Query psy2154
Match_columns 128
No_of_seqs 50 out of 52
Neff 2.8
Searched_HMMs 13730
Date Fri Aug 16 17:40:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2154.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2154hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i6pa_ c.53.2.1 (A:) beta-car 24.2 40 0.0029 23.6 4.1 29 46-74 147-180 (214)
2 d1ddza1 c.53.2.1 (A:84-325) be 14.9 76 0.0055 22.5 3.8 30 45-74 172-206 (242)
3 d1eaka4 g.14.1.2 (A:278-335) G 13.3 38 0.0028 20.1 1.5 19 107-125 29-47 (58)
4 d1h8pa2 g.14.1.2 (A:68-109) PD 12.6 31 0.0022 19.3 0.8 10 115-124 24-33 (42)
5 d1l6ja3 g.14.1.2 (A:216-274) G 12.6 38 0.0028 20.2 1.3 16 109-124 32-47 (59)
6 d1l6ja5 g.14.1.2 (A:332-390) G 12.5 31 0.0023 20.7 0.8 16 109-124 33-48 (59)
7 d1eaka5 g.14.1.2 (A:336-393) G 10.8 47 0.0034 19.7 1.2 18 107-124 29-46 (58)
8 d1wepa_ g.50.1.2 (A:) PHD fing 10.2 55 0.004 19.4 1.5 8 97-104 8-15 (79)
9 d1eaka3 g.14.1.2 (A:217-277) G 9.7 44 0.0032 20.0 0.8 15 111-125 36-50 (61)
10 d1e88a2 g.14.1.2 (A:102-160) F 9.4 46 0.0034 19.8 0.8 14 111-124 34-47 (59)
No 1
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]}
Probab=24.24 E-value=40 Score=23.56 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHh--hhc---cCCceeeecccC
Q psy2154 46 ANERREQYRQVRAH--VRK---DDGRLQAYGWSL 74 (128)
Q Consensus 46 r~erREQYRqVRaH--Vrk---edGRlQAyGWSL 74 (128)
+..-++|.+.+++| |++ +.++++.|||--
T Consensus 147 e~NV~~qv~~L~~~p~i~~~~~~g~~l~IhG~~Y 180 (214)
T d1i6pa_ 147 ELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAY 180 (214)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhccChHHHHHHHcCCccEEEEEEE
Confidence 45667888888888 443 345899999974
No 2
>d1ddza1 c.53.2.1 (A:84-325) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]}
Probab=14.91 E-value=76 Score=22.51 Aligned_cols=30 Identities=23% Similarity=0.125 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHh--hhc---cCCceeeecccC
Q psy2154 45 RANERREQYRQVRAH--VRK---DDGRLQAYGWSL 74 (128)
Q Consensus 45 Rr~erREQYRqVRaH--Vrk---edGRlQAyGWSL 74 (128)
-++.-++|.+.+++| |++ .++++..|||=.
T Consensus 172 ~e~NV~~qv~~L~~~p~I~~~~~~~~~l~IhG~vY 206 (242)
T d1ddza1 172 IELNVLEQVHNVCATSIVQDAWDAGQELTVQGVVY 206 (242)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHTTCCCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHcCCccEEEEEEE
Confidence 356778888888887 444 245799999975
No 3
>d1eaka4 g.14.1.2 (A:278-335) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.33 E-value=38 Score=20.07 Aligned_cols=19 Identities=11% Similarity=-0.193 Sum_probs=13.3
Q ss_pred CcCCCCCCeeeeecccccc
Q psy2154 107 LTEKEPGMKVSVPQEMAIG 125 (128)
Q Consensus 107 L~ekdpsMKlWCAagVnl~ 125 (128)
..+-...-++|||+-.|..
T Consensus 29 t~~~~~~~~~WCaTt~nyd 47 (58)
T d1eaka4 29 TTEGRTDGYRWCGTTEDYD 47 (58)
T ss_dssp BCTTCSSCCCEEESSSCTT
T ss_pred ccCCCCCCccCcCCccccC
Confidence 3344556789999987753
No 4
>d1h8pa2 g.14.1.2 (A:68-109) PDC-109, collagen-binding type II domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.60 E-value=31 Score=19.33 Aligned_cols=10 Identities=0% Similarity=-0.333 Sum_probs=8.0
Q ss_pred eeeeeccccc
Q psy2154 115 KVSVPQEMAI 124 (128)
Q Consensus 115 KlWCAagVnl 124 (128)
+.|||+-.|.
T Consensus 24 ~~WCatt~ny 33 (42)
T d1h8pa2 24 MSWCSLSPNY 33 (42)
T ss_dssp SCEEESSSBH
T ss_pred CcCcCccccc
Confidence 6899997764
No 5
>d1l6ja3 g.14.1.2 (A:216-274) Gelatinase B (MMP-9) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.59 E-value=38 Score=20.22 Aligned_cols=16 Identities=0% Similarity=-0.197 Sum_probs=11.7
Q ss_pred CCCCCCeeeeeccccc
Q psy2154 109 EKEPGMKVSVPQEMAI 124 (128)
Q Consensus 109 ekdpsMKlWCAagVnl 124 (128)
+-..+-++|||+-.|.
T Consensus 32 ~~~~~~~~WCaTT~ny 47 (59)
T d1l6ja3 32 DGRSDGLPWCSTTANY 47 (59)
T ss_dssp TTCSSCCCEEESSSBH
T ss_pred CCCCCCcCEeCccccc
Confidence 3345678999998774
No 6
>d1l6ja5 g.14.1.2 (A:332-390) Gelatinase B (MMP-9) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.49 E-value=31 Score=20.65 Aligned_cols=16 Identities=6% Similarity=-0.027 Sum_probs=11.4
Q ss_pred CCCCCCeeeeeccccc
Q psy2154 109 EKEPGMKVSVPQEMAI 124 (128)
Q Consensus 109 ekdpsMKlWCAagVnl 124 (128)
+-..+-++|||+-.|.
T Consensus 33 ~g~~~~~~WCatT~ny 48 (59)
T d1l6ja5 33 EGRGDGRLWCATTSNF 48 (59)
T ss_dssp TTCSSCCCEEESSSBH
T ss_pred CCCCCCccCcCccccc
Confidence 3345568999998774
No 7
>d1eaka5 g.14.1.2 (A:336-393) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.79 E-value=47 Score=19.70 Aligned_cols=18 Identities=6% Similarity=-0.062 Sum_probs=12.5
Q ss_pred CcCCCCCCeeeeeccccc
Q psy2154 107 LTEKEPGMKVSVPQEMAI 124 (128)
Q Consensus 107 L~ekdpsMKlWCAagVnl 124 (128)
..+-..+-+.|||+-.|.
T Consensus 29 t~~~~~~~~~WCatt~ny 46 (58)
T d1eaka5 29 TSAGRSDGKMWCATTANY 46 (58)
T ss_dssp BCTTCSSSCCEEESSSCH
T ss_pred ccCCCCCCccCcCccccc
Confidence 334455678999998774
No 8
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.16 E-value=55 Score=19.35 Aligned_cols=8 Identities=63% Similarity=1.211 Sum_probs=5.8
Q ss_pred CcCceeec
Q psy2154 97 PVPVPVYC 104 (128)
Q Consensus 97 ~VPVPVyC 104 (128)
...|||||
T Consensus 8 ~~~~pv~C 15 (79)
T d1wepa_ 8 MALVPVYC 15 (79)
T ss_dssp CCCCCCCS
T ss_pred CCcCCeEe
Confidence 44678888
No 9
>d1eaka3 g.14.1.2 (A:217-277) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.68 E-value=44 Score=20.04 Aligned_cols=15 Identities=0% Similarity=-0.161 Sum_probs=10.8
Q ss_pred CCCCeeeeecccccc
Q psy2154 111 EPGMKVSVPQEMAIG 125 (128)
Q Consensus 111 dpsMKlWCAagVnl~ 125 (128)
...-++|||+-.|..
T Consensus 36 ~~~~~~WCatt~~yd 50 (61)
T d1eaka3 36 RSDGFLWCSTTYNFE 50 (61)
T ss_dssp CSSCCCEEESSSBTT
T ss_pred CCCCccCcCCccccc
Confidence 345578999987753
No 10
>d1e88a2 g.14.1.2 (A:102-160) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.40 E-value=46 Score=19.84 Aligned_cols=14 Identities=0% Similarity=-0.299 Sum_probs=10.2
Q ss_pred CCCCeeeeeccccc
Q psy2154 111 EPGMKVSVPQEMAI 124 (128)
Q Consensus 111 dpsMKlWCAagVnl 124 (128)
...-+.|||+-.|.
T Consensus 34 ~~~~~~WCaTT~ny 47 (59)
T d1e88a2 34 RRDNMKWCGTTQNY 47 (59)
T ss_dssp CCSSCCEEESSTBH
T ss_pred CCCCcCCcCCcccc
Confidence 34557999998764
Done!