RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2159
(194 letters)
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 119 bits (298), Expect = 7e-35
Identities = 117/184 (63%), Positives = 146/184 (79%)
Query: 11 VLLRLGLWKKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTH 70
VL LGL+KK+GKL+FLGLDNAGKT LL MLK+DR QH+PTLHPTSEEL++ + FTT
Sbjct: 3 VLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTF 62
Query: 71 DLGGHVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGN 130
DLGGH+QARRVW++Y PA++ IVF++D +D R ESK ELD+L+ D+ + +VPILILGN
Sbjct: 63 DLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGN 122
Query: 131 KIDIFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLA 190
KID +A SE+ +R FGLYG TTGK + L RP+E+FMCSVLKRQG+G GFRW+A
Sbjct: 123 KIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 182
Query: 191 NYID 194
YID
Sbjct: 183 QYID 186
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 95.9 bits (237), Expect = 7e-26
Identities = 98/171 (57%), Positives = 120/171 (70%), Gaps = 5/171 (2%)
Query: 22 GKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRV 81
GKLLFLGLDNAGKT LL MLKNDR A PT HPTSEEL++G+I FTT DLGGH+QARR+
Sbjct: 1 GKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRL 60
Query: 82 WRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAASED 141
W+DYFP V+ IVF++DA+D RF E++ ELD L L DVP +ILGNKID +A SE
Sbjct: 61 WKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEA 120
Query: 142 EVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANY 192
E+R GL T + RP+E+FMCSV+ R G+ F+WL+ Y
Sbjct: 121 ELRSALGLLNTTGSQRIE-----GQRPVEVFMCSVVMRNGYLEAFQWLSQY 166
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 91.9 bits (227), Expect = 3e-24
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 12/175 (6%)
Query: 19 KKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQA 78
+ ++L LGLDNAGKT LL+ L ++ + PT + + D+GG +
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKI 73
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
R WR YF D ++++ID++DR RF E+ EL LL ++ L+ VP+LI NK D+ AA
Sbjct: 74 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAA 133
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E+ L ++ R ++ CS L +G +G W+ +
Sbjct: 134 PASEIAEGLNL------------HTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 91.6 bits (226), Expect = 3e-24
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 12 LLRLGLWKKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHD 71
+L K ++L LGLD AGKT +L LK ++ +PT+ E ++ ++ F D
Sbjct: 3 VLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWD 62
Query: 72 LGGHVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNK 131
+GG + R +WR Y+ ++F++D +DR R E++ EL ++ D + D ILI NK
Sbjct: 63 VGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANK 122
Query: 132 IDIFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLAN 191
D+ DA E++ GL ++ R + G G WL +
Sbjct: 123 QDLPDAMKPHEIQEKLGL------------TRIRDRNWYVQPSCATSGDGLYEGLTWLTS 170
Query: 192 YI 193
Sbjct: 171 NY 172
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 89.6 bits (221), Expect = 2e-23
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 8 FREVLLRLGLWKKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVF 67
F + +L K ++L LGLD AGKT +L L+ PT+ E LS ++
Sbjct: 4 FSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKL 63
Query: 68 TTHDLGGHVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILI 127
DLGG R WR Y+ A++F++D++D+ R + EL +L ++ L D +L+
Sbjct: 64 NVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLV 123
Query: 128 LGNKIDIFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFR 187
NK D A S EV L L+ R + S +K +G G
Sbjct: 124 FANKQDQPGALSASEVSKELNLVE------------LKDRSWSIVASSAIKGEGITEGLD 171
Query: 188 WLANYI 193
WL + I
Sbjct: 172 WLIDVI 177
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 86.2 bits (212), Expect = 5e-22
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 12 LLRLGLWKKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHD 71
+ RL + K++ +GLDNAGKT +L + PT+ EE+ + + F D
Sbjct: 7 IWRL-FNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWD 65
Query: 72 LGGHVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNK 131
+GG R W Y+ + ++ ++D++DR R ++ EL +LA + L +LI NK
Sbjct: 66 IGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANK 125
Query: 132 IDIFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLAN 191
D+ + + E+ F L ++ + C L +G G W+ +
Sbjct: 126 QDVKECMTVAEISQFLKL------------TSIKDHQWHIQACCALTGEGLCQGLEWMMS 173
Query: 192 YI 193
+
Sbjct: 174 RL 175
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 84.3 bits (207), Expect = 1e-21
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRVW 82
++L +GLD AGKT +L LK +PT+ E + +I FT D+GG + R +W
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLW 61
Query: 83 RDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAASEDE 142
R YF ++F++D++DR R E++ EL +LA+D L D +L+ NK D+ +A + E
Sbjct: 62 RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAE 121
Query: 143 VRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ GL L+ R + G G WL+N +
Sbjct: 122 ITDKLGL------------HSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 85.2 bits (210), Expect = 3e-21
Identities = 28/148 (18%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 17 LWKKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHV 76
+++ + +LL LG +GK+ +++ ++ + T + + + F D+GG
Sbjct: 2 VYRATHRLLLLGAGESGKSTIVKQMRIL---HVVLTSGIFETKFQVDKVNFHMFDVGGQR 58
Query: 77 QARRVWRDYFPAVDAIVFIIDAS----------DRSRFPESKYELDNLLADDALTDVPIL 126
RR W F V AI+F++ +S +R E+ ++ + L + ++
Sbjct: 59 DERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVI 118
Query: 127 ILGNKIDIFDA---ASEDEVRHFFGLYG 151
+ NK D+ A + ++ +F +
Sbjct: 119 LFLNKQDLLAEKVLAGKSKIEDYFPEFA 146
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 78.6 bits (192), Expect = 3e-19
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 20 KSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQAR 79
+ +LL LGLDNAGKT +L+ + PTL + L D+GG R
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLR 60
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAAS 139
WR+YF + D +++++D++DR R + + EL +LL ++ L +LI NK D+ A S
Sbjct: 61 SYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALS 120
Query: 140 EDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ ++ L ++ + CS + + G WL + I
Sbjct: 121 CNAIQEALELDS------------IRSHHWRIQGCSAVTGEDLLPGIDWLLDDI 162
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 69.3 bits (168), Expect = 9e-16
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 13/175 (7%)
Query: 20 KSGKLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQA 78
+ +L +GL +GKT + ++ + + +PT+ +++ G++ D+GG +
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRF 60
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
R +W Y V AIV+++DA+D+ + SK EL NLL L +P+L+LGNK D+ A
Sbjct: 61 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGAL 120
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E E+ L +Q R + + S ++ +WL +
Sbjct: 121 DEKELIEKMNL------------SAIQDREICCYSISCKEKDNIDITLQWLIQHS 163
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 68.9 bits (167), Expect = 3e-15
Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 7/129 (5%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRV- 81
+LF+GL ++GKT L L + ++ +S + + + L +
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLR 61
Query: 82 ---WRDYFPAVDAIVFIIDASDRSRFPES-KYELDNLLADDALTD--VPILILGNKIDIF 135
+ + A+VF++D++ R + L +L D +LI NK DI
Sbjct: 62 FQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIA 121
Query: 136 DAASEDEVR 144
A S ++
Sbjct: 122 MAKSAKLIQ 130
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 64.7 bits (156), Expect = 6e-14
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 19 KKSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQA 78
+ ++L LGLD AGKT +L L+ +PT+ E ++ ++ F DLGG
Sbjct: 3 TREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSI 62
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
R WR Y+ DA+++++D+ DR R SK EL +L ++ L +++ NK D+ A
Sbjct: 63 RPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAM 122
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ E+ + G L+ R ++F S K G WL +
Sbjct: 123 TSSEMANSLG------------LPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 165
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 64.5 bits (156), Expect = 9e-14
Identities = 29/156 (18%), Positives = 65/156 (41%), Gaps = 14/156 (8%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRVW 82
K+L LG +GK+ L+ ++ PT + + ++ F D+GG R+ W
Sbjct: 4 KILLLGAGESGKSTFLKQMRIIHG--QDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRW 61
Query: 83 RDYFPAVDAIVFIIDASDRSRF----------PESKYELDNLLADDALTDVPILILGNKI 132
+ F +V +I+F++ +S+ + ES + ++ + ++V I++ NK
Sbjct: 62 FECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKT 121
Query: 133 DIFDAA--SEDEVRHFFGLYGLTTGKEFTPREILQM 166
D+ + +F G + +++
Sbjct: 122 DLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVEC 157
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 60.3 bits (145), Expect = 3e-12
Identities = 35/195 (17%), Positives = 69/195 (35%), Gaps = 22/195 (11%)
Query: 20 KSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQAR 79
+ KLL LG +GK+ ++ ++ +PT + ++F D+GG R
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHG-SGVPTTGIIEYPFDLQSVIFRMVDVGGQRSER 59
Query: 80 RVWRDYFPAVDAIVFIIDASDRSR----------FPESKYELDNLLADDALTDVPILILG 129
R W F V +I+F++ S+ + ESK ++ + +++
Sbjct: 60 RKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFL 119
Query: 130 NKIDIFDAA--SEDEVRHFFGLYGLTTGKEFTPREILQM---------RPMELFMCSVLK 178
NK D+ + V +F G + IL+M + +
Sbjct: 120 NKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATD 179
Query: 179 RQGFGNGFRWLANYI 193
+ F + + I
Sbjct: 180 TENIRFVFAAVKDTI 194
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 58.0 bits (139), Expect = 1e-11
Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 23/178 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPT----LHPTSEELSMGDIVFTTHDLGGHVQA 78
K++ LG GK+ L + + E+ V D G Q
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQF 64
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI--FD 136
+ Y + + ++ F + K D ++ VP++++GNK+D+
Sbjct: 65 ASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESER 124
Query: 137 AASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYID 194
S E R +G S + F + ++
Sbjct: 125 EVSSSEGRALAEEWG-----------------CPFMETSAKSKTMVDELFAEIVRQMN 165
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 58.4 bits (140), Expect = 1e-11
Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 16/150 (10%)
Query: 20 KSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQAR 79
+ KLL LG +GK+ +++ +K H + D+ F D+GG R
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMKII----HEAGTGIVETHFTFKDLHFKMFDVGGQRSER 56
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKY----------ELDNLLADDALTDVPILILG 129
+ W F V AI+F + SD D++ + TD I++
Sbjct: 57 KKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFL 116
Query: 130 NKIDIFD--AASEDEVRHFFGLYGLTTGKE 157
NK D+F+ + G T +E
Sbjct: 117 NKKDLFEEKIKKSPLTICYPEYAGSNTYEE 146
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 57.2 bits (137), Expect = 3e-11
Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR---TAQHMPTLHPTSEELSMGD--IVFTTHDLGGHVQ 77
K++ +G GK+ LL + ++ + + + + I D G +
Sbjct: 6 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 65
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
RR+ Y+ + + D + + + L L D A +++ I+++GNK D+
Sbjct: 66 YRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELR-DHADSNIVIMLVGNKSDLRHL 124
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ + + S L F+ + I
Sbjct: 125 RAVPTDEAR---------------AFAEKNNLSFIETSALDSTNVEEAFKNILTEI 165
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 56.7 bits (136), Expect = 4e-11
Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 22/176 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTLHPTSE----ELSMGDIVFTTHDLGGHVQ 77
K+L +G GK+ LL D+ + T+ + +++ + D G +
Sbjct: 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQER 63
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y+ I+ + D +D F + + + + A + +L++GNK D
Sbjct: 64 FRTITTAYYRGAMGIILVYDITDERTF-TNIKQWFKTVNEHANDEAQLLLVGNKSD---- 118
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E R G KE + S F LA I
Sbjct: 119 ---METRVVTADQGEALAKEL---------GIPFIESSAKNDDNVNEIFFTLAKLI 162
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 56.7 bits (136), Expect = 5e-11
Identities = 35/176 (19%), Positives = 57/176 (32%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR---TAQHMPTLHPTSEELSMGD--IVFTTHDLGGHVQ 77
KLL +G GKT +L D T + + + I D G +
Sbjct: 8 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 67
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y+ I+ + D ++ F + + N+ + DV +ILGNK D+ D
Sbjct: 68 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEKMILGNKCDVNDK 126
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ R + ++ S N F LA I
Sbjct: 127 RQVSKERGEK---------------LALDYGIKFMETSAKANINVENAFFTLARDI 167
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 56.8 bits (136), Expect = 6e-11
Identities = 37/176 (21%), Positives = 60/176 (34%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTL----HPTSEELSMGDIVFTTHDLGGHVQ 77
KLL +G GK+ LL +D T ++ T+ + EL + D G +
Sbjct: 8 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 67
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y+ I+ + D +D+ F K L + A + V L++GNK D+ D
Sbjct: 68 FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEID-RYATSTVLKLLVGNKCDLKDK 126
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ M S L + F +A I
Sbjct: 127 RVVEYDVAKE---------------FADANKMPFLETSALDSTNVEDAFLTMARQI 167
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 53.4 bits (127), Expect = 1e-09
Identities = 33/186 (17%), Positives = 60/186 (32%), Gaps = 30/186 (16%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTL--------------HPTSEELSMGDIVF 67
KLL LG GKT L +++ + + T+ P +
Sbjct: 7 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 66
Query: 68 TTHDLGGHVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILI 127
D G + R + +F + + D + + F + + L A+ + I++
Sbjct: 67 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 126
Query: 128 LGNKIDIFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFR 187
+GNK D+ D +E + RE+ + F S Q
Sbjct: 127 IGNKADLPDQREVNERQA---------------RELADKYGIPYFETSAATGQNVEKAVE 171
Query: 188 WLANYI 193
L + I
Sbjct: 172 TLLDLI 177
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 52.5 bits (125), Expect = 2e-09
Identities = 32/176 (18%), Positives = 54/176 (30%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K+L +G GK+ LL +D A + + D G +
Sbjct: 9 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 68
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y+ ++ + D + R F + L+ L D+ +++GNKID +
Sbjct: 69 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENR 128
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
EV + + M S G F L I
Sbjct: 129 ----EVDR------------NEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 168
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 52.2 bits (124), Expect = 2e-09
Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K + +G GK+ LL + R + I D G
Sbjct: 5 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 64
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + R Y+ + + D + R F L++ + +++ I+++GNK D+
Sbjct: 65 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDAR-QHSSSNMVIMLIGNKSDL--- 120
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ R G +E + S F A I
Sbjct: 121 ---ESRRDVKREEGEAFAREHG---------LIFMETSAKTACNVEEAFINTAKEI 164
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 51.9 bits (123), Expect = 3e-09
Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 19/175 (10%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQA 78
K++ +G GK+ L D + L ++ D G
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 65
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
+ +YF + + + + ++ F + + +L +VP L++GNK D+ D
Sbjct: 66 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKR 125
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ S R F L I
Sbjct: 126 QVSVEEAKN---------------RADQWNVNYVETSAKTRANVDKVFFDLMREI 165
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 52.3 bits (124), Expect = 3e-09
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Query: 24 LLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRVWR 83
++ G N+GKT LL +L D + + T D GHV+ R
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVRPTVVS-QEPLSAADYDGSGVTLVDFPGHVKLRYKLS 64
Query: 84 DYF----PAVDAIVFIIDAS-DRSRFPESK---YELDNLLADDALTDVPILILGNKIDIF 135
DY V ++F++D++ D + + ++ ++ + ILI NK ++F
Sbjct: 65 DYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELF 124
Query: 136 DAASEDEVR 144
A +++
Sbjct: 125 TARPPSKIK 133
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 51.8 bits (123), Expect = 3e-09
Identities = 27/176 (15%), Positives = 48/176 (27%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K L +G GK+ LL + + + D G +
Sbjct: 7 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 66
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R V R Y+ + + D + R + L + + ++ I++ GNK D+
Sbjct: 67 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS-QNIVIILCGNKKDLDAD 125
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ Q + S L + F A I
Sbjct: 126 REVTFLEAS---------------RFAQENELMFLETSALTGENVEEAFVQCARKI 166
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 50.3 bits (119), Expect = 9e-09
Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K+L +G + GKT L +D + + + I D G +
Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y+ + + D ++ F + + + + +L++GNK D+ D
Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQ-IKTYSWDNAQVLLVGNKCDMEDE 125
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
R ++ E F S F L + I
Sbjct: 126 RVVSSERGR---------------QLADHLGFEFFEASAKDNINVKQTFERLVDVI 166
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 49.5 bits (117), Expect = 2e-08
Identities = 31/178 (17%), Positives = 54/178 (30%), Gaps = 25/178 (14%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K + +G GK+ LL + E+S I D G +
Sbjct: 6 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 65
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKID--IF 135
R V R Y+ + + D + RS + L + + + I+++GNK D
Sbjct: 66 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDAR-NLTNPNTVIILIGNKADLEAQ 124
Query: 136 DAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ +E + F G + S + + F A I
Sbjct: 125 RDVTYEEAKQFAEENG-----------------LLFLEASAKTGENVEDAFLEAAKKI 165
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 47.5 bits (112), Expect = 8e-08
Identities = 30/176 (17%), Positives = 59/176 (33%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K++ +G GKT L++ A + E++ + D G +
Sbjct: 7 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 66
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + + Y+ + +A++ D + F L + A V +++GNKID+ +
Sbjct: 67 FRSITQSYYRSANALILTYDITCEESFRCLPEWLRE-IEQYASNKVITVLVGNKIDLAER 125
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ R E + + M S + F LA +
Sbjct: 126 REVSQQRAE---------------EFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 47.7 bits (112), Expect = 9e-08
Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 20/175 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPT----LHPTSEELSMGDIVFTTHDLGGHVQA 78
KL+ +G GK+ L L + + + + D G +
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
+ Y + + + ++ F + + + DVP++++GNK D+
Sbjct: 65 SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAART 124
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E ++ + + S RQG + F L I
Sbjct: 125 VESRQAQ----------------DLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 46.9 bits (110), Expect = 2e-07
Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 5/174 (2%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDL--GGHVQAR 79
K + +G GKT L+ N +++PT+ M D L +
Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 66
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAAS 139
R + I + E+ + PI+++G K+D+ D
Sbjct: 67 DRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 126
Query: 140 EDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E L ++ ++ CS L ++G F +
Sbjct: 127 TIEKLKEKKLT--PITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 178
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 46.1 bits (108), Expect = 3e-07
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTLHPTSEELSM----GDIVFTTHDLGGHVQ 77
KL+FLG + GKT L+ D + T+ +M I D G +
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y A V + D ++ + F ++ +D++ + +DV I+++GNK D+ D
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVR-TERGSDVIIMLVGNKTDLADK 120
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ + S FR +A +
Sbjct: 121 RQVSIEEGE---------------RKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 46.1 bits (108), Expect = 3e-07
Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 18/175 (10%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPT----LHPTSEELSMGDIVFTTHDLGGHVQA 78
KL+ LG GK+ L + + E+ + D G Q
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQF 64
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
+ Y + + +S F + + + +L DVP++++GNK D+ D
Sbjct: 65 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDER 124
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ + Q S + F L I
Sbjct: 125 VVGKEQGQ--------------NLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 46.5 bits (109), Expect = 3e-07
Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 9/176 (5%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTLH--PTSEELSMGDIVFTTHDLGGHVQAR 79
K + +G GKT L+ + +++PT+ G +
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAAS 139
R + + I + ++ E + +VP L++G +ID+ D
Sbjct: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130
Query: 140 EDEVRHFFGLYGLTT--GKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ + G++ +EI +E CS L ++G F I
Sbjct: 131 TLARLNDMKEKPICVEQGQKLA-KEIGACCYVE---CSALTQKGLKTVFDEAIIAI 182
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 45.2 bits (106), Expect = 6e-07
Identities = 24/178 (13%), Positives = 49/178 (27%), Gaps = 24/178 (13%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTH------DLGGHV 76
K++ +G GKT LL K+ + + V D G
Sbjct: 8 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 67
Query: 77 QARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFD 136
+ R V Y+ A++ + D ++++ F + L + +L+ +
Sbjct: 68 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE 127
Query: 137 AA-SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
++ YG + S F +A +
Sbjct: 128 RVVKREDGEKLAKEYG-----------------LPFMETSAKTGLNVDLAFTAIAKEL 168
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 44.6 bits (104), Expect = 9e-07
Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDL------GGHV 76
K++ +G N GKT L R DI + G
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 63
Query: 77 QARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIF 135
+ + + Y+ V A+VF+ D ++ + F ++ D+P +++GNK D+
Sbjct: 64 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLR 122
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 44.6 bits (104), Expect = 1e-06
Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 5/171 (2%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTL--HPTSEELSMGDIVFTTHDLGGHVQAR 79
K + +G GKT L+ N ++++PT+ + + G+ +
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAAS 139
R + + + E+ E P L++G +ID+ D
Sbjct: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD--D 122
Query: 140 EDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLA 190
+ E + ++ ++ CS L ++G N F
Sbjct: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 44.2 bits (103), Expect = 1e-06
Identities = 29/179 (16%), Positives = 51/179 (28%), Gaps = 23/179 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTLHPTSEELSM----GDIVFTTHDLGGHVQ 77
K++ LG GK+ L+ ++ Q T+ + + D G +
Sbjct: 8 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 67
Query: 78 ARRVWRDYFPAVDAIV---FIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI 134
R + ++ D + + D+ K E P +ILGNKIDI
Sbjct: 68 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI 127
Query: 135 FDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ E + + R+ E S F +
Sbjct: 128 SERQVSTE-----------EAQAWC-RDNGDYPYFE---TSAKDATNVAAAFEEAVRRV 171
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 43.9 bits (102), Expect = 2e-06
Identities = 26/176 (14%), Positives = 52/176 (29%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
KL+ LG GK+ L+ + + + L + F D G +
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 67
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
+ Y+ A + + D ++ F +K + L + ++ I + GNK D+ +
Sbjct: 68 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PNIVIALSGNKADLANK 126
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ D + S F +A +
Sbjct: 127 RAVDFQEAQS---------------YADDNSLLFMETSAKTSMNVNEIFMAIAKKL 167
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 43.1 bits (100), Expect = 3e-06
Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 18/176 (10%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPT-----LHPTSEELSMGDIVFTTHDLGGHVQ 77
KL+ LG GK+ ++ ++ A++ ++ + F D G +
Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
+ Y+ A + + D + F ++++ + L + A D+ I ++GNKID+
Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKE-LHEQASKDIIIALVGNKIDMLQE 123
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E +V ++ + + + F S + + F + I
Sbjct: 124 GGERKVAR------------EEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 42.6 bits (99), Expect = 6e-06
Identities = 20/176 (11%), Positives = 46/176 (26%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K++ LG GKT L+ ++ + + + D G +
Sbjct: 5 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQER 64
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
+ Y+ + + + D +D F + K + L ++
Sbjct: 65 FHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIV---------- 114
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ L + + + S + +G F L +
Sbjct: 115 ------GNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 164
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 41.5 bits (96), Expect = 1e-05
Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 11/174 (6%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTL---HPTSEELSMGDIVFTTHDLGGHVQA 78
KL+ +G GKT LL + D+ ++PT+ + E+ + D G
Sbjct: 4 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDY 63
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
R+ +P D I+ E+ E +VPI+++GNK D+ +
Sbjct: 64 DRLRPLSYPDTDVILMCFSIDSPDSL-ENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 122
Query: 139 SEDEVRHFFGLYGLTT--GKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLA 190
+ G++ ++ CS + G F
Sbjct: 123 HTRRELAKMKQEPVKPEEGRDMAN----RIGAFGYMECSAKTKDGVREVFEMAT 172
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 41.6 bits (96), Expect = 1e-05
Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 5/129 (3%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTLHPTSEELSMGD---IVFTTHDLGGHVQA 78
K++ +G GKT L K+ ++PT+ D I + D G
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 63
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
V +P DA++ D S +S + + + +L++G K D+
Sbjct: 64 DNVRPLSYPDSDAVLICFDISRPETL-DSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDV 122
Query: 139 SEDEVRHFF 147
S
Sbjct: 123 STLVELSNH 131
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 41.2 bits (95), Expect = 2e-05
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 24/176 (13%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
KL+ +G GKT ++ A +HP + G I F D G +
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 64
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
+ Y+ + + D + R + +L+ ++PI++ GNK+DI D
Sbjct: 65 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV--RVCENIPIVLCGNKVDIKDR 122
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ + F + + ++ + S F F WLA +
Sbjct: 123 KVKAKSIVFH-----------------RKKNLQYYDISAKSNYNFEKPFLWLARKL 161
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 41.2 bits (95), Expect = 2e-05
Identities = 26/176 (14%), Positives = 56/176 (31%), Gaps = 22/176 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K++ +G GK+ ++Q +++ D+ D G +
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
+ + Y+ A V + +DR F + + D+P ++ NKID+ D
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREK--VVAEVGDIPTALVQNKIDLLDD 121
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ + + + + SV + F++LA
Sbjct: 122 SCIKNEEAE---------------GLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKH 162
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 40.4 bits (93), Expect = 3e-05
Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 19/175 (10%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTLHPTSEELSMGD---IVFTTHDLGGHVQA 78
KL+ +G GK+ +Q +++ + + PT+ + ++ D D G +
Sbjct: 8 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEF 67
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
+ Y A + + +DR F E +L D P++++GNK D+
Sbjct: 68 GAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQR 127
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ F S R F L +
Sbjct: 128 QVPRSEASA---------------FGASHHVAYFEASAKLRLNVDEAFEQLVRAV 167
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis
[TaxId: 1423]}
Length = 273
Score = 40.6 bits (94), Expect = 5e-05
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 75 HVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI 134
+ARR + +D + ++DA R P S N + +D L + P ++L NK D
Sbjct: 2 MAKARREVTEKLKLIDIVYELVDA----RIPMSS---RNPMIEDILKNKPRIMLLNKADK 54
Query: 135 FDAASEDEVRHFFGLYG 151
DAA + + F G
Sbjct: 55 ADAAVTQQWKEHFENQG 71
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 39.3 bits (90), Expect = 8e-05
Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 22/180 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR---TAQHMPTLHPTSEELSMGDIVFTTHDL---GGHV 76
K++ LG GKT L+ ND+ + ++E+++ T + G
Sbjct: 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 63
Query: 77 QARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDN---LLADDALTDVPILILGNKID 133
+ + + ++ D V + D ++ S F K D ++ P +ILGNKID
Sbjct: 64 RFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKID 123
Query: 134 IFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
++ + + + LF+ S F +A
Sbjct: 124 AEESKKIVSEKSAQ-------------ELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 170
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 39.2 bits (90), Expect = 9e-05
Identities = 25/178 (14%), Positives = 48/178 (26%), Gaps = 24/178 (13%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTL---HPTSEELSMGDIVFTTHDLGGHVQA 78
++ G GK+ +L+ +K ++PT+ + D G Q
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 63
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLAD-DALTDVPILILGNKI--DIF 135
+ R A + + + R E K + + + +PI+++GNK
Sbjct: 64 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPS 123
Query: 136 DAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E + S F+ L N
Sbjct: 124 REVQSSEAEALARTWK-----------------CAFMETSAKLNHNVKELFQELLNLE 164
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 38.9 bits (89), Expect = 1e-04
Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 23/179 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-TAQHMPTL----HPTSEELSMGDIVFTTHDLGGHVQ 77
K++ LG GKT L+ N + + Q+ T+ + + D G +
Sbjct: 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 63
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLL---ADDALTDVPILILGNKIDI 134
+ + ++ D V + D + + F D L + + P ++LG
Sbjct: 64 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG----- 118
Query: 135 FDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
+ L + + F S + F+ +A
Sbjct: 119 ----------NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 167
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 36.2 bits (82), Expect = 8e-04
Identities = 18/116 (15%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQA 78
KL+ +G GK+ L + + E+ + D G +
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI 134
+ Y D + + +D++ F +L P++++ NK+D+
Sbjct: 66 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL 121
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 36.1 bits (82), Expect = 9e-04
Identities = 26/176 (14%), Positives = 46/176 (26%), Gaps = 21/176 (11%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQ 77
K+ LG GK+ ++ D + + + F D G +
Sbjct: 6 KVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLER 65
Query: 78 ARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDA 137
R + Y+ A + + D + F K + L + + I GNK D+ D
Sbjct: 66 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGP-PSIVVAIAGNKCDLTDV 124
Query: 138 ASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
E + S F ++ I
Sbjct: 125 REVMERDAK---------------DYADSIHAIFVETSAKNAININELFIEISRRI 165
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 34.6 bits (78), Expect = 0.003
Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 19/175 (10%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQA 78
+L+ +G GK+ L + + + D G +
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEF 66
Query: 79 RRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAA 138
+ Y + + + +DR F E +L + P++++GNK D+
Sbjct: 67 GAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADL---- 122
Query: 139 SEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
D R G ++ + S R F L I
Sbjct: 123 --DHQRQVTQEEGQQLARQLK---------VTYMEASAKIRMNVDQAFHELVRVI 166
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 34.2 bits (77), Expect = 0.005
Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 3/115 (2%)
Query: 23 KLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGH--VQAR 79
KL G GK+ +++ L ++ PTL T + D + ++ +
Sbjct: 4 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDT 63
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI 134
+ + V + D +DR F E + L +V ++++GNK D+
Sbjct: 64 IQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADL 118
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 33.2 bits (74), Expect = 0.010
Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)
Query: 20 KSGKLLFLGLDNAGKTFLLQMLKNDR----TAQHMPTLHPTSEELSMGDIVFTTHDLGGH 75
KS K+ LG + GK+ L + + ++ + D G
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 76 VQARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIF 135
+ + Y ++ + + + F K LL +PI+++GNK D+
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLH 122
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 32.4 bits (72), Expect = 0.015
Identities = 24/178 (13%), Positives = 52/178 (29%), Gaps = 22/178 (12%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDR---TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQAR 79
+++ +G GK+ L + + T E M D T L + +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 80 RVWRDYFPAVD----AIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIF 135
A + + +DR+ F ++ L D+PI+++GNK
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNK---- 120
Query: 136 DAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
++ + + + +E S + F + +
Sbjct: 121 --------SDLVRCREVSVSEGRACAVVFDCKFIE---TSAAVQHNVKELFEGIVRQV 167
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 31.9 bits (71), Expect = 0.028
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTA----QHMPTLHPTSEELSMGDIVFT---------- 68
+++ +G N GK+ LL L N+ A T SEE+ + I+F
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 69 THDLGGHVQARRVWRDYFPAVDAIVFIIDASDRSRFPESKY 109
T+DL + R ++ A D ++F++DAS + K
Sbjct: 62 TNDLVERLGIERTLQEIEKA-DIVLFVLDASSPLDEEDRKI 101
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 32.4 bits (73), Expect = 0.031
Identities = 22/174 (12%), Positives = 45/174 (25%), Gaps = 18/174 (10%)
Query: 23 KLLFLGLDNAGKTFLLQML----KNDRTAQHMPTLHPTSEELSMGDIV---FTTHDLGGH 75
+ G +GK+ + L + A + T E DL G
Sbjct: 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGI 117
Query: 76 VQARRVWRDYF---PAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKI 132
Y + FII ++ RF ++ ++ ++ + K+
Sbjct: 118 GSTNFPPDTYLEKMKFYEYDFFIIISAT--RFKKNDIDIAKAISMM---KKEFYFVRTKV 172
Query: 133 DIFDAASEDEVRHFFGLYGLTTGKEFTPREILQ---MRPMELFMCSVLKRQGFG 183
D D F + + + +F+ S +
Sbjct: 173 DSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYD 226
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.2 bits (69), Expect = 0.049
Identities = 22/175 (12%), Positives = 44/175 (25%), Gaps = 10/175 (5%)
Query: 20 KSGKLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQAR 79
SG + +G N GK+ LL L + A P + + +
Sbjct: 4 YSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPR---------PQTTRKRLRGILTEGRRQ 54
Query: 80 RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAAS 139
V+ D + + + D+ + + D +
Sbjct: 55 IVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVG 114
Query: 140 EDEVRHFFGLYGLTTGKEFTPREILQMRPM-ELFMCSVLKRQGFGNGFRWLANYI 193
+ + E + ++ P E M S L + L +
Sbjct: 115 KVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALM 169
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.9 bits (68), Expect = 0.051
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPT 52
K+L LG GK+ L ++
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEA 32
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 29.6 bits (65), Expect = 0.16
Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 16/173 (9%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRVW 82
+L LG +GK+ L+ T ++ + D TH + +A
Sbjct: 7 RLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVD--GQTHLVLIREEAGAPD 64
Query: 83 RDYFPAVDAIVFIIDASDRSRFPESKYELDNL--LADDALTDVPILILGNKIDIFDAASE 140
+ DA++F+ D + F L L + + + ++G + I
Sbjct: 65 AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRIS----A 120
Query: 141 DEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYI 193
R + M+ + F+ +A +
Sbjct: 121 SSPRVVGDARARALCAD--------MKRCSYYETCATYGLNVDRVFQEVAQKV 165
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 29.2 bits (64), Expect = 0.21
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 26 FLGLDNAGKTFLLQMLKNDRTA---QHMPTLHPTSEELSMG-DIVFTTHDLGGHVQARRV 81
+G NAGK+ LL + TL P + + + FT D+ G ++
Sbjct: 6 LVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASE 65
Query: 82 WRDYFPAV-------DAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI 134
+ +++++DA+D + D AL P L+ NK+D+
Sbjct: 66 GKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDL 125
Query: 135 FDAASEDEVRHFFGLYGL 152
+ + + GL
Sbjct: 126 LEEEAVKALADALAREGL 143
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 28.5 bits (62), Expect = 0.42
Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 22/132 (16%)
Query: 26 FLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQAR------ 79
F G N GK+ L+ L + + T + + + D+ G
Sbjct: 5 FAGRSNVGKSTLIYRLTGKKVRRG-KRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKEV 63
Query: 80 ---------RVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALT------DVP 124
D +D V ++D + + + D D+P
Sbjct: 64 QERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDIP 123
Query: 125 ILILGNKIDIFD 136
++ NK+D
Sbjct: 124 TIVAVNKLDKIK 135
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 28.1 bits (61), Expect = 0.57
Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 33/188 (17%)
Query: 19 KKSGKLLFLGLDNAGKTFLLQMLKNDRTA----QHMPTLHPTSEELSMGDIVFTTHDLGG 74
G + +G N GK+ LL L + + + T H + G D G
Sbjct: 3 SYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPG 62
Query: 75 HV---------QARRVWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPI 125
+ V+ ++F+++ + + E P+
Sbjct: 63 LHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLR------EGKAPV 116
Query: 126 LILGNKIDIFDAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNG 185
++ NK+D ++ F QM +++ S
Sbjct: 117 ILAVNKVDNVQEKADLLPHLQFLAS--------------QMNFLDIVPISAETGLNVDTI 162
Query: 186 FRWLANYI 193
+ ++
Sbjct: 163 AAIVRKHL 170
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 27.3 bits (59), Expect = 1.1
Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 19 KKSGKLLFLGLDNAGKTFLLQMLKNDRTA----QHMPTLHPTSEELSMGDIVFTTHDLGG 74
+ K+ +G N GK+ L + N A T P +E+ + + D G
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAG 65
Query: 75 HVQARRVWRDYFP 87
+ RV
Sbjct: 66 LRRKSRVEPRTVE 78
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 27.0 bits (58), Expect = 1.2
Identities = 17/179 (9%), Positives = 49/179 (27%), Gaps = 22/179 (12%)
Query: 26 FLGLDNAGKTFLLQMLKNDR-----TAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARR 80
G N GK+ + L N + +++ T ++ G ++
Sbjct: 28 LAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVSKS 87
Query: 81 VWRDYFPAVDAIVFIIDASDRSR-----FPESKYELDNLLADDALTDVPILILGNKIDIF 135
+ ++ + + + + +P++++ K D
Sbjct: 88 EREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKI 147
Query: 136 DAASEDEVRHFFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYID 194
D+ + + + EL + S ++G + + I+
Sbjct: 148 PKGKWDKH------------AKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMIN 194
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 26.8 bits (58), Expect = 1.4
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 26 FLGLDNAGKTFLLQMLKNDRTA---QHMPTLHPTSEELSMGD-IVFTTHDLGGHV 76
+G + GK+ LL ++ + + H TL P + D F DL G +
Sbjct: 6 LVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLI 60
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 25.9 bits (55), Expect = 2.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTA 47
K++ G NAGK+ LL L A
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAA 27
>d1l1sa_ c.114.1.1 (A:) Hypothetical protein MTH1491 {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 25.5 bits (56), Expect = 2.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 92 IVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAASE 140
+VF ID D SR + NL+AD + ++ +++ SE
Sbjct: 4 VVFHIDEDDESRVLLLISNVRNLMADLESVRIEVVAYSMGVNVLRRDSE 52
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 25.4 bits (54), Expect = 4.9
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 25 LFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRVWRD 84
+ G+ GK+ +L +K Q + ++ GD + T G+ + R R
Sbjct: 5 IVTGIPGVGKSTVLAKVKEILDNQGINNKI-----INYGDFMLATALKLGYAKDRDEMRK 59
Query: 85 YFPAVDAIVFIIDASD 100
+ I A
Sbjct: 60 LSVEKQKKLQIDAAKG 75
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 24.9 bits (53), Expect = 5.7
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 20 KSGKLL-FLGLDNAGKTFLLQMLKN 43
+ G L+ G+D AGK+ + L
Sbjct: 1 RRGALIVLEGVDRAGKSTQSRKLVE 25
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 24.9 bits (53), Expect = 5.8
Identities = 17/114 (14%), Positives = 33/114 (28%), Gaps = 12/114 (10%)
Query: 23 KLLFLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLG--GHVQARR 80
+++ LG AGK Q + +S GD++ G QA+
Sbjct: 2 RIILLGAPVAGKGTQAQFIMEKYGIPQ----------ISTGDMLRAAVKSGSELGKQAKD 51
Query: 81 VWRDYFPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDI 134
+ D +V + ++ L + + G +D
Sbjct: 52 IMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDY 105
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 24.7 bits (52), Expect = 6.3
Identities = 16/169 (9%), Positives = 37/169 (21%), Gaps = 9/169 (5%)
Query: 26 FLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSEELSMGDIVFTTHDLGGHVQARRVWRDY 85
+G N GK+ L L + A T + + +
Sbjct: 5 IVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQD 64
Query: 86 FPAVDAIVFIIDASDRSRFPESKYELDNLLADDALTDVPILILGNKIDIFDAASEDEVRH 145
+ ++ + D +L + D ++ D +
Sbjct: 65 IISQKMKEVTLNMIREA---------DLVLFVVDGKRGITKEDESLADFLRKSTVDTILV 115
Query: 146 FFGLYGLTTGKEFTPREILQMRPMELFMCSVLKRQGFGNGFRWLANYID 194
L + E+ + E S + ++
Sbjct: 116 ANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLE 164
>g1avo.1 a.24.8.1 (A:,B:) Proteasome activator reg(alpha) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 200
Score = 24.7 bits (54), Expect = 6.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 101 RSRFPESKYELDNLLADDAL 120
S FP+ ELD L + AL
Sbjct: 27 GSYFPKKISELDAFLKEPAL 46
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 25.0 bits (53), Expect = 6.8
Identities = 7/56 (12%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 4 IWTKFREVLLRLGLWKKSGKLLFLGLDNAGKT-FLLQMLKNDRTAQHMPTLHPTSE 58
+++ + + + ++ GK+ F+ Q TA E
Sbjct: 18 LFSGCTGINDKTLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLE 73
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 24.9 bits (53), Expect = 7.0
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 22 GKLL-FLGLDNAGKTFLLQMLKNDRTAQHMPTLHPTSE 58
K + GL+ AGKT ++ + + T E
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTRE 39
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal
domain {Clostridium acetobutylicum [TaxId: 1488]}
Length = 141
Score = 24.3 bits (52), Expect = 7.2
Identities = 10/84 (11%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 19 KKSGKL-LFLGLDNAGKT-FLLQMLKNDRTAQH-----MPTLHPTSEELSMGDIVFTTHD 71
K G + + +G +GK+ L++ ++ + A+ P + + + +
Sbjct: 4 KDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQ 63
Query: 72 LGGHVQARRVWRDYFPAVDAIVFI 95
+R + + + + I
Sbjct: 64 AVAIKNSREILKYFEEDTEVIAID 87
>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating)
subunit 1 {Thermus thermophilus [TaxId: 274]}
Length = 437
Score = 24.8 bits (53), Expect = 7.6
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 117 DDALTDVPILILGNKIDIFDAASEDEV-RHF 146
+D +P IL ID+ + E +V
Sbjct: 24 EDLFAHLPKEILSPPIDLPEPLPEWKVLEEL 54
>d1enwa_ a.5.4.1 (A:) Elongation factor TFIIS domain 2 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 114
Score = 23.6 bits (51), Expect = 9.6
Identities = 3/17 (17%), Positives = 6/17 (35%)
Query: 156 KEFTPREILQMRPMELF 172
+ TP + +L
Sbjct: 95 GDITPEFLATCDAKDLA 111
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 24.4 bits (52), Expect = 9.6
Identities = 12/84 (14%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 19 KKSGKLLFLGLDNAGKTFLLQ-MLKNDRTAQHMPTLHPTSEELSMG---DIVFTTHDLGG 74
++ + GL +GK+ L + + + + + G D+ F+ D
Sbjct: 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNE 81
Query: 75 HVQARRVWRDYFPAVDAIVFIIDA 98
+++ R A + I
Sbjct: 82 NIR-RIAEVAKLFADSNSIAITSF 104
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.143 0.440
Gapped
Lambda K H
0.267 0.0658 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 765,562
Number of extensions: 34896
Number of successful extensions: 292
Number of sequences better than 10.0: 1
Number of HSP's gapped: 252
Number of HSP's successfully gapped: 93
Length of query: 194
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 113
Effective length of database: 1,295,466
Effective search space: 146387658
Effective search space used: 146387658
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.2 bits)