Your job contains 1 sequence.
>psy2164
MDEKHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVN
LPLVYTQK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2164
(68 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035696 - symbol:Best2 "Bestrophin 2" species:7227... 256 7.6e-21 1
FB|FBgn0040238 - symbol:Best1 "Bestrophin 1" species:7227... 174 4.3e-12 1
FB|FBgn0036491 - symbol:Best4 "Bestrophin 4" species:7227... 170 6.3e-12 1
FB|FBgn0036492 - symbol:Best3 "Bestrophin 3" species:7227... 160 7.8e-11 1
UNIPROTKB|E1C3A0 - symbol:BEST1 "Uncharacterized protein"... 153 2.9e-10 1
UNIPROTKB|E1C882 - symbol:BEST3 "Uncharacterized protein"... 153 6.2e-10 1
UNIPROTKB|F1SDY1 - symbol:BEST2 "Uncharacterized protein"... 140 1.0e-08 1
UNIPROTKB|E1BF90 - symbol:BEST3 "Uncharacterized protein"... 137 3.2e-08 1
UNIPROTKB|F1SH43 - symbol:BEST3 "Uncharacterized protein"... 137 3.2e-08 1
UNIPROTKB|F8VVZ2 - symbol:BEST3 "Bestrophin-3" species:96... 136 3.2e-08 1
UNIPROTKB|E2RSZ4 - symbol:BEST2 "Uncharacterized protein"... 135 3.6e-08 1
UNIPROTKB|Q8NFU1 - symbol:BEST2 "Bestrophin-2" species:96... 135 3.6e-08 1
UNIPROTKB|Q8N1M1 - symbol:BEST3 "Bestrophin-3" species:96... 136 4.1e-08 1
MGI|MGI:3580298 - symbol:Best3 "bestrophin 3" species:100... 136 4.2e-08 1
RGD|1305439 - symbol:Best3 "bestrophin 3" species:10116 "... 136 4.2e-08 1
UNIPROTKB|E1C426 - symbol:BEST4 "Uncharacterized protein"... 132 4.4e-08 1
UNIPROTKB|Q8NFU0 - symbol:BEST4 "Bestrophin-4" species:96... 133 5.2e-08 1
MGI|MGI:2387588 - symbol:Best2 "bestrophin 2" species:100... 130 1.2e-07 1
RGD|1305377 - symbol:Best2 "bestrophin 2" species:10116 "... 130 1.2e-07 1
UNIPROTKB|E1BF86 - symbol:BEST2 "Uncharacterized protein"... 129 1.6e-07 1
UNIPROTKB|A1A4I7 - symbol:BEST1 "Uncharacterized protein"... 129 2.0e-07 1
UNIPROTKB|O76090 - symbol:BEST1 "Bestrophin-1" species:96... 125 5.2e-07 1
UNIPROTKB|Q6UY87 - symbol:BEST1 "Bestrophin-1" species:95... 125 5.2e-07 1
UNIPROTKB|Q8WMR7 - symbol:BEST1 "Bestrophin-1" species:98... 122 6.8e-07 1
RGD|1311656 - symbol:Best1 "bestrophin 1" species:10116 "... 123 7.8e-07 1
WB|WBGene00013921 - symbol:best-22 species:6239 "Caenorha... 122 8.7e-07 1
WB|WBGene00015288 - symbol:best-4 species:6239 "Caenorhab... 122 1.0e-06 1
UNIPROTKB|I3LNI9 - symbol:BEST1 "Bestrophin-1" species:98... 122 1.1e-06 1
WB|WBGene00206487 - symbol:best-19 species:6239 "Caenorha... 120 1.7e-06 1
MGI|MGI:1346332 - symbol:Best1 "bestrophin 1" species:100... 119 2.1e-06 1
UNIPROTKB|A5H7G8 - symbol:VMD2 "Bestrophin" species:9615 ... 118 2.9e-06 1
WB|WBGene00015286 - symbol:best-3 species:6239 "Caenorhab... 117 4.0e-06 1
WB|WBGene00007808 - symbol:best-7 species:6239 "Caenorhab... 114 7.1e-06 1
WB|WBGene00022797 - symbol:best-24 species:6239 "Caenorha... 112 1.4e-05 1
WB|WBGene00007404 - symbol:best-5 species:6239 "Caenorhab... 108 2.4e-05 1
WB|WBGene00007203 - symbol:best-1 species:6239 "Caenorhab... 106 4.0e-05 1
WB|WBGene00011868 - symbol:best-18 species:6239 "Caenorha... 106 4.0e-05 1
WB|WBGene00014989 - symbol:best-23 species:6239 "Caenorha... 102 9.1e-05 1
WB|WBGene00007204 - symbol:best-2 species:6239 "Caenorhab... 101 0.00012 1
UNIPROTKB|Q17529 - symbol:B0564.4 "Uncharacterized protei... 101 0.00012 1
WB|WBGene00011258 - symbol:best-15 species:6239 "Caenorha... 102 0.00013 1
WB|WBGene00009340 - symbol:best-14 species:6239 "Caenorha... 99 0.00019 1
WB|WBGene00007988 - symbol:best-8 species:6239 "Caenorhab... 99 0.00027 1
WB|WBGene00013520 - symbol:best-21 species:6239 "Caenorha... 97 0.00031 1
WB|WBGene00021368 - symbol:best-20 species:6239 "Caenorha... 94 0.00099 1
>FB|FBgn0035696 [details] [associations]
symbol:Best2 "Bestrophin 2" species:7227 "Drosophila
melanogaster" [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0005253 "anion channel activity" evidence=ISS] [GO:0006820
"anion transport" evidence=ISS] [GO:0005777 "peroxisome"
evidence=IDA] GO:GO:0005777 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 eggNOG:NOG315004 EMBL:BT010012
PRIDE:Q7YU35 FlyBase:FBgn0035696 InParanoid:Q7YU35
OrthoDB:EOG4Q574M ArrayExpress:Q7YU35 Bgee:Q7YU35 Uniprot:Q7YU35
Length = 809
Score = 256 (95.2 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 47/67 (70%), Positives = 57/67 (85%)
Query: 1 MDEKHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVN 60
+++K PM+KYW+PL WATNIINRAR++ I SDH+VQTIL E+SDIR RLG LIGYD V
Sbjct: 180 LNQKSPMSKYWMPLVWATNIINRARKDGLIASDHIVQTILVELSDIRRRLGGLIGYDTVC 239
Query: 61 LPLVYTQ 67
+PLVYTQ
Sbjct: 240 VPLVYTQ 246
>FB|FBgn0040238 [details] [associations]
symbol:Best1 "Bestrophin 1" species:7227 "Drosophila
melanogaster" [GO:0005254 "chloride channel activity"
evidence=NAS;IDA] [GO:0072320 "volume-sensitive chloride channel
activity" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IDA] [GO:0006884 "cell volume homeostasis" evidence=IDA]
[GO:0006821 "chloride transport" evidence=IDA] EMBL:AE014297
GO:GO:0016021 GO:GO:0006884 GeneTree:ENSGT00390000002997
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 CTD:7439 eggNOG:NOG315004 RefSeq:NP_001138033.1
UniGene:Dm.3335 STRING:B7Z0U6 PaxDb:B7Z0U6
EnsemblMetazoa:FBtr0114590 GeneID:53431 KEGG:dme:Dmel_CG6264
FlyBase:FBgn0040238 OrthoDB:EOG469P93 GenomeRNAi:53431
NextBio:841124 Bgee:B7Z0U6 GO:GO:0072320 Uniprot:B7Z0U6
Length = 769
Score = 174 (66.3 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 MDEKHPM-TKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNV 59
M++ P +K+WLP+ WA +II RAR+E I D V+TI++E++ R + G LI YD +
Sbjct: 175 MNKAFPRPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTI 234
Query: 60 NLPLVYTQ 67
++PLVYTQ
Sbjct: 235 SVPLVYTQ 242
>FB|FBgn0036491 [details] [associations]
symbol:Best4 "Bestrophin 4" species:7227 "Drosophila
melanogaster" [GO:0006820 "anion transport" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0005253 "anion
channel activity" evidence=ISS] EMBL:AE014296
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 CTD:266675 RefSeq:NP_001097609.1
EnsemblMetazoa:FBtr0113172 GeneID:39660 KEGG:dme:Dmel_CG7259
UCSC:CG7259-RB FlyBase:FBgn0036491 InParanoid:Q9VUM6 OMA:FTMISPR
OrthoDB:EOG4D51CW PhylomeDB:Q9VUM6 GenomeRNAi:39660 NextBio:814741
ArrayExpress:Q9VUM6 Bgee:Q9VUM6 Uniprot:Q9VUM6
Length = 526
Score = 170 (64.9 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 MDEKHPM-TKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNV 59
MD+ P K+W+P+ WA +I+ RARRE I D+ V+TI++E++ +R G L+ YD +
Sbjct: 175 MDQAFPSYPKHWMPIVWAASIVMRARRENKIRDDYAVKTIIDELNQLRGNCGFLLYYDWI 234
Query: 60 NLPLVYTQ 67
++PLVYTQ
Sbjct: 235 SVPLVYTQ 242
>FB|FBgn0036492 [details] [associations]
symbol:Best3 "Bestrophin 3" species:7227 "Drosophila
melanogaster" [GO:0006820 "anion transport" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0005253 "anion
channel activity" evidence=ISS] EMBL:AE014296
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 CTD:144453 EMBL:BT023144
EMBL:BT023181 RefSeq:NP_730039.1 UniGene:Dm.27148
EnsemblMetazoa:FBtr0075618 GeneID:39661 KEGG:dme:Dmel_CG12327
UCSC:CG12327-RA FlyBase:FBgn0036492 eggNOG:NOG279129
InParanoid:Q9VUM7 OMA:NDCEARP OrthoDB:EOG44TMQ1 GenomeRNAi:39661
NextBio:814746 Uniprot:Q9VUM7
Length = 535
Score = 160 (61.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
KHP KYW+P+ WA +I+ RAR+E I D ++++++E++ R LI YD +++PL
Sbjct: 181 KHP--KYWMPIVWAASIVTRARKEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPL 238
Query: 64 VYTQ 67
VYTQ
Sbjct: 239 VYTQ 242
>UNIPROTKB|E1C3A0 [details] [associations]
symbol:BEST1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0030321
"transepithelial chloride transport" evidence=IEA] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IEA] [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] GO:GO:0016323 GO:GO:0051924 GO:GO:0005254
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 GO:GO:0030321 OMA:YTNRVAD
EMBL:AADN02050728 IPI:IPI00579072 Ensembl:ENSGALT00000011683
Uniprot:E1C3A0
Length = 425
Score = 153 (58.9 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P K+W+P W +N+ +AR E I ++Q ILNE++ +R + G L GYD +++PLVY
Sbjct: 177 PHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDWISIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|E1C882 [details] [associations]
symbol:BEST3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0043271 "negative regulation of ion transport" evidence=IEA]
GO:GO:0043271 GO:GO:0005254 GeneTree:ENSGT00390000002997
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 EMBL:AADN02009863 IPI:IPI00577478
Ensembl:ENSGALT00000016288 OMA:LGSTIEM Uniprot:E1C882
Length = 669
Score = 153 (58.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 2 DEKHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNL 61
D K P KYW+P W N+ ++AR E I +QT++NEM+ R L GYD V +
Sbjct: 173 DLKSPHLKYWVPFVWFGNLASKARNEGRIRDSVDLQTLMNEMNKFRSWCSLLFGYDWVGI 232
Query: 62 PLVYTQ 67
PLVYTQ
Sbjct: 233 PLVYTQ 238
>UNIPROTKB|F1SDY1 [details] [associations]
symbol:BEST2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0007608 "sensory perception of smell" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] GO:GO:0005929 GO:GO:0051899 GO:GO:0007608
GO:GO:0005254 GeneTree:ENSGT00390000002997 InterPro:IPR000615
InterPro:IPR021134 PANTHER:PTHR10736 Pfam:PF01062 CTD:54831
KO:K13879 OMA:FSNLAAQ EMBL:CU914382 RefSeq:XP_003123378.1
UniGene:Ssc.27182 Ensembl:ENSSSCT00000015007 GeneID:100522788
KEGG:ssc:100522788 Uniprot:F1SDY1
Length = 507
Score = 140 (54.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P KYW+P W +N+ +ARRE I + ++ +L E++ R + G L YD +++PLVY
Sbjct: 177 PYNKYWVPCVWFSNLAAQARREGRIRDNGALKLLLEELNVFRGKCGMLFHYDWISVPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|E1BF90 [details] [associations]
symbol:BEST3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043271 "negative regulation of ion transport"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
GO:GO:0043271 GO:GO:0005254 GeneTree:ENSGT00390000002997
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 OMA:LSTIRET EMBL:DAAA02013226 EMBL:DAAA02013227
IPI:IPI00701713 Ensembl:ENSBTAT00000003810 Uniprot:E1BF90
Length = 665
Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P KYW+P W N+ +AR+E I +Q+++ EM+ R L GYD V +PL
Sbjct: 175 KSPHLKYWVPFIWFGNLAAKARKEGRIRDSVDLQSLMTEMNRFRSWCSLLFGYDWVGIPL 234
Query: 64 VYTQ 67
VYTQ
Sbjct: 235 VYTQ 238
>UNIPROTKB|F1SH43 [details] [associations]
symbol:BEST3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043271 "negative regulation of ion transport"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
GO:GO:0043271 GO:GO:0005254 GeneTree:ENSGT00390000002997
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 OMA:LSTIRET EMBL:CU442731 Ensembl:ENSSSCT00000000538
Uniprot:F1SH43
Length = 666
Score = 137 (53.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P KYW+P W N+ +AR+E I +Q+++ EM+ R L GYD V +PL
Sbjct: 177 KSPHLKYWVPFIWFGNLAAKARKEGRIRDSVDLQSLMTEMNRFRSWCSLLFGYDWVGIPL 236
Query: 64 VYTQ 67
VYTQ
Sbjct: 237 VYTQ 240
>UNIPROTKB|F8VVZ2 [details] [associations]
symbol:BEST3 "Bestrophin-3" species:9606 "Homo sapiens"
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0043271
"negative regulation of ion transport" evidence=IEA] GO:GO:0043271
GO:GO:0005254 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 HGNC:HGNC:17105 EMBL:AC018921
EMBL:AC025263 EMBL:AC016153 IPI:IPI01022704 Ensembl:ENST00000553096
ArrayExpress:F8VVZ2 Bgee:F8VVZ2 Uniprot:F8VVZ2
Length = 562
Score = 136 (52.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P KYW+P W N+ +AR E I +Q+++ EM+ R L GYD V +PL
Sbjct: 69 KSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPL 128
Query: 64 VYTQ 67
VYTQ
Sbjct: 129 VYTQ 132
>UNIPROTKB|E2RSZ4 [details] [associations]
symbol:BEST2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051899 "membrane depolarization"
evidence=IEA] [GO:0007608 "sensory perception of smell"
evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] GO:GO:0005929
GO:GO:0051899 GO:GO:0007608 GO:GO:0005254
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 KO:K13879 OMA:FSNLAAQ
EMBL:AAEX03012406 RefSeq:XP_003639774.1 Ensembl:ENSCAFT00000027237
GeneID:100856525 KEGG:cfa:100856525 Uniprot:E2RSZ4
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P W +N+ +ARRE I + ++ +L E++ R + G L YD +++PLVYTQ
Sbjct: 180 KYWVPCVWFSNLAAQARREGRIRDNSALKLLLEELNVFRGKCGMLFHYDWISVPLVYTQ 238
>UNIPROTKB|Q8NFU1 [details] [associations]
symbol:BEST2 "Bestrophin-2" species:9606 "Homo sapiens"
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005254 "chloride channel activity" evidence=ISS] [GO:0005929
"cilium" evidence=ISS] [GO:0007608 "sensory perception of smell"
evidence=ISS] [GO:0051899 "membrane depolarization" evidence=ISS]
GO:GO:0005886 GO:GO:0005929 GO:GO:0051899 GO:GO:0007608
GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000115678 InterPro:IPR000615
InterPro:IPR021134 PANTHER:PTHR10736 Pfam:PF01062 eggNOG:NOG315004
HOVERGEN:HBG044928 EMBL:AF440756 EMBL:AY515705 EMBL:AK000139
IPI:IPI00171687 RefSeq:NP_060152.2 UniGene:Hs.435611
ProteinModelPortal:Q8NFU1 STRING:Q8NFU1 TCDB:1.A.46.1.2
PhosphoSite:Q8NFU1 DMDM:38503353 PaxDb:Q8NFU1 PRIDE:Q8NFU1
Ensembl:ENST00000042931 Ensembl:ENST00000549706
Ensembl:ENST00000553030 GeneID:54831 KEGG:hsa:54831 UCSC:uc002mux.3
CTD:54831 GeneCards:GC19P012864 HGNC:HGNC:17107 HPA:HPA046229
MIM:607335 neXtProt:NX_Q8NFU1 PharmGKB:PA162377481
InParanoid:Q8NFU1 KO:K13879 OMA:FSNLAAQ OrthoDB:EOG4K3KW9
PhylomeDB:Q8NFU1 GenomeRNAi:54831 NextBio:57612 Bgee:Q8NFU1
CleanEx:HS_BEST2 Genevestigator:Q8NFU1 GermOnline:ENSG00000039987
Uniprot:Q8NFU1
Length = 509
Score = 135 (52.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P W +N+ +ARRE I + ++ +L E++ R + G L YD +++PLVYTQ
Sbjct: 180 KYWVPCVWFSNLAAQARREGRIRDNSALKLLLEELNVFRGKCGMLFHYDWISVPLVYTQ 238
>UNIPROTKB|Q8N1M1 [details] [associations]
symbol:BEST3 "Bestrophin-3" species:9606 "Homo sapiens"
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IEA] [GO:0043271 "negative
regulation of ion transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
GO:GO:0005886 GO:GO:0043271 GO:GO:0034707 GO:GO:0005254
HOGENOM:HOG000115678 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 eggNOG:NOG315004 EMBL:AF440758
EMBL:AY515706 EMBL:AK096459 EMBL:BC006440 IPI:IPI00013763
IPI:IPI00166196 IPI:IPI00168901 RefSeq:NP_116124.2
UniGene:Hs.280782 ProteinModelPortal:Q8N1M1 STRING:Q8N1M1
PhosphoSite:Q8N1M1 DMDM:38503351 PRIDE:Q8N1M1 DNASU:144453
Ensembl:ENST00000266661 Ensembl:ENST00000330891
Ensembl:ENST00000331471 Ensembl:ENST00000393365
Ensembl:ENST00000551160 GeneID:144453 KEGG:hsa:144453
UCSC:uc001svd.2 UCSC:uc001svg.3 CTD:144453 GeneCards:GC12M070037
H-InvDB:HIX0010809 HGNC:HGNC:17105 MIM:607337 neXtProt:NX_Q8N1M1
PharmGKB:PA162377503 HOVERGEN:HBG080894 InParanoid:Q8N1M1 KO:K13880
OMA:LSTIRET OrthoDB:EOG4Q84X2 PhylomeDB:Q8N1M1 GenomeRNAi:144453
NextBio:84929 ArrayExpress:Q8N1M1 Bgee:Q8N1M1 CleanEx:HS_BEST3
Genevestigator:Q8N1M1 GermOnline:ENSG00000127325 Uniprot:Q8N1M1
Length = 668
Score = 136 (52.9 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P KYW+P W N+ +AR E I +Q+++ EM+ R L GYD V +PL
Sbjct: 175 KSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPL 234
Query: 64 VYTQ 67
VYTQ
Sbjct: 235 VYTQ 238
>MGI|MGI:3580298 [details] [associations]
symbol:Best3 "bestrophin 3" species:10090 "Mus musculus"
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=IDA] [GO:0015698 "inorganic anion transport"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0034220 "ion transmembrane
transport" evidence=IDA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0043271 "negative regulation of ion transport"
evidence=IDA] MGI:MGI:3580298 GO:GO:0005886 GO:GO:0043271
GO:GO:0034707 GO:GO:0005254 GeneTree:ENSGT00390000002997
HOGENOM:HOG000115678 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 eggNOG:NOG315004 CTD:144453
HOVERGEN:HBG080894 KO:K13880 OMA:LSTIRET OrthoDB:EOG4Q84X2
EMBL:AY450426 IPI:IPI00454090 RefSeq:NP_001007584.1
UniGene:Mm.339322 ProteinModelPortal:Q6H1V1 STRING:Q6H1V1
TCDB:1.A.46.1.4 PhosphoSite:Q6H1V1 PRIDE:Q6H1V1 DNASU:382427
Ensembl:ENSMUST00000020378 GeneID:382427 KEGG:mmu:382427
UCSC:uc007hcp.1 InParanoid:Q6H1V1 NextBio:403295 Bgee:Q6H1V1
CleanEx:MM_BEST3 Genevestigator:Q6H1V1 Uniprot:Q6H1V1
Length = 669
Score = 136 (52.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P KYW+P W N+ +AR E I +Q+++ EM+ R L GYD V +PL
Sbjct: 175 KSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPL 234
Query: 64 VYTQ 67
VYTQ
Sbjct: 235 VYTQ 238
>RGD|1305439 [details] [associations]
symbol:Best3 "bestrophin 3" species:10116 "Rattus norvegicus"
[GO:0005254 "chloride channel activity" evidence=IEA;ISO]
[GO:0006821 "chloride transport" evidence=ISO] [GO:0015698
"inorganic anion transport" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0043271 "negative
regulation of ion transport" evidence=IEA;ISO] RGD:1305439
GO:GO:0043271 GO:GO:0005254 GeneTree:ENSGT00390000002997
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 CTD:144453 KO:K13880 OMA:LSTIRET OrthoDB:EOG4Q84X2
IPI:IPI00360211 RefSeq:NP_001178712.1 UniGene:Rn.162940
Ensembl:ENSRNOT00000007309 GeneID:314847 KEGG:rno:314847
UCSC:RGD:1305439 NextBio:668288 Uniprot:D4AAW7
Length = 672
Score = 136 (52.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P KYW+P W N+ +AR E I +Q+++ EM+ R L GYD V +PL
Sbjct: 175 KSPHLKYWVPFIWFGNLATKARNEGRIRDSVDLQSLMTEMNRYRSWCSLLFGYDWVGIPL 234
Query: 64 VYTQ 67
VYTQ
Sbjct: 235 VYTQ 238
>UNIPROTKB|E1C426 [details] [associations]
symbol:BEST4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005254 "chloride channel activity" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0007608 "sensory perception
of smell" evidence=IEA] [GO:0051899 "membrane depolarization"
evidence=IEA] GO:GO:0005929 GO:GO:0051899 GO:GO:0005254
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 EMBL:AADN02012689 IPI:IPI00813789
Ensembl:ENSGALT00000016468 OMA:LIVNRWW Uniprot:E1C426
Length = 374
Score = 132 (51.5 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P W TN+ +ARR+ I D ++ +++E++ R + L YD +++PLVYTQ
Sbjct: 180 KYWIPCVWFTNLAAQARRDGRIRDDVALRLLMDELNLFRAKCSMLFHYDWISIPLVYTQ 238
>UNIPROTKB|Q8NFU0 [details] [associations]
symbol:BEST4 "Bestrophin-4" species:9606 "Homo sapiens"
[GO:0005254 "chloride channel activity" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
GO:GO:0005886 GO:GO:0034707 GO:GO:0005254 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 HOVERGEN:HBG044928 OrthoDB:EOG4K3KW9
EMBL:AF440757 EMBL:AY515707 EMBL:AL592166 EMBL:BC101823
IPI:IPI00168902 RefSeq:NP_695006.1 UniGene:Hs.302513
ProteinModelPortal:Q8NFU0 STRING:Q8NFU0 DMDM:38503352 PRIDE:Q8NFU0
Ensembl:ENST00000372207 GeneID:266675 KEGG:hsa:266675
UCSC:uc001cmm.3 CTD:266675 GeneCards:GC01M045249 HGNC:HGNC:17106
MIM:607336 neXtProt:NX_Q8NFU0 PharmGKB:PA162377520
InParanoid:Q8NFU0 KO:K13881 OMA:VEEHMAK PhylomeDB:Q8NFU0
GenomeRNAi:266675 NextBio:93293 Bgee:Q8NFU0 CleanEx:HS_BEST4
Genevestigator:Q8NFU0 GermOnline:ENSG00000142959 Uniprot:Q8NFU0
Length = 473
Score = 133 (51.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K KYW+P W TN+ +ARR+ I D + +L E++ R + L YD +++PL
Sbjct: 175 KSDFNKYWVPCVWFTNLAAQARRDGRIRDDIALCLLLEELNKYRAKCSMLFHYDWISIPL 234
Query: 64 VYTQ 67
VYTQ
Sbjct: 235 VYTQ 238
>MGI|MGI:2387588 [details] [associations]
symbol:Best2 "bestrophin 2" species:10090 "Mus musculus"
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005929 "cilium" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006821 "chloride transport" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0034707 "chloride channel complex"
evidence=IEA] [GO:0051899 "membrane depolarization" evidence=IDA]
MGI:MGI:2387588 GO:GO:0005886 GO:GO:0005929 GO:GO:0051899
GO:GO:0007608 GO:GO:0034707 GO:GO:0005254
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 HOVERGEN:HBG044928 CTD:54831
KO:K13879 OrthoDB:EOG4K3KW9 EMBL:AY450428 EMBL:BC019528
EMBL:BC031186 EMBL:BC036157 EMBL:BC036163 IPI:IPI00221643
RefSeq:NP_001123666.1 UniGene:Mm.215154 STRING:Q8BGM5
PhosphoSite:Q8BGM5 PRIDE:Q8BGM5 Ensembl:ENSMUST00000059072
GeneID:212989 KEGG:mmu:212989 UCSC:uc009mov.1 InParanoid:Q8BGM5
NextBio:373786 Bgee:Q8BGM5 CleanEx:MM_BEST2 Genevestigator:Q8BGM5
GermOnline:ENSMUSG00000052819 Uniprot:Q8BGM5
Length = 508
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P W +++ +ARRE I + ++ +L E++ R + G L YD +++PLVYTQ
Sbjct: 180 KYWVPCVWFSSLAAQARREGRIRDNSALKLLLEELNVFRSKCGMLFHYDWISIPLVYTQ 238
>RGD|1305377 [details] [associations]
symbol:Best2 "bestrophin 2" species:10116 "Rattus norvegicus"
[GO:0005254 "chloride channel activity" evidence=ISO] [GO:0005929
"cilium" evidence=ISO] [GO:0006821 "chloride transport"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
RGD:1305377 GO:GO:0005929 GO:GO:0051899 GO:GO:0007608 GO:GO:0005254
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 OrthoDB:EOG4K3KW9 IPI:IPI00947899
Ensembl:ENSRNOT00000067600 ArrayExpress:D4A3A7 Uniprot:D4A3A7
Length = 508
Score = 130 (50.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P W +++ +ARRE I + ++ +L E++ R + G L YD +++PLVYTQ
Sbjct: 180 KYWVPCVWFSSLAAQARREGRIRDNSALKLLLEELNVFRSKCGMLFHYDWISIPLVYTQ 238
>UNIPROTKB|E1BF86 [details] [associations]
symbol:BEST2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051899 "membrane depolarization" evidence=IEA]
[GO:0007608 "sensory perception of smell" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] GO:GO:0005929 GO:GO:0051899 GO:GO:0007608
GO:GO:0005254 GeneTree:ENSGT00390000002997 InterPro:IPR000615
InterPro:IPR021134 PANTHER:PTHR10736 Pfam:PF01062 CTD:54831
KO:K13879 OMA:FSNLAAQ EMBL:DAAA02019386 IPI:IPI01001408
RefSeq:XP_002688807.1 RefSeq:XP_607911.4 Ensembl:ENSBTAT00000003818
GeneID:529463 KEGG:bta:529463 NextBio:20875039 Uniprot:E1BF86
Length = 512
Score = 129 (50.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P W N+ +ARRE I + + +L E++ R + G L YD +++PLVYTQ
Sbjct: 180 KYWVPCVWFCNLAAQARREGRIRDNGAFKLLLEELNVFRSKCGMLFHYDWISVPLVYTQ 238
>UNIPROTKB|A1A4I7 [details] [associations]
symbol:BEST1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0050908 "detection of light stimulus involved in
visual perception" evidence=IEA] [GO:0030321 "transepithelial
chloride transport" evidence=IEA] [GO:0016323 "basolateral plasma
membrane" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] GO:GO:0016323 GO:GO:0051924 GO:GO:0005254
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 CTD:7439 eggNOG:NOG315004 HOVERGEN:HBG044928 KO:K13878
OMA:YHSAPQT OrthoDB:EOG44BB2B GO:GO:0050908 GO:GO:0030321
EMBL:DAAA02063477 EMBL:BC126544 IPI:IPI00718346
RefSeq:NP_001073714.1 UniGene:Bt.27469 STRING:A1A4I7
Ensembl:ENSBTAT00000046067 GeneID:508924 KEGG:bta:508924
InParanoid:A1A4I7 NextBio:20868739 Uniprot:A1A4I7
Length = 589
Score = 129 (50.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q++LNEM+ +R + G L YD +++PLVY
Sbjct: 177 PHNSFWMPWVWFANLSTKAWIGGRIRDPILLQSLLNEMNTLRTQCGQLYAYDWISIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|O76090 [details] [associations]
symbol:BEST1 "Bestrophin-1" species:9606 "Homo sapiens"
[GO:0034707 "chloride channel complex" evidence=IEA] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IEA] [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0016323 "basolateral plasma membrane"
evidence=IDA] [GO:0007601 "visual perception" evidence=TAS]
[GO:0016021 "integral to membrane" evidence=TAS] [GO:0016020
"membrane" evidence=TAS] [GO:0005254 "chloride channel activity"
evidence=IDA] [GO:0006821 "chloride transport" evidence=IDA]
[GO:0030321 "transepithelial chloride transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] GO:GO:0016021 GO:GO:0005829
GO:GO:0007601 EMBL:CH471076 GO:GO:0016323 GO:GO:0051924
Orphanet:791 GO:GO:0034707 GO:GO:0005254 InterPro:IPR000615
InterPro:IPR021134 PANTHER:PTHR10736 Pfam:PF01062 EMBL:AF073500
EMBL:AF073491 EMBL:AF073492 EMBL:AF073493 EMBL:AF073494
EMBL:AF073495 EMBL:AF073496 EMBL:AF073497 EMBL:AF073498
EMBL:AF073499 EMBL:AF057169 EMBL:AF057170 EMBL:AF073501
EMBL:AY515704 EMBL:BC015220 EMBL:BC041664 EMBL:AK289681
EMBL:AK295998 EMBL:AK301392 IPI:IPI00181929 IPI:IPI00549560
IPI:IPI00550794 RefSeq:NP_001132915.1 RefSeq:NP_004174.1
UniGene:Hs.524910 UniGene:Hs.712676 ProteinModelPortal:O76090
STRING:O76090 TCDB:1.A.46.1.1 PhosphoSite:O76090 PaxDb:O76090
PRIDE:O76090 Ensembl:ENST00000378042 Ensembl:ENST00000378043
Ensembl:ENST00000449131 Ensembl:ENST00000524926 GeneID:7439
KEGG:hsa:7439 UCSC:uc001nsr.2 UCSC:uc001nss.3 UCSC:uc001nst.3
CTD:7439 GeneCards:GC11P061717 H-InvDB:HIX0036211 HGNC:HGNC:12703
MIM:153700 MIM:193220 MIM:607854 MIM:608161 MIM:611809 MIM:613194
neXtProt:NX_O76090 Orphanet:99000 Orphanet:3086 Orphanet:1243
Orphanet:263347 Orphanet:139455 PharmGKB:PA162377454
eggNOG:NOG315004 HOVERGEN:HBG044928 InParanoid:O76090 KO:K13878
OMA:YHSAPQT OrthoDB:EOG44BB2B PhylomeDB:O76090 ChiTaRS:BEST1
GenomeRNAi:7439 NextBio:29132 ArrayExpress:O76090 Bgee:O76090
CleanEx:HS_BEST1 Genevestigator:O76090 GermOnline:ENSG00000167995
GO:GO:0050908 GO:GO:0030321 Uniprot:O76090
Length = 585
Score = 125 (49.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q++LNEM+ +R + G L YD +++PLVY
Sbjct: 177 PHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|Q6UY87 [details] [associations]
symbol:BEST1 "Bestrophin-1" species:9541 "Macaca
fascicularis" [GO:0016323 "basolateral plasma membrane"
evidence=ISS] GO:GO:0016323 GO:GO:0050896 GO:GO:0034707
GO:GO:0005254 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 HOVERGEN:HBG044928 EMBL:AY357936
EMBL:AY357927 EMBL:AY357928 EMBL:AY357929 EMBL:AY357931
EMBL:AY357933 EMBL:AY357935 EMBL:AY357934 EMBL:AY357932
EMBL:AY357930 EMBL:AY357925 EMBL:AB179420 Uniprot:Q6UY87
Length = 585
Score = 125 (49.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q++LNEM+ +R + G L YD +++PLVY
Sbjct: 177 PHNMFWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|Q8WMR7 [details] [associations]
symbol:BEST1 "Bestrophin-1" species:9823 "Sus scrofa"
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0005254 "chloride
channel activity" evidence=IEA] GO:GO:0016323 GO:GO:0034707
GO:GO:0005254 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 HOVERGEN:HBG044928 EMBL:AY064707
UniGene:Ssc.15771 Uniprot:Q8WMR7
Length = 428
Score = 122 (48.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q++L+EM+ +R + G L YD +++PLVY
Sbjct: 24 PHNSFWMPWVWFANLSTKAWIGGRIRDPVLLQSLLDEMNTLRTQCGHLYAYDWISVPLVY 83
Query: 66 TQ 67
TQ
Sbjct: 84 TQ 85
>RGD|1311656 [details] [associations]
symbol:Best1 "bestrophin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005254 "chloride
channel activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0006821 "chloride transport"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016323 "basolateral plasma membrane" evidence=IEA;ISO]
[GO:0030321 "transepithelial chloride transport" evidence=IEA;ISO]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IEA;ISO] [GO:0051924 "regulation of calcium
ion transport" evidence=IEA;ISO] RGD:1311656 GO:GO:0016323
GO:GO:0051924 GO:GO:0005254 GeneTree:ENSGT00390000002997
HOGENOM:HOG000115678 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 CTD:7439 eggNOG:NOG315004
HOVERGEN:HBG044928 KO:K13878 OMA:YHSAPQT OrthoDB:EOG44BB2B
GO:GO:0050908 GO:GO:0030321 EMBL:BC079048 IPI:IPI00464708
RefSeq:NP_001011940.1 UniGene:Rn.136565 STRING:Q6AYG9
Ensembl:ENSRNOT00000007320 GeneID:293735 KEGG:rno:293735
InParanoid:Q6AYG9 NextBio:636877 Genevestigator:Q6AYG9
Uniprot:Q6AYG9
Length = 550
Score = 123 (48.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q+++NE+ +R + G L YD +N+PLVY
Sbjct: 177 PHNTFWVPWVWFANLSMKAYLGGRIRDTVLLQSLMNEVCTLRTQCGHLYAYDWINIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>WB|WBGene00013921 [details] [associations]
symbol:best-22 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 OMA:VEEHMAK EMBL:Z68753 PIR:T27630 RefSeq:NP_502353.1
PRIDE:Q23369 EnsemblMetazoa:ZC518.1a GeneID:191197
KEGG:cel:CELE_ZC518.1 UCSC:ZC518.1a CTD:191197 WormBase:ZC518.1a
eggNOG:NOG283139 InParanoid:Q23369 NextBio:948302
ArrayExpress:Q23369 Uniprot:Q23369
Length = 499
Score = 122 (48.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K P ++YW + W+ N++ +++ + S +++ I++E+ R L SL+ YD V +PL
Sbjct: 176 KDPYSRYWTSIQWSLNLVYECQKKGKVDSYYLMNKIVDEIGKFRHGLASLLKYDWVPVPL 235
Query: 64 VYTQ 67
VY Q
Sbjct: 236 VYPQ 239
>WB|WBGene00015288 [details] [associations]
symbol:best-4 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 eggNOG:NOG315004 EMBL:FO080084
PIR:T32367 RefSeq:NP_493631.1 UniGene:Cel.16017
ProteinModelPortal:O17205 PaxDb:O17205 EnsemblMetazoa:C01B12.5
GeneID:182063 KEGG:cel:CELE_C01B12.5 UCSC:C01B12.5 CTD:182063
WormBase:C01B12.5 HOGENOM:HOG000018203 InParanoid:O17205
NextBio:916246 Uniprot:O17205
Length = 557
Score = 122 (48.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 20/62 (32%), Positives = 39/62 (62%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +KYW P+ W +++ A+ E I ++ ++++M + R ++ +L+ +D V +PLVY
Sbjct: 177 PQSKYWQPIQWLFSLVTVAKDEGLIADSYLYVDLIDKMREFRTKILNLVIFDMVPIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|I3LNI9 [details] [associations]
symbol:BEST1 "Bestrophin-1" species:9823 "Sus scrofa"
[GO:0051924 "regulation of calcium ion transport" evidence=IEA]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IEA] [GO:0030321 "transepithelial chloride
transport" evidence=IEA] [GO:0016323 "basolateral plasma membrane"
evidence=IEA] [GO:0005254 "chloride channel activity" evidence=IEA]
GO:GO:0016323 GO:GO:0051924 GO:GO:0005254
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 OMA:YHSAPQT GO:GO:0050908
GO:GO:0030321 EMBL:FP312689 Ensembl:ENSSSCT00000023752
Uniprot:I3LNI9
Length = 585
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q++L+EM+ +R + G L YD +++PLVY
Sbjct: 177 PHNSFWMPWVWFANLSTKAWIGGRIRDPVLLQSLLDEMNTLRTQCGHLYAYDWISVPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>WB|WBGene00206487 [details] [associations]
symbol:best-19 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] eggNOG:COG4886
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 EMBL:FO081576 RefSeq:NP_001255219.1
ProteinModelPortal:O16779 STRING:O16779 PaxDb:O16779
EnsemblMetazoa:T21D12.15 GeneID:13191891 KEGG:cel:CELE_T21D12.15
UCSC:T21D12.9c.1 CTD:13191891 WormBase:T21D12.15 OMA:FMLESER
NextBio:894278 ArrayExpress:O16779 Uniprot:O16779
Length = 569
Score = 120 (47.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 4 KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPL 63
K+P KY+LP+ W +++ AR + I +D M+ ++ + D R LG L+ +D V +PL
Sbjct: 180 KYP--KYFLPIQWCFSLLYDARAQGKIGADVMLNELIKSVGDFRKGLGQLLNFDWVPIPL 237
Query: 64 VYTQ 67
VY Q
Sbjct: 238 VYPQ 241
>MGI|MGI:1346332 [details] [associations]
symbol:Best1 "bestrophin 1" species:10090 "Mus musculus"
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005254
"chloride channel activity" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0006821 "chloride
transport" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=ISO] [GO:0030321
"transepithelial chloride transport" evidence=ISO] [GO:0034707
"chloride channel complex" evidence=IEA] [GO:0050908 "detection of
light stimulus involved in visual perception" evidence=IMP]
[GO:0051924 "regulation of calcium ion transport" evidence=IMP]
MGI:MGI:1346332 GO:GO:0016323 GO:GO:0051924 GO:GO:0034707
GO:GO:0005254 GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 CTD:7439 eggNOG:NOG315004 HOVERGEN:HBG044928 KO:K13878
OMA:YHSAPQT OrthoDB:EOG44BB2B GO:GO:0050908 GO:GO:0030321
EMBL:AY450427 EMBL:BC139060 EMBL:BC139061 EMBL:AF057171
IPI:IPI00454089 RefSeq:NP_036043.2 UniGene:Mm.31577
ProteinModelPortal:O88870 STRING:O88870 PhosphoSite:O88870
PRIDE:O88870 Ensembl:ENSMUST00000117346 GeneID:24115 KEGG:mmu:24115
InParanoid:B2RSY6 NextBio:304147 Bgee:O88870 CleanEx:MM_BEST1
Genevestigator:O88870 GermOnline:ENSMUSG00000037418 Uniprot:O88870
Length = 551
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q+++NE+ +R + G L YD +++PLVY
Sbjct: 177 PHNTFWVPWVWFANLSMKAYLGGRIRDTVLLQSLMNEVCTLRTQCGQLYAYDWISIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>UNIPROTKB|A5H7G8 [details] [associations]
symbol:VMD2 "Bestrophin" species:9615 "Canis lupus
familiaris" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0050908 "detection of light stimulus involved in
visual perception" evidence=IEA] [GO:0030321 "transepithelial
chloride transport" evidence=IEA] [GO:0016323 "basolateral plasma
membrane" evidence=IEA] [GO:0005254 "chloride channel activity"
evidence=IEA] GO:GO:0016323 GO:GO:0051924 GO:GO:0005254
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 CTD:7439 eggNOG:NOG315004 HOVERGEN:HBG044928 KO:K13878
OMA:YHSAPQT OrthoDB:EOG44BB2B GO:GO:0050908 GO:GO:0030321
EMBL:AAEX03011667 EMBL:EF110978 RefSeq:NP_001091014.1
UniGene:Cfa.46597 Ensembl:ENSCAFT00000025216 GeneID:483791
KEGG:cfa:483791 InParanoid:A5H7G8 NextBio:20858144 Uniprot:A5H7G8
Length = 580
Score = 118 (46.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P +W+P W N+ +A I ++Q++L+EM+ +R + G L YD +++PLVY
Sbjct: 177 PHNTFWVPWVWFANLSMKAWIGGRIRDPVLLQSLLDEMNILRTQCGHLFAYDWISIPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>WB|WBGene00015286 [details] [associations]
symbol:best-3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 eggNOG:NOG315004 EMBL:FO080084
HOGENOM:HOG000018203 PIR:T32368 RefSeq:NP_493632.1
ProteinModelPortal:O17206 EnsemblMetazoa:C01B12.3 GeneID:173379
KEGG:cel:CELE_C01B12.3 UCSC:C01B12.3 CTD:173379 WormBase:C01B12.3
InParanoid:O17206 OMA:SEMFRRM NextBio:879403 Uniprot:O17206
Length = 612
Score = 117 (46.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P KYW P+ W ++I AR E I+SD + ++ +M R + SL +D V +PLVY
Sbjct: 177 PHAKYWQPMHWLFSMITLARDEGMISSDIIYVDLMEKMRQFRVNILSLTLFDWVPVPLVY 236
Query: 66 TQ 67
TQ
Sbjct: 237 TQ 238
>WB|WBGene00007808 [details] [associations]
symbol:best-7 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:Z68335 PIR:T19565
RefSeq:NP_502108.2 EnsemblMetazoa:C29F4.2 GeneID:178030
KEGG:cel:CELE_C29F4.2 UCSC:C29F4.2 CTD:178030 WormBase:C29F4.2
InParanoid:Q18303 OMA:RVNISNK NextBio:899432 Uniprot:Q18303
Length = 540
Score = 114 (45.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYWL W N++N ARRE I S + I E+ R L + YD V +PL+Y Q
Sbjct: 180 KYWLGFNWTFNLLNEARREGRIESAYTQNAIAEEIRTFRSGLSLIWTYDWVPIPLMYPQ 238
>WB|WBGene00022797 [details] [associations]
symbol:best-24 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] GO:GO:0040011
GO:GO:0040018 GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:FO080277 PIR:S44917
RefSeq:NP_498717.1 ProteinModelPortal:P34672 MINT:MINT-3384533
PaxDb:P34672 EnsemblMetazoa:ZK688.2 GeneID:176110
KEGG:cel:CELE_ZK688.2 UCSC:ZK688.2 CTD:176110 WormBase:ZK688.2
InParanoid:P34672 OMA:RYCELAQ NextBio:891154 Uniprot:P34672
Length = 632
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 2 DE-KHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVN 60
DE ++ +KYW+P WA ++ AR++ I SD+ + +E+ R L + YD V
Sbjct: 172 DEIQYKYSKYWVPFQWAFSLTYEARKKGLIESDYYQVVVQDEIKKFRTGLAWICNYDWVP 231
Query: 61 LPLVYTQ 67
+P++Y Q
Sbjct: 232 IPIMYPQ 238
>WB|WBGene00007404 [details] [associations]
symbol:best-5 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] GO:GO:0016021
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 EMBL:Z29094 PIR:S40708 RefSeq:NP_499142.2
ProteinModelPortal:P34319 STRING:P34319 PaxDb:P34319
EnsemblMetazoa:C07A9.8 GeneID:176367 KEGG:cel:CELE_C07A9.8
UCSC:C07A9.8 CTD:176367 WormBase:C07A9.8 eggNOG:NOG239278
InParanoid:P34319 OMA:HELEKFN NextBio:892270 Uniprot:P34319
Length = 453
Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+ WA ++N A+ E +I D+ I E+S R L ++ YD V +PL+Y Q
Sbjct: 223 KYWVSFNWALELLNVAKTEKSIDGDNARNAIAQEISKFRSALTTVSMYDWVPIPLMYPQ 281
>WB|WBGene00007203 [details] [associations]
symbol:best-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:Z73422 PIR:T18781
RefSeq:NP_502523.1 STRING:Q17528 EnsemblMetazoa:B0564.3.1
EnsemblMetazoa:B0564.3.2 GeneID:178264 KEGG:cel:CELE_B0564.3
UCSC:B0564.3.1 CTD:178264 WormBase:B0564.3 InParanoid:Q17528
OMA:NIMRYCE NextBio:900418 Uniprot:Q17528
Length = 450
Score = 106 (42.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 8 TKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
TKYW+P WA + +AR++ I SD+ + E+ R + + YD V LPL+Y Q
Sbjct: 184 TKYWIPANWALCMTYKARKDGYIESDYFKAQMEGEIRTWRTNIEWVCNYDWVPLPLMYPQ 243
>WB|WBGene00011868 [details] [associations]
symbol:best-18 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:Z30423 PIR:S42371
RefSeq:NP_001255067.1 PaxDb:P34577 EnsemblMetazoa:T20G5.4a
GeneID:176436 KEGG:cel:CELE_T20G5.4 UCSC:T20G5.4 CTD:176436
WormBase:T20G5.4 InParanoid:P34577 OMA:FIDNIAC NextBio:892572
Uniprot:P34577
Length = 456
Score = 106 (42.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
KY+LP WA ++ AR+E I D+ V I ++ R L + YD V LP++Y
Sbjct: 180 KYFLPFNWAWALVYNARKEGLIEGDYYVTVISEDIKKFRTGLAWVCNYDWVPLPIIY 236
>WB|WBGene00014989 [details] [associations]
symbol:best-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:Z46812 RefSeq:NP_001122668.1
EnsemblMetazoa:ZK675.3a GeneID:6418643 KEGG:cel:CELE_ZK675.3
UCSC:ZK675.3a CTD:6418643 WormBase:ZK675.3a InParanoid:A5JYR2
OMA:YTNRVAD NextBio:20901697 Uniprot:A5JYR2
Length = 405
Score = 102 (41.0 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 6 PMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVY 65
P K+W+PL W ++ R + T+T + ++ +L+ + R L YD + +PLVY
Sbjct: 172 PHQKWWVPLNWIQTMMVRCFEKGTLTHTNELRVLLDALEKYRNGFFQLFIYDWIAIPLVY 231
Query: 66 TQ 67
TQ
Sbjct: 232 TQ 233
>WB|WBGene00007204 [details] [associations]
symbol:best-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] GO:GO:0016021
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:Z73422 PIR:T18782
RefSeq:NP_502524.2 EnsemblMetazoa:B0564.4 GeneID:182044
KEGG:cel:CELE_B0564.4 UCSC:B0564.4 CTD:182044 WormBase:B0564.4
OMA:MRARKEN Uniprot:Q17529
Length = 421
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P WA + +AR++ I SD+ + E+ R + + YD V LPL+Y Q
Sbjct: 185 KYWIPANWALCMTYKARKDGYIESDYFKAQMEGEIRTWRTNIEWVCNYDWVPLPLMYPQ 243
>UNIPROTKB|Q17529 [details] [associations]
symbol:B0564.4 "Uncharacterized protein B0564.4"
species:6239 "Caenorhabditis elegans" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GO:GO:0016021 GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 eggNOG:NOG315004 EMBL:Z73422 PIR:T18782
RefSeq:NP_502524.2 EnsemblMetazoa:B0564.4 GeneID:182044
KEGG:cel:CELE_B0564.4 UCSC:B0564.4 CTD:182044 WormBase:B0564.4
OMA:MRARKEN Uniprot:Q17529
Length = 421
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P WA + +AR++ I SD+ + E+ R + + YD V LPL+Y Q
Sbjct: 185 KYWIPANWALCMTYKARKDGYIESDYFKAQMEGEIRTWRTNIEWVCNYDWVPLPLMYPQ 243
>WB|WBGene00011258 [details] [associations]
symbol:best-15 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:AY515708
EMBL:Z73105 PIR:T24210 RefSeq:NP_502007.2 UniGene:Cel.12470
ProteinModelPortal:Q21973 TCDB:1.A.46.1.3 EnsemblMetazoa:R13.3
GeneID:177975 KEGG:cel:CELE_R13.3 UCSC:R13.3 CTD:177975
WormBase:R13.3 eggNOG:NOG277917 GeneTree:ENSGT00390000002997
HOGENOM:HOG000115678 InParanoid:Q21973 OMA:MSILQFI NextBio:899194
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 Uniprot:Q21973
Length = 525
Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 7 MTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYT 66
+ KY++P+ W+T ++ AR E I +D ++ I + + R L L YD V +PL Y
Sbjct: 181 LQKYFVPIQWSTGLLVDARAEGKIAADLLMNEIGKHIIEFRKMLALLSNYDWVPIPLAYP 240
Query: 67 Q 67
Q
Sbjct: 241 Q 241
>WB|WBGene00009340 [details] [associations]
symbol:best-14 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] GO:GO:0016021
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 EMBL:Z72509 PIR:H89192 PIR:T21670 RefSeq:NP_505708.2
PaxDb:Q19978 EnsemblMetazoa:F32G8.4.1 EnsemblMetazoa:F32G8.4.2
GeneID:179471 KEGG:cel:CELE_F32G8.4 UCSC:F32G8.4 CTD:179471
WormBase:F32G8.4 eggNOG:NOG326885 InParanoid:Q19978 OMA:IAYYIVL
NextBio:905538 Uniprot:Q19978
Length = 405
Score = 99 (39.9 bits), Expect = 0.00019, P = 0.00019
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 1 MDEKHPMTKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVN 60
M+ P K+++P+ W N+I + +++ I S M +L ++ R L YD +
Sbjct: 162 MNTDAPHGKWFIPILWIVNLIKKQKQKGIIDSIQM-DMLLKQVYSYRDGFAMLFVYDWIK 220
Query: 61 LPLVYTQ 67
+PLVYTQ
Sbjct: 221 IPLVYTQ 227
>WB|WBGene00007988 [details] [associations]
symbol:best-8 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] GO:GO:0019915 GeneTree:ENSGT00390000002997
HOGENOM:HOG000115678 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 EMBL:Z92828 eggNOG:NOG302626
PIR:T19806 RefSeq:NP_493472.1 ProteinModelPortal:O62095
EnsemblMetazoa:C37A5.1.1 EnsemblMetazoa:C37A5.1.2 GeneID:173285
KEGG:cel:CELE_C37A5.1 UCSC:C37A5.1.1 CTD:173285 WormBase:C37A5.1
InParanoid:O62095 OMA:ANIGFIE NextBio:879001 Uniprot:O62095
Length = 512
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 8 TKYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
T YW+P+ W++ I+ + + I + + ++ E+ R + +L YD V +P+ Y Q
Sbjct: 179 TNYWMPVNWSSAILQKLFEDGNIPAAPLFNSVWQEVKTFRSNMATLCNYDWVPIPIAYPQ 238
>WB|WBGene00013520 [details] [associations]
symbol:best-21 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 HOGENOM:HOG000115678
InterPro:IPR000615 InterPro:IPR021134 PANTHER:PTHR10736
Pfam:PF01062 EMBL:AL132862 RefSeq:NP_502846.2 PaxDb:Q9NA59
EnsemblMetazoa:Y73F8A.11 GeneID:190674 KEGG:cel:CELE_Y73F8A.11
UCSC:Y73F8A.11 CTD:190674 WormBase:Y73F8A.11 eggNOG:NOG267974
InParanoid:Q9NA59 OMA:TEDQQKF NextBio:946594 Uniprot:Q9NA59
Length = 395
Score = 97 (39.2 bits), Expect = 0.00031, P = 0.00031
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 9 KYWLPLTWATNIINRARREA-TITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYWLP WA ++++A E + S + ++L + + R + L YD V +P+ Y Q
Sbjct: 180 KYWLPTHWANQLVHKAMFETKNVDSVQSMNSVLMNIKEFRQSMEMLTKYDWVPIPIAYPQ 239
>WB|WBGene00021368 [details] [associations]
symbol:best-20 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA]
GeneTree:ENSGT00390000002997 InterPro:IPR000615 InterPro:IPR021134
PANTHER:PTHR10736 Pfam:PF01062 EMBL:FO081773 RefSeq:NP_500411.2
IntAct:Q965X4 EnsemblMetazoa:Y37E11AR.1 GeneID:189623
KEGG:cel:CELE_Y37E11AR.1 UCSC:Y37E11AR.1 CTD:189623
WormBase:Y37E11AR.1 eggNOG:NOG289348 HOGENOM:HOG000019253
InParanoid:Q965X4 OMA:IRVRRRF NextBio:943046 Uniprot:Q965X4
Length = 536
Score = 94 (38.1 bits), Expect = 0.00099, P = 0.00099
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 9 KYWLPLTWATNIINRARREATITSDHMVQTILNEMSDIRWRLGSLIGYDNVNLPLVYTQ 67
KYW+P+ WA ++ N+A + + S + +++ E+ R L ++ +D +P+ Y Q
Sbjct: 232 KYWVPINWAISLSNQANSKGYVISAPGMVSLIQEIKTFRNGLATICNFDWCPIPIAYPQ 290
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 68 68 0.00091 102 3 11 22 0.44 28
29 0.38 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 530 (56 KB)
Total size of DFA: 106 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.61u 0.06s 7.67t Elapsed: 00:00:11
Total cpu time: 7.61u 0.06s 7.67t Elapsed: 00:00:12
Start: Thu Aug 15 12:27:10 2013 End: Thu Aug 15 12:27:22 2013