Query psy2157
Match_columns 71
No_of_seqs 91 out of 106
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 17:46:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 91.6 0.6 2E-05 30.8 6.2 51 6-59 2-53 (304)
2 4ggc_A P55CDC, cell division c 91.5 0.79 2.7E-05 29.2 6.5 53 5-58 53-106 (318)
3 4ggc_A P55CDC, cell division c 91.4 0.32 1.1E-05 31.1 4.6 36 23-59 28-63 (318)
4 4gga_A P55CDC, cell division c 91.0 0.7 2.4E-05 31.8 6.2 53 5-58 133-186 (420)
5 1l0q_A Surface layer protein; 90.3 1.1 3.7E-05 29.8 6.5 50 7-60 234-285 (391)
6 3odt_A Protein DOA1; ubiquitin 89.5 1.5 5E-05 27.8 6.4 54 2-58 3-56 (313)
7 3mkq_A Coatomer beta'-subunit; 89.1 1.1 3.6E-05 33.0 6.2 49 7-58 3-52 (814)
8 4gqb_B Methylosome protein 50; 87.9 2 6.7E-05 29.5 6.6 52 5-59 157-210 (344)
9 3odt_A Protein DOA1; ubiquitin 87.9 1.8 6.1E-05 27.3 6.0 54 6-62 255-308 (313)
10 1l0q_A Surface layer protein; 87.6 1.2 4.1E-05 29.6 5.2 52 6-61 21-74 (391)
11 4h5i_A Guanine nucleotide-exch 86.3 2.9 9.8E-05 28.6 6.7 38 20-57 269-307 (365)
12 4gqb_B Methylosome protein 50; 85.0 2.1 7.3E-05 29.3 5.6 38 20-57 82-119 (344)
13 1pgu_A Actin interacting prote 84.8 3.4 0.00011 28.9 6.5 52 6-57 192-245 (615)
14 3nok_A Glutaminyl cyclase; bet 84.8 3.1 0.00011 29.6 6.4 58 4-61 162-221 (268)
15 4aow_A Guanine nucleotide-bind 84.2 5 0.00017 25.7 6.7 48 4-54 25-74 (340)
16 3k26_A Polycomb protein EED; W 84.0 6.1 0.00021 25.4 7.1 44 15-58 13-61 (366)
17 3g4e_A Regucalcin; six bladed 83.9 5.5 0.00019 26.2 7.1 40 21-60 199-239 (297)
18 4gga_A P55CDC, cell division c 83.8 1.7 5.7E-05 29.9 4.5 37 22-59 107-143 (420)
19 1t9f_A Protein 1D10; structura 83.6 0.46 1.6E-05 31.8 1.6 28 37-64 69-96 (187)
20 3mbr_X Glutamine cyclotransfer 83.5 4.6 0.00016 28.0 6.8 58 4-61 131-190 (243)
21 1pgu_A Actin interacting prote 83.4 2.7 9.2E-05 29.4 5.5 53 5-57 2-59 (615)
22 1nir_A Nitrite reductase; hemo 83.1 3.7 0.00013 30.3 6.5 53 4-60 209-267 (543)
23 3dsm_A Uncharacterized protein 83.0 5 0.00017 27.0 6.7 58 4-61 112-172 (328)
24 3nol_A Glutamine cyclotransfer 82.5 3.3 0.00011 29.2 5.8 58 4-61 153-212 (262)
25 4a11_B DNA excision repair pro 82.5 2.8 9.7E-05 27.4 5.1 51 8-61 325-376 (408)
26 4aow_A Guanine nucleotide-bind 82.4 2.8 9.6E-05 26.9 5.0 53 8-63 206-259 (340)
27 3v7d_B Cell division control p 82.3 4.5 0.00015 27.6 6.3 50 6-58 151-200 (464)
28 1jmx_B Amine dehydrogenase; ox 82.2 5.6 0.00019 25.5 6.4 51 5-60 283-335 (349)
29 1k8k_C P40, ARP2/3 complex 41 82.2 2.2 7.4E-05 27.8 4.4 44 15-58 3-49 (372)
30 3zwl_B Eukaryotic translation 82.2 3.3 0.00011 26.6 5.3 53 6-61 63-116 (369)
31 3frx_A Guanine nucleotide-bind 82.0 2.8 9.6E-05 27.8 5.0 51 8-61 187-238 (319)
32 2ovr_B FBW7, F-BOX/WD repeat p 81.9 5.9 0.0002 27.1 6.8 51 6-57 348-398 (445)
33 3iz6_a 40S ribosomal protein R 81.7 3.8 0.00013 27.8 5.7 52 4-58 53-105 (380)
34 3vgz_A Uncharacterized protein 81.4 5.9 0.0002 25.5 6.3 52 5-60 77-130 (353)
35 2ynn_A Coatomer subunit beta'; 81.3 5.5 0.00019 26.1 6.2 49 8-59 219-268 (304)
36 3vgz_A Uncharacterized protein 80.8 8.9 0.0003 24.7 7.7 57 5-61 214-273 (353)
37 1sq9_A Antiviral protein SKI8; 80.8 4 0.00014 26.9 5.4 53 7-59 217-276 (397)
38 1pby_B Quinohemoprotein amine 80.5 6.8 0.00023 24.9 6.3 40 21-61 280-321 (337)
39 1sq9_A Antiviral protein SKI8; 80.5 5.1 0.00018 26.4 5.9 42 17-59 183-225 (397)
40 1k8k_C P40, ARP2/3 complex 41 79.9 6.6 0.00023 25.4 6.2 42 18-59 200-242 (372)
41 1r5m_A SIR4-interacting protei 79.1 6.2 0.00021 25.8 5.9 41 19-59 288-328 (425)
42 1nir_A Nitrite reductase; hemo 79.0 2.1 7.3E-05 31.6 4.0 41 18-58 476-522 (543)
43 3i2n_A WD repeat-containing pr 78.7 4.4 0.00015 26.0 5.0 42 10-54 314-357 (357)
44 3lrv_A PRE-mRNA-splicing facto 78.4 4 0.00014 27.1 4.8 40 20-59 170-211 (343)
45 3f3f_A Nucleoporin SEH1; struc 78.1 7.5 0.00026 24.3 5.9 42 18-59 304-346 (351)
46 4g56_B MGC81050 protein; prote 78.0 5.8 0.0002 26.9 5.7 51 6-59 170-222 (357)
47 1gxr_A ESG1, transducin-like e 77.5 5 0.00017 25.4 4.9 52 8-62 174-226 (337)
48 3vu4_A KMHSV2; beta-propeller 76.9 3.4 0.00012 27.9 4.2 42 17-58 16-57 (355)
49 1jmx_B Amine dehydrogenase; ox 76.1 11 0.00038 24.1 6.4 53 5-59 29-83 (349)
50 1got_B GT-beta; complex (GTP-b 76.0 8.9 0.00031 25.4 6.1 47 9-58 47-94 (340)
51 2oiz_A Aromatic amine dehydrog 75.5 6 0.00021 27.2 5.3 49 4-57 293-343 (361)
52 3k26_A Polycomb protein EED; W 75.2 13 0.00046 23.7 6.6 48 11-58 58-112 (366)
53 2pbi_B Guanine nucleotide-bind 75.1 11 0.00037 25.4 6.4 47 9-58 56-103 (354)
54 3gre_A Serine/threonine-protei 75.1 9.5 0.00033 25.7 6.1 53 6-59 201-254 (437)
55 4ery_A WD repeat-containing pr 75.1 9.7 0.00033 24.5 5.9 51 8-58 225-276 (312)
56 3zwl_B Eukaryotic translation 75.0 14 0.00047 23.6 6.6 39 20-58 32-71 (369)
57 2ymu_A WD-40 repeat protein; u 74.8 6 0.00021 27.6 5.1 44 10-57 9-53 (577)
58 3lrv_A PRE-mRNA-splicing facto 74.7 5.5 0.00019 26.4 4.8 39 20-58 214-252 (343)
59 4aez_A CDC20, WD repeat-contai 74.2 12 0.0004 25.3 6.4 51 6-58 122-173 (401)
60 3vu4_A KMHSV2; beta-propeller 74.2 6.9 0.00023 26.4 5.2 39 20-58 195-235 (355)
61 3mmy_A MRNA export factor; mRN 74.2 4.6 0.00016 25.9 4.1 37 22-58 275-312 (368)
62 1mda_H Methylamine dehydrogena 74.0 7.2 0.00025 28.0 5.5 54 4-61 301-357 (368)
63 3ei3_B DNA damage-binding prot 73.7 16 0.00056 24.0 6.9 50 6-58 62-113 (383)
64 1vyh_C Platelet-activating fac 73.4 5.3 0.00018 27.5 4.5 49 6-57 139-188 (410)
65 3fm0_A Protein CIAO1; WDR39,SG 73.2 5.9 0.0002 26.5 4.6 46 5-52 3-49 (345)
66 3u4y_A Uncharacterized protein 72.9 11 0.00039 24.1 5.8 41 19-59 174-219 (331)
67 1pby_B Quinohemoprotein amine 72.6 12 0.00042 23.6 5.9 54 6-60 20-75 (337)
68 4g56_B MGC81050 protein; prote 72.6 6.1 0.00021 26.7 4.6 46 9-57 261-308 (357)
69 1yfq_A Cell cycle arrest prote 72.2 6.8 0.00023 25.1 4.6 51 8-58 233-290 (342)
70 2xzm_R RACK1; ribosome, transl 72.0 8.7 0.0003 25.5 5.2 36 20-55 255-290 (343)
71 2iwa_A Glutamine cyclotransfer 71.7 19 0.00065 24.9 7.1 58 4-61 133-192 (266)
72 1gxr_A ESG1, transducin-like e 71.2 7 0.00024 24.7 4.4 39 19-57 50-88 (337)
73 4ery_A WD repeat-containing pr 70.6 15 0.0005 23.6 6.0 48 8-58 14-62 (312)
74 2vdu_B TRNA (guanine-N(7)-)-me 70.3 15 0.00052 25.2 6.3 44 19-63 240-284 (450)
75 3mkq_A Coatomer beta'-subunit; 70.3 14 0.00046 27.1 6.3 50 6-58 44-94 (814)
76 3frx_A Guanine nucleotide-bind 69.9 20 0.0007 23.5 6.8 39 20-58 65-104 (319)
77 3dsm_A Uncharacterized protein 69.3 11 0.00038 25.2 5.3 38 21-58 44-81 (328)
78 1yfq_A Cell cycle arrest prote 69.1 7.2 0.00024 25.0 4.2 41 12-52 3-44 (342)
79 3bws_A Protein LP49; two-domai 68.5 14 0.00047 24.7 5.6 51 7-60 201-253 (433)
80 1n4k_A Inositol 1,4,5-trisphos 68.5 2.2 7.6E-05 31.3 1.8 20 36-55 10-29 (381)
81 3vl1_A 26S proteasome regulato 68.3 13 0.00044 24.7 5.4 48 9-59 173-221 (420)
82 3mmy_A MRNA export factor; mRN 67.9 18 0.00061 23.0 5.9 43 19-61 126-171 (368)
83 3mbr_X Glutamine cyclotransfer 67.9 14 0.00048 25.5 5.7 52 4-60 92-143 (243)
84 1r5m_A SIR4-interacting protei 67.5 7.7 0.00026 25.3 4.1 36 23-58 209-244 (425)
85 3dm0_A Maltose-binding peripla 67.3 9.7 0.00033 28.0 5.0 40 20-59 602-641 (694)
86 3f3f_A Nucleoporin SEH1; struc 67.2 17 0.00057 22.7 5.5 42 18-59 108-152 (351)
87 3i2n_A WD repeat-containing pr 66.5 22 0.00076 22.6 6.3 52 1-55 1-58 (357)
88 1erj_A Transcriptional repress 66.5 16 0.00054 24.8 5.7 40 19-58 63-102 (393)
89 3dwl_C Actin-related protein 2 66.2 14 0.00049 24.1 5.3 36 18-53 203-239 (377)
90 4aez_A CDC20, WD repeat-contai 66.0 16 0.00056 24.6 5.7 39 19-57 348-387 (401)
91 1erj_A Transcriptional repress 65.1 18 0.0006 24.6 5.7 50 8-60 156-206 (393)
92 3mal_A Stromal cell-derived fa 65.0 3.2 0.00011 28.0 1.9 44 21-64 49-107 (199)
93 4h5i_A Guanine nucleotide-exch 64.9 7.8 0.00027 26.4 3.9 42 18-59 131-175 (365)
94 3ow8_A WD repeat-containing pr 64.5 20 0.00069 23.7 5.8 48 7-57 196-244 (321)
95 3bws_A Protein LP49; two-domai 64.4 17 0.00059 24.3 5.5 39 22-60 304-344 (433)
96 1vyh_C Platelet-activating fac 64.2 20 0.00068 24.6 5.9 46 10-58 331-377 (410)
97 2aq5_A Coronin-1A; WD40 repeat 64.1 17 0.00058 24.4 5.4 38 20-57 131-170 (402)
98 3dwl_C Actin-related protein 2 64.0 3.2 0.00011 27.4 1.7 43 14-56 5-50 (377)
99 3nok_A Glutaminyl cyclase; bet 64.0 18 0.00061 25.6 5.7 53 4-61 123-175 (268)
100 1p22_A F-BOX/WD-repeat protein 63.8 18 0.0006 24.7 5.5 47 11-58 124-170 (435)
101 3vl1_A 26S proteasome regulato 63.6 29 0.00099 22.9 6.6 41 18-58 137-178 (420)
102 3ow8_A WD repeat-containing pr 63.2 21 0.00071 23.7 5.7 38 20-57 248-286 (321)
103 1qks_A Cytochrome CD1 nitrite 62.9 29 0.001 26.1 7.0 52 5-60 228-285 (567)
104 4a11_B DNA excision repair pro 62.6 23 0.00078 23.0 5.7 41 18-58 41-83 (408)
105 2ymu_A WD-40 repeat protein; u 62.6 15 0.00051 25.6 5.0 47 7-57 498-545 (577)
106 3gre_A Serine/threonine-protei 62.4 13 0.00046 25.0 4.7 40 19-58 328-367 (437)
107 4e54_B DNA damage-binding prot 61.9 5.3 0.00018 27.5 2.6 41 17-57 293-334 (435)
108 3ei3_B DNA damage-binding prot 61.9 19 0.00065 23.7 5.3 44 6-50 339-382 (383)
109 3jrp_A Fusion protein of prote 60.4 12 0.0004 24.1 3.9 44 11-57 5-51 (379)
110 2pm9_A Protein WEB1, protein t 59.9 34 0.0011 22.4 6.2 38 20-57 214-257 (416)
111 3h2y_A GTPase family protein; 59.9 19 0.00066 25.6 5.4 35 11-50 323-358 (368)
112 3v7d_B Cell division control p 59.7 29 0.001 23.5 6.1 39 20-58 310-349 (464)
113 2ojh_A Uncharacterized protein 59.7 27 0.00092 21.2 6.4 35 20-54 41-76 (297)
114 3fm0_A Protein CIAO1; WDR39,SG 58.1 38 0.0013 22.4 6.5 41 18-58 301-343 (345)
115 2xzm_R RACK1; ribosome, transl 56.9 39 0.0013 22.2 6.5 39 19-57 75-114 (343)
116 1p22_A F-BOX/WD-repeat protein 56.4 42 0.0014 22.8 6.4 49 6-58 285-333 (435)
117 3dm0_A Maltose-binding peripla 56.2 14 0.00048 27.1 4.2 48 9-59 553-601 (694)
118 1pjx_A Dfpase, DIISOPROPYLFLUO 56.1 36 0.0012 21.5 7.9 39 21-59 226-265 (314)
119 1got_B GT-beta; complex (GTP-b 55.7 41 0.0014 22.1 6.3 37 21-57 144-180 (340)
120 3dw8_B Serine/threonine-protei 55.6 42 0.0014 22.3 6.4 40 18-57 175-215 (447)
121 2pm9_A Protein WEB1, protein t 54.8 31 0.0011 22.6 5.4 40 19-58 261-302 (416)
122 1nr0_A Actin interacting prote 54.6 36 0.0012 24.7 6.1 47 8-57 181-228 (611)
123 2oaj_A Protein SNI1; WD40 repe 54.4 29 0.00098 27.2 5.9 36 21-56 212-248 (902)
124 2mad_H Methylamine dehydrogena 54.4 38 0.0013 23.6 6.0 53 4-60 305-361 (373)
125 3iz6_a 40S ribosomal protein R 54.4 22 0.00075 23.9 4.7 41 20-60 249-290 (380)
126 2ovr_B FBW7, F-BOX/WD repeat p 54.2 36 0.0012 23.1 5.7 48 7-58 149-196 (445)
127 2iwa_A Glutamine cyclotransfer 53.4 52 0.0018 22.6 7.3 55 4-60 51-105 (266)
128 1qks_A Cytochrome CD1 nitrite 53.1 22 0.00076 26.7 4.9 41 18-58 500-546 (567)
129 3dw8_B Serine/threonine-protei 52.0 39 0.0013 22.4 5.6 39 22-60 287-326 (447)
130 3ec1_A YQEH GTPase; atnos1, at 51.7 31 0.0011 24.5 5.3 35 11-50 324-359 (369)
131 3sfz_A APAF-1, apoptotic pepti 51.2 42 0.0014 26.2 6.3 48 8-58 648-696 (1249)
132 2oiz_A Aromatic amine dehydrog 50.7 28 0.00095 23.8 4.8 55 5-59 89-150 (361)
133 3nol_A Glutamine cyclotransfer 50.6 61 0.0021 22.6 7.6 56 4-61 72-127 (262)
134 2vdu_B TRNA (guanine-N(7)-)-me 49.7 20 0.00069 24.6 3.9 38 21-58 5-45 (450)
135 2oaj_A Protein SNI1; WD40 repe 49.4 44 0.0015 26.2 6.2 35 19-54 574-609 (902)
136 2hes_X YDR267CP; beta-propelle 48.9 54 0.0018 21.5 6.5 42 5-50 2-43 (330)
137 1nr0_A Actin interacting prote 48.5 34 0.0012 24.8 5.2 42 19-60 238-280 (611)
138 1ri6_A Putative isomerase YBHE 48.4 35 0.0012 21.5 4.7 38 22-59 85-127 (343)
139 2pbi_B Guanine nucleotide-bind 48.1 54 0.0018 21.9 5.8 38 21-58 155-193 (354)
140 2hes_X YDR267CP; beta-propelle 47.9 51 0.0017 21.6 5.6 33 19-51 249-281 (330)
141 1npe_A Nidogen, entactin; glyc 47.1 52 0.0018 20.8 5.5 40 21-60 209-248 (267)
142 2w18_A PALB2, fancn, partner a 44.7 58 0.002 23.8 5.9 30 29-58 190-220 (356)
143 2ghs_A AGR_C_1268P; regucalcin 44.2 67 0.0023 21.3 6.7 38 21-59 230-268 (326)
144 3fvz_A Peptidyl-glycine alpha- 43.5 66 0.0023 21.2 5.6 45 6-50 277-322 (329)
145 3e5z_A Putative gluconolactona 42.9 63 0.0021 20.5 5.7 35 18-52 66-101 (296)
146 3sfz_A APAF-1, apoptotic pepti 42.9 67 0.0023 25.0 6.2 40 19-58 1043-1082(1249)
147 3sjl_D Methylamine dehydrogena 42.3 83 0.0028 22.8 6.4 54 4-61 318-374 (386)
148 1ri6_A Putative isomerase YBHE 42.1 63 0.0021 20.3 6.5 39 20-58 230-274 (343)
149 2xoa_A Ryanodine receptor 1; m 41.8 8.8 0.0003 29.6 1.2 18 38-55 215-232 (559)
150 2w18_A PALB2, fancn, partner a 41.8 56 0.0019 23.9 5.4 53 5-57 211-276 (356)
151 3scy_A Hypothetical bacterial 41.6 71 0.0024 20.8 6.8 46 13-58 251-303 (361)
152 3u4y_A Uncharacterized protein 41.4 66 0.0023 20.4 6.8 50 5-58 28-80 (331)
153 1rwi_B Serine/threonine-protei 41.0 47 0.0016 20.5 4.4 35 21-55 234-269 (270)
154 2aq5_A Coronin-1A; WD40 repeat 40.3 80 0.0027 21.0 6.5 33 21-53 221-257 (402)
155 2dg1_A DRP35, lactonase; beta 38.3 76 0.0026 20.3 5.2 38 21-59 233-271 (333)
156 3scy_A Hypothetical bacterial 38.2 72 0.0025 20.8 5.1 41 18-58 208-252 (361)
157 3uj4_A Inositol 1,4,5-trisphos 38.1 15 0.00051 28.7 2.0 26 37-62 234-259 (604)
158 2ecf_A Dipeptidyl peptidase IV 36.5 21 0.0007 26.1 2.4 50 9-58 25-81 (741)
159 2pm7_B Protein transport prote 36.2 84 0.0029 20.1 6.4 40 9-51 196-239 (297)
160 2pm7_B Protein transport prote 35.9 85 0.0029 20.1 5.6 31 20-50 9-40 (297)
161 3sjl_D Methylamine dehydrogena 35.5 88 0.003 22.7 5.6 56 4-59 116-178 (386)
162 4gq2_M Nucleoporin NUP120; bet 34.7 54 0.0018 26.4 4.7 41 21-61 236-277 (950)
163 2xyi_A Probable histone-bindin 33.7 1.1E+02 0.0038 20.8 6.1 38 20-57 277-317 (430)
164 1mda_H Methylamine dehydrogena 32.9 66 0.0022 22.9 4.5 52 4-60 53-115 (368)
165 2dk7_A Transcription elongatio 31.2 50 0.0017 19.4 3.1 41 16-57 5-46 (73)
166 1xfd_A DIP, dipeptidyl aminope 31.1 93 0.0032 22.4 5.1 48 6-53 46-103 (723)
167 2ecf_A Dipeptidyl peptidase IV 30.7 83 0.0028 22.9 4.8 36 20-55 151-186 (741)
168 2j04_A TAU60, YPL007P, hypothe 29.4 63 0.0021 25.3 4.2 33 20-52 129-162 (588)
169 1q7f_A NHL, brain tumor CG1071 29.3 1.1E+02 0.0037 19.2 6.8 41 10-52 241-282 (286)
170 3hfq_A Uncharacterized protein 28.8 1.2E+02 0.004 19.5 6.9 39 21-59 240-283 (347)
171 4a5s_A Dipeptidyl peptidase 4 28.0 86 0.0029 23.4 4.6 32 23-55 19-50 (740)
172 2mad_H Methylamine dehydrogena 27.8 1.5E+02 0.0052 20.4 5.7 51 5-60 55-116 (373)
173 3c75_H MADH, methylamine dehyd 25.0 1.1E+02 0.0037 22.4 4.6 52 4-60 106-168 (426)
174 1xip_A Nucleoporin NUP159; bet 24.9 65 0.0022 23.3 3.4 30 23-54 90-119 (388)
175 3c75_H MADH, methylamine dehyd 24.3 2.1E+02 0.0071 20.8 6.6 50 4-57 357-409 (426)
176 2j04_B YDR362CP, TAU91; beta p 24.2 1.6E+02 0.0053 21.6 5.4 33 20-52 266-298 (524)
177 2j04_A TAU60, YPL007P, hypothe 24.1 1.5E+02 0.0051 23.1 5.4 33 20-53 182-214 (588)
178 1z68_A Fibroblast activation p 24.1 50 0.0017 24.0 2.6 34 21-54 110-143 (719)
179 3f7f_A Nucleoporin NUP120; nuc 22.0 1.5E+02 0.0053 23.8 5.2 40 19-59 220-259 (729)
180 2xyi_A Probable histone-bindin 21.5 2E+02 0.0067 19.5 5.4 38 14-51 372-411 (430)
181 1z68_A Fibroblast activation p 20.9 69 0.0024 23.3 2.8 32 22-53 61-102 (719)
182 1xfd_A DIP, dipeptidyl aminope 20.6 43 0.0015 24.2 1.7 35 21-55 114-148 (723)
183 2hqs_A Protein TOLB; TOLB, PAL 20.6 1.7E+02 0.0058 20.1 4.7 34 21-54 179-216 (415)
184 2oit_A Nucleoporin 214KDA; NH2 20.4 2.3E+02 0.0077 19.8 5.7 36 19-54 148-185 (434)
185 2j04_B YDR362CP, TAU91; beta p 20.3 94 0.0032 22.8 3.5 40 12-54 303-346 (524)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.59 E-value=0.6 Score=30.79 Aligned_cols=51 Identities=16% Similarity=0.447 Sum_probs=41.8
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecCccccceeeec
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e~LqeVnI 59 (71)
.+++++.|.-|.+ .|++++.+-+|-+++--. +.++|+|..+|.+.+..+..
T Consensus 2 ~l~~~~~~~~h~~---~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~ 53 (304)
T 2ynn_A 2 KLDIKKTFSNRSD---RVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV 53 (304)
T ss_dssp CCCCEEEEEEECS---CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cceeEEeecCCCC---ceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec
Confidence 3577888988876 599999999998887654 89999999999888776653
No 2
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.48 E-value=0.79 Score=29.20 Aligned_cols=53 Identities=6% Similarity=0.347 Sum_probs=41.2
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccceeee
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~LqeVn 58 (71)
+|.+..+.|+.+.. ...|++++++-+|=.++. ..+.++|+|..++.+.++...
T Consensus 53 ~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 53 SSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp TTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 45666677766543 478999999999877655 458999999999999887764
No 3
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.39 E-value=0.32 Score=31.06 Aligned_cols=36 Identities=17% Similarity=0.430 Sum_probs=31.2
Q ss_pred eeEEEEeCCeEEEEEecCCeEeEEecCccccceeeec
Q psy2157 23 VRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 23 V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
.++|+|+.+| -+|.-.+.++|+|..+|.+.++-+..
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~ 63 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQM 63 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEe
Confidence 5789999999 48999999999999999998876654
No 4
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.98 E-value=0.7 Score=31.82 Aligned_cols=53 Identities=6% Similarity=0.341 Sum_probs=41.8
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
+|.++.+.++.+... ..|++++++.+|-.++.- .+.++++|..++.+.+....
T Consensus 133 ~tg~~~~~~~~~~~~-~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 133 SSGDILQLLQMEQPG-EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp TTCCEEEEEECCSTT-CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCEEEEEEecCCC-CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Confidence 456667777765443 689999999999888765 58999999999998877654
No 5
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=90.35 E-value=1.1 Score=29.83 Aligned_cols=50 Identities=12% Similarity=0.220 Sum_probs=37.8
Q ss_pred eeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 7 MNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 7 l~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
.+..+.+..+ ..+..++++.+| +|++...+..+++|...+.+.++.+.+.
T Consensus 234 ~~~~~~~~~~----~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 234 NKITARIPVG----PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp TEEEEEEECC----SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEEecC----CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence 3444455543 357889998665 7888888999999999999998887643
No 6
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.51 E-value=1.5 Score=27.75 Aligned_cols=54 Identities=19% Similarity=0.207 Sum_probs=40.0
Q ss_pred CCCcceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 2 DWLDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 2 ~~~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
|.....+..+.|..|. ..|++++....+.=++-..+..+++|...+.+.+..+.
T Consensus 3 d~~~~~~~~~~l~~h~---~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~ 56 (313)
T 3odt_A 3 DPFTGYQLSATLKGHD---QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVY 56 (313)
T ss_dssp --CCCCEEEEEECCCS---SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEE
T ss_pred CccccHHHHHHhhCCC---CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEee
Confidence 4455667777887765 56999998666677777789999999998887665544
No 7
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.10 E-value=1.1 Score=33.00 Aligned_cols=49 Identities=16% Similarity=0.447 Sum_probs=41.8
Q ss_pred eeeeEEEeeecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecCccccceeee
Q psy2157 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 7 l~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e~LqeVn 58 (71)
+++++.|+.|++ .|++++++-+|-|++.-. +..+++|...+.+.++.+.
T Consensus 3 l~~~~~~~~h~~---~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~ 52 (814)
T 3mkq_A 3 LDIKKTFSNRSD---RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ 52 (814)
T ss_dssp CCCEEEEEEECS---CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccceeeecCCC---ceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe
Confidence 567788888875 599999999999999876 7799999999988877765
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.88 E-value=2 Score=29.47 Aligned_cols=52 Identities=15% Similarity=0.224 Sum_probs=39.4
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeec
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
++.+..+.|..|. ..|.+++++.+| +-++-..+.++|+|...+.+.+..+..
T Consensus 157 ~~~~~~~~~~~h~---~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 210 (344)
T 4gqb_B 157 AQQVVLSSYRAHA---AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC 210 (344)
T ss_dssp TTTEEEEEECCCS---SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-
T ss_pred CCCcEEEEEcCcC---CceEEEEecCCCCCceeeeccccccccccccccceeeeeec
Confidence 3445556666554 579999987655 778888999999999999998877643
No 9
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.87 E-value=1.8 Score=27.35 Aligned_cols=54 Identities=7% Similarity=0.124 Sum_probs=38.2
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecchh
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 62 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap~ 62 (71)
+.+..+.|..+ ..+|..++++-+|-.++-..+..|++|...+.+.+.+..+...
T Consensus 255 ~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~~~~~~ 308 (313)
T 3odt_A 255 NGSLKQVITLP---AISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASEDEIKGE 308 (313)
T ss_dssp TCCEEEEEECS---SSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC-------
T ss_pred CCceeEEEecc---CceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehhhhhhh
Confidence 34445556554 3579999999999888888999999999999998888776543
No 10
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.65 E-value=1.2 Score=29.61 Aligned_cols=52 Identities=12% Similarity=0.081 Sum_probs=38.1
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEE--EEEecCCeEeEEecCccccceeeecch
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVW--VSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVW--iS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
+.+..+.+..+ ..+.+++++.+|=+ ++-..+.+|++|...+.+.++.+....
T Consensus 21 ~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 21 SNKVTATIPVG----SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp TTEEEEEEECS----SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCeEEEEeecC----CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC
Confidence 34455555543 35899999988854 455579999999999999988877544
No 11
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.28 E-value=2.9 Score=28.58 Aligned_cols=38 Identities=8% Similarity=0.044 Sum_probs=32.9
Q ss_pred CCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceee
Q psy2157 20 ESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeV 57 (71)
...|.+++.+-+|-.++.- .+.++|+|...|.+.++.+
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 4679999999999988875 5899999999999988765
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.04 E-value=2.1 Score=29.29 Aligned_cols=38 Identities=16% Similarity=0.307 Sum_probs=32.9
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceee
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeV 57 (71)
+..|.++++++++.-++-..+.+||+|...+.+.+...
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~ 119 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVS 119 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEE
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEe
Confidence 45799999999999999999999999999998766543
No 13
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.84 E-value=3.4 Score=28.88 Aligned_cols=52 Identities=23% Similarity=0.429 Sum_probs=40.9
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCC-eEEEEE-ecCCeEeEEecCccccceee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGD-GVWVSI-RLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~-GVWiS~-~~~s~lrLfHa~T~e~LqeV 57 (71)
+.+..+.|..|.+.+..|.+++++-+ |-++.. ..+..+++|...+.+.++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 192 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 44555667766665558999999988 877765 45899999999999988877
No 14
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=84.77 E-value=3.1 Score=29.57 Aligned_cols=58 Identities=12% Similarity=0.121 Sum_probs=49.7
Q ss_pred CcceeeeEEEeeecCC--CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~--~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|+++.+++++..+. -..++-|.+.+.-+|+..-.+..|....+.|.+-+..||++.
T Consensus 162 p~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 162 PDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp TTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred CCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 6789999999997654 224567888888999999989999999999999999999875
No 15
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=84.19 E-value=5 Score=25.65 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=36.0
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCC-e-EEEEEecCCeEeEEecCccccc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGD-G-VWVSIRLDSTLRMYNAHTYQHL 54 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~-G-VWiS~~~~s~lrLfHa~T~e~L 54 (71)
.+++++.++++-|.+ .|++++++-+ | .=++-..|.+||+|...+.+..
T Consensus 25 ~~~~~l~~tL~GH~~---~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~ 74 (340)
T 4aow_A 25 TEQMTLRGTLKGHNG---WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN 74 (340)
T ss_dssp -CEEEEEEEECCCSS---CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC
T ss_pred CCceEEEEEECCccC---CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 567788888887754 6999999854 4 4456788999999998776543
No 16
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=83.97 E-value=6.1 Score=25.35 Aligned_cols=44 Identities=9% Similarity=0.219 Sum_probs=35.3
Q ss_pred eecCCCCceeEEEEe-----CCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 15 AHPRRESQVRQMTWA-----GDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 15 v~~d~~~~V~~Ma~~-----g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
.......+|.+++.+ |.+.-++-..+..+++|...+.+.++.+.
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~ 61 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQ 61 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeee
Confidence 344556899999998 67777777777799999999988876665
No 17
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=83.85 E-value=5.5 Score=26.15 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=33.9
Q ss_pred CceeEEEEeCC-eEEEEEecCCeEeEEecCccccceeeecc
Q psy2157 21 SQVRQMTWAGD-GVWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 21 ~~V~~Ma~~g~-GVWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
..+..|+...+ .+|++...+..|..|...|.+.+..|.+.
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 56778887654 59999999999999999999999988764
No 18
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.75 E-value=1.7 Score=29.90 Aligned_cols=37 Identities=19% Similarity=0.457 Sum_probs=31.2
Q ss_pred ceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeec
Q psy2157 22 QVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 22 ~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
-.++|+|+..++ +|+-.+.++|||.+.|.+.++-++.
T Consensus 107 y~~~l~wS~~n~-lAvgld~tV~lWd~~tg~~~~~~~~ 143 (420)
T 4gga_A 107 YLNLVDWSSGNV-LAVALDNSVYLWSASSGDILQLLQM 143 (420)
T ss_dssp TCBCEEECTTSE-EEEEETTEEEEEETTTCCEEEEEEC
T ss_pred cceeEEECCCCE-EEEEeCCEEEEEECCCCCEEEEEEe
Confidence 357799998885 8999999999999999987776654
No 19
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=83.58 E-value=0.46 Score=31.78 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=23.3
Q ss_pred EecCCeEeEEecCccccceeeecchhhH
Q psy2157 37 IRLDSTLRMYNAHTYQHLQDVDIEPYVS 64 (71)
Q Consensus 37 ~~~~s~lrLfHa~T~e~LqeVnIap~V~ 64 (71)
++.+..|||+|..|-+.|--=+++++++
T Consensus 69 v~~Gd~IRL~H~~T~~~Lhsh~~~~p~s 96 (187)
T 1t9f_A 69 IKCGDKIRLKHLTTGTFLHSHHFTAPLS 96 (187)
T ss_dssp CCTTCEEEEEETTTCCEEEEEEEECSSC
T ss_pred eccCCEEEEEECCCCCCEeECCcCCCCC
Confidence 3567899999999999998777777765
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=83.46 E-value=4.6 Score=28.02 Aligned_cols=58 Identities=10% Similarity=0.224 Sum_probs=49.2
Q ss_pred CcceeeeEEEeeecCC--CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~--~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|+++.+++++..+. -..+.-|.+.+.-+|+..-.+..|..-.+.|.+-+..||+++
T Consensus 131 p~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 131 PDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp TTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred CCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence 6789999999997643 235567888888899999889999999999999999999774
No 21
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=83.35 E-value=2.7 Score=29.38 Aligned_cols=53 Identities=2% Similarity=0.058 Sum_probs=44.0
Q ss_pred cceeeeEEEeeecC-CCCceeEEEEeCCeEEEEEecCCeEeEEecCcc----ccceee
Q psy2157 5 DPMNFQKSFDAHPR-RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY----QHLQDV 57 (71)
Q Consensus 5 ~tl~ve~~f~v~~d-~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~----e~LqeV 57 (71)
.+++.++.|...+. ....|.+++++-+|=++++-.+..+++|...+. +.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~ 59 (615)
T 1pgu_A 2 SSISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQF 59 (615)
T ss_dssp CCEEEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEE
T ss_pred CccchhhccCCCCCCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEE
Confidence 56788888886644 457899999999999999999999999999988 665554
No 22
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=83.14 E-value=3.7 Score=30.32 Aligned_cols=53 Identities=8% Similarity=0.033 Sum_probs=40.5
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeC----CeEEEEE--ecCCeEeEEecCccccceeeecc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAG----DGVWVSI--RLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g----~GVWiS~--~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
.+++++...+.. +..+++++.+- +|=++.+ ..+.++++|.+.|.+.++.|...
T Consensus 209 ~~t~~~~~~i~~----g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 209 AKEPTKVAEIKI----GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp SSSCEEEEEEEC----CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC
T ss_pred CCCCcEEEEEec----CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc
Confidence 357777777764 45689999886 7755544 45899999999999999999863
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=83.00 E-value=5 Score=26.98 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=44.1
Q ss_pred CcceeeeEEEeeecC--CCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPR--RESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d--~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|.++.+.+++... ....+..|+..|.-+|++-. .+..|..|...|.+.++.+.+..
T Consensus 112 ~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~ 172 (328)
T 3dsm_A 112 PKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI 172 (328)
T ss_dssp TTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS
T ss_pred CCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC
Confidence 356677777777551 11256778889999999987 48899999999999988887643
No 24
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=82.54 E-value=3.3 Score=29.16 Aligned_cols=58 Identities=5% Similarity=0.203 Sum_probs=48.3
Q ss_pred CcceeeeEEEeeecCC--CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~--~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|+++.+..+|..+. -..++-|.+.+.-+|+..-.+..|..-.+.|.+-+..||++.
T Consensus 153 p~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~ 212 (262)
T 3nol_A 153 PESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNG 212 (262)
T ss_dssp TTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred CCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence 6788999999997532 233455888888999999999999999999999999999864
No 25
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=82.52 E-value=2.8 Score=27.40 Aligned_cols=51 Identities=12% Similarity=0.074 Sum_probs=29.6
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeeecch
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVnIap 61 (71)
+....|..| ...|.+++++-+|-.++.- .+..|++|...+.+.+.+.+-..
T Consensus 325 ~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 376 (408)
T 4a11_B 325 EQITMLKGH---YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT 376 (408)
T ss_dssp CEEEEECCC---SSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------
T ss_pred cceeeeccC---CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE
Confidence 334445444 3679999999888665544 58999999999999998766443
No 26
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=82.41 E-value=2.8 Score=26.86 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=38.7
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccceeeecchhh
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVDIEPYV 63 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~LqeVnIap~V 63 (71)
+....|..| ..+|++++.+-+|-.++. ..+.++++|...+.+++..++-...+
T Consensus 206 ~~~~~~~~h---~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v 259 (340)
T 4aow_A 206 KLKTNHIGH---TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDII 259 (340)
T ss_dssp EEEEEECCC---SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCE
T ss_pred ceeeEecCC---CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceE
Confidence 344455444 357999999888766654 56899999999999998887755443
No 27
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=82.30 E-value=4.5 Score=27.62 Aligned_cols=50 Identities=20% Similarity=0.300 Sum_probs=38.2
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..+.|..| ...|.+++++.+|.=++-..+.++++|...+.+.++.+.
T Consensus 151 ~~~~~~~~~~h---~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~ 200 (464)
T 3v7d_B 151 NKKFLLQLSGH---DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFE 200 (464)
T ss_dssp TTEEEEEECCC---SSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCcEEEEEeCC---CcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEEC
Confidence 33444455533 467999999988877888889999999999988776654
No 28
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=82.23 E-value=5.6 Score=25.52 Aligned_cols=51 Identities=10% Similarity=0.290 Sum_probs=36.5
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
++.++.+.+.. +..+..++++.+| ++++ ..+..|++|...|.+.+..+.+.
T Consensus 283 ~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 283 KQRKLIKAANL----DHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTTEEEEEEEC----SSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTTEEEEEEECS
T ss_pred ccCeEEEEEcC----CCCccceEECCCCCEEEEe-cCCCeEEEEeccccceeeeeecC
Confidence 34455555553 2457789998776 6654 45789999999999999988764
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=82.19 E-value=2.2 Score=27.76 Aligned_cols=44 Identities=11% Similarity=0.279 Sum_probs=34.8
Q ss_pred eecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccc--cceeee
Q psy2157 15 AHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQ--HLQDVD 58 (71)
Q Consensus 15 v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e--~LqeVn 58 (71)
+++..+.+|.+++++.+|=.++.- .+..+++|...+.+ .+..+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~ 49 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK 49 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec
Confidence 344456789999999999888887 69999999998876 555543
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.15 E-value=3.3 Score=26.59 Aligned_cols=53 Identities=8% Similarity=0.046 Sum_probs=38.1
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceeeecch
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
+.+..+.|..| ...|.+++++.+|-.+. ...+..+++|...+.+.+..+....
T Consensus 63 ~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 116 (369)
T 3zwl_B 63 NGERLGTLDGH---TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPV 116 (369)
T ss_dssp TCCEEEEECCC---SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS
T ss_pred Cchhhhhhhhc---CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCC
Confidence 34444455544 45799999998775554 4568999999999999888876433
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=81.98 E-value=2.8 Score=27.77 Aligned_cols=51 Identities=16% Similarity=0.325 Sum_probs=38.0
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeeecch
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVnIap 61 (71)
+.+..|..| ...|.+++.+-+|-.++-- .+.++|+|...+.+.+..+.-..
T Consensus 187 ~~~~~~~~h---~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 238 (319)
T 3frx_A 187 QIEADFIGH---NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD 238 (319)
T ss_dssp EEEEEECCC---CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS
T ss_pred hhheeecCC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 444455444 3579999999988777654 58999999999998887776433
No 32
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=81.90 E-value=5.9 Score=27.06 Aligned_cols=51 Identities=10% Similarity=0.247 Sum_probs=39.6
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeV 57 (71)
+.+....|..+......|.+++..| ..-++-..+..+++|...+.+.+..+
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEEEEECCCCceeeee
Confidence 3445556766656678899999975 55666677999999999999998877
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=81.72 E-value=3.8 Score=27.78 Aligned_cols=52 Identities=19% Similarity=0.417 Sum_probs=38.7
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceeee
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVn 58 (71)
+..+...+.|+-|. ..|.+++++-+|=+++ -..+.++|+|...|.+.+..+.
T Consensus 53 ~~~~~~~~~l~gH~---~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~ 105 (380)
T 3iz6_a 53 PTDLVCCRTLQGHS---GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK 105 (380)
T ss_dssp CCCCEEEEEECCCS---SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cceeEEeecccccc---cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe
Confidence 34455556676664 5699999998887665 4569999999999988776654
No 34
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=81.43 E-value=5.9 Score=25.51 Aligned_cols=52 Identities=10% Similarity=0.146 Sum_probs=38.7
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
++.++.+.+... ..+..++.+.+| +|++-..+..|++|...|.+.+..+...
T Consensus 77 ~~~~~~~~~~~~----~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 130 (353)
T 3vgz_A 77 VTLEVTQAIHND----LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLD 130 (353)
T ss_dssp TTCCEEEEEEES----SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESC
T ss_pred CCCeEEEEEecC----CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecC
Confidence 345556666543 346778887766 7888888899999999999988887763
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=81.32 E-value=5.5 Score=26.05 Aligned_cols=49 Identities=20% Similarity=0.297 Sum_probs=36.8
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeeec
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
+....|+.|. ..|..++...+|-++ +-..+.++|+|...|++.++.++.
T Consensus 219 ~~~~~~~~h~---~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~ 268 (304)
T 2ynn_A 219 SCVATLEGHM---SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (304)
T ss_dssp EEEEEEECCS---SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred ccceeeCCCC---CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC
Confidence 3444565554 568999988877555 455699999999999999888764
No 36
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=80.84 E-value=8.9 Score=24.66 Aligned_cols=57 Identities=5% Similarity=-0.000 Sum_probs=41.5
Q ss_pred cceeeeEEEeeecC-CCCceeEEEEeCC--eEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 5 DPMNFQKSFDAHPR-RESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 5 ~tl~ve~~f~v~~d-~~~~V~~Ma~~g~--GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
.+.++...+..... ....+..++.+-+ -+|++-..+..+++|...+.+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 214 ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 34455566666443 3456778888844 478887778999999999999998887644
No 37
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=80.79 E-value=4 Score=26.92 Aligned_cols=53 Identities=9% Similarity=0.301 Sum_probs=39.4
Q ss_pred eeeeEEEee---ecCCCCceeEEEEeCCeEEEEEec-C---CeEeEEecCccccceeeec
Q psy2157 7 MNFQKSFDA---HPRRESQVRQMTWAGDGVWVSIRL-D---STLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 7 l~ve~~f~v---~~d~~~~V~~Ma~~g~GVWiS~~~-~---s~lrLfHa~T~e~LqeVnI 59 (71)
.+....|+. |......|.+++++-+|-+++... + ..|++|...+.+.+..+.-
T Consensus 217 ~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 217 LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 445556766 544478899999998887777665 4 7999999999988887653
No 38
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=80.52 E-value=6.8 Score=24.86 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=32.3
Q ss_pred CceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecch
Q psy2157 21 SQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 21 ~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
..+..++.+.+| ++++ ..+..|++|...|.+.++.+.+..
T Consensus 280 ~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 280 HSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp SCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCCEEEEEECGG
T ss_pred CceeeEEECCCCCEEEEE-cCCCcEEEEECcCCcEEEEEEcCC
Confidence 457888988776 5665 458899999999999999988764
No 39
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=80.45 E-value=5.1 Score=26.37 Aligned_cols=42 Identities=10% Similarity=0.134 Sum_probs=34.4
Q ss_pred cCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeeec
Q psy2157 17 PRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 17 ~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVnI 59 (71)
......|.++++..+| .+..- .+..+++|...+.+.+..+..
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEec
Confidence 4456789999999999 66554 489999999999988888775
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=79.93 E-value=6.6 Score=25.41 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=32.9
Q ss_pred CCCCceeEEEEeCCeEE-EEEecCCeEeEEecCccccceeeec
Q psy2157 18 RRESQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 18 d~~~~V~~Ma~~g~GVW-iS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
.....|.+++++-+|-. ++-..+..+++|...+.+.+..+..
T Consensus 200 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 200 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 44568999999888744 4455689999999999998877763
No 41
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=79.15 E-value=6.2 Score=25.83 Aligned_cols=41 Identities=17% Similarity=0.380 Sum_probs=34.7
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeec
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
....|.++++..+|.-++...+..+++|...+.+.++.+..
T Consensus 288 ~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 288 HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp CSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 34689999999999777777899999999999988877664
No 42
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=79.01 E-value=2.1 Score=31.58 Aligned_cols=41 Identities=27% Similarity=0.362 Sum_probs=33.7
Q ss_pred CCCCceeEEEEe--CCeEEEEEec----CCeEeEEecCccccceeee
Q psy2157 18 RRESQVRQMTWA--GDGVWVSIRL----DSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 18 d~~~~V~~Ma~~--g~GVWiS~~~----~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..|.+++.. |.-||+|..+ ++.|.+|...|.+.+..|.
T Consensus 476 ~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 476 EGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp SSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 446788899987 5558888763 6999999999999998887
No 43
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.74 E-value=4.4 Score=26.01 Aligned_cols=42 Identities=12% Similarity=0.281 Sum_probs=29.4
Q ss_pred eEEEeeecCCCCceeEEEEeCCeEEEE--EecCCeEeEEecCccccc
Q psy2157 10 QKSFDAHPRRESQVRQMTWAGDGVWVS--IRLDSTLRMYNAHTYQHL 54 (71)
Q Consensus 10 e~~f~v~~d~~~~V~~Ma~~g~GVWiS--~~~~s~lrLfHa~T~e~L 54 (71)
...+..| ...|.+++++-+|-++. -..+..+|+|...+++.+
T Consensus 314 ~~~~~~~---~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 314 LQNVTLS---TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp EEEEECC---SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC----
T ss_pred eeccccC---CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcccC
Confidence 3344444 46899999998887775 567999999999887653
No 44
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=78.38 E-value=4 Score=27.08 Aligned_cols=40 Identities=13% Similarity=0.229 Sum_probs=33.6
Q ss_pred CCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccc-eeeec
Q psy2157 20 ESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHL-QDVDI 59 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~L-qeVnI 59 (71)
...|.++++.-+|-.++. ..+..+|+|...+.+.+ ..+..
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 356999999999999987 67999999999998877 55544
No 45
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=78.07 E-value=7.5 Score=24.32 Aligned_cols=42 Identities=17% Similarity=0.360 Sum_probs=32.4
Q ss_pred CCCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeeec
Q psy2157 18 RRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 18 d~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
.....|.+++++-+|-.+ +-..+..||+|...+.+.++.+..
T Consensus 304 ~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 304 DHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp TTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred cccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence 344679999998877554 455699999999999877776654
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=77.96 E-value=5.8 Score=26.86 Aligned_cols=51 Identities=20% Similarity=0.333 Sum_probs=38.1
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeC--CeEEEEEecCCeEeEEecCccccceeeec
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAG--DGVWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g--~GVWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
+.+....|+.|. ..|++++.+. .++-++...+.++|+|...+.+.+..+..
T Consensus 170 ~~~~~~~~~~h~---~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~ 222 (357)
T 4g56_B 170 QKAVLKSYNAHS---SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF 222 (357)
T ss_dssp TTEEEEEECCCS---SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC
T ss_pred CCcEEEEEcCCC---CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee
Confidence 444555666554 5699999864 45788888999999999999888776653
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=77.49 E-value=5 Score=25.43 Aligned_cols=52 Identities=19% Similarity=0.310 Sum_probs=37.8
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeeecchh
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDIEPY 62 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVnIap~ 62 (71)
+..+.|.. ....|.++++..+|-++... .+..+++|...+.+.+..++...+
T Consensus 174 ~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 226 (337)
T 1gxr_A 174 TLVRQFQG---HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQ 226 (337)
T ss_dssp EEEEEECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC
T ss_pred ceeeeeec---ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCc
Confidence 34444544 34679999999888666554 588999999999998887765443
No 48
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=76.88 E-value=3.4 Score=27.94 Aligned_cols=42 Identities=14% Similarity=0.289 Sum_probs=33.8
Q ss_pred cCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 17 PRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 17 ~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
+.....|.+++.+-+|-.++.-.+..+|+|..++.+.+...+
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~ 57 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQE 57 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeee
Confidence 444678999999999999999988899999999887765544
No 49
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=76.10 E-value=11 Score=24.05 Aligned_cols=53 Identities=11% Similarity=-0.009 Sum_probs=39.0
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeec
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
++.++.+.+..... ..+..++.+-+| ++++-..+..|++|...|.+.+..+.+
T Consensus 29 ~~~~~~~~~~~~~~--~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 29 ASDTVYKSCVMPDK--FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp TTTEEEEEEECSSC--CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred CCCcEEEEEecCCC--CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 34555666665431 257788888776 777777789999999999998887775
No 50
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=75.97 E-value=8.9 Score=25.43 Aligned_cols=47 Identities=15% Similarity=0.368 Sum_probs=35.6
Q ss_pred eeEEEeeecCCCCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceeee
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVn 58 (71)
..+.|..|. ..|.+++++.+|-.++ -..+.++|+|...+.+.+..+.
T Consensus 47 ~~~~l~gH~---~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~ 94 (340)
T 1got_B 47 TRRTLRGHL---AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP 94 (340)
T ss_dssp EEEEECCCS---SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred hheeecCCC---CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee
Confidence 344555554 5799999998886665 4569999999999988877665
No 51
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=75.52 E-value=6 Score=27.17 Aligned_cols=49 Identities=8% Similarity=0.032 Sum_probs=38.7
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCcc--ccceee
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY--QHLQDV 57 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~--e~LqeV 57 (71)
++|.++.+.+.++. +..++.+-+|=++...++.+|++|.+.|. +.++.|
T Consensus 293 ~~t~~~v~~i~~~~-----p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 293 TKTKQRVARIPGRD-----ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp TTTTEEEEEEECTT-----CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEE
T ss_pred CCCCcEEEEEecCC-----eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEe
Confidence 34567777776654 88899888877777777799999999999 888876
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=75.23 E-value=13 Score=23.68 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=35.2
Q ss_pred EEEeeecC--CCCceeEEEEeCC----eEEEEE-ecCCeEeEEecCccccceeee
Q psy2157 11 KSFDAHPR--RESQVRQMTWAGD----GVWVSI-RLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 11 ~~f~v~~d--~~~~V~~Ma~~g~----GVWiS~-~~~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..+.+ .+..|.+++++-+ |-.++. ..+..|++|...+.+.++.+.
T Consensus 58 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 112 (366)
T 3k26_A 58 RLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV 112 (366)
T ss_dssp EEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE
T ss_pred EeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec
Confidence 34544443 4578999999877 545544 568899999999999887765
No 53
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=75.14 E-value=11 Score=25.37 Aligned_cols=47 Identities=17% Similarity=0.324 Sum_probs=35.6
Q ss_pred eeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
..+.|+-|. ..|.+++++-+|-+++-- .+.++|+|...+.+.+..+.
T Consensus 56 ~~~~l~gH~---~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~ 103 (354)
T 2pbi_B 56 TRRTLKGHG---NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT 103 (354)
T ss_dssp EEEEEECCS---SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEecCCC---CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe
Confidence 345566554 469999999888776544 59999999999988776654
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=75.14 E-value=9.5 Score=25.73 Aligned_cols=53 Identities=6% Similarity=0.148 Sum_probs=38.9
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeeec
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVnI 59 (71)
+.+....|+.++ ....|.+++.+.+|-+++.- .+.+|++|...+.+.+..+.+
T Consensus 201 ~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 254 (437)
T 3gre_A 201 TLERLQIIENSP-RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF 254 (437)
T ss_dssp TCCEEEEEECCG-GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC
T ss_pred CCeeeEEEccCC-CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec
Confidence 344455566532 23589999999888887755 589999999999888887653
No 55
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=75.05 E-value=9.7 Score=24.46 Aligned_cols=51 Identities=16% Similarity=0.273 Sum_probs=35.2
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccceeee
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~LqeVn 58 (71)
+..+.|..|......+.......+|-|+.. ..+..||+|...+.+.++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 276 (312)
T 4ery_A 225 KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ 276 (312)
T ss_dssp EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC
T ss_pred cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh
Confidence 445566666665555555555556666554 458899999999999887764
No 56
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=74.95 E-value=14 Score=23.61 Aligned_cols=39 Identities=18% Similarity=0.252 Sum_probs=32.4
Q ss_pred CCceeEEEEeCCeEEEEEec-CCeEeEEecCccccceeee
Q psy2157 20 ESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e~LqeVn 58 (71)
...|.+++++.+|=+++.-. +..+++|...+.+.++.+.
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 71 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD 71 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh
Confidence 36799999999998777754 8899999999988877664
No 57
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=74.83 E-value=6 Score=27.65 Aligned_cols=44 Identities=27% Similarity=0.454 Sum_probs=33.3
Q ss_pred eEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceee
Q psy2157 10 QKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 10 e~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeV 57 (71)
++.|+.|.+ .|++++.+-+|-+++.- .+.++|+|.. +.+.++.+
T Consensus 9 ~~~L~GH~~---~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l 53 (577)
T 2ymu_A 9 RNRLEAHSS---SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 53 (577)
T ss_dssp EEEECCCSS---CEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred eeEECCCCC---cEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEE
Confidence 356777755 69999999999888654 5789999995 56666544
No 58
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=74.71 E-value=5.5 Score=26.35 Aligned_cols=39 Identities=15% Similarity=0.415 Sum_probs=33.3
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
..+|.+++.+-+|-+++...+.++|+|...+.+.++.+.
T Consensus 214 ~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~ 252 (343)
T 3lrv_A 214 EAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYP 252 (343)
T ss_dssp TSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSC
T ss_pred CCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeec
Confidence 468999999999999988887799999999988765443
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=74.22 E-value=12 Score=25.35 Aligned_cols=51 Identities=14% Similarity=0.358 Sum_probs=38.1
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..+.++.. ....|.+++++.+|-.++.- .+..+++|...+.+.++.+.
T Consensus 122 ~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 122 SGSVSALAETD--ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp TCCEEEEEECC--TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCcEeEeeecC--CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec
Confidence 33444445443 45789999999998777766 48899999999998887764
No 60
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=74.22 E-value=6.9 Score=26.39 Aligned_cols=39 Identities=10% Similarity=0.206 Sum_probs=32.7
Q ss_pred CCceeEEEEeCCeEEEEEe-cCCe-EeEEecCccccceeee
Q psy2157 20 ESQVRQMTWAGDGVWVSIR-LDST-LRMYNAHTYQHLQDVD 58 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~-~~s~-lrLfHa~T~e~LqeVn 58 (71)
...|++++++-+|-+++-- .+.+ +|+|...+.+.+..+.
T Consensus 195 ~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 195 TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 4679999999999877654 5887 9999999999888775
No 61
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=74.21 E-value=4.6 Score=25.89 Aligned_cols=37 Identities=8% Similarity=0.138 Sum_probs=30.7
Q ss_pred ceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 22 QVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 22 ~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
.|.+++++.+|-.++.- .+..|++|...+.+.++.+.
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 69999999888655554 58999999999998887765
No 62
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=74.00 E-value=7.2 Score=27.96 Aligned_cols=54 Identities=15% Similarity=0.108 Sum_probs=43.4
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEe-cCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~-~~s~lrLfHa~T~e~LqeVnIap 61 (71)
+.|+++.+.+.+.. .+..|+.+.+| +|++.. .+.++..+.+.|.+.+..|.+-.
T Consensus 301 ~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 301 ASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp SSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 35666777777665 47888888776 899999 69999999999999999887643
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=73.74 E-value=16 Score=24.04 Aligned_cols=50 Identities=4% Similarity=0.134 Sum_probs=37.2
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
+.++.+.+..|. ..|.+++++.+| .=++-..+..+++|...+.+....+.
T Consensus 62 ~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 113 (383)
T 3ei3_B 62 SYKLHRTASPFD---RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ 113 (383)
T ss_dssp TCEEEEEECCCS---SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC
T ss_pred ccceEEeccCCC---CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee
Confidence 445556665554 679999999998 55555668999999999887776654
No 64
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=73.39 E-value=5.3 Score=27.54 Aligned_cols=49 Identities=14% Similarity=0.465 Sum_probs=36.2
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeV 57 (71)
+.+..+.|..|.+ .|.+++++.+|-.+ +-..+.++|+|...+++.+..+
T Consensus 139 ~~~~~~~l~~h~~---~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 139 TGDFERTLKGHTD---SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp TCCCCEEECCCSS---CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC
T ss_pred CCcEEEEEeccCC---cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Confidence 4455566766554 69999998877555 4556999999999998877654
No 65
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=73.19 E-value=5.9 Score=26.46 Aligned_cols=46 Identities=20% Similarity=0.373 Sum_probs=35.8
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccc
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQ 52 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e 52 (71)
+.++..+.|..|++ ..|..++++-+|-.++.- .+.++|+|..++.+
T Consensus 3 ~~~~~~~~~~~h~~--~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~ 49 (345)
T 3fm0_A 3 DSLVLLGRVPAHPD--SRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDS 49 (345)
T ss_dssp -CEEEEEEECCSTT--SCEEEEEECTTSSCEEEEETTSCEEEEEEETTE
T ss_pred ccEEEeeeecCCCC--CcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCc
Confidence 45677778888765 579999999999887654 58999999887654
No 66
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=72.93 E-value=11 Score=24.14 Aligned_cols=41 Identities=15% Similarity=0.318 Sum_probs=33.1
Q ss_pred CCCceeEEEEeCCe--EEEEEecCCeEeEEecCcccc---ceeeec
Q psy2157 19 RESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQH---LQDVDI 59 (71)
Q Consensus 19 ~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~---LqeVnI 59 (71)
.+..++.++.+.+| ++++-..+..+++|...+.+. ++.+..
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC
Confidence 34668999999888 777777899999999999998 666553
No 67
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=72.62 E-value=12 Score=23.65 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=38.3
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
+.++.+.+...... ..+..++.+.+| ++++-..+..|++|...|.+.+..+.+.
T Consensus 20 ~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 20 KMAVDKVITIADAG-PTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp TTEEEEEEECTTCT-TCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEEEEcCCCC-CCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 44555555543211 147889998777 6677667889999999999998888764
No 68
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=72.60 E-value=6.1 Score=26.74 Aligned_cols=46 Identities=15% Similarity=0.255 Sum_probs=33.7
Q ss_pred eeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceee
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeV 57 (71)
..+.|+.|. ..|++++++-+| +=++-..+.+||+|...+.+.++.+
T Consensus 261 ~~~~~~~~~---~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~ 308 (357)
T 4g56_B 261 SAQTSAVHS---QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL 308 (357)
T ss_dssp GCEEECCCS---SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EeEEEeccc---eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC
Confidence 334555443 579999998665 3456778999999999998887654
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=72.20 E-value=6.8 Score=25.10 Aligned_cols=51 Identities=12% Similarity=0.212 Sum_probs=37.8
Q ss_pred eeeEEEeeecC------CCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 8 NFQKSFDAHPR------RESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 8 ~ve~~f~v~~d------~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
+....|..|.. ....|.+++++.+|-+++.- .+..|++|...+.+.+..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh
Confidence 34455666654 23589999999888666654 48899999999998887765
No 70
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=72.05 E-value=8.7 Score=25.46 Aligned_cols=36 Identities=19% Similarity=0.407 Sum_probs=31.7
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCccccce
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~Lq 55 (71)
+..|.+++.+-+|-+++...+..+|+|...+.+.+.
T Consensus 255 ~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 255 GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCS
T ss_pred CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCc
Confidence 356999999999999999999999999998877655
No 71
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=71.72 E-value=19 Score=24.89 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=48.4
Q ss_pred CcceeeeEEEeeecCC--CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRR--ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~--~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|+++.+..++..+. -..+..|.+.+.-+|++...+..|....+.|.+-+..|++..
T Consensus 133 ~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g 192 (266)
T 2iwa_A 133 PHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLPN 192 (266)
T ss_dssp TTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECHH
T ss_pred CCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECCC
Confidence 5788899999998652 234678888866699999999999999999999999999863
No 72
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=71.17 E-value=7 Score=24.73 Aligned_cols=39 Identities=10% Similarity=0.033 Sum_probs=32.4
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceee
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeV 57 (71)
.+..|.+++++.+|-.++...+..+++|...+.+....+
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~ 88 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPV 88 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCS
T ss_pred CCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeee
Confidence 457899999999999999888999999999887644333
No 73
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=70.63 E-value=15 Score=23.61 Aligned_cols=48 Identities=13% Similarity=0.380 Sum_probs=35.1
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
.++..+.-|. ..|++++++.+|=+++.- .+..+++|...+.+..+.+.
T Consensus 14 ~~~~~~~gh~---~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~ 62 (312)
T 4ery_A 14 ALKFTLAGHT---KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 62 (312)
T ss_dssp EEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred eeEEEEcccC---CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc
Confidence 3444454443 579999999999887664 58999999998877666543
No 74
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=70.32 E-value=15 Score=25.23 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=34.7
Q ss_pred CCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeeecchhh
Q psy2157 19 RESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDIEPYV 63 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVnIap~V 63 (71)
....|.+++++ +|-++ +-..+.+|++|...+.+.++.++....+
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~ 284 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLI 284 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHH
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhh
Confidence 34789999999 66555 4556999999999999999998865433
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=70.31 E-value=14 Score=27.11 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=39.1
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecCccccceeee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..+.|+.| ..+|++++++-+|-+++... +..+++|...+.+.++.+.
T Consensus 44 ~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 44 TQVEVRSIQVT---ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp TTEEEEEEECC---SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEecC---CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 34445556644 46799999999998888775 7899999999998887765
No 76
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=69.91 E-value=20 Score=23.47 Aligned_cols=39 Identities=28% Similarity=0.394 Sum_probs=31.7
Q ss_pred CCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeee
Q psy2157 20 ESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVn 58 (71)
...|.+++.+.+|-.+ +-..+.++|+|...+.+.++.+.
T Consensus 65 ~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~ 104 (319)
T 3frx_A 65 SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV 104 (319)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc
Confidence 4579999999988776 45569999999999988777653
No 77
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=69.29 E-value=11 Score=25.24 Aligned_cols=38 Identities=8% Similarity=0.230 Sum_probs=34.1
Q ss_pred CceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 21 SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
..+..|+..|.-+|++-..+..|..+.+.|.+.+..|.
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC
Confidence 44678999999999999999999999999999988874
No 78
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=69.07 E-value=7.2 Score=24.99 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=31.9
Q ss_pred EEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccc
Q psy2157 12 SFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQ 52 (71)
Q Consensus 12 ~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e 52 (71)
.+++.+.....|.+++++-+|-.++.. .+..|++|...+.+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~ 44 (342)
T 1yfq_A 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA 44 (342)
T ss_dssp EEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT
T ss_pred ceecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC
Confidence 455656667889999999877666554 58999999988877
No 79
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=68.52 E-value=14 Score=24.73 Aligned_cols=51 Identities=10% Similarity=0.174 Sum_probs=35.5
Q ss_pred eeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 7 MNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 7 l~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
.+....+. ..+..|.+++++.+| +.++-..+..|++|...+.+.+..+...
T Consensus 201 ~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 201 LAYKATVD---LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp CCEEEEEE---CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred ceEEEEEc---CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 33444444 344679999999877 4445446889999999998887766543
No 80
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=68.52 E-value=2.2 Score=31.29 Aligned_cols=20 Identities=15% Similarity=0.351 Sum_probs=15.9
Q ss_pred EEecCCeEeEEecCccccce
Q psy2157 36 SIRLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 36 S~~~~s~lrLfHa~T~e~Lq 55 (71)
.++.|.+|||||.+|-+.|-
T Consensus 10 ~v~~GdvIRL~H~~t~~~Lh 29 (381)
T 1n4k_A 10 ILKGGDVVRLFHAEQEKFLT 29 (381)
T ss_dssp ---CCCEEEEEETTTTEEEE
T ss_pred cccCCcEEEEEEcccCCeee
Confidence 36789999999999999886
No 81
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=68.27 E-value=13 Score=24.69 Aligned_cols=48 Identities=19% Similarity=0.279 Sum_probs=36.0
Q ss_pred eeEEEeeecCCCCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccceeeec
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~LqeVnI 59 (71)
..+.|..| ...|.+++++-+|-.+.. ..+.++++|...+.+.++.+..
T Consensus 173 ~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 221 (420)
T 3vl1_A 173 NPRTLIGH---RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNR 221 (420)
T ss_dssp CCEEEECC---SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECB
T ss_pred CceEEcCC---CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeec
Confidence 33455443 467999999987766554 4589999999999998888764
No 82
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=67.91 E-value=18 Score=23.05 Aligned_cols=43 Identities=16% Similarity=0.358 Sum_probs=33.8
Q ss_pred CCCceeEEEE--eCCeEEEE-EecCCeEeEEecCccccceeeecch
Q psy2157 19 RESQVRQMTW--AGDGVWVS-IRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 19 ~~~~V~~Ma~--~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
....|.++++ ..+|-.+. -..+..+++|...+.+.++.++...
T Consensus 126 ~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 126 HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 3468999998 77776544 4568999999999999998887543
No 83
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=67.87 E-value=14 Score=25.52 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=42.4
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
++|+++.++|....+. --++..|.=+|+|= .++.|+.+.++|++.+..|.+.
T Consensus 92 ~~tl~~~~ti~~~~~G----wglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 92 LATLTPRARFRYPGEG----WALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp TTTTEEEEEEECSSCC----CEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred CCcCcEEEEEeCCCCc----eEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEc
Confidence 4678888999886432 45667788899995 5999999999999999999885
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=67.49 E-value=7.7 Score=25.35 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=31.7
Q ss_pred eeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 23 VRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 23 V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
|.++++..+|.-++...+..+++|...+.+.+..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 244 (425)
T 1r5m_A 209 GVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI 244 (425)
T ss_dssp BSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC
T ss_pred eeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec
Confidence 889999999999999999999999999988776653
No 85
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=67.27 E-value=9.7 Score=28.03 Aligned_cols=40 Identities=8% Similarity=0.417 Sum_probs=35.7
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeec
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
+..|..++.+-+|-+++...+..+|+|..++.+.++++..
T Consensus 602 ~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 641 (694)
T 3dm0_A 602 NSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKV 641 (694)
T ss_dssp SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECC
T ss_pred CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhcc
Confidence 4679999999999999999999999999999988887654
No 86
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=67.18 E-value=17 Score=22.67 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=33.0
Q ss_pred CCCCceeEEEEeCC--eEEEEE-ecCCeEeEEecCccccceeeec
Q psy2157 18 RRESQVRQMTWAGD--GVWVSI-RLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 18 d~~~~V~~Ma~~g~--GVWiS~-~~~s~lrLfHa~T~e~LqeVnI 59 (71)
.....|.++++.-+ |-.+.. ..+..+++|...+.+.++.+.+
T Consensus 108 ~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 108 DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 34578999999977 665554 5689999999999998877664
No 87
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=66.48 E-value=22 Score=22.61 Aligned_cols=52 Identities=10% Similarity=0.144 Sum_probs=32.3
Q ss_pred CCCCccee-eeEEEeeecCCCCceeEEEEeCCe-EEEEEe----cCCeEeEEecCccccce
Q psy2157 1 MDWLDPMN-FQKSFDAHPRRESQVRQMTWAGDG-VWVSIR----LDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 1 ~~~~~tl~-ve~~f~v~~d~~~~V~~Ma~~g~G-VWiS~~----~~s~lrLfHa~T~e~Lq 55 (71)
||-.+.-+ +++.+..| ...|.+++++.+| -.++.. .+..+++|...+.+...
T Consensus 1 m~~~~~~~~~~~~~~~h---~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~ 58 (357)
T 3i2n_A 1 MSAFEKPQIIAHIQKGF---NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL 58 (357)
T ss_dssp ----CCCCEEEEEEEEC---SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE
T ss_pred CCccChhHHhhhhccCC---CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc
Confidence 44344433 34444444 3579999999988 455444 27899999998876543
No 88
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=66.48 E-value=16 Score=24.78 Aligned_cols=40 Identities=15% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
....|.+++.+-+|-+++.-.+.++++|...+.+.+..+.
T Consensus 63 h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~ 102 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLS 102 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEec
Confidence 4578999999999999998888899999999888766553
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=66.18 E-value=14 Score=24.13 Aligned_cols=36 Identities=11% Similarity=0.128 Sum_probs=28.5
Q ss_pred CCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCcccc
Q psy2157 18 RRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQH 53 (71)
Q Consensus 18 d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~ 53 (71)
.....|.+++++-+|-+++.- .+.+||+|...+.+.
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 445779999999888766654 588999999999887
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=66.02 E-value=16 Score=24.59 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=27.2
Q ss_pred CCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceee
Q psy2157 19 RESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeV 57 (71)
....|.+++++-+|-+++.- .+..|++|...+.+.++..
T Consensus 348 h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 348 HDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 34689999999999887765 4899999999999887653
No 91
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=65.12 E-value=18 Score=24.56 Aligned_cols=50 Identities=22% Similarity=0.262 Sum_probs=35.3
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeeecc
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
+....|..| ...|.++++.-+|-.+ +-..+.++|+|...+.+....+...
T Consensus 156 ~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 156 KIVMILQGH---EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp EEEEEECCC---SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred cEEEEEccC---CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC
Confidence 334445444 3579999998777555 4456999999999998877666543
No 92
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=64.98 E-value=3.2 Score=28.01 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=32.2
Q ss_pred CceeEEEEeCC--eEEEE-------------EecCCeEeEEecCccccceeeecchhhH
Q psy2157 21 SQVRQMTWAGD--GVWVS-------------IRLDSTLRMYNAHTYQHLQDVDIEPYVS 64 (71)
Q Consensus 21 ~~V~~Ma~~g~--GVWiS-------------~~~~s~lrLfHa~T~e~LqeVnIap~V~ 64 (71)
.+|++--..++ ..|+- ++.+..|||+|..|..-|--=++++|++
T Consensus 49 QqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H~~T~~~LhSH~~~~P~s 107 (199)
T 3mal_A 49 QSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPIS 107 (199)
T ss_dssp EEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEETTTCCEEEEEEEECTTT
T ss_pred EEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEECCCCCCEeECCcCCCCC
Confidence 45776543333 57875 3469999999999999998777777664
No 93
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=64.92 E-value=7.8 Score=26.36 Aligned_cols=42 Identities=7% Similarity=0.196 Sum_probs=32.9
Q ss_pred CCCCceeEEEEeCCeEEEEEec---CCeEeEEecCccccceeeec
Q psy2157 18 RRESQVRQMTWAGDGVWVSIRL---DSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 18 d~~~~V~~Ma~~g~GVWiS~~~---~s~lrLfHa~T~e~LqeVnI 59 (71)
+.+..|+.++.+-+|=++++-. +.++|+|...|.+.+.+++-
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~ 175 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET 175 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC
Confidence 3445588899999998876643 68999999999998877653
No 94
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=64.48 E-value=20 Score=23.72 Aligned_cols=48 Identities=13% Similarity=0.301 Sum_probs=34.3
Q ss_pred eeeeEEEeeecCCCCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccceee
Q psy2157 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 7 l~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~LqeV 57 (71)
.+..+.|+.| ..+|++++++-+|-.++. ..+.++|+|...+.+.+..+
T Consensus 196 ~~~~~~~~~h---~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 196 GKLLHTLEGH---AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL 244 (321)
T ss_dssp TEEEEEECCC---SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred CcEEEEEccc---CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE
Confidence 3444455544 357999999988876655 45899999999888766543
No 95
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=64.44 E-value=17 Score=24.25 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=32.0
Q ss_pred ceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 22 QVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 22 ~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
.+.+++++.+| ++++-..+..+++|...+.+.++.+...
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~ 344 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVF 344 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCC
Confidence 67888888666 7888788999999999999888776543
No 96
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=64.24 E-value=20 Score=24.57 Aligned_cols=46 Identities=20% Similarity=0.385 Sum_probs=34.4
Q ss_pred eEEEeeecCCCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeee
Q psy2157 10 QKSFDAHPRRESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 10 e~~f~v~~d~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVn 58 (71)
...|..| ...|++++...+|-++ +-..+.+||+|...+.+.++.++
T Consensus 331 ~~~~~~h---~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~ 377 (410)
T 1vyh_C 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 377 (410)
T ss_dssp EEEEECC---SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred EEEEECC---CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 3445444 3579999998877665 44568999999999999887765
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=64.11 E-value=17 Score=24.37 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=32.6
Q ss_pred CCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceee
Q psy2157 20 ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 20 ~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeV 57 (71)
...|.++++.-+| +-++-..+.++++|...+.+.+..+
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 170 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTL 170 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEE
Confidence 3679999999887 6777788999999999998888776
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=64.03 E-value=3.2 Score=27.37 Aligned_cols=43 Identities=5% Similarity=0.061 Sum_probs=33.3
Q ss_pred eeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCcc--cccee
Q psy2157 14 DAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTY--QHLQD 56 (71)
Q Consensus 14 ~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~--e~Lqe 56 (71)
++++-...+|++++++-+|-.++.- .+..+++|...+. +.++.
T Consensus 5 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~ 50 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHART 50 (377)
T ss_dssp EEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCC
T ss_pred eeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEE
Confidence 4445455689999999999888877 6899999999886 44443
No 99
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=63.97 E-value=18 Score=25.58 Aligned_cols=53 Identities=8% Similarity=-0.001 Sum_probs=42.2
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|+++.++|.+.++. --++..|.=+|+|= .++.|+.+.++|++.+..|.+..
T Consensus 123 ~~Tl~~~~ti~~~~eG----wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 123 GMPPQRERTTRYSGEG----WGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp TTTTEEEEEEECSSCC----CCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEE
T ss_pred CCcCcEEEEEeCCCce----eEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC
Confidence 4688889999985432 35567788888885 69999999999999999998743
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=63.78 E-value=18 Score=24.72 Aligned_cols=47 Identities=13% Similarity=0.195 Sum_probs=33.3
Q ss_pred EEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 11 KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 11 ~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
..+..+.+....|.+++..|. .=++-..+.+|++|...+.+.+..+.
T Consensus 124 ~~~~~~~~~~~~v~~~~~d~~-~l~~g~~dg~i~iwd~~~~~~~~~~~ 170 (435)
T 1p22_A 124 QRIHCRSETSKGVYCLQYDDQ-KIVSGLRDNTIKIWDKNTLECKRILT 170 (435)
T ss_dssp CCEECCCSSCCCEEEEECCSS-EEEEEESSSCEEEEESSSCCEEEEEC
T ss_pred eEEecccCCCCcEEEEEECCC-EEEEEeCCCeEEEEeCCCCeEEEEEc
Confidence 346667777788988887543 33444568899999999888776654
No 101
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=63.58 E-value=29 Score=22.92 Aligned_cols=41 Identities=10% Similarity=0.163 Sum_probs=32.1
Q ss_pred CCCCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceeee
Q psy2157 18 RRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 18 d~~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVn 58 (71)
.....|.+++++-+|-.++ -..+.++++|...+.+.++.+.
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 178 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI 178 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc
Confidence 4457899999998775554 4558999999999988877664
No 102
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=63.22 E-value=21 Score=23.67 Aligned_cols=38 Identities=16% Similarity=0.249 Sum_probs=30.0
Q ss_pred CCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceee
Q psy2157 20 ESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeV 57 (71)
...|.+++++-+|-.+ +-..+.++|+|...+.++++.+
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 3579999998777554 4556899999999998887765
No 103
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=62.92 E-value=29 Score=26.08 Aligned_cols=52 Identities=6% Similarity=0.004 Sum_probs=40.4
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeC----Ce--EEEEEecCCeEeEEecCccccceeeecc
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAG----DG--VWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g----~G--VWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
+++++...+.+. ...++++.+- +| ++++-..++++.+|.+.|++.++.|.+.
T Consensus 228 ~t~~~v~~i~~G----~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~ 285 (567)
T 1qks_A 228 KEPTTVAEIKIG----SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTR 285 (567)
T ss_dssp SSCCEEEEEECC----SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECC
T ss_pred CCCcEeEEEecC----CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecc
Confidence 466777666654 3468899882 55 7777777999999999999999999874
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=62.58 E-value=23 Score=22.97 Aligned_cols=41 Identities=7% Similarity=0.145 Sum_probs=31.7
Q ss_pred CCCCceeEEEEeC-CeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 18 RRESQVRQMTWAG-DGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 18 d~~~~V~~Ma~~g-~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
.....|.+++++. +|-.++.- .+..+++|...+.+......
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 83 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYT 83 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEE
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEe
Confidence 3457899999997 77666554 58999999999887766554
No 105
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=62.56 E-value=15 Score=25.64 Aligned_cols=47 Identities=26% Similarity=0.399 Sum_probs=34.1
Q ss_pred eeeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceee
Q psy2157 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 7 l~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeV 57 (71)
-+..+.|+.|. ..|++++.+-+|-+++.- .+.+||+|.. +.+.++.+
T Consensus 498 ~~~~~~~~~h~---~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 498 GQLLQTLTGHS---SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL 545 (577)
T ss_dssp SCEEEEEECCS---SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred CCEEEEEeCCC---CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEE
Confidence 34455666554 569999999999887654 5889999995 56666654
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=62.43 E-value=13 Score=24.98 Aligned_cols=40 Identities=10% Similarity=0.171 Sum_probs=31.8
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
....|.+++..+...=++-..+..||+|...+.+.++.+.
T Consensus 328 ~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 328 SLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp SGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred cCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 4467999999944455666679999999999999888765
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=61.92 E-value=5.3 Score=27.53 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=32.0
Q ss_pred cCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceee
Q psy2157 17 PRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 17 ~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeV 57 (71)
......|++++++-+|-++..- .+.+||+|...+.+.+..+
T Consensus 293 ~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 293 LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred eeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 3445689999998888777654 5899999999998877655
No 108
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=61.87 E-value=19 Score=23.71 Aligned_cols=44 Identities=5% Similarity=0.084 Sum_probs=31.8
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCc
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 50 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T 50 (71)
+.+..+.|..+. ....+.+++++-+|-+++.-.+..|++|..++
T Consensus 339 ~~~~~~~l~~~~-~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 339 SGGLVHQLRDPN-AAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp TCCEEEEECBTT-BCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred CCceeeeecCCC-CCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 334445555443 24678888999999898888899999998765
No 109
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=60.38 E-value=12 Score=24.11 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=32.4
Q ss_pred EEEeeecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecC--ccccceee
Q psy2157 11 KSFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAH--TYQHLQDV 57 (71)
Q Consensus 11 ~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~--T~e~LqeV 57 (71)
+.++.|. ..|++++++-+|-+++.-. +..+++|... +.+.++.+
T Consensus 5 ~~~~~h~---~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 51 (379)
T 3jrp_A 5 VIANAHN---ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL 51 (379)
T ss_dssp CCEEECC---CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EEecCCc---ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe
Confidence 3455554 5799999999998888774 8899999987 55554443
No 110
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=59.92 E-value=34 Score=22.43 Aligned_cols=38 Identities=11% Similarity=0.239 Sum_probs=29.0
Q ss_pred CCceeEEEEeCCe--EEEEEecCC---eEeEEecCcc-ccceee
Q psy2157 20 ESQVRQMTWAGDG--VWVSIRLDS---TLRMYNAHTY-QHLQDV 57 (71)
Q Consensus 20 ~~~V~~Ma~~g~G--VWiS~~~~s---~lrLfHa~T~-e~LqeV 57 (71)
...|.+++++-+| +-++-..+. .|++|...+. ++++.+
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~ 257 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL 257 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe
Confidence 5789999999887 566666676 9999999886 444443
No 111
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=59.87 E-value=19 Score=25.64 Aligned_cols=35 Identities=14% Similarity=0.393 Sum_probs=25.8
Q ss_pred EEEeeecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecCc
Q psy2157 11 KSFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHT 50 (71)
Q Consensus 11 ~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T 50 (71)
+.|++...+ .-++.+|.| ||++.. +..+++|-.+-
T Consensus 323 ~~~~~~~~~----~di~i~glg-wi~v~~~~~~~~~~~p~~ 358 (368)
T 3h2y_A 323 YEFNIREPK----TDVVFSGLG-WVTVNEPGAKIVAHVPKG 358 (368)
T ss_dssp EEEECCSSS----EEEEETTTE-EEEECSSCCEEEEEEETT
T ss_pred EEEEecCCc----ceEEEcccc-eEEEecCceEEEEEecCC
Confidence 456665421 788999999 999987 78888876543
No 112
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=59.72 E-value=29 Score=23.46 Aligned_cols=39 Identities=8% Similarity=0.235 Sum_probs=31.4
Q ss_pred CCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceeee
Q psy2157 20 ESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVn 58 (71)
...|.++++..+|-++. -..+.+|++|...+.+.++.+.
T Consensus 310 ~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~ 349 (464)
T 3v7d_B 310 TDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ 349 (464)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence 46799999988775554 4568999999999999888765
No 113
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=59.66 E-value=27 Score=21.24 Aligned_cols=35 Identities=11% Similarity=0.172 Sum_probs=30.6
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCc-cccc
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHL 54 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T-~e~L 54 (71)
...|.+++++-+|-++++..+..|++|...+ .+..
T Consensus 41 ~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPE 76 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCE
T ss_pred CcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCce
Confidence 4679999999999999999999999999998 5544
No 114
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=58.09 E-value=38 Score=22.42 Aligned_cols=41 Identities=12% Similarity=0.226 Sum_probs=27.4
Q ss_pred CCCCceeEEEEeCCe--EEEEEecCCeEeEEecCccccceeee
Q psy2157 18 RRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 18 d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
.....|.++++.-+| .=+|-..+.++|+|...+.+.+...+
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--------
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccccc
Confidence 345679999998664 66778889999999999998876543
No 115
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=56.85 E-value=39 Score=22.20 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=30.6
Q ss_pred CCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceee
Q psy2157 19 RESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeV 57 (71)
....|.+++.+.+|-.+ +-..+.++|+|...+.+.++.+
T Consensus 75 h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 114 (343)
T 2xzm_R 75 HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRF 114 (343)
T ss_dssp CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 34579999998888664 5566999999999998876654
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=56.43 E-value=42 Score=22.79 Aligned_cols=49 Identities=16% Similarity=0.325 Sum_probs=35.1
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..+.|..|. ..|.+++..| ..-++-..+.++++|...+.+.++.+.
T Consensus 285 ~~~~~~~~~~~~---~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~ 333 (435)
T 1p22_A 285 TCEFVRTLNGHK---RGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLE 333 (435)
T ss_dssp TCCEEEEEECCS---SCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cCcEEEEEcCCC---CcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEEe
Confidence 344455565443 5688888865 455566678999999999998887765
No 117
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=56.25 E-value=14 Score=27.13 Aligned_cols=48 Identities=13% Similarity=0.254 Sum_probs=35.9
Q ss_pred eeEEEeeecCCCCceeEEEEeCCeEEEEE-ecCCeEeEEecCccccceeeec
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDGVWVSI-RLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~-~~~s~lrLfHa~T~e~LqeVnI 59 (71)
....+..| ...|++++++-+|-.++. ..+.++|+|...+.+.+..+.-
T Consensus 553 ~~~~~~~h---~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~ 601 (694)
T 3dm0_A 553 LRSTLAGH---TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 601 (694)
T ss_dssp EEEEECCC---SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC
T ss_pred EEEEEcCC---CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC
Confidence 33444444 357999999988877654 5699999999999988876654
No 118
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=56.08 E-value=36 Score=21.53 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=30.8
Q ss_pred CceeEEEEeCCe-EEEEEecCCeEeEEecCccccceeeec
Q psy2157 21 SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 21 ~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
..+..|+...+| +|++-..+..|..|...|.+.+..+..
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 457788877654 999998889999999988877776654
No 119
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=55.70 E-value=41 Score=22.12 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=31.0
Q ss_pred CceeEEEEeCCeEEEEEecCCeEeEEecCccccceee
Q psy2157 21 SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeV 57 (71)
..|.+++...+|.-++-..+.++++|...+.+.+..+
T Consensus 144 ~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~ 180 (340)
T 1got_B 144 GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF 180 (340)
T ss_dssp SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE
Confidence 5688898888888888888999999999988766554
No 120
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=55.62 E-value=42 Score=22.26 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=31.2
Q ss_pred CCCCceeEEEEeCCeEEEEEecCCeEeEEecC-ccccceee
Q psy2157 18 RRESQVRQMTWAGDGVWVSIRLDSTLRMYNAH-TYQHLQDV 57 (71)
Q Consensus 18 d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~-T~e~LqeV 57 (71)
.....|.+++++-+|-+++.-.+.++++|... +.+.++-+
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~ 215 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIV 215 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEE
T ss_pred CCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeee
Confidence 34578999999999888877789999999998 44444433
No 121
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=54.77 E-value=31 Score=22.59 Aligned_cols=40 Identities=18% Similarity=0.373 Sum_probs=30.6
Q ss_pred CCCceeEEEEeC-CeEE-EEEecCCeEeEEecCccccceeee
Q psy2157 19 RESQVRQMTWAG-DGVW-VSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 19 ~~~~V~~Ma~~g-~GVW-iS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
....|.+++++- +|-. ++-..+..+++|...+.+.+..+.
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 346799999875 5544 445568999999999998887765
No 122
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=54.61 E-value=36 Score=24.73 Aligned_cols=47 Identities=21% Similarity=0.333 Sum_probs=33.9
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceee
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeV 57 (71)
+..+.|.-| ...|.+++.+.+|-.++ -..+.++|+|...+.+.+..+
T Consensus 181 ~~~~~l~~H---~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 181 KFKSTFGEH---TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp EEEEEECCC---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred eEeeeeccc---cCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 334455444 35799999999887654 556999999998887765544
No 123
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=54.45 E-value=29 Score=27.22 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=29.8
Q ss_pred CceeEEEEeCCeEEEEEe-cCCeEeEEecCcccccee
Q psy2157 21 SQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQD 56 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~Lqe 56 (71)
..|.+++++-+|-+++-- .+.+||+|...+.+.++.
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 579999999988776654 589999999999887653
No 124
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=54.41 E-value=38 Score=23.60 Aligned_cols=53 Identities=17% Similarity=0.127 Sum_probs=39.4
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEe-cCCeEeEEecCcccccee-eecc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQHLQD-VDIE 60 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~-~~s~lrLfHa~T~e~Lqe-VnIa 60 (71)
++|.++.+.+.+.. ...+|+.+.+| .+.+.. .+..|..|.+.|.+.+.. +.+-
T Consensus 305 ~~t~~vv~~i~~g~----~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG 361 (373)
T 2mad_H 305 GLVGQTSSQISLGH----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG 361 (373)
T ss_pred CCCCEEEEEEECCC----CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCC
Confidence 34566666665543 57889999887 577766 489999999999999988 4543
No 125
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=54.37 E-value=22 Score=23.94 Aligned_cols=41 Identities=24% Similarity=0.308 Sum_probs=32.0
Q ss_pred CCceeEEEEeCCeEEEE-EecCCeEeEEecCccccceeeecc
Q psy2157 20 ESQVRQMTWAGDGVWVS-IRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS-~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
...|.+++++-+|-.++ -..+.++|+|...+.+.++..+..
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 45799999988876554 456999999999998887766543
No 126
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=54.25 E-value=36 Score=23.11 Aligned_cols=48 Identities=19% Similarity=0.237 Sum_probs=31.4
Q ss_pred eeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 7 MNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 7 l~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
.+..+.|..| ...|.+++..|. .=++-..+.++++|...+.+.++.+.
T Consensus 149 ~~~~~~~~~h---~~~v~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 149 GKCLRTLVGH---TGGVWSSQMRDN-IIISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp CCEEEECCCC---SSCEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CcEEEEEcCC---CCCEEEEEecCC-EEEEEeCCCeEEEEECCcCcEEEEEC
Confidence 3344444433 356888888754 44555678888888888887776654
No 127
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=53.36 E-value=52 Score=22.63 Aligned_cols=55 Identities=9% Similarity=0.147 Sum_probs=42.1
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
++|.++.+.+.+... .-..-++..|.-+|++-..+..+-.|.+.|++.+..|...
T Consensus 51 ~~tg~v~~~i~l~~~--~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g 105 (266)
T 2iwa_A 51 LQTGKVENIHKMDDS--YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ 105 (266)
T ss_dssp TTTCCEEEEEECCTT--CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC
T ss_pred CCCCCEEEEEecCCC--cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC
Confidence 356677777665432 2223577778899999999999999999999999998765
No 128
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=53.12 E-value=22 Score=26.73 Aligned_cols=41 Identities=22% Similarity=0.356 Sum_probs=33.7
Q ss_pred CCCCceeEEEEe--CCeEEEEEec----CCeEeEEecCccccceeee
Q psy2157 18 RRESQVRQMTWA--GDGVWVSIRL----DSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 18 d~~~~V~~Ma~~--g~GVWiS~~~----~s~lrLfHa~T~e~LqeVn 58 (71)
+.+..+.|+... |.-||+|..+ ++.|-.|.+.|++.+..|.
T Consensus 500 ~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 500 EGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp SSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 346788999987 5559999874 7899999999999888876
No 129
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=51.95 E-value=39 Score=22.42 Aligned_cols=39 Identities=5% Similarity=0.281 Sum_probs=33.3
Q ss_pred ceeEEEEeCCeEEEEEecCCeEeEEecCc-cccceeeecc
Q psy2157 22 QVRQMTWAGDGVWVSIRLDSTLRMYNAHT-YQHLQDVDIE 60 (71)
Q Consensus 22 ~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T-~e~LqeVnIa 60 (71)
.|.+++++-+|-+++...+..+++|...+ .+.++.+...
T Consensus 287 ~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp CEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESC
T ss_pred eEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecc
Confidence 89999999999888887779999999997 7777776543
No 130
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=51.71 E-value=31 Score=24.50 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=25.5
Q ss_pred EEEeeecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecCc
Q psy2157 11 KSFDAHPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHT 50 (71)
Q Consensus 11 ~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T 50 (71)
+.|.+... -.-++.+|.| ||++.. +..+++|-.+-
T Consensus 324 ~~~~~~~~----~~di~i~glg-wi~v~~~~~~~~~~~p~~ 359 (369)
T 3ec1_A 324 RSLSVKER----KTDIVFSGLG-WVTCNDPGAQLVVHAPKG 359 (369)
T ss_dssp EEEECCSS----SEEEEETTTE-EEEESSSCCEEEEEEETT
T ss_pred EEEEeCCC----ceeEEEccCc-eEEeeCCceEEEEEeCCC
Confidence 34655432 2678999999 999987 78888876543
No 131
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=51.20 E-value=42 Score=26.15 Aligned_cols=48 Identities=17% Similarity=0.314 Sum_probs=36.2
Q ss_pred eeeEEEeeecCCCCceeEEEEeCCeEEEEEe-cCCeEeEEecCccccceeee
Q psy2157 8 NFQKSFDAHPRRESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 8 ~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T~e~LqeVn 58 (71)
+....+..| ...|.+++++.+|-+++.- .+.++++|...|.+.+..+.
T Consensus 648 ~~~~~~~~h---~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 648 EKLLDIKAH---EDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp CEEEEECCC---SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEeccC---CCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 334455433 4679999999998777655 58999999999998887664
No 132
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=50.67 E-value=28 Score=23.76 Aligned_cols=55 Identities=13% Similarity=0.268 Sum_probs=40.1
Q ss_pred cceeeeEEEeeecC---CCCceeEEEEeCCeEEEEEe--c-CCeEeEEecCcccccee-eec
Q psy2157 5 DPMNFQKSFDAHPR---RESQVRQMTWAGDGVWVSIR--L-DSTLRMYNAHTYQHLQD-VDI 59 (71)
Q Consensus 5 ~tl~ve~~f~v~~d---~~~~V~~Ma~~g~GVWiS~~--~-~s~lrLfHa~T~e~Lqe-VnI 59 (71)
.++++.+.+.+.+. .+..+..|+.+-+|=|+-.. . +.++.+|.+.|.+.+.+ |.+
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~ 150 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA 150 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC
Confidence 46667777776543 23567889998788555554 3 67999999999999888 665
No 133
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=50.61 E-value=61 Score=22.60 Aligned_cols=56 Identities=5% Similarity=-0.003 Sum_probs=40.8
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|.++.+.....++ ---.-++..|+-+|++--.+..+..|.+.|++.+.++...+
T Consensus 72 ~~Tgkv~~~~~l~~~--~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~ 127 (262)
T 3nol_A 72 IESGKTLQQIELGKR--YFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG 127 (262)
T ss_dssp TTTCCEEEEEECCTT--CCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCcEEEEEecCCc--cceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC
Confidence 356667766655322 11233677789999998889999999999999999988643
No 134
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=49.73 E-value=20 Score=24.60 Aligned_cols=38 Identities=8% Similarity=0.105 Sum_probs=30.8
Q ss_pred CceeEEEEeCCeEEEEEecCCeEeEEecCccc---cceeee
Q psy2157 21 SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ---HLQDVD 58 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e---~LqeVn 58 (71)
.++.+++.+.+|=.++...+..|++|...|.+ .+....
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~ 45 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWS 45 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEE
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecC
Confidence 46788888888888888889999999999998 554443
No 135
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=49.44 E-value=44 Score=26.18 Aligned_cols=35 Identities=11% Similarity=0.210 Sum_probs=29.0
Q ss_pred CCCceeEEEEeCCeEEEEEec-CCeEeEEecCccccc
Q psy2157 19 RESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHL 54 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e~L 54 (71)
....|..++.+-+| .++.-. +.++|||...+.+.+
T Consensus 574 h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~ 609 (902)
T 2oaj_A 574 NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII 609 (902)
T ss_dssp CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE
T ss_pred CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE
Confidence 44679999999999 887765 889999999886554
No 136
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=48.87 E-value=54 Score=21.49 Aligned_cols=42 Identities=10% Similarity=0.231 Sum_probs=30.9
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecCCeEeEEecCc
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHT 50 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T 50 (71)
.+++..+.|+.|.+ .|.+++.+++ .=++-..+.++|+|...+
T Consensus 2 ~~~~~~~~~~~h~~---~v~~~~~s~~-~las~~~D~~i~lw~~~~ 43 (330)
T 2hes_X 2 ASINLIKSLKLYKE---KIWSFDFSQG-ILATGSTDRKIKLVSVKY 43 (330)
T ss_dssp -CCEEEEEEECCSS---CEEEEEEETT-EEEEEESSSCEEEEECSS
T ss_pred cccccceeeccCCC---ceeeeccCCC-EEEEEcCCCEEEEEEecC
Confidence 35566777877665 6999999887 444556689999998876
No 137
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=48.46 E-value=34 Score=24.83 Aligned_cols=42 Identities=24% Similarity=0.465 Sum_probs=33.7
Q ss_pred CCCceeEEEEeCCeEEE-EEecCCeEeEEecCccccceeeecc
Q psy2157 19 RESQVRQMTWAGDGVWV-SIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWi-S~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
....|..++++-+|-.+ +-..+.++|+|...+.+.++.+...
T Consensus 238 h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 34689999999888655 4566999999999999988877643
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=48.36 E-value=35 Score=21.50 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=27.7
Q ss_pred ceeEEEEeCCe--EEEEEecCCeEeEEec---Cccccceeeec
Q psy2157 22 QVRQMTWAGDG--VWVSIRLDSTLRMYNA---HTYQHLQDVDI 59 (71)
Q Consensus 22 ~V~~Ma~~g~G--VWiS~~~~s~lrLfHa---~T~e~LqeVnI 59 (71)
.+..++++.+| ++++-..+..+++|.. .+.+.++.+..
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 127 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC
Confidence 78899998877 5555556889999998 56666655543
No 139
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=48.14 E-value=54 Score=21.86 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=29.6
Q ss_pred CceeEEEEeCCeEE-EEEecCCeEeEEecCccccceeee
Q psy2157 21 SQVRQMTWAGDGVW-VSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 21 ~~V~~Ma~~g~GVW-iS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
..|.+++++.+|-. ++-..+.++|+|..++.+.++.+.
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH 193 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence 46888888887754 455679999999999998876653
No 140
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=47.94 E-value=51 Score=21.61 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=28.4
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCcc
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTY 51 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~ 51 (71)
...+|..++++..|.-++-..+.++|+|...+.
T Consensus 249 h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 249 HKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp CSSCEEEEEECTTSCEEEEETTSCEEEEEEETT
T ss_pred cccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC
Confidence 457899999998888888889999999997664
No 141
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=47.07 E-value=52 Score=20.82 Aligned_cols=40 Identities=5% Similarity=0.008 Sum_probs=34.2
Q ss_pred CceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeecc
Q psy2157 21 SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnIa 60 (71)
.....|+..+..+|++-..+..|+.|...|.+.+..|.+.
T Consensus 209 ~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 209 QYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp CSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred CCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 4456788889999999999999999999999999888753
No 142
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=44.69 E-value=58 Score=23.79 Aligned_cols=30 Identities=17% Similarity=0.124 Sum_probs=23.6
Q ss_pred eCCeEEEEE-ecCCeEeEEecCccccceeee
Q psy2157 29 AGDGVWVSI-RLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 29 ~g~GVWiS~-~~~s~lrLfHa~T~e~LqeVn 58 (71)
.|+|-.++= +.|.++|+|...|.+.+..+.
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEc
Confidence 455555554 679999999999999988875
No 143
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.16 E-value=67 Score=21.26 Aligned_cols=38 Identities=11% Similarity=0.338 Sum_probs=28.6
Q ss_pred CceeEEEEeCCe-EEEEEecCCeEeEEecCccccceeeec
Q psy2157 21 SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 21 ~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
..+..|+...+| +|++-..+..|..|.. +.+.+..+.+
T Consensus 230 ~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~ 268 (326)
T 2ghs_A 230 GGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV 268 (326)
T ss_dssp SEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred CCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC
Confidence 456778876555 9999988889999988 5666666654
No 144
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=43.46 E-value=66 Score=21.16 Aligned_cols=45 Identities=11% Similarity=0.160 Sum_probs=32.4
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCe-EEEEEecCCeEeEEecCc
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHT 50 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T 50 (71)
+.++...|.........+..++...+| +|++=..+..|+.|....
T Consensus 277 ~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 277 SGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 344455555444555678899998887 888888899999997654
No 145
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=42.92 E-value=63 Score=20.54 Aligned_cols=35 Identities=6% Similarity=-0.099 Sum_probs=26.8
Q ss_pred CCCCceeEEEEeCCe-EEEEEecCCeEeEEecCccc
Q psy2157 18 RRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 52 (71)
Q Consensus 18 d~~~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e 52 (71)
.....+..++...+| +|++-..+..|.+|...+.+
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 345678889987655 88888777899999986655
No 146
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=42.88 E-value=67 Score=25.02 Aligned_cols=40 Identities=20% Similarity=0.295 Sum_probs=35.1
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeee
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVn 58 (71)
....|..++.+.+|-.++...+.++++|...+.+.+..+.
T Consensus 1043 ~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1043 HQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp CSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred CCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 4467999999999999999999999999999998877654
No 147
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=42.26 E-value=83 Score=22.83 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=41.4
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCe--EEEE-EecCCeEeEEecCccccceeeecch
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVS-IRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS-~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
++|.++.+.+.+.. .+..|+.+-+| .+.. -..+..+..|.+.|++.+..|+.-.
T Consensus 318 ~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 318 AKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp TTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred CCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 46778888888875 46678887777 3444 4558999999999999999987643
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=42.06 E-value=63 Score=20.30 Aligned_cols=39 Identities=10% Similarity=0.129 Sum_probs=28.3
Q ss_pred CCceeEEEEeCCe--EEEEEecCCeEeEEecC----ccccceeee
Q psy2157 20 ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAH----TYQHLQDVD 58 (71)
Q Consensus 20 ~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~----T~e~LqeVn 58 (71)
...+..++++.+| ++++-..+..+++|... +.+.+..+.
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred cCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec
Confidence 3467789999777 66666678999999988 455655554
No 149
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=41.83 E-value=8.8 Score=29.57 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=12.9
Q ss_pred ecCCeEeEEecCccccce
Q psy2157 38 RLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 38 ~~~s~lrLfHa~T~e~Lq 55 (71)
+.|..|||||.+|-+.|-
T Consensus 215 ~~GDvIRL~H~~t~~~L~ 232 (559)
T 2xoa_A 215 TGGHVLRLFHGHMDECLT 232 (559)
T ss_dssp BTTCEEEEECC---CEEE
T ss_pred cCCCEEEEEecCCCceee
Confidence 479999999999988776
No 150
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=41.78 E-value=56 Score=23.88 Aligned_cols=53 Identities=11% Similarity=0.046 Sum_probs=33.9
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCeEEE-------------EEecCCeEeEEecCccccceee
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWV-------------SIRLDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWi-------------S~~~~s~lrLfHa~T~e~LqeV 57 (71)
+|.+..+.|+.|+.....|.+.+-+.+|.-+ |-+.+.++|+|...|.+.+.-.
T Consensus 211 ~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 211 KTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp TTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 4555667777655544577777777777654 2245789999999999876533
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=41.60 E-value=71 Score=20.80 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=29.4
Q ss_pred EeeecCCCCceeEEEEeCCeEEE--EEec-CCeEeEEecC----ccccceeee
Q psy2157 13 FDAHPRRESQVRQMTWAGDGVWV--SIRL-DSTLRMYNAH----TYQHLQDVD 58 (71)
Q Consensus 13 f~v~~d~~~~V~~Ma~~g~GVWi--S~~~-~s~lrLfHa~----T~e~LqeVn 58 (71)
+...+.....+..++++-+|=++ +-+. +..+++|... +++.++.+.
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec
Confidence 44444444667899999888554 4455 6799999874 333555443
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=41.39 E-value=66 Score=20.39 Aligned_cols=50 Identities=14% Similarity=0.106 Sum_probs=34.4
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCcccc-ceeee
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTYQH-LQDVD 58 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~e~-LqeVn 58 (71)
++.++...+..+ ...+ .++.+-+| ++++-..+..|++|...+.+. ...+.
T Consensus 28 ~~~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 28 DTLEILNQITLG---YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp TTCCEEEEEECC---CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred cccceeeeEEcc---CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 445555556543 3455 88887776 677777788999999999887 44443
No 153
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=41.05 E-value=47 Score=20.50 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=28.0
Q ss_pred CceeEEEEeCCe-EEEEEecCCeEeEEecCccccce
Q psy2157 21 SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 21 ~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e~Lq 55 (71)
..+..++...+| +|++-..+..|+.|....-+++.
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHH 269 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCC
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCCCccccC
Confidence 568888887544 99999999999999888777653
No 154
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=40.30 E-value=80 Score=20.99 Aligned_cols=33 Identities=3% Similarity=0.254 Sum_probs=28.7
Q ss_pred CceeEEEEeCCeEEEEEe----cCCeEeEEecCcccc
Q psy2157 21 SQVRQMTWAGDGVWVSIR----LDSTLRMYNAHTYQH 53 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~----~~s~lrLfHa~T~e~ 53 (71)
..+..++++.+|-.++.- .+..+++|...+.+.
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 468999999999998885 799999999998765
No 155
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=38.32 E-value=76 Score=20.33 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=28.4
Q ss_pred CceeEEEEeCCe-EEEEEecCCeEeEEecCccccceeeec
Q psy2157 21 SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 21 ~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
..+..|+...+| +|++-..+..|++|.. +.+.++.+..
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILI 271 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEc
Confidence 467788887655 9999988889999987 4555666543
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=38.16 E-value=72 Score=20.78 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=28.6
Q ss_pred CCCCceeEEEEeCCe--EEEEEecCCeEeEEecCcc--ccceeee
Q psy2157 18 RRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTY--QHLQDVD 58 (71)
Q Consensus 18 d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~--e~LqeVn 58 (71)
..+..+++++.+-+| ++++-..+..+++|...+. +.++.+.
T Consensus 208 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~ 252 (361)
T 3scy_A 208 APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVA 252 (361)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEE
T ss_pred CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEe
Confidence 345678999999888 4455445899999997644 3455544
No 157
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=38.13 E-value=15 Score=28.75 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=20.5
Q ss_pred EecCCeEeEEecCccccceeeecchh
Q psy2157 37 IRLDSTLRMYNAHTYQHLQDVDIEPY 62 (71)
Q Consensus 37 ~~~~s~lrLfHa~T~e~LqeVnIap~ 62 (71)
++.|.+|||+|.+|-+.|--=+++++
T Consensus 234 Vk~GDvIRL~H~~T~~~LhSH~~~~P 259 (604)
T 3uj4_A 234 LKGGDVVRLFHAEQEKFLTADEHRKK 259 (604)
T ss_dssp CBTTCEEEEEETTTTEEEEEEEETTE
T ss_pred cccCCEEEEEECCCCCCeecCCCCCC
Confidence 44689999999999998866555554
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=36.45 E-value=21 Score=26.09 Aligned_cols=50 Identities=24% Similarity=0.177 Sum_probs=36.0
Q ss_pred eeEEEeeecCCCCceeEEEEeCCeEEEEEec--CC-----eEeEEecCccccceeee
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDGVWVSIRL--DS-----TLRMYNAHTYQHLQDVD 58 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~--~s-----~lrLfHa~T~e~LqeVn 58 (71)
++.-|.-.......|+.++++-+|=++++.. +. .|++|...|.+..+-++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~ 81 (741)
T 2ecf_A 25 LEAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD 81 (741)
T ss_dssp HHHHTSSSCTTCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC
T ss_pred HHHHhccCCcCCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc
Confidence 3333333344567899999999999998875 34 89999999887655443
No 159
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=36.24 E-value=84 Score=20.10 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=28.7
Q ss_pred eeEEEeeecCCCCceeEEEEeCCe----EEEEEecCCeEeEEecCcc
Q psy2157 9 FQKSFDAHPRRESQVRQMTWAGDG----VWVSIRLDSTLRMYNAHTY 51 (71)
Q Consensus 9 ve~~f~v~~d~~~~V~~Ma~~g~G----VWiS~~~~s~lrLfHa~T~ 51 (71)
..+.|+.|. ..|+.++++-+| .=++-..+.++|+|...+.
T Consensus 196 ~~~~l~~H~---~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 196 LESTLEGHS---DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEEECCCS---SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEecCCC---CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 344555443 579999998763 5566778999999998764
No 160
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=35.91 E-value=85 Score=20.07 Aligned_cols=31 Identities=10% Similarity=0.192 Sum_probs=25.0
Q ss_pred CCceeEEEEeCCeEEEEEe-cCCeEeEEecCc
Q psy2157 20 ESQVRQMTWAGDGVWVSIR-LDSTLRMYNAHT 50 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~-~~s~lrLfHa~T 50 (71)
...|++++.+-+|=+++-- .+.++|+|..++
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~ 40 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEG 40 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEBCS
T ss_pred cCceEEEEECCCCCEEEEEeCCCEEEEEecCC
Confidence 3579999999888887665 489999998763
No 161
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=35.48 E-value=88 Score=22.71 Aligned_cols=56 Identities=5% Similarity=-0.044 Sum_probs=42.1
Q ss_pred CcceeeeEEEeeecC----CCCceeEEEEeCCeEEEEEec---CCeEeEEecCccccceeeec
Q psy2157 4 LDPMNFQKSFDAHPR----RESQVRQMTWAGDGVWVSIRL---DSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d----~~~~V~~Ma~~g~GVWiS~~~---~s~lrLfHa~T~e~LqeVnI 59 (71)
+.|+++.+.+.+... .+.....++.+.+|=|+-+.+ +..+....+.|.+.+..|++
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 356777788877542 245678899887776555443 68999999999999999986
No 162
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=34.68 E-value=54 Score=26.35 Aligned_cols=41 Identities=20% Similarity=0.344 Sum_probs=32.3
Q ss_pred CceeEEEEeCCe-EEEEEecCCeEeEEecCccccceeeecch
Q psy2157 21 SQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDIEP 61 (71)
Q Consensus 21 ~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e~LqeVnIap 61 (71)
..|..++...+. .=+++..+.+||+|...|.+++...|+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence 456667766553 44589999999999999999999998753
No 163
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=33.68 E-value=1.1e+02 Score=20.76 Aligned_cols=38 Identities=11% Similarity=0.247 Sum_probs=29.0
Q ss_pred CCceeEEEEeCCe--EEEEEecCCeEeEEecCcc-ccceee
Q psy2157 20 ESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTY-QHLQDV 57 (71)
Q Consensus 20 ~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~-e~LqeV 57 (71)
...|+++++.-.| +-++-..+.+|++|...+. +++..+
T Consensus 277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~ 317 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 317 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE
T ss_pred CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe
Confidence 4679999998766 5667778999999999874 444444
No 164
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=32.87 E-value=66 Score=22.86 Aligned_cols=52 Identities=6% Similarity=-0.024 Sum_probs=40.7
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEe---------cCCeEeEEecCccccceeeecc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIR---------LDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~---------~~s~lrLfHa~T~e~LqeVnIa 60 (71)
++|.++.+.|.+... + +++.+-+| +|++-. .+.+|..|.+.|++.+.+|.+-
T Consensus 53 ~~t~~v~~~i~vG~~---P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 53 AGCGVTLGHSLGAFL---S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp TTTTEEEEEEEECTT---C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCCeEEEEEeCCCC---C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 467888889988865 3 67776554 677653 4789999999999999999864
No 165
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.20 E-value=50 Score=19.39 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=34.0
Q ss_pred ecCCCCceeEEEEeCCeEEEEEec-CCeEeEEecCccccceee
Q psy2157 16 HPRRESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 16 ~~d~~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e~LqeV 57 (71)
.++..+++.....+|. .|.-.++ +...--|+..|-+-.+|.
T Consensus 5 ~~~~~~p~s~~pipgt-~W~~v~T~dGR~fyyN~~Tk~S~Wek 46 (73)
T 2dk7_A 5 SSGKAKPVATAPIPGT-PWCVVWTGDERVFFYNPTTRLSMWDR 46 (73)
T ss_dssp SSSSCCEEEEEECSSS-SCEEEEESSSCEEEEETTTTEECSSC
T ss_pred ccCCCCCCCCCCCCCC-CcEEEECCCCCEEEecCcccceeccC
Confidence 3566789999999987 7999886 899999999998877665
No 166
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=31.05 E-value=93 Score=22.44 Aligned_cols=48 Identities=2% Similarity=-0.074 Sum_probs=33.5
Q ss_pred ceeeeEEEeeecCCCCceeEEEEeCCeEEEEEecC----------CeEeEEecCcccc
Q psy2157 6 PMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRLD----------STLRMYNAHTYQH 53 (71)
Q Consensus 6 tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~~----------s~lrLfHa~T~e~ 53 (71)
+.+.+..++.+......|...+++-+|=++++..+ +.+++|...+.+.
T Consensus 46 ~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 46 TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred CCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 33344444433322235899999999999998864 7899999988775
No 167
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=30.73 E-value=83 Score=22.86 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=30.7
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCccccce
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~Lq 55 (71)
...+..++++-+|=++++..+..|++|...+.+..+
T Consensus 151 ~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 151 EGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQ 186 (741)
T ss_dssp SSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEE
Confidence 356899999999999999999999999988865443
No 168
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=29.44 E-value=63 Score=25.26 Aligned_cols=33 Identities=9% Similarity=0.204 Sum_probs=29.7
Q ss_pred CCceeEEEEeCCeEEEEEec-CCeEeEEecCccc
Q psy2157 20 ESQVRQMTWAGDGVWVSIRL-DSTLRMYNAHTYQ 52 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~-~s~lrLfHa~T~e 52 (71)
.++|.+++++-+|=.++.-+ +.++|+|...+.+
T Consensus 129 ~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 129 SRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp TTCEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred cccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 45799999999999999987 9999999999864
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=29.29 E-value=1.1e+02 Score=19.16 Aligned_cols=41 Identities=17% Similarity=0.271 Sum_probs=26.1
Q ss_pred eEEEeeecCCCCceeEEEEeCCe-EEEEEecCCeEeEEecCccc
Q psy2157 10 QKSFDAHPRRESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQ 52 (71)
Q Consensus 10 e~~f~v~~d~~~~V~~Ma~~g~G-VWiS~~~~s~lrLfHa~T~e 52 (71)
...|..+.. ...+..++...+| +|++ ..+..+++|......
T Consensus 241 ~~~~~~~~~-~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 241 ISALESKVK-HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEEESSC-CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred EEEEcccCC-CCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 344544332 2346778877655 8888 568899999765543
No 170
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=28.81 E-value=1.2e+02 Score=19.52 Aligned_cols=39 Identities=21% Similarity=0.328 Sum_probs=28.7
Q ss_pred CceeEEEEeCCe--EEEEEecCCeEeEEecC---ccccceeeec
Q psy2157 21 SQVRQMTWAGDG--VWVSIRLDSTLRMYNAH---TYQHLQDVDI 59 (71)
Q Consensus 21 ~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~---T~e~LqeVnI 59 (71)
..+..++.+-+| ++++-+.+..+++|... +++.++.+..
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~ 283 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST 283 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec
Confidence 568889999888 56666778999999976 4555555543
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=27.96 E-value=86 Score=23.36 Aligned_cols=32 Identities=13% Similarity=0.318 Sum_probs=27.0
Q ss_pred eeEEEEeCCeEEEEEecCCeEeEEecCccccce
Q psy2157 23 VRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 23 V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~Lq 55 (71)
....+|+.+|-.+... +..|++|+..|.+..+
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~ 50 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSV 50 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEE
Confidence 5578999999998887 8899999999887543
No 172
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=27.85 E-value=1.5e+02 Score=20.45 Aligned_cols=51 Identities=8% Similarity=0.122 Sum_probs=36.4
Q ss_pred cceeeeEEEeeecCCCCceeEEEEeCCeEEEEEec-----------CCeEeEEecCccccceeeecc
Q psy2157 5 DPMNFQKSFDAHPRRESQVRQMTWAGDGVWVSIRL-----------DSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 5 ~tl~ve~~f~v~~d~~~~V~~Ma~~g~GVWiS~~~-----------~s~lrLfHa~T~e~LqeVnIa 60 (71)
.+.++...+.+. ... +++.+-+|=++-+.+ +.++..|.+.|++.+++|.+.
T Consensus 55 ~t~~~~~~i~~g----~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~ 116 (373)
T 2mad_H 55 GSGSILGHVNGG----FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELP 116 (373)
T ss_pred CCCeEEEEecCC----CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECC
Confidence 355555555543 223 888888886665554 578999999999999998774
No 173
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=24.99 E-value=1.1e+02 Score=22.38 Aligned_cols=52 Identities=12% Similarity=0.089 Sum_probs=40.0
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEe---------cCCeEeEEecCccccceeeecc
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIR---------LDSTLRMYNAHTYQHLQDVDIE 60 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~---------~~s~lrLfHa~T~e~LqeVnIa 60 (71)
++|+++...+.+... + .++.+-+| +|++-. .+..+..+.+.|++.+.+|.+.
T Consensus 106 ~~t~~vv~~I~vG~~---P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~ 168 (426)
T 3c75_H 106 GSTGRILGMTDGGFL---P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELP 168 (426)
T ss_dssp TTTTEEEEEEEECSS---C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCCEEEEEEECCCC---C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECC
Confidence 467888888888653 3 78888887 455542 3568999999999999999874
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=24.93 E-value=65 Score=23.28 Aligned_cols=30 Identities=13% Similarity=0.150 Sum_probs=26.2
Q ss_pred eeEEEEeCCeEEEEEecCCeEeEEecCccccc
Q psy2157 23 VRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 54 (71)
Q Consensus 23 V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~L 54 (71)
|++|+. +|-|+++..++.|+.|-..++...
T Consensus 90 V~~l~f--d~~~L~v~~~~~l~v~dv~sl~~~ 119 (388)
T 1xip_A 90 VIFVCF--HGDQVLVSTRNALYSLDLEELSEF 119 (388)
T ss_dssp EEEEEE--ETTEEEEEESSEEEEEESSSTTCE
T ss_pred eeEEEE--CCCEEEEEcCCcEEEEEchhhhcc
Confidence 999999 888888889999999999887743
No 175
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=24.28 E-value=2.1e+02 Score=20.82 Aligned_cols=50 Identities=16% Similarity=0.241 Sum_probs=39.2
Q ss_pred CcceeeeEEEeeecCCCCceeEEEEeCCe--EEEEEe-cCCeEeEEecCccccceee
Q psy2157 4 LDPMNFQKSFDAHPRRESQVRQMTWAGDG--VWVSIR-LDSTLRMYNAHTYQHLQDV 57 (71)
Q Consensus 4 ~~tl~ve~~f~v~~d~~~~V~~Ma~~g~G--VWiS~~-~~s~lrLfHa~T~e~LqeV 57 (71)
+.|+++.+.+.+.. ....|+..-+| .|.+.. .+..|..|.+.|++.+..|
T Consensus 357 ~~T~kvv~~I~vg~----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIELGH----EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEECCC----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 45677778887765 46778877665 576666 5899999999999999887
No 176
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=24.21 E-value=1.6e+02 Score=21.58 Aligned_cols=33 Identities=6% Similarity=0.042 Sum_probs=27.2
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCccc
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQ 52 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e 52 (71)
...|.++++..++.=++-..+.++|+|...+.+
T Consensus 266 ~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~ 298 (524)
T 2j04_B 266 DSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPE 298 (524)
T ss_dssp TTCEEEEEESSSSEEEEEETTSEEEEEETTBCS
T ss_pred CCCEEEEEecCCCeEEEEeCCCEEEEEECCCCC
Confidence 368999999877876666779999999998764
No 177
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=24.12 E-value=1.5e+02 Score=23.14 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=28.5
Q ss_pred CCceeEEEEeCCeEEEEEecCCeEeEEecCcccc
Q psy2157 20 ESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQH 53 (71)
Q Consensus 20 ~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~ 53 (71)
...|.+++++-+| =++...|.++|+|...+.+.
T Consensus 182 ~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 182 KDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp CCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS
T ss_pred cccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc
Confidence 3689999999999 56777899999999988774
No 178
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=24.09 E-value=50 Score=24.04 Aligned_cols=34 Identities=6% Similarity=0.176 Sum_probs=29.5
Q ss_pred CceeEEEEeCCeEEEEEecCCeEeEEecCccccc
Q psy2157 21 SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHL 54 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~L 54 (71)
..+...+++-+|=++++..+..|+++...+.+..
T Consensus 110 ~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF 143 (719)
T ss_dssp SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCE
T ss_pred cccccceECCCCCEEEEEECCeEEEEeCCCCCcE
Confidence 3478899999999999999999999999887654
No 179
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=22.02 E-value=1.5e+02 Score=23.82 Aligned_cols=40 Identities=13% Similarity=0.353 Sum_probs=33.7
Q ss_pred CCCceeEEEEeCCeEEEEEecCCeEeEEecCccccceeeec
Q psy2157 19 RESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDI 59 (71)
Q Consensus 19 ~~~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~LqeVnI 59 (71)
.+..|.++... +..=+++..+-+||+|...|++.+++.|+
T Consensus 220 ~~~~Is~~~~~-~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 220 YDSVISCKLFH-ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CCCEEEEEEET-TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCceEEEeccC-CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 44568877654 66777899999999999999999999999
No 180
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=21.54 E-value=2e+02 Score=19.51 Aligned_cols=38 Identities=11% Similarity=0.336 Sum_probs=28.5
Q ss_pred eeecCCCCceeEEEEeCCe--EEEEEecCCeEeEEecCcc
Q psy2157 14 DAHPRRESQVRQMTWAGDG--VWVSIRLDSTLRMYNAHTY 51 (71)
Q Consensus 14 ~v~~d~~~~V~~Ma~~g~G--VWiS~~~~s~lrLfHa~T~ 51 (71)
..+......|+.+++...| +-++...+..|++|...+.
T Consensus 372 ~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 372 FIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 3444556789999999877 4566677999999987653
No 181
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=20.88 E-value=69 Score=23.30 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=27.5
Q ss_pred ceeEEEEeCCeEEEEEecC----------CeEeEEecCcccc
Q psy2157 22 QVRQMTWAGDGVWVSIRLD----------STLRMYNAHTYQH 53 (71)
Q Consensus 22 ~V~~Ma~~g~GVWiS~~~~----------s~lrLfHa~T~e~ 53 (71)
.|...+++-+|=++++..+ ..|+++...+.+.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 4889999999999988764 8999999988776
No 182
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=20.64 E-value=43 Score=24.20 Aligned_cols=35 Identities=9% Similarity=0.224 Sum_probs=29.9
Q ss_pred CceeEEEEeCCeEEEEEecCCeEeEEecCccccce
Q psy2157 21 SQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 55 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~s~lrLfHa~T~e~Lq 55 (71)
..|...+++-+|=++++..+..|+++...+.+..+
T Consensus 114 ~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~ 148 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIR 148 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEE
T ss_pred ccccccEECCCCCEEEEEECCeEEEEECCCCceEE
Confidence 34888999999999999998999999998876654
No 183
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=20.61 E-value=1.7e+02 Score=20.05 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=27.9
Q ss_pred CceeEEEEeCCeEEEEEecC----CeEeEEecCccccc
Q psy2157 21 SQVRQMTWAGDGVWVSIRLD----STLRMYNAHTYQHL 54 (71)
Q Consensus 21 ~~V~~Ma~~g~GVWiS~~~~----s~lrLfHa~T~e~L 54 (71)
..|.+++++-+|=++++... ..|++|...|.+..
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR 216 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE
Confidence 56899999999988887653 49999999887764
No 184
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=20.37 E-value=2.3e+02 Score=19.79 Aligned_cols=36 Identities=11% Similarity=0.191 Sum_probs=28.2
Q ss_pred CCCceeEEEEeCC--eEEEEEecCCeEeEEecCccccc
Q psy2157 19 RESQVRQMTWAGD--GVWVSIRLDSTLRMYNAHTYQHL 54 (71)
Q Consensus 19 ~~~~V~~Ma~~g~--GVWiS~~~~s~lrLfHa~T~e~L 54 (71)
....|+++++.-. ..-++...+.++|+|...+.+.+
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE
T ss_pred CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce
Confidence 4578999999864 46666788999999999886543
No 185
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=20.33 E-value=94 Score=22.78 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=28.7
Q ss_pred EEeeecCCCCceeEE--EEeCCe--EEEEEecCCeEeEEecCccccc
Q psy2157 12 SFDAHPRRESQVRQM--TWAGDG--VWVSIRLDSTLRMYNAHTYQHL 54 (71)
Q Consensus 12 ~f~v~~d~~~~V~~M--a~~g~G--VWiS~~~~s~lrLfHa~T~e~L 54 (71)
.|..|. ..|+.+ +.+.+| +=++-..+.++|||...+.+++
T Consensus 303 ~~~~H~---~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 303 YDQVHD---SYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT 346 (524)
T ss_dssp EEECSS---SCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH
T ss_pred Eeeccc---ccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc
Confidence 355543 568888 446666 5577888999999999876644
Done!