=6 Score=39.05 Aligned_cols=111 Identities=11% Similarity=0.092 Sum_probs=67.2
Q ss_pred CceeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEECCeEEEEcCCC---
Q psy2153 16 DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKS--- 90 (325)
Q Consensus 16 dsVl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~gnkI~VIn~~T--- 90 (325)
..|.++.+..++.++...+|+|.+++... + +...+-....++.++... ++.|-.+..++|++++..+
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~-~-------~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLA-R-------KVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEETTT-T-------EEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTS
T ss_pred cCceeEEECCCCeEEEEECCEEEEEECCC-C-------ceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccc
Confidence 45888887654444444789999988533 2 222222212445555444 3467667788999999887
Q ss_pred --CceeEecCCCC--------------CceeEEEEeCCeEEEEEe----------------------------------C
Q psy2153 91 --LKSFDAHPRRE--------------SQVRQMTWAGDGVWVSIR----------------------------------L 120 (325)
Q Consensus 91 --lksf~~~~~~~--------------~~V~~Ma~~G~GVWiS~~----------------------------------~ 120 (325)
.+......... ..+..++++.+|=++++. .
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 53222222111 225788888777444443 3
Q ss_pred CCeEEEEecCccce
Q psy2153 121 DSTLRMYNAHTYQH 134 (325)
Q Consensus 121 ss~IrL~ha~T~e~ 134 (325)
+..|++||..+.+.
T Consensus 234 ~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 234 HVTVGIYHLATGKT 247 (706)
T ss_dssp EEEEEEEETTTTEE
T ss_pred eeEEEEEECCCCce
Confidence 46799999988764
No 226
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=83.85 E-value=1.5 Score=41.88 Aligned_cols=113 Identities=8% Similarity=0.064 Sum_probs=70.9
Q ss_pred eCCeEEEEecCCcEEEEEcCCCC-CCCCCCC---eEEEcCCCCCceeeeeeeCCEEEEEE---CCeEEEEcCCCC-cee-
Q psy2153 24 VQGRVVCALADGSVAIFRRGPDG-QWDLSKY---HTVTLGLPHHSVRSLAAVYNKVWCGY---KNKIHVVDPKSL-KSF- 94 (325)
Q Consensus 24 ~~~~VfVgLANGtLaVF~R~~~g-~WD~~~~---~~I~LG~~~~PV~cml~v~~~LW~g~---gnkI~VIn~~Tl-ksf- 94 (325)
.++.|||+..||+|..+++..+. .|.++.. ..+....+.. ..++.+|+.. -++++.+++++. +.+
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~------~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~ 82 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR------LETYETLIIEPFGDGNIYYFNAHQGLQKLP 82 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCT------TTSSEEEEECCSTTTEEEEEETTTEEEEEE
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCcc------ccCCcEEEEEECCCCEEEEEECCCCcEEee
Confidence 46789999999999999986432 4765432 1122211111 1356888762 478999998876 222
Q ss_pred -EecCC-CCCceeE---EEE------eCCeEEEEEeCCCeEEEEecCccceeeeeecch
Q psy2153 95 -DAHPR-RESQVRQ---MTW------AGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142 (325)
Q Consensus 95 -~~~~~-~~~~V~~---Ma~------~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~ 142 (325)
++..- ..+.+.. .+. +.+|+-++-..+..+...|+.|.+.+.++.+..
T Consensus 83 ~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~ 141 (339)
T 2be1_A 83 LSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGS 141 (339)
T ss_dssp EEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTC
T ss_pred eccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCC
Confidence 22210 0111221 111 145666788889999999999999999999874
No 227
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=83.18 E-value=20 Score=33.48 Aligned_cols=91 Identities=10% Similarity=-0.046 Sum_probs=56.9
Q ss_pred CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEECC----eEEEEcCCCCceeEecCCCCCceeEEE
Q psy2153 35 GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKN----KIHVVDPKSLKSFDAHPRRESQVRQMT 108 (325)
Q Consensus 35 GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gn----kI~VIn~~Tlksf~~~~~~~~~V~~Ma 108 (325)
++|.+++.+ | ...+.+.-+. .+|.++.... ..|..++.+ .|++.|.++.+...... ....+..++
T Consensus 159 ~~i~i~d~~--g----~~~~~l~~~~--~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~ 229 (415)
T 2hqs_A 159 YELRVSDYD--G----YNQFVVHRSP--QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPA 229 (415)
T ss_dssp EEEEEEETT--S----CSCEEEEEES--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEE
T ss_pred ceEEEEcCC--C----CCCEEEeCCC--CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-CCCcccCEE
Confidence 577777742 2 2234443332 6788877664 456555443 89999999884333222 125788999
Q ss_pred EeCCeEEEE--EeC--CCeEEEEecCccce
Q psy2153 109 WAGDGVWVS--IRL--DSTLRMYNAHTYQH 134 (325)
Q Consensus 109 ~~G~GVWiS--~~~--ss~IrL~ha~T~e~ 134 (325)
++.+|=+++ ... ...|++||..+.+.
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 987775444 333 34599999988765
No 228
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.61 E-value=1.3 Score=48.24 Aligned_cols=97 Identities=15% Similarity=0.240 Sum_probs=51.7
Q ss_pred eCCeEEEEecCCcEEEEEcCC-CCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCeEEEEcCCCCceeEecCCCCC
Q psy2153 24 VQGRVVCALADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVDPKSLKSFDAHPRRES 102 (325)
Q Consensus 24 ~~~~VfVgLANGtLaVF~R~~-~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnkI~VIn~~Tlksf~~~~~~~~ 102 (325)
..+.++|+|.||-|.-++|++ ++.|... ...-++-...++.+....+ +........
T Consensus 182 s~~~lvVsL~DGgLLrL~r~~~d~~~~~~---~f~~~s~l~sL~~l~~~~~--------------------~~~~~~~~~ 238 (1139)
T 4fhn_B 182 STSEICVSFFNGGLTKIILNPKDASHYEQ---HIDDSSYLFSLKKYLSLQA--------------------FKADYRSPN 238 (1139)
T ss_dssp CSSEEEEEETTSCEEEEEEETTEEEEEEE---C-----------------------------------------CCCCTT
T ss_pred cCCcEEEEECCCCEEEEEecCCCCCCcee---eecCCcHHhhhhhhccccc--------------------CCccCCCcc
Confidence 477899999999999998864 3444311 1111111134444443211 000001112
Q ss_pred ceeEEEE-eCCeEEEEEeCCCeEEEEecCccceeeeeecchh
Q psy2153 103 QVRQMTW-AGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143 (325)
Q Consensus 103 ~V~~Ma~-~G~GVWiS~~~ss~IrL~ha~T~e~LqdIdIa~~ 143 (325)
.+..++. .....=+++..+.+||+|+..|.+++...|+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~~ 280 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQT 280 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCCS
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhhc
Confidence 2222333 3333445999999999999999999999998754
No 229
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=82.58 E-value=5.8 Score=39.12 Aligned_cols=28 Identities=7% Similarity=-0.057 Sum_probs=19.8
Q ss_pred eeeeeee--CCEEEEEECCeEEEEcCCCCc
Q psy2153 65 VRSLAAV--YNKVWCGYKNKIHVVDPKSLK 92 (325)
Q Consensus 65 V~cml~v--~~~LW~g~gnkI~VIn~~Tlk 92 (325)
++.+..- +..|-.++.++|++++..+.+
T Consensus 116 ~~~~~~SPdG~~la~~~~~~i~~~~~~~g~ 145 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFENNIYYCAHVGKQ 145 (723)
T ss_dssp CSBCCBCSSTTCEEEEETTEEEEESSSSSC
T ss_pred ccccEECCCCCEEEEEECCeEEEEECCCCc
Confidence 5544444 346777778899999998873
No 230
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=81.89 E-value=29 Score=31.27 Aligned_cols=97 Identities=11% Similarity=0.085 Sum_probs=58.6
Q ss_pred cCCcEEEEEcCCCCCCCCCCCeEEEc---CCCCCceeeeeeeC--CEEEEEEC--CeEEEEcCC-CCc--ee-EecCC-C
Q psy2153 33 ADGSVAIFRRGPDGQWDLSKYHTVTL---GLPHHSVRSLAAVY--NKVWCGYK--NKIHVVDPK-SLK--SF-DAHPR-R 100 (325)
Q Consensus 33 ANGtLaVF~R~~~g~WD~~~~~~I~L---G~~~~PV~cml~v~--~~LW~g~g--nkI~VIn~~-Tlk--sf-~~~~~-~ 100 (325)
.+|++.+|+.+.+|.. ...+.. +. ...+.++..-. ..|+++.. ++|++++.+ +.+ .. +.... .
T Consensus 117 ~~g~v~v~~~~~~g~~----~~~~~~~~~~~-~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 117 FAGYGNVFSVSETGKL----EKNVQNYEYQE-NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp SCCEEEEEEECTTCCE----EEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred CCceEEEEccCCCCcC----cceEeeEEeCC-CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 4778999987655531 122322 11 13455665553 46887763 689999987 542 11 12211 2
Q ss_pred CCceeEEEEeCCe--EEEEEeCCCeEEEEecC--ccce
Q psy2153 101 ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH--TYQH 134 (325)
Q Consensus 101 ~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~--T~e~ 134 (325)
...+++|+.+.+| +|++-..+..|++|+.. +.+.
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 4668999998666 77777778899998643 4443
No 231
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=81.55 E-value=20 Score=31.79 Aligned_cols=98 Identities=8% Similarity=0.083 Sum_probs=60.1
Q ss_pred eEEEE-ecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEEC------------CeEEEEcCCCC-
Q psy2153 27 RVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK------------NKIHVVDPKSL- 91 (325)
Q Consensus 27 ~VfVg-LANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~g------------nkI~VIn~~Tl- 91 (325)
.+||+ ..++.|.+|+.+... ....+.+. ..+. | ..|..- +++||++.. ++|++++++..
T Consensus 198 ~lyv~d~~~~~I~~~~~~~~~---~~~~~~~~-~~~g-P-~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 198 FVLVAEFLSHQIVKYWLEGPK---KGTAEVLV-KIPN-P-GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp EEEEEEGGGTEEEEEESSSTT---TTCEEEEE-ECSS-E-EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCE
T ss_pred EEEEEeCCCCeEEEEECCCCc---CCccceEE-eCCC-C-CCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCE
Confidence 58888 566899999864321 12222221 1122 3 334332 468999984 45999998643
Q ss_pred -ceeEecCCC-CCceeEEEEeCCeEEEEEeCCCeEEEEecC
Q psy2153 92 -KSFDAHPRR-ESQVRQMTWAGDGVWVSIRLDSTLRMYNAH 130 (325)
Q Consensus 92 -ksf~~~~~~-~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~ 130 (325)
+.+...... ...++.++..+.-+|++-.....|..|+..
T Consensus 272 ~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 272 LEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred EEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecc
Confidence 334332211 356777777777899998888888888764
No 232
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.24 E-value=46 Score=31.31 Aligned_cols=112 Identities=11% Similarity=0.014 Sum_probs=71.2
Q ss_pred CceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE----EcCCC-CCceeeeeee--CCEEEEEEC--CeEE
Q psy2153 16 DTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV----TLGLP-HHSVRSLAAV--YNKVWCGYK--NKIH 84 (325)
Q Consensus 16 dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I----~LG~~-~~PV~cml~v--~~~LW~g~g--nkI~ 84 (325)
..+.++... ++++|++-.+|+|..|+.+... ...+ ..|.. ..|...|..- ++.||++.. ++|+
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~------~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE------VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEETTTCC------EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC------EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 345566665 5889998888889988854321 1222 12211 1243355555 479999875 6799
Q ss_pred EEcCCCC-ceeEecC------------CCCCceeEEEEeCCe-EEEEEe-CCCeEEEEecCccc
Q psy2153 85 VVDPKSL-KSFDAHP------------RRESQVRQMTWAGDG-VWVSIR-LDSTLRMYNAHTYQ 133 (325)
Q Consensus 85 VIn~~Tl-ksf~~~~------------~~~~~V~~Ma~~G~G-VWiS~~-~ss~IrL~ha~T~e 133 (325)
.++.... +.+.-+. ........|+.+.+| +|++-+ ....|+.|+..+.+
T Consensus 293 ~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 293 KITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 9998764 3232221 112457789988655 999998 89999999966554
No 233
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=77.15 E-value=51 Score=31.66 Aligned_cols=114 Identities=13% Similarity=0.205 Sum_probs=78.0
Q ss_pred eEEEEecCCcEEEEEcC--CCCCCCCCCCeEEEcCCCCCceeeeee-eCCEEEEEECCe-EEEEcCC--C---CceeEec
Q psy2153 27 RVVCALADGSVAIFRRG--PDGQWDLSKYHTVTLGLPHHSVRSLAA-VYNKVWCGYKNK-IHVVDPK--S---LKSFDAH 97 (325)
Q Consensus 27 ~VfVgLANGtLaVF~R~--~~g~WD~~~~~~I~LG~~~~PV~cml~-v~~~LW~g~gnk-I~VIn~~--T---lksf~~~ 97 (325)
++||.=.+|.+..|+-. ..|....+..+.+.+|+ .|=-|..- -.++||++-++. |..++++ + .+....-
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~ 222 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA 222 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence 59999999999998853 34444444446688886 45433222 247999999976 9999955 3 2333221
Q ss_pred C--CCCCceeEEEEe----CCe-EEEEEeCCCeEEEEecC-ccceeeeeecch
Q psy2153 98 P--RRESQVRQMTWA----GDG-VWVSIRLDSTLRMYNAH-TYQHLQDVDIEP 142 (325)
Q Consensus 98 ~--~~~~~V~~Ma~~----G~G-VWiS~~~ss~IrL~ha~-T~e~LqdIdIa~ 142 (325)
. .-...+..|+.. |.| +.+|.+.+++.-+||.+ +++.+..|.|..
T Consensus 223 ~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~ 275 (355)
T 3amr_A 223 DGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITD 275 (355)
T ss_dssp SSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEECC
T ss_pred cCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEecC
Confidence 1 112357878774 234 78888889999999997 899999998774
No 234
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=75.56 E-value=7.3 Score=33.84 Aligned_cols=58 Identities=5% Similarity=-0.057 Sum_probs=43.1
Q ss_pred EEEEEC-CeEEEEcCCCC-ceeEecCCCCCceeEEEEeCCe-EEEEEeCCCeEEEEecCcccee
Q psy2153 75 VWCGYK-NKIHVVDPKSL-KSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 75 LW~g~g-nkI~VIn~~Tl-ksf~~~~~~~~~V~~Ma~~G~G-VWiS~~~ss~IrL~ha~T~e~L 135 (325)
+|++.. +.|+.+++++. +.|. .....+..|+.+.+| +|++......|.+||..+.+..
T Consensus 43 ~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 43 IFSDVRQNRTWAWSDDGQLSPEM---HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEGGGTEEEEEETTSCEEEEE---SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEE---CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 667665 67999999886 3333 234678889987555 9988888899999998776643
No 235
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=75.34 E-value=15 Score=36.10 Aligned_cols=56 Identities=13% Similarity=0.218 Sum_probs=37.0
Q ss_pred CeEEEEcCCCCceeEec--CCCCCceeEEEEeCCeEEEEE--eCC----CeEEEEecCccceee
Q psy2153 81 NKIHVVDPKSLKSFDAH--PRRESQVRQMTWAGDGVWVSI--RLD----STLRMYNAHTYQHLQ 136 (325)
Q Consensus 81 nkI~VIn~~Tlksf~~~--~~~~~~V~~Ma~~G~GVWiS~--~~s----s~IrL~ha~T~e~Lq 136 (325)
++|+++|.++.+..... ......+.+++++.+|=++++ .+. ..|++||..+.+.++
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 56999999887432222 234467899999877744443 332 489999999884433
No 236
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=73.15 E-value=67 Score=30.76 Aligned_cols=107 Identities=13% Similarity=0.053 Sum_probs=69.6
Q ss_pred eeeeEE--eCCeEEEEecCCcEEEEEcC--------CCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECCeEEEEc
Q psy2153 18 ALPPVH--VQGRVVCALADGSVAIFRRG--------PDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVVD 87 (325)
Q Consensus 18 Vl~I~~--~~~~VfVgLANGtLaVF~R~--------~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gnkI~VIn 87 (325)
+..|.. ..+.+|+|-.+ .+.|++-. +.+. +++...+.+ | . |+.|..-++.|+++.++.|++++
T Consensus 40 ~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~--~~~~~~~~l--p-~-V~~l~fd~~~L~v~~~~~l~v~d 112 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTP--LTFKWEKEI--P-D-VIFVCFHGDQVLVSTRNALYSLD 112 (388)
T ss_dssp CBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCC--CCCSEEEEC--T-T-EEEEEEETTEEEEEESSEEEEEE
T ss_pred ccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccc--ccceEEeeC--C-C-eeEEEECCCEEEEEcCCcEEEEE
Confidence 444443 46667777776 55557622 1111 333345555 3 3 88888845689999889999999
Q ss_pred CCCCc---eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCcccee
Q psy2153 88 PKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 88 ~~Tlk---sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~L 135 (325)
..++. ....+. ..|..+...... ...+..+..|.+||.++.+..
T Consensus 113 v~sl~~~~~~~~~~---~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 113 LEELSEFRTVTSFE---KPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp SSSTTCEEEEEECS---SCEEEEEECSSE-EEEEETTSEEEEEETTTCCEE
T ss_pred chhhhccCccceee---cceeeEEecCCC-EEEEECCCCEEEEEccCCccc
Confidence 99983 333333 346666665544 556789999999999977764
No 237
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=72.20 E-value=45 Score=36.60 Aligned_cols=121 Identities=16% Similarity=0.194 Sum_probs=75.2
Q ss_pred CCCccceeeCCC--ceeeeEEe------CCeEEEEe----------cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCcee
Q psy2153 5 HPTPYPLNKILD--TALPPVHV------QGRVVCAL----------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR 66 (325)
Q Consensus 5 ~~~~L~~IkL~d--sVl~I~~~------~~~VfVgL----------ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~ 66 (325)
.|+.++.+.|.+ .|+|++.. +.++.||+ +.|.|.||+-. ++ .++.-+.-.+ ..||+
T Consensus 816 t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~-~~--kL~lv~~~~v---~g~v~ 889 (1158)
T 3ei3_A 816 TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS-DG--KLQTVAEKEV---KGAVY 889 (1158)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE-TT--EEEEEEEEEE---SSCEE
T ss_pred CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE-CC--EEEEEEEEEc---CCcCE
Confidence 478888888886 78888864 46788998 46889999854 11 1111111222 36899
Q ss_pred eeeeeCCEEEEEECCeEEEEcCCCCce--eEecCCCCCceeEEEEeCCeEEEEEeCCCe-EEEEecCc
Q psy2153 67 SLAAVYNKVWCGYKNKIHVVDPKSLKS--FDAHPRRESQVRQMTWAGDGVWVSIRLDST-LRMYNAHT 131 (325)
Q Consensus 67 cml~v~~~LW~g~gnkI~VIn~~Tlks--f~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~-IrL~ha~T 131 (325)
+|...+++|-+|.|++|++.+-..-+. .+......-.+..+...|+-+.++=-..|. +--|+.+.
T Consensus 890 al~~~~g~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~ 957 (1158)
T 3ei3_A 890 SMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPME 957 (1158)
T ss_dssp EEEEETTEEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTT
T ss_pred EEeeeCCEEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCC
Confidence 999999999999999999988654322 222211111233555556666555444333 33466543
No 238
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=71.84 E-value=15 Score=38.72 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=46.1
Q ss_pred CceeeeeeeC--CEEEEEEC-CeEEEEcCCCCceeEecCCCCCceeEEEEeCCeEEEEEeC-----------CCeEEEEe
Q psy2153 63 HSVRSLAAVY--NKVWCGYK-NKIHVVDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRL-----------DSTLRMYN 128 (325)
Q Consensus 63 ~PV~cml~v~--~~LW~g~g-nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~-----------ss~IrL~h 128 (325)
..+..+.... ..|..++. +.|+++|.++.+...........|..++++.+|=|++... ...|++||
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence 4455555543 45655555 4799999988743322222346678889987775555432 25899999
Q ss_pred cCccc
Q psy2153 129 AHTYQ 133 (325)
Q Consensus 129 a~T~e 133 (325)
..+.+
T Consensus 459 ~~~g~ 463 (1045)
T 1k32_A 459 MEGRK 463 (1045)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 99876
No 239
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=70.96 E-value=17 Score=31.93 Aligned_cols=106 Identities=14% Similarity=0.183 Sum_probs=60.0
Q ss_pred ceeeeEEe-CCeEEEEecC-CcEEEEEcCCCCCCCCCCCeEEE---cCCCCCceeeeeee-CCEEEE-----EE------
Q psy2153 17 TALPPVHV-QGRVVCALAD-GSVAIFRRGPDGQWDLSKYHTVT---LGLPHHSVRSLAAV-YNKVWC-----GY------ 79 (325)
Q Consensus 17 sVl~I~~~-~~~VfVgLAN-GtLaVF~R~~~g~WD~~~~~~I~---LG~~~~PV~cml~v-~~~LW~-----g~------ 79 (325)
.+..+... ++++|++-.. +.|.+|+.+ |.. ..+. -|.+...+..+..- ++++|+ |.
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~--g~~-----~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~ 159 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDAD--GQA-----HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQG 159 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT--SCE-----EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGS
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCC--CCE-----EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccc
Confidence 34555543 5678877643 578888643 321 1111 11111223444443 478999 33
Q ss_pred --------CCeEEEEcCCCC--ceeEecCCCCCceeEEEEeCCe--EEEEEeCC-----CeEEEEecCccc
Q psy2153 80 --------KNKIHVVDPKSL--KSFDAHPRRESQVRQMTWAGDG--VWVSIRLD-----STLRMYNAHTYQ 133 (325)
Q Consensus 80 --------gnkI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~s-----s~IrL~ha~T~e 133 (325)
.+.|+.+++++. +.+. .....+.++.+.+| +|++-+.. ..|+.|+..+-.
T Consensus 160 ~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 160 CPADPELAHHSVYRLPPDGSPLQRMA----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CCCCCSSSCEEEEEECSSSCCCEEEE----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cccccccCCCeEEEEcCCCCcEEEEe----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 357999998765 3332 22455677877554 77766552 678888876543
No 240
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=70.90 E-value=37 Score=32.60 Aligned_cols=113 Identities=15% Similarity=0.100 Sum_probs=60.7
Q ss_pred CCceeeeEEe-CCeE--EEEecCCcEEEEEcCCCCCCCCCCCeEEEcCC-CCCceeeeeeeCCEEE-EEEC---C---eE
Q psy2153 15 LDTALPPVHV-QGRV--VCALADGSVAIFRRGPDGQWDLSKYHTVTLGL-PHHSVRSLAAVYNKVW-CGYK---N---KI 83 (325)
Q Consensus 15 ~dsVl~I~~~-~~~V--fVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~-~~~PV~cml~v~~~LW-~g~g---n---kI 83 (325)
+.+|.++... +++- |++-.+|++-||.- +......+-. +...+.......|++. .+.. + +|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~--------~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLY--------DGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEE--------ETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEE--------cCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEE
Confidence 4467777764 4443 33444777777763 1122333322 1135666555555543 3332 2 58
Q ss_pred EEEcC--CCCceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceee
Q psy2153 84 HVVDP--KSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 84 ~VIn~--~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
+.++. ..... .........+..+..+|+++.++-.....+.+||.++.+..+
T Consensus 93 ~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~ 146 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE 146 (582)
T ss_dssp EEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE
Confidence 88887 43322 333322333445666677766665555556699998877544
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=69.15 E-value=10 Score=39.03 Aligned_cols=86 Identities=16% Similarity=0.206 Sum_probs=62.8
Q ss_pred eEEEcCCCCCceeeeeeeC-CEEEEEEC--CeEEEEcCCCCc-----------eeEecCCCCCceeEEEEeCCe-EEEEE
Q psy2153 54 HTVTLGLPHHSVRSLAAVY-NKVWCGYK--NKIHVVDPKSLK-----------SFDAHPRRESQVRQMTWAGDG-VWVSI 118 (325)
Q Consensus 54 ~~I~LG~~~~PV~cml~v~-~~LW~g~g--nkI~VIn~~Tlk-----------sf~~~~~~~~~V~~Ma~~G~G-VWiS~ 118 (325)
..|++|. +|--....=+ ..++++.. |+|.|||..+++ ...+.........+++-+++| .|++.
T Consensus 271 ~~Ipvg~--~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 271 RYIPIAN--NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSL 348 (595)
T ss_dssp EEEEEES--SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEE
T ss_pred EEEecCC--CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEE
Confidence 3566665 4543322223 46888876 779999999873 234455556778999998655 77888
Q ss_pred eCCCeEEEEecCc----------cceeeeeecc
Q psy2153 119 RLDSTLRMYNAHT----------YQHLQDVDIE 141 (325)
Q Consensus 119 ~~ss~IrL~ha~T----------~e~LqdIdIa 141 (325)
-.+++|-.||..+ .+.++.+|+.
T Consensus 349 ~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~ 381 (595)
T 1fwx_A 349 FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH 381 (595)
T ss_dssp TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS
T ss_pred ecCCcEEEEEhhHhhhhhcccccceeEEEeecc
Confidence 9999999999998 7889999985
No 242
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=69.06 E-value=47 Score=34.94 Aligned_cols=113 Identities=10% Similarity=0.026 Sum_probs=68.1
Q ss_pred ceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCC-ceeeeeeeCC-EEEEEE-CCeEE-EEcCCC
Q psy2153 17 TALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH-SVRSLAAVYN-KVWCGY-KNKIH-VVDPKS 90 (325)
Q Consensus 17 sVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~-PV~cml~v~~-~LW~g~-gnkI~-VIn~~T 90 (325)
.|.++.+. +++.++..++|+|.+++.. ......+..... .++.+...++ .|..++ .++++ +++..+
T Consensus 297 ~v~~~~~S~pdG~~la~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVSRGQAFIQDVS--------GTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEETTEEEEECTT--------SSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT
T ss_pred ccceeeecCCCCCEEEEEEcCEEEEEcCC--------CCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCC
Confidence 57777776 4554444557777776532 222333432223 5666655532 344333 45688 888877
Q ss_pred CceeEecCCCCCceeEEEEeCCeEEEEE-eCCCeEEEEecCccceeeee
Q psy2153 91 LKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDV 138 (325)
Q Consensus 91 lksf~~~~~~~~~V~~Ma~~G~GVWiS~-~~ss~IrL~ha~T~e~LqdI 138 (325)
.+.-... .....+..++++.+|=++++ ..+..|++||.++.+..+.+
T Consensus 369 ~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 369 GKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp CCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 6322222 33467889999877755543 45679999999998866554
No 243
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=67.95 E-value=7.6 Score=38.26 Aligned_cols=117 Identities=8% Similarity=0.060 Sum_probs=69.8
Q ss_pred CceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCC---ceeeeeeeC--CEEEEEEC---------
Q psy2153 16 DTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHH---SVRSLAAVY--NKVWCGYK--------- 80 (325)
Q Consensus 16 dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~---PV~cml~v~--~~LW~g~g--------- 80 (325)
..+.++.+. ++++++.-.+|+|.+++...+. ... .+..... .|+++..-. ..|-.++.
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~------~~~-~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNT------STV-LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCC------CEE-EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCc------EEE-EeccccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 344555554 3443333467777776543211 111 2221111 366665553 35655554
Q ss_pred -CeEEEEcCCCCc--eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 81 -NKIHVVDPKSLK--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 81 -nkI~VIn~~Tlk--sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
..|++.|.++.+ .+.........+..++++.+|=++++..+..|++||..+.+..+-..
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEEC
T ss_pred eeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEec
Confidence 679999988873 34443333455888889988878888777899999999877655443
No 244
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=67.30 E-value=42 Score=33.10 Aligned_cols=71 Identities=10% Similarity=-0.026 Sum_probs=43.0
Q ss_pred ceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEECCeEEEEcCCCCc
Q psy2153 17 TALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYKNKIHVVDPKSLK 92 (325)
Q Consensus 17 sVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~gnkI~VIn~~Tlk 92 (325)
.|.++.+. +++.++..++|+|.+++...... +....+-....+++++... +..|-.++.++|++++..+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~-----~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGK-----AAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCST-----TSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCc-----ceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCC
Confidence 36667665 55555555568999998544210 0111222222567766555 346777888899999998873
No 245
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=65.63 E-value=11 Score=37.63 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=50.2
Q ss_pred CCEEEEEEC--CeEEEEcCCCC-------ceeE---ecCC-CCCceeEEEEeCCeEEEEEeCC------CeEEEEecCcc
Q psy2153 72 YNKVWCGYK--NKIHVVDPKSL-------KSFD---AHPR-RESQVRQMTWAGDGVWVSIRLD------STLRMYNAHTY 132 (325)
Q Consensus 72 ~~~LW~g~g--nkI~VIn~~Tl-------ksf~---~~~~-~~~~V~~Ma~~G~GVWiS~~~s------s~IrL~ha~T~ 132 (325)
.+.||+.+. ++|+|||+++. |..+ +... ..+.-.++....+|++|+...+ ..|-++|.+|+
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCC
Confidence 478999888 45999999876 2332 1111 1123445666777899988888 68999999999
Q ss_pred ceeeeeecc
Q psy2153 133 QHLQDVDIE 141 (325)
Q Consensus 133 e~LqdIdIa 141 (325)
+.+..+.+.
T Consensus 175 ~v~~~~~~~ 183 (462)
T 2ece_A 175 EPLGKWEID 183 (462)
T ss_dssp CEEEECCSB
T ss_pred eEEEEEccC
Confidence 999888654
No 246
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.99 E-value=53 Score=30.18 Aligned_cols=108 Identities=12% Similarity=0.142 Sum_probs=59.6
Q ss_pred CceeeeEEe---CCeEEEEecCC----cEEEEEcCCCCCCCCCCCeEEEcCC--------CCCceeeeeee----CCEEE
Q psy2153 16 DTALPPVHV---QGRVVCALADG----SVAIFRRGPDGQWDLSKYHTVTLGL--------PHHSVRSLAAV----YNKVW 76 (325)
Q Consensus 16 dsVl~I~~~---~~~VfVgLANG----tLaVF~R~~~g~WD~~~~~~I~LG~--------~~~PV~cml~v----~~~LW 76 (325)
..|.+|... ++++||+...| -|..+ .+.+..|..-... ..+.. ....|.++..- .+.||
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP-PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC-CCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc-ccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 478888886 68999999888 45443 3455578532211 00110 01236666554 58999
Q ss_pred EEEC-CeEEEEcCCCCceeEec------C-------------CCCCceeEEEEe---CCeEEEEEeCCCeEEE
Q psy2153 77 CGYK-NKIHVVDPKSLKSFDAH------P-------------RRESQVRQMTWA---GDGVWVSIRLDSTLRM 126 (325)
Q Consensus 77 ~g~g-nkI~VIn~~Tlksf~~~------~-------------~~~~~V~~Ma~~---G~GVWiS~~~ss~IrL 126 (325)
++.. +-|+.-+-.. ++++.. + .....|..|+.. ...+|++...+...+.
T Consensus 133 ~g~~~ggl~~S~DgG-~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 133 AGTSPQGLFRSTDHG-ASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEETTEEEEESSTT-SBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred EEecCCcEEEEcCCC-CCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 9864 5576653322 233211 1 112457778775 3569998766544443
No 247
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=62.19 E-value=16 Score=36.19 Aligned_cols=106 Identities=11% Similarity=0.119 Sum_probs=65.4
Q ss_pred eeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCC---CceeeeeeeC--CEEEEEEC----------CeE
Q psy2153 20 PPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPH---HSVRSLAAVY--NKVWCGYK----------NKI 83 (325)
Q Consensus 20 ~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~---~PV~cml~v~--~~LW~g~g----------nkI 83 (325)
++.+. +++++++-.+|+|.+++... |. ...+ +.... ..+.+...-. ..|-.++. ..|
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~-g~-----~~~~-~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i 92 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIET-GQ-----SYTI-LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY 92 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSS-CC-----EEEE-ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCC-Cc-----EEEE-EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE
Confidence 34443 44555555788888887433 21 1111 11100 1255554442 35655554 579
Q ss_pred EEEcCCCCce---eEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceee
Q psy2153 84 HVVDPKSLKS---FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 84 ~VIn~~Tlks---f~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
+++|.++.+. .... ..+..++++.+|=|+++..+..|++||..+.+..+
T Consensus 93 ~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 93 YIYDLSNGEFVRGNELP----RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EEEETTTTEECCSSCCC----SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred EEEECCCCccccceecC----cccccceECCCCCEEEEEECCeEEEEeCCCCCcEE
Confidence 9999888744 2221 35788999999988888889999999998876544
No 248
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=62.07 E-value=80 Score=34.66 Aligned_cols=137 Identities=18% Similarity=0.140 Sum_probs=71.2
Q ss_pred CCCCccceeeCCC--ceeeeEE--eC--CeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee---CCE
Q psy2153 4 PHPTPYPLNKILD--TALPPVH--VQ--GRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV---YNK 74 (325)
Q Consensus 4 ~~~~~L~~IkL~d--sVl~I~~--~~--~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v---~~~ 74 (325)
|+.+.++...|++ .+.+|+. .+ -++++||.||.++.|.-+.. .-.+...+...||. .|++ |..+ +..
T Consensus 590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~-tg~l~d~r~~~LG~--~pv~-L~~~~~~~~~ 665 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIE-TGLLSDRKKVTLGT--QPTV-LRTFRSLSTT 665 (1158)
T ss_dssp TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTT-TCCEEEEEEEECCS--SCCE-EEEEESSSCE
T ss_pred CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCC-CCccccceeEEcCC--CceE-EEEEeeCCce
Confidence 4556666777755 4444443 33 37999999999999975431 22345557789997 6764 3222 222
Q ss_pred EEEEECCe-EEEEcCCCCceeEecCCCCCceeEEEEe-----CCeEEEEEeCCCeEEEEecCccc--eeeeeecchhhhh
Q psy2153 75 VWCGYKNK-IHVVDPKSLKSFDAHPRRESQVRQMTWA-----GDGVWVSIRLDSTLRMYNAHTYQ--HLQDVDIEPYVSK 146 (325)
Q Consensus 75 LW~g~gnk-I~VIn~~Tlksf~~~~~~~~~V~~Ma~~-----G~GVWiS~~~ss~IrL~ha~T~e--~LqdIdIa~~v~~ 146 (325)
--.+++++ -.+...+ +.|..++-....+.+++.- ..|+- .. .+..||++...+++ +.+.|.+.-.+++
T Consensus 666 ~V~a~s~rp~liy~~~--~~l~~s~l~~~~v~~~~~F~se~~~~g~v-~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprr 741 (1158)
T 3ei3_A 666 NVFACSDRPTVIYSSN--HKLVFSNVNLKEVNYMCPLNSDGYPDSLA-LA-NNSTLTIGTIDEIQKLHIRTVPLYESPRK 741 (1158)
T ss_dssp EEEEESSSCEEEEESS--SSEEEEEBSSSCCCEEEEECCSSSTTEEE-EE-CSSCEEEEEECCSSSEEEEEEECSSEEEE
T ss_pred eEEEECCCCEEEEEcC--CceEEeccChHHhceEeccCcccCCCcEE-EE-cCCceEEEEecccCCeeEEEEeCCCCceE
Confidence 22333333 2222222 2344444333445555543 23443 22 23447777665443 4455555544444
Q ss_pred hc
Q psy2153 147 ML 148 (325)
Q Consensus 147 ~l 148 (325)
+.
T Consensus 742 i~ 743 (1158)
T 3ei3_A 742 IC 743 (1158)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=61.42 E-value=85 Score=27.56 Aligned_cols=117 Identities=8% Similarity=-0.030 Sum_probs=67.4
Q ss_pred CCccceeeCCCceeeeEEe-CCeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee-CCEEEEEEC--
Q psy2153 6 PTPYPLNKILDTALPPVHV-QGRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV-YNKVWCGYK-- 80 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~-~~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v-~~~LW~g~g-- 80 (325)
.+.+.++........+... ++++|++- .+|+|..|+.+ |.. ...+.++. ....|..- +++||++..
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~--g~~----~~~~~~~~---~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPD--GNQ----QIHATVEG---KVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTT--CCE----EEEEECSS---EEEEEEECTTSCEEEEEECT
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCC--Cce----EEEEeCCC---CceeEEEcCCCcEEEEeccC
Confidence 4556666555666777773 67888885 78899888643 321 12344442 34455544 478999883
Q ss_pred C--eEEEEcCCCCc--eeEecCCCCCceeEEEE-eCCeEEEEEeCCCeEEEEecCcc
Q psy2153 81 N--KIHVVDPKSLK--SFDAHPRRESQVRQMTW-AGDGVWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 81 n--kI~VIn~~Tlk--sf~~~~~~~~~V~~Ma~-~G~GVWiS~~~ss~IrL~ha~T~ 132 (325)
+ +|+.+++.+.+ .+...+ .......++. .+.-++++-.....|..+|..+.
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CcceEEEEcCCCCeEEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 2 48888876652 222112 1222233332 23336666556678888887653
No 250
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=60.81 E-value=53 Score=33.02 Aligned_cols=110 Identities=6% Similarity=0.057 Sum_probs=65.8
Q ss_pred eeeeEEeCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCc--eee--eeee--CCEEEEEEC----------C
Q psy2153 18 ALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRS--LAAV--YNKVWCGYK----------N 81 (325)
Q Consensus 18 Vl~I~~~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~P--V~c--ml~v--~~~LW~g~g----------n 81 (325)
..++.+..+.-++..++|+|.+|+-..+. ...+--+..... +.. .... +..|..++. .
T Consensus 19 ~~~~~w~~dg~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQENNILVFNAEYGN------SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCEEECSSSEEEEEETTEEEEEETTTCC------EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccEECCCCcEEEEcCCcEEEEECCCCc------eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 44566664433333359999999854432 111111111011 100 1111 245655555 5
Q ss_pred eEEEEcCCCCc--eeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceee
Q psy2153 82 KIHVVDPKSLK--SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 136 (325)
Q Consensus 82 kI~VIn~~Tlk--sf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~Lq 136 (325)
.+++.|.++.+ .+..++ ..+...+++.+|=|+++..+..|++|+..+.+..+
T Consensus 93 ~~~~~d~~~~~~~~l~~~~---~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIP---NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEEEEETTTTEECCSSCCC---TTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE
T ss_pred EEEEEECCCCcEEEcccCC---CcceeeEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 67899998873 333333 56889999999999999999999999998876543
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=59.81 E-value=81 Score=26.80 Aligned_cols=107 Identities=7% Similarity=0.004 Sum_probs=67.6
Q ss_pred ceeeeEEe--CCeEEEEec-CCcEEEEEcCCCCCCCCCCCeE-EEcCCCCCceeeeeee--CCEEEEEEC----CeEEEE
Q psy2153 17 TALPPVHV--QGRVVCALA-DGSVAIFRRGPDGQWDLSKYHT-VTLGLPHHSVRSLAAV--YNKVWCGYK----NKIHVV 86 (325)
Q Consensus 17 sVl~I~~~--~~~VfVgLA-NGtLaVF~R~~~g~WD~~~~~~-I~LG~~~~PV~cml~v--~~~LW~g~g----nkI~VI 86 (325)
....|... .+++|++-. +++|.+|+.+ |. ..+. +..+. ..| +.+..- +++||.+.. ++|+++
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~--g~----~~~~~~~~~~-~~P-~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMD--GT----QRRVLFDTGL-VNP-RGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETT--SC----SCEEEECSSC-SSE-EEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcC--CC----CEEEEEECCC-CCc-cEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 45666664 468888754 5688888753 32 1122 22231 244 444443 578988774 479888
Q ss_pred cCCCC--ceeEecCCCCCceeEEEEe--CCeEEEEEeCCCeEEEEecCccc
Q psy2153 87 DPKSL--KSFDAHPRRESQVRQMTWA--GDGVWVSIRLDSTLRMYNAHTYQ 133 (325)
Q Consensus 87 n~~Tl--ksf~~~~~~~~~V~~Ma~~--G~GVWiS~~~ss~IrL~ha~T~e 133 (325)
+.+.. +.+. .......+.|+.+ +.-+|++-.....|+.||..+.+
T Consensus 152 ~~dg~~~~~~~--~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 152 HMDGTNRRILA--QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp ETTSCCCEEEE--CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred ecCCCCcEEEE--ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 86543 2221 2233567788887 45699999999999999988654
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=57.92 E-value=1e+02 Score=27.48 Aligned_cols=114 Identities=10% Similarity=0.000 Sum_probs=68.9
Q ss_pred eeeEEe--CCeEEEEecC--CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEEC--CeEEEEcCCC
Q psy2153 19 LPPVHV--QGRVVCALAD--GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPKS 90 (325)
Q Consensus 19 l~I~~~--~~~VfVgLAN--GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~g--nkI~VIn~~T 90 (325)
..|... ++++|++-.. +.|.++.- +|. ..+.+.-..-..| +.|..- +++||.+.. ++|.+++.+.
T Consensus 123 ~~iavdp~~g~ly~~d~~~~~~I~~~~~--dG~----~~~~~~~~~~~~P-~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 123 RAIVVDPVHGFMYWTDWGTPAKIKKGGL--NGV----DIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEET--TSC----CEEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEeCCCCCEEEEEccCCCCeEEEEcC--CCC----CeEEEEECCCCCc-eEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 344443 5667776542 56666653 332 1122211111123 233332 578877664 4799999865
Q ss_pred C--ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 91 L--KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 91 l--ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
. +.|............|+..++.+|++-.....|..+|..+.+.++.|.
T Consensus 196 ~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 196 GNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp CSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 4 344322223355677888889999999999999999998888776664
No 253
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=54.78 E-value=24 Score=35.18 Aligned_cols=61 Identities=10% Similarity=0.147 Sum_probs=38.4
Q ss_pred EEEEecCCcEEEEEcCCCCCCC---CCCCeEEEcCCCCCceeeeeeeC--CEEEEEECCeEEEEcC
Q psy2153 28 VVCALADGSVAIFRRGPDGQWD---LSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDP 88 (325)
Q Consensus 28 VfVgLANGtLaVF~R~~~g~WD---~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~gnkI~VIn~ 88 (325)
+|+|..+|+|.=......+.|+ .-....+.+..+.+||+.|.... +.|+++++++|.=|..
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~vpv 489 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPL 489 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEEES
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEEEH
Confidence 9999999976544433333332 22234567764458999997764 6899999999876543
No 254
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=54.56 E-value=1.7e+02 Score=29.01 Aligned_cols=101 Identities=15% Similarity=0.120 Sum_probs=63.2
Q ss_pred CeEEEEecCC-------cEEEEEcCCCCCCCC-CCCeEEEcCCCCCceeeeeee--CCEEEEEEC--CeEEEEcCC----
Q psy2153 26 GRVVCALADG-------SVAIFRRGPDGQWDL-SKYHTVTLGLPHHSVRSLAAV--YNKVWCGYK--NKIHVVDPK---- 89 (325)
Q Consensus 26 ~~VfVgLANG-------tLaVF~R~~~g~WD~-~~~~~I~LG~~~~PV~cml~v--~~~LW~g~g--nkI~VIn~~---- 89 (325)
+++||+--++ .+.+|.|..+|.|.. .....+.-+. +|. .+... ++.||++.. ++|+.++++
T Consensus 205 ~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~--~p~-giavdp~~g~LYvtd~~~g~V~r~d~~~~~~ 281 (496)
T 3kya_A 205 EYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK--QCN-GATIHPINGELYFNSYEKGQVFRLDLVDYFK 281 (496)
T ss_dssp CEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES--CCC-CEEECTTTCCEEEEETTTTEEEEECHHHHHH
T ss_pred CEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC--Cce-EEEEcCCCCeEEEEECCCCEEEEEecccccc
Confidence 3599998876 388898888888852 1113444333 454 33333 478987665 459999987
Q ss_pred ---CCce-----------e-E-ecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEec
Q psy2153 90 ---SLKS-----------F-D-AHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNA 129 (325)
Q Consensus 90 ---Tlks-----------f-~-~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha 129 (325)
+.+. + + ........-+.|+.+..| +|++-.....|+.++.
T Consensus 282 ~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 282 TIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp HHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 3321 1 1 111122345788888655 8999988899988553
No 255
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=53.57 E-value=51 Score=29.74 Aligned_cols=109 Identities=12% Similarity=0.083 Sum_probs=61.4
Q ss_pred CCceeeeEE-eCCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcC-CC-CCceeeeeee-CCEEEEEECCe-EEEEcCC
Q psy2153 15 LDTALPPVH-VQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLG-LP-HHSVRSLAAV-YNKVWCGYKNK-IHVVDPK 89 (325)
Q Consensus 15 ~dsVl~I~~-~~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG-~~-~~PV~cml~v-~~~LW~g~gnk-I~VIn~~ 89 (325)
+..+..+.. .++++|++-.+|.+.+...+.+..|..- ..+ .+ ...+..+... ++++|++..+- |+ ...+
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~D 277 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGEL-----LSPLRRNSVGFLDLAYRTPNEVWLAGGAGALL-CSQD 277 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCC-----BCTTSSCCSCEEEEEESSSSCEEEEESTTCEE-EESS
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEec-----cCCcccCCcceEEEEecCCCEEEEEeCCCeEE-EeCC
Confidence 345666665 3678898888888655432334467532 111 01 1346666555 46899876654 53 3444
Q ss_pred CCceeEecC---CCCCceeEEEEeCCeEEEEEeCCCeEEEEec
Q psy2153 90 SLKSFDAHP---RRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 129 (325)
Q Consensus 90 Tlksf~~~~---~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha 129 (325)
..++++... .....+..++..+.+.+++.-.+.+|.-++.
T Consensus 278 gG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 278 GGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp TTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 345554322 1135677777655566667777776665553
No 256
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=53.19 E-value=29 Score=30.25 Aligned_cols=55 Identities=16% Similarity=0.366 Sum_probs=34.1
Q ss_pred eEEEEcCCCCceeEecCCCCCceeEEEEeCCe--EEEEEeC--------------------------CCeEEEEecCccc
Q psy2153 82 KIHVVDPKSLKSFDAHPRRESQVRQMTWAGDG--VWVSIRL--------------------------DSTLRMYNAHTYQ 133 (325)
Q Consensus 82 kI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~G--VWiS~~~--------------------------ss~IrL~ha~T~e 133 (325)
+|++++.++.+........ . +..++++.+| +.++... ...|++||..+.+
T Consensus 86 ~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 4999998877322222212 2 8889997555 4433322 3679999998887
Q ss_pred eeeee
Q psy2153 134 HLQDV 138 (325)
Q Consensus 134 ~LqdI 138 (325)
.++.+
T Consensus 164 ~~~~l 168 (347)
T 2gop_A 164 VIEEF 168 (347)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 64444
No 257
>3uky_C Nuclear CAP-binding protein complex subunit 1; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding; 2.35A {Saccharomyces cerevisiae}
Probab=51.02 E-value=3.7 Score=26.11 Aligned_cols=9 Identities=56% Similarity=0.863 Sum_probs=7.4
Q ss_pred CCccccccc
Q psy2153 313 GEGYIDFRI 321 (325)
Q Consensus 313 GeGy~dfr~ 321 (325)
-|||.|||-
T Consensus 15 ddgYrDfrP 23 (32)
T 3uky_C 15 DENYRDFRP 23 (32)
T ss_pred ccccccccc
Confidence 489999984
No 258
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=50.62 E-value=12 Score=32.44 Aligned_cols=70 Identities=11% Similarity=0.181 Sum_probs=44.9
Q ss_pred EEECCeEEEEcCCCCceeEecC------CCCCceeEEEE--eCCeEEEEE-------------eCCCeEEEEecCcccee
Q psy2153 77 CGYKNKIHVVDPKSLKSFDAHP------RRESQVRQMTW--AGDGVWVSI-------------RLDSTLRMYNAHTYQHL 135 (325)
Q Consensus 77 ~g~gnkI~VIn~~Tlksf~~~~------~~~~~V~~Ma~--~G~GVWiS~-------------~~ss~IrL~ha~T~e~L 135 (325)
+.||..|.+.+..|.+-+-.|. ....+|++.-. +....|+-. +.+.+|||+|..|.+.|
T Consensus 7 V~~Gs~I~L~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H~~T~~~L 86 (187)
T 1t9f_A 7 VTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFL 86 (187)
T ss_dssp CBTTCEEEEEETTTCCEEEEEEEECSSSSCCEEEEEESCSSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEETTTCCEE
T ss_pred EEeCCEEEEEECCCCcccEeCCccCCCCCCceEEEEECCCCCCCCEEEEEecCCCccCCCCEeccCCEEEEEECCCCCCE
Confidence 4577888888877763222221 12244777432 123477653 46678999999999999
Q ss_pred eeeecchhhhh
Q psy2153 136 QDVDIEPYVSK 146 (325)
Q Consensus 136 qdIdIa~~v~~ 146 (325)
..=|+++++++
T Consensus 87 hsh~~~~p~s~ 97 (187)
T 1t9f_A 87 HSHHFTAPLSK 97 (187)
T ss_dssp EEEEEECSSCT
T ss_pred eECCcCCCCCC
Confidence 88887776653
No 259
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=49.97 E-value=33 Score=32.98 Aligned_cols=66 Identities=14% Similarity=0.058 Sum_probs=40.6
Q ss_pred CceeeeeeeC--CEEEEEECC---eEEEEcCCCCceeEecCCCCCceeEEE--------EeCCe-EEEEEeCCCeEEEEe
Q psy2153 63 HSVRSLAAVY--NKVWCGYKN---KIHVVDPKSLKSFDAHPRRESQVRQMT--------WAGDG-VWVSIRLDSTLRMYN 128 (325)
Q Consensus 63 ~PV~cml~v~--~~LW~g~gn---kI~VIn~~Tlksf~~~~~~~~~V~~Ma--------~~G~G-VWiS~~~ss~IrL~h 128 (325)
..+....... ..|+.+..+ +|+++|.++.+.- .-......+...+ ++.+| ++++...+.+++||+
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 4455554443 456655443 6999999887332 2222233444444 66554 777888899999999
Q ss_pred c
Q psy2153 129 A 129 (325)
Q Consensus 129 a 129 (325)
.
T Consensus 274 ~ 274 (582)
T 3o4h_A 274 D 274 (582)
T ss_dssp T
T ss_pred E
Confidence 8
No 260
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=49.68 E-value=1.4e+02 Score=26.57 Aligned_cols=116 Identities=16% Similarity=0.114 Sum_probs=64.4
Q ss_pred CceeeeEEeC-C-eEEEE-ecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeC--CEEEEEEC--CeEEEEc-
Q psy2153 16 DTALPPVHVQ-G-RVVCA-LADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY--NKVWCGYK--NKIHVVD- 87 (325)
Q Consensus 16 dsVl~I~~~~-~-~VfVg-LANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~--~~LW~g~g--nkI~VIn- 87 (325)
..+.++.+.. + ++|++ ..+++|.+|+.+.+|.. .....+.+......++.+.... ..||+++. +.|.+++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 3566666653 3 47765 34678999986533321 1111233211113456666553 47899885 6788865
Q ss_pred -CCCCc------eeEecCCC--C-C-------ceeEEE-EeCCe--EEEEEeCCC-----eEEEEecC-ccc
Q psy2153 88 -PKSLK------SFDAHPRR--E-S-------QVRQMT-WAGDG--VWVSIRLDS-----TLRMYNAH-TYQ 133 (325)
Q Consensus 88 -~~Tlk------sf~~~~~~--~-~-------~V~~Ma-~~G~G--VWiS~~~ss-----~IrL~ha~-T~e 133 (325)
+++.+ .+...+.. . . .+..++ .+.+| +|++-+... .|++|+.. +.+
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 223 DPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp CTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred eCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 43432 12222211 1 2 477888 77555 787776655 89999975 444
No 261
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=48.17 E-value=1.4e+02 Score=26.11 Aligned_cols=105 Identities=12% Similarity=0.091 Sum_probs=57.0
Q ss_pred eEEeCCeEEEEec-------CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCce--eeeeeeCCEEEEEEC-------CeEE
Q psy2153 21 PVHVQGRVVCALA-------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV--RSLAAVYNKVWCGYK-------NKIH 84 (325)
Q Consensus 21 I~~~~~~VfVgLA-------NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV--~cml~v~~~LW~g~g-------nkI~ 84 (325)
.+..++++|+-=. ..++.+|+-.. +.|.. +.....|- .++..++++|++--| +.++
T Consensus 154 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~-------~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 225 (318)
T 2woz_A 154 VISHNGMIYCLGGKTDDKKCTNRVFIYNPKK-GDWKD-------LAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVE 225 (318)
T ss_dssp EEEETTEEEEECCEESSSCBCCCEEEEETTT-TEEEE-------ECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred EEEECCEEEEEcCCCCCCCccceEEEEcCCC-CEEEE-------CCCCCCCcccceEEEECCEEEEEcCcCCCCccceEE
Confidence 3446777766321 12477776443 34642 11111222 356778999988543 5689
Q ss_pred EEcCCCCceeEecCCCC-CceeEEEEeCCeEEEEEe--------------CCCeEEEEecCccc
Q psy2153 85 VVDPKSLKSFDAHPRRE-SQVRQMTWAGDGVWVSIR--------------LDSTLRMYNAHTYQ 133 (325)
Q Consensus 85 VIn~~Tlksf~~~~~~~-~~V~~Ma~~G~GVWiS~~--------------~ss~IrL~ha~T~e 133 (325)
++|+++.+..++.+-+. ..-..++..+..+++.-- ....+..||.++.+
T Consensus 226 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 226 AFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 99999885443332111 122245566666776522 13457777777654
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=44.84 E-value=1.9e+02 Score=26.68 Aligned_cols=69 Identities=7% Similarity=-0.027 Sum_probs=50.1
Q ss_pred eCCEEEEEEC--CeEEEEcCCCCceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 71 VYNKVWCGYK--NKIHVVDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 71 v~~~LW~g~g--nkI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
.+++||.+-. ++|.+++........+-........-|+..++.+|++-.....|+.+|..+.+.++.|.
T Consensus 256 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 256 AGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp GGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 3678877654 56999997654222222222455677888989999999999999999988888777765
No 263
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=40.52 E-value=1.8e+02 Score=25.04 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=56.4
Q ss_pred eeEEeCCeEEEEe------cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCc--eeeeeeeCCEEEEEEC-------CeEE
Q psy2153 20 PPVHVQGRVVCAL------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRSLAAVYNKVWCGYK-------NKIH 84 (325)
Q Consensus 20 ~I~~~~~~VfVgL------ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~P--V~cml~v~~~LW~g~g-------nkI~ 84 (325)
+.+..++++|+-= ...++.+|+-.. +.|. .+.....| -.++..++++|++--| +.|+
T Consensus 154 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~-------~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 225 (301)
T 2vpj_A 154 GLVVASGVIYCLGGYDGLNILNSVEKYDPHT-GHWT-------NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVE 225 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEE-------EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred eEEEECCEEEEECCCCCCcccceEEEEeCCC-CcEE-------eCCCCCcccccceEEEECCEEEEEeCCCCCcccceEE
Confidence 3444567776641 123566776433 3563 12221122 2356677899988554 5699
Q ss_pred EEcCCCCceeEecCCC-CCceeEEEEeCCeEEEEEeCC-----CeEEEEecCccc
Q psy2153 85 VVDPKSLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 133 (325)
Q Consensus 85 VIn~~Tlksf~~~~~~-~~~V~~Ma~~G~GVWiS~~~s-----s~IrL~ha~T~e 133 (325)
++|+++.+..++.+-+ ...-..++..+..+++.--.+ ..+..||.++.+
T Consensus 226 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 226 AYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 9999988433332211 111223455566677654322 356777776544
No 264
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=40.27 E-value=1.9e+02 Score=25.30 Aligned_cols=60 Identities=20% Similarity=0.164 Sum_probs=31.4
Q ss_pred cCCcEEEEEcCCCC---C--CCCCCCeEEEcCC-CCCceeeeeee--CCEEEEEECC-eEEEEcCCCCc
Q psy2153 33 ADGSVAIFRRGPDG---Q--WDLSKYHTVTLGL-PHHSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLK 92 (325)
Q Consensus 33 ANGtLaVF~R~~~g---~--WD~~~~~~I~LG~-~~~PV~cml~v--~~~LW~g~gn-kI~VIn~~Tlk 92 (325)
.||+-++|....+| . ||++.-+...+-. +..++...... +..|..+..+ .|+++|..+.+
T Consensus 45 pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 45 RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE 113 (388)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 35655555544334 1 3555445555532 11222222222 3567766654 79999999883
No 265
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=39.12 E-value=2e+02 Score=27.22 Aligned_cols=117 Identities=12% Similarity=0.158 Sum_probs=71.9
Q ss_pred ceeeCCCc---eeeeEEeC--CeEEEEe-cCCcEEEEEcCCCCCCCCCCCeEEEc------CCCCCceeeeee----eCC
Q psy2153 10 PLNKILDT---ALPPVHVQ--GRVVCAL-ADGSVAIFRRGPDGQWDLSKYHTVTL------GLPHHSVRSLAA----VYN 73 (325)
Q Consensus 10 ~~IkL~ds---Vl~I~~~~--~~VfVgL-ANGtLaVF~R~~~g~WD~~~~~~I~L------G~~~~PV~cml~----v~~ 73 (325)
+.|.++.. .-|+.|.+ +++|++- .+|+|.+++...+...+ +.+ |.+......|.. -.+
T Consensus 4 ~~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~------~~~~~~s~~g~~~~~~sGl~~~~~D~~g 77 (334)
T 2p9w_A 4 DQIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN------VVIDGASSNGDGEQQMSGLSLLTHDNSK 77 (334)
T ss_dssp SEEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEE------ECCTTTCCSSCCSEEEEEEEESSSSSCC
T ss_pred ceEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE------EecCCccccCCCcceeeEEEEeccCCCC
Confidence 44555542 34677775 8898886 79999999743222111 222 332222345555 247
Q ss_pred EEEEE-E--------------CCeEEEEcCC---CCc-eeEec----CC--------CCCceeEEEEeCCe-EEEEEeCC
Q psy2153 74 KVWCG-Y--------------KNKIHVVDPK---SLK-SFDAH----PR--------RESQVRQMTWAGDG-VWVSIRLD 121 (325)
Q Consensus 74 ~LW~g-~--------------gnkI~VIn~~---Tlk-sf~~~----~~--------~~~~V~~Ma~~G~G-VWiS~~~s 121 (325)
+||+. - .+.|+.+|.. |-+ .+.+. .+ .......|+.+..| +|++-...
T Consensus 78 rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~ 157 (334)
T 2p9w_A 78 RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG 157 (334)
T ss_dssp EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES
T ss_pred cEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC
Confidence 99984 2 2569999988 552 22111 10 12347789998776 99988888
Q ss_pred -CeEEEEecCcc
Q psy2153 122 -STLRMYNAHTY 132 (325)
Q Consensus 122 -s~IrL~ha~T~ 132 (325)
+.|..++....
T Consensus 158 ~~~I~rV~pdG~ 169 (334)
T 2p9w_A 158 MPAIARVSADGK 169 (334)
T ss_dssp SCEEEEECTTSC
T ss_pred CCeEEEEeCCCC
Confidence 89998888765
No 266
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=37.87 E-value=2e+02 Score=24.98 Aligned_cols=108 Identities=10% Similarity=0.083 Sum_probs=57.0
Q ss_pred eeEEeCCeEEEEec------CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-------CeEEEE
Q psy2153 20 PPVHVQGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NKIHVV 86 (325)
Q Consensus 20 ~I~~~~~~VfVgLA------NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g-------nkI~VI 86 (325)
+.+..++++|+-=. ..++.+|+-.. ..|..-.+ +..+ .--.++..++++||+--| +.++++
T Consensus 163 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~----~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 163 GVAVLNRLLYAVGGFDGTNRLNSAECYYPER-NEWRMITA----MNTI-RSGAGVCVLHNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEEECCC----CSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEE
T ss_pred EEEEECCEEEEEeCCCCCCcCceEEEEeCCC-CeEeeCCC----CCCc-cccceEEEECCEEEEEeCCCCCCccceEEEE
Confidence 34445777776421 23577777433 35642211 1111 112356777999998554 679999
Q ss_pred cCCCCceeEecCCCC-CceeEEEEeCCeEEEEEe-----CCCeEEEEecCccc
Q psy2153 87 DPKSLKSFDAHPRRE-SQVRQMTWAGDGVWVSIR-----LDSTLRMYNAHTYQ 133 (325)
Q Consensus 87 n~~Tlksf~~~~~~~-~~V~~Ma~~G~GVWiS~~-----~ss~IrL~ha~T~e 133 (325)
|+++.+..++.+-+. ..-..++..+..+++.-- ....+.+||.++.+
T Consensus 237 d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 237 DVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred eCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 999984333322111 112245555666766532 13446677766544
No 267
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=37.26 E-value=2.2e+02 Score=25.19 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=50.9
Q ss_pred EEeCCeEEEE--ecCCcEEEEEcCC-CCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC------------CeEEEE
Q psy2153 22 VHVQGRVVCA--LADGSVAIFRRGP-DGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK------------NKIHVV 86 (325)
Q Consensus 22 ~~~~~~VfVg--LANGtLaVF~R~~-~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g------------nkI~VI 86 (325)
...++++|+. ....++.+|+-.. ...|..-.+ ++ +.+ .-=.++..++++||+--| +.++++
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~--~p-~~~-R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~y 91 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAA--FP-GGP-RDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKY 91 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCC--CT-TCC-CBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEE
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCC--CC-CCc-CccceEEEECCEEEEEcCCCCCCCccceeeccEEEE
Confidence 3448888883 4455788998653 456752211 00 011 111356777899987433 459999
Q ss_pred cCCCCceeEecCCC-CCce-eEEEEeCCeEEEEEe
Q psy2153 87 DPKSLKSFDAHPRR-ESQV-RQMTWAGDGVWVSIR 119 (325)
Q Consensus 87 n~~Tlksf~~~~~~-~~~V-~~Ma~~G~GVWiS~~ 119 (325)
|+.+.+.-.+.+-. ...- ..++..+.-+|+.--
T Consensus 92 d~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG 126 (357)
T 2uvk_A 92 NPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGG 126 (357)
T ss_dssp ETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEEC
T ss_pred eCCCCcEEECCCCCCcccccceEEEECCEEEEEeC
Confidence 99988433222211 1111 224456667776553
No 268
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=36.65 E-value=2.1e+02 Score=24.89 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=13.8
Q ss_pred CCEEE-EEECCeEEEEcCCCC
Q psy2153 72 YNKVW-CGYKNKIHVVDPKSL 91 (325)
Q Consensus 72 ~~~LW-~g~gnkI~VIn~~Tl 91 (325)
+..|. ++..++|++++..+.
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTC
T ss_pred CCEEEEEEcCCcEEEEECCCC
Confidence 35674 444457999998876
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=35.02 E-value=2.5e+02 Score=26.62 Aligned_cols=73 Identities=16% Similarity=0.279 Sum_probs=52.7
Q ss_pred CCEEEEEE--CCeEEEEcCCCCceeEecC-------CCCCceeEEEE---eCC-eEEEEEeC-------------CCeEE
Q psy2153 72 YNKVWCGY--KNKIHVVDPKSLKSFDAHP-------RRESQVRQMTW---AGD-GVWVSIRL-------------DSTLR 125 (325)
Q Consensus 72 ~~~LW~g~--gnkI~VIn~~Tlksf~~~~-------~~~~~V~~Ma~---~G~-GVWiS~~~-------------ss~Ir 125 (325)
.+++|+++ ...|.++++..-...++.- ++..++.-|.+ ... -+|+.... ...|.
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~ 103 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFH 103 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEE
Confidence 48999998 5779999998553333311 12346678888 334 59986553 67799
Q ss_pred EEecC---ccceeeeeecchhh
Q psy2153 126 MYNAH---TYQHLQDVDIEPYV 144 (325)
Q Consensus 126 L~ha~---T~e~LqdIdIa~~v 144 (325)
.||.. |.+.+..+|+....
T Consensus 104 ~~Dl~~~~tg~~~~~~dL~~~~ 125 (334)
T 2p9w_A 104 SFNLPLSENSKPVWSVNFEKVQ 125 (334)
T ss_dssp EEESSCCTTCCCSEEEESHHHH
T ss_pred EEcCCcCCCCCEEEEecCcccc
Confidence 99999 99999999997643
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=34.70 E-value=2.5e+02 Score=25.05 Aligned_cols=116 Identities=12% Similarity=0.107 Sum_probs=63.8
Q ss_pred CCceeeeEEe-CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEECC-eEEEEcCCCCc
Q psy2153 15 LDTALPPVHV-QGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN-KIHVVDPKSLK 92 (325)
Q Consensus 15 ~dsVl~I~~~-~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~gn-kI~VIn~~Tlk 92 (325)
...+.+|.+. ++.+||+=.+|.| ....+.+..|..... ....+..++..+...++++|++... .|+. ..+-.+
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~---~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTL---VLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCC---CCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCC---CCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCC
Confidence 4578888875 5678886677754 223344446853221 1122346788888878899986433 3433 333345
Q ss_pred eeEecCCC---CCceeEEEEe-CCeEEEEEeCCCeEEEEe-cCcccee
Q psy2153 93 SFDAHPRR---ESQVRQMTWA-GDGVWVSIRLDSTLRMYN-AHTYQHL 135 (325)
Q Consensus 93 sf~~~~~~---~~~V~~Ma~~-G~GVWiS~~~ss~IrL~h-a~T~e~L 135 (325)
+++..... ...+..++.. ...+|++...+...|-.| -+|.+.+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~ 157 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQAL 157 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEe
Confidence 55443211 1345666654 345666665555556665 3455444
No 271
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.51 E-value=2.8e+02 Score=25.69 Aligned_cols=102 Identities=12% Similarity=0.091 Sum_probs=60.4
Q ss_pred CeEEEEecCC--cEEEEEcCCCCCCCCCCCeEE-EcCC-CCCceeeeeee--CCEEEEEECC-eEEEEcCCCCc--eeEe
Q psy2153 26 GRVVCALADG--SVAIFRRGPDGQWDLSKYHTV-TLGL-PHHSVRSLAAV--YNKVWCGYKN-KIHVVDPKSLK--SFDA 96 (325)
Q Consensus 26 ~~VfVgLANG--tLaVF~R~~~g~WD~~~~~~I-~LG~-~~~PV~cml~v--~~~LW~g~gn-kI~VIn~~Tlk--sf~~ 96 (325)
+.+|++-.+| .|.+|++.. .|. +..+ .+.. .....+++..- ++.||++..+ +|+.+++++.. .+..
T Consensus 183 ~~l~~~d~~~~~~I~~~d~~~--~~~---~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~ 257 (409)
T 3hrp_A 183 QRVYSIGWEGTHTVYVYMKAS--GWA---PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQ 257 (409)
T ss_dssp SEEEEEBSSTTCEEEEEEGGG--TTC---EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEE
T ss_pred CcEEEEecCCCceEEEEEcCC--Cce---eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEec
Confidence 4677777655 788888643 232 1222 1111 11223455444 4789997764 59999998762 3311
Q ss_pred ---cCCCCCc-eeEEEEeC--CeEEEEEeCCCeEEEEecCcc
Q psy2153 97 ---HPRRESQ-VRQMTWAG--DGVWVSIRLDSTLRMYNAHTY 132 (325)
Q Consensus 97 ---~~~~~~~-V~~Ma~~G--~GVWiS~~~ss~IrL~ha~T~ 132 (325)
....... .+.|+.+. ..+|++-+....|+.|+....
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 1111111 12888874 569999999999999987643
No 272
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=34.20 E-value=2.3e+02 Score=24.45 Aligned_cols=67 Identities=18% Similarity=0.097 Sum_probs=40.3
Q ss_pred eeeeeCCEEEEEEC-------CeEEEEcCCCCceeEecCCCC-CceeEEEEeCCeEEEEEeC-----CCeEEEEecCccc
Q psy2153 67 SLAAVYNKVWCGYK-------NKIHVVDPKSLKSFDAHPRRE-SQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQ 133 (325)
Q Consensus 67 cml~v~~~LW~g~g-------nkI~VIn~~Tlksf~~~~~~~-~~V~~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~e 133 (325)
++..++++|++--| +.++++|+++.+..++.+-+. ..-..++..+..+++.--. ...+..||.++.+
T Consensus 195 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 195 GLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 56677899988644 679999999984433322111 1112344456677776542 2457777776644
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=33.07 E-value=2.4e+02 Score=24.48 Aligned_cols=118 Identities=12% Similarity=0.042 Sum_probs=66.7
Q ss_pred ccceeeCCCceeeeEEe-CCeEEEEecC--C-cEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeee-eeCCEEEEEE--C
Q psy2153 8 PYPLNKILDTALPPVHV-QGRVVCALAD--G-SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLA-AVYNKVWCGY--K 80 (325)
Q Consensus 8 ~L~~IkL~dsVl~I~~~-~~~VfVgLAN--G-tLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml-~v~~~LW~g~--g 80 (325)
....+.++..+..|... ++++||+-.. + .|..|.. .+|.. .....+.....| ..+. ..++.+|++. .
T Consensus 64 ~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~-~~g~~----~~~~~~~~~~~~-~g~~~~~~~~~~v~d~~~ 137 (306)
T 2p4o_A 64 QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK-SDGTV----ETLLTLPDAIFL-NGITPLSDTQYLTADSYR 137 (306)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC-TTSCE----EEEEECTTCSCE-EEEEESSSSEEEEEETTT
T ss_pred eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcC-CCCeE----EEEEeCCCcccc-CcccccCCCcEEEEECCC
Confidence 33445566677777764 6789988743 2 4666653 23321 112222211111 1221 2245678776 4
Q ss_pred CeEEEEcCCCC--ceeEec--------CCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCc
Q psy2153 81 NKIHVVDPKSL--KSFDAH--------PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 131 (325)
Q Consensus 81 nkI~VIn~~Tl--ksf~~~--------~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T 131 (325)
++|+++++.+. +.+... .......+.|...|..+|++-.....|+.|+...
T Consensus 138 g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 138 GAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp TEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred CeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 78999998764 222111 1112334556666778999999999999999764
No 274
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=33.05 E-value=2.3e+02 Score=24.24 Aligned_cols=122 Identities=12% Similarity=0.124 Sum_probs=63.5
Q ss_pred CCccceeeCCCceeeeEEeCCeEEEEec------CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEE
Q psy2153 6 PTPYPLNKILDTALPPVHVQGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY 79 (325)
Q Consensus 6 ~~~L~~IkL~dsVl~I~~~~~~VfVgLA------NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~ 79 (325)
|+.+..+..+-.=.+.+..++++|+.=. ..++.+|+-.. +.|..- -.+-.+. --.++..++++||+--
T Consensus 93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~----~~~p~~r-~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNI-DQWSML----GDMQTAR-EGAGLVVASGVIYCLG 166 (301)
T ss_dssp CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT-TEEEEE----EECSSCC-BSCEEEEETTEEEEEC
T ss_pred eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCC-CeEEEC----CCCCCCc-ccceEEEECCEEEEEC
Confidence 4445444333333445556777777532 22577777433 356421 1111111 1234566789999864
Q ss_pred C-------CeEEEEcCCCCceeEecCCC-CCceeEEEEeCCeEEEEEeC-----CCeEEEEecCccc
Q psy2153 80 K-------NKIHVVDPKSLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTYQ 133 (325)
Q Consensus 80 g-------nkI~VIn~~Tlksf~~~~~~-~~~V~~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~e 133 (325)
| +.++++|+++.+.-.+.+-+ ...-..++..+..+++.--. ...+..||.++.+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 3 67999999988433332211 12222455556667765432 2346666666543
No 275
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=32.94 E-value=2.6e+02 Score=24.76 Aligned_cols=71 Identities=18% Similarity=0.015 Sum_probs=43.9
Q ss_pred ceeeeEEe-CCeEEEEec------CCcEEEEEcCCCCCCCCCCCeEEEcCC----CCCceeeeeee--CCEEEEEE----
Q psy2153 17 TALPPVHV-QGRVVCALA------DGSVAIFRRGPDGQWDLSKYHTVTLGL----PHHSVRSLAAV--YNKVWCGY---- 79 (325)
Q Consensus 17 sVl~I~~~-~~~VfVgLA------NGtLaVF~R~~~g~WD~~~~~~I~LG~----~~~PV~cml~v--~~~LW~g~---- 79 (325)
.+..|... ++++||.=. .++|.+|+...+. ..+.+.++. +...+..+.+- ++.+|++.
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~-----~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ-----LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE-----EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe-----EEEEEECChhhcccccccceEEEecCCCEEEEEcCccC
Confidence 67777775 578998643 3689999854321 113344432 11234555555 46899984
Q ss_pred -CCeEEEEcCCCCc
Q psy2153 80 -KNKIHVVDPKSLK 92 (325)
Q Consensus 80 -gnkI~VIn~~Tlk 92 (325)
.+.|++++.++.+
T Consensus 143 ~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 143 DKAALIRVDLQTGL 156 (343)
T ss_dssp GGCEEEEEETTTCC
T ss_pred CCCeEEEEECCCCC
Confidence 3679999988763
No 276
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=32.73 E-value=59 Score=30.78 Aligned_cols=54 Identities=20% Similarity=0.398 Sum_probs=33.7
Q ss_pred CEEEEEE--CCeEEEEcCC---CC---ceeEecCCCCCceeEEEEeC--CeEEEEEe-CCCeEEEEecC
Q psy2153 73 NKVWCGY--KNKIHVVDPK---SL---KSFDAHPRRESQVRQMTWAG--DGVWVSIR-LDSTLRMYNAH 130 (325)
Q Consensus 73 ~~LW~g~--gnkI~VIn~~---Tl---ksf~~~~~~~~~V~~Ma~~G--~GVWiS~~-~ss~IrL~ha~ 130 (325)
+.||++. .++|++++-+ ++ +.|.. ......|+.+. ..+|++.. ....|..|+.+
T Consensus 233 ~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~----~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKHANWTLTPLRVLSF----DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC----SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CEEEEEeCCCCeEEEEEECCCCcEecCEEEeC----CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 4788766 4678887643 23 23421 35567788886 45999775 55566666665
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=32.29 E-value=2.8e+02 Score=24.94 Aligned_cols=66 Identities=14% Similarity=0.072 Sum_probs=49.0
Q ss_pred CCEEEEEEC--CeEEEEcCCCC--ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 72 YNKVWCGYK--NKIHVVDPKSL--KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 72 ~~~LW~g~g--nkI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+++||.+-. ++|..++.... +.|. ........-|+..++++|++-.....|..+|..+.+.++.|.
T Consensus 177 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 177 EQKLYWADAKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEECCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 578877654 66999987644 3332 223455677888999999998889999999999888777664
No 278
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=31.81 E-value=2.6e+02 Score=24.34 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=38.1
Q ss_pred eeeeeCCEEEEEEC--------CeEEEEcCCCCceeEecCCC-CCceeEEEEeCCeEEEEEeCC-----CeEEEEecCcc
Q psy2153 67 SLAAVYNKVWCGYK--------NKIHVVDPKSLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTY 132 (325)
Q Consensus 67 cml~v~~~LW~g~g--------nkI~VIn~~Tlksf~~~~~~-~~~V~~Ma~~G~GVWiS~~~s-----s~IrL~ha~T~ 132 (325)
++..++++||+--| +.++++|+++.+.-.+.+-+ ...-..++..+..+++.--.+ ..+..||.++.
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 45678899987554 46999999988433332211 122224555566777664322 23566666554
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=30.98 E-value=92 Score=31.82 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=46.7
Q ss_pred CCEEEEEEC--CeEEEEcCCCC--ceeEecCCCCCceeEEEEeCCeEEEEEeCCCeEEEEecCccceeeeee
Q psy2153 72 YNKVWCGYK--NKIHVVDPKSL--KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 72 ~~~LW~g~g--nkI~VIn~~Tl--ksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss~IrL~ha~T~e~LqdId 139 (325)
+++||.+-. ++|.+++.... +.+............|+..+.++|++-.....|+.+|..+.+.++.|.
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 367776654 46888887654 222221122234455777888998888889999999999998887774
No 280
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=30.58 E-value=2.6e+02 Score=24.01 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=56.8
Q ss_pred eeeEEeCCeEEEEe--------cCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCc--eeeeeeeCCEEEEEEC-------C
Q psy2153 19 LPPVHVQGRVVCAL--------ADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHS--VRSLAAVYNKVWCGYK-------N 81 (325)
Q Consensus 19 l~I~~~~~~VfVgL--------ANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~P--V~cml~v~~~LW~g~g-------n 81 (325)
.+....++++|+-= ...++.+|+-.. +.|.. +.....| -.++..++++||+--| +
T Consensus 149 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~-------~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 220 (302)
T 2xn4_A 149 VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT-NEWTY-------IAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRK 220 (302)
T ss_dssp CEEEEETTEEEEECCEETTTTEECCCEEEEETTT-TEEEE-------ECCCSSCCBSCEEEEETTEEEEECCBSSSSBCC
T ss_pred ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC-CcEEE-------CCCCccccccccEEEECCEEEEECCCCCCcccc
Confidence 34455677777741 123577777433 35642 1221112 2356777899988643 5
Q ss_pred eEEEEcCCCCceeEecCCCC-CceeEEEEeCCeEEEEEeCC-----CeEEEEecCccc
Q psy2153 82 KIHVVDPKSLKSFDAHPRRE-SQVRQMTWAGDGVWVSIRLD-----STLRMYNAHTYQ 133 (325)
Q Consensus 82 kI~VIn~~Tlksf~~~~~~~-~~V~~Ma~~G~GVWiS~~~s-----s~IrL~ha~T~e 133 (325)
.++++|+++.+..++.+-+. ..-..++..+..+++.--.+ ..+.+||.++.+
T Consensus 221 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 221 SVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 69999999884333322111 11123555566676553322 346667666543
No 281
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=29.94 E-value=1.4e+02 Score=29.52 Aligned_cols=61 Identities=10% Similarity=0.078 Sum_probs=39.8
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceee-eeeeCCEEEEEECCeEEEEcCC
Q psy2153 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRS-LAAVYNKVWCGYKNKIHVVDPK 89 (325)
Q Consensus 28 VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~c-ml~v~~~LW~g~gnkI~VIn~~ 89 (325)
+|+|..+|+|.=..-...+... .....+.+.....||.. |..-.+.|+++++++|.-+-.+
T Consensus 421 ~FlGT~~G~l~Kv~~~~~~~~~-~~~~~~~~~~~~~pi~~~l~~~~~~Lyv~s~~~V~~vpv~ 482 (527)
T 4fww_A 421 AHMGTMDGRILQVELVRSLNYL-LYVSNFSLGDSGQPVQRDVSRLGDHLLFASGDQVFQVPIQ 482 (527)
T ss_dssp EEEEETTSEEEEEECSCCSSCC-CEEEEEEETTSCCCBCSCCEEETTEEEEEETTEEEEEETT
T ss_pred EEEECCCCeEEEEEEcCCCCcc-eEEEEEEecCCCceeehhcccCCCEEEEEECCEEEEEecc
Confidence 8999999987655433333221 11134566555678865 4445689999999998877544
No 282
>3nvx_A Protein A39; beta-propeller, viral protein; HET: NAG; 2.00A {Vaccinia virus} PDB: 3nvn_A*
Probab=29.23 E-value=2.2e+02 Score=27.64 Aligned_cols=65 Identities=9% Similarity=0.079 Sum_probs=43.8
Q ss_pred CCceeeeeeeCCEEEEEECCeEEEEcCCCC-ceeEecCCCCCceeEEEE---eCCeEEEEEeCCCeEEEEec
Q psy2153 62 HHSVRSLAAVYNKVWCGYKNKIHVVDPKSL-KSFDAHPRRESQVRQMTW---AGDGVWVSIRLDSTLRMYNA 129 (325)
Q Consensus 62 ~~PV~cml~v~~~LW~g~gnkI~VIn~~Tl-ksf~~~~~~~~~V~~Ma~---~G~GVWiS~~~ss~IrL~ha 129 (325)
..++..|..-.+.||+|-+|.||-++.+.+ |+-+.. ..-|+-+.. .+..+++.-.+.=.-.+|+-
T Consensus 10 ~e~~~~~~~~~~~l~vG~r~~ly~ls~~~~ck~~~eC---~NyIrVL~~~~~~~~~L~vCGTNAf~P~C~~~ 78 (383)
T 3nvx_A 10 SEEIISTYLLDDVLYTGVNGAVYTFSNNKLNKTGLTN---NNYITTSIKVEDADKDTLVCGTNNGNPKCWKI 78 (383)
T ss_dssp CCCCCEEEEETTEEEEECBSEEEEEETTEEEEEECCS---SCBEEEEEEC----CCEEEEECGGGSCEEEET
T ss_pred CcceeEEEeCCCeEEEcccceEEEEeccccccChhHh---cceEEEEEEccCCCCeEEEecCCCCCCceEee
Confidence 378888997789999999999999988777 322222 255666655 34567766666555555654
No 283
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=28.90 E-value=1.5e+02 Score=25.98 Aligned_cols=67 Identities=10% Similarity=-0.046 Sum_probs=39.5
Q ss_pred CEEEEEEC-C---eEEEEcCCCCceeEecCCCCCceeEEEEeCCeEEEEEe-CCCeEEEEecCccceeeeee
Q psy2153 73 NKVWCGYK-N---KIHVVDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 73 ~~LW~g~g-n---kI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~-~ss~IrL~ha~T~e~LqdId 139 (325)
..|..++. + +|++++.++.+...........+...+++.+|=++++. .+..|++||..+.+..+...
T Consensus 48 ~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 48 SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 34554443 2 49999998874333322222333345566666444443 45689999999988655443
No 284
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=28.42 E-value=58 Score=33.84 Aligned_cols=65 Identities=9% Similarity=0.113 Sum_probs=38.9
Q ss_pred eEEEEecCCcEEEEEcCCCCCCCCCCC---eEEEcCCCCCceeeeeeeC--CEEEEEECCeEEEEcCCCC
Q psy2153 27 RVVCALADGSVAIFRRGPDGQWDLSKY---HTVTLGLPHHSVRSLAAVY--NKVWCGYKNKIHVVDPKSL 91 (325)
Q Consensus 27 ~VfVgLANGtLaVF~R~~~g~WD~~~~---~~I~LG~~~~PV~cml~v~--~~LW~g~gnkI~VIn~~Tl 91 (325)
=+|+|..+|+|.=.--...+.|..... ..+.+.....||+.|.... +.|++++.++|.=+....-
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kVPl~~C 500 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQLPLHRC 500 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEEESCCG
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEEEhhhc
Confidence 389999999874211111222321111 2234555568999988764 7899999999887766544
No 285
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=26.76 E-value=3.2e+02 Score=26.91 Aligned_cols=115 Identities=11% Similarity=0.007 Sum_probs=0.0
Q ss_pred CCceeeeEEeCCeEEEEecC-----CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEE----CCeEEE
Q psy2153 15 LDTALPPVHVQGRVVCALAD-----GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGY----KNKIHV 85 (325)
Q Consensus 15 ~dsVl~I~~~~~~VfVgLAN-----GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~----gnkI~V 85 (325)
.+.+......+++ ++-++| ++|.+++-+..+ ..+.+.+.-+.+...|..+...++++.+.. ..+|++
T Consensus 271 ~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~---~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 271 VGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPA---RASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp SSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCS---GGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCC---ccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEE
Q ss_pred EcCCCCceeEecCCCCCceeEEEEeCCeEEEEEeCCC-----eEEEEecCccc
Q psy2153 86 VDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDS-----TLRMYNAHTYQ 133 (325)
Q Consensus 86 In~~Tlksf~~~~~~~~~V~~Ma~~G~GVWiS~~~ss-----~IrL~ha~T~e 133 (325)
++......-+..-.....|..+..+.+|=.+.+..++ +|++||..|.+
T Consensus 347 ~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 347 ATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
No 286
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=26.05 E-value=4.8e+02 Score=25.66 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=43.0
Q ss_pred Cceeeeeee-CCEEEEEEC-C---eEEEEcCCCCc---eeEecCCCCCceeEEEEe--CCeEEEEEeC---CCeEEEEec
Q psy2153 63 HSVRSLAAV-YNKVWCGYK-N---KIHVVDPKSLK---SFDAHPRRESQVRQMTWA--GDGVWVSIRL---DSTLRMYNA 129 (325)
Q Consensus 63 ~PV~cml~v-~~~LW~g~g-n---kI~VIn~~Tlk---sf~~~~~~~~~V~~Ma~~--G~GVWiS~~~---ss~IrL~ha 129 (325)
..|..+... ++++.+... + +|++++..+.+ .+..+ ...|..+..+ +.-++++.+. -++|++||.
T Consensus 336 ~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~---~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE---VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC---SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC---CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 357777667 677765543 2 58999975543 33332 4556666654 3447766654 467999998
Q ss_pred Cccc
Q psy2153 130 HTYQ 133 (325)
Q Consensus 130 ~T~e 133 (325)
.|.+
T Consensus 413 ~tg~ 416 (710)
T 2xdw_A 413 TKEE 416 (710)
T ss_dssp TSSS
T ss_pred CCCc
Confidence 8755
No 287
>2bw2_A Bypass of forespore C; sporulation, signaling protein, BOFC, sigmak checkpoint; NMR {Bacillus subtilis}
Probab=25.32 E-value=8.3 Score=32.67 Aligned_cols=40 Identities=10% Similarity=-0.019 Sum_probs=27.5
Q ss_pred CCCCCCccc----eeeCCCceeeeE-EeCCeEEEEe-cCCcEEEEE
Q psy2153 2 EYPHPTPYP----LNKILDTALPPV-HVQGRVVCAL-ADGSVAIFR 41 (325)
Q Consensus 2 ~~~~~~~L~----~IkL~dsVl~I~-~~~~~VfVgL-ANGtLaVF~ 41 (325)
+||.|+..- .|-++-.|..|. .+++.-|.|+ .||.|++|+
T Consensus 42 ~y~~W~l~~~~~~~vi~~k~VdDisP~~K~ngY~Gi~~dG~LslF~ 87 (140)
T 2bw2_A 42 AYAGWTLVEQKKGYVLFRKQMDDISPLSKVNGYIGVSDNGVISTFH 87 (140)
T ss_dssp HSTTSEEEEEETTEEEEEEECSSCCTGGGTCCCEEEETTTEEEEBS
T ss_pred hCCCcEEEECCCCeEEEEEEccccChHHhcCceEEEecCCeEEEEe
Confidence 477777654 333444555554 3577789999 599999998
No 288
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=24.95 E-value=4.6e+02 Score=25.08 Aligned_cols=109 Identities=13% Similarity=0.043 Sum_probs=59.8
Q ss_pred CceeeeEEeCCeEEEEec----CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCcee---------eeeee----CCE-EEE
Q psy2153 16 DTALPPVHVQGRVVCALA----DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVR---------SLAAV----YNK-VWC 77 (325)
Q Consensus 16 dsVl~I~~~~~~VfVgLA----NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~---------cml~v----~~~-LW~ 77 (325)
..|.++....++++..-. +|+..+|.+..+|. .+.+.-+. ..++ ..... ++. |..
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~l~~~~--~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA-----EESALPAP--WNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC-----EEESSCTT--CCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC-----cceeCCCC--ccccccccccCCccceeeeecCCCeEEEE
Confidence 466677777776655554 66777887644332 12222221 3333 22222 455 544
Q ss_pred EEC--CeEEEEcCC--C-C--ceeEecCC--CCCceeEEEEeCCeEEEEEeC-C----------CeEEEEecCc
Q psy2153 78 GYK--NKIHVVDPK--S-L--KSFDAHPR--RESQVRQMTWAGDGVWVSIRL-D----------STLRMYNAHT 131 (325)
Q Consensus 78 g~g--nkI~VIn~~--T-l--ksf~~~~~--~~~~V~~Ma~~G~GVWiS~~~-s----------s~IrL~ha~T 131 (325)
+.. .+|++++.. + . +.+...+. ....+..++++.+|=++++.. + ..|++||..+
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 443 469999976 3 3 34433211 235677888886663333222 2 5899999988
No 289
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=24.67 E-value=4.4e+02 Score=24.71 Aligned_cols=96 Identities=6% Similarity=0.103 Sum_probs=57.4
Q ss_pred eEEEEecCC-----cEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeee--CCEEEEEE--CCeEEEEcCCCCce--eE
Q psy2153 27 RVVCALADG-----SVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAV--YNKVWCGY--KNKIHVVDPKSLKS--FD 95 (325)
Q Consensus 27 ~VfVgLANG-----tLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v--~~~LW~g~--gnkI~VIn~~Tlks--f~ 95 (325)
+|||+-.++ .+.+|.+ +|.|. ....+.-.. .| ..+.+- ++.||++. .++|+.+++++.+. +.
T Consensus 192 ~lyvad~~~~~~~~~v~~~~~--~g~~~--~~~~l~~~~--~p-~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~ 264 (430)
T 3tc9_A 192 SMIITNDQNNNDRPNNYILTR--ESGFK--VITELTKGQ--NC-NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF 264 (430)
T ss_dssp EEEEEECCSCTTSEEEEEEEG--GGTSC--SEEEEEECS--SC-CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCcccceEEEEeC--CCcee--eeeeeccCC--Cc-eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 488887632 3555554 34442 112332222 33 233332 57899886 46799999987632 22
Q ss_pred ecCCCCCceeEEEEeCCe--EEEEEeCCCeEEEEecC
Q psy2153 96 AHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH 130 (325)
Q Consensus 96 ~~~~~~~~V~~Ma~~G~G--VWiS~~~ss~IrL~ha~ 130 (325)
.......-+.|+.+.+| +|++-.....|+.|+..
T Consensus 265 -~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 265 -TIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp -ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred -EcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 11122456788987555 89999999999997754
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=24.33 E-value=4.6e+02 Score=24.89 Aligned_cols=91 Identities=14% Similarity=0.100 Sum_probs=62.5
Q ss_pred CCCccceeeCCCceeeeEEe--CCeEEEEecCCcEEEEEcCCCCCCCCCCCeEE-EcCC--CCCceeeeeee-C----CE
Q psy2153 5 HPTPYPLNKILDTALPPVHV--QGRVVCALADGSVAIFRRGPDGQWDLSKYHTV-TLGL--PHHSVRSLAAV-Y----NK 74 (325)
Q Consensus 5 ~~~~L~~IkL~dsVl~I~~~--~~~VfVgLANGtLaVF~R~~~g~WD~~~~~~I-~LG~--~~~PV~cml~v-~----~~ 74 (325)
..|++++++|+..+--+++. .++||++--+--|..|+-.+++. ...+.+ .++. -..-+..|... . +.
T Consensus 169 ~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~---~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gy 245 (355)
T 3amr_A 169 SGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG---SNGTVIDRADGRHLTRDIEGLTIYYAADGKGY 245 (355)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSC---SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEE
T ss_pred cceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCC---CCceEEEEecCCccccCcceEEEEecCCCCEE
Confidence 35778999999999988886 48999999998899998554431 222333 3332 22346777765 2 35
Q ss_pred EEEEEC--CeEEEEcCC-CC---ceeEecC
Q psy2153 75 VWCGYK--NKIHVVDPK-SL---KSFDAHP 98 (325)
Q Consensus 75 LW~g~g--nkI~VIn~~-Tl---ksf~~~~ 98 (325)
|.++|+ |+..|++.+ +. .+|.+..
T Consensus 246 LivSsQG~~s~~Vydr~~~~~~vg~f~Ig~ 275 (355)
T 3amr_A 246 LMASSQGNSSYAIYDRQGKNKYVADFRITD 275 (355)
T ss_dssp EEEEEGGGTEEEEEESSTTCCEEEEEEECC
T ss_pred EEEEcCCCCEEEEEECCCCCcEEEEEEecC
Confidence 899995 569999986 55 5676544
No 291
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=24.07 E-value=3.5e+02 Score=23.40 Aligned_cols=109 Identities=7% Similarity=-0.018 Sum_probs=57.8
Q ss_pred eeeEEeCCeEEEEecC-------CcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-------CeEE
Q psy2153 19 LPPVHVQGRVVCALAD-------GSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NKIH 84 (325)
Q Consensus 19 l~I~~~~~~VfVgLAN-------GtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g-------nkI~ 84 (325)
.+.+..++++||-=.. .++.+|+-.. ..|..-++ +-.+ .--.++..++++||+--| +.++
T Consensus 142 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~----~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 215 (315)
T 4asc_A 142 HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK-FEWKELAP----MQTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAE 215 (315)
T ss_dssp CEEEEETTEEEEECCBCTTSCBCCCEEEEETTT-TEEEECCC----CSSC-CBSCEEEEETTEEEEEEEECSSSEEEEEE
T ss_pred eeEEEECCEEEEEeCCCCCCcccceEEEEeCCC-CeEEECCC----CCCc-hhceEEEEECCEEEEEeccCCCCccceEE
Confidence 3445567777664322 2577776443 35642211 1111 112356677999987533 3699
Q ss_pred EEcCCCCceeEecCCC-CCceeEEEEeCCeEEEEEeC--------------CCeEEEEecCccc
Q psy2153 85 VVDPKSLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRL--------------DSTLRMYNAHTYQ 133 (325)
Q Consensus 85 VIn~~Tlksf~~~~~~-~~~V~~Ma~~G~GVWiS~~~--------------ss~IrL~ha~T~e 133 (325)
++|+++.+.-++.+-+ ...-..++..+.-+++.--. ...+..||.++.+
T Consensus 216 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 216 VYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 9999998433333211 12222455556667765332 2346777776654
No 292
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.62 E-value=5.1e+02 Score=24.71 Aligned_cols=126 Identities=9% Similarity=0.053 Sum_probs=73.8
Q ss_pred CCccceeeCCCce-------eeeEEe---------CCeEEEEec-CCcEEEEEcCCCCCCCCCC-------CeEEEcCC-
Q psy2153 6 PTPYPLNKILDTA-------LPPVHV---------QGRVVCALA-DGSVAIFRRGPDGQWDLSK-------YHTVTLGL- 60 (325)
Q Consensus 6 ~~~L~~IkL~dsV-------l~I~~~---------~~~VfVgLA-NGtLaVF~R~~~g~WD~~~-------~~~I~LG~- 60 (325)
+|.++++.||+.+ ..|... ++.+|++=+ .+-|+||+...+..|-... .....++.
T Consensus 135 ~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~ 214 (381)
T 3q6k_A 135 YPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGK 214 (381)
T ss_dssp CCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTE
T ss_pred ceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCE
Confidence 4788999998643 334433 456777764 4579999988777785432 12223322
Q ss_pred C---CCceeeeeee------CCEEEEE--ECCeEEEEcCCCC------ceeEecCCC--CCceeEEEEe-CCe-EEEEEe
Q psy2153 61 P---HHSVRSLAAV------YNKVWCG--YKNKIHVVDPKSL------KSFDAHPRR--ESQVRQMTWA-GDG-VWVSIR 119 (325)
Q Consensus 61 ~---~~PV~cml~v------~~~LW~g--~gnkI~VIn~~Tl------ksf~~~~~~--~~~V~~Ma~~-G~G-VWiS~~ 119 (325)
+ ..-|-.|..- +..|+-. ++.+.|-|.++-| +.|+.--++ .++-..|+.+ ..| ++++.-
T Consensus 215 ~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~ 294 (381)
T 3q6k_A 215 EYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEA 294 (381)
T ss_dssp EEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEES
T ss_pred EeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEec
Confidence 0 0112233332 2467543 3456999987665 233322222 2444456664 455 689999
Q ss_pred CCCeEEEEecCc
Q psy2153 120 LDSTLRMYNAHT 131 (325)
Q Consensus 120 ~ss~IrL~ha~T 131 (325)
+...|..|++.+
T Consensus 295 ~~~aI~~w~~~~ 306 (381)
T 3q6k_A 295 NTKQVSCWNTQK 306 (381)
T ss_dssp SSSEEEEEETTS
T ss_pred cCCeEEEEeCCC
Confidence 999999999985
No 293
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.48 E-value=2.6e+02 Score=24.23 Aligned_cols=58 Identities=5% Similarity=-0.039 Sum_probs=33.0
Q ss_pred eEEEEcCCCCceeEecCCCCCceeEEEEeCCeEEE-EEeCCCeEEEEecCccceeeeee
Q psy2153 82 KIHVVDPKSLKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVD 139 (325)
Q Consensus 82 kI~VIn~~Tlksf~~~~~~~~~V~~Ma~~G~GVWi-S~~~ss~IrL~ha~T~e~LqdId 139 (325)
+|++++.++.+................++.+|=++ ..+....|++||..+.+..+-..
T Consensus 61 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~ 119 (396)
T 3c5m_A 61 NYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYT 119 (396)
T ss_dssp EEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEe
Confidence 69999988874322222112222225566555444 33445589999998877544333
No 294
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=22.27 E-value=84 Score=27.50 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=48.0
Q ss_pred EEEECCeEEEEcCCCCceeEecC------CCCCceeEEEEe--CCeEEEEE-------------eCCCeEEEEecCccce
Q psy2153 76 WCGYKNKIHVVDPKSLKSFDAHP------RRESQVRQMTWA--GDGVWVSI-------------RLDSTLRMYNAHTYQH 134 (325)
Q Consensus 76 W~g~gnkI~VIn~~Tlksf~~~~------~~~~~V~~Ma~~--G~GVWiS~-------------~~ss~IrL~ha~T~e~ 134 (325)
-++||..|.+-+..|..-+-.|. ....+|++--.. ....|+-. +.+..|||.|..|..-
T Consensus 17 ~V~~Gs~VtL~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H~~T~~~ 96 (199)
T 3mal_A 17 EITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKW 96 (199)
T ss_dssp BCBTTCEEEEEETTTCCEEEEEEEECSSTTCCEEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEETTTCCE
T ss_pred EEeeCCEEEEEECCCCCcceeCCccCCCCCCCEEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEECCCCCC
Confidence 35778888888877762221111 123667775432 23578753 4588899999999999
Q ss_pred eeeeecchhhhhh
Q psy2153 135 LQDVDIEPYVSKM 147 (325)
Q Consensus 135 LqdIdIa~~v~~~ 147 (325)
|..=|++.+++..
T Consensus 97 LhSH~~~~P~s~~ 109 (199)
T 3mal_A 97 LHSHLHASPISGN 109 (199)
T ss_dssp EEEEEEECTTTCS
T ss_pred EeECCcCCCCCCC
Confidence 9988887776543
No 295
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=22.16 E-value=3.8e+02 Score=23.13 Aligned_cols=107 Identities=8% Similarity=0.089 Sum_probs=54.0
Q ss_pred eeEEeCCeEEEEec----------CCcEEEEEcCCCCCCCCCCCeEEEcCCCCCceeeeeeeCCEEEEEEC-------Ce
Q psy2153 20 PPVHVQGRVVCALA----------DGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYK-------NK 82 (325)
Q Consensus 20 ~I~~~~~~VfVgLA----------NGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV~cml~v~~~LW~g~g-------nk 82 (325)
+++..++++|+-=. ..++.+|+-.. ..|..-++ +..+. .-.++..++++||+--| +.
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~-~~W~~~~~----~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~ 138 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMT-NQWSPCAP----MSVPR-NRIGVGVIDGHIYAVGGSHGCIHHNS 138 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCEEEEETTT-TEEEECCC----CSSCC-BTCEEEEETTEEEEECCEETTEECCC
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceEEEECCCC-CeEeECCC----CCcCc-cccEEEEECCEEEEEcCCCCCccccc
Confidence 34455777776422 13577776433 35642211 11111 11345667899998644 67
Q ss_pred EEEEcCCCCceeEecCCC-CCceeEEEEeCCeEEEEEeC-----CCeEEEEecCcc
Q psy2153 83 IHVVDPKSLKSFDAHPRR-ESQVRQMTWAGDGVWVSIRL-----DSTLRMYNAHTY 132 (325)
Q Consensus 83 I~VIn~~Tlksf~~~~~~-~~~V~~Ma~~G~GVWiS~~~-----ss~IrL~ha~T~ 132 (325)
++++|+++.+.-...+-+ ...-..++..+..+|+.--. ...+..||.++.
T Consensus 139 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 139 VERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 999999888433322211 11112344455666655322 234566665544
No 296
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=21.36 E-value=67 Score=31.58 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=39.1
Q ss_pred EEEEEE-CCeEEEEcCCCCce--eEe-cCCCCCceeEEEEeCCeEEEEEeC----------CCeEEEEecCccce
Q psy2153 74 KVWCGY-KNKIHVVDPKSLKS--FDA-HPRRESQVRQMTWAGDGVWVSIRL----------DSTLRMYNAHTYQH 134 (325)
Q Consensus 74 ~LW~g~-gnkI~VIn~~Tlks--f~~-~~~~~~~V~~Ma~~G~GVWiS~~~----------ss~IrL~ha~T~e~ 134 (325)
+++.+. .+.|+++|..+.+. +.. +......|..++++.+|=++++.. +..|++||..+.+.
T Consensus 28 ~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 28 EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 444333 34588999888732 222 211112488889987776666554 48999999998877
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=21.29 E-value=3.2e+02 Score=27.12 Aligned_cols=59 Identities=25% Similarity=0.416 Sum_probs=34.2
Q ss_pred eEEEEecCCcEEEEEcCC--CCCCCCCCC---------eEEEcCCCCCceeeeeeeC---CEEEEEECCeEEEEcC
Q psy2153 27 RVVCALADGSVAIFRRGP--DGQWDLSKY---------HTVTLGLPHHSVRSLAAVY---NKVWCGYKNKIHVVDP 88 (325)
Q Consensus 27 ~VfVgLANGtLaVF~R~~--~g~WD~~~~---------~~I~LG~~~~PV~cml~v~---~~LW~g~gnkI~VIn~ 88 (325)
-+.++..||+|.+.-.+. ...||.+++ ..|.++. -+..++... +++.|...+.++.+|+
T Consensus 314 ll~i~f~dG~v~~l~~d~e~~msW~~~~~~~~nSl~lvE~i~l~~---~~~~~~~~~~~~g~~~v~~~~~v~~vd~ 386 (452)
T 3pbp_A 314 IVCVSFDDGSLILLFKDLEMSMSWDVDNYVYNNSLVLIERVKLQR---EIKSLITLPEQLGKLYVISDNIIQQVNF 386 (452)
T ss_dssp EEEEEETTTEEEEEEECSCCCCCSSCTTBCSSCEEEEEEEEECCS---CCCEEECCTTSTTEEEEECSSEEEEEEC
T ss_pred EEEEEecCCEEEEEecCCcccceeeccCCCCCCeEEEEEEEEccc---chhheeecCCCCceEEEeecCceEEEec
Confidence 345566789888776543 357998776 4556643 233444433 3566655555666543
No 298
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=21.20 E-value=1.5e+02 Score=30.76 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=42.1
Q ss_pred EEEEecCCcEEEEEcCCCCCCCCCCCeEEEcCCCCCce-eeeeeeC--CEEEEEECCeEEEEcCCCC
Q psy2153 28 VVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSV-RSLAAVY--NKVWCGYKNKIHVVDPKSL 91 (325)
Q Consensus 28 VfVgLANGtLaVF~R~~~g~WD~~~~~~I~LG~~~~PV-~cml~v~--~~LW~g~gnkI~VIn~~Tl 91 (325)
+|+|..+|+|.=..-... .+.......+.+..+..|| +.|.... ..|+++++.+|.=+....-
T Consensus 415 lFLGT~~G~l~Kv~~~~~-~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvPl~~C 480 (681)
T 3oky_A 415 VFVGTKSGKLKKIRADGP-PHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPVESC 480 (681)
T ss_dssp EEEEBTTSEEEEEECCCT-TTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEESCCG
T ss_pred EEEECCCceEEEEEECCC-CCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEEhhhC
Confidence 899999998875443221 1111122345676556898 7887765 5899999999988876544
No 299
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=20.71 E-value=4.1e+02 Score=22.97 Aligned_cols=52 Identities=12% Similarity=0.180 Sum_probs=30.6
Q ss_pred eeeeeCCEEEEEEC--------CeEEEEcCCCCceeEecCCC-CCceeEEEEeCCeEEEEE
Q psy2153 67 SLAAVYNKVWCGYK--------NKIHVVDPKSLKSFDAHPRR-ESQVRQMTWAGDGVWVSI 118 (325)
Q Consensus 67 cml~v~~~LW~g~g--------nkI~VIn~~Tlksf~~~~~~-~~~V~~Ma~~G~GVWiS~ 118 (325)
++..++++||+--| +.++++|+++.+.-++.+-+ ...-..++..+..+++.-
T Consensus 153 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 213 (318)
T 2woz_A 153 NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAG 213 (318)
T ss_dssp EEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEE
T ss_pred EEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEc
Confidence 45667899987443 45999999988433332211 122224555666677654
Done!