BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2157
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58A65|JIP4_MOUSE C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus
GN=Spag9 PE=1 SV=2
Length = 1321
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM 66
M +KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+AHTYQHLQDVDIEPYVSKM
Sbjct: 1076 MKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHAHTYQHLQDVDIEPYVSKM 1135
Query: 67 L 67
L
Sbjct: 1136 L 1136
>sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens
GN=SPAG9 PE=1 SV=4
Length = 1321
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM 66
M +KSFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+AHTYQHLQDVDIEPYVSKM
Sbjct: 1076 MKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHAHTYQHLQDVDIEPYVSKM 1135
Query: 67 L 67
L
Sbjct: 1136 L 1136
>sp|Q9UPT6|JIP3_HUMAN C-Jun-amino-terminal kinase-interacting protein 3 OS=Homo sapiens
GN=MAPK8IP3 PE=1 SV=3
Length = 1336
Score = 119 bits (299), Expect = 4e-27, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM 66
M +KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+AHT+QHLQDVDIEPYVSKM
Sbjct: 1075 MQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHAHTHQHLQDVDIEPYVSKM 1134
Query: 67 L 67
L
Sbjct: 1135 L 1135
>sp|Q9ESN9|JIP3_MOUSE C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus
GN=Mapk8ip3 PE=1 SV=1
Length = 1337
Score = 119 bits (298), Expect = 5e-27, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 57/61 (93%)
Query: 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKM 66
M +KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+AHT+QHLQDVDIEPYVSKM
Sbjct: 1076 MQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHAHTHQHLQDVDIEPYVSKM 1135
Query: 67 L 67
L
Sbjct: 1136 L 1136
>sp|Q9GQF1|JIP3_DROME JNK-interacting protein 3 OS=Drosophila melanogaster GN=syd PE=1 SV=1
Length = 1227
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 2/66 (3%)
Query: 4 LDP--MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61
+DP +N S DAHPR+ESQVRQM G GVWVSIRLDSTLR+YN HT++H QDVDIEP
Sbjct: 1017 VDPVSLNIVHSLDAHPRKESQVRQMAATGAGVWVSIRLDSTLRLYNTHTFEHKQDVDIEP 1076
Query: 62 YVSKML 67
YVSKML
Sbjct: 1077 YVSKML 1082
>sp|Q29EP6|JIP3_DROPS JNK-interacting protein 3 OS=Drosophila pseudoobscura pseudoobscura
GN=syd PE=3 SV=2
Length = 1235
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/66 (72%), Positives = 54/66 (81%), Gaps = 2/66 (3%)
Query: 4 LDP--MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61
+DP +N S DAHPR+ESQVRQM G GVWVSIRLDSTLR+YN HT++H QDVDIEP
Sbjct: 1025 VDPISLNIVHSLDAHPRKESQVRQMAATGAGVWVSIRLDSTLRLYNTHTFEHKQDVDIEP 1084
Query: 62 YVSKML 67
YVSKML
Sbjct: 1085 YVSKML 1090
>sp|P34609|JIP_CAEEL JNK-interacting protein OS=Caenorhabditis elegans GN=unc-16 PE=1
SV=3
Length = 1157
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 2/66 (3%)
Query: 4 LDPMNFQ--KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61
LD + Q K F AHPR++SQVR M W G GVW+SIRLDSTLR+Y+AHTY+HLQDVDIEP
Sbjct: 919 LDAESLQIVKVFAAHPRKDSQVRNMQWVGAGVWLSIRLDSTLRLYHAHTYEHLQDVDIEP 978
Query: 62 YVSKML 67
YV+KML
Sbjct: 979 YVTKML 984
>sp|A2AWP8|ARGAL_MOUSE Rho guanine nucleotide exchange factor 10-like protein OS=Mus
musculus GN=Arhgef10l PE=1 SV=1
Length = 1280
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 10 QKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 67
Q+SF+AH V M AG GVW++ S++R+++ T +HLQ+++I + +L
Sbjct: 1001 QQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLL 1058
>sp|Q29RM4|ARGAL_BOVIN Rho guanine nucleotide exchange factor 10-like protein OS=Bos taurus
GN=ARHGEF10L PE=2 SV=1
Length = 1237
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 10 QKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 67
Q+SF+AH V M AG GVW++ S++R+++ T +HLQ+++I + +L
Sbjct: 959 QQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLL 1016
>sp|Q8C033|ARHGA_MOUSE Rho guanine nucleotide exchange factor 10 OS=Mus musculus GN=Arhgef10
PE=1 SV=2
Length = 1345
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 1 MDWLDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 60
M ++ + +AH + M AG G+W++ STLR+++ T +HLQDV+I+
Sbjct: 1067 MASVETHTIENQLEAHQDEGMVISHMAVAGVGIWIAFTSGSTLRLFHTETLKHLQDVNID 1126
Query: 61 PYVSKML 67
V ML
Sbjct: 1127 APVHSML 1133
>sp|Q5R5M3|ARGAL_PONAB Rho guanine nucleotide exchange factor 10-like protein OS=Pongo
abelii GN=ARHGEF10L PE=2 SV=1
Length = 1233
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 10 QKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 67
Q+SF+AH V M AG GVW++ +++R+++ T +HLQ+++I + +L
Sbjct: 957 QQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLFHTETLEHLQEINIATRTTFLL 1014
>sp|Q9HCE6|ARGAL_HUMAN Rho guanine nucleotide exchange factor 10-like protein OS=Homo
sapiens GN=ARHGEF10L PE=1 SV=3
Length = 1279
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 10 QKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 67
Q+SF+AH V M AG GVW++ +++R+++ T +HLQ+++I + +L
Sbjct: 1003 QQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLFHTETLEHLQEINIATRTTFLL 1060
>sp|O15013|ARHGA_HUMAN Rho guanine nucleotide exchange factor 10 OS=Homo sapiens GN=ARHGEF10
PE=1 SV=4
Length = 1369
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 10 QKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 67
+ +AH + M +G G+W++ STLR+++ T +HLQD++I V ML
Sbjct: 1099 EGQLEAHQEEGMVISHMAVSGVGIWIAFTSGSTLRLFHTETLKHLQDINIATPVHNML 1156
>sp|Q80U35|ARHGH_MOUSE Rho guanine nucleotide exchange factor 17 OS=Mus musculus GN=Arhgef17
PE=1 SV=2
Length = 2057
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 64
D + + +F V M + GVWV+++ + + +Y+ T++ L +VD+ P V
Sbjct: 1839 DTLQLEHTFYVGQDSSRSVACMVDSSLGVWVTLKGSAHVCLYHPDTFEQLAEVDVTPPVH 1898
Query: 65 KML 67
+ML
Sbjct: 1899 RML 1901
>sp|Q96PE2|ARHGH_HUMAN Rho guanine nucleotide exchange factor 17 OS=Homo sapiens GN=ARHGEF17
PE=1 SV=1
Length = 2063
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 32 GVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKML 67
GVWV+++ + + +Y+ T++ L +VD+ P V +ML
Sbjct: 1872 GVWVTLKGSAHVCLYHPDTFEQLAEVDVTPPVHRML 1907
>sp|P49735|MCM2_DROME DNA replication licensing factor Mcm2 OS=Drosophila melanogaster
GN=Mcm2 PE=1 SV=1
Length = 887
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 21 SQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQ----DVDIEPYVSKMLDCLI 71
+Q+RQ ++A + +++R ++S +RM AH HL+ + D+ + ML+ I
Sbjct: 725 AQLRQESFATGSLPITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLESFI 780
>sp|Q2GSJ9|HIR1_CHAGB Protein HIR1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51
/ DSM 1962 / NBRC 6347 / NRRL 1970) GN=HIR1 PE=3 SV=1
Length = 1080
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 11 KSFDAHPR---RESQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDI 59
+++ H R +S V+ + W+ D + VS+ LDS + +++ HT++ L+ + +
Sbjct: 119 ENWKTHKRLVGHDSDVQDLAWSYDNSILVSVGLDSKVVVWSGHTFEKLKTIAV 171
>sp|O33840|PULA_THEMA Pullulanase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM
3109 / JCM 10099) GN=pulA PE=1 SV=2
Length = 843
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 3 WLDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSI---RLDSTLRMYNAHTYQHLQDVDI 59
W+ + F+ D P QV M + G+GVW ++ LD +Y Y ++ +
Sbjct: 245 WVKVLLFKNGEDTEPY---QVVNMEYKGNGVWEAVVEGDLDGVFYLYQLENYGKIR-TTV 300
Query: 60 EPY 62
+PY
Sbjct: 301 DPY 303
>sp|A9WT08|DCD_RENSM Deoxycytidine triphosphate deaminase OS=Renibacterium
salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484
/ NBRC 15589 / NCIMB 2235) GN=dcd PE=3 SV=1
Length = 191
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 8/35 (22%), Positives = 22/35 (62%)
Query: 35 VSIRLDSTLRMYNAHTYQHLQDVDIEPYVSKMLDC 69
V +R+D R+++ H Y H+ + +P ++++++
Sbjct: 32 VDVRIDKLFRLFDNHKYAHIDPAEEQPELTRLVEV 66
>sp|Q2UBU2|HIR1_ASPOR Protein HIR1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=HIR1 PE=3 SV=1
Length = 1058
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 20 ESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 59
++ V+ + W+ D + VS+ LDS + +++ HT++ L+ + I
Sbjct: 132 DNDVQDLGWSYDSSILVSVGLDSKVVVWSGHTFEKLKTISI 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,494,939
Number of Sequences: 539616
Number of extensions: 813809
Number of successful extensions: 2435
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2418
Number of HSP's gapped (non-prelim): 24
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)