RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2158
(98 letters)
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 40.5 bits (94), Expect = 2e-06
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 9 NVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ GLVI + GD+G Y C A NE G+ +Q
Sbjct: 53 DSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQ 87
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 37.5 bits (86), Expect = 3e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
Y ++ + L+++S+ P D+G YTC NE+G +
Sbjct: 53 GGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 95
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 36.7 bits (84), Expect = 4e-05
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I + G YT N+ G V +
Sbjct: 58 LTILAARQEHCGCYTLLVENKLGSRQAQVNLT 89
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 37.4 bits (85), Expect = 5e-05
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ + ++ DEG YT +N GE + ++
Sbjct: 85 VRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVK 127
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 36.1 bits (82), Expect = 1e-04
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I ++ D GEYTC A N G + + ++
Sbjct: 65 GVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLT 107
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 35.3 bits (80), Expect = 2e-04
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAI 37
+ Q L + S+ D G Y C + I
Sbjct: 45 IPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEI 81
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 34.5 bits (78), Expect = 4e-04
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I ++ DE EY C A N+ GE ++ ++
Sbjct: 65 LTIRNVDKNDEAEYVCIAENKAGEQDASIHLK 96
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 34.5 bits (78), Expect = 4e-04
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I+ + D+GEYT A+N +G VF+
Sbjct: 59 LTINRVKGDDKGEYTVRAKNSYGTKEEIVFLN 90
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 34.2 bits (77), Expect = 5e-04
Identities = 6/32 (18%), Positives = 8/32 (25%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I P G Y C + +
Sbjct: 74 LHITDAQPAFTGGYRCEVSTKDKFDCSNFNLT 105
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 34.1 bits (77), Expect = 6e-04
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ + + L ++ + G YT A N FG+A ++
Sbjct: 54 PAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAA 96
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 33.8 bits (76), Expect = 7e-04
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 2 SYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAIC--AVFIQPECVNVP 50
S+ + L+ D + D GEY C A+N +G A+ A + +NV
Sbjct: 59 SFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVELNVG 109
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 33.6 bits (76), Expect = 7e-04
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I ++ DEG Y C A N G I
Sbjct: 57 LHIQNVDFEDEGTYECEAENIKGRDTYQGRII 88
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 33.9 bits (76), Expect = 9e-04
Identities = 5/32 (15%), Positives = 10/32 (31%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ I G Y C + C+ ++
Sbjct: 70 MQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLE 101
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 32.9 bits (74), Expect = 0.001
Identities = 7/40 (17%), Positives = 12/40 (30%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAV 40
+ L+I+ D EY+ A +V
Sbjct: 48 YRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSAKLSV 87
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 32.9 bits (74), Expect = 0.001
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 16 SIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ D+ +YTC A N GEA C +
Sbjct: 71 EVCGDDDAKYTCKAVNSLGEATCTAELL 98
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 32.7 bits (73), Expect = 0.001
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAI 37
+ + D G+Y C R E G I
Sbjct: 62 FNVVNTTKRDAGKYRCMIRTEGGVGI 87
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 32.5 bits (73), Expect = 0.002
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 13 VIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
I S+ DEG Y+ N G+ +
Sbjct: 58 EISSVQASDEGNYSVVVENSEGKQEAEFTLT 88
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 32.7 bits (73), Expect = 0.002
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQPECVNVPLYQ 53
+ G V L I ++ DEG YTC R+ + AV ++ V P Y
Sbjct: 72 LKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELK---VEDPFYW 121
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 31.8 bits (71), Expect = 0.003
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 13 VIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
VI + D A N GE F+
Sbjct: 64 VIRDVTGEDSASIMVKAINIAGETSSHAFLL 94
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 31.4 bits (70), Expect = 0.005
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L + D G Y C A N+ G + +
Sbjct: 55 LRFSKLVLEDSGMYQCVAENKHGTVYASAELT 86
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 31.2 bits (69), Expect = 0.006
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ + G+ S+ D GEYTC E G+ V I
Sbjct: 56 YADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIH 98
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 31.4 bits (70), Expect = 0.006
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAI 37
++ + + D G Y C A N G +
Sbjct: 64 VISNPVKAKDAGSYQCVATNARGTVV 89
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 31.2 bits (69), Expect = 0.007
Identities = 11/29 (37%), Positives = 11/29 (37%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAV 40
LV DEG Y C A G A V
Sbjct: 60 LVFLRPQASDEGHYQCFAETPAGVASSRV 88
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 31.1 bits (69), Expect = 0.007
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 2 SYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
SY LV D + D GEY+C ARN +G + + ++
Sbjct: 58 SYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVR 99
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 31.0 bits (69), Expect = 0.008
Identities = 11/31 (35%), Positives = 11/31 (35%)
Query: 13 VIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
I I DEG Y C R I IQ
Sbjct: 59 QIRGIKKTDEGTYRCEGRILARGEINFKDIQ 89
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 30.5 bits (67), Expect = 0.012
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 12 LVIDSIGPGDEG-EYTCCARNEFGEAICAVFIQP 44
L I I +TC A+N G + +
Sbjct: 72 LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 105
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 29.5 bits (65), Expect = 0.029
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 8 GNVGLVIDSIGPGDEGEYTCCARNEFG 34
L++ S+ D G Y+C
Sbjct: 58 MGRRLLLRSVQLHDSGNYSCYRAGRPA 84
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 29.2 bits (64), Expect = 0.031
Identities = 9/50 (18%), Positives = 16/50 (32%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQPECVNVP 50
L I D G Y+C A + +VF + +++
Sbjct: 52 GRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLA 101
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 29.5 bits (65), Expect = 0.037
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARN 31
DP + +VI ++ D G +TC +N
Sbjct: 72 WVGDPSWKDGSIVIHNLDYSDNGTFTCDVKN 102
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 28.8 bits (63), Expect = 0.039
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
L I ++ P D G Y C N F +
Sbjct: 56 LTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 87
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 29.0 bits (64), Expect = 0.040
Identities = 7/29 (24%), Positives = 8/29 (27%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAV 40
L I D+ Y C E V
Sbjct: 64 LTISQCSLADDAAYQCVVGGEKCSTELFV 92
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 28.9 bits (63), Expect = 0.043
Identities = 9/50 (18%), Positives = 15/50 (30%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQPECVNVP 50
G L+I ++ GD G Y C + + + V
Sbjct: 41 SPKYGLMGRKNLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAKHVLEVK 90
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 28.5 bits (63), Expect = 0.060
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 7 SGNVGLVIDSIGPGDEGEYTCCARNEFGEAI 37
N L I ++ D G Y + G I
Sbjct: 57 LANGDLKIKNLTRDDSGTYNVTVYSTNGTRI 87
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 27.9 bits (61), Expect = 0.092
Identities = 3/39 (7%), Positives = 10/39 (25%)
Query: 3 YDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVF 41
+ V + +++C + +F
Sbjct: 53 AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLRPQGLELF 91
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 27.6 bits (60), Expect = 0.14
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAV 40
S D +SG+ + + ++ D G Y C + G A +
Sbjct: 79 TSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKI 118
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 27.6 bits (60), Expect = 0.14
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 8 GNVGLVIDSIGPGDEGEYTCCARNEFGEA 36
+ L I ++ DE EY + N
Sbjct: 58 VSGSLTIYNLTSSDEDEYEMESPNITDTM 86
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 27.2 bits (59), Expect = 0.16
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICA 39
++ ++ L+ + P DEG YTC N G+
Sbjct: 52 ITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH 90
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 27.5 bits (60), Expect = 0.18
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 6 QSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAV 40
L++ ++ G YTC A + +
Sbjct: 54 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPI 88
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 27.2 bits (59), Expect = 0.18
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNE 32
+ + N+ +VI ++ P DEG Y C
Sbjct: 56 RTIFDITNNLSIVILALRPSDEGTYECVVLKY 87
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 27.4 bits (59), Expect = 0.19
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 1 MSYDPQSGNVGLVIDSIGP-GDEGEYTCCARNEFGEAICAVFIQ 43
+ L I +I + Y C A N FG + ++
Sbjct: 60 TISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLK 103
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 26.9 bits (58), Expect = 0.21
Identities = 5/32 (15%), Positives = 12/32 (37%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ + D G+Y C + G + ++
Sbjct: 68 HIENLNMEADPGQYRCNGTSSKGSDQAIITLR 99
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 118
Score = 27.1 bits (59), Expect = 0.22
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ + L++ + P D G Y R E ++ + ++
Sbjct: 70 LMGNMDHKVCNLLLKDLKPEDSGTYNF--RFEISDSNRWLDVK 110
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 26.8 bits (58), Expect = 0.23
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 6 QSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ L+ + + G YT A+N G A +
Sbjct: 58 EISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGH 95
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 27.0 bits (58), Expect = 0.24
Identities = 10/43 (23%), Positives = 15/43 (34%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
G+ S+ D G YTC E G + V ++
Sbjct: 59 YEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVK 101
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 26.5 bits (57), Expect = 0.29
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 14 IDSIGPGDEGEYTCCARNEFGEAICAVFIQPECVNVP 50
++ EG Y C AR+ GE V + V P
Sbjct: 51 SVTVTRDLEGTYLCRARSTQGEVTREVTVN---VLSP 84
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 26.5 bits (57), Expect = 0.35
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 5 PQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICA 39
V++ G ++C A N G A
Sbjct: 44 GGPAPSPSVLNVTGVTQSTMFSCEAHNLKGLASSR 78
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 25.5 bits (56), Expect = 0.59
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARN 31
+ +D + G +I + + G TC A
Sbjct: 53 IIWDSR---KGFIISNATYKEIGLLTCEATV 80
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 25.9 bits (56), Expect = 0.61
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 7 SGNVGLVIDSIGPGDEGEYTCCARN 31
GN L+I ++ D Y C +
Sbjct: 64 QGNFPLIIKNLKIEDSDTYICEVED 88
>d1ncna_ b.1.1.1 (A:) CD86 (b7-2), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 110
Score = 25.2 bits (54), Expect = 1.0
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 2 SYDPQSGNVGLVIDSIGPGDEGEYTC 27
S + L + ++ D+G Y C
Sbjct: 61 RTSFDSDSWTLRLHNLQIKDKGLYQC 86
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 24.9 bits (53), Expect = 1.1
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVFIQ 43
+ + L +D+ + G+YT A+NE+G+ +
Sbjct: 53 HVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAH 95
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid binding
Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 121
Score = 25.1 bits (54), Expect = 1.2
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTC 27
+ DPQ+ N L I D G Y
Sbjct: 74 LLGDPQTKNCTLSIRDARMSDAGRYFF 100
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 24.9 bits (53), Expect = 1.3
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAV 40
+ S D G Y +NE GE
Sbjct: 60 IFFPSAKRADSGNYKLKVKNELGEDEAIF 88
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 23.8 bits (50), Expect = 2.4
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFG 34
L I + D GEY C +
Sbjct: 50 LNIVNAKFEDSGEYKCQHQQVNE 72
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 24.3 bits (51), Expect = 2.6
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 20 GDEGEYTCCARNEFGEA 36
D +Y C A+N +
Sbjct: 76 SDIYKYVCTAKNAAVDE 92
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 23.8 bits (50), Expect = 3.6
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 14 IDSIGPGDEGEYTCCARNEFGEA 36
+ + P D G Y C A +
Sbjct: 69 FEPVLPNDNGSYRCSANFQSNLI 91
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 23.5 bits (50), Expect = 3.6
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 8 GNVGLVIDSIGPGDEGEYTC 27
N L+ I D G YT
Sbjct: 69 SNGSLLFQMITMKDMGVYTL 88
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 23.6 bits (50), Expect = 4.0
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEAICAV 40
L++ + G GE + A N A V
Sbjct: 58 LILHNCQLGMTGEVSFQAANAKSAANLKV 86
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 23.0 bits (48), Expect = 5.0
Identities = 5/25 (20%), Positives = 9/25 (36%)
Query: 12 LVIDSIGPGDEGEYTCCARNEFGEA 36
+ I + D G Y C + +
Sbjct: 51 ISITNATVEDSGTYYCTGKVWQLDY 75
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 23.0 bits (48), Expect = 5.9
Identities = 5/41 (12%), Positives = 11/41 (26%)
Query: 1 MSYDPQSGNVGLVIDSIGPGDEGEYTCCARNEFGEAICAVF 41
+ PQ + ++C A + +F
Sbjct: 54 AAPAPQEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIF 94
>d1y60a_ d.14.1.12 (A:) Formaldehyde-activating enzyme, FAE
{Methylobacterium extorquens [TaxId: 408]}
Length = 168
Score = 23.1 bits (50), Expect = 7.5
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 8/36 (22%)
Query: 13 VIDSIGPGDEGEYTCCARNEFGEAICAVFIQPECVN 48
V + I P DE + + VFI E +
Sbjct: 98 VAEGIIPADEADDLYV--------LVGVFIHWEAAD 125
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.384
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 329,878
Number of extensions: 12373
Number of successful extensions: 96
Number of sequences better than 10.0: 1
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 69
Length of query: 98
Length of database: 2,407,596
Length adjustment: 60
Effective length of query: 38
Effective length of database: 1,583,796
Effective search space: 60184248
Effective search space used: 60184248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.5 bits)