Query psy2166
Match_columns 805
No_of_seqs 292 out of 2891
Neff 10.5
Searched_HMMs 29240
Date Fri Aug 16 18:01:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2166.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2166hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 2.2E-74 7.4E-79 653.6 79.0 546 63-785 3-569 (570)
2 1e07_A Carcinoembryonic antige 100.0 5.8E-63 2E-67 570.3 58.4 531 36-787 70-641 (642)
3 3b43_A Titin; I-SET IG fold, e 100.0 3.3E-62 1.1E-66 553.7 62.3 500 13-662 21-569 (570)
4 3dmk_A DOWN syndrome cell adhe 100.0 6.6E-62 2.3E-66 577.6 56.9 551 35-787 197-810 (816)
5 3dmk_A DOWN syndrome cell adhe 100.0 1.7E-58 5.8E-63 548.3 57.0 640 62-804 35-744 (816)
6 1e07_A Carcinoembryonic antige 100.0 4.2E-57 1.4E-61 521.4 61.6 520 75-804 8-589 (642)
7 3v2a_R Vascular endothelial gr 100.0 1E-59 3.5E-64 556.3 18.5 588 12-787 46-757 (772)
8 2ocw_A Polymeric-immunoglobuli 100.0 2E-48 7E-53 444.0 51.3 468 72-788 6-548 (585)
9 2ec8_A MAST/stem cell growth f 100.0 4.7E-50 1.6E-54 450.7 27.0 455 60-790 31-514 (524)
10 3qs9_E FL cytokine receptor; i 100.0 1.1E-47 3.7E-52 426.2 40.1 435 75-786 57-510 (527)
11 2rcj_C Light chain; immunoglob 100.0 7.6E-47 2.6E-51 424.5 45.4 467 72-774 6-512 (523)
12 3v2a_R Vascular endothelial gr 100.0 2.7E-50 9.3E-55 475.8 16.7 551 64-804 30-696 (772)
13 1z7z_I Intercellular adhesion 100.0 1.1E-45 3.9E-50 406.9 29.6 402 214-786 10-449 (450)
14 1z7z_I Intercellular adhesion 100.0 4.5E-43 1.5E-47 386.1 34.0 395 74-663 7-449 (450)
15 3kld_A Contactin 4, axcam, BIG 100.0 2.3E-43 7.8E-48 379.0 30.8 369 64-590 4-383 (384)
16 3kld_A Contactin 4, axcam, BIG 100.0 1.5E-43 5.2E-48 380.4 28.7 372 201-786 4-383 (384)
17 2ec8_A MAST/stem cell growth f 100.0 3.4E-44 1.2E-48 403.0 22.4 423 13-593 52-513 (524)
18 3laf_A Deleted in colorectal c 100.0 3.7E-42 1.2E-46 373.2 34.3 373 64-592 20-403 (403)
19 2ocw_A Polymeric-immunoglobuli 100.0 3.1E-41 1.1E-45 384.7 40.4 399 38-592 76-548 (585)
20 3qs7_E FL cytokine receptor; i 100.0 1.1E-41 3.7E-46 368.2 33.9 359 205-791 51-419 (423)
21 1cs6_A Axonin-1; neural cell a 100.0 9.7E-42 3.3E-46 366.9 29.2 365 64-590 3-382 (382)
22 1cs6_A Axonin-1; neural cell a 100.0 1.3E-41 4.4E-46 365.9 29.4 368 201-785 3-381 (382)
23 3laf_A Deleted in colorectal c 100.0 4.4E-41 1.5E-45 364.7 32.2 369 201-786 20-401 (403)
24 3qs7_E FL cytokine receptor; i 100.0 1.1E-40 3.6E-45 360.3 33.4 351 75-593 57-417 (423)
25 3p3y_A Neurofascin; IG domains 100.0 2.9E-41 1E-45 366.3 28.4 376 200-785 14-402 (404)
26 2v5m_A Dscam; neurobiology SPL 100.0 7.2E-41 2.5E-45 361.0 29.8 358 65-588 3-387 (388)
27 2rcj_C Light chain; immunoglob 100.0 3.5E-40 1.2E-44 370.2 36.5 399 37-579 70-513 (523)
28 3p3y_A Neurofascin; IG domains 100.0 7.5E-41 2.6E-45 363.1 30.1 375 61-590 12-403 (404)
29 2v5m_A Dscam; neurobiology SPL 100.0 3E-41 1E-45 363.9 26.5 365 201-784 2-387 (388)
30 3qs9_E FL cytokine receptor; i 100.0 4.3E-41 1.5E-45 373.2 27.6 410 12-593 63-513 (527)
31 1bih_A Hemolin; insect immunit 100.0 1.3E-40 4.3E-45 360.1 27.5 369 62-588 3-394 (395)
32 1bih_A Hemolin; insect immunit 100.0 1.1E-40 3.7E-45 360.6 26.4 377 201-784 5-394 (395)
33 2rik_A Titin; I-SET IG fold, p 100.0 3.2E-36 1.1E-40 309.5 42.2 281 63-397 3-283 (284)
34 2rik_A Titin; I-SET IG fold, p 100.0 4.6E-36 1.6E-40 308.3 40.5 280 201-589 4-283 (284)
35 1wio_A CD4, T-cell surface gly 100.0 3.8E-38 1.3E-42 335.9 17.3 318 75-589 3-362 (363)
36 1qgc_4 Protein (immunoglobulin 100.0 4.7E-37 1.6E-41 336.9 25.2 369 72-586 7-435 (438)
37 1qgc_4 Protein (immunoglobulin 100.0 2.7E-36 9.4E-41 330.8 27.6 370 214-783 12-436 (438)
38 1wio_A CD4, T-cell surface gly 100.0 2.3E-36 8E-41 322.1 17.8 334 214-785 5-362 (363)
39 1igt_B IGG2A intact antibody - 100.0 2.9E-34 1E-38 314.8 27.3 372 73-578 7-433 (444)
40 2y25_A Myomesin; structural pr 100.0 2.9E-34 9.8E-39 300.0 24.1 279 492-786 4-315 (317)
41 1hzh_H IGG, immunoglobulin hea 100.0 5.2E-34 1.8E-38 313.9 24.5 370 73-579 7-443 (457)
42 2yd9_A Receptor-type tyrosine- 100.0 9.4E-33 3.2E-37 286.5 29.8 285 62-401 3-294 (304)
43 2yd9_A Receptor-type tyrosine- 100.0 5.2E-33 1.8E-37 288.4 27.7 282 201-594 5-295 (304)
44 2y25_A Myomesin; structural pr 100.0 2E-33 6.7E-38 293.7 24.5 288 62-398 4-315 (317)
45 2wim_A N-CAM 2, NCAM2, neural 100.0 2.3E-32 8E-37 281.7 29.9 258 494-790 3-288 (291)
46 1igt_B IGG2A intact antibody - 100.0 1.3E-32 4.4E-37 301.7 27.7 384 214-773 11-432 (444)
47 1iga_A IGA1; immunoglobulin; N 100.0 1.7E-31 5.7E-36 295.2 36.3 370 72-579 7-443 (475)
48 2wim_A N-CAM 2, NCAM2, neural 100.0 1.3E-31 4.4E-36 276.1 29.4 277 64-400 3-286 (291)
49 1qz1_A Neural cell adhesion mo 100.0 1.6E-31 5.6E-36 275.3 30.0 275 202-590 2-290 (291)
50 1qz1_A Neural cell adhesion mo 100.0 4.7E-31 1.6E-35 271.9 30.8 277 65-398 2-290 (291)
51 2y23_A Myomesin; structural pr 100.0 2.4E-31 8.1E-36 277.2 28.7 283 75-396 10-310 (312)
52 2y23_A Myomesin; structural pr 100.0 1.8E-31 6E-36 278.2 25.8 290 214-589 12-311 (312)
53 1igy_B IGG1 intact antibody MA 100.0 9.9E-35 3.4E-39 317.4 1.2 372 73-579 6-424 (434)
54 1hzh_H IGG, immunoglobulin hea 100.0 2.4E-31 8.1E-36 292.7 26.8 381 214-775 11-443 (457)
55 1iga_A IGA1; immunoglobulin; N 100.0 2.6E-29 9E-34 277.6 38.4 384 214-775 12-443 (475)
56 1zvo_C Myeloma immunoglobulin 100.0 8.9E-29 3E-33 274.8 41.7 377 73-584 7-497 (512)
57 2o26_X MAST/stem cell growth f 100.0 1.5E-30 5E-35 268.0 21.8 250 493-788 10-290 (290)
58 4fqp_A Poliovirus receptor; im 100.0 2.4E-30 8.3E-35 269.5 22.9 249 505-790 9-308 (313)
59 1zvo_C Myeloma immunoglobulin 100.0 8.1E-28 2.8E-32 267.1 41.8 429 214-787 11-504 (512)
60 2o26_X MAST/stem cell growth f 100.0 7.7E-30 2.6E-34 262.6 23.0 268 201-592 11-290 (290)
61 1ry7_B FGFR-3, fibroblast grow 100.0 1.2E-31 4.2E-36 282.3 9.6 299 73-401 15-330 (334)
62 4dep_C Interleukin-1 receptor 100.0 2.8E-30 9.5E-35 273.7 19.9 265 498-791 9-338 (349)
63 1igy_B IGG1 intact antibody MA 100.0 3.3E-32 1.1E-36 297.3 4.3 378 214-775 10-424 (434)
64 4fqp_A Poliovirus receptor; im 100.0 2.6E-29 9E-34 261.6 25.4 276 70-401 4-307 (313)
65 1ry7_B FGFR-3, fibroblast grow 100.0 2.6E-31 9E-36 279.7 9.6 278 214-593 19-330 (334)
66 4dep_C Interleukin-1 receptor 100.0 1.4E-29 4.8E-34 268.3 21.1 287 66-398 7-333 (349)
67 3ejj_X Macrophage colony-stimu 100.0 1.3E-28 4.5E-33 253.3 25.5 276 202-593 4-284 (289)
68 1itb_B Type 1 interleukin-1 re 100.0 1.4E-29 4.7E-34 264.2 18.2 272 75-397 14-313 (315)
69 1itb_B Type 1 interleukin-1 re 100.0 1.8E-30 6.2E-35 270.8 11.5 269 214-590 16-314 (315)
70 3o4o_C Interleukin-1 receptor 100.0 3.8E-30 1.3E-34 271.4 14.0 285 64-396 17-333 (339)
71 4fom_A Poliovirus receptor-rel 100.0 8.5E-30 2.9E-34 264.8 15.5 272 75-400 8-302 (308)
72 3oq3_B IFN-alpha/beta binding 100.0 2.6E-28 8.9E-33 255.8 26.6 265 75-396 38-328 (329)
73 3ejj_X Macrophage colony-stimu 100.0 2.3E-28 8E-33 251.4 25.6 274 66-399 4-282 (289)
74 3o4o_C Interleukin-1 receptor 100.0 1.5E-30 5.3E-35 274.4 8.1 284 201-589 17-334 (339)
75 3rjd_A High affinity immunoglo 100.0 1.8E-27 6.1E-32 240.9 29.5 243 65-388 1-249 (262)
76 4fom_A Poliovirus receptor-rel 100.0 1.8E-29 6.1E-34 262.3 15.0 273 214-593 10-303 (308)
77 3oq3_B IFN-alpha/beta binding 100.0 3.7E-28 1.2E-32 254.7 24.6 264 214-589 40-329 (329)
78 2wng_A Tyrosine-protein phosph 100.0 3.4E-28 1.1E-32 255.0 23.4 271 70-392 7-313 (327)
79 3u83_A Poliovirus receptor-rel 100.0 3.8E-28 1.3E-32 255.2 22.4 282 64-401 12-323 (331)
80 3rjd_A High affinity immunoglo 100.0 2.7E-27 9.1E-32 239.6 27.4 242 203-580 2-249 (262)
81 2jll_A NCAM2, neural cell adhe 100.0 2.6E-26 8.8E-31 247.2 35.6 339 304-778 2-377 (389)
82 2wng_A Tyrosine-protein phosph 100.0 1.2E-27 4.2E-32 250.7 24.1 274 204-582 5-311 (327)
83 3u83_A Poliovirus receptor-rel 100.0 5.5E-28 1.9E-32 254.0 21.0 274 202-593 13-323 (331)
84 4dkd_C Macrophage colony-stimu 100.0 4.9E-28 1.7E-32 249.4 18.0 275 64-400 3-283 (292)
85 4dkd_C Macrophage colony-stimu 100.0 4.9E-28 1.7E-32 249.4 17.6 276 201-593 3-284 (292)
86 2jll_A NCAM2, neural cell adhe 100.0 2.8E-25 9.4E-30 239.1 39.5 270 65-394 1-284 (389)
87 3vh8_G Killer cell immunoglobu 100.0 1.1E-27 3.6E-32 249.8 19.4 280 59-399 18-314 (316)
88 2nzi_A Titin; IG-domain, FNIII 100.0 4.6E-26 1.6E-30 236.2 31.3 277 64-391 3-283 (305)
89 2oz4_A Intercellular adhesion 99.9 4.4E-27 1.5E-31 238.2 19.8 238 214-590 14-264 (265)
90 3mjg_X Beta-type platelet-deri 99.9 1.5E-26 5.3E-31 237.7 23.7 259 214-594 11-282 (289)
91 3vh8_G Killer cell immunoglobu 99.9 3.3E-27 1.1E-31 246.0 17.6 276 201-592 23-315 (316)
92 3mjg_X Beta-type platelet-deri 99.9 2.3E-26 8E-31 236.4 23.7 267 72-401 6-281 (289)
93 2oz4_A Intercellular adhesion 99.9 3.1E-26 1.1E-30 232.0 23.5 239 77-398 14-264 (265)
94 2nzi_A Titin; IG-domain, FNIII 99.9 1E-25 3.5E-30 233.6 26.9 194 201-400 3-199 (305)
95 2a38_A Titin; Z1Z2, structural 99.9 1.4E-25 4.8E-30 215.5 21.5 190 493-785 3-194 (194)
96 2wqr_A IG epsilon chain C regi 99.9 1.5E-25 5.1E-30 234.1 21.3 282 201-579 6-309 (323)
97 1za6_B IGG heavy chain; immuno 99.9 1.4E-25 4.7E-30 236.6 19.7 274 73-387 7-330 (344)
98 2j8h_A Titin, connectin; cardi 99.9 1.1E-24 3.9E-29 209.7 23.7 191 494-785 3-196 (197)
99 3rbs_A Myomesin-1; immunoglobu 99.9 3.3E-25 1.1E-29 213.9 18.1 201 495-785 3-206 (207)
100 3lcy_A Titin; A-BAND, IG tande 99.9 3.5E-24 1.2E-28 206.2 24.4 192 492-786 4-196 (197)
101 2yd6_A PTPRD protein; hydrolas 99.9 3.4E-24 1.2E-28 208.9 24.5 196 493-787 4-205 (212)
102 2a38_A Titin; Z1Z2, structural 99.9 4.5E-24 1.5E-28 204.9 23.2 188 64-295 4-193 (194)
103 2yd1_A Tyrosine-protein phosph 99.9 9.3E-24 3.2E-28 205.8 25.2 193 493-788 4-202 (212)
104 2wqr_A IG epsilon chain C regi 99.9 7.5E-25 2.6E-29 228.8 18.7 263 82-387 25-309 (323)
105 1za6_B IGG heavy chain; immuno 99.9 2E-24 6.8E-29 227.6 21.6 289 214-579 11-330 (344)
106 2j8h_A Titin, connectin; cardi 99.9 1.7E-23 5.9E-28 201.3 25.1 191 64-296 3-196 (197)
107 2wv3_A Neuroplastin; igcam, me 99.9 2.2E-23 7.7E-28 199.2 25.6 182 494-786 2-190 (190)
108 3rbs_A Myomesin-1; immunoglobu 99.9 6.8E-24 2.3E-28 204.7 20.5 200 65-295 3-205 (207)
109 3lcy_A Titin; A-BAND, IG tande 99.9 3.3E-23 1.1E-27 199.3 23.8 190 64-297 6-196 (197)
110 2va4_A NCAM2, N-CAM 2, neural 99.9 1.7E-22 5.9E-27 193.4 24.8 183 495-785 2-192 (192)
111 2yd6_A PTPRD protein; hydrolas 99.9 3.2E-22 1.1E-26 194.9 25.6 197 302-593 5-207 (212)
112 2r15_A Myomesin-1; sarcomeric 99.9 2.2E-22 7.6E-27 196.1 23.7 172 599-786 31-210 (212)
113 2yd1_A Tyrosine-protein phosph 99.9 4.3E-22 1.5E-26 194.0 25.6 193 302-593 5-203 (212)
114 2wv3_A Neuroplastin; igcam, me 99.9 6.3E-22 2.2E-26 189.1 25.9 179 303-590 3-190 (190)
115 2v44_A NCAM2, neural cell adhe 99.9 2.3E-22 7.9E-27 192.0 22.2 179 498-786 5-187 (189)
116 2iep_A Muscle-specific kinase 99.9 2.7E-23 9.3E-28 199.1 15.8 184 493-787 5-191 (192)
117 2c5d_C AXL oncogene, tyrosine- 99.9 2.4E-22 8.2E-27 192.9 22.1 186 494-784 1-191 (195)
118 2r15_A Myomesin-1; sarcomeric 99.9 4E-22 1.4E-26 194.2 23.9 197 316-591 14-211 (212)
119 2va4_A NCAM2, N-CAM 2, neural 99.9 5.5E-22 1.9E-26 189.9 24.4 182 65-295 2-191 (192)
120 4fa8_A Secreted protein BARF1; 99.9 2.8E-23 9.5E-28 199.1 14.7 151 599-779 24-195 (203)
121 2v5t_A NCAM2, N-CAM 2, neural 99.9 2.4E-22 8.4E-27 191.8 21.3 183 495-786 2-188 (189)
122 1epf_A NCAM, protein (neural c 99.9 4.5E-22 1.5E-26 190.3 23.0 183 495-785 2-190 (191)
123 4fa8_A Secreted protein BARF1; 99.9 5.2E-23 1.8E-27 197.2 13.6 171 75-289 2-194 (203)
124 3grw_A Fibroblast growth facto 99.9 3.1E-22 1.1E-26 199.4 19.6 199 493-792 9-224 (241)
125 1rhf_A Tyrosine-protein kinase 99.9 5.2E-22 1.8E-26 188.2 19.5 176 495-785 2-182 (182)
126 2c5d_C AXL oncogene, tyrosine- 99.9 2.3E-21 7.7E-26 186.1 23.0 178 65-295 2-191 (195)
127 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.3E-21 4.3E-26 186.8 20.0 181 65-296 2-187 (189)
128 2v44_A NCAM2, neural cell adhe 99.9 2.9E-21 1E-25 184.3 21.8 169 316-589 14-186 (189)
129 3ojm_B Fibroblast growth facto 99.9 3.4E-22 1.1E-26 197.7 14.2 197 493-790 13-225 (231)
130 2vr9_A Roundabout 1, ROBO; imm 99.9 4.5E-22 1.6E-26 194.7 14.8 188 493-786 7-206 (217)
131 2iep_A Muscle-specific kinase 99.9 5.2E-22 1.8E-26 190.1 14.9 183 303-592 7-192 (192)
132 1epf_A NCAM, protein (neural c 99.9 9.4E-21 3.2E-25 181.1 23.6 181 304-589 3-190 (191)
133 3grw_A Fibroblast growth facto 99.9 2.5E-21 8.7E-26 192.8 20.3 192 64-298 10-219 (241)
134 2v9r_A Roundabout homolog 1; p 99.9 7.2E-22 2.5E-26 192.4 14.8 193 493-786 7-202 (212)
135 1rhf_A Tyrosine-protein kinase 99.9 5.9E-21 2E-25 180.9 19.9 175 65-295 2-181 (182)
136 2c1o_A IGK-C protein; FAB frag 99.9 1.4E-21 4.9E-26 196.2 15.2 208 268-580 11-245 (254)
137 1f97_A Junction adhesion molec 99.9 2.1E-21 7.1E-26 189.2 15.9 131 628-788 66-207 (212)
138 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.4E-20 4.8E-25 178.6 21.3 119 635-786 57-183 (184)
139 3k0w_A Mucosa-associated lymph 99.9 8.4E-21 2.9E-25 185.6 19.2 185 493-786 16-202 (218)
140 3sgj_C Human FCG3A receptor; r 99.9 5.4E-21 1.9E-25 184.2 17.3 183 494-802 6-192 (204)
141 3ojm_B Fibroblast growth facto 99.9 8.5E-21 2.9E-25 187.6 19.0 192 64-298 14-222 (231)
142 3jz7_A MCAR, CAR, coxsackievir 99.9 1.2E-21 4.2E-26 191.1 11.9 125 627-785 84-211 (214)
143 2vr9_A Roundabout 1, ROBO; imm 99.8 4.3E-21 1.5E-25 187.7 13.8 186 302-591 8-207 (217)
144 2c1o_A IGK-C protein; FAB frag 99.8 5.4E-21 1.9E-25 192.0 14.8 202 44-287 11-245 (254)
145 3k0w_A Mucosa-associated lymph 99.8 4E-20 1.4E-24 180.7 20.4 184 64-297 17-202 (218)
146 3s97_C Contactin-1; carbonic a 99.8 4.1E-21 1.4E-25 185.2 13.1 88 691-785 113-200 (201)
147 4f80_A Butyrophilin subfamily 99.8 5.9E-20 2E-24 180.7 20.9 129 625-785 81-212 (226)
148 2x1w_L Vascular endothelial gr 99.8 2.1E-20 7.2E-25 181.9 17.0 179 74-297 15-207 (213)
149 3bp6_B Programmed cell death 1 99.8 1.9E-20 6.6E-25 180.7 16.6 128 627-787 67-194 (202)
150 2v9r_A Roundabout homolog 1; p 99.8 8.9E-21 3E-25 184.7 14.1 191 302-596 8-208 (212)
151 1f97_A Junction adhesion molec 99.8 2.6E-20 8.9E-25 181.3 17.2 178 70-296 5-206 (212)
152 3p2t_A Leukocyte immunoglobuli 99.8 4.3E-20 1.5E-24 177.2 18.1 174 63-285 3-179 (196)
153 3sgj_C Human FCG3A receptor; r 99.8 4.8E-20 1.6E-24 177.6 18.3 169 63-298 5-175 (204)
154 2ifg_A High affinity nerve gro 99.8 4.6E-21 1.6E-25 202.0 12.1 201 466-786 137-345 (347)
155 2ifg_A High affinity nerve gro 99.8 2.3E-20 7.7E-25 196.7 16.2 197 48-297 136-345 (347)
156 3r4d_A CEA-related cell adhesi 99.8 8.9E-20 3.1E-24 176.9 18.9 125 629-785 73-199 (208)
157 2x1w_L Vascular endothelial gr 99.8 3.1E-20 1.1E-24 180.8 15.3 180 315-594 18-211 (213)
158 3bp6_B Programmed cell death 1 99.8 5.9E-20 2E-24 177.2 17.0 177 72-297 8-193 (202)
159 1f2q_A High affinity immunoglo 99.8 1.6E-20 5.4E-25 176.7 12.4 75 703-786 96-171 (176)
160 3b5h_A Cervical EMMPRIN, HAB18 99.8 2.6E-19 8.7E-24 169.9 20.8 164 316-590 10-183 (184)
161 2d3v_A Leukocyte immunoglobuli 99.8 5.7E-20 1.9E-24 176.3 16.3 174 63-285 3-180 (196)
162 3s97_C Contactin-1; carbonic a 99.8 2.4E-20 8E-25 179.9 13.4 186 66-296 8-200 (201)
163 1fnl_A Low affinity immunoglob 99.8 2.2E-19 7.5E-24 168.7 17.9 167 62-296 4-173 (175)
164 2fbo_J V1V2;, variable region- 99.8 4.2E-20 1.4E-24 185.0 13.6 184 70-294 6-249 (250)
165 1nbq_A JAM, junctional adhesio 99.8 7.9E-21 2.7E-25 184.5 6.9 129 628-786 69-207 (209)
166 3r4d_A CEA-related cell adhesi 99.8 5.3E-19 1.8E-23 171.4 19.8 171 75-296 8-199 (208)
167 1vca_A VCAM-D1,2, human vascul 99.8 5E-19 1.7E-23 170.1 19.3 174 316-593 13-200 (202)
168 3mj8_L Stimulatory hamster ant 99.8 2.1E-19 7.2E-24 175.0 16.9 178 75-292 9-208 (213)
169 1f2q_A High affinity immunoglo 99.8 1.5E-19 5E-24 170.1 15.2 168 63-297 2-171 (176)
170 2fbo_J V1V2;, variable region- 99.8 1.2E-19 4E-24 181.8 15.4 79 703-784 147-250 (250)
171 1ugn_A LIR1, leukocyte immunog 99.8 3.7E-19 1.3E-23 170.9 18.1 173 63-285 3-181 (198)
172 3jz7_A MCAR, CAR, coxsackievir 99.8 1.1E-19 3.6E-24 177.3 14.5 174 74-296 8-211 (214)
173 1uct_A Immunoglobulin alpha FC 99.8 1.1E-19 3.8E-24 176.8 14.5 171 62-284 6-180 (218)
174 1hng_A CD2; T lymphocyte adhes 99.8 1.4E-19 4.8E-24 169.7 14.6 137 599-784 26-174 (176)
175 1hng_A CD2; T lymphocyte adhes 99.8 8.2E-20 2.8E-24 171.3 12.6 158 75-295 5-174 (176)
176 1oll_A NK receptor; immune sys 99.8 1.8E-19 6.2E-24 171.4 15.0 169 63-284 2-172 (188)
177 4frw_A Poliovirus receptor-rel 99.8 7.1E-20 2.4E-24 178.9 11.6 131 628-787 80-212 (218)
178 1vca_A VCAM-D1,2, human vascul 99.8 1.8E-18 6.1E-23 166.2 20.6 179 69-296 4-196 (202)
179 3knb_B Obscurin-like protein 1 99.8 1.2E-19 4.2E-24 153.4 10.9 97 688-787 10-106 (107)
180 3ry4_A Low affinity immunoglob 99.8 9.6E-19 3.3E-23 163.5 18.1 165 64-295 3-169 (170)
181 3p2t_A Leukocyte immunoglobuli 99.8 4.2E-19 1.4E-23 170.2 15.2 173 201-386 4-179 (196)
182 3mj8_L Stimulatory hamster ant 99.8 6.5E-19 2.2E-23 171.5 16.6 175 316-585 12-208 (213)
183 2gi7_A GPVI protein; IG-like d 99.8 2.7E-19 9.2E-24 169.5 13.3 163 61-285 4-168 (184)
184 1nbq_A JAM, junctional adhesio 99.8 6E-20 2.1E-24 178.3 8.9 176 66-290 4-200 (209)
185 1b6u_A KIR2DL3, P58 killer cel 99.8 2.5E-19 8.6E-24 178.3 13.5 224 63-344 5-240 (257)
186 1fnl_A Low affinity immunoglob 99.8 2.1E-18 7.2E-23 161.9 18.9 166 201-398 6-174 (175)
187 3sbw_C Programmed cell death 1 99.8 2E-18 7E-23 169.2 19.2 132 626-788 79-213 (222)
188 3d9a_L Light chain of hyhel10 99.8 4.7E-19 1.6E-23 172.5 14.5 177 73-291 8-207 (213)
189 2d3v_A Leukocyte immunoglobuli 99.8 2.7E-19 9.1E-24 171.6 12.4 174 201-387 4-181 (196)
190 1lk3_L 9D7 light chain; antige 99.8 6.3E-19 2.2E-23 171.1 15.0 173 73-287 7-202 (210)
191 2pet_A Lutheran blood group gl 99.8 1.9E-18 6.4E-23 170.7 18.6 129 629-784 79-229 (231)
192 1ugn_A LIR1, leukocyte immunog 99.8 1.3E-18 4.4E-23 167.2 16.8 183 302-588 4-196 (198)
193 2ny1_B T-cell surface glycopro 99.8 4.8E-19 1.6E-23 168.0 13.4 160 75-298 4-180 (184)
194 4f80_A Butyrophilin subfamily 99.8 3E-18 1E-22 168.4 18.3 180 72-296 10-212 (226)
195 3tv3_L PGT128 light chain, IG 99.8 9.5E-19 3.3E-23 170.0 14.3 176 75-292 9-206 (211)
196 1uct_A Immunoglobulin alpha FC 99.8 7E-19 2.4E-23 171.2 13.2 183 201-399 8-199 (218)
197 3nl4_L Antigen binding fragmen 99.8 2.3E-18 8E-23 167.6 16.9 167 73-281 8-198 (213)
198 4frw_A Poliovirus receptor-rel 99.8 1E-18 3.5E-23 170.7 14.4 180 72-296 5-210 (218)
199 1q0x_L FAB 9B1, light chain; a 99.8 2.9E-18 9.7E-23 166.8 17.4 178 73-291 7-209 (212)
200 2gi7_A GPVI protein; IG-like d 99.8 1E-18 3.6E-23 165.4 13.8 160 201-386 7-168 (184)
201 2pet_A Lutheran blood group gl 99.8 1.4E-18 4.6E-23 171.7 15.2 168 71-283 5-211 (231)
202 2ghw_B Anti-SARS SCFV antibody 99.8 2.8E-18 9.5E-23 171.3 17.5 189 507-785 13-241 (247)
203 1f3r_B FV antibody fragment; I 99.8 9.2E-19 3.2E-23 175.8 13.7 192 507-786 11-245 (257)
204 1mq8_A ICAM-1, intercellular a 99.8 1E-18 3.5E-23 175.4 13.4 258 214-593 10-285 (291)
205 1p6f_A NKP46, natural cytotoxi 99.8 2.6E-18 9E-23 169.6 16.1 183 62-297 4-191 (242)
206 2ghw_B Anti-SARS SCFV antibody 99.8 8.9E-18 3E-22 167.6 20.1 190 75-295 11-240 (247)
207 1nkr_A P58-CL42 KIR; inhibitor 99.8 3.8E-18 1.3E-22 164.2 16.1 173 62-284 5-184 (201)
208 1oll_A NK receptor; immune sys 99.8 2.5E-18 8.7E-23 163.4 14.6 168 201-385 3-172 (188)
209 1nqb_A Single-chain antibody f 99.8 5.6E-18 1.9E-22 169.7 17.8 135 624-788 76-235 (256)
210 3auv_A SC-DSFV derived from th 99.8 1.3E-17 4.3E-22 169.4 20.2 205 495-791 12-259 (276)
211 1lk3_L 9D7 light chain; antige 99.8 3.8E-18 1.3E-22 165.6 15.7 169 316-581 12-203 (210)
212 3s96_B 3B5H10 FAB light chain; 99.8 3.6E-18 1.2E-22 166.9 15.5 176 75-291 9-214 (218)
213 3d9a_L Light chain of hyhel10 99.8 2.7E-18 9.3E-23 167.1 14.3 171 316-583 13-206 (213)
214 3ry4_A Low affinity immunoglob 99.8 6.2E-18 2.1E-22 157.9 16.1 163 203-396 5-169 (170)
215 3knb_A Titin; IG-like, titin, 99.8 2.4E-18 8E-23 143.6 11.6 93 690-785 4-98 (100)
216 1nqb_A Single-chain antibody f 99.8 1.4E-17 4.9E-22 166.7 19.6 180 73-296 7-232 (256)
217 1f3r_B FV antibody fragment; I 99.8 6.2E-18 2.1E-22 169.7 16.9 181 75-284 9-232 (257)
218 3juy_B 3B3 single chain varian 99.8 1.4E-17 4.8E-22 167.1 19.3 191 66-285 6-244 (256)
219 1jbj_A CD3 epsilon and gamma e 99.8 1.1E-18 3.7E-23 165.4 10.3 163 77-287 10-179 (186)
220 3r06_A Anti-mouse CD3epsilon a 99.8 9.1E-18 3.1E-22 163.4 17.0 174 73-287 8-203 (213)
221 3s96_B 3B5H10 FAB light chain; 99.8 6.1E-18 2.1E-22 165.3 15.2 174 315-584 11-214 (218)
222 2if7_A SLAM family member 6; N 99.8 1.4E-17 4.9E-22 158.7 17.2 161 74-291 6-186 (193)
223 1q0x_L FAB 9B1, light chain; a 99.8 1.6E-17 5.5E-22 161.4 17.9 172 316-582 12-207 (212)
224 3tv3_L PGT128 light chain, IG 99.8 5.5E-18 1.9E-22 164.6 14.5 172 316-584 12-205 (211)
225 3juy_B 3B3 single chain varian 99.8 1.7E-17 6E-22 166.4 18.4 146 624-784 82-255 (256)
226 2ny1_B T-cell surface glycopro 99.8 3.1E-18 1.1E-22 162.3 12.1 160 214-401 6-182 (184)
227 3umt_A SCFV heavy chain and li 99.8 1.8E-17 6.1E-22 166.3 18.2 152 625-790 79-249 (256)
228 3mj6_A Junctional adhesion mol 99.8 7.1E-18 2.4E-22 170.7 15.3 205 66-321 6-256 (268)
229 1mq8_A ICAM-1, intercellular a 99.8 2.8E-18 9.5E-23 172.3 11.9 257 75-399 8-283 (291)
230 1c1e_H Catalytic antibody 1E9 99.8 6.6E-18 2.3E-22 165.1 14.4 181 507-783 11-217 (219)
231 2zg1_A Sialic acid-binding IG- 99.8 1.3E-17 4.5E-22 162.3 16.4 172 68-287 2-203 (214)
232 1b6u_A KIR2DL3, P58 killer cel 99.8 4.6E-18 1.6E-22 169.1 13.2 171 201-385 6-183 (257)
233 3gkz_A Anti-methamphetamine si 99.8 3E-17 1E-21 164.8 19.3 150 625-790 84-253 (257)
234 3sbw_C Programmed cell death 1 99.8 1.7E-17 5.7E-22 162.6 17.1 178 73-297 8-211 (222)
235 2xzc_L FAB A.17 light chain; i 99.7 6E-18 2.1E-22 165.0 13.6 176 73-289 7-207 (216)
236 3gkz_A Anti-methamphetamine si 99.7 6.5E-17 2.2E-21 162.4 21.4 189 66-284 8-235 (257)
237 3uzq_A Anti-dengue MAB 4E11; d 99.7 1.2E-17 4.1E-22 167.3 15.5 195 507-789 12-247 (253)
238 1moe_A Anti-CEA MAB T84.66; an 99.7 1.8E-17 6.1E-22 164.7 16.6 170 73-282 8-219 (240)
239 4i0k_A CD276 antigen; immunogl 99.7 3.2E-18 1.1E-22 167.8 10.3 181 75-297 4-206 (222)
240 1dr9_A B7-1 (CD80), T lymphocy 99.7 1E-17 3.5E-22 161.3 13.6 174 75-293 3-197 (201)
241 1hnf_A CD2; T lymphocyte adhes 99.7 1.9E-17 6.5E-22 155.1 15.0 157 75-294 8-178 (182)
242 3auv_A SC-DSFV derived from th 99.7 4.3E-17 1.5E-21 165.4 18.8 185 66-283 13-235 (276)
243 3r06_A Anti-mouse CD3epsilon a 99.7 2.7E-17 9.2E-22 160.0 16.6 170 316-581 13-204 (213)
244 3sob_L Antibody light chain; b 99.7 2.4E-17 8.1E-22 163.4 16.5 175 73-289 31-228 (237)
245 3esu_F Antibody 14B7* light ch 99.7 5.5E-17 1.9E-21 162.2 19.0 185 71-282 9-231 (250)
246 3uzq_A Anti-dengue MAB 4E11; d 99.7 2.7E-17 9.3E-22 164.7 16.7 196 73-297 8-244 (253)
247 3nl4_L Antigen binding fragmen 99.7 5.2E-17 1.8E-21 158.0 18.2 171 205-382 4-198 (213)
248 1nfd_E H57 FAB; complex (immun 99.7 9.7E-19 3.3E-23 170.1 5.8 173 73-286 6-201 (212)
249 1c1e_H Catalytic antibody 1E9 99.7 1.2E-17 4.2E-22 163.2 13.7 180 73-293 7-216 (219)
250 3pv7_A B7-H6, IG-like domain-c 99.7 4.1E-17 1.4E-21 162.9 17.7 134 627-791 82-229 (248)
251 1qok_A MFE-23 recombinant anti 99.7 4.3E-17 1.5E-21 165.9 18.1 195 507-790 37-272 (282)
252 4fmk_A Poliovirus receptor-rel 99.7 9.6E-18 3.3E-22 164.6 12.2 129 628-785 84-216 (225)
253 3bkj_L WO2 IGG2A FAB fragment 99.7 1.3E-17 4.5E-22 166.9 13.3 173 73-287 41-241 (252)
254 1nkr_A P58-CL42 KIR; inhibitor 99.7 6.4E-17 2.2E-21 155.6 17.6 171 201-385 7-184 (201)
255 3umt_A SCFV heavy chain and li 99.7 5.5E-17 1.9E-21 162.8 17.8 194 75-296 11-244 (256)
256 1qok_A MFE-23 recombinant anti 99.7 6.6E-17 2.2E-21 164.6 18.5 194 73-296 33-267 (282)
257 3esu_F Antibody 14B7* light ch 99.7 5.3E-17 1.8E-21 162.3 17.5 144 617-771 64-231 (250)
258 1dr9_A B7-1 (CD80), T lymphocy 99.7 8.8E-17 3E-21 154.7 18.3 153 599-782 26-197 (201)
259 1p6f_A NKP46, natural cytotoxi 99.7 3.5E-17 1.2E-21 161.5 15.7 183 201-400 6-193 (242)
260 2if7_A SLAM family member 6; N 99.7 7E-17 2.4E-21 153.9 17.2 139 599-780 27-186 (193)
261 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 1.8E-17 6.1E-22 162.4 13.2 179 507-783 11-220 (222)
262 3sob_L Antibody light chain; b 99.7 4.6E-17 1.6E-21 161.3 16.3 171 316-583 36-229 (237)
263 2p1y_A Bispecific alpha/beta T 99.7 3.6E-17 1.2E-21 162.2 15.3 177 73-284 7-222 (238)
264 1hnf_A CD2; T lymphocyte adhes 99.7 7.5E-17 2.6E-21 151.0 16.6 137 599-784 29-179 (182)
265 1jbj_A CD3 epsilon and gamma e 99.7 3.7E-18 1.2E-22 161.8 7.6 149 215-388 11-179 (186)
266 3d9a_H Heavy chain of hyhel10 99.7 1.7E-17 5.9E-22 160.9 12.2 87 690-780 117-208 (210)
267 1svz_A Immunoglobulin;, single 99.7 8.7E-17 3E-21 160.4 17.4 180 73-283 8-228 (247)
268 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 3.7E-17 1.3E-21 160.2 14.0 178 75-293 9-219 (222)
269 2j6e_L IGM, FAB light chain; a 99.7 8.4E-18 2.9E-22 166.3 9.3 179 73-291 26-229 (234)
270 3ux9_B SCFV antibody; five hel 99.7 1.7E-16 5.7E-21 159.3 18.5 186 75-284 11-236 (256)
271 2xzc_L FAB A.17 light chain; i 99.7 4.2E-17 1.4E-21 159.0 13.7 171 316-582 12-207 (216)
272 2v5y_A Receptor-type tyrosine- 99.7 5E-15 1.7E-19 172.3 33.5 246 81-392 91-348 (731)
273 3ux9_B SCFV antibody; five hel 99.7 1.9E-16 6.5E-21 158.9 18.5 146 617-773 64-236 (256)
274 1sy6_A T-cell surface glycopro 99.7 8.8E-18 3E-22 161.6 8.3 167 599-784 28-202 (204)
275 1nfd_E H57 FAB; complex (immun 99.7 5.2E-18 1.8E-22 164.9 6.8 171 316-581 11-203 (212)
276 4fmk_A Poliovirus receptor-rel 99.7 3.2E-17 1.1E-21 160.8 12.5 178 71-294 6-214 (225)
277 3knb_B Obscurin-like protein 1 99.7 3.8E-17 1.3E-21 138.0 11.0 97 493-592 11-107 (107)
278 3d9a_H Heavy chain of hyhel10 99.7 2E-17 6.9E-22 160.4 10.8 177 73-290 7-207 (210)
279 2znx_A SCFV; fluorotryptohpan, 99.7 1.2E-16 4E-21 158.7 16.5 178 73-283 8-222 (242)
280 2v5y_A Receptor-type tyrosine- 99.7 2.9E-15 1E-19 174.2 30.8 415 216-779 89-555 (731)
281 4dzb_B Vbeta2 (MAIT T cell rec 99.7 4.7E-17 1.6E-21 162.3 13.3 177 73-286 8-220 (246)
282 4i0k_A CD276 antigen; immunogl 99.7 3.4E-17 1.2E-21 160.4 12.0 180 214-401 6-209 (222)
283 3eow_R Poliovirus receptor; im 99.7 1E-17 3.6E-22 164.0 8.2 179 72-295 5-210 (221)
284 3pv7_A B7-H6, IG-like domain-c 99.7 1.5E-16 5.2E-21 158.8 16.5 184 66-295 3-224 (248)
285 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 2.4E-16 8.2E-21 158.0 17.9 189 71-286 8-235 (256)
286 2j6e_L IGM, FAB light chain; a 99.7 2.6E-17 9E-22 162.7 10.7 174 315-584 30-229 (234)
287 2vol_A Murine IGG FC; FC, zinc 99.7 7E-17 2.4E-21 156.0 13.4 181 66-285 2-196 (207)
288 3shs_A HOC head outer capsid p 99.7 2.8E-15 9.5E-20 141.3 23.6 239 75-383 11-279 (304)
289 3bkj_L WO2 IGG2A FAB fragment 99.7 8.3E-17 2.8E-21 161.0 14.2 168 316-580 46-241 (252)
290 3qib_D 2B4 beta chain; IG doma 99.7 7.3E-17 2.5E-21 163.3 13.9 205 269-579 4-244 (270)
291 1mju_H Immunoglobulin MS6-12; 99.7 6.8E-17 2.3E-21 158.6 13.1 93 691-789 121-220 (227)
292 3mtr_A N-CAM-1, NCAM-1, neural 99.7 5.2E-17 1.8E-21 158.2 12.0 169 492-664 16-210 (215)
293 2vol_A Murine IGG FC; FC, zinc 99.7 1.5E-16 5.2E-21 153.6 15.1 171 316-579 15-197 (207)
294 1moe_A Anti-CEA MAB T84.66; an 99.7 3.3E-16 1.1E-20 155.5 17.9 165 214-383 12-219 (240)
295 2dru_A Chimera of CD48 antigen 99.7 1.4E-16 4.8E-21 149.5 14.4 155 75-293 8-177 (180)
296 2fbj_H IGA-kappa J539 FAB (hea 99.7 1.7E-16 5.8E-21 155.0 15.3 172 74-288 8-212 (220)
297 1sy6_A T-cell surface glycopro 99.7 1.8E-17 6.2E-22 159.4 8.2 184 78-294 15-201 (204)
298 2gjj_A A21 single-chain antibo 99.7 2.9E-16 9.9E-21 157.9 17.3 184 72-283 11-239 (264)
299 2zg1_A Sialic acid-binding IG- 99.7 1.3E-16 4.4E-21 155.3 14.1 170 315-587 11-210 (214)
300 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.1E-15 3.6E-20 149.6 20.5 179 74-291 8-221 (223)
301 2fbj_H IGA-kappa J539 FAB (hea 99.7 2.2E-16 7.6E-21 154.1 15.5 83 691-777 123-212 (220)
302 1ccz_A Protein (CD58); LFA-3, 99.7 7.4E-17 2.5E-21 150.0 11.3 152 75-293 4-167 (171)
303 2cqv_A MLCK, myosin light chai 99.7 1.9E-16 6.6E-21 136.3 12.9 97 690-789 6-102 (114)
304 1pz5_B Heavy chain of FAB (SYA 99.7 2.6E-16 8.9E-21 153.8 15.4 174 507-781 11-216 (220)
305 3nl4_H Antigen binding fragmen 99.7 1.6E-16 5.4E-21 154.7 13.6 182 74-294 7-211 (215)
306 3mtr_A N-CAM-1, NCAM-1, neural 99.7 2.4E-16 8.1E-21 153.5 14.8 184 65-296 19-208 (215)
307 4dzb_B Vbeta2 (MAIT T cell rec 99.7 4E-16 1.4E-20 155.5 16.7 174 316-581 13-222 (246)
308 3qib_D 2B4 beta chain; IG doma 99.7 1.5E-16 5.3E-21 160.9 13.7 170 214-387 38-244 (270)
309 2znx_A SCFV; fluorotryptohpan, 99.7 4.8E-16 1.6E-20 154.3 16.9 175 316-576 13-222 (242)
310 3eow_R Poliovirus receptor; im 99.7 2.1E-17 7.2E-22 161.8 6.9 174 315-588 10-210 (221)
311 2rgs_A I, IG gamma-2B heavy ch 99.7 8.5E-17 2.9E-21 156.8 11.2 185 63-286 7-205 (218)
312 3bqu_C 3H6 FAB light chain; be 99.7 8.4E-18 2.9E-22 166.2 3.9 171 73-285 30-223 (233)
313 2rgs_A I, IG gamma-2B heavy ch 99.7 1.6E-16 5.4E-21 154.9 12.9 184 302-579 8-205 (218)
314 3mj6_A Junctional adhesion mol 99.7 1.4E-16 4.9E-21 161.1 13.1 183 205-399 8-238 (268)
315 2p1y_A Bispecific alpha/beta T 99.7 2.9E-16 1E-20 155.6 15.0 172 316-577 12-222 (238)
316 1gsm_A Madcam-1, mucosal addre 99.7 2.8E-15 9.7E-20 141.5 20.9 161 75-286 16-194 (210)
317 1mju_H Immunoglobulin MS6-12; 99.7 2.2E-16 7.5E-21 154.9 13.9 182 73-296 7-216 (227)
318 3shs_A HOC head outer capsid p 99.7 1.8E-14 6.1E-19 135.9 25.8 213 316-648 14-279 (304)
319 1op3_H FAB 2G12, heavy chain; 99.7 1.4E-16 4.6E-21 156.3 12.0 174 74-289 8-217 (225)
320 3qp3_A Titin; I-SET IG-like, s 99.7 3.1E-16 1E-20 132.3 12.5 94 690-786 7-100 (103)
321 2gki_A Nuclease; anti-DNA anti 99.7 7.3E-16 2.5E-20 157.4 17.3 180 74-285 30-259 (291)
322 1pz5_B Heavy chain of FAB (SYA 99.7 2.3E-16 8E-21 154.1 13.1 178 73-292 7-216 (220)
323 3nfj_J T cell receptor beta ch 99.7 3.8E-16 1.3E-20 155.5 14.4 178 72-286 7-219 (245)
324 3fku_X Neutralizing antibody F 99.7 7.2E-16 2.5E-20 156.5 16.2 183 73-284 7-234 (280)
325 1g1c_A Immunoglobulin-like dom 99.7 4.4E-16 1.5E-20 130.3 12.0 94 690-786 4-98 (99)
326 1svz_A Immunoglobulin;, single 99.7 9E-16 3.1E-20 153.0 16.5 175 316-576 13-228 (247)
327 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1.4E-15 4.7E-20 153.6 18.0 183 73-283 22-254 (268)
328 3nl4_H Antigen binding fragmen 99.7 6.5E-16 2.2E-20 150.3 14.8 178 316-587 11-211 (215)
329 3fku_X Neutralizing antibody F 99.7 5.7E-16 2E-20 157.3 15.0 155 624-794 76-258 (280)
330 1ccz_A Protein (CD58); LFA-3, 99.7 7.6E-16 2.6E-20 143.1 14.5 136 599-784 22-169 (171)
331 2gki_A Nuclease; anti-DNA anti 99.7 1.3E-15 4.5E-20 155.5 17.6 196 506-786 32-272 (291)
332 3q5y_A TCR N15 beta; IG, T cel 99.7 8.6E-16 2.9E-20 152.4 15.8 174 73-285 9-212 (240)
333 3m8o_H Immunoglobulin A1 heavy 99.7 1.9E-15 6.4E-20 147.8 17.7 169 74-287 8-213 (221)
334 1dn0_B IGM-kappa cold agglutin 99.7 2.1E-15 7.1E-20 148.4 18.0 184 74-296 8-226 (232)
335 3bae_H WO2 IGG2A FAB fragment 99.7 5.1E-16 1.7E-20 152.5 13.5 178 73-292 7-221 (228)
336 3puc_A Titin; I-SET IG-like do 99.7 6.8E-16 2.3E-20 129.2 12.2 94 690-786 5-98 (99)
337 3knb_A Titin; IG-like, titin, 99.7 4.4E-16 1.5E-20 129.8 10.8 94 494-590 4-99 (100)
338 1dee_B IGM RF 2A2; FAB-IBP com 99.7 6.5E-15 2.2E-19 144.0 21.1 173 316-584 12-221 (223)
339 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 3.1E-15 1.1E-19 149.8 18.7 193 316-590 15-248 (256)
340 2dru_A Chimera of CD48 antigen 99.7 2.8E-16 9.6E-21 147.5 10.3 154 315-587 10-178 (180)
341 4ei6_B Vbeta16 XV19 type II na 99.7 8.1E-16 2.8E-20 153.1 14.2 174 73-285 9-218 (245)
342 1wit_A Twitchin 18TH IGSF modu 99.6 6E-16 2.1E-20 127.6 10.9 90 691-785 2-93 (93)
343 1dn0_B IGM-kappa cold agglutin 99.6 2.3E-15 7.9E-20 148.1 17.1 82 703-786 136-227 (232)
344 3pl6_D MBP peptide / T-cell re 99.6 1.3E-15 4.6E-20 153.8 15.7 176 72-286 32-241 (268)
345 1op3_H FAB 2G12, heavy chain; 99.6 8.7E-16 3E-20 150.5 13.6 169 316-581 12-216 (225)
346 3bqu_C 3H6 FAB light chain; be 99.6 4.4E-17 1.5E-21 161.0 4.1 167 316-579 35-224 (233)
347 3irg_B Obscurin-like protein 1 99.6 6.7E-16 2.3E-20 131.3 10.9 95 690-787 12-106 (107)
348 2kkq_A Myotilin; unknown funct 99.6 9.1E-16 3.1E-20 132.2 11.8 101 688-791 12-114 (116)
349 1hxm_B Gamma-delta T-cell rece 99.6 3.6E-15 1.2E-19 147.9 17.6 186 72-294 7-226 (242)
350 1waa_A Titin; metal binding pr 99.6 1.3E-15 4.5E-20 124.8 11.8 88 690-785 4-91 (93)
351 4acp_A IG gamma-1 chain C regi 99.6 9.5E-16 3.3E-20 150.5 12.8 203 274-578 1-217 (240)
352 2w59_A IGY FCU3-4; immunoglobu 99.6 9.5E-16 3.2E-20 150.7 12.4 184 64-286 11-217 (231)
353 2yuz_A Myosin-binding protein 99.6 6.4E-16 2.2E-20 128.8 9.4 92 690-788 6-97 (100)
354 2w59_A IGY FCU3-4; immunoglobu 99.6 1E-15 3.4E-20 150.5 12.4 183 303-579 12-217 (231)
355 3liz_H 4C3 monoclonal antibody 99.6 1.6E-15 5.6E-20 151.5 14.1 183 73-295 7-218 (253)
356 3bae_H WO2 IGG2A FAB fragment 99.6 1.8E-15 6.1E-20 148.6 13.8 173 316-585 12-221 (228)
357 1gsm_A Madcam-1, mucosal addre 99.6 1.9E-14 6.4E-19 136.0 20.1 157 213-386 17-193 (210)
358 1u2h_A APEG-1, aortic preferen 99.6 1.1E-15 3.8E-20 127.8 10.5 94 690-786 4-98 (99)
359 3nfj_J T cell receptor beta ch 99.6 6.7E-15 2.3E-19 146.4 18.1 174 316-581 13-221 (245)
360 2gjj_A A21 single-chain antibo 99.6 6.4E-15 2.2E-19 148.1 17.7 176 203-384 6-239 (264)
361 3omz_A Human vdelta1 gamma del 99.6 9.3E-16 3.2E-20 154.0 11.5 183 72-282 8-230 (259)
362 2wbj_D OB TCR; transmembrane, 99.6 8.6E-15 2.9E-19 148.6 18.7 182 66-286 25-245 (279)
363 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.6E-14 5.3E-19 145.8 20.4 177 202-384 15-254 (268)
364 2kdg_A Myotilin; immonoglobuli 99.6 1E-15 3.5E-20 128.3 9.7 95 690-787 4-99 (100)
365 3q5y_A TCR N15 beta; IG, T cel 99.6 4.6E-15 1.6E-19 147.1 16.1 170 316-579 14-213 (240)
366 2bk8_A Connectin, M1, titin he 99.6 6.6E-15 2.3E-19 122.4 14.5 89 694-785 4-93 (97)
367 2dm2_A Palladin; beta-sandwich 99.6 1E-15 3.5E-20 130.8 9.7 99 689-790 6-106 (110)
368 3m8o_H Immunoglobulin A1 heavy 99.6 1E-14 3.5E-19 142.5 18.1 166 316-581 12-214 (221)
369 1c5d_H Monoclonal antibody aga 99.6 1.7E-15 5.8E-20 147.3 12.3 177 74-291 8-210 (215)
370 1bec_A 14.3.D T cell antigen r 99.6 7.9E-15 2.7E-19 145.0 17.4 174 72-284 5-210 (238)
371 2xqy_G A13-D6.3 monoclonal ant 99.6 3.1E-15 1.1E-19 149.6 14.6 175 73-289 13-217 (261)
372 2xqy_G A13-D6.3 monoclonal ant 99.6 3.6E-15 1.2E-19 149.1 14.9 174 507-779 17-218 (261)
373 4ei6_B Vbeta16 XV19 type II na 99.6 6.4E-15 2.2E-19 146.6 16.6 170 316-579 14-219 (245)
374 1l6x_A Immunoglobulin gamma-1 99.6 1.5E-15 5.3E-20 146.6 11.7 181 66-285 2-196 (207)
375 3liz_H 4C3 monoclonal antibody 99.6 6.4E-15 2.2E-19 147.1 16.4 134 625-785 77-219 (253)
376 2lvc_A Obscurin-like protein 1 99.6 7.6E-16 2.6E-20 125.2 7.8 88 690-784 3-91 (91)
377 1i1c_A IGG2A, IG gamma-2A chai 99.6 1.2E-15 4.1E-20 150.4 10.7 183 65-286 15-211 (239)
378 2e7c_A Myosin-binding protein 99.6 3.3E-15 1.1E-19 129.4 12.3 97 688-788 18-117 (118)
379 1i1c_A IGG2A, IG gamma-2A chai 99.6 2E-15 6.9E-20 148.8 11.9 171 316-579 29-211 (239)
380 3bn9_D E2 FAB heavy chain; ant 99.6 1E-15 3.4E-20 152.5 9.7 176 74-291 8-224 (257)
381 1l6x_A Immunoglobulin gamma-1 99.6 3.2E-15 1.1E-19 144.3 12.9 170 317-579 16-197 (207)
382 4acp_A IG gamma-1 chain C regi 99.6 2.7E-15 9.1E-20 147.3 12.1 196 50-285 1-217 (240)
383 3irg_A Titin; IG-like, titin, 99.6 4.2E-15 1.4E-19 124.6 11.3 93 690-785 4-98 (100)
384 3pl6_D MBP peptide / T-cell re 99.6 5.5E-15 1.9E-19 149.3 14.1 170 316-579 38-241 (268)
385 1nct_A Titin; cell adhesion, g 99.6 1.1E-15 3.7E-20 129.3 7.1 95 688-785 11-105 (106)
386 1hxm_B Gamma-delta T-cell rece 99.6 2.5E-14 8.7E-19 141.7 18.1 181 316-588 13-227 (242)
387 1he7_A High affinity nerve gro 99.6 8.2E-15 2.8E-19 125.2 12.2 94 690-790 3-103 (126)
388 3qp3_A Titin; I-SET IG-like, s 99.6 9.3E-15 3.2E-19 123.1 12.4 98 491-591 4-101 (103)
389 2lu7_A Obscurin-like protein 1 99.6 1.5E-15 5.1E-20 121.3 6.8 79 699-785 4-82 (84)
390 2dm3_A KIAA0992 protein, palla 99.6 1.3E-15 4.5E-20 130.2 6.9 100 689-791 7-107 (110)
391 2wbj_D OB TCR; transmembrane, 99.6 3.5E-14 1.2E-18 144.1 18.6 172 316-580 36-246 (279)
392 2edh_A Obscurin; structural ge 99.6 4.1E-15 1.4E-19 127.7 9.8 93 690-791 18-110 (113)
393 3to4_D NKT vbeta2 (mouse varia 99.6 2.6E-15 9E-20 150.0 9.1 174 72-284 7-217 (253)
394 2edj_A Roundabout homolog 2; K 99.6 3.7E-15 1.3E-19 124.8 8.4 91 690-786 7-98 (100)
395 3kvq_A Vascular endothelial gr 99.6 2.4E-15 8.1E-20 128.1 7.2 95 690-789 9-103 (108)
396 3tv3_H PGT128 heavy chain, IG 99.6 1.4E-14 4.6E-19 143.3 13.5 183 73-294 7-234 (239)
397 1c5d_H Monoclonal antibody aga 99.6 1.9E-14 6.5E-19 139.8 14.1 173 316-584 12-210 (215)
398 2dav_A SLOW MYBP-C, myosin-bin 99.6 2.3E-15 7.9E-20 128.7 6.3 100 691-793 7-118 (126)
399 3omz_A Human vdelta1 gamma del 99.6 6.3E-15 2.1E-19 148.0 10.5 175 204-383 4-230 (259)
400 2ckn_A Basic fibroblast growth 99.6 1.2E-14 4E-19 120.2 10.3 87 690-784 8-94 (95)
401 3bn9_D E2 FAB heavy chain; ant 99.6 8E-15 2.7E-19 146.0 10.8 169 316-581 12-221 (257)
402 2cqv_A MLCK, myosin light chai 99.6 2.5E-14 8.5E-19 123.0 12.5 98 493-593 5-102 (114)
403 3qhz_H Human monoclonal antibo 99.6 1.3E-14 4.4E-19 142.9 12.2 183 74-295 8-227 (232)
404 2eo9_A Roundabout homolog 1; b 99.6 6E-15 2.1E-19 127.8 8.5 94 689-788 6-100 (118)
405 3o3u_N Maltose-binding peripla 99.6 1.7E-14 5.8E-19 163.5 14.6 168 73-285 373-565 (581)
406 2edf_A Obscurin; beta-sandwich 99.6 9E-15 3.1E-19 123.2 9.1 94 689-790 6-99 (103)
407 1x44_A Myosin-binding protein 99.6 1.2E-14 3.9E-19 122.4 9.7 92 691-790 7-100 (103)
408 2yr3_A Myosin light chain kina 99.6 7.3E-15 2.5E-19 122.8 8.2 90 690-785 10-99 (99)
409 1gxe_A Myosin binding protein 99.6 8.8E-15 3E-19 129.3 9.0 85 698-785 25-138 (139)
410 1bec_A 14.3.D T cell antigen r 99.6 8.1E-14 2.8E-18 137.7 17.1 169 316-578 11-211 (238)
411 1fhg_A Telokin; immunoglobulin 99.5 2.7E-14 9.1E-19 130.2 12.4 95 690-787 40-135 (154)
412 3puc_A Titin; I-SET IG-like do 99.5 3.6E-14 1.2E-18 118.5 12.1 95 493-590 4-98 (99)
413 1g1c_A Immunoglobulin-like dom 99.5 4.3E-14 1.5E-18 118.1 12.2 95 493-590 3-98 (99)
414 1waa_A Titin; metal binding pr 99.5 7.5E-14 2.6E-18 114.2 13.0 89 64-160 4-92 (93)
415 3u2s_H PG9 heavy chain; greek 99.5 2.5E-14 8.4E-19 141.9 12.0 182 74-294 7-235 (248)
416 1oga_E TRBC1, T-cell receptor 99.5 6E-14 2E-18 140.0 14.9 176 72-286 9-218 (252)
417 3tv3_H PGT128 heavy chain, IG 99.5 7.5E-14 2.6E-18 137.9 15.2 177 316-588 12-235 (239)
418 2eny_A Obscurin; beta-sandwich 99.5 9.5E-15 3.2E-19 122.8 7.5 93 690-789 7-100 (104)
419 2lvc_A Obscurin-like protein 1 99.5 1.9E-14 6.7E-19 116.8 9.0 86 66-158 4-91 (91)
420 2e6p_A Obscurin-like protein 1 99.5 2E-14 6.7E-19 121.3 9.3 92 690-789 6-100 (104)
421 1wwb_X Protein (brain derived 99.5 4.1E-14 1.4E-18 118.7 11.2 92 690-787 3-99 (103)
422 3irg_B Obscurin-like protein 1 99.5 3.7E-14 1.3E-18 120.4 11.0 98 492-592 10-107 (107)
423 2yuz_A Myosin-binding protein 99.5 3E-14 1E-18 118.6 10.0 92 64-162 6-97 (100)
424 3cx2_A Myosin-binding protein 99.5 6.6E-14 2.2E-18 118.9 12.2 93 690-785 3-107 (108)
425 1ow0_A IG alpha-1 chain C regi 99.5 6E-15 2E-19 143.2 6.3 179 65-285 3-199 (214)
426 3n9g_H FAB fragment of MAB CR4 99.5 8.2E-14 2.8E-18 136.8 14.5 182 74-296 8-224 (230)
427 2cry_A KIN of IRRE-like protei 99.5 1.1E-15 3.8E-20 133.3 0.9 97 690-790 13-117 (122)
428 1ypz_F T-cell receptor gamma c 99.5 2.9E-14 9.9E-19 140.0 11.0 180 72-286 7-216 (230)
429 2e7c_A Myosin-binding protein 99.5 8.8E-14 3E-18 120.3 12.7 99 491-592 17-117 (118)
430 2lu7_A Obscurin-like protein 1 99.5 2.4E-14 8E-19 114.3 8.3 79 75-160 5-83 (84)
431 2dlt_A Myosin binding protein 99.5 1.9E-14 6.5E-19 121.8 8.2 91 689-785 6-96 (106)
432 3qhz_H Human monoclonal antibo 99.5 1.5E-13 5E-18 135.3 15.3 179 316-588 12-227 (232)
433 2bk8_A Connectin, M1, titin he 99.5 2.9E-13 9.8E-18 112.4 14.5 89 70-160 5-94 (97)
434 3to4_D NKT vbeta2 (mouse varia 99.5 2.3E-14 7.7E-19 143.2 9.1 168 316-577 13-217 (253)
435 2e6q_A Obscurin-like protein 1 99.5 9.2E-14 3.1E-18 116.8 11.1 93 690-790 7-109 (112)
436 2edk_A Myosin-binding protein 99.5 9.7E-15 3.3E-19 122.4 4.9 90 690-787 7-100 (101)
437 2yuv_A Myosin-binding protein 99.5 1.1E-13 3.7E-18 115.7 11.3 92 690-788 6-97 (100)
438 3o3u_N Maltose-binding peripla 99.5 1.1E-13 3.6E-18 156.9 15.0 146 599-776 395-567 (581)
439 3caf_A Fibroblast growth facto 99.5 3.7E-14 1.3E-18 118.7 8.4 90 690-784 3-99 (100)
440 1wit_A Twitchin 18TH IGSF modu 99.5 7.4E-14 2.5E-18 114.9 10.0 90 495-589 2-93 (93)
441 2edn_A Myosin-binding protein 99.5 3.8E-14 1.3E-18 119.8 8.2 94 690-786 11-116 (118)
442 2aty_A Complement receptor chi 99.5 2.8E-13 9.4E-18 143.6 16.6 170 316-579 180-362 (376)
443 2kdg_A Myotilin; immonoglobuli 99.5 6.3E-14 2.2E-18 117.3 9.3 96 493-591 3-99 (100)
444 1u2h_A APEG-1, aortic preferen 99.5 2.3E-13 7.9E-18 113.6 12.5 93 65-160 5-98 (99)
445 2k1m_A Myosin-binding protein 99.5 1.4E-13 4.9E-18 113.7 11.0 88 690-785 7-94 (95)
446 3iu4_H CHP3 FAB heavy chain; a 99.5 1.8E-13 6.1E-18 137.0 13.9 178 75-294 9-221 (263)
447 3u2s_H PG9 heavy chain; greek 99.5 2.3E-13 7.9E-18 134.9 14.6 180 316-589 11-237 (248)
448 2kkq_A Myotilin; unknown funct 99.5 4.3E-13 1.5E-17 115.3 13.6 99 61-162 11-111 (116)
449 2dku_A KIAA1556 protein; beta- 99.5 9.9E-14 3.4E-18 116.7 9.2 93 690-790 7-99 (103)
450 2e7b_A Obscurin; IG-like domai 99.5 5.3E-14 1.8E-18 118.4 7.5 95 689-791 6-100 (103)
451 3mlr_H Human monoclonal anti-H 99.5 3.1E-13 1.1E-17 132.2 14.1 177 75-292 9-221 (226)
452 1oga_E TRBC1, T-cell receptor 99.5 3.6E-13 1.2E-17 134.3 14.8 171 316-580 15-219 (252)
453 1wwc_A Protein (NT-3 growth fa 99.5 1.5E-13 5.2E-18 118.8 10.5 93 690-788 7-103 (118)
454 2aty_A Complement receptor chi 99.5 4.8E-13 1.6E-17 141.7 16.6 182 66-285 167-361 (376)
455 1ypz_E T cell receptor delta, 99.5 4.8E-13 1.6E-17 128.7 15.1 166 72-287 7-199 (207)
456 1ypz_F T-cell receptor gamma c 99.5 1.4E-13 4.8E-18 135.1 11.4 174 316-579 13-216 (230)
457 1ow0_A IG alpha-1 chain C regi 99.5 2.4E-14 8.3E-19 138.8 5.7 179 304-579 4-200 (214)
458 1pd6_A Cardiac MYBP-C;, myosin 99.5 1.7E-13 5.8E-18 114.9 9.8 91 688-785 12-103 (104)
459 2dm7_A KIAA1556 protein; beta- 99.5 1.6E-13 5.3E-18 116.7 9.7 93 690-791 7-99 (108)
460 2cr6_A KIAA1556 protein, obscu 99.5 8.8E-15 3E-19 125.9 1.9 92 690-788 12-104 (115)
461 2yuv_A Myosin-binding protein 99.5 4.2E-13 1.4E-17 112.1 12.0 92 64-162 6-97 (100)
462 3n9g_H FAB fragment of MAB CR4 99.5 1.1E-12 3.7E-17 128.8 16.8 178 316-589 12-224 (230)
463 3bfo_A Mucosa-associated lymph 99.5 3.6E-13 1.2E-17 110.2 11.1 84 690-785 2-86 (91)
464 3sob_H Antibody heavy chain, l 99.5 4.4E-13 1.5E-17 134.0 14.1 180 75-295 32-249 (256)
465 2cr3_A Basic fibroblast growth 99.5 9.1E-14 3.1E-18 115.8 7.6 85 698-790 10-94 (99)
466 1nct_A Titin; cell adhesion, g 99.5 1.1E-13 3.9E-18 116.7 8.2 95 62-159 11-105 (106)
467 2dm2_A Palladin; beta-sandwich 99.5 1.6E-13 5.6E-18 117.0 9.0 98 493-593 6-105 (110)
468 1fhg_A Telokin; immunoglobulin 99.5 4.4E-13 1.5E-17 122.0 12.3 104 489-595 35-139 (154)
469 3irg_A Titin; IG-like, titin, 99.5 2.9E-13 9.8E-18 113.2 10.2 94 494-590 4-99 (100)
470 1he7_A High affinity nerve gro 99.4 5.7E-13 1.9E-17 113.7 12.0 93 494-593 3-102 (126)
471 2eny_A Obscurin; beta-sandwich 99.4 1.6E-13 5.4E-18 115.3 8.4 90 66-162 9-99 (104)
472 2e6q_A Obscurin-like protein 1 99.4 7.4E-13 2.5E-17 111.2 12.5 91 64-162 7-107 (112)
473 2edj_A Roundabout homolog 2; K 99.4 2.7E-13 9.3E-18 113.3 9.5 95 492-592 5-100 (100)
474 1gxe_A Myosin binding protein 99.4 3.1E-13 1.1E-17 119.3 9.8 85 503-589 25-138 (139)
475 2dav_A SLOW MYBP-C, myosin-bin 99.4 2.7E-13 9.4E-18 115.9 8.5 95 65-160 7-111 (126)
476 2cpc_A KIAA0657 protein; immun 99.4 9E-13 3.1E-17 113.0 11.9 91 690-788 9-102 (113)
477 2edh_A Obscurin; structural ge 99.4 2.1E-12 7.1E-17 110.7 13.8 99 487-594 10-109 (113)
478 1wwb_X Protein (brain derived 99.4 7.6E-13 2.6E-17 110.9 10.8 95 493-593 2-101 (103)
479 1x44_A Myosin-binding protein 99.4 7.4E-13 2.5E-17 111.2 10.6 91 65-162 6-98 (103)
480 2yr3_A Myosin light chain kina 99.4 3.1E-13 1.1E-17 112.7 8.1 94 490-589 6-99 (99)
481 3so5_A LIG-3, leucine-rich rep 99.4 9.5E-13 3.2E-17 112.7 11.2 94 690-784 9-111 (112)
482 3kvq_A Vascular endothelial gr 99.4 2E-13 6.7E-18 116.1 6.8 99 490-593 5-103 (108)
483 3m45_A Cell adhesion molecule 99.4 8.1E-13 2.8E-17 112.3 10.4 94 690-787 5-107 (108)
484 2cr6_A KIAA1556 protein, obscu 99.4 4.3E-13 1.5E-17 115.3 8.4 97 61-164 8-106 (115)
485 2ckn_A Basic fibroblast growth 99.4 1.1E-12 3.8E-17 108.2 10.5 87 64-158 8-94 (95)
486 3mlr_H Human monoclonal anti-H 99.4 3.5E-12 1.2E-16 124.6 15.6 175 316-586 12-222 (226)
487 1pd6_A Cardiac MYBP-C;, myosin 99.4 1E-12 3.5E-17 110.1 10.0 92 61-159 11-103 (104)
488 3iu4_H CHP3 FAB heavy chain; a 99.4 2.1E-12 7.2E-17 129.1 14.0 179 316-590 12-224 (263)
489 2ens_A Advanced glycosylation 99.4 2.6E-13 8.8E-18 112.4 6.1 87 690-788 9-95 (96)
490 2v9t_A Roundabout homolog 1; s 99.4 2.9E-13 9.8E-18 116.9 6.3 93 690-785 8-108 (117)
491 2edf_A Obscurin; beta-sandwich 99.4 7.3E-13 2.5E-17 111.3 8.6 93 493-593 6-98 (103)
492 2dm3_A KIAA0992 protein, palla 99.4 2.4E-13 8.1E-18 116.0 5.6 98 493-593 7-105 (110)
493 2edk_A Myosin-binding protein 99.4 4.6E-13 1.6E-17 112.0 7.0 90 64-161 7-100 (101)
494 3sob_H Antibody heavy chain, l 99.4 3.9E-12 1.3E-16 127.1 15.0 178 316-589 35-250 (256)
495 2eo9_A Roundabout homolog 1; b 99.4 2.2E-12 7.7E-17 111.4 11.3 93 64-162 7-100 (118)
496 2e6p_A Obscurin-like protein 1 99.4 1.2E-12 4.2E-17 110.2 9.2 92 64-162 6-99 (104)
497 3cx2_A Myosin-binding protein 99.4 3.7E-12 1.3E-16 107.9 12.1 93 64-159 3-107 (108)
498 4hwu_A Fibroblast growth facto 99.4 1.1E-12 3.8E-17 108.3 8.5 80 698-786 8-87 (95)
499 2edn_A Myosin-binding protein 99.4 2.2E-12 7.5E-17 109.0 10.0 96 65-161 12-117 (118)
500 3s35_X Vascular endothelial gr 99.4 2.5E-12 8.6E-17 111.9 10.7 83 703-787 19-111 (122)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=2.2e-74 Score=653.56 Aligned_cols=546 Identities=24% Similarity=0.455 Sum_probs=474.4
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
..+|.|+.++. ++.+.+|+.++|.|.+. |.|.+.|+|+|||..+....++.+...++..+|.|.+++.+|+|.|+|.
T Consensus 3 ~~pP~f~~~~~-~~~v~~G~~v~L~C~~~--g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 79 (570)
T 3b43_A 3 MEPPYFIEPLE-HVEAAIGEPITLQCKVD--GTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCK 79 (570)
T ss_dssp CCCCEEEECCC-CEEECTTSCEEEEEEEE--SSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCcceEECC-ceEEcCCCEEEEEEEEc--cCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEE
Confidence 46788877655 78999999999999998 7899999999999999988899888877788999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
|.|..|.......+.|.... .||.|...+.+. .+.+|+.+.
T Consensus 80 a~N~~g~~~~~~~l~v~~~~--------------------------------------~~p~~~~~~~~~-~~~~G~~v~ 120 (570)
T 3b43_A 80 AENSVGAVASSAVLVIKERK--------------------------------------LPPSFARKLKDV-HETLGFPVA 120 (570)
T ss_dssp EEETTEEEEEEEEEEECCCC--------------------------------------CCCEESSCCCCE-EEETTSCEE
T ss_pred EEeCCceEEEEEEEEECCCC--------------------------------------CCCcccccCCCe-EecCCCeEE
Confidence 99999988888777765321 356666655554 367899999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCC
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQ 302 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~ 302 (805)
|.|.+ .|.|.+++.|+|+|..+....++..........|.|.++..+|+|.|+|.|.|..|....+..+.|.... .
T Consensus 121 l~C~~--~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~--~ 196 (570)
T 3b43_A 121 FECRI--NGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHE--V 196 (570)
T ss_dssp EEEEE--ESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--C
T ss_pred EEEEE--ccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCC--C
Confidence 99998 6788899999999999988777766556667899999999999999999999999998888888776432 4
Q ss_pred CCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEE
Q psy2166 303 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 382 (805)
Q Consensus 303 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 382 (805)
+|.+...+.... +.+|+.++|.|.+. +.|.+.++|+|+|..+..+.++.+........|.|.++..+|+|.|+|.|.
T Consensus 197 pp~~~~~p~~~~-v~~G~~~~l~C~~~--g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 273 (570)
T 3b43_A 197 PPFFDLKPVSVD-LALGESGTFKCHVT--GTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYAS 273 (570)
T ss_dssp CCEEEECCCCBC-CBSBSCEEEEEEEE--SSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEE
T ss_pred CCccccCCceeE-ecCCCeEEEEEEEE--ECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEE
Confidence 677766665554 88999999999998 888999999999999988777777666666789999999999999999999
Q ss_pred eCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEe
Q psy2166 383 NKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLT 462 (805)
Q Consensus 383 n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (805)
|..|.....+.|.|
T Consensus 274 N~~g~~~~~~~l~V------------------------------------------------------------------ 287 (570)
T 3b43_A 274 NVAGKDSCSAQLGV------------------------------------------------------------------ 287 (570)
T ss_dssp ETTEEEEEEEEECC------------------------------------------------------------------
T ss_pred CCCCcEEEEEEEEe------------------------------------------------------------------
Confidence 99999887777765
Q ss_pred ccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCC
Q psy2166 463 PVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHG 542 (805)
Q Consensus 463 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~ 542 (805)
..+|.|...+.....+.+|+.+.|.|.+. |.|.+.++|+|+|..+..+
T Consensus 288 ------------------------------~~~p~~~~~~~~~~~v~~g~~~~l~C~~~--g~P~p~v~W~k~~~~l~~~ 335 (570)
T 3b43_A 288 ------------------------------QEPPRFIKKLEPSRIVKQDEHTRYECKIG--GSPEIKVLWYKDETEIQES 335 (570)
T ss_dssp ------------------------------BCCCEEEECCCSBCCEESSCEEEEEEEEE--SSSSCEEEEEETTEECCCS
T ss_pred ------------------------------ecCCcccccCCCccEEcCCCcEEEEEEEe--eCCCCEEEEeECCEECCCC
Confidence 35677776655544578999999999999 7899999999999999988
Q ss_pred CceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeee--------------------ecCCCCe
Q psy2166 543 HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLI--------------------LESQLPE 602 (805)
Q Consensus 543 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~--------------------~~~~~p~ 602 (805)
.++.+...+....|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+. .+.|.|.
T Consensus 336 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~ 415 (570)
T 3b43_A 336 SKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQ 415 (570)
T ss_dssp SSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCC
T ss_pred CcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCE
Confidence 88887777777889999999999999999999999999999999998776542 1247789
Q ss_pred EEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCC
Q psy2166 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAG 682 (805)
Q Consensus 603 v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~ 682 (805)
++|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 416 v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~-------------------- 475 (570)
T 3b43_A 416 VSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK-------------------- 475 (570)
T ss_dssp CEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC--------------------
T ss_pred EEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec--------------------
Confidence 999999999998889998888888889999999999999999999999999999999887
Q ss_pred CCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEE-ccCCCCeEEEeeCcEEEEEEcCCCCCC
Q psy2166 683 VPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKP-IEASHRIRTVHAFGMVVLEILGTKIED 761 (805)
Q Consensus 683 ~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~-l~~~~~~~~~~~~~~~~L~i~~v~~~d 761 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|+|.|+|+|+|.. +..+.++.+...++...|.|.++..+|
T Consensus 476 -------~~P~~~~~~~~~-~~~~g~~~~l~c~~~--g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 545 (570)
T 3b43_A 476 -------APPRFVKKLSDI-STVVGEEVQLQATIE--GAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPAN 545 (570)
T ss_dssp -------CCCEEEECCCCB-CCBTTCCEEEEEEEE--SCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTC
T ss_pred -------cCCcccccCCCc-eecCCCeEEEEEEEe--cCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHH
Confidence 588999888888 999999999999999 999999999999854 455677777767777899999999999
Q ss_pred CEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 762 TGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 762 ~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
+|.|+|.|.|.+|.++.++.|.|.
T Consensus 546 ~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 546 AGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp CEEEEEEEECSSCEEEEEEEECCB
T ss_pred CEEEEEEEEECCcEEEEEEEEEEe
Confidence 999999999999999999999885
No 2
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5.8e-63 Score=570.31 Aligned_cols=531 Identities=18% Similarity=0.261 Sum_probs=410.2
Q ss_pred hhhhhHHhhhhhhcCccccCCCCCC----------CCc---CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEE
Q psy2166 36 AGLEKVQEVEHALAGKYQRQPSGPE----------ETF---AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEW 102 (805)
Q Consensus 36 ~g~~~i~~~~~~d~g~y~c~~~~~~----------~~~---~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W 102 (805)
++.|.|.+++.+|+|.|+|.+.... .+. .+|.+... ....+.+|+.++|.|.+. + |.+.|+|
T Consensus 70 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~--~~~~v~~g~~v~l~C~~~--~-p~~~v~W 144 (642)
T 1e07_A 70 NASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSN--NSKPVEDKDAVAFTCEPE--T-QDATYLW 144 (642)
T ss_pred CCcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEcc--CceeEecCCcEEEEEECC--C-CCeeEEE
Confidence 3578999999999999999654321 111 23443322 235688999999999998 4 7899999
Q ss_pred EECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhH
Q psy2166 103 IFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQ 181 (805)
Q Consensus 103 ~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~ 181 (805)
+|||..+..+.++.+..+++ .|.|.+++.+|+|.|+|.|.|..|.. .....|.|...+.
T Consensus 145 ~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~------------------ 204 (642)
T 1e07_A 145 WVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPD------------------ 204 (642)
T ss_pred EECCeECCCCCceEEcCCCC--EEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCC------------------
Confidence 99999999888887766543 89999999999999999999987764 3456677764321
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeE
Q psy2166 182 DLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMV 261 (805)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~ 261 (805)
.+...+... .+.+|+.++|.|.+ .+.|.+.+.|+++|..+... .
T Consensus 205 ----------------------~~~~~~~~~-~~~~G~~~~l~C~~--~g~p~~~i~W~~~g~~i~~~-----------~ 248 (642)
T 1e07_A 205 ----------------------APTISPLNT-SYRSGENLNLSCHA--ASNPPAQYSWFVNGTFQQST-----------Q 248 (642)
T ss_pred ----------------------CcEEecCCc-ccccCCEEEEEEEc--CCCCCcEEEEEECCeEcccC-----------C
Confidence 111122222 47899999999998 78999999999999987432 3
Q ss_pred EEEEcCCCCcccEEEEEEEEcCCeeEEEE--EEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEE
Q psy2166 262 VLEILGTKIEDTGVYTCRATNKWGQAEIS--VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVE 339 (805)
Q Consensus 262 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~--~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~ 339 (805)
.|.|.+++.+|+|.|+|.|.|..|....+ +.|.|...+ .+|.+.. .....+..|+.+.|.|.+. +.| +.+.
T Consensus 249 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~--~~p~i~~--~~~~~~~~g~~v~l~C~~~--~~p-~~v~ 321 (642)
T 1e07_A 249 ELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEP--PKPFITS--NNSNPVEDEDAVALTCEPE--IQN-TTYL 321 (642)
T ss_pred ceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccC--CCCEEEc--CCceeEecCCcEEEEEECC--CCC-ccEE
Confidence 59999999999999999999988765443 455554321 2344432 2233366688899999997 555 6999
Q ss_pred EEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHh
Q psy2166 340 WFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIREL 418 (805)
Q Consensus 340 W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~ 418 (805)
|+++|+.+....++.+..++. .|.|.++..+|+|.|+|.|.|..|... ..+.|.|...|.
T Consensus 322 W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~----------------- 382 (642)
T 1e07_A 322 WWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPD----------------- 382 (642)
T ss_pred EEECCccCCCcCCEEEeCCCC--EEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCC-----------------
Confidence 999999998777776655443 699999999999999999999998643 346676643221
Q ss_pred hhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCce
Q psy2166 419 ENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKF 498 (805)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~ 498 (805)
.+
T Consensus 383 ------------------------------------------------------------------------------~~ 384 (642)
T 1e07_A 383 ------------------------------------------------------------------------------DP 384 (642)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 11
Q ss_pred EecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCc
Q psy2166 499 ITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG 578 (805)
Q Consensus 499 ~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 578 (805)
...+.. ..+.+|+.++|.|.+. |.|.+.++|+|||..+..+. .|.|.++..+|+|.|+|.|.|..|
T Consensus 385 ~~~~~~-~~~~~g~~~~l~C~~~--g~p~~~i~W~~~g~~~~~~~-----------~L~i~~~~~~d~G~Y~C~a~n~~g 450 (642)
T 1e07_A 385 TISPSY-TYYRPGVNLSLSCHAA--SNPPAQYSWLIDGNIQQHTQ-----------ELFISNITEKNSGLYTCQANNSAS 450 (642)
T ss_pred eecCCc-eEecCCCcEEEEEEcC--ccCCCeEEEEECCEEcCCCc-----------eEEEccCChhhCeEEEEEEEcCCC
Confidence 122222 2378999999999998 78889999999999886432 499999999999999999999998
Q ss_pred ceEEEEE--EEEee---eeee--------------eec----CCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCC
Q psy2166 579 SDVTKAS--LKCVS---KTNL--------------ILE----SQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCY 635 (805)
Q Consensus 579 ~~~~~~~--l~V~~---~~~~--------------~~~----~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~ 635 (805)
....+.. |.|.. ++.+ .+. .+.+.+.|+++|..+..+.++.+..++ ..|.|.++.
T Consensus 451 ~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~ 528 (642)
T 1e07_A 451 GHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGN--RTLTLFNVT 528 (642)
T ss_pred CCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCCCCcEEEEEECCEeCCCCCcEEEcCCC--cEEEEeecC
Confidence 8765543 44432 1211 111 356799999999999888888776554 359999999
Q ss_pred CCCcEEEEEEEEeCCcceEE-EEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEE
Q psy2166 636 EENSGVYECRATNKYGSDVT-KASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEA 714 (805)
Q Consensus 636 ~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C 714 (805)
.+|+|.|+|.|.|..|.... .+.|.|.. .|+.+...+.+. .+.+|+.+.|.|
T Consensus 529 ~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~--------------------------~p~~~~~~~~~~-~v~~g~~~~l~C 581 (642)
T 1e07_A 529 RNDARAYVCGIQNSVSANRSDPVTLDVLY--------------------------GPDTPIISPPDS-SYLSGANLNLSC 581 (642)
T ss_pred hhcCceEEEEeEcCCCCccCCCEEEEEEe--------------------------CCCcceecCCce-eEEcCCcEEEEE
Confidence 99999999999999998654 68899885 344555566677 899999999999
Q ss_pred EEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEe
Q psy2166 715 SLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 715 ~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 787 (805)
.+. |.|.|.|+|+|||..+..+ ..|.|.++..+|+|.|+|.|.|.+|..+.++.|+|.+.
T Consensus 582 ~~~--g~p~p~v~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~v~ 641 (642)
T 1e07_A 582 HSA--SNPSPQYSWRINGIPQQHT-----------QVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVS 641 (642)
T ss_pred Eec--cCCCCeEEEEECCEECccC-----------ceEEECcccccCCeEEEEEEEecccCcceeEEEEEEEc
Confidence 998 9999999999999988643 26999999999999999999999999999999999874
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3.3e-62 Score=553.73 Aligned_cols=500 Identities=22% Similarity=0.408 Sum_probs=416.5
Q ss_pred EEEEEEEecCCc-----eeccccCCCC-----------chhhhhHHhhhhhhcCccccCCCCCCC------------CcC
Q psy2166 13 TSGTLKCLGQKD-----IYLETQHPMG-----------AAGLEKVQEVEHALAGKYQRQPSGPEE------------TFA 64 (805)
Q Consensus 13 ~~~~l~~~~~~~-----~~~~~~~~~~-----------~~g~~~i~~~~~~d~g~y~c~~~~~~~------------~~~ 64 (805)
.+++|.|...+. .|++++.+.. ..+.|.|.+++.+|+|.|+|.+.+... ...
T Consensus 21 ~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~ 100 (570)
T 3b43_A 21 EPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKL 100 (570)
T ss_dssp SCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCC
T ss_pred CEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCC
Confidence 357788876542 4666544431 224678999999999999998664321 123
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAW 144 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 144 (805)
+|.|...+. ++.+.+|+.++|.|.+. |.|.+.|+|+|||..+..+.++.........+|.|.+++.+|+|.|+|.|.
T Consensus 101 ~p~~~~~~~-~~~~~~G~~v~l~C~~~--g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 177 (570)
T 3b43_A 101 PPSFARKLK-DVHETLGFPVAFECRIN--GSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSAS 177 (570)
T ss_dssp CCEESSCCC-CEEEETTSCEEEEEEEE--SSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcccccCC-CeEecCCCeEEEEEEEc--cCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEE
Confidence 566655444 67888999999999998 688899999999999998888776666666799999999999999999999
Q ss_pred eCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEE
Q psy2166 145 NLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFE 224 (805)
Q Consensus 145 n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~ 224 (805)
|..|.......+.|.... .||.|...+... .+.+|+.++|.
T Consensus 178 n~~g~~~~~~~l~v~~~~--------------------------------------~pp~~~~~p~~~-~v~~G~~~~l~ 218 (570)
T 3b43_A 178 NPLGTASSSAKLTLSEHE--------------------------------------VPPFFDLKPVSV-DLALGESGTFK 218 (570)
T ss_dssp ETTEEEEEEEEEEEECCC--------------------------------------CCCEEEECCCCB-CCBSBSCEEEE
T ss_pred eCCcEEEEEEEEEEcCCC--------------------------------------CCCccccCCcee-EecCCCeEEEE
Confidence 999998888888875421 456666655554 47899999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCC
Q psy2166 225 ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 304 (805)
Q Consensus 225 C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p 304 (805)
|.+ .|.|.+.++|+|+|..+....++.+....+...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|. .+|
T Consensus 219 C~~--~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~-----~~p 291 (570)
T 3b43_A 219 CHV--TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ-----EPP 291 (570)
T ss_dssp EEE--ESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCB-----CCC
T ss_pred EEE--EECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEee-----cCC
Confidence 998 6888899999999999988888777666677899999999999999999999999999888888876 577
Q ss_pred eEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeC
Q psy2166 305 KFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNK 384 (805)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 384 (805)
.+...+.....+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....++.+........|.|.++..+|+|.|+|.|.|.
T Consensus 292 ~~~~~~~~~~~v~~g~~~~l~C~~~--g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 369 (570)
T 3b43_A 292 RFIKKLEPSRIVKQDEHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNA 369 (570)
T ss_dssp EEEECCCSBCCEESSCEEEEEEEEE--SSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBT
T ss_pred cccccCCCccEEcCCCcEEEEEEEe--eCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeC
Confidence 7776655544578999999999998 89999999999999998888877766667778999999999999999999999
Q ss_pred ceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEecc
Q psy2166 385 YGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPV 464 (805)
Q Consensus 385 ~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (805)
.|.....+.|.|.
T Consensus 370 ~g~~~~~~~l~V~------------------------------------------------------------------- 382 (570)
T 3b43_A 370 AGSASSSTSLKVK------------------------------------------------------------------- 382 (570)
T ss_dssp TBCCEEEEEECEE-------------------------------------------------------------------
T ss_pred CCEEEEEEEEEec-------------------------------------------------------------------
Confidence 9999888888774
Q ss_pred CCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc
Q psy2166 465 TDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR 544 (805)
Q Consensus 465 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~ 544 (805)
.+|.|...+... .+.+|++++|.|.+. |.|.|.|+|+|||..|..+.+
T Consensus 383 -----------------------------~~P~~~~~~~~~-~~~~G~~v~l~C~~~--g~P~p~v~W~k~g~~l~~~~~ 430 (570)
T 3b43_A 383 -----------------------------EPPVFRKKPHPV-ETLKGADVHLECELQ--GTPPFQVSWHKDKRELRSGKK 430 (570)
T ss_dssp -----------------------------CCCEECSCCCCE-EECTTCCEEEEEEEE--SSSSCCCEEEETTEECCSSSS
T ss_pred -----------------------------CCCeeecCCCce-eecCCCEEEEEEEEe--cCCCCEEEEEECCEECcCCCC
Confidence 344454444443 378999999999999 788899999999999998889
Q ss_pred eEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeee--------------------cCCCCeEE
Q psy2166 545 YRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLIL--------------------ESQLPEVE 604 (805)
Q Consensus 545 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~--------------------~~~~p~v~ 604 (805)
+.+..++....|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+.. +.|.|.+.
T Consensus 431 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~ 510 (570)
T 3b43_A 431 YKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISVA 510 (570)
T ss_dssp EEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCCE
T ss_pred EEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEEE
Confidence 9888888888899999999999999999999999999999999988776432 34678999
Q ss_pred EEECCEEc-cCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEe
Q psy2166 605 WFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662 (805)
Q Consensus 605 W~~~g~~l-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 662 (805)
|+|+|..+ ..+.++.+...++...|.|.++..+|+|.|+|.|.|.+|...+++.|.|.
T Consensus 511 W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 511 WFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp EEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred EEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 99998654 45667777767778899999999999999999999999999999999886
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=6.6e-62 Score=577.57 Aligned_cols=551 Identities=21% Similarity=0.294 Sum_probs=427.4
Q ss_pred chhhhhHHhhhhhhc-CccccCCCCCC---CC---------------cCCCeEEecC-CCCceecCCCcEEEEEEEecCC
Q psy2166 35 AAGLEKVQEVEHALA-GKYQRQPSGPE---ET---------------FAKPVFIVPL-KPEFKLGEAQPLHLEAQVEPKN 94 (805)
Q Consensus 35 ~~g~~~i~~~~~~d~-g~y~c~~~~~~---~~---------------~~~p~~~~~~-~~~~~v~~G~~v~L~C~~~~~~ 94 (805)
..|.|.|.+++.+|. |.|+|.+.... .. ..+|.+.... +....+.+|+.++|.|.+. |
T Consensus 197 ~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~--g 274 (816)
T 3dmk_A 197 PSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQ--G 274 (816)
T ss_dssp TTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECCCCB--C
T ss_pred cCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEEEee--e
Confidence 356789999999998 99999754211 00 1123332211 1235778999999999998 6
Q ss_pred CCCceEEEEECCEe------cCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccc
Q psy2166 95 DPNLKIEWIFNGKP------LELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERT 168 (805)
Q Consensus 95 ~p~~~v~W~k~g~~------i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~ 168 (805)
.|.+.|.|+|++.. +....++... ++ +|.|.+++.+|+|.|+|.|.|..|.......|.|..++
T Consensus 275 ~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~------ 344 (816)
T 3dmk_A 275 YPVPVFRWYKFIEGTTRKQAVVLNDRVKQV--SG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPL------ 344 (816)
T ss_dssp SSCCEEEEEEECTTSSCEEECCCSSSEEEE--TT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEE------
T ss_pred cCCCeEEEEeCCCCCccCcceecCCceEec--cc--eEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCC------
Confidence 89999999995432 2223343322 22 79999999999999999999999988888888876432
Q ss_pred cCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccC
Q psy2166 169 QHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA 248 (805)
Q Consensus 169 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~ 248 (805)
.+...+... .+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+..
T Consensus 345 -----------------------------------~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~~~v~W~k~g~~~~~ 386 (816)
T 3dmk_A 345 -----------------------------------SAKIDPPTQ-TVDFGRPAVFTCQY--TGNPIKTVSWMKDGKAIGH 386 (816)
T ss_dssp -----------------------------------EEEEESSEE-ECCTTSCEEEEEEE--EEECCCEEEEEETTEECSC
T ss_pred -----------------------------------ceeeCCCce-EecCCCCEEEEEEE--eccCCCEEEEEECCEECCC
Confidence 222222222 47899999999998 5778899999999998865
Q ss_pred CCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEE
Q psy2166 249 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTL 328 (805)
Q Consensus 249 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 328 (805)
.. ..|.|.+++.+|+|.|+|.+.|..+....++.+.|.... .+|.+...+.... +.+|+.+.|.|.+
T Consensus 387 ~~----------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~--~~p~i~~~~~~~~-v~~G~~v~L~C~~ 453 (816)
T 3dmk_A 387 SE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRF--DPPVIRQAFQEET-MEPGPSVFLKCVA 453 (816)
T ss_dssp CS----------SEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSS--CCCEEEEECCCEE-ECSSSCEEEEEEE
T ss_pred CC----------CEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEcccc--CCCceEecCcceE-EcCCCCEEEEEEE
Confidence 43 269999999999999999999999888877777764322 5677766555544 8899999999999
Q ss_pred eecCCCCcEEEEEECCEEccCCCceEEEE-----eCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEeccccc
Q psy2166 329 TPVNDPELKVEWFHNGKPIFHKNRVKMVS-----DFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVY 403 (805)
Q Consensus 329 ~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 403 (805)
. +.|.+.++|+++|..+....++.... ......|.|.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 454 ~--g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~---- 527 (816)
T 3dmk_A 454 G--GNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGL---- 527 (816)
T ss_dssp E--CSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSS----
T ss_pred e--cCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecC----
Confidence 7 89999999999999998776665432 123356999999999999999999999999988888887532
Q ss_pred ccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCC
Q psy2166 404 LDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQ 483 (805)
Q Consensus 404 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 483 (805)
T Consensus 528 -------------------------------------------------------------------------------- 527 (816)
T 3dmk_A 528 -------------------------------------------------------------------------------- 527 (816)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCC-
Q psy2166 484 QPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCY- 562 (805)
Q Consensus 484 ~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~- 562 (805)
|.+ ..+... .+.+|+.++|.|.+. +.|.+.++|+|+|..+..+.+..+..++ .|.|.++.
T Consensus 528 ------------p~~-~~~~~~-~v~~G~~v~l~C~~~--g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~l~i~~v~~ 588 (816)
T 3dmk_A 528 ------------PYI-RQMEKK-AIVAGETLIVTCPVA--GYPIDSIVWERDNRALPINRKQKVFPNG---TLIIENVER 588 (816)
T ss_dssp ------------CEE-CCCCCE-EEETTCCEEEECCEE--CSSEEEEEEEETTEESCCSTTEEECTTS---EEEESSCCH
T ss_pred ------------Cee-EccCCe-EEecCCeEEEEEEec--CCCCCEEEEEECCeEcccCCceEEecCC---eEEEEecCc
Confidence 222 122222 378999999999999 7788899999999999877766654443 49999998
Q ss_pred CCCCEEEEEEEEcCCcce-EEEEEEEEeeeeee----------------eecC-----C-CCeEEEEECCEEccCCCceE
Q psy2166 563 EENSGVYECRATNKYGSD-VTKASLKCVSKTNL----------------ILES-----Q-LPEVEWFYNGKKLPHGHRYR 619 (805)
Q Consensus 563 ~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~----------------~~~~-----~-~p~v~W~~~g~~l~~~~~~~ 619 (805)
.+|+|.|+|.|.|..|.. ...+.|.|..++.+ .+.| + .+.+.|+++|..+..+..+.
T Consensus 589 ~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~ 668 (816)
T 3dmk_A 589 NSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGIT 668 (816)
T ss_dssp HHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCE
T ss_pred cccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCee
Confidence 589999999999999854 45667777665532 1222 2 33899999999987665555
Q ss_pred EEe-eCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecC
Q psy2166 620 TFH-DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEF 698 (805)
Q Consensus 620 ~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~ 698 (805)
... .+....|.|.++..+|+|.|+|.|.|..|.....+.|.|.. ||.|...+
T Consensus 669 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~---------------------------~P~~~~~~ 721 (816)
T 3dmk_A 669 TSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV---------------------------PPRWILEP 721 (816)
T ss_dssp EEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE---------------------------EEEEEECC
T ss_pred EEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe---------------------------CCceeeec
Confidence 443 34567899999999999999999999999999999999984 67777777
Q ss_pred CcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEcc-------CCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEc
Q psy2166 699 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE-------ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATN 771 (805)
Q Consensus 699 ~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~-------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 771 (805)
.+. .+.+|+.++|.|.+. |.|.|.|+|+|++..+. .+.++.+ ..+ +|.|.++..+|+|.|+|.|.|
T Consensus 722 ~~~-~v~~G~~v~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~N 794 (816)
T 3dmk_A 722 TDK-AFAQGSDAKVECKAD--GFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV--EEG--TLHVDNIQKTNEGYYLCEAIN 794 (816)
T ss_dssp CCE-EEETTCCEEEECEEE--EESCCEEECCEECSSSTTCCBCCCCBTTEEE--ETT--EEEECSCCGGGCEEEEEEEEC
T ss_pred ccc-eecCCCcEEEEEEEe--cCCCCeEEEEecCCCCCccccccccCCCEEe--cCC--EEEECcCChhhCeEEEEEEEe
Confidence 777 899999999999999 99999999999875443 2233332 334 699999999999999999999
Q ss_pred CCccEEEEEEEEEEEe
Q psy2166 772 KWGQAEISVNLECVVW 787 (805)
Q Consensus 772 ~~G~~~~~~~l~V~~~ 787 (805)
.+|.+..++.+..+..
T Consensus 795 ~~G~~~~~v~~~~~~~ 810 (816)
T 3dmk_A 795 GIGSGLSAVIMISVQA 810 (816)
T ss_dssp SSSSCEEEEEEEEEEC
T ss_pred CCCCCcEEEEEEEeec
Confidence 9999999998887653
No 5
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.7e-58 Score=548.31 Aligned_cols=640 Identities=18% Similarity=0.264 Sum_probs=458.7
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEE-CCEecCCCCceEEEecCcEEEEEEcccccCC-----
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF-NGKPLELGSRFKTTADFGFVTLDLTEVYDRD----- 135 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k-~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D----- 135 (805)
...+|.|...+...+.+.+|+.++|.|.+. |.|.+.|.|+| ||..+....+......++ +|.|.++..+|
T Consensus 35 ~~~~P~~~~~p~~~~~~~~g~~~~l~C~a~--g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g--~l~i~~~~~~~~~~~~ 110 (816)
T 3dmk_A 35 DQKGPVFLKEPTNRIDFSNSTGAEIECKAS--GNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEV 110 (816)
T ss_dssp -CEEEEEEECCCSEEEEETTTCEEEECEEE--EESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHH
T ss_pred ccCCCcEEeCCCCeEEEECCCCeEEEeeec--CCCCCEEEEEeCCCCCccCCCceEEEeeCC--cEEEcCCChHHccccc
Confidence 345688888877667889999999999998 68999999999 898887554433333333 79999998887
Q ss_pred -CeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccc
Q psy2166 136 -QGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLS 213 (805)
Q Consensus 136 -~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 213 (805)
+|.|+|.|.|..|.. +..+.|.+... +.+...+...
T Consensus 111 d~G~Y~C~a~n~~G~~~S~~~~v~~~~~-----------------------------------------~~~~~~~~~~- 148 (816)
T 3dmk_A 111 HAQVYACLARNQFGSIISRDVHVRAVVA-----------------------------------------QYYEADVNKE- 148 (816)
T ss_dssp HEEEEEEEEEETTEEEEEEEEEEEEECC-----------------------------------------CCCCCBCCCE-
T ss_pred cceEEEEEEecCcceEEccceEEEEEEc-----------------------------------------cccEEEEecc-
Confidence 899999999999976 33444544321 1122222222
Q ss_pred ccCCCceEEEEEEEeeCCCC--CeEEEEEECCEEcc-----CCCcEEEEEEcCeEEEEEcCCCCccc-EEEEEEEEcCCe
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ--TMTVEFLYNGKPIE-----ASHRIRTVHAFGMVVLEILGTKIEDT-GVYTCRATNKWG 285 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p--~~~i~W~k~g~~l~-----~~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~g 285 (805)
.+.+|+.+.|.|.+.. ..+ .+.+.|++++..+. ...++.+. .++ .|.|.+++.+|+ |.|+|.+.+...
T Consensus 149 ~v~~G~~v~L~C~~~~-~~~~~~~~v~W~~~~~~~~~~~~~~~~r~~~~-~~g--~L~I~~v~~~D~~g~Y~C~~~~~~~ 224 (816)
T 3dmk_A 149 HVIRGNSAVIKCLIPS-FVADFVEVVSWHTDEEENYFPGAEYDGKYLVL-PSG--ELHIREVGPEDGYKSYQCRTKHRLT 224 (816)
T ss_dssp EEETTSCEEECCBCCH-HHHTTEEEEEEEETTSCEECBSSCBTTTEEEC-TTS--CEEESSCCGGGSSCEEEEEEEETTT
T ss_pred eEecCceEEEEECCCc-cccccEEEEEEEecCceEeccccCCCceEEEe-cCc--eEEEecCChhhccceeEEEEeeeee
Confidence 3779999999997631 222 27999999886543 23454432 223 699999999999 999999997543
Q ss_pred e-EE---EEEEEEEeccCCCCCCeEEecCC-CcccccCCCeEEEEEEEeecCCCCcEEEEEECCEE------ccCCCceE
Q psy2166 286 Q-AE---ISVNLECVDKSKGQPPKFTSHIK-SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP------IFHKNRVK 354 (805)
Q Consensus 286 ~-~~---~~~~l~v~~~~~~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~------l~~~~~~~ 354 (805)
. .. ....+.+.......+|.+..... ....+..|+.++|.|.+. +.|.+.+.|+|++.. +....+..
T Consensus 225 ~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~ 302 (816)
T 3dmk_A 225 GETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQ--GYPVPVFRWYKFIEGTTRKQAVVLNDRVK 302 (816)
T ss_dssp CCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEEEECTTSCEEECCCCB--CSSCCEEEEEEECTTSSCEEECCCSSSEE
T ss_pred eeeeecccccceEEeCCCCCCCCccccccCccceEEeCCCeEEEEEEee--ecCCCeEEEEeCCCCCccCcceecCCceE
Confidence 2 21 12345554433223455433221 123378999999999997 889999999995432 21222322
Q ss_pred EEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCccc
Q psy2166 355 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVA 434 (805)
Q Consensus 355 ~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (805)
...+ .|.|.++..+|+|.|+|.|.|..|.....+.|.|..++...... . ......+....+.|....
T Consensus 303 --~~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~---~------~~~v~~G~~v~l~C~~~g 369 (816)
T 3dmk_A 303 --QVSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDP---P------TQTVDFGRPAVFTCQYTG 369 (816)
T ss_dssp --EETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEES---S------EEECCTTSCEEEEEEEEE
T ss_pred --eccc--eEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCC---C------ceEecCCCCEEEEEEEec
Confidence 2223 69999999999999999999999988888888887654332211 0 122334555666666554
Q ss_pred CCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCC-CCCCCceEecCCCcccccCCCe
Q psy2166 435 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAP-VAEAPKFITQISDVTQLKEGQS 513 (805)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~P~~~~~~~~~~~v~~G~~ 513 (805)
.+...+.|+.+...+..+........+...+.+.|.|.+.+....... .....+. ...+|.+...+.... +.+|+.
T Consensus 370 ~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~~~~~p~i~~~~~~~~-v~~G~~ 446 (816)
T 3dmk_A 370 NPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEA--SAELKLGGRFDPPVIRQAFQEET-MEPGPS 446 (816)
T ss_dssp ECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEE--CCEEECCCSSCCCEEEEECCCEE-ECSSSC
T ss_pred cCCCEEEEEECCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEE--EEEEEEccccCCCceEecCcceE-EcCCCC
Confidence 455567787766666555444334456778889999999876432211 1111121 246777776665554 899999
Q ss_pred EEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEe-----eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 514 AHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFH-----DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 514 v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
++|.|.+. |.|.+.++|+++|..+..+.++.... ....+.|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 447 v~L~C~~~--g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 524 (816)
T 3dmk_A 447 VFLKCVAG--GNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNV 524 (816)
T ss_dssp EEEEEEEE--CSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEe--cCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEE
Confidence 99999998 78899999999999998877765422 123457999999999999999999999999999999999
Q ss_pred eeeeee--------------eec-----CCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCC-CCCcEEEEEEEEe
Q psy2166 589 VSKTNL--------------ILE-----SQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCY-EENSGVYECRATN 648 (805)
Q Consensus 589 ~~~~~~--------------~~~-----~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n 648 (805)
...+.+ .+. .|.+.+.|+++|..+..+.+..+..++ .|.|.++. .+|+|.|+|.|.|
T Consensus 525 ~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~l~i~~v~~~~d~G~Y~C~a~n 601 (816)
T 3dmk_A 525 YGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNG---TLIIENVERNSDQATYTCVAKN 601 (816)
T ss_dssp CSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTS---EEEESSCCHHHHCEEEEEEEEE
T ss_pred ecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCC---eEEEEecCccccCEEEEEEEEE
Confidence 766532 222 255689999999999877777665443 39999998 5899999999999
Q ss_pred CCcce-EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeee-cCCcccccCCCCeEEEEEEEeecCCCC-eE
Q psy2166 649 KYGSD-VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTS-EFQHLSNLSEGEIAHFEASLIPVGDQT-MT 725 (805)
Q Consensus 649 ~~g~~-~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~-~~~~~~~v~~G~~~~l~C~~~~~g~p~-~~ 725 (805)
..|.. ...+.|.|..+ |.+.. .+... .+.+|+.++|.|.+. +.|+ +.
T Consensus 602 ~~g~~~~~~~~v~v~~~---------------------------p~~~~~~~~~~-~~~~G~~v~L~C~~~--~~~~~~~ 651 (816)
T 3dmk_A 602 QEGYSARGSLEVQVMVL---------------------------PRIIPFAFEEG-PAQVGQYLTLHCSVP--GGDLPLN 651 (816)
T ss_dssp SSSCEEEEEEEEEEECC---------------------------CCCBCCCCCSS-CEESSCEEEEEEBCC--CSSSCCE
T ss_pred CCCceeeeeEEEEEecC---------------------------Ccccccccccc-ccCCCCeEEEEEEEe--CCCCCCE
Confidence 99864 34667777643 33322 23344 788999999999997 5554 59
Q ss_pred EEEEECCEEccCCCCeEEEee-CcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEeC-------------CCc
Q psy2166 726 VEFLYNGKPIEASHRIRTVHA-FGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWS-------------PSQ 791 (805)
Q Consensus 726 v~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~-------------~~~ 791 (805)
|+|+++|+.+..+.++.+... .....|.|.++..+|+|.|+|.|.|.+|....++.|.|..+| ...
T Consensus 652 i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~ 731 (816)
T 3dmk_A 652 IDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSD 731 (816)
T ss_dssp EEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCC
T ss_pred EEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCc
Confidence 999999999987766655433 456789999999999999999999999999999999998653 134
Q ss_pred ceEEEeecccCCC
Q psy2166 792 TKLVYSLFEVPQP 804 (805)
Q Consensus 792 ~~~~~~~~~~~~~ 804 (805)
..+.|.+.+.|.|
T Consensus 732 v~l~C~~~g~P~p 744 (816)
T 3dmk_A 732 AKVECKADGFPKP 744 (816)
T ss_dssp EEEECEEEEESCC
T ss_pred EEEEEEEecCCCC
Confidence 6788988888887
No 6
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=4.2e-57 Score=521.36 Aligned_cols=520 Identities=18% Similarity=0.274 Sum_probs=390.1
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCC-------------------CCceEEEecCcEEEEEEcccccCC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLEL-------------------GSRFKTTADFGFVTLDLTEVYDRD 135 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~-------------------~~~~~~~~~~~~~~L~I~~~~~~D 135 (805)
.+.+.+|+.++|.|... +.+.+.|.|+|+...... .+|+.+..+ .+|.|.+++.+|
T Consensus 8 ~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~---~sL~I~~v~~~D 82 (642)
T 1e07_A 8 PFNVAEGKEVLLLVHNL--PQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN---ASLLIQNIIQND 82 (642)
T ss_pred CCcccccccEEEEEccC--CCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeeccC---CcEEECCCCccc
Confidence 57899999999999976 456779999994422111 112222222 279999999999
Q ss_pred CeEEEEEEEeC-CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 136 QGIYTCRAWNL-AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 136 ~G~Y~C~a~n~-~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
+|.|+|.+.+. .+.......|.|...+ .+|.+..... ..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~i~~~~~--~~ 122 (642)
T 1e07_A 83 TGFYTLHVIKSDLVNEEATGQFRVYPEL--------------------------------------PKPSISSNNS--KP 122 (642)
T ss_pred CcEEEEEEEcCCCeEEEEEEEEEecccC--------------------------------------CCCcEEccCc--ee
Confidence 99999999986 3444566667775422 2344443221 23
Q ss_pred cCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeE-EEEEEE
Q psy2166 215 LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA-EISVNL 293 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l 293 (805)
+.+|+.+.|.|.+ .+ |.+.+.|+++|..+....++.+... ...|.|.+++.+|+|.|+|.|.|..+.. +..+.|
T Consensus 123 v~~g~~v~l~C~~--~~-p~~~v~W~~~g~~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l 197 (642)
T 1e07_A 123 VEDKDAVAFTCEP--ET-QDATYLWWVNNQSLPVSPRLQLSNG--NRTLTLFNVTRNDTASYKCETQNPVSARRSDSVIL 197 (642)
T ss_pred EecCCcEEEEEEC--CC-CCeeEEEEECCeECCCCCceEEcCC--CCEEEEeCCCcccCeeEEEEEecCCCCcccceEEE
Confidence 6789999999998 55 8899999999999987776654433 3589999999999999999999987754 455677
Q ss_pred EEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCC
Q psy2166 294 ECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHD 373 (805)
Q Consensus 294 ~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d 373 (805)
.|... |+.+...+.... +.+|+.++|.|.+. +.|.+.+.|+++|..+... ..|.|.++..+|
T Consensus 198 ~V~~~----p~~~~~~~~~~~-~~~G~~~~l~C~~~--g~p~~~i~W~~~g~~i~~~-----------~~L~i~~~~~~d 259 (642)
T 1e07_A 198 NVLYG----PDAPTISPLNTS-YRSGENLNLSCHAA--SNPPAQYSWFVNGTFQQST-----------QELFIPNITVNN 259 (642)
T ss_pred EEEeC----CCCcEEecCCcc-cccCCEEEEEEEcC--CCCCcEEEEEECCeEcccC-----------CceEEecccccC
Confidence 77642 222233333333 78999999999996 8999999999999988432 248899999999
Q ss_pred ceEEEEEEEeCceeeEEEE--EEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecC
Q psy2166 374 SGEYVCRAWNKYGEDFTRA--TIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKE 451 (805)
Q Consensus 374 ~G~Y~C~a~n~~g~~~~~~--~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (805)
+|.|+|.|.|..|....+. .|.|..++
T Consensus 260 ~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~--------------------------------------------------- 288 (642)
T 1e07_A 260 SGSYTCQAHNSDTGLNRTTVTTITVYAEP--------------------------------------------------- 288 (642)
T ss_pred CeEEEEEEEeCCCceEEeeeEEEEEEccC---------------------------------------------------
Confidence 9999999999988765543 44443211
Q ss_pred CceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEE
Q psy2166 452 GQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVE 531 (805)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~ 531 (805)
.+|.+. ......+..|+.+.|.|.+. +.| +.++
T Consensus 289 ------------------------------------------~~p~i~--~~~~~~~~~g~~v~l~C~~~--~~p-~~v~ 321 (642)
T 1e07_A 289 ------------------------------------------PKPFIT--SNNSNPVEDEDAVALTCEPE--IQN-TTYL 321 (642)
T ss_pred ------------------------------------------CCCEEE--cCCceeEecCCcEEEEEECC--CCC-ccEE
Confidence 122222 22223366789999999998 555 6999
Q ss_pred EEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcce-EEEEEEEEeeeeee----------------
Q psy2166 532 WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD-VTKASLKCVSKTNL---------------- 594 (805)
Q Consensus 532 W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~---------------- 594 (805)
|+|||+.+..+.++.+..+++ .|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...|..
T Consensus 322 W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~ 399 (642)
T 1e07_A 322 WWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNL 399 (642)
T ss_pred EEECCccCCCcCCEEEeCCCC--EEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcE
Confidence 999999998877777655443 69999999999999999999999875 45577877754421
Q ss_pred ee-----cCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEE--EEeecccc
Q psy2166 595 IL-----ESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL--KCVSKTNL 667 (805)
Q Consensus 595 ~~-----~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l--~V~~~p~~ 667 (805)
.+ +.|.|.++|+++|..+..+. .|.|.++..+|+|.|+|.|.|..|....+..+ .|...+
T Consensus 400 ~l~C~~~g~p~~~i~W~~~g~~~~~~~-----------~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~-- 466 (642)
T 1e07_A 400 SLSCHAASNPPAQYSWLIDGNIQQHTQ-----------ELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAEL-- 466 (642)
T ss_pred EEEEEcCccCCCeEEEEECCEEcCCCc-----------eEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccC--
Confidence 12 23677999999999886432 39999999999999999999999887766444 444321
Q ss_pred ccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeC
Q psy2166 668 ILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF 747 (805)
Q Consensus 668 ~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~ 747 (805)
.+|.|.. ..+. .+.+|+.++|.|.+. + |.+.++|+|+|..+..+.++.+..++
T Consensus 467 ----------------------~~p~i~~-~~~~-~v~~g~~v~l~C~~~--~-~~~~i~W~~~g~~l~~~~~~~~~~~~ 519 (642)
T 1e07_A 467 ----------------------PKPSISS-NNSK-PVEDKDAVAFTCEPE--A-QNTTYLWWVNGQSLPVSPRLQLSNGN 519 (642)
T ss_pred ----------------------CCceEec-CCce-eecCCCeEEEEEECC--C-CCcEEEEEECCEeCCCCCcEEEcCCC
Confidence 3566554 3345 789999999999997 5 88999999999999988888766554
Q ss_pred cEEEEEEcCCCCCCCEEEEEEEEcCCccEEE-EEEEEEEEeCCC--------------cceEEEeecccCCC
Q psy2166 748 GMVVLEILGTKIEDTGVYTCRATNKWGQAEI-SVNLECVVWSPS--------------QTKLVYSLFEVPQP 804 (805)
Q Consensus 748 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~~l~V~~~~~~--------------~~~~~~~~~~~~~~ 804 (805)
+ .|.|.++..+|+|.|+|.|.|..|.... ++.|.|...|+. ...|.|.+.+.|.|
T Consensus 520 ~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 589 (642)
T 1e07_A 520 R--TLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSP 589 (642)
T ss_pred c--EEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCC
Confidence 4 7999999999999999999999997654 689999865542 35788888888776
No 7
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=1e-59 Score=556.33 Aligned_cols=588 Identities=17% Similarity=0.216 Sum_probs=123.7
Q ss_pred EEEEEEEEecCCce-ec-cc-------cCC-----CCc-hhhhhHHhhhhhhcCccccCCCCCC-------CCc-CCCeE
Q psy2166 12 TTSGTLKCLGQKDI-YL-ET-------QHP-----MGA-AGLEKVQEVEHALAGKYQRQPSGPE-------ETF-AKPVF 68 (805)
Q Consensus 12 ~~~~~l~~~~~~~~-~~-~~-------~~~-----~~~-~g~~~i~~~~~~d~g~y~c~~~~~~-------~~~-~~p~~ 68 (805)
..+++|.|.+...+ |. .. ... .+. .+.+.|.+++.+|+|.|+|.+.... .+. ..+.+
T Consensus 46 G~~vtL~C~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~d~G~Y~C~~~~~~~~~~~~v~v~~~~~~~ 125 (772)
T 3v2a_R 46 NTTLQITCRGQRDLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPF 125 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEeccCCeeeeCCCCCCccCCceeEEEcCCCcEEEEEEECCCcHhhCEeEEEEEcCCCEEEEEEEEECCCCCCc
Confidence 46789999887643 21 11 000 111 3467899999999999999765221 111 11112
Q ss_pred Ee---cCCCCceecCC--CcEEEEEEEecCCCCCceEEEEEC--CEecCCCC-ceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 69 IV---PLKPEFKLGEA--QPLHLEAQVEPKNDPNLKIEWIFN--GKPLELGS-RFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 69 ~~---~~~~~~~v~~G--~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
+. ..+..+.+.+| +.++|.|.+. .|.+.|+|+|+ +..+.... .+...... .|.|.+++.+|+|.|+
T Consensus 126 ~~~~~~~~~~~~v~~G~~~~v~L~C~~~---~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~---~l~i~~~~~~d~G~Y~ 199 (772)
T 3v2a_R 126 IASVSDQHGVVYITENKNKTVVIPCLGS---ISNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVF 199 (772)
T ss_dssp ------CEEEEEEESSCCCEEEECCCCS---CSSCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEE
T ss_pred eEcCcccceeEEEecCCCCeEEEEccCC---CCCcEEEEEecCCCccccCCCceeecCCCC---CeEecCCChhhCeEEE
Confidence 11 12234678889 8899999997 47789999997 66655443 33332222 6999999999999999
Q ss_pred EEEEeCCeeEEEE-EEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 141 CRAWNLAGETFTS-TTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 141 C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
|.+.+..+..... ..+.+... .+|.+...+.....+.+|+
T Consensus 200 C~~~~~~~~~~s~~~~~~v~~~---------------------------------------~~~~v~~~~~~~~~v~~G~ 240 (772)
T 3v2a_R 200 CEAKINDESYQSIMYIVVVVGY---------------------------------------RIYDVVLSPSHGIELSVGE 240 (772)
T ss_dssp EEEEETTEEEECCEEEEEEECC---------------------------------------CEEEEEEECCSCEEEETTC
T ss_pred EEEEECCceEEEEEEEEEEecC---------------------------------------ccceeeeCCCCceEEecCC
Confidence 9999875543332 22333211 1233333333323478999
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE--------EEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEE
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT--------VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISV 291 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~--------~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 291 (805)
.++|.|.+.....+.+.+.|++++..+........ ........|.|.+++.+|+|.|+|.+.|..+..+..+
T Consensus 241 ~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 320 (772)
T 3v2a_R 241 KLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNST 320 (772)
T ss_dssp CEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEE
T ss_pred cEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEE
Confidence 99999999644466789999999987655433221 1112346899999999999999999999988888888
Q ss_pred EEEEeccCCCCCCeEEecC--CCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEccc
Q psy2166 292 NLECVDKSKGQPPKFTSHI--KSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYV 369 (805)
Q Consensus 292 ~l~v~~~~~~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v 369 (805)
.|.|.. +|.+.... .....+.+|+.++|.|.+. +.|.+.+.|+++|..+.....+. ....|.|.++
T Consensus 321 ~l~V~~-----~p~~~~~~~~~~~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~g~~l~~~~~~~-----~~~~L~i~~v 388 (772)
T 3v2a_R 321 FVRVHE-----KPFVAFGSGMESLVEATVGERVRIPAKYL--GYPPPEIKWYKNGIPLESNHTIK-----AGHVLTIMEV 388 (772)
T ss_dssp EEEEEC-----CCC------------------------------------------------------------------
T ss_pred EEEEeC-----CCeeEeccCCCCcEEEcCCCcEEEEEEEe--eeCCCeEEEEECCEeCCCCceEc-----cceeEEEecC
Confidence 888874 34333222 2223478999999999997 78889999999999886533221 2346999999
Q ss_pred CcCCceEEEEEEEeCceeeEEEE--EEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeeccee
Q psy2166 370 QSHDSGEYVCRAWNKYGEDFTRA--TIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVT 447 (805)
Q Consensus 370 ~~~d~G~Y~C~a~n~~g~~~~~~--~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (805)
..+|+|.|+|.|.|..|....+. .|.|.
T Consensus 389 ~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~-------------------------------------------------- 418 (772)
T 3v2a_R 389 SERDTGNYTVILTNPISKEKQSHVVSLVVY-------------------------------------------------- 418 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChhcCceEEEEEEECCcCeEEEEEEEEEEe--------------------------------------------------
Confidence 99999999999999988765443 34332
Q ss_pred eecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEec---CCCcccccCCCeEEEEEEEeeCC
Q psy2166 448 QLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQ---ISDVTQLKEGQSAHFEARLTPVT 524 (805)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~---~~~~~~v~~G~~v~L~C~v~~~g 524 (805)
.+|.+... .+.. .+.+|+.++|.|.+. +
T Consensus 419 ----------------------------------------------~~P~~~~~~~~~~~~-~~~~g~~~~l~C~~~--g 449 (772)
T 3v2a_R 419 ----------------------------------------------VPPQIGEKSLISPVD-SYQYGTTQTLTCTVY--A 449 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------cCCcccccccCCCcc-ccCCCCcEEEEeEec--c
Confidence 33333221 1111 278999999999998 6
Q ss_pred CCCcE-EEEEECCEE--------------------------------ccC-CCceEEEee--CCEEEEEEccCCCCCCEE
Q psy2166 525 DPDLV-VEWFYNGKK--------------------------------LPH-GHRYRTFHD--FGIVILDILYCYEENSGV 568 (805)
Q Consensus 525 ~p~~~-v~W~~~g~~--------------------------------l~~-~~~~~~~~~--~~~~~L~i~~v~~~d~G~ 568 (805)
.|.|. ++|++++.. +.. ..+..+... .....|.|.++ +|+|.
T Consensus 450 ~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~ 527 (772)
T 3v2a_R 450 IPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSAL 527 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeE
Confidence 78886 999997432 111 011111111 12346888765 79999
Q ss_pred EEEEEEcCCcceEEEEEEEEeeeeeeee--------------c-----CCCCeEEEEECCEEccCCCceEE---------
Q psy2166 569 YECRATNKYGSDVTKASLKCVSKTNLIL--------------E-----SQLPEVEWFYNGKKLPHGHRYRT--------- 620 (805)
Q Consensus 569 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~--------------~-----~~~p~v~W~~~g~~l~~~~~~~~--------- 620 (805)
|+|.|.|..|.....+.|.|..++.+.+ . .|.|.+.|+|+|..+........
T Consensus 528 Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~ 607 (772)
T 3v2a_R 528 YKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLD 607 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCccccccccccc
Confidence 9999999999998888888876554322 2 24579999999876643322111
Q ss_pred -----------EeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEE--EEEEEEeeccccccccccccccCCCCCCCCCC
Q psy2166 621 -----------FHDFGIVILDILYCYEENSGVYECRATNKYGSDVT--KASLKCVSKTNLILESQLPELRRQPAGVPDSE 687 (805)
Q Consensus 621 -----------~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~ 687 (805)
...++...|.|.++..+|+|.|+|.|.|..|.... ...|.|..
T Consensus 608 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~------------------------ 663 (772)
T 3v2a_R 608 TLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLE------------------------ 663 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccc------------------------
Confidence 11223456999999999999999999997655442 34555532
Q ss_pred CCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 688 DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 688 ~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
..+|.|...+.+. .+.+|+.++|.|.+. |.|.|.|+|+|||..+..+.++.+..+. .+|.|.++..+|+|.|+|
T Consensus 664 -~~~P~~~~~~~~~-~v~~g~~~~l~C~~~--g~P~p~v~W~k~g~~l~~~~~~~~~~~~--~~L~I~~v~~~D~G~Y~C 737 (772)
T 3v2a_R 664 -RVAPTITGNLENQ-TTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGN--RNLTIRRVRKEDEGLYTC 737 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cCCCEeecCCCce-EEeCCCCEEEEEEeC--ccCCCeEEEEECCeECcCCCCeEEcCCC--cEEEECcCCHHHCEEEEE
Confidence 1578888888887 999999999999998 9999999999999999888776654433 489999999999999999
Q ss_pred EEEcCCccEEEEEEEEEEEe
Q psy2166 768 RATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~~~ 787 (805)
.|.|.+|.+..++.|+|...
T Consensus 738 ~a~N~~G~~~~~~~l~V~~~ 757 (772)
T 3v2a_R 738 QACSVLGCAKVEAFFIIEGA 757 (772)
T ss_dssp --------------------
T ss_pred EEEeCCcceeEEEEEEEECC
Confidence 99999999999999999764
No 8
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2e-48 Score=444.00 Aligned_cols=468 Identities=14% Similarity=0.136 Sum_probs=331.4
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCC---ceEEEEECCEecC--------------CCCceEEEe--cCcEEEEEEcccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPN---LKIEWIFNGKPLE--------------LGSRFKTTA--DFGFVTLDLTEVY 132 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~---~~v~W~k~g~~i~--------------~~~~~~~~~--~~~~~~L~I~~~~ 132 (805)
.+..+.+.+|+.++|.|.+. +.+. +.|.|+|++..+. ..+|+.+.. +++.++|.|.+++
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~ 83 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYP--PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLS 83 (585)
T ss_pred CcceeEEecCCcEEEEEeCC--CCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCC
Confidence 34467899999999999998 3443 4899999986431 234666654 4567789999999
Q ss_pred cCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccc
Q psy2166 133 DRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHL 212 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 212 (805)
.+|+|.|+|.|.|..+.....+.|.|..++ .|...+...
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p-----------------------------------------~~~~~~~~~ 122 (585)
T 2ocw_A 84 QDDSGRYKCGLGINSRGLSFDVSLEVSQGP-----------------------------------------GLLNDTKVY 122 (585)
T ss_pred cccCEEEEEEcccCCCCceEEEEEEEecCc-----------------------------------------cccCCCccE
Confidence 999999999999988877777788876443 333333333
Q ss_pred cccCCCceEEEEEEEeeCCCCCeEEEEEECCEEcc----C---------CCcEEEEEEc---CeEEEEEcCCCCcccEEE
Q psy2166 213 SNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE----A---------SHRIRTVHAF---GMVVLEILGTKIEDTGVY 276 (805)
Q Consensus 213 ~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~----~---------~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 276 (805)
.+.+|+.+.|.|.+. .+.|.+.+.|+|++..+. . ..++.+...+ +...|.|.+++.+|+|.|
T Consensus 123 -~v~~G~~v~l~C~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 200 (585)
T 2ocw_A 123 -TVDLGRTVTINCPFK-TENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQY 200 (585)
T ss_pred -EEEcCCCEEEEEEec-CCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEE
Confidence 478999999999984 245567899999876421 1 2333333322 245899999999999999
Q ss_pred EEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC-cEEEEE-ECCEE---c-c--
Q psy2166 277 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-LKVEWF-HNGKP---I-F-- 348 (805)
Q Consensus 277 ~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~~v~W~-~~g~~---l-~-- 348 (805)
+|.|.|..+.....+.|.|.. .+|.. ..+.+|+.+.|.|.+. ...|. +.+.|+ ++|.. + .
T Consensus 201 ~C~a~n~~g~~~~~~~l~V~~----~~p~~-------~~~~~G~~v~l~C~~~-~~~~~~~~~~w~~~~g~~~~~~~~~~ 268 (585)
T 2ocw_A 201 LCQAGDDSNSNKKNADLQVLK----PEPEL-------VYEDLRGSVTFHCALG-PEVANVAKFLCRQSSGENCDVVVNTL 268 (585)
T ss_pred EEEeccCCccccceEEEEEcc----CCCce-------eEEcCCCcEEEEEEcC-CCCCCceEEEEEeCCCCCcceEEeCC
Confidence 999999999888888888864 22222 1267899999999973 23333 789996 88832 1 1
Q ss_pred ------CCCceEEEEe--CcEEEEEEcccCcCCceEEEEEEEeCceeeE----EEEEEEEEecccccccCCChhHHHHHH
Q psy2166 349 ------HKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCRAWNKYGEDF----TRATIKCFGKGGVYLDSLQPESLARIR 416 (805)
Q Consensus 349 ------~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~----~~~~l~V~~~~~~~~~~~~p~~~~~~~ 416 (805)
...++.+... .+.+.|.|.++..+|+|.|+|.|.|..+... ..+.|.|..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~------------------ 330 (585)
T 2ocw_A 269 GKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNE------------------ 330 (585)
T ss_pred CcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEec------------------
Confidence 1234444332 4555799999999999999999999533331 566666643
Q ss_pred HhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCC
Q psy2166 417 ELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAP 496 (805)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P 496 (805)
+|
T Consensus 331 ------------------------------------------------------------------------------~p 332 (585)
T 2ocw_A 331 ------------------------------------------------------------------------------ES 332 (585)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 33
Q ss_pred ceEecCCCcccccCCCeEEEEEEEeeCCCCCcEE----EEEE--CCE--EccCCCceEEEeeCCEEEEEEccCCCCCCEE
Q psy2166 497 KFITQISDVTQLKEGQSAHFEARLTPVTDPDLVV----EWFY--NGK--KLPHGHRYRTFHDFGIVILDILYCYEENSGV 568 (805)
Q Consensus 497 ~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v----~W~~--~g~--~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 568 (805)
.+...+... .+.+|+.++|.|.+. +.|.+.+ +|+| ||. .+...... + .
T Consensus 333 ~~~~~~~~~-~~~~G~~v~l~C~~~--~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~----------~-----~------ 388 (585)
T 2ocw_A 333 TIPRSPTVV-KGVAGSSVAVLCPYN--RKESKSIKYWCLWEGAQNGRCPLLVDSEGW----------V-----K------ 388 (585)
T ss_pred ccccCCcce-EEEeCCcEEEEEecC--CCCCccEEEEEEEEccCCCCCceeeeecce----------e-----e------
Confidence 333333333 378999999999998 6777766 7999 776 33221000 0 0
Q ss_pred EEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEe--eCCEEEEEeccCCCCCcEEEEEEE
Q psy2166 569 YECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFH--DFGIVILDILYCYEENSGVYECRA 646 (805)
Q Consensus 569 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a 646 (805)
.....++.+.. .++...|.|.++..+|+|.|+|.|
T Consensus 389 -------------------------------------------~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a 425 (585)
T 2ocw_A 389 -------------------------------------------AQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT 425 (585)
T ss_pred -------------------------------------------cccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc
Confidence 00111122211 123445999999999999999999
Q ss_pred EeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeec--CCCCe
Q psy2166 647 TNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPV--GDQTM 724 (805)
Q Consensus 647 ~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~--g~p~~ 724 (805)
|..|.....+.|.|.. .+|.+.. +.+. .+.+|+.+.|.|.+... |.|.+
T Consensus 426 -n~~g~~~~~~~l~V~~--------------------------~~p~~~~-~~~~-~v~~G~~v~L~C~~~~~~~~~p~~ 476 (585)
T 2ocw_A 426 -NGDTLWRTTVEIKIIE--------------------------GEPNLKV-PGNV-TAVLGETLKVPCHFPCKFSSYEKY 476 (585)
T ss_pred -cCCCccceeEEEEEec--------------------------Ccccccc-CCce-eEecCCcEEEEEEecCCCCCCccE
Confidence 9999998999999975 3444443 5566 89999999999999521 67889
Q ss_pred EEEEEECCEEccCCCC------e-EEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEE-EEEEEEEEeC
Q psy2166 725 TVEFLYNGKPIEASHR------I-RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI-SVNLECVVWS 788 (805)
Q Consensus 725 ~v~W~~~g~~l~~~~~------~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~~l~V~~~~ 788 (805)
.|+|+|+|..+..... + .+..++....|.|.++..+|+|.|+|.|.|.+|.... ++.|.|...|
T Consensus 477 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 477 WCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 9999999988765421 2 2222344578999999999999999999999996654 4889998765
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=4.7e-50 Score=450.72 Aligned_cols=455 Identities=14% Similarity=0.143 Sum_probs=311.5
Q ss_pred CCCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEE
Q psy2166 60 EETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIY 139 (805)
Q Consensus 60 ~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 139 (805)
..+..+|.+... ++.+.+.+|+.++|.|.+. + .|+|+|++..+. .++...+|.|.+++.+|+|.|
T Consensus 31 l~v~~pP~i~~~-~~~~~v~~G~~v~l~C~~~--~----~v~W~~~~~~~~--------~~~~~~~L~I~~~~~~D~G~Y 95 (524)
T 2ec8_A 31 PGEPSPPSIHPG-KSDLIVRVGDEIRLLCTDP--G----FVKWTFEILDET--------NENKQNEWITEKAEATNTGKY 95 (524)
T ss_dssp --CCCCCEEESC-CSEEECCTTSCEEEEEECT--T----EEEEEEESSSCC--------EEECSSEEEESSCCSTTCEEE
T ss_pred cCCCCCCccCCC-CceEEEeCCCeEEEEEeCC--c----eEEEcCCCcccc--------ccCccceEEEcccchhhCEEE
Confidence 344566766543 3478899999999999987 3 899999998762 112233899999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 140 TCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 140 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
+|.|.| |. .....|.|..++ .+...+... .+.+|+
T Consensus 96 ~C~a~n--g~-~~~~~l~V~~p~-----------------------------------------~~~~~~~~~-~v~~G~ 130 (524)
T 2ec8_A 96 TCTNKH--GL-SNSIYVFVRDPA-----------------------------------------KLFLVDRSL-YGKEDN 130 (524)
T ss_dssp EEEETT--SC-EEEEEEECCCSS-----------------------------------------CSBCCCCCC-CEETTS
T ss_pred EEeecC--Cc-ceEEEEEECCCC-----------------------------------------cccccccce-EEEcCC
Confidence 999998 43 555666664322 122222222 477999
Q ss_pred eEEEEEEEeeCCCCCeEEEEEE-CCEEccCCCcEEEEEEcCeEEEEEcCCCCcccE-EEEEEEEcCCeeEE-EEEEEEEe
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLY-NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTG-VYTCRATNKWGQAE-ISVNLECV 296 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~~n~~g~~~-~~~~l~v~ 296 (805)
.+.|.|.+ .+.+.+.+.||+ +|..+....++.... . ..|.|.+++.+|+| .|+|.+.|..+... ..+.|.|.
T Consensus 131 ~v~l~C~~--~~~~~~~v~W~~~~g~~l~~~~~~~~~~-~--~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 205 (524)
T 2ec8_A 131 DTLVRCPL--TDPEVTNYSLKGCQGKPLPKDLRFIPDP-K--AGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVR 205 (524)
T ss_dssp CEEECCCB--SCCCCSCEEEECSSSCCCCSSCEEEEET-T--TEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEE
T ss_pred eEEEECcC--CCCccceEEEEccCCcCcCCCCceeECC-C--ccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEE
Confidence 99999988 566678999998 888887666554332 2 26999999999999 99999998766542 35666665
Q ss_pred ccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcE-EEEEECCEEc--cCCCceEEE---EeCcEEEEEEcccC
Q psy2166 297 DKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELK-VEWFHNGKPI--FHKNRVKMV---SDFGFVVMDIAYVQ 370 (805)
Q Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~-v~W~~~g~~l--~~~~~~~~~---~~~~~~~l~i~~v~ 370 (805)
... ..+|.+...+.... +.+|+.++|.|.+. +.|.+. +.|++++..+ ....+..+. .......|.|.++.
T Consensus 206 ~~~-~~~p~i~~~~~~~~-v~~G~~v~L~C~~~--g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~ 281 (524)
T 2ec8_A 206 PAF-KAVPVVSVSKASYL-LREGEEFTVTCTIK--DVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSAR 281 (524)
T ss_dssp CCC-CSCCEEECSCSEEE-EETTSCEEEEEEEE--ESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCC
T ss_pred eCC-CCCCcEEecCCcce-EEcCCcEEEEEEEe--cCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCC
Confidence 211 15677776666554 88999999999998 667665 9999999874 322222221 11234579999999
Q ss_pred cCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeec
Q psy2166 371 SHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLK 450 (805)
Q Consensus 371 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (805)
.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 282 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~---------------------------------------------------- 309 (524)
T 2ec8_A 282 VNDSGVFMCYANNTFGSANVTTTLEVVD---------------------------------------------------- 309 (524)
T ss_dssp TTTCEEEEEEEECSSCEEEEEEEEEEES----------------------------------------------------
T ss_pred HHHCEEEEEEEEecCCceEEEEEEEEec----------------------------------------------------
Confidence 9999999999999999988888888753
Q ss_pred CCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCC--CcccccCCCeEEEEEEEeeCCCCCc
Q psy2166 451 EGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQIS--DVTQLKEGQSAHFEARLTPVTDPDL 528 (805)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~v~~G~~v~L~C~v~~~g~p~~ 528 (805)
+|.+...+. ....+.+|+.++|.|.+. |.|.|
T Consensus 310 --------------------------------------------~p~~~~~~~~~~~~~v~~G~~v~l~C~~~--g~P~p 343 (524)
T 2ec8_A 310 --------------------------------------------KGFINIFPMINTTVFVNDGENVDLIVEYE--AFPKP 343 (524)
T ss_dssp --------------------------------------------SCEEEEEESSCSEEEECTTCCEEEEEEEE--EESCC
T ss_pred --------------------------------------------cCceEeecCCCceEEEcCCCcEEEEEEEe--ecCCC
Confidence 333433322 233489999999999998 66777
Q ss_pred E-EEEEECCEEccCCC-ceEEEeeC----CEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCe
Q psy2166 529 V-VEWFYNGKKLPHGH-RYRTFHDF----GIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPE 602 (805)
Q Consensus 529 ~-v~W~~~g~~l~~~~-~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~ 602 (805)
. ++|+|+|..+.... ++....++ ....|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+|.+
T Consensus 344 ~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i-------- 415 (524)
T 2ec8_A 344 EHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEI-------- 415 (524)
T ss_dssp CEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEE--------
T ss_pred cEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeE--------
Confidence 8 99999999987654 34333333 3567999999999999999999998888777777777554431
Q ss_pred EEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCC
Q psy2166 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAG 682 (805)
Q Consensus 603 v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~ 682 (805)
T Consensus 416 -------------------------------------------------------------------------------- 415 (524)
T 2ec8_A 416 -------------------------------------------------------------------------------- 415 (524)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEcc-------C-CCC---eEEEeeCcEEE
Q psy2166 683 VPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE-------A-SHR---IRTVHAFGMVV 751 (805)
Q Consensus 683 ~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~-------~-~~~---~~~~~~~~~~~ 751 (805)
...+ .+.+| .|.|.+. |+|.|.|+|+|+|..+. . +.+ +....++....
T Consensus 416 ------------~~~~----~~~~g---~l~C~~~--g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 474 (524)
T 2ec8_A 416 ------------LTYD----RLVNG---MLQCVAA--GFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVV 474 (524)
T ss_dssp ------------EEEE----CCSSS---CEEEEEE--EESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEE
T ss_pred ------------eecc----cCcCc---EEEEEEE--eecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceE
Confidence 1100 12235 8999999 99999999999987652 1 111 11122222211
Q ss_pred -EEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEeCCC
Q psy2166 752 -LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 752 -L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
+.|.....+|+|.|+|.|.|.+|..+.++.|.|+.++..
T Consensus 475 ~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~~ 514 (524)
T 2ec8_A 475 QSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKE 514 (524)
T ss_dssp EEEECCCSCCC-----CEEECSSCEEECCCCCCC------
T ss_pred EEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCHH
Confidence 234444569999999999999999999999999875544
No 10
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=426.18 Aligned_cols=435 Identities=15% Similarity=0.146 Sum_probs=275.3
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTST 154 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 154 (805)
.++|.+|++++|.|.+. +.+...+.|++++..+....++... +.+..+|.|.+++.+|+|.|+|.|.|..+......
T Consensus 57 ~~~v~~g~~~~L~c~~~--~~~~~~~~W~~~~~~l~~~~~~~~~-~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~ 133 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILF 133 (527)
T ss_dssp EEEECSSCCEEEEEECS--CCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEE
T ss_pred eEEEeccccEEEEEEEe--cCCceeEEEEecCCccCcccccCCC-cceEEEEEECcCChhhCeeEEEEEEeccccEEEEE
Confidence 58999999999999998 5677899999999988766555432 23456799999999999999999999888777666
Q ss_pred EEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCC
Q psy2166 155 TIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT 234 (805)
Q Consensus 155 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~ 234 (805)
.|.|... .... ...|. ....|+.+.|.|.+ .|.|.
T Consensus 134 ~v~v~~~--~~~~--------------------------------~~~p~---------~~~~~~~~~L~C~a--~G~P~ 168 (527)
T 3qs9_E 134 TVSIRNT--LLYT--------------------------------LRRPY---------FRKMENQDALVCIS--ESVPE 168 (527)
T ss_dssp EEEEC-------C--------------------------------EEEEE---------EEECSSSSCEEEEE--EESSC
T ss_pred EEEECCc--eeec--------------------------------cCCCc---------EEecCCceEEEEEE--ceecC
Confidence 6665411 1000 00111 12346677899988 78999
Q ss_pred eEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEE-EEEEEeccCCCCCCeEEecCCCc
Q psy2166 235 MTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS-VNLECVDKSKGQPPKFTSHIKSL 313 (805)
Q Consensus 235 ~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v~~~~~~~~p~~~~~~~~~ 313 (805)
|.|.|++++..+..... ............+..+|+|.|+|.|.|..|..... +.+.|... |.+ .+. .
T Consensus 169 P~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~-----p~~--~p~-~ 236 (527)
T 3qs9_E 169 PIVEWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQT-----PQT--TLP-Q 236 (527)
T ss_dssp CEEEEEEC-----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSC-----CCC--SCC-E
T ss_pred CeEEEEECCCCCccccc----cCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEecc-----Ccc--CCC-c
Confidence 99999999876542211 11111122233445889999999999998887554 66666532 222 122 2
Q ss_pred ccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEE------eCcEEEEEEcccCcCCceEEEEEEEeCcee
Q psy2166 314 EGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS------DFGFVVMDIAYVQSHDSGEYVCRAWNKYGE 387 (805)
Q Consensus 314 ~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 387 (805)
..+.+|+.+.|.|.+.+ +.|.+.|+|+++|..+.....+.... ......|.|.++..+|+|.|+|.|.|.
T Consensus 237 ~~v~~G~~v~L~C~~~~-g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~--- 312 (527)
T 3qs9_E 237 LFLKVGEPLWIRCKAVH-VNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH--- 312 (527)
T ss_dssp EEECTTSCEEEEEEEEE-SSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---
T ss_pred eEEeCCCeEEEEEEEcc-CCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---
Confidence 33889999999999953 78999999999999886554332211 112346999999999999999999987
Q ss_pred eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCC
Q psy2166 388 DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP 467 (805)
Q Consensus 388 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (805)
....+.|.|..+
T Consensus 313 ~~~~~~L~V~~~-------------------------------------------------------------------- 324 (527)
T 3qs9_E 313 PSQSALVTIVEK-------------------------------------------------------------------- 324 (527)
T ss_dssp EEEEEEEEEC----------------------------------------------------------------------
T ss_pred CCceEEEEEEcc--------------------------------------------------------------------
Confidence 556667776432
Q ss_pred CceEEEeecccCCCCCCcccccCCCCCCCceEecC-CCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceE
Q psy2166 468 DLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQI-SDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYR 546 (805)
Q Consensus 468 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~ 546 (805)
|.+...+ .....+.+|+.+.|.|.+. |.|.|.|+|+|||+.|..+.++.
T Consensus 325 ----------------------------p~i~~~~~~~~~~v~~G~~v~L~C~~~--g~P~p~i~W~k~g~~l~~~~~~~ 374 (527)
T 3qs9_E 325 ----------------------------GFINATNSSEDYEIDQYEEFCFSVRFK--AYPQIRCTWTFSRKSFPCEQKGL 374 (527)
T ss_dssp ----------------------------CEEECCCSCCEECCCTTCCCCEEEEEE--EESCCEEEEEETTEEEECBCCBC
T ss_pred ----------------------------CccccccCcccEEEcCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCcccc
Confidence 3222221 1223478999999999999 67888999999999986554321
Q ss_pred EEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCE
Q psy2166 547 TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGI 626 (805)
Q Consensus 547 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~ 626 (805)
. ....|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 375 ~----~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~------------------------------------ 414 (527)
T 3qs9_E 375 D----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRR------------------------------------ 414 (527)
T ss_dssp S----SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--C------------------------------------
T ss_pred c----CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEec------------------------------------
Confidence 1 112355666666666666666666555555544444443
Q ss_pred EEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q psy2166 627 VILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 706 (805)
Q Consensus 627 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 706 (805)
+|.|...+.
T Consensus 415 ----------------------------------------------------------------~P~i~~~~~------- 423 (527)
T 3qs9_E 415 ----------------------------------------------------------------KPQVLAEAS------- 423 (527)
T ss_dssp ----------------------------------------------------------------CCEEEECCC-------
T ss_pred ----------------------------------------------------------------CCeEEEeCC-------
Confidence 333322211
Q ss_pred CCeEEEEEEEeecCCCCeEEEEEECCEEccCCCC-e----------EEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCcc
Q psy2166 707 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHR-I----------RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ 775 (805)
Q Consensus 707 G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~-~----------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 775 (805)
| ..|.|.+. |+|.|.|+|++++........ . ..........+.|.-...+|+|.|+|.|.|.+|.
T Consensus 424 ~--~~l~C~a~--g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~ 499 (527)
T 3qs9_E 424 A--SQASCFSD--GYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGT 499 (527)
T ss_dssp C--E---EEEE--CSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCE
T ss_pred C--CEEEEEEE--EEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCC
Confidence 1 24799999 999999999998754421110 0 0011111222333333456999999999999999
Q ss_pred EEEEEEEEEEE
Q psy2166 776 AEISVNLECVV 786 (805)
Q Consensus 776 ~~~~~~l~V~~ 786 (805)
.+..+.|.|..
T Consensus 500 ~~~~~~L~V~~ 510 (527)
T 3qs9_E 500 SCETILLNSPG 510 (527)
T ss_dssp EEEEEEC----
T ss_pred ceeEEEEecCC
Confidence 99999997743
No 11
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=7.6e-47 Score=424.47 Aligned_cols=467 Identities=14% Similarity=0.211 Sum_probs=310.3
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--EecC------------CCCceEEEecCcEEEEEEcccccCCCe
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPLE------------LGSRFKTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G 137 (805)
.++.+.+.+|+.++|.|.+. +.|.+.|.|+|++ ..+. ...|+....+++..+|.|.+++.+|+|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (523)
T 2rcj_C 6 QPPSASGTPGQRVTISCTGT--SSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDES 83 (523)
T ss_pred cCCceEEecCCcEEEEEEEe--ccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCE
Confidence 34467999999999999998 5788899999974 2211 135777666667789999999999999
Q ss_pred EEEEEEEeCCeeE---EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 138 IYTCRAWNLAGET---FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 138 ~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
.|+|.|.|..|.. ...+.|.|...+ ..+|.+...+... .
T Consensus 84 ~Y~C~a~n~~g~~~~~~~~~~l~V~~~~-------------------------------------~~~P~~~~~~~~~-~ 125 (523)
T 2rcj_C 84 DYYCASWNSSDNSYVFGTGTKVTVLGQP-------------------------------------KANPTVTLFPPSS-E 125 (523)
T ss_pred EEEEEEccCCCccccccCceEEEeccCC-------------------------------------CcCCeEEecCCcc-c
Confidence 9999999976532 234556664221 1345555444443 3
Q ss_pred cCCCceEEEEEEEeeCCCCC--eEEEEEECCEEccCCCcEEEE--EEcC----eEEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 215 LSEGEIAHFEASLIPVGDQT--MTVEFLYNGKPIEASHRIRTV--HAFG----MVVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~--~~i~W~k~g~~l~~~~~~~~~--~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
+.+|+.+.|.|.+ .+.|+ +.+.|+|+|..+.....+... ..++ .+.|.|.+++.+|+|.|+|.|.|..+.
T Consensus 126 ~~~g~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 203 (523)
T 2rcj_C 126 ELQANKATLVCLI--SDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 203 (523)
T ss_pred ccCCCceEEEEEe--ccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcc
Confidence 5689999999998 45543 599999999988755332211 1122 246999999999999999999998887
Q ss_pred EEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccCCCceEEEEeCc----E
Q psy2166 287 AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFHKNRVKMVSDFG----F 361 (805)
Q Consensus 287 ~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~----~ 361 (805)
....+.+.+... ...+|.+....... .+.+|+.+.|.|.+.+ ..|.+ .|+|+++|..+.......+...++ .
T Consensus 204 ~~~~~~~~~~~~-~~~~P~v~~~~~~~-~~~~G~~~~l~C~~~g-~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~ 280 (523)
T 2rcj_C 204 VEKTVAPTECSA-STKGPSVFPLAPSS-KSTSGGTAALGCLVKD-YFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLS 280 (523)
T ss_pred cccceeeeecCC-CCcCCEEEecCCCc-ccccCCceEEEEEEec-eeCCCeEEEEecCCcccceEeCCcEecCCCcEEEE
Confidence 666555433211 11455555333333 3678999999999973 23766 899999998764321111111112 2
Q ss_pred EEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceee
Q psy2166 362 VVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFIT 441 (805)
Q Consensus 362 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (805)
..|.|.++..+| |.|+|.|.|..|.......+.|.
T Consensus 281 s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~-------------------------------------------- 315 (523)
T 2rcj_C 281 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPL-------------------------------------------- 315 (523)
T ss_pred EEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCC--------------------------------------------
Confidence 469999999999 99999999999987665555432
Q ss_pred eecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcc-cccCCCeEEEEEEE
Q psy2166 442 QISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVT-QLKEGQSAHFEARL 520 (805)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~-~v~~G~~v~L~C~v 520 (805)
..|.+....+... .+.+|+.++|.|.+
T Consensus 316 ----------------------------------------------------~~P~~~~~~p~~~~~v~~g~~~~l~C~~ 343 (523)
T 2rcj_C 316 ----------------------------------------------------SLPSVFLFPPKPKDTLMISRTPEVTCVV 343 (523)
T ss_pred ----------------------------------------------------cCceEEecCCCchhhcccCCceEEEEEE
Confidence 2243333222222 27889999999999
Q ss_pred eeCC--CCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecC
Q psy2166 521 TPVT--DPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILES 598 (805)
Q Consensus 521 ~~~g--~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~ 598 (805)
.+.. .|.+.|+|+|||..+........ ...+.|.|..
T Consensus 344 ~g~~p~~~~~~v~W~k~g~~l~~~~~~~~--------------~~~~~g~~~~--------------------------- 382 (523)
T 2rcj_C 344 VDVSHEDPQVKFNWYVDGVQVHNAKTKPR--------------EQQYNSTYRV--------------------------- 382 (523)
T ss_pred ecccCCCCceEEEEEECCeEccCCccCCc--------------eecCCCcEEE---------------------------
Confidence 9422 12369999999998754421100 0011121111
Q ss_pred CCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccC
Q psy2166 599 QLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRR 678 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~ 678 (805)
...|.|.++..+|+|.|+|.|.|..+.......|.+...
T Consensus 383 ---------------------------~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~-------------- 421 (523)
T 2rcj_C 383 ---------------------------VSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKG-------------- 421 (523)
T ss_pred ---------------------------EEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccC--------------
Confidence 112777777888888888888888776655544443100
Q ss_pred CCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCe--EEEEEECCEEccCCCCeEE-EeeCc----EEE
Q psy2166 679 QPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM--TVEFLYNGKPIEASHRIRT-VHAFG----MVV 751 (805)
Q Consensus 679 ~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~--~v~W~~~g~~l~~~~~~~~-~~~~~----~~~ 751 (805)
...+|.+...+.....+..| .++|.|.+. |.|++ .|+|+|||+++........ ...++ ...
T Consensus 422 ---------~~~~P~v~~~~~~~~~~~~~-~~~l~C~~~--g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~ 489 (523)
T 2rcj_C 422 ---------QPREPQVYTLPPSREEMTKN-QVSLTCLVK--GFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK 489 (523)
T ss_pred ---------CCCCCEEEEeCCChHHccCC-ceEEEEEEE--eeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEE
Confidence 01567766654443134444 599999999 76655 9999999999875433222 12223 234
Q ss_pred EEEcCCCCCCCEEEEEEEEcCCc
Q psy2166 752 LEILGTKIEDTGVYTCRATNKWG 774 (805)
Q Consensus 752 L~i~~v~~~d~G~Y~C~a~N~~G 774 (805)
|.|.....+|+|.|+|.|.|..-
T Consensus 490 l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 490 LTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred EEEChHHccCCCeEEEEEEcCCc
Confidence 67777777899999999999764
No 12
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=2.7e-50 Score=475.80 Aligned_cols=551 Identities=16% Similarity=0.205 Sum_probs=120.3
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEe--c-CcEEEEEEcccccCCCeEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTA--D-FGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~--~-~~~~~L~I~~~~~~D~G~Y~ 140 (805)
.+|.+... ++...|.+|++|+|.|... + .+.|++++.......++.+.. + ....+|.|.+++.+|+|.|+
T Consensus 30 ~~p~l~~~-~~~~~v~~G~~vtL~C~~~--~----~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~d~G~Y~ 102 (772)
T 3v2a_R 30 DLPRLSIQ-KDILTIKANTTLQITCRGQ--R----DLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYK 102 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEECCC-CCeEEEcCCCCEEEEEecc--C----CeeeeCCCCCCccCCceeEEEcCCCcEEEEEEECCCcHhhCEeEE
Confidence 44554333 3367899999999999865 1 589998776555444554433 1 22458999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC--
Q psy2166 141 CRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG-- 218 (805)
Q Consensus 141 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g-- 218 (805)
|.+.+ +.......|.|..+.... .+.+...+.. ..+.+|
T Consensus 103 C~~~~--~~~~~~~~v~v~~~~~~~------------------------------------~~~~~~~~~~-~~v~~G~~ 143 (772)
T 3v2a_R 103 CFYRE--TDLASVIYVYVQDYRSPF------------------------------------IASVSDQHGV-VYITENKN 143 (772)
T ss_dssp -------------------------------------------------------------------CEEE-EEEESSCC
T ss_pred EEEcC--CCEEEEEEEEECCCCCCc------------------------------------eEcCccccee-EEEecCCC
Confidence 99972 223334444443221100 0000111112 236789
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEEC--CEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEE-EEEEE
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYN--GKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS-VNLEC 295 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v 295 (805)
+.++|.|.+ .+ |.+.+.|+++ |..+......... .....|.|.+++.+|+|.|+|.+.+........ ..+.+
T Consensus 144 ~~v~L~C~~--~~-p~~~v~w~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v 218 (772)
T 3v2a_R 144 KTVVIPCLG--SI-SNLNVSLCARYPEKRFVPDGNRISW--DSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVV 218 (772)
T ss_dssp CEEEECCCC--SC-SSCCEEEEEETTTEEECCCSSSCEE--ETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEE
T ss_pred CeEEEEccC--CC-CCcEEEEEecCCCccccCCCceeec--CCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEE
Confidence 899999987 33 7789999997 6655433221111 122469999999999999999999865443322 23333
Q ss_pred eccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE--------EeCcEEEEEEc
Q psy2166 296 VDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV--------SDFGFVVMDIA 367 (805)
Q Consensus 296 ~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~--------~~~~~~~l~i~ 367 (805)
... .++.+...+.....+.+|+.++|.|.+.+...+.+.+.|++++..+......... .......|.|.
T Consensus 219 ~~~---~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 295 (772)
T 3v2a_R 219 VGY---RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTID 295 (772)
T ss_dssp ECC---CEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEES
T ss_pred ecC---ccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEEC
Confidence 211 2334444444433488999999999998533667899999999876543322110 11234479999
Q ss_pred ccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeeccee
Q psy2166 368 YVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVT 447 (805)
Q Consensus 368 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (805)
++..+|+|.|+|.+.|..|.....+.|.|..+|
T Consensus 296 ~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p----------------------------------------------- 328 (772)
T 3v2a_R 296 GVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKP----------------------------------------------- 328 (772)
T ss_dssp SCCSTTCSEEEEEEECSSCEEEEEEEEEEECCC-----------------------------------------------
T ss_pred cCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCC-----------------------------------------------
Confidence 999999999999999999988888888876433
Q ss_pred eecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecC--CCcccccCCCeEEEEEEEeeCCC
Q psy2166 448 QLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQI--SDVTQLKEGQSAHFEARLTPVTD 525 (805)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~--~~~~~v~~G~~v~L~C~v~~~g~ 525 (805)
.+.... .....+.+|+.++|.|.+. +.
T Consensus 329 -------------------------------------------------~~~~~~~~~~~~~v~~G~~v~l~C~~~--~~ 357 (772)
T 3v2a_R 329 -------------------------------------------------FVAFGSGMESLVEATVGERVRIPAKYL--GY 357 (772)
T ss_dssp -------------------------------------------------C------------------------------
T ss_pred -------------------------------------------------eeEeccCCCCcEEEcCCCcEEEEEEEe--ee
Confidence 221111 1223378999999999999 67
Q ss_pred CCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceE--EEEEEEEeeeeeee--------
Q psy2166 526 PDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV--TKASLKCVSKTNLI-------- 595 (805)
Q Consensus 526 p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~~-------- 595 (805)
|.+.++|+|+|..+....++. ....|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.+.
T Consensus 358 p~~~v~W~~~g~~l~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~ 432 (772)
T 3v2a_R 358 PPPEIKWYKNGIPLESNHTIK-----AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPV 432 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCeEEEEECCEeCCCCceEc-----cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCc
Confidence 888999999999987643322 234699999999999999999999998764 45566666555431
Q ss_pred ----------ec-----CCCCe-EEEEECCEE--------------------------------ccC-CCceEEEee--C
Q psy2166 596 ----------LE-----SQLPE-VEWFYNGKK--------------------------------LPH-GHRYRTFHD--F 624 (805)
Q Consensus 596 ----------~~-----~~~p~-v~W~~~g~~--------------------------------l~~-~~~~~~~~~--~ 624 (805)
+. .|.|. +.|++++.. +.. ..++.+... .
T Consensus 433 ~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~ 512 (772)
T 3v2a_R 433 DSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNK 512 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcce
Confidence 11 24565 999997432 111 111111111 1
Q ss_pred CEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCccccc
Q psy2166 625 GIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNL 704 (805)
Q Consensus 625 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 704 (805)
....|.|.++ +|+|.|+|.|.|..|.....+.|.|.. +|.|...+. . .+
T Consensus 513 ~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~---------------------------~p~i~~~p~-~-~~ 561 (772)
T 3v2a_R 513 TVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTR---------------------------GPEITLQPD-M-QP 561 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEEC---------------------------CceeeccCC-c-cc
Confidence 1245777776 799999999999999999998888874 455554443 2 57
Q ss_pred CCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEE--------------------EeeCcEEEEEEcCCCCCCCEE
Q psy2166 705 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT--------------------VHAFGMVVLEILGTKIEDTGV 764 (805)
Q Consensus 705 ~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~--------------------~~~~~~~~L~i~~v~~~d~G~ 764 (805)
.+|+.+.|.|.+. |.|.+.|+|+|+|..+........ ....+...|.|.++..+|+|.
T Consensus 562 ~~G~~v~l~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 639 (772)
T 3v2a_R 562 TEQESVSLWCTAD--RSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGD 639 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCceEEEEecc--CCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcE
Confidence 8999999999998 999999999999977654322211 111224569999999999999
Q ss_pred EEEEEEcCCccEE--EEEEEEEEEe-CC--------------CcceEEEeecccCCC
Q psy2166 765 YTCRATNKWGQAE--ISVNLECVVW-SP--------------SQTKLVYSLFEVPQP 804 (805)
Q Consensus 765 Y~C~a~N~~G~~~--~~~~l~V~~~-~~--------------~~~~~~~~~~~~~~~ 804 (805)
|+|.|.|..|... ..+.|.|.+. +| ....|.|.+.+.|.|
T Consensus 640 Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p 696 (772)
T 3v2a_R 640 YVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPP 696 (772)
T ss_dssp ---------------------------------------------------------
T ss_pred EEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCC
Confidence 9999999776544 3455666432 22 134467777777765
No 13
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.1e-45 Score=406.85 Aligned_cols=402 Identities=14% Similarity=0.106 Sum_probs=280.0
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEE-----EEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTV-----EFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 288 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i-----~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~ 288 (805)
.+.+|+.++|.|.+ .+ |.+.+ .|+|++..+... + ...|.|.+++. |+| |+|.+.+..+..+
T Consensus 10 ~v~~G~~v~L~C~~--~g-p~p~~~~~~~~w~k~~~~~~~~-~--------~~~l~i~~v~~-d~g-Y~C~a~~~~~~~~ 75 (450)
T 1z7z_I 10 ILPRGGSVLVTCST--SC-DQPMLLGIETPLPKKELLLPGN-N--------RKVYELSNVQE-DSQ-PMCYSNCPDGQST 75 (450)
T ss_dssp EEETTEEEEEEEEC--CS-SCCCEEEECSSSCEEECCSSTT-T--------EEEEEEEEECS-CBC-CEEEEEETTEEEE
T ss_pred EEecCCcEEEEEEc--cC-CCcccccccceeeecceEecCC-C--------ceEEEEEeccc-CCe-eEEEEeCCCCcce
Confidence 47899999999998 56 77888 999988755432 2 23688999987 999 9999988777778
Q ss_pred EEEEEEEeccCCCCCCeEE-ecCCCcccccCCCeEEEEEEEeecCCCCc---EEEEEECCEEccCCCceEEEEeCcEEEE
Q psy2166 289 ISVNLECVDKSKGQPPKFT-SHIKSLEGLKDGDSAHFECTLTPVNDPEL---KVEWFHNGKPIFHKNRVKMVSDFGFVVM 364 (805)
Q Consensus 289 ~~~~l~v~~~~~~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~p~~---~v~W~~~g~~l~~~~~~~~~~~~~~~~l 364 (805)
..+.|.|.. +|.+. ..+.+.. +.+|+.+.|.|.+. +.|.+ .|+|+|+|..+....... ......|
T Consensus 76 ~~~~l~V~~-----~P~~~~~~~~~~~-v~~G~~v~L~C~~~--g~~~~~~~~v~W~k~g~~l~~~~~~~---~~~~~~L 144 (450)
T 1z7z_I 76 AKTFLTVYW-----TPERVELAPLPSW-QPVGKNLTLRCQVE--GGAPRANLTVVLLRGEKELKREPAVG---EPAEVTT 144 (450)
T ss_dssp EECEEEEEB-----CCSEEEECCCCSE-ECTTSEEEEEEEEE--CCBCGGGEEEEEEETTEEEEEEECCT---TTEEEEE
T ss_pred eEEEEEEEe-----CCCcceecCCCce-EeeCCeEEEEEEec--CCCCCcCcEEEEeeCCEEeecccccc---cccceEE
Confidence 888888874 44444 4444443 88999999999998 77777 999999999886432111 2234479
Q ss_pred EEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeec
Q psy2166 365 DIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQIS 444 (805)
Q Consensus 365 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (805)
.|.++..+|+|.|+|.|.|..|.......+.+.......+
T Consensus 145 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v---------------------------------------- 184 (450)
T 1z7z_I 145 TVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQT---------------------------------------- 184 (450)
T ss_dssp EEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEE----------------------------------------
T ss_pred EEEeeccccCceEEEEEEcccCCCCceEEeeccCccceee----------------------------------------
Confidence 9999999999999999999876433222111110000000
Q ss_pred ceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCC
Q psy2166 445 DVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVT 524 (805)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g 524 (805)
......+|.+..+ ..+.+|+.++|.|.+. |
T Consensus 185 --------------------------------------------~~~~~~~p~~~~~----~~v~~G~~v~l~C~~~--g 214 (450)
T 1z7z_I 185 --------------------------------------------FVLPATPPQLVSP----RVLEVDTQGTVVCSLD--G 214 (450)
T ss_dssp --------------------------------------------CCCCSSCCEEECC----SEEETTSEEEEEEEEE--S
T ss_pred --------------------------------------------eccCCCCCEecCc----eeEEeCCcEEEEEEee--C
Confidence 0000234544332 3488999999999999 5
Q ss_pred C-C--CcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCE--EEEEEEEcCCcceEEEEEEEEee--eeeee--
Q psy2166 525 D-P--DLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSG--VYECRATNKYGSDVTKASLKCVS--KTNLI-- 595 (805)
Q Consensus 525 ~-p--~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G--~Y~C~a~n~~g~~~~~~~l~V~~--~~~~~-- 595 (805)
. | .+.++|+++|..+.. ++....+.....+.+ +++.+|+| .|+|.|.|..|.....+.|.|.. ++.+.
T Consensus 215 ~~P~~~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~ 291 (450)
T 1z7z_I 215 LFPVSEAQVHLALGDQRLNP--TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILT 291 (450)
T ss_dssp CTTGGGCEEEEEETTEECCC--EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEES
T ss_pred CCCCCceEEEEeCCCEeCCc--eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecC
Confidence 5 6 789999999999866 232222211112233 67899999 99999999999999899998886 33221
Q ss_pred -----------ec---CCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCc----ceEEEE
Q psy2166 596 -----------LE---SQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG----SDVTKA 657 (805)
Q Consensus 596 -----------~~---~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~ 657 (805)
+. .|.|.++| +|.++... +....|.|..+..+|+|.|+|.|.|..+ .....+
T Consensus 292 ~~~v~~G~~v~l~C~~~p~p~i~W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~ 361 (450)
T 1z7z_I 292 KPEVSEGTEVTVKCEAHPRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTR 361 (450)
T ss_dssp CSEEETTCEEEEEEEC--------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEE
T ss_pred CeeEeCCCcEEEEEecCCCCEeEE--CCEEcCCC--------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeE
Confidence 11 16679999 88777221 1122499999999999999999997665 334677
Q ss_pred EEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecC--CcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEc
Q psy2166 658 SLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEF--QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI 735 (805)
Q Consensus 658 ~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~--~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l 735 (805)
.|.|..+| .|...+ .+. .+.+|+.+.|.|.+. |+|.|.|+|+|+|..+
T Consensus 362 ~l~V~~~P---------------------------~~~~~~~p~~~-~~~~g~~~~l~C~~~--g~P~p~i~W~~~g~~~ 411 (450)
T 1z7z_I 362 ELRVLYGP---------------------------RLDERDCPGNW-TWPENSQQTPMCQAW--GNPLPELKCLKDGTFP 411 (450)
T ss_dssp ECEEEEEE---------------------------ECCSTTSCSEE-EEETTCEECCCCCCE--EESCCEEEEEETTTEE
T ss_pred EEEEecCC---------------------------ceeeccCCCce-eEcCCCeEEEEEecc--cCCCCcEEEEECCccc
Confidence 88887544 333322 455 789999999999998 9999999999999854
Q ss_pred cCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 736 EASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 736 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
.+... .| +++.+|+|.|+|.|.|.+|..+.++.|.|+.
T Consensus 412 ~~~g~----------~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 412 LPIGE----------SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp CCTTS----------CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCCC----------eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 43322 12 5888999999999999999999999999964
No 14
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=4.5e-43 Score=386.09 Aligned_cols=395 Identities=16% Similarity=0.156 Sum_probs=276.3
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceE-----EEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCe
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKI-----EWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAG 148 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v-----~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 148 (805)
....+.+|+.++|.|.+. + |.+.+ .|+|++..+.. .+ ...|.|.+++. |+| |+|.|.+..+
T Consensus 7 ~~~~v~~G~~v~L~C~~~--g-p~p~~~~~~~~w~k~~~~~~~-~~--------~~~l~i~~v~~-d~g-Y~C~a~~~~~ 72 (450)
T 1z7z_I 7 SKVILPRGGSVLVTCSTS--C-DQPMLLGIETPLPKKELLLPG-NN--------RKVYELSNVQE-DSQ-PMCYSNCPDG 72 (450)
T ss_dssp SEEEEETTEEEEEEEECC--S-SCCCEEEECSSSCEEECCSST-TT--------EEEEEEEEECS-CBC-CEEEEEETTE
T ss_pred CceEEecCCcEEEEEEcc--C-CCcccccccceeeecceEecC-CC--------ceEEEEEeccc-CCe-eEEEEeCCCC
Confidence 367899999999999998 5 77888 99999875542 22 23799999987 999 9999988777
Q ss_pred eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEe
Q psy2166 149 ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLI 228 (805)
Q Consensus 149 ~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~ 228 (805)
.....+.|.|..++.. +...+.+. .+.+|+.+.|.|.+
T Consensus 73 ~~~~~~~l~V~~~P~~----------------------------------------~~~~~~~~-~v~~G~~v~L~C~~- 110 (450)
T 1z7z_I 73 QSTAKTFLTVYWTPER----------------------------------------VELAPLPS-WQPVGKNLTLRCQV- 110 (450)
T ss_dssp EEEEECEEEEEBCCSE----------------------------------------EEECCCCS-EECTTSEEEEEEEE-
T ss_pred cceeEEEEEEEeCCCc----------------------------------------ceecCCCc-eEeeCCeEEEEEEe-
Confidence 7777788888653321 11222222 47899999999998
Q ss_pred eCCCCCe---EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE--------EEEEEEEec
Q psy2166 229 PVGDQTM---TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE--------ISVNLECVD 297 (805)
Q Consensus 229 ~~~~p~~---~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~--------~~~~l~v~~ 297 (805)
.+.|.+ .|.|+|+|..+...... .......|.|.++..+|+|.|+|.|.|..|... ....+.|..
T Consensus 111 -~g~~~~~~~~v~W~k~g~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~ 186 (450)
T 1z7z_I 111 -EGGAPRANLTVVLLRGEKELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFV 186 (450)
T ss_dssp -ECCBCGGGEEEEEEETTEEEEEEECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECC
T ss_pred -cCCCCCcCcEEEEeeCCEEeeccccc---ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeec
Confidence 566666 99999999988643211 122245899999999999999999999865321 223444432
Q ss_pred cCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCC-C--CcEEEEEECCEEccCCCceEEEEeCcEEEEE-EcccCcCC
Q psy2166 298 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVND-P--ELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-IAYVQSHD 373 (805)
Q Consensus 298 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-p--~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~-i~~v~~~d 373 (805)
.+ ..+|.+... ..+.+|+.++|.|.+. +. | .+.+.|+++|..+.. ++.. ......+. ..++..+|
T Consensus 187 ~~-~~~p~~~~~----~~v~~G~~v~l~C~~~--g~~P~~~~~~~W~~~~~~~~~--~~~~--~~~~~~~~~~~~v~~~d 255 (450)
T 1z7z_I 187 LP-ATPPQLVSP----RVLEVDTQGTVVCSLD--GLFPVSEAQVHLALGDQRLNP--TVTY--GNDSFSAKASVSVTAED 255 (450)
T ss_dssp CC-SSCCEEECC----SEEETTSEEEEEEEEE--SCTTGGGCEEEEEETTEECCC--EEEE--ETTEEEEEEEEECCGGG
T ss_pred cC-CCCCEecCc----eeEEeCCcEEEEEEee--CCCCCCceEEEEeCCCEeCCc--eEEe--cCCceeEEEEEEeEhhh
Confidence 21 133444321 2388999999999998 55 6 789999999999865 2222 22222221 22678999
Q ss_pred ce--EEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecC
Q psy2166 374 SG--EYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKE 451 (805)
Q Consensus 374 ~G--~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (805)
+| .|+|.|.|..|.....+.|.|...
T Consensus 256 ~G~~~Y~C~a~n~~g~~~~~~~l~V~~~---------------------------------------------------- 283 (450)
T 1z7z_I 256 EGTQRLTCAVILGNQSQETLQTVTIYSF---------------------------------------------------- 283 (450)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEEEEECC----------------------------------------------------
T ss_pred CCcEEEEEEEccCCccEEEEEEEEEecC----------------------------------------------------
Confidence 99 999999999999888888887632
Q ss_pred CceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEE
Q psy2166 452 GQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVE 531 (805)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~ 531 (805)
.+|.+... .. .+.+|+.++|.|.+. |.|.++
T Consensus 284 ------------------------------------------~~p~i~~~--~~-~v~~G~~v~l~C~~~----p~p~i~ 314 (450)
T 1z7z_I 284 ------------------------------------------PAPNVILT--KP-EVSEGTEVTVKCEAH----PRAKVT 314 (450)
T ss_dssp ------------------------------------------CCCEEEES--CS-EEETTCEEEEEEEC-----------
T ss_pred ------------------------------------------CCCeEecC--Ce-eEeCCCcEEEEEecC----CCCEeE
Confidence 12444432 22 488999999999986 777999
Q ss_pred EEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCc----ceEEEEEEEEeeeeeeee-----------
Q psy2166 532 WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG----SDVTKASLKCVSKTNLIL----------- 596 (805)
Q Consensus 532 W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~----------- 596 (805)
| +|.++... +....|.|..+..+|+|.|+|.|.|..| .....+.|.|..+|.+..
T Consensus 315 W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~ 384 (450)
T 1z7z_I 315 L--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPE 384 (450)
T ss_dssp -------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEET
T ss_pred E--CCEEcCCC--------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcC
Confidence 9 88877221 1223599999999999999999997665 334678888887765422
Q ss_pred -----------cCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEee
Q psy2166 597 -----------ESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 663 (805)
Q Consensus 597 -----------~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 663 (805)
+.|.|.+.|+|+|..+..++.. + .++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 385 g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~----------~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 385 NSQQTPMCQAWGNPLPELKCLKDGTFPLPIGES----------V---TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp TCEECCCCCCEEESCCEEEEEETTTEECCTTSC----------E---ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCeEEEEEecccCCCCcEEEEECCcccCCCCCe----------E---eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 1367799999999744332211 2 5788999999999999999999999999974
No 15
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2.3e-43 Score=378.99 Aligned_cols=369 Identities=22% Similarity=0.393 Sum_probs=266.6
Q ss_pred CCCeEEecCCCCcee---cCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEccc-ccCCCeEE
Q psy2166 64 AKPVFIVPLKPEFKL---GEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEV-YDRDQGIY 139 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v---~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~-~~~D~G~Y 139 (805)
.+|.|+..+. .+.+ .+|+.++|.|.+. |.|.|.|+|+|||..+..+..+.+...++ +|.|.++ +.+|+|.|
T Consensus 4 ~~P~f~~~P~-~~~~~~~~eg~~v~L~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y 78 (384)
T 3kld_A 4 SGPVFVQEPS-HVMFPLDSEEKKVKLSCEVK--GNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTY 78 (384)
T ss_dssp EEEEEEECCC-CEEEETTCSCSEEEECCEEE--EESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEE
T ss_pred CCCEEEeCCc-ceEeecCCCCCeEEEEeEec--CCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEE
Confidence 3578877765 4444 5899999999998 68999999999999997654333333333 5667665 88999999
Q ss_pred EEEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC
Q psy2166 140 TCRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 218 (805)
Q Consensus 140 ~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 218 (805)
+|.|.|..|.... ...+.|...+. +.........+.+|
T Consensus 79 ~C~A~N~~G~~~s~~~~l~v~~~~~-----------------------------------------~~~~~~~~~~v~~G 117 (384)
T 3kld_A 79 QCIATNSFGTIVSREAKLQFAYLEN-----------------------------------------FKTRTRSTVSVRRG 117 (384)
T ss_dssp EEEEEETTEEEECCCEEEEEEEECC-----------------------------------------CSCCCCCCEEEEET
T ss_pred EEEEEcCcccEEecceEEEEecccc-----------------------------------------cccCCCCceeEEcC
Confidence 9999999987543 44555533221 11111122247789
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEE---EEEEE
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS---VNLEC 295 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~---~~l~v 295 (805)
+.+.|.|... .+.|.+.+.|++++..+....+...... ...|.|.+++.+|+|.|+|.|.|..+..... ..+.+
T Consensus 118 ~~~~l~C~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v 194 (384)
T 3kld_A 118 QGMVLLCGPP-PHSGELSYAWIFNEYPSYQDNRRFVSQE--TGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLIL 194 (384)
T ss_dssp CCEEECCCCC-SEESCEEEEEEETTEECCCSSSEEECTT--TCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEE
T ss_pred CCeEEecCCC-CCCCCeEEEEEECCCCCEeeccEEEEcC--CCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEE
Confidence 9999999642 2456789999999998765544333222 2369999999999999999999987654321 11221
Q ss_pred ec--cCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEEC-CEEccCCCceEEEEeCcEEEEEEcccCcC
Q psy2166 296 VD--KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHN-GKPIFHKNRVKMVSDFGFVVMDIAYVQSH 372 (805)
Q Consensus 296 ~~--~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~l~i~~v~~~ 372 (805)
.. .....+|.+.........+.+|+.+.|.|.+. +.|.|.+.|+++ +..+....+ ... ....|.|.++..+
T Consensus 195 ~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~--~~~--~~~~L~I~~v~~~ 268 (384)
T 3kld_A 195 RNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFAL--GNPVPTILWRRADGKPIARKAR--RHK--SNGILEIPNFQQE 268 (384)
T ss_dssp EEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEE--EESCCEEEEEETTCCCCCTTCE--ECT--TSCEEEECSCCGG
T ss_pred ccCCcccccCCceeecCCCceEecCCCcEEEEEEEe--ecCCCcEEEEeCCCccccccce--ecC--CCcEEEECCCChh
Confidence 10 00112334443333333478999999999998 889999999995 555543221 111 2236999999999
Q ss_pred CceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 373 DSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 373 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
|+|.|+|.|.|..|.....+.|.|..
T Consensus 269 D~G~Y~C~a~N~~G~~~~~~~l~v~~------------------------------------------------------ 294 (384)
T 3kld_A 269 DAGSYECVAENSRGKNVAKGQLTFYA------------------------------------------------------ 294 (384)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEE------------------------------------------------------
T ss_pred hCEEEEEEEEcCCCeEEEEEEEEEec------------------------------------------------------
Confidence 99999999999999998888888753
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEW 532 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W 532 (805)
+|.+...+.+.. +.+|+.+.|.|.+. |.|.|.|+|
T Consensus 295 ------------------------------------------~P~~~~~~~~~~-v~~g~~v~l~C~~~--g~P~p~i~W 329 (384)
T 3kld_A 295 ------------------------------------------QPNWVQIINDIH-VAMEESVFWECKAN--GRPKPTYRW 329 (384)
T ss_dssp ------------------------------------------EEEEEECCCCEE-ECTTCCEEEECEEE--EESCCEEEE
T ss_pred ------------------------------------------CCccccCCCceE-ecCCCCEEEEeECC--ccCCCeEEE
Confidence 344544444443 88999999999999 678899999
Q ss_pred EECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 533 FYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 533 ~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
+|||.+|..+.++.+. ++ .|.|.++..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 330 ~k~g~~l~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 330 LKNGDPLLTRDRIQIE--QG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EETTEECCCBTTEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EECCEECCCCccEEEe--CC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 9999999887777643 23 599999999999999999999999999999999864
No 16
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.5e-43 Score=380.36 Aligned_cols=372 Identities=25% Similarity=0.387 Sum_probs=267.8
Q ss_pred CCCceecccccccc--cCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCC-CCcccEEEE
Q psy2166 201 RPPQFTSEFQHLSN--LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGT-KIEDTGVYT 277 (805)
Q Consensus 201 ~~p~~~~~~~~~~~--v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~ 277 (805)
.+|.|...|.+... ..+|+.+.|.|.+ .|.|.|+|+|+|+|..+......+....++ .|.|.+. +.+|+|.|+
T Consensus 4 ~~P~f~~~P~~~~~~~~~eg~~v~L~C~~--~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y~ 79 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLDSEEKKVKLSCEV--KGNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQ 79 (384)
T ss_dssp EEEEEEECCCCEEEETTCSCSEEEECCEE--EEESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEEE
T ss_pred CCCEEEeCCcceEeecCCCCCeEEEEeEe--cCCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEEE
Confidence 56788887776642 2589999999998 688999999999999997654443344444 4666665 789999999
Q ss_pred EEEEcCCeeEE-EEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE
Q psy2166 278 CRATNKWGQAE-ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 356 (805)
Q Consensus 278 C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~ 356 (805)
|.|.|..|... ....+.+... +.+.........+.+|+.+.|.|.... +.|.+.+.|++++.++....+..+.
T Consensus 80 C~A~N~~G~~~s~~~~l~v~~~-----~~~~~~~~~~~~v~~G~~~~l~C~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~ 153 (384)
T 3kld_A 80 CIATNSFGTIVSREAKLQFAYL-----ENFKTRTRSTVSVRRGQGMVLLCGPPP-HSGELSYAWIFNEYPSYQDNRRFVS 153 (384)
T ss_dssp EEEEETTEEEECCCEEEEEEEE-----CCCSCCCCCCEEEEETCCEEECCCCCS-EESCEEEEEEETTEECCCSSSEEEC
T ss_pred EEEEcCcccEEecceEEEEecc-----cccccCCCCceeEEcCCCeEEecCCCC-CCCCeEEEEEECCCCCEeeccEEEE
Confidence 99999988753 3444544321 122222223334788999999997642 4567899999999988655544333
Q ss_pred EeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEE---EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcc
Q psy2166 357 SDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTR---ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPV 433 (805)
Q Consensus 357 ~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 433 (805)
...+ .|.|.++..+|+|.|+|.|.|..+..... ..+.+...
T Consensus 154 ~~~~--~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~---------------------------------- 197 (384)
T 3kld_A 154 QETG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND---------------------------------- 197 (384)
T ss_dssp TTTC--CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEE----------------------------------
T ss_pred cCCC--cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccC----------------------------------
Confidence 2333 58999999999999999999988654321 12222100
Q ss_pred cCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCe
Q psy2166 434 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQS 513 (805)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 513 (805)
......+|.+....+....+.+|++
T Consensus 198 -------------------------------------------------------~~~~~~~p~~~~~~~~~~~~~~G~~ 222 (384)
T 3kld_A 198 -------------------------------------------------------GVMGEYEPKIEVQFPETVPAEKGTT 222 (384)
T ss_dssp -------------------------------------------------------EECCCEEEEEEEECCSEEEEETTSC
T ss_pred -------------------------------------------------------CcccccCCceeecCCCceEecCCCc
Confidence 0001234555555454455889999
Q ss_pred EEEEEEEeeCCCCCcEEEEEEC-CEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeee
Q psy2166 514 AHFEARLTPVTDPDLVVEWFYN-GKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 514 v~L~C~v~~~g~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 592 (805)
++|.|.+. |.|.|.++|+|+ |..+....+. ..
T Consensus 223 v~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~~--~~------------------------------------------- 255 (384)
T 3kld_A 223 VKLECFAL--GNPVPTILWRRADGKPIARKARR--HK------------------------------------------- 255 (384)
T ss_dssp EEEEEEEE--EESCCEEEEEETTCCCCCTTCEE--CT-------------------------------------------
T ss_pred EEEEEEEe--ecCCCcEEEEeCCCcccccccee--cC-------------------------------------------
Confidence 99999999 678889999995 4333221000 00
Q ss_pred eeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccc
Q psy2166 593 NLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQ 672 (805)
Q Consensus 593 ~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~ 672 (805)
. + ..|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 256 ---------------------~---------~--~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~--------- 294 (384)
T 3kld_A 256 ---------------------S---------N--GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA--------- 294 (384)
T ss_dssp ---------------------T---------S--CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE---------
T ss_pred ---------------------C---------C--cEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEec---------
Confidence 0 0 1277777888888888888888888777777777764
Q ss_pred cccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEE
Q psy2166 673 LPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVL 752 (805)
Q Consensus 673 ~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L 752 (805)
+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|+|+|||.++..+.++.+. .+ .|
T Consensus 295 ------------------~P~~~~~~~~~-~v~~g~~v~l~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~~--~~--~L 349 (384)
T 3kld_A 295 ------------------QPNWVQIINDI-HVAMEESVFWECKAN--GRPKPTYRWLKNGDPLLTRDRIQIE--QG--TL 349 (384)
T ss_dssp ------------------EEEEEECCCCE-EECTTCCEEEECEEE--EESCCEEEEEETTEECCCBTTEEEE--TT--EE
T ss_pred ------------------CCccccCCCce-EecCCCCEEEEeECC--ccCCCeEEEEECCEECCCCccEEEe--CC--EE
Confidence 46666666677 899999999999999 9999999999999999888887643 34 79
Q ss_pred EEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 753 EILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 753 ~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
.|.++..+|+|.|+|.|.|.+|....+++|.|..
T Consensus 350 ~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 350 NITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 9999999999999999999999999999999964
No 17
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=3.4e-44 Score=403.02 Aligned_cols=423 Identities=13% Similarity=0.127 Sum_probs=297.3
Q ss_pred EEEEEEEecCCce-eccccCCC---CchhhhhHHhhhhhhcCccccCCCCC------CCCcCCCeEEecCCCCceecCCC
Q psy2166 13 TSGTLKCLGQKDI-YLETQHPM---GAAGLEKVQEVEHALAGKYQRQPSGP------EETFAKPVFIVPLKPEFKLGEAQ 82 (805)
Q Consensus 13 ~~~~l~~~~~~~~-~~~~~~~~---~~~g~~~i~~~~~~d~g~y~c~~~~~------~~~~~~p~~~~~~~~~~~v~~G~ 82 (805)
.+++|.|.+.+.+ |+.++.+. +..+.|.|.+++.+|+|.|+|.+.+. ..+..+|.+. ..+....+.+|+
T Consensus 52 ~~v~l~C~~~~~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ng~~~~~~l~V~~p~~~~-~~~~~~~v~~G~ 130 (524)
T 2ec8_A 52 DEIRLLCTDPGFVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFVRDPAKLF-LVDRSLYGKEDN 130 (524)
T ss_dssp SCEEEEEECTTEEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETTSCEEEEEEECCCSSCSB-CCCCCCCEETTS
T ss_pred CeEEEEEeCCceEEEcCCCccccccCccceEEEcccchhhCEEEEEeecCCcceEEEEEECCCCccc-ccccceEEEcCC
Confidence 3567888888753 66555543 34567899999999999999987651 1222334333 334467899999
Q ss_pred cEEEEEEEecCCCCCceEEEEE-CCEecCCCCceEEEecCcEEEEEEcccccCCCe-EEEEEEEeCCeeEEE-EEEEEEe
Q psy2166 83 PLHLEAQVEPKNDPNLKIEWIF-NGKPLELGSRFKTTADFGFVTLDLTEVYDRDQG-IYTCRAWNLAGETFT-STTIYCS 159 (805)
Q Consensus 83 ~v~L~C~~~~~~~p~~~v~W~k-~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~n~~g~~~~-~~~l~V~ 159 (805)
.++|.|.+. +.+.+.|+|+| ||..+..+.++.+..++ .|.|.+++.+|+| .|+|.|.|..+...+ ...|.|.
T Consensus 131 ~v~l~C~~~--~~~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 205 (524)
T 2ec8_A 131 DTLVRCPLT--DPEVTNYSLKGCQGKPLPKDLRFIPDPKA---GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVR 205 (524)
T ss_dssp CEEECCCBS--CCCCSCEEEECSSSCCCCSSCEEEEETTT---EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEE
T ss_pred eEEEECcCC--CCccceEEEEccCCcCcCCCCceeECCCc---cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEE
Confidence 999999998 45568999998 89999888888776655 7999999999999 999999988665433 5566664
Q ss_pred ccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeE-EE
Q psy2166 160 TKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMT-VE 238 (805)
Q Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~-i~ 238 (805)
..+ ..+|.|...+... .+.+|+.++|.|.+. +.|.+. +.
T Consensus 206 ~~~-------------------------------------~~~p~i~~~~~~~-~v~~G~~v~L~C~~~--g~p~p~~i~ 245 (524)
T 2ec8_A 206 PAF-------------------------------------KAVPVVSVSKASY-LLREGEEFTVTCTIK--DVSSSVYST 245 (524)
T ss_dssp CCC-------------------------------------CSCCEEECSCSEE-EEETTSCEEEEEEEE--ESSTTCEEE
T ss_pred eCC-------------------------------------CCCCcEEecCCcc-eEEcCCcEEEEEEEe--cCCCcEEEE
Confidence 211 1457777766665 588999999999994 666655 99
Q ss_pred EEECCEEc--cCCCcEEEE---EEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCC--
Q psy2166 239 FLYNGKPI--EASHRIRTV---HAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIK-- 311 (805)
Q Consensus 239 W~k~g~~l--~~~~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~-- 311 (805)
|+++|..+ ......... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|. .+|.+...+.
T Consensus 246 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~-----~~p~~~~~~~~~ 320 (524)
T 2ec8_A 246 WKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV-----DKGFINIFPMIN 320 (524)
T ss_dssp EEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEE-----SSCEEEEEESSC
T ss_pred EEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEe-----ccCceEeecCCC
Confidence 99999873 322222221 12235789999999999999999999999998888888887 4566654433
Q ss_pred CcccccCCCeEEEEEEEeecCCCCcE-EEEEECCEEccCCC-ceEEEEeC----cEEEEEEcccCcCCceEEEEEEEeCc
Q psy2166 312 SLEGLKDGDSAHFECTLTPVNDPELK-VEWFHNGKPIFHKN-RVKMVSDF----GFVVMDIAYVQSHDSGEYVCRAWNKY 385 (805)
Q Consensus 312 ~~~~~~~g~~~~l~C~~~~~~~p~~~-v~W~~~g~~l~~~~-~~~~~~~~----~~~~l~i~~v~~~d~G~Y~C~a~n~~ 385 (805)
....+.+|+.++|.|.+. +.|.+. +.|+++|..+.... ++....++ ....|.|.++..+|+|.|+|.|.|..
T Consensus 321 ~~~~v~~G~~v~l~C~~~--g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 398 (524)
T 2ec8_A 321 TTVFVNDGENVDLIVEYE--AFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSD 398 (524)
T ss_dssp SEEEECTTCCEEEEEEEE--EESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred ceEEEcCCCcEEEEEEEe--ecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecC
Confidence 233488999999999997 778888 99999999987654 33332222 34679999999999999999999999
Q ss_pred eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccC
Q psy2166 386 GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVT 465 (805)
Q Consensus 386 g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (805)
|.....+.|.|..
T Consensus 399 g~~~~~~~l~V~~------------------------------------------------------------------- 411 (524)
T 2ec8_A 399 VNAAIAFNVYVNT------------------------------------------------------------------- 411 (524)
T ss_dssp CEEEEEEEEEECE-------------------------------------------------------------------
T ss_pred ceEEEEEEEEEec-------------------------------------------------------------------
Confidence 9988888888753
Q ss_pred CCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccC----
Q psy2166 466 DPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPH---- 541 (805)
Q Consensus 466 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~---- 541 (805)
+|.+..... ..+| +|.|.+. |.|.|.|+|+++|..+..
T Consensus 412 -----------------------------~P~i~~~~~----~~~g---~l~C~~~--g~P~p~i~W~~~~~~~~~~~~~ 453 (524)
T 2ec8_A 412 -----------------------------KPEILTYDR----LVNG---MLQCVAA--GFPEPTIDWYFCPGTEQRCSAS 453 (524)
T ss_dssp -----------------------------EEEEEEEEC----CSSS---CEEEEEE--EESCCEEECCCC----------
T ss_pred -----------------------------CCeEeeccc----CcCc---EEEEEEE--eecCCEEEEEECCCcccccccc
Confidence 344444332 3456 9999999 678889999999876621
Q ss_pred ----CCc---eEEEeeCCEEE-EEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 542 ----GHR---YRTFHDFGIVI-LDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 542 ----~~~---~~~~~~~~~~~-L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
+.+ +....++.... ..|.....+|+|.|+|.|.|..|.....+.|.|..++.
T Consensus 454 ~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~ 513 (524)
T 2ec8_A 454 VLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNK 513 (524)
T ss_dssp CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-----
T ss_pred cCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCH
Confidence 111 11122233222 22444446999999999999999999999998887654
No 18
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-42 Score=373.24 Aligned_cols=373 Identities=20% Similarity=0.292 Sum_probs=276.9
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC--CceEEEecCcEEEEEEccc-----ccCCC
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG--SRFKTTADFGFVTLDLTEV-----YDRDQ 136 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~--~~~~~~~~~~~~~L~I~~~-----~~~D~ 136 (805)
....|...+ .++.+.+|+.++|.|.+.+ +.|.+.|.|+|||..+... .++....++ +|.|.++ +.+|+
T Consensus 20 ~~~~~~~~P-~~~~v~~G~~v~L~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~~~D~ 94 (403)
T 3laf_A 20 RSLHFVSEP-SDAVTMRGGNVLLNCSAES-DRGVPVIKWKKDGLILALGMDDRKQQLPNG---SLLIQNILHSRHHKPDE 94 (403)
T ss_dssp CSSEEEECC-CCEEECTTCCEEECCEEEC-TTCCCEEEEEETTEECCTTSCTTEEECTTS---CEEECSCCCBTTBCSSC
T ss_pred eeEEEEeCC-CceEEecCCcEEEEEEcCC-CCCCceEEEEECCEECccCCcccEEEecCC---cEEEeeeeccCCCCCcc
Confidence 344555444 4789999999999999984 3678899999999998753 455555554 5777776 78899
Q ss_pred eEEEEEEEeCCeeEE--EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 137 GIYTCRAWNLAGETF--TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 137 G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
|.|+|.|.+..+... ....+.|.. ||.+...+... .
T Consensus 95 G~Y~C~~~~~~~~~~~s~~~~l~v~~-----------------------------------------p~~~~~~~~~~-~ 132 (403)
T 3laf_A 95 GLYQCEASLGDSGSIISRTAKVMVAG-----------------------------------------PLRFLSQTESI-T 132 (403)
T ss_dssp EEEEEEEECGGGCEEECCCEEEEECC-----------------------------------------CCEECSCCCCE-E
T ss_pred eEEEEEEEeCCCccEEEEEEEEEecC-----------------------------------------CCccccCCCcE-E
Confidence 999999997543332 234444432 34444333333 4
Q ss_pred cCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeE-EEEEEE
Q psy2166 215 LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA-EISVNL 293 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l 293 (805)
+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+................|.|.+++.+|+|.|+|.+.|..+.. ...+.+
T Consensus 133 ~~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l 210 (403)
T 3laf_A 133 AFMGDTVLLKCEV--IGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEV 210 (403)
T ss_dssp EETTSCEEECCCE--ECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEE
T ss_pred EEcCCeEEEEEEE--cccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeE
Confidence 7899999999988 5788899999999988853221111112222379999999999999999999987653 345666
Q ss_pred EEeccCCCCCC-eEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcC
Q psy2166 294 ECVDKSKGQPP-KFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSH 372 (805)
Q Consensus 294 ~v~~~~~~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~ 372 (805)
.|...+....+ .+...+... .+.+|+.++|.|.+. +.|.+.+.|++++..+...........+. .|.|.++..+
T Consensus 211 ~v~~~p~~~~~~~~~~~~~~~-~~~~g~~~~l~C~~~--~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~ 285 (403)
T 3laf_A 211 RILSDPGLHRQLYFLQRPSNV-IAIEGKDAVLECCVS--GYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDD 285 (403)
T ss_dssp EEECCCCCCEEEEEEECCCCE-EEETTSCEEECCEEE--EESCCEEEEEETTEECCCSSSSEEEETTT--EEEECSCCGG
T ss_pred EEecCCCcccCceEecCCCce-EecCCCcEEEEEEcC--CCCCCeEEEEECCeeccCCCceEEECCcc--EEEEeCCCHH
Confidence 66543321111 233333333 377999999999998 77888999999999987554433333333 6899999999
Q ss_pred CceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 373 DSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 373 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
|+|.|+|.|.|..|.....+.|.|..
T Consensus 286 d~G~Y~C~a~n~~g~~~~~~~l~V~~------------------------------------------------------ 311 (403)
T 3laf_A 286 DSGTYTCVVTYKNENISASAELTVLV------------------------------------------------------ 311 (403)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEE------------------------------------------------------
T ss_pred HCEEEEEEEEcCCCceEEEEEEEEEC------------------------------------------------------
Confidence 99999999999999988888888753
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEW 532 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W 532 (805)
+|.+...+.... +.+|+.++|.|.+. |.|.+.|+|
T Consensus 312 ------------------------------------------~p~~~~~~~~~~-~~~g~~v~l~C~~~--g~p~p~v~W 346 (403)
T 3laf_A 312 ------------------------------------------PPWFLNHPSNLY-AYESMDIEFECAVS--GKPVPTVNW 346 (403)
T ss_dssp ------------------------------------------EEEEEECCCCEE-CCTTCCEEECCEEE--EESCCEEEE
T ss_pred ------------------------------------------CCcEeecCcceE-EecCCeEEEEEEEe--eccCCEEEE
Confidence 344544444443 88999999999999 678889999
Q ss_pred EECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeee
Q psy2166 533 FYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 533 ~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 592 (805)
+|+|..+..+.++.+..+. .|.|.++..+|+|.|+|.|.|..|.....+.|.|..++
T Consensus 347 ~~~g~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 347 MKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKPA 403 (403)
T ss_dssp EETTEECCCSSSEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC-
T ss_pred EECCEECCCCCcEEEecCc---cEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCCC
Confidence 9999999877776654332 59999999999999999999999999999999987653
No 19
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=3.1e-41 Score=384.68 Aligned_cols=399 Identities=14% Similarity=0.160 Sum_probs=289.3
Q ss_pred hhhHHhhhhhhcCccccCCCCCC---------CCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEe
Q psy2166 38 LEKVQEVEHALAGKYQRQPSGPE---------ETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKP 108 (805)
Q Consensus 38 ~~~i~~~~~~d~g~y~c~~~~~~---------~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~ 108 (805)
.|.|.+++.+|+|.|+|.+.+.. .+..+|.|... +..+.+.+|+.++|.|.+.+ +.+.+.|.|+|++..
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~-~~~~~v~~G~~v~l~C~~~~-~~~~~~v~W~k~~~~ 153 (585)
T 2ocw_A 76 VVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND-TKVYTVDLGRTVTINCPFKT-ENAQKRKSLYKQIGL 153 (585)
T ss_pred EEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCC-CccEEEEcCCCEEEEEEecC-CCCCccEEEEECCCC
Confidence 47899999999999999865432 23456666544 34678999999999999984 245678999999864
Q ss_pred cC-------------CCCceEEEecC---cEEEEEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCC
Q psy2166 109 LE-------------LGSRFKTTADF---GFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPK 172 (805)
Q Consensus 109 i~-------------~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~ 172 (805)
+. ...|+.+..++ +.++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~---------- 223 (585)
T 2ocw_A 154 YPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE---------- 223 (585)
T ss_pred CceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC----------
Confidence 32 13466665543 35589999999999999999999998888888888875421
Q ss_pred CcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEE-ECCEE----c
Q psy2166 173 GEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFL-YNGKP----I 246 (805)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~-k~g~~----l 246 (805)
|.+ ..+.+|+.+.|.|.+. ...|. +.+.|+ ++|.. +
T Consensus 224 ------------------------------p~~-------~~~~~G~~v~l~C~~~-~~~~~~~~~~w~~~~g~~~~~~~ 265 (585)
T 2ocw_A 224 ------------------------------PEL-------VYEDLRGSVTFHCALG-PEVANVAKFLCRQSSGENCDVVV 265 (585)
T ss_pred ------------------------------Cce-------eEEcCCCcEEEEEEcC-CCCCCceEEEEEeCCCCCcceEE
Confidence 211 1367999999999962 22233 789997 88832 1
Q ss_pred c--------CCCcEEEEEE--cCeEEEEEcCCCCcccEEEEEEEEcCCeeE----EEEEEEEEeccCCCCCCeEEecCCC
Q psy2166 247 E--------ASHRIRTVHA--FGMVVLEILGTKIEDTGVYTCRATNKWGQA----EISVNLECVDKSKGQPPKFTSHIKS 312 (805)
Q Consensus 247 ~--------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~----~~~~~l~v~~~~~~~~p~~~~~~~~ 312 (805)
. ...++.+... ++...|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|. .+|.+...+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~-----~~p~~~~~~~~ 340 (585)
T 2ocw_A 266 NTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVN-----EESTIPRSPTV 340 (585)
T ss_pred eCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEe-----cccccccCCcc
Confidence 1 1233333222 344589999999999999999999953333 167777776 34555544444
Q ss_pred cccccCCCeEEEEEEEeecCCCCcEE----EEEE--CCE--EccC---------CCceEEEE--eCcEEEEEEcccCcCC
Q psy2166 313 LEGLKDGDSAHFECTLTPVNDPELKV----EWFH--NGK--PIFH---------KNRVKMVS--DFGFVVMDIAYVQSHD 373 (805)
Q Consensus 313 ~~~~~~g~~~~l~C~~~~~~~p~~~v----~W~~--~g~--~l~~---------~~~~~~~~--~~~~~~l~i~~v~~~d 373 (805)
.. +.+|+.+.|.|.+. +.|.+.+ .|++ +|. .+.. ..++.+.. .++.++|.|.++..+|
T Consensus 341 ~~-~~~G~~v~l~C~~~--~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D 417 (585)
T 2ocw_A 341 VK-GVAGSSVAVLCPYN--RKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRD 417 (585)
T ss_pred eE-EEeCCcEEEEEecC--CCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhh
Confidence 33 78999999999997 7888776 7999 887 4432 33454443 2455669999999999
Q ss_pred ceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCc
Q psy2166 374 SGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 453 (805)
Q Consensus 374 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (805)
+|.|+|.| |..|.....+.|.|...
T Consensus 418 ~G~Y~C~a-n~~g~~~~~~~l~V~~~------------------------------------------------------ 442 (585)
T 2ocw_A 418 AGFYWCLT-NGDTLWRTTVEIKIIEG------------------------------------------------------ 442 (585)
T ss_pred CEEEEEcc-cCCCccceeEEEEEecC------------------------------------------------------
Confidence 99999999 88888888888887532
Q ss_pred eEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeC--CCCCcEEE
Q psy2166 454 SAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPV--TDPDLVVE 531 (805)
Q Consensus 454 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~--g~p~~~v~ 531 (805)
+|.+.. +.. ..+.+|+.++|.|.+.+. +.|.+.|+
T Consensus 443 -----------------------------------------~p~~~~-~~~-~~v~~G~~v~L~C~~~~~~~~~p~~~v~ 479 (585)
T 2ocw_A 443 -----------------------------------------EPNLKV-PGN-VTAVLGETLKVPCHFPCKFSSYEKYWCK 479 (585)
T ss_pred -----------------------------------------cccccc-CCc-eeEecCCcEEEEEEecCCCCCCccEEEE
Confidence 222222 222 348899999999999632 56888999
Q ss_pred EEECCEEccCCCc------eEE-EeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEE-EEEEEeeee
Q psy2166 532 WFYNGKKLPHGHR------YRT-FHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK-ASLKCVSKT 592 (805)
Q Consensus 532 W~~~g~~l~~~~~------~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~ 592 (805)
|+|||..+..... +.. ..++....|.|.+++.+|+|.|+|.|.|..|..... +.|.|..++
T Consensus 480 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 480 WNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 9999988753321 222 223445789999999999999999999999976644 889998876
No 20
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=368.15 Aligned_cols=359 Identities=14% Similarity=0.172 Sum_probs=235.4
Q ss_pred eecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
+...+.. .++.+|+.+.|.|.+ .+.|.+.|.|++++..+.....+. ........|.|.+++.+|+|.|+|.|.|..
T Consensus 51 ~~~~~~~-v~V~~G~~v~L~C~v--~g~P~p~i~W~~~~~~l~~~~~~~-~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 126 (423)
T 3qs7_E 51 TVYEAAA-VEVDVSASITLQVLV--DAPGNISCLWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLLFIQSEA 126 (423)
T ss_dssp -----CE-EEECSSCCEEEEEEC--SCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--
T ss_pred ceecccc-EEEecCCcEEEEEEE--EcCCCCeEEEEECCCccCccceec-cccceEEEEEEeecCcccCEEEEEEEEcCC
Confidence 3333333 368999999999998 789999999999998876533221 111223579999999999999999999999
Q ss_pred eeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCc---eEEEEeCcE
Q psy2166 285 GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNR---VKMVSDFGF 361 (805)
Q Consensus 285 g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~---~~~~~~~~~ 361 (805)
|.....+.|.|.. +|.+.. .....+..|+.+.|.|.+. |.|.|.|+|++++..+..... ..+.....
T Consensus 127 g~~~~~~~l~V~~-----~p~~~~--~~p~~~~~~~~~~L~C~a~--G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~- 196 (423)
T 3qs7_E 127 TNYTILFTVSIRN-----TLLYTL--RRPYFRKMENQDALVCISE--SVPEPIVEWVLCDSQGESCKEESPAVVKKEEK- 196 (423)
T ss_dssp CEEEEEEEEEEC----------CE--EEEEEEECSSSSCEEEEEE--ESSCCEEEEEEC-------------CEEECCS-
T ss_pred CcEEEEEEEEEec-----Cccccc--cCCcEeccCCceEEEEEEe--eecCCeEEEEECCCCCccccccccccccccce-
Confidence 9888888888762 333211 1111245688889999998 899999999999876532110 00111111
Q ss_pred EEEEEcccCcCCceEEEEEEEeCceeeEEE-EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCcee
Q psy2166 362 VVMDIAYVQSHDSGEYVCRAWNKYGEDFTR-ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFI 440 (805)
Q Consensus 362 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (805)
. +...|+|.|+|.|.|..|..... +.|.|.
T Consensus 197 -~-----l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~------------------------------------------- 227 (423)
T 3qs7_E 197 -V-----LHELFGTDIRCCARNELGRECTRLFTIDLN------------------------------------------- 227 (423)
T ss_dssp -E-----ECCCCSSCEEEEEECSSCEEEEECEEEESS-------------------------------------------
T ss_pred -E-----EecccCeEEEEEEEcCCCCcceeeEEEEEe-------------------------------------------
Confidence 1 15789999999999999876542 444432
Q ss_pred eeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEE
Q psy2166 441 TQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL 520 (805)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v 520 (805)
.+|.+ .+. ...+.+|+.++|.|.+
T Consensus 228 -----------------------------------------------------~~p~~--~~~-~~~v~~G~~v~L~C~~ 251 (423)
T 3qs7_E 228 -----------------------------------------------------QTPQT--TLP-QLFLKVGEPLWIRCKA 251 (423)
T ss_dssp -----------------------------------------------------SCCCS--STT-EEEEETTSCEEEEEEE
T ss_pred -----------------------------------------------------cCCcc--CCC-ceEEeCCCeEEEEEEE
Confidence 22222 111 2348899999999999
Q ss_pred eeCCCCCcEEEEEECCEEccCCCceEE--Ee----eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeee
Q psy2166 521 TPVTDPDLVVEWFYNGKKLPHGHRYRT--FH----DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL 594 (805)
Q Consensus 521 ~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 594 (805)
.+ ..|.|.|+|+|+|..+.....+.. .. ......|.|.+++.+|+|.|+|.|.|. ....+.|.|..++.+
T Consensus 252 ~g-~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i 327 (423)
T 3qs7_E 252 VH-VNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFI 327 (423)
T ss_dssp EE-SSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEE
T ss_pred Ec-CCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcc
Confidence 94 377789999999998865432211 11 112346999999999999999999887 556666666544331
Q ss_pred eecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccc
Q psy2166 595 ILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLP 674 (805)
Q Consensus 595 ~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p 674 (805)
. +..
T Consensus 328 ~-----------------------------------~~~----------------------------------------- 331 (423)
T 3qs7_E 328 N-----------------------------------ATN----------------------------------------- 331 (423)
T ss_dssp E-----------------------------------EC------------------------------------------
T ss_pred e-----------------------------------EcC-----------------------------------------
Confidence 0 000
Q ss_pred cccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEE
Q psy2166 675 ELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEI 754 (805)
Q Consensus 675 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i 754 (805)
...+. .+.+|+.+.|.|.+. |+|.|.|+|+|||+.|..+.+.. . .+ ..+.+
T Consensus 332 ----------------------~~~~~-~v~~G~~v~l~C~~~--g~P~p~i~W~k~g~~l~~~~~~~--~-~~-~~~~~ 382 (423)
T 3qs7_E 332 ----------------------SSEDY-EIDQYEEFCFSVRFK--AYPQIRCTWTFSRKSFPCEQKGL--D-NG-YSISK 382 (423)
T ss_dssp ------------------------CEE-CCCTTCCCCEEEEEE--EESCCEEEEEETTEEEECBCCBC--S-SS-SEEEE
T ss_pred ----------------------CCccE-EecCCCeEEEEEEEE--EcCCCeEEEEECCEECCCccccc--c-CC-cEEEE
Confidence 00112 678899999999999 99999999999999997653210 0 01 12223
Q ss_pred cCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEeCCCc
Q psy2166 755 LGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 755 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
..+..+|+|.|+|.|.|.+|..+.++.|.|...|.++
T Consensus 383 ~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 383 FCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHH 419 (423)
T ss_dssp ECCCTTCCSCEEEEEEETTEEEEEEEEEC--------
T ss_pred EecccccCEEEEEEEEcCCceEEEEEEEEEecCCccc
Confidence 5567789999999999999999999999998876553
No 21
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=9.7e-42 Score=366.93 Aligned_cols=365 Identities=22% Similarity=0.320 Sum_probs=270.9
Q ss_pred CCCeEEecCCCCcee---cCCCcEEEEEEEecCCCCCceEEEEECCEecCCC--CceEEEecCcEEEEEEccccc-CCCe
Q psy2166 64 AKPVFIVPLKPEFKL---GEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG--SRFKTTADFGFVTLDLTEVYD-RDQG 137 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v---~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~--~~~~~~~~~~~~~L~I~~~~~-~D~G 137 (805)
.+|.|...+. +..+ .+|+.++|.|.+. |.|.+.|.|+|||..+..+ .++.+. ++ +|.|.++.. +|+|
T Consensus 3 ~~P~~~~~p~-~~~~~~~~~g~~v~l~C~~~--g~p~~~v~W~k~g~~~~~~~~~~~~~~--~~--~L~i~~~~~~~D~G 75 (382)
T 1cs6_A 3 YGPVFEEQPA-HTLFPEGSAEEKVTLTCRAR--ANPPATYRWKMNGTELKMGPDSRYRLV--AG--DLVISNPVKAKDAG 75 (382)
T ss_dssp EEEEEEECCC-CEEEETTCSCCEEEECCEEE--EESCCEEEEEETTEECCCSTTSSEEEE--TT--EEEEESCCHHHHCE
T ss_pred CCCEEEECCC-cEEEecCCCCCcEEEEEEec--CCCCCEEEEEECCEECCcCCCccEEee--CC--eEEEecccccccCE
Confidence 3678877776 3444 7899999999998 5788899999999998754 455543 33 799999987 9999
Q ss_pred EEEEEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 138 IYTCRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
.|+|.|.|..|.... ...|.|...+.+ .........+.
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~~~~~~-----------------------------------------~~~~~~~~~v~ 114 (382)
T 1cs6_A 76 SYQCVATNARGTVVSREASLRFGFLQEF-----------------------------------------SAEERDPVKIT 114 (382)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEEECCC-----------------------------------------CSSCCCCEEEE
T ss_pred EEEEEEEcCCcEEEecceEEEeeccccc-----------------------------------------cccCCCceEEe
Confidence 999999999887643 456666543211 11111122477
Q ss_pred CCceEEEEEEEeeCCCCCeEEEEEECCEEccC--CCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEE-----
Q psy2166 217 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA--SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI----- 289 (805)
Q Consensus 217 ~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~----- 289 (805)
+|+.+.|.|.+. .+.|.+.+.|++++..+.. ..+.. .......|.|.+++.+|+|.|+|.+.|..+....
T Consensus 115 ~G~~v~l~C~~~-~~~p~~~i~W~~~~~~~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~ 191 (382)
T 1cs6_A 115 EGWGVMFTCSPP-PHYPALSYRWLLNEFPNFIPADGRRF--VSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSK 191 (382)
T ss_dssp TTSCEEECCCCC-SEESCCEEEEEESSTTCBCCCCSSEE--ECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECC
T ss_pred cCCcEEEEeCCC-CCCCCcEEEEEECCCccccccCceEE--EecCceEEEEEeeCcccCeeEEEEEEEccccccceeEcc
Confidence 999999999753 3567789999999876532 23322 2222347999999999999999999987643322
Q ss_pred EEEEEEecc-CCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcc
Q psy2166 290 SVNLECVDK-SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAY 368 (805)
Q Consensus 290 ~~~l~v~~~-~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~ 368 (805)
.+.+.+... ....+|.+.........+.+|+.++|.|.+. +.|.+.+.|++++..+.... . .....|.|.+
T Consensus 192 ~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~--g~p~~~i~W~~~~~~~~~~~----~--~~~~~L~i~~ 263 (382)
T 1cs6_A 192 FSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAF--GNPVPQIKWRKLDGSQTSKW----L--SSEPLLHIQN 263 (382)
T ss_dssp CEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEE--EESCCEEEEEECCSCCSCCC----S--BSSSEEEECS
T ss_pred ceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEc--cCCCCEEEEEECCcccccEE----e--cCCcEEEEcc
Confidence 233443321 1112455554433344488999999999998 77889999999887764311 1 1223689999
Q ss_pred cCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceee
Q psy2166 369 VQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQ 448 (805)
Q Consensus 369 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (805)
+..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 264 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-------------------------------------------------- 293 (382)
T 1cs6_A 264 VDFEDEGTYECEAENIKGRDTYQGRIIIHA-------------------------------------------------- 293 (382)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEE--------------------------------------------------
T ss_pred CChhhCEEEEEEEEcCCCeEEEEEEEEEec--------------------------------------------------
Confidence 999999999999999999988888888753
Q ss_pred ecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc
Q psy2166 449 LKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL 528 (805)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~ 528 (805)
+|.+...+... .+.+|+.++|.|.+. |.|.+
T Consensus 294 ----------------------------------------------~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p 324 (382)
T 1cs6_A 294 ----------------------------------------------QPDWLDVITDT-EADIGSDLRWSCVAS--GKPRP 324 (382)
T ss_dssp ----------------------------------------------EEEEEECCCCE-EEETTCCEEEECEEE--EESCC
T ss_pred ----------------------------------------------CCCcccCCCcc-EEcCCCeEEEEEEee--eecCC
Confidence 34444444443 388999999999999 67888
Q ss_pred EEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 529 VVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 529 ~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
.++|+|+|..+..+.++.+. ++ .|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 325 ~v~W~~~g~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~a 382 (382)
T 1cs6_A 325 AVRWLRDGQPLASQNRIEVS--GG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382 (382)
T ss_dssp EEEEEETTEECCCCSSEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEECCEECCCCceEEEE--CC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEeC
Confidence 99999999999887777653 23 599999999999999999999999999999998863
No 22
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.3e-41 Score=365.94 Aligned_cols=368 Identities=22% Similarity=0.281 Sum_probs=272.8
Q ss_pred CCCceecccccccc--cCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCC-cccEEEE
Q psy2166 201 RPPQFTSEFQHLSN--LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKI-EDTGVYT 277 (805)
Q Consensus 201 ~~p~~~~~~~~~~~--v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~ 277 (805)
.+|.|...+.+... ..+|+.++|.|.+ .+.|.+.+.|+|+|..+......+....++ .|.|.++.. +|+|.|+
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~--~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~--~L~i~~~~~~~D~G~Y~ 78 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRA--RANPPATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQ 78 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEE--EEESCCEEEEEETTEECCCSTTSSEEEETT--EEEEESCCHHHHCEEEE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEe--cCCCCCEEEEEECCEECCcCCCccEEeeCC--eEEEecccccccCEEEE
Confidence 46888888877642 3789999999998 567889999999999987653222223333 699999997 9999999
Q ss_pred EEEEcCCeeEE-EEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEcc--CCCceE
Q psy2166 278 CRATNKWGQAE-ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIF--HKNRVK 354 (805)
Q Consensus 278 C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~--~~~~~~ 354 (805)
|.+.|..|... ..+.+.|... +.+.........+.+|+.++|.|.+.+ +.|.+.+.|++++..+. ...+..
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~~-----~~~~~~~~~~~~v~~G~~v~l~C~~~~-~~p~~~i~W~~~~~~~~~~~~~~~~ 152 (382)
T 1cs6_A 79 CVATNARGTVVSREASLRFGFL-----QEFSAEERDPVKITEGWGVMFTCSPPP-HYPALSYRWLLNEFPNFIPADGRRF 152 (382)
T ss_dssp EEEEETTEEEECCCEEEEEEEE-----CCCCSSCCCCEEEETTSCEEECCCCCS-EESCCEEEEEESSTTCBCCCCSSEE
T ss_pred EEEEcCCcEEEecceEEEeecc-----ccccccCCCceEEecCCcEEEEeCCCC-CCCCcEEEEEECCCccccccCceEE
Confidence 99999888653 2455555432 222222223334889999999998642 56788999999987653 223332
Q ss_pred EEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEE-----EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccc
Q psy2166 355 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTR-----ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQ 429 (805)
Q Consensus 355 ~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-----~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 429 (805)
+.... ..|.|.++..+|+|.|+|.+.|..|..... +.+.|...
T Consensus 153 ~~~~~--~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~------------------------------ 200 (382)
T 1cs6_A 153 VSQTT--GNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE------------------------------ 200 (382)
T ss_dssp ECTTT--CCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESC------------------------------
T ss_pred EecCc--eEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchh------------------------------
Confidence 22222 269999999999999999999887433222 23333210
Q ss_pred cCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCccccc
Q psy2166 430 AAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLK 509 (805)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 509 (805)
.....+|.+....+....+.
T Consensus 201 ------------------------------------------------------------~~~~~~P~~~~~~~~~~~~~ 220 (382)
T 1cs6_A 201 ------------------------------------------------------------DARQYAPSIKAKFPADTYAL 220 (382)
T ss_dssp ------------------------------------------------------------CCCCEEEEEEECCCSEEEEE
T ss_pred ------------------------------------------------------------hcccCCCceeccCCCceEEe
Confidence 01134566666555455589
Q ss_pred CCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 510 EGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 510 ~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
+|+.++|.|.+. +.|.+.+.|+|++..+... .
T Consensus 221 ~G~~v~l~C~~~--g~p~~~i~W~~~~~~~~~~--------------------~-------------------------- 252 (382)
T 1cs6_A 221 TGQMVTLECFAF--GNPVPQIKWRKLDGSQTSK--------------------W-------------------------- 252 (382)
T ss_dssp TTCCEEEECEEE--EESCCEEEEEECCSCCSCC--------------------C--------------------------
T ss_pred CCCeEEEEEEEc--cCCCCEEEEEECCcccccE--------------------E--------------------------
Confidence 999999999999 6688899999977543210 0
Q ss_pred eeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccccc
Q psy2166 590 SKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLIL 669 (805)
Q Consensus 590 ~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 669 (805)
.. ....|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 253 -----------------------~~----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~------ 293 (382)
T 1cs6_A 253 -----------------------LS----------SEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA------ 293 (382)
T ss_dssp -----------------------SB----------SSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE------
T ss_pred -----------------------ec----------CCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEec------
Confidence 00 001278888888999999999999998888888888874
Q ss_pred ccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcE
Q psy2166 670 ESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 749 (805)
Q Consensus 670 ~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 749 (805)
+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|+|+|+|..+..+.++.+. .+
T Consensus 294 ---------------------~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~--~~- 346 (382)
T 1cs6_A 294 ---------------------QPDWLDVITDT-EADIGSDLRWSCVAS--GKPRPAVRWLRDGQPLASQNRIEVS--GG- 346 (382)
T ss_dssp ---------------------EEEEEECCCCE-EEETTCCEEEECEEE--EESCCEEEEEETTEECCCCSSEEEE--TT-
T ss_pred ---------------------CCCcccCCCcc-EEcCCCeEEEEEEee--eecCCEEEEEECCEECCCCceEEEE--CC-
Confidence 56666666677 899999999999998 9999999999999999988887653 33
Q ss_pred EEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 750 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 750 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
.|.|.++..+|+|.|+|.|.|.+|....++.|.|+
T Consensus 347 -~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 347 -ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp -EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 69999999999999999999999999999999986
No 23
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=4.4e-41 Score=364.71 Aligned_cols=369 Identities=24% Similarity=0.336 Sum_probs=270.3
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCC--CcEEEEEEcCeEEEEEcCC-----CCccc
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGMVVLEILGT-----KIEDT 273 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~--~~~~~~~~~~~~~L~i~~~-----~~~d~ 273 (805)
....+...|.+. .+.+|+.++|.|.+. .+.|.+.+.|+|+|..+... .+.... .++ .|.|.++ +.+|+
T Consensus 20 ~~~~~~~~P~~~-~v~~G~~v~L~C~~~-~~~p~~~v~W~k~g~~~~~~~~~~~~~~-~~~--~l~i~~~~~~~~~~~D~ 94 (403)
T 3laf_A 20 RSLHFVSEPSDA-VTMRGGNVLLNCSAE-SDRGVPVIKWKKDGLILALGMDDRKQQL-PNG--SLLIQNILHSRHHKPDE 94 (403)
T ss_dssp CSSEEEECCCCE-EECTTCCEEECCEEE-CTTCCCEEEEEETTEECCTTSCTTEEEC-TTS--CEEECSCCCBTTBCSSC
T ss_pred eeEEEEeCCCce-EEecCCcEEEEEEcC-CCCCCceEEEEECCEECccCCcccEEEe-cCC--cEEEeeeeccCCCCCcc
Confidence 445666676666 488999999999984 24678899999999998754 233222 222 4777776 67799
Q ss_pred EEEEEEEEcCCeeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccC--
Q psy2166 274 GVYTCRATNKWGQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH-- 349 (805)
Q Consensus 274 G~Y~C~~~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~-- 349 (805)
|.|+|.+.+..+.. +..+.+.|. .+|.+...+.... +.+|+.+.|.|.+. +.|.+.+.|++++..+..
T Consensus 95 G~Y~C~~~~~~~~~~~s~~~~l~v~-----~p~~~~~~~~~~~-~~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~ 166 (403)
T 3laf_A 95 GLYQCEASLGDSGSIISRTAKVMVA-----GPLRFLSQTESIT-AFMGDTVLLKCEVI--GDPMPTIHWQKNQQDLNPIP 166 (403)
T ss_dssp EEEEEEEECGGGCEEECCCEEEEEC-----CCCEECSCCCCEE-EETTSCEEECCCEE--CSSCCEEEEEESSSBCCCCT
T ss_pred eEEEEEEEeCCCccEEEEEEEEEec-----CCCccccCCCcEE-EEcCCeEEEEEEEc--ccCCCeEEEEECCEeccccC
Confidence 99999999654333 334555554 4566655544443 88999999999997 888899999999988753
Q ss_pred -CCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCc
Q psy2166 350 -KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPV 427 (805)
Q Consensus 350 -~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 427 (805)
..+.... ..+ .|.|.++..+|+|.|+|.|.|..|... ..+.+.|...+..
T Consensus 167 ~~~~~~~~-~~~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~------------------------- 218 (403)
T 3laf_A 167 GDSRVVVL-PSG--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGL------------------------- 218 (403)
T ss_dssp TCCSEEEC-TTS--CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCC-------------------------
T ss_pred CceEEEEc-CCc--eEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCc-------------------------
Confidence 2222222 222 599999999999999999999887643 4466666533210
Q ss_pred cccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCccc
Q psy2166 428 AQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQ 507 (805)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 507 (805)
..++.+...+... .
T Consensus 219 -----------------------------------------------------------------~~~~~~~~~~~~~-~ 232 (403)
T 3laf_A 219 -----------------------------------------------------------------HRQLYFLQRPSNV-I 232 (403)
T ss_dssp -----------------------------------------------------------------CEEEEEEECCCCE-E
T ss_pred -----------------------------------------------------------------ccCceEecCCCce-E
Confidence 0112233333333 3
Q ss_pred ccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEE
Q psy2166 508 LKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 508 v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 587 (805)
+.+|+.++|.|.+. +.|.+.++|+++|..+...........+
T Consensus 233 ~~~g~~~~l~C~~~--~~p~~~~~W~~~~~~~~~~~~~~~~~~~------------------------------------ 274 (403)
T 3laf_A 233 AIEGKDAVLECCVS--GYPPPSFTWLRGEEVIQLRSKKYSLLGG------------------------------------ 274 (403)
T ss_dssp EETTSCEEECCEEE--EESCCEEEEEETTEECCCSSSSEEEETT------------------------------------
T ss_pred ecCCCcEEEEEEcC--CCCCCeEEEEECCeeccCCCceEEECCc------------------------------------
Confidence 78999999999999 6688899999999877533211110000
Q ss_pred EeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccc
Q psy2166 588 CVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL 667 (805)
Q Consensus 588 V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 667 (805)
+ .|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 275 -------------------------------------~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~---- 311 (403)
T 3laf_A 275 -------------------------------------S--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV---- 311 (403)
T ss_dssp -------------------------------------T--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----
T ss_pred -------------------------------------c--EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC----
Confidence 0 166777777777777777777777777777777763
Q ss_pred ccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeC
Q psy2166 668 ILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF 747 (805)
Q Consensus 668 ~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~ 747 (805)
+|.|...+.+. .+.+|+.++|.|.+. |.|.|.|+|+|+|..+..+.++.+.. +
T Consensus 312 -----------------------~p~~~~~~~~~-~~~~g~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~-~ 364 (403)
T 3laf_A 312 -----------------------PPWFLNHPSNL-YAYESMDIEFECAVS--GKPVPTVNWMKNGDVVIPSDYFQIVG-G 364 (403)
T ss_dssp -----------------------EEEEEECCCCE-ECCTTCCEEECCEEE--EESCCEEEEEETTEECCCSSSEEEET-T
T ss_pred -----------------------CCcEeecCcce-EEecCCeEEEEEEEe--eccCCEEEEEECCEECCCCCcEEEec-C
Confidence 56666666666 899999999999998 89999999999999998888776543 3
Q ss_pred cEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 748 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 748 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
+ .|.|.++..+|+|.|+|.|.|.+|..+.++.|.|..
T Consensus 365 ~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 401 (403)
T 3laf_A 365 S--NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPK 401 (403)
T ss_dssp T--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCC
T ss_pred c--cEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeC
Confidence 3 699999999999999999999999999999999864
No 24
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=360.34 Aligned_cols=351 Identities=16% Similarity=0.179 Sum_probs=235.6
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTST 154 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 154 (805)
.++|.+|+.++|.|.+. +.|.+.|.|++++..+....++.. ......+|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 57 ~v~V~~G~~v~L~C~v~--g~P~p~i~W~~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~ 133 (423)
T 3qs7_E 57 AVEVDVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILF 133 (423)
T ss_dssp EEEECSSCCEEEEEECS--CCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEE
T ss_pred cEEEecCCcEEEEEEEE--cCCCCeEEEEECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEE
Confidence 78999999999999998 688999999999988765433221 112345799999999999999999999999888888
Q ss_pred EEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCC
Q psy2166 155 TIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT 234 (805)
Q Consensus 155 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~ 234 (805)
.|.|..++ .+....+. .+..|+.+.|.|.+ .|.|.
T Consensus 134 ~l~V~~~p-----------------------------------------~~~~~~p~--~~~~~~~~~L~C~a--~G~P~ 168 (423)
T 3qs7_E 134 TVSIRNTL-----------------------------------------LYTLRRPY--FRKMENQDALVCIS--ESVPE 168 (423)
T ss_dssp EEEEC----------------------------------------------CEEEEE--EEECSSSSCEEEEE--EESSC
T ss_pred EEEEecCc-----------------------------------------cccccCCc--EeccCCceEEEEEE--eeecC
Confidence 88876322 11100001 13457778899998 68999
Q ss_pred eEEEEEECCEEccCCCc-EEE-EEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEE-EEEEEEeccCCCCCCeEEecCC
Q psy2166 235 MTVEFLYNGKPIEASHR-IRT-VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI-SVNLECVDKSKGQPPKFTSHIK 311 (805)
Q Consensus 235 ~~i~W~k~g~~l~~~~~-~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~-~~~l~v~~~~~~~~p~~~~~~~ 311 (805)
|.|.|+|++..+..... ... ..... ..| ..+|+|.|+|.|.|..|.... .+.|.|... |.+ .+.
T Consensus 169 P~i~W~k~~~~~~~~~~~~~~~~~~~~-~~l-----~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~-----p~~--~~~ 235 (423)
T 3qs7_E 169 PIVEWVLCDSQGESCKEESPAVVKKEE-KVL-----HELFGTDIRCCARNELGRECTRLFTIDLNQT-----PQT--TLP 235 (423)
T ss_dssp CEEEEEEC-------------CEEECC-SEE-----CCCCSSCEEEEEECSSCEEEEECEEEESSSC-----CCS--STT
T ss_pred CeEEEEECCCCCccccccccccccccc-eEE-----ecccCeEEEEEEEcCCCCcceeeEEEEEecC-----Ccc--CCC
Confidence 99999999876532110 000 01111 111 578999999999999887654 355655432 222 111
Q ss_pred CcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEE------eCcEEEEEEcccCcCCceEEEEEEEeCc
Q psy2166 312 SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS------DFGFVVMDIAYVQSHDSGEYVCRAWNKY 385 (805)
Q Consensus 312 ~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~------~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 385 (805)
...+.+|+.+.|.|.+.+ ..|.+.|.|+|+|..+.....+.... ......|.|.++..+|+|.|+|.|.|.
T Consensus 236 -~~~v~~G~~v~L~C~~~g-~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~- 312 (423)
T 3qs7_E 236 -QLFLKVGEPLWIRCKAVH-VNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH- 312 (423)
T ss_dssp -EEEEETTSCEEEEEEEEE-SSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE-
T ss_pred -ceEEeCCCeEEEEEEEEc-CCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC-
Confidence 233789999999999983 37778999999999886543221111 112236999999999999999999987
Q ss_pred eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccC
Q psy2166 386 GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVT 465 (805)
Q Consensus 386 g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (805)
....+.|.|..
T Consensus 313 --~~~~~~L~V~~------------------------------------------------------------------- 323 (423)
T 3qs7_E 313 --PSQSALVTIVE------------------------------------------------------------------- 323 (423)
T ss_dssp --EEEEEEEEEES-------------------------------------------------------------------
T ss_pred --CCceEEEEEEe-------------------------------------------------------------------
Confidence 56667777753
Q ss_pred CCCceEEEeecccCCCCCCcccccCCCCCCCceEecC-CCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc
Q psy2166 466 DPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQI-SDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR 544 (805)
Q Consensus 466 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~ 544 (805)
+|.+...+ .....+.+|+++.|.|.+. |.|.|.|+|+|||+.|..+.+
T Consensus 324 -----------------------------~p~i~~~~~~~~~~v~~G~~v~l~C~~~--g~P~p~i~W~k~g~~l~~~~~ 372 (423)
T 3qs7_E 324 -----------------------------KGFINATNSSEDYEIDQYEEFCFSVRFK--AYPQIRCTWTFSRKSFPCEQK 372 (423)
T ss_dssp -----------------------------SCEEEEC---CEECCCTTCCCCEEEEEE--EESCCEEEEEETTEEEECBCC
T ss_pred -----------------------------CCcceEcCCCccEEecCCCeEEEEEEEE--EcCCCeEEEEECCEECCCccc
Confidence 33333322 1233478999999999999 678899999999999965431
Q ss_pred eEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 545 YRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 545 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.. .+.. .+.+.....+|+|.|+|.|.|..|..+.++.|.|...+.
T Consensus 373 ~~---~~~~-~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~ 417 (423)
T 3qs7_E 373 GL---DNGY-SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTK 417 (423)
T ss_dssp BC---SSSS-EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC------
T ss_pred cc---cCCc-EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCc
Confidence 00 0111 122244567899999999999999999999999988765
No 25
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=2.9e-41 Score=366.27 Aligned_cols=376 Identities=21% Similarity=0.317 Sum_probs=264.3
Q ss_pred CCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEc----CCCCcccEE
Q psy2166 200 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEIL----GTKIEDTGV 275 (805)
Q Consensus 200 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~ 275 (805)
..||.|...+.....+.+|+.++|.|.+ .|.|.+.+.|+|+|..+................|.|. +++.+|+|.
T Consensus 14 ~~~P~i~~~~~~~~~v~~G~~v~l~C~~--~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~ 91 (404)
T 3p3y_A 14 TQPPTITKQSAKDHIVDPRDNILIECEA--KGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGE 91 (404)
T ss_dssp CCCCCEEEECCTTCEECSSSCCCCCEEE--CCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEE
T ss_pred cCCCcccccCCccEEEcCCCCEEEEEEe--cCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEE
Confidence 3678888655444468999999999998 7889999999999998864322211111122345554 788999999
Q ss_pred EEEEEEcCCeeE-EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEE-ccCCCce
Q psy2166 276 YTCRATNKWGQA-EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP-IFHKNRV 353 (805)
Q Consensus 276 Y~C~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~-l~~~~~~ 353 (805)
|+|.+.|..|.. +..+.|.|.. +|.+.........+.+|+.++|.|.+. .+.|.+.+.|++++.. +....++
T Consensus 92 Y~C~a~n~~g~~~s~~~~l~V~~-----~p~~~~~~~~~~~v~~G~~v~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~ 165 (404)
T 3p3y_A 92 YQCFARNKFGTALSNRIRLQVSK-----SPLWPKENLDPVVVQEGAPLTLQCNPP-PGLPSPVIFWMSSSMEPITQDKRV 165 (404)
T ss_dssp EEEEEECSSCEEEEEEEEEEECC-----CCCCCCCCCCCEEEETTSCEEECCCCC-CCSSCCEEEEECTTSCBCCCCSSE
T ss_pred EEEEEEcCCCeEeeeeEEEEEec-----cCccccCCCCCeEEccCCcEEEEeCCC-CCCCCCeEEEeCCCccccCCCCcE
Confidence 999999998876 4667777764 333222222223488999999999983 2888999999998744 3334444
Q ss_pred EEEEeCcEEEEEEcccCcCC-ceEEEEEEEeCceeeEEE---EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccc
Q psy2166 354 KMVSDFGFVVMDIAYVQSHD-SGEYVCRAWNKYGEDFTR---ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQ 429 (805)
Q Consensus 354 ~~~~~~~~~~l~i~~v~~~d-~G~Y~C~a~n~~g~~~~~---~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 429 (805)
....+ + .|.|.++..+| +|.|+|.|.|..|..... ..+.|...+.
T Consensus 166 ~~~~~-~--~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~---------------------------- 214 (404)
T 3p3y_A 166 SQGHN-G--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRG---------------------------- 214 (404)
T ss_dssp EECTT-S--CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSC----------------------------
T ss_pred EEcCC-C--cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCC----------------------------
Confidence 43222 2 48899999999 599999999988754322 3444432111
Q ss_pred cCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCC--Cccc
Q psy2166 430 AAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQIS--DVTQ 507 (805)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~ 507 (805)
....+|.+..... ....
T Consensus 215 -------------------------------------------------------------~~~~~p~~~~~~~~~~~~~ 233 (404)
T 3p3y_A 215 -------------------------------------------------------------VAERTPSFMYPQGTASSQM 233 (404)
T ss_dssp -------------------------------------------------------------CCCCCCCBSSSCSSEEEEE
T ss_pred -------------------------------------------------------------ccccCCccccccCCCCCce
Confidence 0123344433221 1233
Q ss_pred ccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEE
Q psy2166 508 LKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 508 v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 587 (805)
+.+|+.++|.|.+. |.|.+.++|+|+|..+..+.. .....++ .
T Consensus 234 ~~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~-~~~~~~~--~-------------------------------- 276 (404)
T 3p3y_A 234 VLRGMDLLLECIAS--GVPTPDIAWYKKGGDLPSDKA-KFENFNK--A-------------------------------- 276 (404)
T ss_dssp EETTSCEEEECCBC--CSSCCEEEEEETTBCCCTTTE-EEEGGGT--E--------------------------------
T ss_pred EecCCCEEEEEEEC--CCCCCcEEEEECCEECCCCcc-cccccCc--e--------------------------------
Confidence 78999999999998 778889999999988755432 1111001 1
Q ss_pred EeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccc
Q psy2166 588 CVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL 667 (805)
Q Consensus 588 V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 667 (805)
|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 277 -----------------------------------------L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~---- 311 (404)
T 3p3y_A 277 -----------------------------------------LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA---- 311 (404)
T ss_dssp -----------------------------------------EEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE----
T ss_pred -----------------------------------------EEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC----
Confidence 55666666666666666666666666666666653
Q ss_pred ccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCC-eEEEee
Q psy2166 668 ILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHR-IRTVHA 746 (805)
Q Consensus 668 ~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~-~~~~~~ 746 (805)
+|.|...+.+. .+.+|+.++|.|.+. |+|.|.|+|+|+|..+..... ......
T Consensus 312 -----------------------~p~~~~~~~~~-~v~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~ 365 (404)
T 3p3y_A 312 -----------------------APYWLDEPKNL-ILAPGEDGRLVCRAN--GNPKPTVQWMVNGEPLQSAPPNPNREVA 365 (404)
T ss_dssp -----------------------EEEEEECCCCE-EECTTCCEEEECEEE--EESCCEEEEEETTEEGGGSCCCTTEEEE
T ss_pred -----------------------CCeeeccCCcc-eeecCCcEEEEEEcc--ccCCCceEEEECCEecCCCCCCceEEec
Confidence 45555556666 889999999999999 999999999999999986642 222334
Q ss_pred CcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 747 FGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 747 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
++ .|.|.++..+|+|.|+|.|.|.+|....++.|.|.
T Consensus 366 ~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 366 GD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp TT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred CC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 44 79999999999999999999999999999999985
No 26
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=7.2e-41 Score=361.01 Aligned_cols=358 Identities=19% Similarity=0.286 Sum_probs=261.3
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEE-CCEecCCCCceEEEecCcEEEEEEcccccCC------Ce
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF-NGKPLELGSRFKTTADFGFVTLDLTEVYDRD------QG 137 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k-~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D------~G 137 (805)
+|.|+..+...+.+.+|+.++|.|.+. |.|.+.|+|+| ||..+....++.....++ +|.|.+++.+| +|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~--g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G 78 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKAS--GNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQ 78 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEE--EESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECC--CCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCc
Confidence 688888887667888999999999998 68889999999 888887654443333333 79999999997 99
Q ss_pred EEEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 138 IYTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
.|+|.|.|..|... ....|.|..+ |.+...+... .+.
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~~~-----------------------------------------p~~~~~~~~~-~v~ 116 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAVVA-----------------------------------------QYYEADVNKE-HVI 116 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEECC-----------------------------------------CCCCCBCCCE-EEE
T ss_pred eEEEEEEccCCeEEecceEEEEccc-----------------------------------------cccccCccce-eee
Confidence 99999999988753 3455555432 2222222222 477
Q ss_pred CCceEEEEEEEeeCCC---CCeEEEEEECCEEccC-----CCcEEEEEEcCeEEEEEcCCCCccc-EEEEEEEEcCCee-
Q psy2166 217 EGEIAHFEASLIPVGD---QTMTVEFLYNGKPIEA-----SHRIRTVHAFGMVVLEILGTKIEDT-GVYTCRATNKWGQ- 286 (805)
Q Consensus 217 ~g~~~~l~C~~~~~~~---p~~~i~W~k~g~~l~~-----~~~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~~~n~~g~- 286 (805)
+|+.++|.|.+ .+. |.+.+.|++++..+.. ..++... .+ ..|.|.+++.+|+ |.|+|.+.|..+.
T Consensus 117 ~G~~v~l~C~~--~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~-~~--~~L~i~~v~~~d~~G~Y~C~~~n~~~~~ 191 (388)
T 2v5m_A 117 RGNSAVIKCLI--PSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVL-PS--GELHIREVGPEDGYKSYQCRTKHRLTGE 191 (388)
T ss_dssp TTSCEEECCBC--CTTTTTTEEEEEEEETTCCEECSSSCBTTTEEEC-TT--SCEEESSCCGGGGGCCEEEEEEETTTCC
T ss_pred cCCcEEEEEEC--cCCCCCCcceEEEEeCCCcccccccCCCCcEEEc-cC--CcEEEecCCccccCeeEEEEeccCCCCc
Confidence 99999999987 443 3489999999877632 2233222 12 3699999999999 9999999987533
Q ss_pred EEEE---EEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEc------cCCCceEEEE
Q psy2166 287 AEIS---VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI------FHKNRVKMVS 357 (805)
Q Consensus 287 ~~~~---~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l------~~~~~~~~~~ 357 (805)
...+ ..+.|........|.+.........+.+|+.++|.|.+. +.|.+.|.|++++..+ ....++. .
T Consensus 192 ~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~--~ 267 (388)
T 2v5m_A 192 TRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQ--GFPAPSFRWYKFIEGTTRKQAVVLNDRVK--Q 267 (388)
T ss_dssp EEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCE--EESCCEEEEEEECTTSSCEEECCCSSSEE--E
T ss_pred eeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECC--CCCCCEEEEEecCCCCcccccccccCcee--c
Confidence 2222 234444321111122211112222377899999999997 7788999999975432 2233332 2
Q ss_pred eCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCC
Q psy2166 358 DFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAP 437 (805)
Q Consensus 358 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (805)
... .|.|.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 268 ~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------------------------------------- 307 (388)
T 2v5m_A 268 VSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP-------------------------------------- 307 (388)
T ss_dssp ETT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE--------------------------------------
T ss_pred ccC--EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCC--------------------------------------
Confidence 223 6999999999999999999999999888888887543
Q ss_pred ceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEE
Q psy2166 438 KFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 517 (805)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~ 517 (805)
|.+...+... .+.+|+.++|.
T Consensus 308 ----------------------------------------------------------p~~~~~~~~~-~v~~g~~~~l~ 328 (388)
T 2v5m_A 308 ----------------------------------------------------------LSAKIDPPTQ-TVDFGRPAVFT 328 (388)
T ss_dssp ----------------------------------------------------------EEEEEESSEE-EECTTSCEEEE
T ss_pred ----------------------------------------------------------CccccCCCcE-EecCCCCEEEE
Confidence 3333333333 38899999999
Q ss_pred EEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 518 ARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 518 C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
|.+. |.|.+.|+|+|||..+..+. ..|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 329 C~~~--g~p~p~i~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 329 CQYT--GNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEE--EECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEec--cccCCeEEEEECCEECccCC----------CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 9998 67888999999999986542 25999999999999999999999999999999887
No 27
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=370.23 Aligned_cols=399 Identities=14% Similarity=0.148 Sum_probs=266.4
Q ss_pred hhhhHHhhhhhhcCccccCCCCCC------------CC----cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCC--c
Q psy2166 37 GLEKVQEVEHALAGKYQRQPSGPE------------ET----FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPN--L 98 (805)
Q Consensus 37 g~~~i~~~~~~d~g~y~c~~~~~~------------~~----~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~--~ 98 (805)
+.|.|.+++.+|+|.|+|.+.+.. .+ ..+|.+...+. ...+.+|+.++|.|.+. +.|. +
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~-~~~~~~g~~v~l~C~~~--g~~p~~~ 146 (523)
T 2rcj_C 70 ASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPP-SSEELQANKATLVCLIS--DFYPGAV 146 (523)
T ss_pred EEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCC-cccccCCCceEEEEEec--cccCCce
Confidence 468899999999999999766432 11 23455554443 44667899999999998 4443 4
Q ss_pred eEEEEECCEecCCCCceEEE---ecCc---EEEEEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCC
Q psy2166 99 KIEWIFNGKPLELGSRFKTT---ADFG---FVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPK 172 (805)
Q Consensus 99 ~v~W~k~g~~i~~~~~~~~~---~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~ 172 (805)
.|+|+|||..+..+.++... .++. ...|.|.+++.+|+|.|+|.|.|..|.......+.+...
T Consensus 147 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~----------- 215 (523)
T 2rcj_C 147 TVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSA----------- 215 (523)
T ss_pred EEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCC-----------
Confidence 99999999988765443211 1221 236999999999999999999998776554443322110
Q ss_pred CcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCC
Q psy2166 173 GEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-QTM-TVEFLYNGKPIEASH 250 (805)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~-p~~-~i~W~k~g~~l~~~~ 250 (805)
...+|.+....+.. .+.+|+.+.|.|.+ .+. |.+ +|.|+|+|..+....
T Consensus 216 --------------------------~~~~P~v~~~~~~~-~~~~G~~~~l~C~~--~g~~P~p~~v~W~k~g~~~~~~~ 266 (523)
T 2rcj_C 216 --------------------------STKGPSVFPLAPSS-KSTSGGTAALGCLV--KDYFPQPVTVSWNSGALTSGVHT 266 (523)
T ss_pred --------------------------CCcCCEEEecCCCc-ccccCCceEEEEEE--eceeCCCeEEEEecCCcccceEe
Confidence 01345444222222 36799999999998 454 666 899999998764321
Q ss_pred cEEEEEEcC----eEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcc-cccCCCeEEEE
Q psy2166 251 RIRTVHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLE-GLKDGDSAHFE 325 (805)
Q Consensus 251 ~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~-~~~~g~~~~l~ 325 (805)
.......++ .+.|.|.+++.+| |.|+|.|.|..|.......+.+. ..|.+........ .+.+|+.+.|.
T Consensus 267 ~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~-----~~P~~~~~~p~~~~~v~~g~~~~l~ 340 (523)
T 2rcj_C 267 FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPL-----SLPSVFLFPPKPKDTLMISRTPEVT 340 (523)
T ss_pred CCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCC-----cCceEEecCCCchhhcccCCceEEE
Confidence 111111222 3589999999999 99999999999987766666654 2344333222222 26789999999
Q ss_pred EEEeecCCC----CcEEEEEECCEEccCCCceEE-EEeCc----EEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEE
Q psy2166 326 CTLTPVNDP----ELKVEWFHNGKPIFHKNRVKM-VSDFG----FVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKC 396 (805)
Q Consensus 326 C~~~~~~~p----~~~v~W~~~g~~l~~~~~~~~-~~~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 396 (805)
|.+. +.+ .+.|+|+|+|..+........ ...++ ...|.|.++..+|+|.|+|.|.|..+.......+.+
T Consensus 341 C~~~--g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~ 418 (523)
T 2rcj_C 341 CVVV--DVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISK 418 (523)
T ss_pred EEEe--cccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEc
Confidence 9998 433 369999999999875443221 11122 235889999999999999999998776554444432
Q ss_pred EecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeec
Q psy2166 397 FGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSN 476 (805)
Q Consensus 397 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 476 (805)
.
T Consensus 419 ~------------------------------------------------------------------------------- 419 (523)
T 2rcj_C 419 A------------------------------------------------------------------------------- 419 (523)
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred ccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE--EeeCCE-
Q psy2166 477 FFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT--FHDFGI- 553 (805)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~~~~~- 553 (805)
..+..+|.+....+....+..|+ ++|.|.+.+...|.+.|+|+|||+++........ ..++..
T Consensus 420 -------------~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~ 485 (523)
T 2rcj_C 420 -------------KGQPREPQVYTLPPSREEMTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFF 485 (523)
T ss_pred -------------cCCCCCCEEEEeCCChHHccCCc-eEEEEEEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEE
Confidence 01245677666554443344555 9999999953334459999999999975433222 223322
Q ss_pred --EEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 554 --VILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 554 --~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
+.|.|.....+|+|.|+|.|.|....
T Consensus 486 ~~~~l~v~~~~~~~~g~Y~C~a~n~~l~ 513 (523)
T 2rcj_C 486 LYSKLTVDKSRWQQGNVFSCSVMHEALH 513 (523)
T ss_pred EEEEEEEChHHccCCCeEEEEEEcCCcC
Confidence 34666666667899999999997643
No 28
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=7.5e-41 Score=363.07 Aligned_cols=375 Identities=18% Similarity=0.273 Sum_probs=272.9
Q ss_pred CCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC--CceEEEecCcEEEEEEc----ccccC
Q psy2166 61 ETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG--SRFKTTADFGFVTLDLT----EVYDR 134 (805)
Q Consensus 61 ~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~--~~~~~~~~~~~~~L~I~----~~~~~ 134 (805)
....+|.+....+..+.+.+|+.++|.|.+. |.|.+.|+|+|||..+... .++.+...++ +|.|. +++.+
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~--g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~l~i~~~~~~~~~~ 87 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAK--GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG--TLVIDFRSGGRPEE 87 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEEC--CSSCCEEEEEETTEECCGGGCSSCBCCSSSC--CCBCCCTTTCCTTS
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEec--CCCCCeEEEEECCEEeeeecCCcceEecCCc--eEEEEeccCCCCcc
Confidence 4557888888766688999999999999998 6889999999999988643 3444433333 45554 88999
Q ss_pred CCeEEEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccc
Q psy2166 135 DQGIYTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLS 213 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 213 (805)
|+|.|+|.|.|..|... ....|.|...+.. ........
T Consensus 88 D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~-----------------------------------------~~~~~~~~ 126 (404)
T 3p3y_A 88 YEGEYQCFARNKFGTALSNRIRLQVSKSPLW-----------------------------------------PKENLDPV 126 (404)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEECCCCCC-----------------------------------------CCCCCCCE
T ss_pred CCEEEEEEEEcCCCeEeeeeEEEEEeccCcc-----------------------------------------ccCCCCCe
Confidence 99999999999988764 4566777543311 11111112
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEc-cCCCcEEEEEEcCeEEEEEcCCCCcc-cEEEEEEEEcCCeeEE---
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI-EASHRIRTVHAFGMVVLEILGTKIED-TGVYTCRATNKWGQAE--- 288 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l-~~~~~~~~~~~~~~~~L~i~~~~~~d-~G~Y~C~~~n~~g~~~--- 288 (805)
.+.+|+.++|.|.+. .+.|.+.+.|++++... ....++.. ..+ ..|.|.+++.+| +|.|+|.+.|..+...
T Consensus 127 ~v~~G~~v~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~~~-~~~--~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~ 202 (404)
T 3p3y_A 127 VVQEGAPLTLQCNPP-PGLPSPVIFWMSSSMEPITQDKRVSQ-GHN--GDLYFSNVMLQDMQTDYSCNARFHFTHTIQQK 202 (404)
T ss_dssp EEETTSCEEECCCCC-CCSSCCEEEEECTTSCBCCCCSSEEE-CTT--SCEEESSCCSGGGSSCBEEEEECTTTCCEEEC
T ss_pred EEccCCcEEEEeCCC-CCCCCCeEEEeCCCccccCCCCcEEE-cCC--CcEEEEeeeeccCCcceEEEEEeccccceecc
Confidence 478999999999863 47788999999987543 33344332 222 369999999999 5999999999876532
Q ss_pred EEEEEEEeccC--CCCCCeEEecCC--CcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEE
Q psy2166 289 ISVNLECVDKS--KGQPPKFTSHIK--SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 364 (805)
Q Consensus 289 ~~~~l~v~~~~--~~~~p~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l 364 (805)
..+.+.+.... ...+|.+..... ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+..... .....+. .|
T Consensus 203 ~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~-~~~~~~~--~L 277 (404)
T 3p3y_A 203 NPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIAS--GVPTPDIAWYKKGGDLPSDKA-KFENFNK--AL 277 (404)
T ss_dssp CCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBC--CSSCCEEEEEETTBCCCTTTE-EEEGGGT--EE
T ss_pred CceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEEC--CCCCCcEEEEECCEECCCCcc-cccccCc--eE
Confidence 22444443221 112333322211 122377899999999987 889999999999998865543 2222222 69
Q ss_pred EEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeec
Q psy2166 365 DIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQIS 444 (805)
Q Consensus 365 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (805)
.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 278 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~---------------------------------------------- 311 (404)
T 3p3y_A 278 RITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA---------------------------------------------- 311 (404)
T ss_dssp EESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE----------------------------------------------
T ss_pred EEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC----------------------------------------------
Confidence 9999999999999999999999988888888753
Q ss_pred ceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCC
Q psy2166 445 DVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVT 524 (805)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g 524 (805)
+|.+...+.... +.+|+.++|.|.+. |
T Consensus 312 --------------------------------------------------~p~~~~~~~~~~-v~~g~~~~l~C~~~--g 338 (404)
T 3p3y_A 312 --------------------------------------------------APYWLDEPKNLI-LAPGEDGRLVCRAN--G 338 (404)
T ss_dssp --------------------------------------------------EEEEEECCCCEE-ECTTCCEEEECEEE--E
T ss_pred --------------------------------------------------CCeeeccCCcce-eecCCcEEEEEEcc--c
Confidence 344444444433 88999999999999 6
Q ss_pred CCCcEEEEEECCEEccCCCc-eEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 525 DPDLVVEWFYNGKKLPHGHR-YRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 525 ~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
.|.+.++|+++|..+..... ......++ .|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 339 ~p~p~v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 339 NPKPTVQWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp ESCCEEEEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cCCCceEEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 78889999999999975431 11222333 599999999999999999999999999999998864
No 29
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=3e-41 Score=363.94 Aligned_cols=365 Identities=21% Similarity=0.323 Sum_probs=267.0
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEE-CCEEccCCCcEEEEEEcCeEEEEEcCCCCcc------c
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY-NGKPIEASHRIRTVHAFGMVVLEILGTKIED------T 273 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d------~ 273 (805)
.+|.|...+.+...+.+|+.++|.|.+ .|.|.++|.|+| +|..+.....+.....++ .|.|.+++.+| +
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~--~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~ 77 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKA--SGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHA 77 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEE--EEESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHE
T ss_pred CCCchhhCCCceEEEEcCccEEEEEEC--CCCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccC
Confidence 358888888776668899999999998 578889999999 888887554433333333 69999999987 9
Q ss_pred EEEEEEEEcCCeeE-EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC---CcEEEEEECCEEccC
Q psy2166 274 GVYTCRATNKWGQA-EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP---ELKVEWFHNGKPIFH 349 (805)
Q Consensus 274 G~Y~C~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p---~~~v~W~~~g~~l~~ 349 (805)
|.|+|.|.|..|.. +..+.+.+. .+|.+...+.... +.+|+.++|.|.+. +.+ .+.+.|++++..+..
T Consensus 78 G~Y~C~a~n~~g~~~s~~~~v~v~-----~~p~~~~~~~~~~-v~~G~~v~l~C~~~--~~~~~~~~~v~W~~~~~~~~~ 149 (388)
T 2v5m_A 78 QVYACLARNQFGSIISRDVHVRAV-----VAQYYEADVNKEH-VIRGNSAVIKCLIP--SFVADFVEVVSWHTDEEENYF 149 (388)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEE-----CCCCCCCBCCCEE-EETTSCEEECCBCC--TTTTTTEEEEEEEETTCCEEC
T ss_pred ceEEEEEEccCCeEEecceEEEEc-----cccccccCcccee-eecCCcEEEEEECc--CCCCCCcceEEEEeCCCcccc
Confidence 99999999998864 345666655 3444444444433 88999999999997 443 378999999876532
Q ss_pred -----CCceEEEEeCcEEEEEEcccCcCCc-eEEEEEEEeCceeeEE-E---EEEEEEecccccccCCChhHHHHHHHhh
Q psy2166 350 -----KNRVKMVSDFGFVVMDIAYVQSHDS-GEYVCRAWNKYGEDFT-R---ATIKCFGKGGVYLDSLQPESLARIRELE 419 (805)
Q Consensus 350 -----~~~~~~~~~~~~~~l~i~~v~~~d~-G~Y~C~a~n~~g~~~~-~---~~l~V~~~~~~~~~~~~p~~~~~~~~~~ 419 (805)
..++.+..+ + .|.|.++..+|+ |.|+|.+.|..+.... . ..+.|..+..
T Consensus 150 ~~~~~~~~~~~~~~-~--~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~------------------ 208 (388)
T 2v5m_A 150 PGAEYDGKYLVLPS-G--ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIS------------------ 208 (388)
T ss_dssp SSSCBTTTEEECTT-S--CEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCS------------------
T ss_pred cccCCCCcEEEccC-C--cEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCc------------------
Confidence 234433322 2 599999999999 9999999998643322 1 2344432110
Q ss_pred hccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceE
Q psy2166 420 NAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFI 499 (805)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 499 (805)
..+|.+.
T Consensus 209 -------------------------------------------------------------------------~~~p~~~ 215 (388)
T 2v5m_A 209 -------------------------------------------------------------------------SSAPRTP 215 (388)
T ss_dssp -------------------------------------------------------------------------CEEEECC
T ss_pred -------------------------------------------------------------------------CCCCcCc
Confidence 0111111
Q ss_pred ecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 500 TQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 500 ~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
........+.+|+.++|.|.+. |.|.+.|+|+|++..+.... .+.
T Consensus 216 ~~~~~~~~v~~G~~v~l~C~~~--g~p~p~v~W~~~~~~~~~~~-------------~~~-------------------- 260 (388)
T 2v5m_A 216 ALVQKPLELMVAHTISLLCPAQ--GFPAPSFRWYKFIEGTTRKQ-------------AVV-------------------- 260 (388)
T ss_dssp SSCCCCEEEETTSCEEECCCCE--EESCCEEEEEEECTTSSCEE-------------ECC--------------------
T ss_pred cccCCceEEeeCCcEEEEEECC--CCCCCEEEEEecCCCCcccc-------------ccc--------------------
Confidence 1111122377899999999998 66888999999764221100 000
Q ss_pred eEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2166 580 DVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659 (805)
Q Consensus 580 ~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 659 (805)
.+.++.. .++ .|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 261 ----------------------------------~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 302 (388)
T 2v5m_A 261 ----------------------------------LNDRVKQ--VSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVL 302 (388)
T ss_dssp ----------------------------------CSSSEEE--ETT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred ----------------------------------ccCceec--ccC--EEEECcCCHHHCeEEEEEEecCCCceeEEEEE
Confidence 0000000 011 38999999999999999999999999999999
Q ss_pred EEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC
Q psy2166 660 KCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 739 (805)
Q Consensus 660 ~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~ 739 (805)
.|.. ||.+...+.+. .+.+|+.+.|.|.+. |+|.|.|+|+|||..+..+.
T Consensus 303 ~V~~---------------------------~p~~~~~~~~~-~v~~g~~~~l~C~~~--g~p~p~i~W~~~g~~i~~~~ 352 (388)
T 2v5m_A 303 TVTA---------------------------PLSAKIDPPTQ-TVDFGRPAVFTCQYT--GNPIKTVSWMKDGKAIGHSE 352 (388)
T ss_dssp EEEE---------------------------EEEEEEESSEE-EECTTSCEEEEEEEE--EECCCEEEEEETTEECSCCS
T ss_pred EEeC---------------------------CCccccCCCcE-EecCCCCEEEEEEec--cccCCeEEEEECCEECccCC
Confidence 9985 45566666666 899999999999998 99999999999999987543
Q ss_pred CeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEE
Q psy2166 740 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 784 (805)
Q Consensus 740 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 784 (805)
+ .|.|.++..+|+|.|+|.|.|.+|....+++|+|
T Consensus 353 --------~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 353 --------S--VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp --------S--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred --------C--EEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 2 6999999999999999999999999999999987
No 30
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=373.18 Aligned_cols=410 Identities=14% Similarity=0.141 Sum_probs=260.8
Q ss_pred EEEEEEEEecCCc-----eeccccCC-----C--Cc---hhhhhHHhhhhhhcCccccCCCCCCCCc-------CCCeEE
Q psy2166 12 TTSGTLKCLGQKD-----IYLETQHP-----M--GA---AGLEKVQEVEHALAGKYQRQPSGPEETF-------AKPVFI 69 (805)
Q Consensus 12 ~~~~~l~~~~~~~-----~~~~~~~~-----~--~~---~g~~~i~~~~~~d~g~y~c~~~~~~~~~-------~~p~~~ 69 (805)
..+++|.|..... .|+..+.+ . .. .-.|.|.+++.+|+|.|+|.+.+..... ..|.+.
T Consensus 63 g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~v~~~~~ 142 (527)
T 3qs9_E 63 SASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLL 142 (527)
T ss_dssp SCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC----
T ss_pred cccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEEECCcee
Confidence 3568899987542 34432221 1 10 1127799999999999999876543221 112222
Q ss_pred ecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCee
Q psy2166 70 VPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGE 149 (805)
Q Consensus 70 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 149 (805)
..+........|+.++|.|.+. |.|.|.|+|++++..+..... ............++.+|+|.|+|.|.|..|.
T Consensus 143 ~~~~~p~~~~~~~~~~L~C~a~--G~P~P~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~ 216 (527)
T 3qs9_E 143 YTLRRPYFRKMENQDALVCISE--SVPEPIVEWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGR 216 (527)
T ss_dssp -CEEEEEEEECSSSSCEEEEEE--ESSCCEEEEEEC-----------------CEEECCSEECCCCSSCEEEEEECSSCE
T ss_pred eccCCCcEEecCCceEEEEEEc--eecCCeEEEEECCCCCccccc----cCCcEEEEeeeeccccCCEEEEEEEEeCCCc
Confidence 2222223445688889999998 789999999999876542111 1111112334456689999999999999988
Q ss_pred EEEE-EEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEe
Q psy2166 150 TFTS-TTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLI 228 (805)
Q Consensus 150 ~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~ 228 (805)
.... ..|.|..++ .+ .+.+ ..+.+|+.+.|.|.+.
T Consensus 217 ~~~~~~~l~V~~~p-----------------------------------------~~--~p~~-~~v~~G~~v~L~C~~~ 252 (527)
T 3qs9_E 217 ECTRLFTIDLNQTP-----------------------------------------QT--TLPQ-LFLKVGEPLWIRCKAV 252 (527)
T ss_dssp EEEECEEEESSSCC-----------------------------------------CC--SCCE-EEECTTSCEEEEEEEE
T ss_pred ccceEEEEEEeccC-----------------------------------------cc--CCCc-eEEeCCCeEEEEEEEc
Confidence 7654 555554322 11 1112 2478999999999984
Q ss_pred eCCCCCeEEEEEECCEEccCCCcEEEEE------EcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCC
Q psy2166 229 PVGDQTMTVEFLYNGKPIEASHRIRTVH------AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQ 302 (805)
Q Consensus 229 ~~~~p~~~i~W~k~g~~l~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~ 302 (805)
.+.|.+.|+|+|+|..+.....+.... ......|.|.+++.+|+|.|+|.|.|. ....+.|.|. .
T Consensus 253 -~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~-----~ 323 (527)
T 3qs9_E 253 -HVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIV-----E 323 (527)
T ss_dssp -ESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC------
T ss_pred -cCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEE-----c
Confidence 278899999999999876654332211 112357999999999999999999987 5666777776 3
Q ss_pred CCeEEecCC-CcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 303 PPKFTSHIK-SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 303 ~p~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+|.+...+. ....+.+|+.+.|.|.+. +.|.|.|+|+|+|..+....+... + ...|.|.++..+|+|.|+|.|
T Consensus 324 ~p~i~~~~~~~~~~v~~G~~v~L~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~--~--~~~L~I~~v~~~D~G~YtC~A 397 (527)
T 3qs9_E 324 KGFINATNSSEDYEIDQYEEFCFSVRFK--AYPQIRCTWTFSRKSFPCEQKGLD--N--GYSISKFCNHKHQPGEYIFHA 397 (527)
T ss_dssp -CEEECCCSCCEECCCTTCCCCEEEEEE--EESCCEEEEEETTEEEECBCCBCS--S--SSEEEEECCCTTCCSCEEEEE
T ss_pred cCccccccCcccEEEcCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCccccc--C--CcEEEEecCCcccCEEEEEEE
Confidence 444443332 223478899999999998 788899999999999875544221 2 236889999999999999999
Q ss_pred EeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEE
Q psy2166 382 WNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL 461 (805)
Q Consensus 382 ~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (805)
.|..|.....+.|.|.
T Consensus 398 ~N~~g~~~~~~~L~V~---------------------------------------------------------------- 413 (527)
T 3qs9_E 398 ENDDAQFTKMFTLNIR---------------------------------------------------------------- 413 (527)
T ss_dssp EETTEEEEEEEEEC------------------------------------------------------------------
T ss_pred EeCCCcEEEEEEEEEe----------------------------------------------------------------
Confidence 9999998888877763
Q ss_pred eccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccC
Q psy2166 462 TPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPH 541 (805)
Q Consensus 462 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~ 541 (805)
.+|.|..... | .+|.|.+. |.|.|.|+|++++.....
T Consensus 414 --------------------------------~~P~i~~~~~-------~--~~l~C~a~--g~P~p~i~W~~~~~~~~~ 450 (527)
T 3qs9_E 414 --------------------------------RKPQVLAEAS-------A--SQASCFSD--GYPLPSWTWKKCSDKSPN 450 (527)
T ss_dssp --------------------------------CCCEEEECCC-------C--E---EEEE--CSSCCEEEEECCC-----
T ss_pred --------------------------------cCCeEEEeCC-------C--CEEEEEEE--EEcCCeEEEEECCCCcCC
Confidence 5566654321 2 35899999 789999999988765421
Q ss_pred CCc------e-----EEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 542 GHR------Y-----RTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 542 ~~~------~-----~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
... . ..........+.|.-...+|+|.|+|.|.|..|.....+.|.|..+-.
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p~~ 513 (527)
T 3qs9_E 451 CTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFP 513 (527)
T ss_dssp CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC-------
T ss_pred CccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCCce
Confidence 110 0 001111122333433346799999999999999999999997765433
No 31
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.3e-40 Score=360.09 Aligned_cols=369 Identities=22% Similarity=0.245 Sum_probs=269.1
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCC-ceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGS-RFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
+..+|.|...+. ++.+.+|+.++|.|.+.+ +.|.+.|+|+|||..+.... ++.....++ +|.|.+++.+|+|.|+
T Consensus 3 v~~~P~~~~~p~-~~~v~~G~~v~l~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~ 78 (395)
T 1bih_A 3 VDKYPVLKDQPA-EVLFRENNPTVLECIIEG-NDQGVKYSWKKDGKSYNWQEHNAALRKDEG--SLVFLRPQASDEGHYQ 78 (395)
T ss_dssp --CCCEECCCCS-EEEEETTSCEEECCCEES-CCSSCEEEEEESSSBCCTTTTTEEECTTSC--CEEESSCCGGGCEEEE
T ss_pred cCCCCEeecCCC-ceEEeCCCEEEEEEEEec-CCCCceEEEEECCcCcccccceEEEecCCc--eEEEecCCCCCCcEEE
Confidence 456788776654 789999999999999993 37889999999999988765 333333333 7999999999999999
Q ss_pred EEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 141 CRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 141 C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
|.|.|..|.... ...|.|...+ .|.+ .+.. ..+.+|+
T Consensus 79 C~a~n~~g~~~s~~~~l~v~~~~---------------------------------------~p~~--~~~~-~~~~~G~ 116 (395)
T 1bih_A 79 CFAETPAGVASSRVISFRKTYLI---------------------------------------ASPA--KTHE-KTPIEGR 116 (395)
T ss_dssp EEEEETTEEEECCCEEEEEEEEE---------------------------------------CCCC--EEEE-ECCBTTE
T ss_pred EEEEeCCCeEEeEEEEEEEEEee---------------------------------------cCCc--CCcc-eeeeeCC
Confidence 999999887653 3455554321 1112 1112 2477999
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECC---EEccC----CCcEEEEEEcCeEEEEEcCCCCcccE---EEEEEEEcCCeeEEE
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNG---KPIEA----SHRIRTVHAFGMVVLEILGTKIEDTG---VYTCRATNKWGQAEI 289 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g---~~l~~----~~~~~~~~~~~~~~L~i~~~~~~d~G---~Y~C~~~n~~g~~~~ 289 (805)
.+.|.|.+. .+.|.+.+.|++++ .+... ..++... .+ ..|.|.+++.+|+| .|+|.+.|..+....
T Consensus 117 ~v~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~~--~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~ 192 (395)
T 1bih_A 117 PFQLDCVLP-NAYPKPLITWKKRLSGADPNADVTDFDRRITAG-PD--GNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEV 192 (395)
T ss_dssp EEEECCCCC-EEESCCEEEEEEEETTSCGGGCCCCCCTTEEEC-TT--SCEEEEEECGGGCCSSEEEEEEEECTTCSSCE
T ss_pred cEEEEecCC-CCCCCCeEEEEecCCCcCcccccccccccEEEc-CC--CcEEEEEEeeccCCCceEEEEEEEecccceEE
Confidence 999999852 46788999999986 22211 2333322 22 26999999999999 999999998887544
Q ss_pred EEEEEEecc---CC-----CCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEE--eC
Q psy2166 290 SVNLECVDK---SK-----GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS--DF 359 (805)
Q Consensus 290 ~~~l~v~~~---~~-----~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~--~~ 359 (805)
......... .. ..+|.+ .+.. ..+.+|+.+.|.|.+. +.|.+.+.|+++|..+.......+.. ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~~~~~G~~v~l~C~~~--g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~ 267 (395)
T 1bih_A 193 VLVEYEIKGVTKDNSGYKGEPVPQY--VSKD-MMAKAGDVTMIYCMYG--SNPMGYPNYFKNGKDVNGNPEDRITRHNRT 267 (395)
T ss_dssp EEEEEEECCCBCCSSCCCCCCEEEE--ECCS-EEEETTSCEEEEEEEE--CSSCCCCEEEETTEECCCCTTSSEESCSSS
T ss_pred EeeeEEecccccccccccCCcCcee--cCCc-eEEECCCcEEEEEEec--cCCCCeEEEEECCEEcCCCCceeEEEEecC
Confidence 333222111 00 012222 2222 3388999999999997 88999999999999987543222211 11
Q ss_pred cEEEEEEcccCcCCceEEEEEEEeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCc
Q psy2166 360 GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPK 438 (805)
Q Consensus 360 ~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (805)
....|.|.++..+|+|.|+|.|.|..|.... .+.|.|..
T Consensus 268 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~---------------------------------------- 307 (395)
T 1bih_A 268 SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS---------------------------------------- 307 (395)
T ss_dssp TTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE----------------------------------------
T ss_pred CCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc----------------------------------------
Confidence 2236999999999999999999999998665 77887753
Q ss_pred eeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEE
Q psy2166 439 FITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEA 518 (805)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C 518 (805)
+|.+...+.....+.+|+.++|.|
T Consensus 308 --------------------------------------------------------~P~~~~~~~~~~~~~~g~~~~l~C 331 (395)
T 1bih_A 308 --------------------------------------------------------APKYEQKPEKVIVVKQGQDVTIPC 331 (395)
T ss_dssp --------------------------------------------------------EEEEEECCCSEEEECTTSCEEEEC
T ss_pred --------------------------------------------------------CCccccCCCcceEecCCCeEEEEE
Confidence 455555555434489999999999
Q ss_pred EEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 519 RLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 519 ~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
.+. |.|.|.++|+|+|..+..+ ++.+. ++ .|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 332 ~~~--g~p~p~v~W~~~g~~~~~~-~~~~~--~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 332 KVT--GLPAPNVVWSHNAKPLSGG-RATVT--DS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEE--EESCCCCEEEETTEECCSS-SEEEE--TT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEC--cccCCeeEEEECCEECCCC-ceEEE--CC--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999 6688899999999999765 55443 23 6999999999999999999999999999998887
No 32
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.1e-40 Score=360.64 Aligned_cols=377 Identities=20% Similarity=0.245 Sum_probs=271.6
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.||.|...+.+. .+.+|+.++|.|.+.. +.|.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 5 ~~P~~~~~p~~~-~v~~G~~v~l~C~~~~-~~p~~~v~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 5 KYPVLKDQPAEV-LFRENNPTVLECIIEG-NDQGVKYSWKKDGKSYNWQEHN-AALRKDEGSLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp CCCEECCCCSEE-EEETTSCEEECCCEES-CCSSCEEEEEESSSBCCTTTTT-EEECTTSCCEEESSCCGGGCEEEEEEE
T ss_pred CCCEeecCCCce-EEeCCCEEEEEEEEec-CCCCceEEEEECCcCcccccce-EEEecCCceEEEecCCCCCCcEEEEEE
Confidence 678888887765 4889999999999842 3888999999999988766531 122233457999999999999999999
Q ss_pred EcCCeeEE-EEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECC---EEccC----CCc
Q psy2166 281 TNKWGQAE-ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG---KPIFH----KNR 352 (805)
Q Consensus 281 ~n~~g~~~-~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g---~~l~~----~~~ 352 (805)
.|..|... ..+.+.+... ..|.+. +... .+.+|+.+.|.|.+.. +.|.+.+.|++++ .+... ..+
T Consensus 82 ~n~~g~~~s~~~~l~v~~~---~~p~~~--~~~~-~~~~G~~v~l~C~~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~ 154 (395)
T 1bih_A 82 ETPAGVASSRVISFRKTYL---IASPAK--THEK-TPIEGRPFQLDCVLPN-AYPKPLITWKKRLSGADPNADVTDFDRR 154 (395)
T ss_dssp EETTEEEECCCEEEEEEEE---ECCCCE--EEEE-CCBTTEEEEECCCCCE-EESCCEEEEEEEETTSCGGGCCCCCCTT
T ss_pred EeCCCeEEeEEEEEEEEEe---ecCCcC--Ccce-eeeeCCcEEEEecCCC-CCCCCeEEEEecCCCcCccccccccccc
Confidence 99888764 2344444332 122222 1222 3779999999999621 7888999999986 22211 233
Q ss_pred eEEEEeCcEEEEEEcccCcCCce---EEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccc
Q psy2166 353 VKMVSDFGFVVMDIAYVQSHDSG---EYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQ 429 (805)
Q Consensus 353 ~~~~~~~~~~~l~i~~v~~~d~G---~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 429 (805)
+....+ + .|.|.++..+|+| .|+|.|.|..|................
T Consensus 155 ~~~~~~-~--~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~--------------------------- 204 (395)
T 1bih_A 155 ITAGPD-G--NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTK--------------------------- 204 (395)
T ss_dssp EEECTT-S--CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBC---------------------------
T ss_pred EEEcCC-C--cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEeccccc---------------------------
Confidence 433322 2 5889999999999 999999999887544333221100000
Q ss_pred cCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCccccc
Q psy2166 430 AAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLK 509 (805)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 509 (805)
.........+|.+ . +....+.
T Consensus 205 --------------------------------------------------------~~~~~~~~~~p~~--~-~~~~~~~ 225 (395)
T 1bih_A 205 --------------------------------------------------------DNSGYKGEPVPQY--V-SKDMMAK 225 (395)
T ss_dssp --------------------------------------------------------CSSCCCCCCEEEE--E-CCSEEEE
T ss_pred --------------------------------------------------------ccccccCCcCcee--c-CCceEEE
Confidence 0000001223444 1 2233488
Q ss_pred CCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 510 EGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 510 ~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
+|+.++|.|.+. |.|.+.++|+|+|..+.......+ ...
T Consensus 226 ~G~~v~l~C~~~--g~p~~~i~W~~~g~~~~~~~~~~~---------~~~------------------------------ 264 (395)
T 1bih_A 226 AGDVTMIYCMYG--SNPMGYPNYFKNGKDVNGNPEDRI---------TRH------------------------------ 264 (395)
T ss_dssp TTSCEEEEEEEE--CSSCCCCEEEETTEECCCCTTSSE---------ESC------------------------------
T ss_pred CCCcEEEEEEec--cCCCCeEEEEECCEEcCCCCceeE---------EEE------------------------------
Confidence 999999999998 778889999999987754311100 000
Q ss_pred eeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEE-EEEEEEeeccccc
Q psy2166 590 SKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT-KASLKCVSKTNLI 668 (805)
Q Consensus 590 ~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~ 668 (805)
. .. ....|.|.++..+|+|.|+|.|.|..|.... .+.|.|..
T Consensus 265 ---~-------------------~~----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~----- 307 (395)
T 1bih_A 265 ---N-------------------RT----------SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS----- 307 (395)
T ss_dssp ---S-------------------SS----------TTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEE-----
T ss_pred ---e-------------------cC----------CCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEc-----
Confidence 0 00 0013889999999999999999999999766 88999984
Q ss_pred cccccccccCCCCCCCCCCCCCCCeeeecCCc-ccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeC
Q psy2166 669 LESQLPELRRQPAGVPDSEDGRPPQFTSEFQH-LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF 747 (805)
Q Consensus 669 ~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~-~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~ 747 (805)
+|.|...+.+ . .+.+|+.+.|.|.+. |.|.|.|+|+|+|..+..+ ++.+. +
T Consensus 308 ----------------------~P~~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~-~~~~~--~ 359 (395)
T 1bih_A 308 ----------------------APKYEQKPEKVI-VVKQGQDVTIPCKVT--GLPAPNVVWSHNAKPLSGG-RATVT--D 359 (395)
T ss_dssp ----------------------EEEEEECCCSEE-EECTTSCEEEECEEE--EESCCCCEEEETTEECCSS-SEEEE--T
T ss_pred ----------------------CCccccCCCcce-EecCCCeEEEEEEEC--cccCCeeEEEECCEECCCC-ceEEE--C
Confidence 5677776666 5 899999999999999 9999999999999998765 55543 3
Q ss_pred cEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEE
Q psy2166 748 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 784 (805)
Q Consensus 748 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 784 (805)
+ .|.|.++..+|+|.|+|.|.|.+|....++.|.|
T Consensus 360 ~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 360 S--GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp T--EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred C--EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 4 7999999999999999999999999999999988
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3.2e-36 Score=309.46 Aligned_cols=281 Identities=26% Similarity=0.439 Sum_probs=242.5
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+.+|.|...+. .+.+.+|+.++|.|.+. +.|.+.|+|+|+|..+..+.++.+...++..+|.|.+++.+|+|.|+|.
T Consensus 3 ~~pP~~~~~p~-~~~~~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 79 (284)
T 2rik_A 3 MAPPFFDLKPV-SVDLALGESGTFKCHVT--GTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCY 79 (284)
T ss_dssp CCCCEEEECCC-CEEEETTCCEEEEEEEE--SSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCEEEcccc-ceEecCCCcEEEEEEEE--cCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEE
Confidence 46777776655 78899999999999998 6788899999999999988888888777778999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
|.|..|.......|.|..+ |.+...+.....+.+|+.+.
T Consensus 80 ~~n~~g~~~~~~~l~V~~~-----------------------------------------p~~~~~~~~~~~v~~g~~~~ 118 (284)
T 2rik_A 80 ASNVAGKDSCSAQLGVQEP-----------------------------------------PRFIKKLEPSRIVKQDEHTR 118 (284)
T ss_dssp EEETTEEEEEEEEEEEECC-----------------------------------------CEEEECCCSEEEEETTCCEE
T ss_pred EEECCceEEEEEEEEccCC-----------------------------------------CcccccCCCceEecCCceEE
Confidence 9999998888888888653 33333333333478999999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCC
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQ 302 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~ 302 (805)
|.|.+ .+.|.+.+.|+++|..+....++......+...|.|.+++.+|+|.|+|.+.|..|.....+.|.|. .
T Consensus 119 l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-----~ 191 (284)
T 2rik_A 119 YECKI--GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK-----E 191 (284)
T ss_dssp EEEEE--ESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE-----C
T ss_pred EEEEE--eeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEe-----c
Confidence 99998 5788999999999999988887777777778899999999999999999999999998888888887 4
Q ss_pred CCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEE
Q psy2166 303 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 382 (805)
Q Consensus 303 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 382 (805)
+|.+...+.... +.+|+.++|.|.+. +.|.+.+.|+++|..+....++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 192 ~p~~~~~~~~~~-~~~g~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 268 (284)
T 2rik_A 192 PPVFRKKPHPVE-TLKGADVHLECELQ--GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKAS 268 (284)
T ss_dssp CCBCCSCCCCEE-ECTTCCEEEEEECB--SSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcceeCCCcce-ecCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEE
Confidence 566655554443 78999999999997 889999999999999998888888888777889999999999999999999
Q ss_pred eCceeeEEEEEEEEE
Q psy2166 383 NKYGEDFTRATIKCF 397 (805)
Q Consensus 383 n~~g~~~~~~~l~V~ 397 (805)
|..|.....+.|.|.
T Consensus 269 N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 269 NDVGSYTCVGSITLK 283 (284)
T ss_dssp ETTEEEEEEEEEEEC
T ss_pred eCCCceeEEEEEEEc
Confidence 999999999988874
No 34
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=4.6e-36 Score=308.26 Aligned_cols=280 Identities=24% Similarity=0.469 Sum_probs=242.6
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.||.|...+.+. .+.+|+.++|.|.+ .+.|.+.+.|+|+|..+....++......+...|.|.+++.+|+|.|+|.+
T Consensus 4 ~pP~~~~~p~~~-~~~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 4 APPFFDLKPVSV-DLALGESGTFKCHV--TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCEEEECCCCE-EEETTCCEEEEEEE--ESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEccccce-EecCCCcEEEEEEE--EcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 678888887765 48899999999998 577889999999999998888887776777789999999999999999999
Q ss_pred EcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCc
Q psy2166 281 TNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 360 (805)
Q Consensus 281 ~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~ 360 (805)
.|..|..+..+.|.|. .+|.+...+.....+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+.....
T Consensus 81 ~n~~g~~~~~~~l~V~-----~~p~~~~~~~~~~~v~~g~~~~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 153 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQ-----EPPRFIKKLEPSRIVKQDEHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVES 153 (284)
T ss_dssp EETTEEEEEEEEEEEE-----CCCEEEECCCSEEEEETTCCEEEEEEEE--SSSCCEEEEEETTEECCCSSSEEEEEETT
T ss_pred EECCceEEEEEEEEcc-----CCCcccccCCCceEecCCceEEEEEEEe--eeCCCEEEEEECCEECcCCCcEEEEEcCC
Confidence 9999998888888887 5667666555544588999999999998 78999999999999998887777776677
Q ss_pred EEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCcee
Q psy2166 361 FVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFI 440 (805)
Q Consensus 361 ~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (805)
...|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 154 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~------------------------------------------ 191 (284)
T 2rik_A 154 VAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE------------------------------------------ 191 (284)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC------------------------------------------
T ss_pred EEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec------------------------------------------
Confidence 78899999999999999999999999888888888753
Q ss_pred eeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEE
Q psy2166 441 TQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL 520 (805)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v 520 (805)
+|.+...+... .+.+|+.++|.|.+
T Consensus 192 ------------------------------------------------------~p~~~~~~~~~-~~~~g~~v~l~C~~ 216 (284)
T 2rik_A 192 ------------------------------------------------------PPVFRKKPHPV-ETLKGADVHLECEL 216 (284)
T ss_dssp ------------------------------------------------------CCBCCSCCCCE-EECTTCCEEEEEEC
T ss_pred ------------------------------------------------------CCcceeCCCcc-eecCCCeEEEEEEE
Confidence 33343333333 37899999999999
Q ss_pred eeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 521 TPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 521 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
. |.|.+.++|+++|..+..+.++.+..++....|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 217 ~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 217 Q--GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp B--SSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred E--ecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 8 778899999999999998888888888888899999999999999999999999999999999885
No 35
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=3.8e-38 Score=335.92 Aligned_cols=318 Identities=11% Similarity=0.151 Sum_probs=239.9
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecC--------------CCCceEEEe---cCcEEEEEEcccccCCCe
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLE--------------LGSRFKTTA---DFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~--------------~~~~~~~~~---~~~~~~L~I~~~~~~D~G 137 (805)
.+.+.+|+.++|.|.+. +.|.+.|.|+|++..+. ...|+.+.. +++..+|.|.+++.+|+|
T Consensus 3 ~v~~~~G~~v~L~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G 80 (363)
T 1wio_A 3 VVLGKKGDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD 80 (363)
T ss_dssp EEEEETTSCEEECCCCT--TCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCE
T ss_pred eEEEeCCCeEEEEEEec--CCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCE
Confidence 35788999999999988 68899999999986421 123554443 334557999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.|.|..+ ...|.|.... .+|. ..+.+
T Consensus 81 ~Y~C~~~n~~~----~~~l~V~~~~--------------------------------------~~~~--------~~v~~ 110 (363)
T 1wio_A 81 TYICEVEDQKE----EVQLLVFGLT--------------------------------------ANSD--------THLLQ 110 (363)
T ss_dssp EEEEEETTEEE----EEEEEEEEEE--------------------------------------ESSC--------SSEES
T ss_pred EEEEEEEECCC----cEEEEEEeCC--------------------------------------CCCc--------eEEec
Confidence 99999987633 4556554210 0010 13679
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEec
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 297 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 297 (805)
|+.++|.|.+ .+.|.+.+.|+++|..+. . ....|.|.+++.+|+|.|+|.|.|..+.....+.+.|..
T Consensus 111 G~~v~l~C~~--~~~p~~~v~W~~~~~~~~--------~--~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~ 178 (363)
T 1wio_A 111 GQSLTLTLES--PPGSSPSVQCRSPRGKNI--------Q--GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 178 (363)
T ss_dssp BSCEEEEEEC--CTTCCCCEEEECSSSCEE--------E--ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEEC
T ss_pred CCCEEEEEEc--CCCCCCeEEEEcCCCccc--------c--cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEec
Confidence 9999999988 678899999999976431 1 224799999999999999999999888777777777763
Q ss_pred cCCCCCCeEEecCCCcccccCCCeEEEEEEEeec--C-CCCcEEEEEECCEEccC--------CCceEEEE---------
Q psy2166 298 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPV--N-DPELKVEWFHNGKPIFH--------KNRVKMVS--------- 357 (805)
Q Consensus 298 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~--~-~p~~~v~W~~~g~~l~~--------~~~~~~~~--------- 357 (805)
. |... ....+.+|+.+.|.|.+.+. + .|.+.+.|+++|..+.. ..++.+..
T Consensus 179 ~-----p~~~----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (363)
T 1wio_A 179 F-----QKAS----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQM 249 (363)
T ss_dssp C-----SCSE----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBC
T ss_pred C-----CCCC----CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhc
Confidence 2 2211 22237789999999988621 1 77899999999988865 44444432
Q ss_pred -eCcEEEEEEcccCcCCceEEEEEEEeC--ceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCccc
Q psy2166 358 -DFGFVVMDIAYVQSHDSGEYVCRAWNK--YGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVA 434 (805)
Q Consensus 358 -~~~~~~l~i~~v~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (805)
..+...|.|.++..+|+|.|+|.|.|. .|.....+.|.|..
T Consensus 250 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~------------------------------------ 293 (363)
T 1wio_A 250 GKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR------------------------------------ 293 (363)
T ss_dssp CSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE------------------------------------
T ss_pred ccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE------------------------------------
Confidence 222447999999999999999999999 99888888887631
Q ss_pred CCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeE
Q psy2166 435 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA 514 (805)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v 514 (805)
..|+++
T Consensus 294 --------------------------------------------------------------------------v~g~~~ 299 (363)
T 1wio_A 294 --------------------------------------------------------------------------ATQLQK 299 (363)
T ss_dssp --------------------------------------------------------------------------ECCCSS
T ss_pred --------------------------------------------------------------------------ecCCCe
Confidence 128889
Q ss_pred EEEEEEeeCCCCCcE--EEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 515 HFEARLTPVTDPDLV--VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 515 ~L~C~v~~~g~p~~~--v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
+|.|.+. +.|.|. ++|+|+|+.+..+ ..|.|.++..+|+|.|+|.|.|. |....++.|.|.
T Consensus 300 ~l~C~~~--g~p~p~~~i~W~~~~~~~~~~-----------~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 300 NLTCEVW--GPTSPKLMLSLKLENKEAKVS-----------KREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp SEEEEEE--SSCCTTCCEEEECSSSSCSEE-----------ESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEEC
T ss_pred eEEEEEc--cccCCCccEEEEeCCCceeee-----------eeeeeeeeccccceeEEEEEecC-CeEEEecceEec
Confidence 9999999 566666 9999999877532 13778889999999999999965 777777777764
No 36
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=4.7e-37 Score=336.93 Aligned_cols=369 Identities=13% Similarity=0.104 Sum_probs=252.4
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCC----ceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEccccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPN----LKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~----~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~ 133 (805)
.+..+.+.+|+.++|.|.+. +.+. +.|.|+|++ ..+ ....|+.+..+++..+|.|.+++.
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (438)
T 1qgc_4 7 SPASLAVSLGQRATISCRAS--ESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEA 84 (438)
T ss_dssp ECSEEEECTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCG
T ss_pred cCCeEEeeCCCCEEEEEecC--CCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcC
Confidence 34478899999999999987 4554 489999963 322 124588887777788999999999
Q ss_pred CCCeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccc
Q psy2166 134 RDQGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHL 212 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 212 (805)
+|+|.|+|.|.|..+.. .....|.|.... .+|.+.......
T Consensus 85 ~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~--------------------------------------~~P~v~~~~~~~ 126 (438)
T 1qgc_4 85 DDVATYYCQQSNEVPLTFGAGTKLDLKRAD--------------------------------------AAPTVSIFPPSS 126 (438)
T ss_dssp GGCEEEEEEECSSTTCCBCCCEEEEECCCC--------------------------------------BCCEEEEECCCH
T ss_pred cCCeeEEEEEecCCCccccCceeEEecCCC--------------------------------------CCCEEEecCCCh
Confidence 99999999999986533 234556663211 245555433322
Q ss_pred cccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEE-EE--EcC----eEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 213 SNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRT-VH--AFG----MVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 213 ~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~-~~--~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
. ..+|+.++|.|.+.. +.|.+ +|.|+|+|..+........ .. .++ ...|.|.+++.+|+|.|+|.|.|..
T Consensus 127 ~-~~~g~~~~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 204 (438)
T 1qgc_4 127 E-QLTSGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 204 (438)
T ss_dssp H-HHHTTEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETT
T ss_pred h-hccCCceEEEEEEcc-ccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecc
Confidence 2 346889999999842 35665 9999999998876521111 10 111 3579999999999999999999988
Q ss_pred eeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC--CcEEEEEEC--CEEcc------------
Q psy2166 285 GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP--ELKVEWFHN--GKPIF------------ 348 (805)
Q Consensus 285 g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p--~~~v~W~~~--g~~l~------------ 348 (805)
+.......+... .++.....+... .+.+|+.++|.|.+. +.| .+.+.|+|+ ++.+.
T Consensus 205 ~~~~~~~~~~~~-----~~~~~~~~~~~~-~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~ 276 (438)
T 1qgc_4 205 STSPIVKSFNRN-----ECEVMLVESGGG-LVKPGGSLKLSCTAS--GFIFNRCAMSWVRQTPEKRLEWVATISSGGTYT 276 (438)
T ss_dssp CSSCEEEEEETT-----C-CCEEEEECCE-EECTTCCEEEEEEEE--SSCGGGSCEEEEEEETTTEEEEEEEECTTSCCE
T ss_pred cCCceecccccc-----cceeEEecCCce-EEecCCcEEEEEEEc--ccccCCcEEEEEECCCCCCcEEEEEEeecCCce
Confidence 775433333321 122222223333 388999999999998 666 679999996 54331
Q ss_pred -----CCCceEEEEe--CcEEEEEEcccCcCCceEEEEEEEeCce-----eeEEEEEEEEEecccccccCCChhHHHHHH
Q psy2166 349 -----HKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCRAWNKYG-----EDFTRATIKCFGKGGVYLDSLQPESLARIR 416 (805)
Q Consensus 349 -----~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~ 416 (805)
...++.+..+ .....|.|.++..+|+|.|+|.|.|..+ .......+.|...
T Consensus 277 ~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~----------------- 339 (438)
T 1qgc_4 277 YYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAA----------------- 339 (438)
T ss_dssp ECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSS-----------------
T ss_pred ecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecC-----------------
Confidence 1346666554 3466899999999999999999998443 1112345554311
Q ss_pred HhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCC
Q psy2166 417 ELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAP 496 (805)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P 496 (805)
...+|
T Consensus 340 ---------------------------------------------------------------------------~~~~P 344 (438)
T 1qgc_4 340 ---------------------------------------------------------------------------KTTPP 344 (438)
T ss_dssp ---------------------------------------------------------------------------CCBCC
T ss_pred ---------------------------------------------------------------------------CCCCC
Confidence 12456
Q ss_pred ceEecCCCcccccCCCeEEEEEEEeeCCC-CCc-EEEEEECCEEccCCCceEEEeeCC---EEEEEEccCCCCCCEEEEE
Q psy2166 497 KFITQISDVTQLKEGQSAHFEARLTPVTD-PDL-VVEWFYNGKKLPHGHRYRTFHDFG---IVILDILYCYEENSGVYEC 571 (805)
Q Consensus 497 ~~~~~~~~~~~v~~G~~v~L~C~v~~~g~-p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C 571 (805)
.+....+... +.+|+.++|.|.+. |. |.+ .|+|+++|..+.......+..++. .+.|.|.++..+| |.|+|
T Consensus 345 ~v~~~~~~~~-~~~g~~v~L~C~~~--g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C 420 (438)
T 1qgc_4 345 SVYPLAPGSA-AAAASMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTC 420 (438)
T ss_dssp EEEEECCCGG-GCCSSEEEEEEEEE--SCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEE
T ss_pred eEEEcCcccc-cccCCcEEEEEEec--cccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEE
Confidence 5555444433 77899999999999 54 766 999999998875321111122222 2359999888889 99999
Q ss_pred EEEcCCcceEEEEEE
Q psy2166 572 RATNKYGSDVTKASL 586 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l 586 (805)
.|.|..|.......|
T Consensus 421 ~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 421 NVAHPASSTKVDKKI 435 (438)
T ss_dssp EEEEGGGTEEEEEEC
T ss_pred EEEeCCCCcceeeec
Confidence 999999987766554
No 37
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=2.7e-36 Score=330.82 Aligned_cols=370 Identities=13% Similarity=0.136 Sum_probs=245.8
Q ss_pred ccCCCceEEEEEEEeeCCCCC----eEEEEEECC--EEc------------cCCCcEEEEEEcCeEEEEEcCCCCcccEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQT----MTVEFLYNG--KPI------------EASHRIRTVHAFGMVVLEILGTKIEDTGV 275 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~----~~i~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 275 (805)
.+.+|+.++|.|.+ .+.+. +.+.|||++ ..+ ....++......+...|.|.+++.+|+|.
T Consensus 12 ~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (438)
T 1qgc_4 12 AVSLGQRATISCRA--SESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVAT 89 (438)
T ss_dssp EECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EeeCCCCEEEEEec--CCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCee
Confidence 47899999999997 66665 489999963 322 12346665556667899999999999999
Q ss_pred EEEEEEcCCeeE-EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccCCCce
Q psy2166 276 YTCRATNKWGQA-EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFHKNRV 353 (805)
Q Consensus 276 Y~C~~~n~~g~~-~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~ 353 (805)
|+|.|.|..+.. ...+.+.|... ..+|.+........ ..+|+.++|.|.+.+ +.|.+ .|.|+|+|..+......
T Consensus 90 Y~C~a~n~~~~~~~~~~~l~V~~~--~~~P~v~~~~~~~~-~~~g~~~~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~ 165 (438)
T 1qgc_4 90 YYCQQSNEVPLTFGAGTKLDLKRA--DAAPTVSIFPPSSE-QLTSGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLN 165 (438)
T ss_dssp EEEEECSSTTCCBCCCEEEEECCC--CBCCEEEEECCCHH-HHHTTEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEE
T ss_pred EEEEEecCCCccccCceeEEecCC--CCCCEEEecCCChh-hccCCceEEEEEEcc-ccCCCcEEEEEECCEEcCCCcee
Confidence 999999987532 33345555322 13666665444433 446889999999984 36766 99999999988654111
Q ss_pred --EEEE-eCc----EEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCC
Q psy2166 354 --KMVS-DFG----FVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQP 426 (805)
Q Consensus 354 --~~~~-~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 426 (805)
.... .++ ...|.|.++..+|+|.|+|.|.|..+.......+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~------------------------------ 215 (438)
T 1qgc_4 166 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR------------------------------ 215 (438)
T ss_dssp EEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEET------------------------------
T ss_pred ccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceeccccc------------------------------
Confidence 1100 011 246999999999999999999998876532222210
Q ss_pred ccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcc
Q psy2166 427 VAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVT 506 (805)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 506 (805)
..++.+...+...
T Consensus 216 ------------------------------------------------------------------~~~~~~~~~~~~~- 228 (438)
T 1qgc_4 216 ------------------------------------------------------------------NECEVMLVESGGG- 228 (438)
T ss_dssp ------------------------------------------------------------------TC-CCEEEEECCE-
T ss_pred ------------------------------------------------------------------ccceeEEecCCce-
Confidence 0111112222232
Q ss_pred cccCCCeEEEEEEEeeCCCC--CcEEEEEEC--CEEcc-----------------CCCceEEEee--CCEEEEEEccCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDP--DLVVEWFYN--GKKLP-----------------HGHRYRTFHD--FGIVILDILYCYE 563 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v~~ 563 (805)
.+.+|+.++|.|.+. |.| .+.++|+|+ |+.+. ...++.+..+ .+...|.|.+++.
T Consensus 229 ~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 306 (438)
T 1qgc_4 229 LVKPGGSLKLSCTAS--GFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRS 306 (438)
T ss_dssp EECTTCCEEEEEEEE--SSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEecCCcEEEEEEEc--ccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCCh
Confidence 388999999999999 555 679999996 54332 1346665543 3466799999999
Q ss_pred CCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEE
Q psy2166 564 ENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYE 643 (805)
Q Consensus 564 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 643 (805)
+|+|.|+|.|.|..|.... .. .
T Consensus 307 ~D~G~Y~C~a~n~~~~~~~---------~~--------------------~----------------------------- 328 (438)
T 1qgc_4 307 ADTAMYYCVRREDGGDEGF---------AY--------------------W----------------------------- 328 (438)
T ss_dssp GGCCEEEEEECCSSSCCCC---------CS--------------------B-----------------------------
T ss_pred hhCEEEEEEEEccCCCccc---------ee--------------------e-----------------------------
Confidence 9999999999885442000 00 0
Q ss_pred EEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC-C
Q psy2166 644 CRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-Q 722 (805)
Q Consensus 644 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p 722 (805)
| ....|.|...+ ..+|.+...+... .+.+|+.++|.|.+. |. |
T Consensus 329 -------~---~~~~l~V~~~~-----------------------~~~P~v~~~~~~~-~~~~g~~v~L~C~~~--g~~P 372 (438)
T 1qgc_4 329 -------G---QGTVVTVSAAK-----------------------TTPPSVYPLAPGS-AAAAASMVTLGCLVK--GYFP 372 (438)
T ss_dssp -------C---CCEEEEECSSC-----------------------CBCCEEEEECCCG-GGCCSSEEEEEEEEE--SCBS
T ss_pred -------C---CCEEEEEecCC-----------------------CCCCeEEEcCccc-ccccCCcEEEEEEec--cccC
Confidence 0 00111221100 0345554444444 678899999999999 87 8
Q ss_pred Ce-EEEEEECCEEccCCCCeEEEeeCc---EEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEE
Q psy2166 723 TM-TVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 783 (805)
Q Consensus 723 ~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 783 (805)
.| .|+|+|+|..+.......+..++. ...|.|.++..+| |.|+|.|.|.+|......+|.
T Consensus 373 ~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 373 EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp SCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred CCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 87 999999998876431111222221 1359999999889 999999999999887766554
No 38
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=2.3e-36 Score=322.12 Aligned_cols=334 Identities=14% Similarity=0.157 Sum_probs=226.9
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEcc--------------CCCcEEEEE---EcCeEEEEEcCCCCcccEEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE--------------ASHRIRTVH---AFGMVVLEILGTKIEDTGVY 276 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~--------------~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y 276 (805)
.+.+|+.++|.|.+ .+.|.+.+.|+|++..+. ...++.... ..+...|.|.+++.+|+|.|
T Consensus 5 ~~~~G~~v~L~C~~--~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 5 LGKKGDTVELTCTA--SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEETTSCEEECCCC--TTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred EEeCCCeEEEEEEe--cCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 47799999999987 688999999999985421 112222211 22456799999999999999
Q ss_pred EEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE
Q psy2166 277 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 356 (805)
Q Consensus 277 ~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~ 356 (805)
+|.+.|..+ .+.|.|.. +...+. ..+.+|+.++|.|.+. +.|.+.+.|+++|..+.
T Consensus 83 ~C~~~n~~~----~~~l~V~~--------~~~~~~--~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~-------- 138 (363)
T 1wio_A 83 ICEVEDQKE----EVQLLVFG--------LTANSD--THLLQGQSLTLTLESP--PGSSPSVQCRSPRGKNI-------- 138 (363)
T ss_dssp EEEETTEEE----EEEEEEEE--------EEESSC--SSEESBSCEEEEEECC--TTCCCCEEEECSSSCEE--------
T ss_pred EEEEEECCC----cEEEEEEe--------CCCCCc--eEEecCCCEEEEEEcC--CCCCCeEEEEcCCCccc--------
Confidence 999988743 45555542 112222 2378999999999997 78899999999875431
Q ss_pred EeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCC
Q psy2166 357 SDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEA 436 (805)
Q Consensus 357 ~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (805)
.... .|.|.++..+|+|.|+|.|.|..+.....+.+.|...
T Consensus 139 ~~~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~------------------------------------- 179 (363)
T 1wio_A 139 QGGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF------------------------------------- 179 (363)
T ss_dssp EESS--EEEECSBCGGGCEECEEEEEETTEEEEECCEECEECC-------------------------------------
T ss_pred ccce--EEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecC-------------------------------------
Confidence 1222 6999999999999999999998777666666665421
Q ss_pred CceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEE
Q psy2166 437 PKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHF 516 (805)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L 516 (805)
|... ....+.+|+.++|
T Consensus 180 -----------------------------------------------------------p~~~----~~~~~~~G~~v~l 196 (363)
T 1wio_A 180 -----------------------------------------------------------QKAS----SIVYKKEGEQVEF 196 (363)
T ss_dssp -----------------------------------------------------------SCSE----EEEEEETBCCEEE
T ss_pred -----------------------------------------------------------CCCC----CceEEecCCEEEE
Confidence 1111 2223789999999
Q ss_pred EEEEeeC--C-CCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 517 EARLTPV--T-DPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 517 ~C~v~~~--g-~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.|.+.+. + .|.|.++|+++|..+... .+.. .+. .+.|......... .+.......
T Consensus 197 ~C~~~~~~~~~~P~p~i~W~~~g~~~~~~-~~~~---------~~~------~~~~~~~~~~~~~------~~~~~~~~~ 254 (363)
T 1wio_A 197 SFPLAFTVEKLTGSGELWWQAERASSSKS-WITF---------DLK------NKEVSVKRVTQDP------KLQMGKKLP 254 (363)
T ss_dssp ECCCCCCCCSSCEEEEEEEEESSCCCCCC-EEEE---------EEC------SSCEEEEEEECSS------CCBCCSSSS
T ss_pred EEEEecccccCCCceeEEEecCCCCccce-EEEE---------Eec------CCeeeccccccch------hhhcccCCc
Confidence 9988731 1 688999999999887652 0000 000 0111111000000 000001010
Q ss_pred eeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeC--CcceEEEEEEEEeecccccccc
Q psy2166 594 LILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNK--YGSDVTKASLKCVSKTNLILES 671 (805)
Q Consensus 594 ~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~p~~~~~~ 671 (805)
. .|.|.++..+|+|.|+|.|.|. .|.....+.|.|..
T Consensus 255 ~---------------------------------~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-------- 293 (363)
T 1wio_A 255 L---------------------------------HLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR-------- 293 (363)
T ss_dssp C---------------------------------EEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE--------
T ss_pred e---------------------------------EEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE--------
Confidence 0 0566677777777777777777 77766677766652
Q ss_pred ccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeE--EEEEECCEEccCCCCeEEEeeCcE
Q psy2166 672 QLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMT--VEFLYNGKPIEASHRIRTVHAFGM 749 (805)
Q Consensus 672 ~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~--v~W~~~g~~l~~~~~~~~~~~~~~ 749 (805)
+ .|+.+.|.|.+. |.|+|. |+|+|+|+.+..+.
T Consensus 294 --------------------------------v-~g~~~~l~C~~~--g~p~p~~~i~W~~~~~~~~~~~---------- 328 (363)
T 1wio_A 294 --------------------------------A-TQLQKNLTCEVW--GPTSPKLMLSLKLENKEAKVSK---------- 328 (363)
T ss_dssp --------------------------------E-CCCSSSEEEEEE--SSCCTTCCEEEECSSSSCSEEE----------
T ss_pred --------------------------------e-cCCCeeEEEEEc--cccCCCccEEEEeCCCceeeee----------
Confidence 1 177899999999 888888 99999998776421
Q ss_pred EEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 750 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 750 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
.|.|.++..+|+|.|+|.|.|. |....++.|.|.
T Consensus 329 -~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 329 -REKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp -SSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEEC
T ss_pred -eeeeeeeccccceeEEEEEecC-CeEEEecceEec
Confidence 4778899999999999999964 677777777773
No 39
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=2.9e-34 Score=314.78 Aligned_cols=372 Identities=15% Similarity=0.122 Sum_probs=239.8
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecC-----------------CCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLE-----------------LGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~-----------------~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
+..+.+.+|+.++|.|.+.+...+.+.|.|+|+ +..+. ..+|+.+..+ ++..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 346789999999999999842113578999985 33210 2357777654 35679999999
Q ss_pred ccCCCeEEEEEEEeCCeeE---EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 132 YDRDQGIYTCRAWNLAGET---FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
+.+|+|.|+|.+.|..+.. .....|.|.... ..+|.+...
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~~ 129 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK-------------------------------------TTAPSVYPL 129 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC-------------------------------------CBCCEEEEE
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecCCC-------------------------------------CCCCceeEe
Confidence 9999999999999875431 223456664311 023443322
Q ss_pred cccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCC--CcEEEE-EEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 209 FQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEAS--HRIRTV-HAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 209 ~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~--~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
.+.. .+.+|+.++|.|.+.. ..|.+ .|.|++++..+... ...... .......|.|.++..+| |.|+|.|.|..
T Consensus 130 ~~~~-~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~ 206 (444)
T 1igt_B 130 APVC-GDTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPA 206 (444)
T ss_dssp CCCS-SCCCSSCEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETT
T ss_pred cccc-cCCCCCcEEEEEEEcc-eeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCC
Confidence 2222 2579999999999842 24665 99999998764211 110000 00012469999999999 99999999998
Q ss_pred eeEEEEEEEEEec-------------cCCCCCCeEEecCCCccc-ccCCCeEEEEEEEeecC--CCCcEEEEEECCEEcc
Q psy2166 285 GQAEISVNLECVD-------------KSKGQPPKFTSHIKSLEG-LKDGDSAHFECTLTPVN--DPELKVEWFHNGKPIF 348 (805)
Q Consensus 285 g~~~~~~~l~v~~-------------~~~~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~--~p~~~v~W~~~g~~l~ 348 (805)
+.......+.+.+ .....+|.+...+..... +.+|+.++|.|.+.+.. .+.+.|.|+|+|..+.
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~ 286 (444)
T 1igt_B 207 SSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVH 286 (444)
T ss_dssp TTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECS
T ss_pred CCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCcccc
Confidence 8765555443310 011124555333333332 57899999999998421 2357999999999886
Q ss_pred CCCce--EEEEeC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccC
Q psy2166 349 HKNRV--KMVSDF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQG 423 (805)
Q Consensus 349 ~~~~~--~~~~~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~ 423 (805)
..... ....++ ....|.|.++..+|+|.|+|.|.|..|.......+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~--------------------------- 339 (444)
T 1igt_B 287 TAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISK--------------------------- 339 (444)
T ss_dssp STTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEEC---------------------------
T ss_pred CcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEec---------------------------
Confidence 43221 111111 2346999999999999999999999886633333321
Q ss_pred CCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCC
Q psy2166 424 QQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQIS 503 (805)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 503 (805)
...+..+|.+....+
T Consensus 340 -----------------------------------------------------------------~~~~~~~P~v~~~~~ 354 (444)
T 1igt_B 340 -----------------------------------------------------------------PKGSVRAPQVYVLPP 354 (444)
T ss_dssp -----------------------------------------------------------------CCCCCBCCEEEEECC
T ss_pred -----------------------------------------------------------------cCCCCCCCEEEEeCC
Confidence 011246777776555
Q ss_pred CcccccCCCeEEEEEEEeeCCCCCc-EEEEEECCEEccCCCce--EEEeeCC---EEEEEEccCCCCCCEEEEEEEEcCC
Q psy2166 504 DVTQLKEGQSAHFEARLTPVTDPDL-VVEWFYNGKKLPHGHRY--RTFHDFG---IVILDILYCYEENSGVYECRATNKY 577 (805)
Q Consensus 504 ~~~~v~~G~~v~L~C~v~~~g~p~~-~v~W~~~g~~l~~~~~~--~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~ 577 (805)
....+..|+ ++|.|.+.+. .|.+ .|+|+|||..+...... ....++. .+.|.|.....+|+|.|+|.|.|..
T Consensus 355 ~~~~~~~~~-~~L~C~~~g~-~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 355 PEEEMTKKQ-VTLTCMVTDF-MPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp CGGGTTSSE-EEEEEEEEEE-BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred ChHHccCCe-EEEEEEEEee-eCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 443355555 9999999952 4544 99999999998432111 1112222 2357777766778999999999975
Q ss_pred c
Q psy2166 578 G 578 (805)
Q Consensus 578 g 578 (805)
-
T Consensus 433 l 433 (444)
T 1igt_B 433 L 433 (444)
T ss_dssp S
T ss_pred c
Confidence 3
No 40
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=300.05 Aligned_cols=279 Identities=16% Similarity=0.215 Sum_probs=218.0
Q ss_pred CCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 492 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 492 ~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
...+|.|..+.. ..+.+|+.++|.|.+.+ ..|.+.++|+|+|..+..+.++.+. .+...|.|.+++.+|+|.|+|
T Consensus 4 ~~~~P~~~~~~~--~~v~~G~~v~l~C~~~~-~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C 78 (317)
T 2y25_A 4 PFTGPHFVEYLS--WEVTGECNVLLKCKVAN-IKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEV 78 (317)
T ss_dssp SSSCCEEEEEEE--EEEETTTEEEEEEEEES-CCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEE
T ss_pred ccCCCcEeeeee--EEECCCCeEEEEEEEcC-CCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEE
Confidence 356788886553 45899999999999983 2378899999999999877766554 334679999999999999999
Q ss_pred EEEcCCcceEEEEEEEEeeeee---------------eeec---------------CCCCeEEEEECCEEccCCCceEEE
Q psy2166 572 RATNKYGSDVTKASLKCVSKTN---------------LILE---------------SQLPEVEWFYNGKKLPHGHRYRTF 621 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~---------------~~~~---------------~~~p~v~W~~~g~~l~~~~~~~~~ 621 (805)
.|.|..|.....+.|.|...+. +.+. .|.|.+.|+++|..+..+.++.+.
T Consensus 79 ~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~ 158 (317)
T 2y25_A 79 ILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTG 158 (317)
T ss_dssp EEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEE
T ss_pred EEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEe
Confidence 9999999887776665543221 1111 367899999999999888888888
Q ss_pred eeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccccccccc-ccccCCCCCCCCCCCCCCCeeeec-CC
Q psy2166 622 HDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQL-PELRRQPAGVPDSEDGRPPQFTSE-FQ 699 (805)
Q Consensus 622 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~P~~~~~-~~ 699 (805)
..++...|.|.++..+|+|.|+|.|.|..|.....+.|.|........+... +.. ......+|.+... +.
T Consensus 159 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~--------~~~~~~~p~~~~~~~~ 230 (317)
T 2y25_A 159 VTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQA--------AIAEKNRARVLGGLPD 230 (317)
T ss_dssp ECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHH--------HHHTTTSCEEEEBCCS
T ss_pred ccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCc--------ccCcCCCCcccccCCc
Confidence 8888889999999999999999999999999888888876532111111000 000 0000134555554 44
Q ss_pred cccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEee-CcEEEEEEcCCCCCCCEEEEEEEEcCCccEEE
Q psy2166 700 HLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA-FGMVVLEILGTKIEDTGVYTCRATNKWGQAEI 778 (805)
Q Consensus 700 ~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 778 (805)
.. .+.+|+.+.|.|.+. |+|.|.|+|+|+|+.+..+.++.+..+ ++...|.|.++..+|+|.|+|.|.|.+|..+.
T Consensus 231 ~~-~v~~g~~~~l~C~~~--g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 307 (317)
T 2y25_A 231 VV-TIQEGKALNLTCNVW--GDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 307 (317)
T ss_dssp EE-EEETTSBBCEEEEEE--CSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEE
T ss_pred cE-EEEcCCEEEEEEEEe--cCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEE
Confidence 45 899999999999999 999999999999999998888887666 66789999999999999999999999999999
Q ss_pred EEEEEEEE
Q psy2166 779 SVNLECVV 786 (805)
Q Consensus 779 ~~~l~V~~ 786 (805)
++.|.|.+
T Consensus 308 ~~~l~V~~ 315 (317)
T 2y25_A 308 DFTVSVFI 315 (317)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEc
Confidence 99999874
No 41
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=5.2e-34 Score=313.90 Aligned_cols=370 Identities=15% Similarity=0.162 Sum_probs=234.5
Q ss_pred CCCceecCCCcEEEEEEEecCCCC--CceEEEEEC--CEe---c--------------CCCCceEEEec--CcEEEEEEc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFN--GKP---L--------------ELGSRFKTTAD--FGFVTLDLT 129 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~--g~~---i--------------~~~~~~~~~~~--~~~~~L~I~ 129 (805)
++.+.+.+|+.++|.|.+. +.+ .+.|.|+|+ |.. + ....|+.+..+ ++..+|.|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQAS--GYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELR 84 (457)
T ss_dssp CCCEEECTTCCEEECEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred CCceEEcCCCCEEEEEEec--CccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEEC
Confidence 3467899999999999998 444 678999984 321 1 12357777654 467799999
Q ss_pred ccccCCCeEEEEEEEeCCe------------eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCC
Q psy2166 130 EVYDRDQGIYTCRAWNLAG------------ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDS 197 (805)
Q Consensus 130 ~~~~~D~G~Y~C~a~n~~g------------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (805)
+++.+|+|.|+|.+.|..| .....+.|.|....
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------- 129 (457)
T 1hzh_H 85 SLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS----------------------------------- 129 (457)
T ss_dssp SCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC-----------------------------------
T ss_pred CCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC-----------------------------------
Confidence 9999999999999998765 12234556664311
Q ss_pred CCCCCCceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcc
Q psy2166 198 EDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIED 272 (805)
Q Consensus 198 ~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d 272 (805)
..+|.+....+.. .+.+|+.++|.|.+. ...|. +.|.|+|+|..+...........++ .+.|.|.++..+|
T Consensus 130 --~~~P~i~~~~~~~-~~~~g~~v~L~C~~~-g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 205 (457)
T 1hzh_H 130 --TKGPSVFPLAPSS-KSTSGGTAALGCLVK-DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 205 (457)
T ss_dssp --CBCCEEEEECCCS-CCCTTCCEEEEEEEE-SBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT
T ss_pred --CCCCeEEecCccc-cccCCCcEEEEEEEe-EEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC
Confidence 1234444333222 367999999999985 23364 8999999997543211111111112 2479999999999
Q ss_pred cEEEEEEEEcCCeeEEEEEEEEEeccC------------CCCCCeEEecCCCcc-cccCCCeEEEEEEEeecCCCC----
Q psy2166 273 TGVYTCRATNKWGQAEISVNLECVDKS------------KGQPPKFTSHIKSLE-GLKDGDSAHFECTLTPVNDPE---- 335 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~~~~~~l~v~~~~------------~~~~p~~~~~~~~~~-~~~~g~~~~l~C~~~~~~~p~---- 335 (805)
|.|+|.|.|..+.......+.+.... ...+|.+...+.... .+.+|+.++|.|.+. +.+.
T Consensus 206 -G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~--g~~p~p~~ 282 (457)
T 1hzh_H 206 -QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVV--DVSHEDPE 282 (457)
T ss_dssp -SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEE--CCCTTCCC
T ss_pred -ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEE--cccCCCCc
Confidence 99999999987776555544432110 012455423232222 257899999999998 5543
Q ss_pred cEEEEEECCEEccCCCceEE-EEeCcEE----EEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChh
Q psy2166 336 LKVEWFHNGKPIFHKNRVKM-VSDFGFV----VMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPE 410 (805)
Q Consensus 336 ~~v~W~~~g~~l~~~~~~~~-~~~~~~~----~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~ 410 (805)
+.|.|+|++..+........ ...++.+ .|.|.....+|+|.|+|.|.|..+.......+.+
T Consensus 283 ~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~-------------- 348 (457)
T 1hzh_H 283 VKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK-------------- 348 (457)
T ss_dssp CEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECC--------------
T ss_pred eEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEc--------------
Confidence 39999999988754321111 1112211 1223333334499999999987654432222221
Q ss_pred HHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccC
Q psy2166 411 SLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAA 490 (805)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 490 (805)
..
T Consensus 349 ------------------------------------------------------------------------------~~ 350 (457)
T 1hzh_H 349 ------------------------------------------------------------------------------AK 350 (457)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 01
Q ss_pred CCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE--EeeCC---EEEEEEccCCCCC
Q psy2166 491 PVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT--FHDFG---IVILDILYCYEEN 565 (805)
Q Consensus 491 ~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~~~~---~~~L~i~~v~~~d 565 (805)
.+..+|.+....+....+..|+ ++|.|.+.+...|.+.|+|+|||.++........ ..++. .+.|.|.....+|
T Consensus 351 ~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~ 429 (457)
T 1hzh_H 351 GQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQ 429 (457)
T ss_dssp CCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHT
T ss_pred CCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccC
Confidence 1246777777655544456666 9999999964334469999999999864322111 12222 2346677666678
Q ss_pred CEEEEEEEEcCCcc
Q psy2166 566 SGVYECRATNKYGS 579 (805)
Q Consensus 566 ~G~Y~C~a~n~~g~ 579 (805)
+|.|+|.|.|....
T Consensus 430 ~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 430 GNVFSCSVMHEALH 443 (457)
T ss_dssp TCCEEEEEECTTSG
T ss_pred CCeEEEEEEECCCC
Confidence 99999999997654
No 42
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.4e-33 Score=286.48 Aligned_cols=285 Identities=23% Similarity=0.326 Sum_probs=209.1
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEE--ecCcEEEEEEccccc-CCCeE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTT--ADFGFVTLDLTEVYD-RDQGI 138 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~--~~~~~~~L~I~~~~~-~D~G~ 138 (805)
...+|.|...+. ++.+.+|+.++|.|.+. |.|.+.|+|+|+|..+..+ ++.+. .++....|.|.+++. +|+|.
T Consensus 3 ~~~~P~~~~~p~-~~~v~~G~~v~l~C~~~--g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~ 78 (304)
T 2yd9_A 3 GEEPPRFIKEPK-DQIGVSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENV 78 (304)
T ss_dssp -CCCCEEEECCC-CEEEETTSCEEEEEEEE--CSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSE
T ss_pred CccCCeeeecCC-ceEecCCCeEEEEEEEE--EeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeE
Confidence 345788877665 78899999999999998 6888899999999988644 55443 233457899999998 99999
Q ss_pred EEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC
Q psy2166 139 YTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 218 (805)
Q Consensus 139 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 218 (805)
|+|.|.|..|.......|.|..++.. | ...|.+...+... .+.+|
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~~~~~------p----------------------------~~~p~i~~~~~~~-~v~~g 123 (304)
T 2yd9_A 79 YECVAQNSVGEITVHAKLTVLREDQL------P----------------------------SGFPNIDMGPQLK-VVERT 123 (304)
T ss_dssp EEEEEECSSCEECCEEEEEEECGGGC------C----------------------------TTCCEEEECCCCE-EEETT
T ss_pred EEEEEECCCCeEEEEEEEEEeccccC------C----------------------------CCCCeeecCCccE-EEeCC
Confidence 99999999998888888888764321 0 0235565555443 47899
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCC---cEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEE-EEEE
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASH---RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS-VNLE 294 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~ 294 (805)
+.+.|.|.+ .+.|.+.+.|+++|..+.... ++. ......|.|.+++.+|+|.|+|.|.|..|..... ..+.
T Consensus 124 ~~v~l~C~~--~g~p~~~v~W~k~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~ 198 (304)
T 2yd9_A 124 RTATMLCAA--SGNPDPEITWFKDFLPVDPSASNGRIK---QLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLY 198 (304)
T ss_dssp SCEEECCEE--ECSSCCEEEEEETTEECCGGGGTTSEE---ECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred CeEEEEEEC--ccCCCCeEEEEECCEECcCCCCcceEE---eCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEE
Confidence 999999998 688889999999999887542 222 1122379999999999999999999998876533 4444
Q ss_pred EeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCc
Q psy2166 295 CVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDS 374 (805)
Q Consensus 295 v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~ 374 (805)
|.... .+|.+...+.... +.+|+.++|.|.+. +.|.+.|.|+++|..+.....+. .+...|.|.++ +|+
T Consensus 199 v~~~~--~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~ 267 (304)
T 2yd9_A 199 VRVQN--VAPRFSILPMSHE-IMPGGNVNITCVAV--GSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDS 267 (304)
T ss_dssp EECCC--EEEEEEECCCCBC-CCTTCCEEEEEEEE--EESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSC
T ss_pred EEeec--cCCcEEecCCceE-EcCCCeEEEEEEEe--eeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccC
Confidence 43211 4566666655543 88999999999998 78899999999999997654432 24456777765 699
Q ss_pred eEEEEEEEeCceeeEEEEEEEEEeccc
Q psy2166 375 GEYVCRAWNKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 375 G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 401 (805)
|.|+|.|.|..|.....+.|.|.+++.
T Consensus 268 G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 268 ANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp EEEEEEEEETTEEEEEEEEEC------
T ss_pred EEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 999999999999999999999876543
No 43
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=288.43 Aligned_cols=282 Identities=22% Similarity=0.356 Sum_probs=209.4
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-Ec-CeEEEEEcCCCC-cccEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-AF-GMVVLEILGTKI-EDTGVYT 277 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~-~~-~~~~L~i~~~~~-~d~G~Y~ 277 (805)
.||.|...+.+. .+.+|+.++|.|.+ .+.|.+.|.|+|+|..+... ++.... .+ ....|.|.+++. +|+|.|+
T Consensus 5 ~~P~~~~~p~~~-~v~~G~~v~l~C~~--~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 5 EPPRFIKEPKDQ-IGVSGGVASFVCQA--TGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCEEEECCCCE-EEETTSCEEEEEEE--ECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEE
T ss_pred cCCeeeecCCce-EecCCCeEEEEEEE--EEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEE
Confidence 678898888776 48899999999998 57888999999999988654 343332 22 247899999998 9999999
Q ss_pred EEEEcCCeeEEEEEEEEEeccCCC--CCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCC---c
Q psy2166 278 CRATNKWGQAEISVNLECVDKSKG--QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN---R 352 (805)
Q Consensus 278 C~~~n~~g~~~~~~~l~v~~~~~~--~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~---~ 352 (805)
|.+.|..|.....+.|.|...+.. ..|.+...+.... +.+|+.+.|.|.+. +.|.+.+.|++++..+.... +
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~-v~~g~~v~l~C~~~--g~p~~~v~W~k~~~~~~~~~~~~~ 157 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKV-VERTRTATMLCAAS--GNPDPEITWFKDFLPVDPSASNGR 157 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEE-EETTSCEEECCEEE--CSSCCEEEEEETTEECCGGGGTTS
T ss_pred EEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEE-EeCCCeEEEEEECc--cCCCCeEEEEECCEECcCCCCcce
Confidence 999999998888888888754321 2266666555444 88999999999997 88999999999999987532 3
Q ss_pred eEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEE-EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccC
Q psy2166 353 VKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTR-ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAA 431 (805)
Q Consensus 353 ~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 431 (805)
+.... .+ .|.|.++..+|+|.|+|.|.|..|..... +.+.|...
T Consensus 158 ~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~-------------------------------- 202 (304)
T 2yd9_A 158 IKQLR-SG--ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQ-------------------------------- 202 (304)
T ss_dssp EEECT-TS--CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC--------------------------------
T ss_pred EEeCC-Ce--EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEee--------------------------------
Confidence 32222 22 69999999999999999999999877654 55555311
Q ss_pred cccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCC
Q psy2166 432 PVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 511 (805)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 511 (805)
..+|.+...+... .+.+|
T Consensus 203 -------------------------------------------------------------~~~P~~~~~~~~~-~v~~G 220 (304)
T 2yd9_A 203 -------------------------------------------------------------NVAPRFSILPMSH-EIMPG 220 (304)
T ss_dssp -------------------------------------------------------------CEEEEEEECCCCB-CCCTT
T ss_pred -------------------------------------------------------------ccCCcEEecCCce-EEcCC
Confidence 2456666655553 38899
Q ss_pred CeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeee
Q psy2166 512 QSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSK 591 (805)
Q Consensus 512 ~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 591 (805)
+.++|.|.+. |.|.|.|+|+++|..+..+.++. .+...|.|.++ +|+|.|+|.|.|..|.....+.|.|...
T Consensus 221 ~~v~l~C~~~--g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 292 (304)
T 2yd9_A 221 GNVNITCVAV--GSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSL 292 (304)
T ss_dssp CCEEEEEEEE--EESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC----
T ss_pred CeEEEEEEEe--eeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecC
Confidence 9999999999 67888999999999997665432 34556888765 6999999999999999999999999887
Q ss_pred eee
Q psy2166 592 TNL 594 (805)
Q Consensus 592 ~~~ 594 (805)
+.+
T Consensus 293 ~~~ 295 (304)
T 2yd9_A 293 PKA 295 (304)
T ss_dssp ---
T ss_pred ccc
Confidence 653
No 44
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=293.71 Aligned_cols=288 Identities=18% Similarity=0.262 Sum_probs=221.6
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.+.+|.|..++ ++.+.+|+.++|.|.+.+ ..|.+.|.|+|+|..+..+.++.+.. +..+|.|.+++.+|+|.|+|
T Consensus 4 ~~~~P~~~~~~--~~~v~~G~~v~l~C~~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C 78 (317)
T 2y25_A 4 PFTGPHFVEYL--SWEVTGECNVLLKCKVAN-IKKETHIVWYKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEV 78 (317)
T ss_dssp SSSCCEEEEEE--EEEEETTTEEEEEEEEES-CCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEE
T ss_pred ccCCCcEeeee--eEEECCCCeEEEEEEEcC-CCCCCEEEEEECCeEcCCCCcEEEEC--CeEEEEEccCCcccCeEEEE
Confidence 45678888655 489999999999999983 23788999999999999877776653 34689999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 142 RAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
.+.|..|.......|.|...+. +...+... .+.+|+.+
T Consensus 79 ~~~n~~g~~~~~~~l~v~~~~~-----------------------------------------~~~~~~~~-~~~~g~~~ 116 (317)
T 2y25_A 79 ILKDDRGKDKSRLKLVDEAFKE-----------------------------------------LMMEVCKK-IALSATDL 116 (317)
T ss_dssp EEESSSCEEEEEECCSTHHHHH-----------------------------------------HHHHHHHH-HHTCBCCC
T ss_pred EEECCCCcEEEEEEEEEecCcc-----------------------------------------ccccCCce-ecccCCCe
Confidence 9999988776655554432211 11111111 24456666
Q ss_pred EEEEEEee-------C-CCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 222 HFEASLIP-------V-GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 222 ~l~C~~~~-------~-~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
.|.|.+.. . +.|.+.+.|+++|..+....++......+...|.|.+++.+|+|.|+|.|.|..|....++.+
T Consensus 117 ~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 196 (317)
T 2y25_A 117 KIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDL 196 (317)
T ss_dssp EEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEE
Confidence 66665411 1 268899999999999988888877777777889999999999999999999999988888877
Q ss_pred EEec---------------cCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe
Q psy2166 294 ECVD---------------KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 294 ~v~~---------------~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
.+.. .....+|.+.........+.+|+.+.|.|.+. +.|.+.+.|+++|..+....++.+...
T Consensus 197 ~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~--g~p~p~i~W~~~g~~~~~~~~~~~~~~ 274 (317)
T 2y25_A 197 SGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVW--GDPPPEVSWLKNEKALASDDHCNLKFE 274 (317)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEE--CSSCCEEEEEESSSEECCCSSEEECCB
T ss_pred eeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEe--cCCCCEEEEEECCEeCCCCCcEEEEEc
Confidence 6531 11113455555444444588999999999998 899999999999999988777777655
Q ss_pred -CcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEe
Q psy2166 359 -FGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFG 398 (805)
Q Consensus 359 -~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 398 (805)
+....|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 275 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 275 AGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp TTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 6667899999999999999999999999999999998864
No 45
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=281.67 Aligned_cols=258 Identities=23% Similarity=0.390 Sum_probs=201.6
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEE-CCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFY-NGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
.+|.+...+.+.. +.+|+.++|.|.+. +.|. .+.|++ +|..+..+.++.+..++....|.|.+++.+|+|.|+|.
T Consensus 3 ~~p~v~~~~~~~~-v~~G~~v~l~C~~~--~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 78 (291)
T 2wim_A 3 ALLQVTISLSKVE-LSVGESKFFTCTAI--GEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ 78 (291)
T ss_dssp CCCEEEESCSEEE-EETTCCEEEEEEEE--SCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCceEEEeccceE-ecCCCcEEEEEEEe--CCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEE
Confidence 5688888777665 99999999999999 6665 999999 88888888888888888888999999999999999999
Q ss_pred EEcCCcce-EEEEEEEEeeeeee---------------eec-----CCCCeEEEEECCEEccC--CCceEEEeeCCEEEE
Q psy2166 573 ATNKYGSD-VTKASLKCVSKTNL---------------ILE-----SQLPEVEWFYNGKKLPH--GHRYRTFHDFGIVIL 629 (805)
Q Consensus 573 a~n~~g~~-~~~~~l~V~~~~~~---------------~~~-----~~~p~v~W~~~g~~l~~--~~~~~~~~~~~~~~L 629 (805)
|.|..|.. ...+.|.|..++.+ .+. .|.|.+.|++++..+.. ..++.+..++ .|
T Consensus 79 ~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L 155 (291)
T 2wim_A 79 ATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NL 155 (291)
T ss_dssp EECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTS---CE
T ss_pred EecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCC---CE
Confidence 99998876 45667777655432 222 25679999999988864 4455544443 39
Q ss_pred EeccCCCCCcEEEEEEEEeCCcceE--EEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCC--cccccC
Q psy2166 630 DILYCYEENSGVYECRATNKYGSDV--TKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQ--HLSNLS 705 (805)
Q Consensus 630 ~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~v~ 705 (805)
.|.++..+|+|.|+|.|.|..+... ..+.|.|.. +|.+...+. .. .+.
T Consensus 156 ~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~---------------------------~p~~~~~~~~~~~-~~~ 207 (291)
T 2wim_A 156 QILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV---------------------------PPAISMPQKSFNA-TAE 207 (291)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEB---------------------------CCCCBCSCSEEEC-CSS
T ss_pred EEEecchhhCEEEEEEEEECCCCeeEEeeEEEEecc---------------------------CCccccCcccccc-eec
Confidence 9999999999999999999986544 345555653 444444333 34 789
Q ss_pred CCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 706 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 706 ~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
+|+.+.|.|.+. |.|.|.|+|+|+|..+..+.++.+....+ .|.|.++..+|+|.|+|.|.|.+|..+.++.|.|.
T Consensus 208 ~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 283 (291)
T 2wim_A 208 RGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 283 (291)
T ss_dssp SCCEEEEECBCC--CBSCCEEEEEETTEECCCTTTEEECSTTC--EEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-
T ss_pred CCCeEEEEEEee--cCCCCeEEEEECCEECcCCccEEEcCCcc--EEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEE
Confidence 999999999998 99999999999999999888876544444 79999999999999999999999999999999998
Q ss_pred EeCCC
Q psy2166 786 VWSPS 790 (805)
Q Consensus 786 ~~~~~ 790 (805)
.++|.
T Consensus 284 ~~~~~ 288 (291)
T 2wim_A 284 VQHHH 288 (291)
T ss_dssp -----
T ss_pred Eeccc
Confidence 87764
No 46
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=1.3e-32 Score=301.70 Aligned_cols=384 Identities=13% Similarity=0.130 Sum_probs=227.8
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc-----------------CCCcEEEEEE--cCeEEEEEcCCCCcc
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE-----------------ASHRIRTVHA--FGMVVLEILGTKIED 272 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d 272 (805)
.+.+|+.++|.|.+.....+.+.+.|||+ |..+. ...++..... .+...|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (444)
T 1igt_B 11 LVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSED 90 (444)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHHH
Confidence 47899999999998422113578999985 33210 1235554443 346789999999999
Q ss_pred cEEEEEEEEcCCee---EEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEcc
Q psy2166 273 TGVYTCRATNKWGQ---AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIF 348 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~---~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~ 348 (805)
+|.|+|.+.|..+. ....+.|.|..... .+|.+........ +.+|+.++|.|.+.+ ..|.+ .|.|++++..+.
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~-~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~ 167 (444)
T 1igt_B 91 TAMYYCARHGGYYAMDYWGQGTTVTVSSAKT-TAPSVYPLAPVCG-DTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSG 167 (444)
T ss_dssp CEEEEEEEECSSSCEEEEBCCEEEEECSCCC-BCCEEEEECCCSS-CCCSSCEEEEEEEEE-EBSSCCEEEEGGGTBCTT
T ss_pred CEEEEEEEecCCcccccccCcEEEEecCCCC-CCCceeEeccccc-CCCCCcEEEEEEEcc-eeCCCcEEEEecCCCCCC
Confidence 99999999987543 12334666653211 2444443333332 578999999999984 34665 999999987642
Q ss_pred CCCceEEEEeC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCC
Q psy2166 349 HKNRVKMVSDF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQ 425 (805)
Q Consensus 349 ~~~~~~~~~~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 425 (805)
..........+ ....|.|.++..+| |.|+|.|.|..|.......+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~--------------------------- 219 (444)
T 1igt_B 168 VHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRG--------------------------- 219 (444)
T ss_dssp EEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCC---------------------------
T ss_pred eEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCC---------------------------
Confidence 11000000111 12358899999889 999999999998765444332210
Q ss_pred CccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCc
Q psy2166 426 PVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDV 505 (805)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~ 505 (805)
...+.|... .........+|.+...++..
T Consensus 220 ----------------------------------------~~~~~~~~~-----------~~~~~~~~~~p~v~~~~p~~ 248 (444)
T 1igt_B 220 ----------------------------------------PTIKPCPPC-----------KCPAPNLLGGPSVFIFPPKI 248 (444)
T ss_dssp ----------------------------------------CSCCCCCCC-----------SCCCSCCCCCCEEEEECCCH
T ss_pred ----------------------------------------CCcccCCcc-----------ccCCcccCCCceEEecCCch
Confidence 011111100 00001123466664444443
Q ss_pred cc-ccCCCeEEEEEEEeeCC--CCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEE
Q psy2166 506 TQ-LKEGQSAHFEARLTPVT--DPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 582 (805)
Q Consensus 506 ~~-v~~G~~v~L~C~v~~~g--~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 582 (805)
.. +.+|++++|.|.+.+.+ .|.+.|+|+|+|..+.......... ...|.|.-.
T Consensus 249 ~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~--------------~~~~~~~~~---------- 304 (444)
T 1igt_B 249 KDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHRE--------------DYNSTLRVV---------- 304 (444)
T ss_dssp HHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEE--------------ECSSSEEEE----------
T ss_pred hheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCccccccee--------------CCCCcEEEE----------
Confidence 33 58999999999999532 2457999999999886432110000 001111100
Q ss_pred EEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEe
Q psy2166 583 KASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662 (805)
Q Consensus 583 ~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 662 (805)
. .|.|.++..+|+|.|+|.|.|..|.......+.+.
T Consensus 305 ---------~-----------------------------------~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~ 340 (444)
T 1igt_B 305 ---------S-----------------------------------ALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKP 340 (444)
T ss_dssp ---------E-----------------------------------EEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred ---------E-----------------------------------EEEEcHHHhccCCcEEEEEEcCCCCCceEEEEecc
Confidence 0 05556666666666666666666655322222210
Q ss_pred eccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecC-CCCe-EEEEEECCEEccCCCC
Q psy2166 663 SKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVG-DQTM-TVEFLYNGKPIEASHR 740 (805)
Q Consensus 663 ~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p~~-~v~W~~~g~~l~~~~~ 740 (805)
. ....+|.+...+.....+..| .++|.|.+. | +|.+ .|+|+|||..+.....
T Consensus 341 ~-----------------------~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~--g~~P~~~~v~W~k~g~~l~~~~~ 394 (444)
T 1igt_B 341 K-----------------------GSVRAPQVYVLPPPEEEMTKK-QVTLTCMVT--DFMPEDIYVEWTNNGKTELNYKN 394 (444)
T ss_dssp C-----------------------CCCBCCEEEEECCCGGGTTSS-EEEEEEEEE--EEBSSCCEEEEEETTEECSSEEE
T ss_pred C-----------------------CCCCCCEEEEeCCChHHccCC-eEEEEEEEE--eeeCCCCEEEEEECCEEcccccc
Confidence 0 001466666544433134445 599999998 6 5655 9999999998854221
Q ss_pred eEE-EeeCc----EEEEEEcCCCCCCCEEEEEEEEcCC
Q psy2166 741 IRT-VHAFG----MVVLEILGTKIEDTGVYTCRATNKW 773 (805)
Q Consensus 741 ~~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~ 773 (805)
... ...++ ...|.|.....+|+|.|+|.|.|..
T Consensus 395 ~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 395 TEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp CCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTT
T ss_pred ccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCC
Confidence 111 12233 2357777777788999999999975
No 47
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=100.00 E-value=1.7e-31 Score=295.23 Aligned_cols=370 Identities=14% Similarity=0.130 Sum_probs=234.8
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-----------------CCCCceEEEec--CcEEEEEEcc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-----------------ELGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-----------------~~~~~~~~~~~--~~~~~L~I~~ 130 (805)
.+..+.+.+|+.++|.|.+.+...+.+.|.|+|+ |..+ ...+|+.+..+ ++..+|.|.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (475)
T 1iga_A 7 QSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSS 86 (475)
T ss_pred cCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECC
Confidence 3446789999999999999842123678999995 3211 01357776654 3567899999
Q ss_pred cccCCCeEEEEEEEeCCee------EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCc
Q psy2166 131 VYDRDQGIYTCRAWNLAGE------TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQ 204 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g~------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 204 (805)
++.+|+|.|+|.+.+..|. ....+.|.|.... ..+|.
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~ 129 (475)
T 1iga_A 87 LRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS-------------------------------------PTSPK 129 (475)
T ss_pred CChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC-------------------------------------CcCCe
Confidence 9999999999999987652 2234456664311 02344
Q ss_pred eecccccccccCCCceEEEEEEEeeCCC-CC--eEEEEEECCEEccCCCcEEEE-EEcC----eEEEEEcCCCCcccEEE
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIPVGD-QT--MTVEFLYNGKPIEASHRIRTV-HAFG----MVVLEILGTKIEDTGVY 276 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~-p~--~~i~W~k~g~~l~~~~~~~~~-~~~~----~~~L~i~~~~~~d~G~Y 276 (805)
+...... .+.+|+.++|.|.+. +. |. +.|.|++++............ ..++ ...|.|..+..+|+|.|
T Consensus 130 i~~~~~~--~~~~g~~v~L~C~~~--g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y 205 (475)
T 1iga_A 130 VFPLSLC--STQPDGNVVIACLVQ--GFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSV 205 (475)
T ss_pred EEecCcc--ccCCCCeEEEEEEEe--eecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceE
Confidence 3332221 236899999999984 43 55 499999988532211000000 1111 24688989999999999
Q ss_pred EEEEEcCCeeE-EEEEEEEEecc-------------CCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC---cEEE
Q psy2166 277 TCRATNKWGQA-EISVNLECVDK-------------SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE---LKVE 339 (805)
Q Consensus 277 ~C~~~n~~g~~-~~~~~l~v~~~-------------~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~---~~v~ 339 (805)
+|.|.|..+.. ...+.+.|... ....+|.+...+.....+.+|+.++|.|.+. +.++ +.|.
T Consensus 206 ~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~--g~~p~~~~~i~ 283 (475)
T 1iga_A 206 TCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLT--GLRDASGVTFT 283 (475)
T ss_pred EEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEE--cccCCCceEEE
Confidence 99999987632 23333222100 0002444433333222258999999999998 4433 6999
Q ss_pred EEECCEEccCCCc-eEEEE-eC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHH
Q psy2166 340 WFHNGKPIFHKNR-VKMVS-DF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLAR 414 (805)
Q Consensus 340 W~~~g~~l~~~~~-~~~~~-~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~ 414 (805)
| ++..+..... ..... ++ ....|.|.++..+|+|.|+|.|.|..|.......|.+.
T Consensus 284 W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~----------------- 344 (475)
T 1iga_A 284 W--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKS----------------- 344 (475)
T ss_pred E--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecC-----------------
Confidence 9 4444332111 10000 11 23369999999999999999999998875444444221
Q ss_pred HHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCC
Q psy2166 415 IRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAE 494 (805)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 494 (805)
.+..
T Consensus 345 ----------------------------------------------------------------------------~~~~ 348 (475)
T 1iga_A 345 ----------------------------------------------------------------------------GNTF 348 (475)
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 1145
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCce----EEE---eeCC---EEEEEEccCCCC
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRY----RTF---HDFG---IVILDILYCYEE 564 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~----~~~---~~~~---~~~L~i~~v~~~ 564 (805)
+|.+....+....+.+|+.++|.|.+.++.++.+.|+|+|||+.|..+... ... .++. .+.|.|.....+
T Consensus 349 ~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~ 428 (475)
T 1iga_A 349 RPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWK 428 (475)
T ss_pred CCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhc
Confidence 677766555443478999999999999532345699999999999765311 111 1222 245888887778
Q ss_pred CCEEEEEEEEcCCcc
Q psy2166 565 NSGVYECRATNKYGS 579 (805)
Q Consensus 565 d~G~Y~C~a~n~~g~ 579 (805)
|.|.|+|.|.|....
T Consensus 429 ~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 429 KGDTFSCMVGHEALP 443 (475)
T ss_pred CCCEEEEEEEcCCCC
Confidence 999999999997643
No 48
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-31 Score=276.12 Aligned_cols=277 Identities=23% Similarity=0.368 Sum_probs=209.8
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEE-CCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF-NGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k-~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
.+|.+...+. ++.+.+|+.++|.|.+. +.|. .|.|+| +|..+..+.++.+..++...+|.|.+++.+|+|.|+|.
T Consensus 3 ~~p~v~~~~~-~~~v~~G~~v~l~C~~~--~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 78 (291)
T 2wim_A 3 ALLQVTISLS-KVELSVGESKFFTCTAI--GEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ 78 (291)
T ss_dssp CCCEEEESCS-EEEEETTCCEEEEEEEE--SCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCceEEEecc-ceEecCCCcEEEEEEEe--CCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEE
Confidence 4677777665 68999999999999998 4554 899999 78888888899888888888999999999999999999
Q ss_pred EEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 143 AWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 143 a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
+.|..|... ....|.|..++ .+...+... .+.+|+.+
T Consensus 79 ~~n~~g~~~~~~~~l~v~~~~-----------------------------------------~~~~~~~~~-~v~~G~~v 116 (291)
T 2wim_A 79 ATDAKGQTQEATVVLEIYQKL-----------------------------------------TFREVVSPQ-EFKQGEDA 116 (291)
T ss_dssp EECSSSCEEEEEEEEEEECCC-----------------------------------------BCCSCCCSE-EEETTSCE
T ss_pred EecccCceEEEEEEEEecCCc-----------------------------------------ceEeCCCCh-hhcCCCCE
Confidence 999887653 45556664332 222222222 37799999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCC--CcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeE--EEEEEEEEec
Q psy2166 222 HFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA--EISVNLECVD 297 (805)
Q Consensus 222 ~l~C~~~~~~~p~~~i~W~k~g~~l~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~l~v~~ 297 (805)
.|.|.+ .+.|.+.+.|++++..+... .++... .+ ..|.|.+++.+|+|.|+|.+.|..+.. ...+.+.+.
T Consensus 117 ~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~--~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~- 190 (291)
T 2wim_A 117 EVVCRV--SSSPAPAVSWLYHNEEVTTISDNRFAML-AN--NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN- 190 (291)
T ss_dssp EECCCC--BCSSCCEEEEECC----CBCCCSSEEEC-TT--SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-
T ss_pred EEEEEE--ccCCCCEEEEEECCccccccCCceEEEc-cC--CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEec-
Confidence 999988 68888999999999887642 333322 12 369999999999999999999876443 344555555
Q ss_pred cCCCCCCeEEecCCC-cccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceE
Q psy2166 298 KSKGQPPKFTSHIKS-LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 298 ~~~~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 376 (805)
.+|.+...... ...+.+|+.+.|.|.+. +.|.+.+.|+++|..+....++.+...+ ..|.|.++..+|+|.
T Consensus 191 ----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~ 262 (291)
T 2wim_A 191 ----VPPAISMPQKSFNATAERGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGP 262 (291)
T ss_dssp ----BCCCCBCSCSEEECCSSSCCEEEEECBCC--CBSCCEEEEEETTEECCCTTTEEECSTT--CEEEEESCCSTTCEE
T ss_pred ----cCCccccCcccccceecCCCeEEEEEEee--cCCCCeEEEEECCEECcCCccEEEcCCc--cEEEEeeCCcccCEE
Confidence 34444433321 22378899999999997 8899999999999999877776554333 369999999999999
Q ss_pred EEEEEEeCceeeEEEEEEEEEecc
Q psy2166 377 YVCRAWNKYGEDFTRATIKCFGKG 400 (805)
Q Consensus 377 Y~C~a~n~~g~~~~~~~l~V~~~~ 400 (805)
|+|.|.|..|....++.|.|..++
T Consensus 263 Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 263 YVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEEECCCceeeeEEEEEEEec
Confidence 999999999999999999987654
No 49
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.6e-31 Score=275.35 Aligned_cols=275 Identities=22% Similarity=0.331 Sum_probs=209.4
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCCC-CeEEEEEE-CCEEccCC-CcEEEEE-EcCeEEEEEcCCCCcccEEEE
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQ-TMTVEFLY-NGKPIEAS-HRIRTVH-AFGMVVLEILGTKIEDTGVYT 277 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p-~~~i~W~k-~g~~l~~~-~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~ 277 (805)
|+.+...+.+. .+.+|+.++|.|.+ .+.| .+.+.|++ +|..+... .++.... ......|.|.+++.+|+|.|+
T Consensus 2 ~~~v~~~p~~~-~v~~G~~v~l~C~~--~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 78 (291)
T 1qz1_A 2 VLQVDIVPSQG-EISVGESKFFLCQV--AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYK 78 (291)
T ss_dssp CCCEEEESSSE-EEETTCCEEEEEEE--SSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CcceEecCCCc-eEeCCCeEEEEEEe--CCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEE
Confidence 46677776665 48899999999998 5655 68999999 88877643 4444433 345689999999999999999
Q ss_pred EEEEcCCee-EEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCC--ceE
Q psy2166 278 CRATNKWGQ-AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN--RVK 354 (805)
Q Consensus 278 C~~~n~~g~-~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~ 354 (805)
|.+.|..|. .+..+.|.|. .+|.+...+.... +.+|+.+.|.|.+. +.|.+.+.|++++..+.... ++.
T Consensus 79 C~~~n~~g~~~~~~~~l~v~-----~~~~~~~~~~~~~-~~~g~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~ 150 (291)
T 1qz1_A 79 CVVTAEDGTQSEATVNVKIF-----QKLMFKNAPTPQE-FKEGEDAVIVCDVV--SSLPPTIIWKHKGRDVILKKDVRFI 150 (291)
T ss_dssp EEEECTTSCEEEEEEEEEEE-----CCSEEEECCSSEE-EETTSCEEECCEEE--CSSCCEEEEEETTSCSSTTCCTTEE
T ss_pred EEEEcCCCCeeEEEEEEEee-----ccccccCCCCccc-ccCCCeEEEEEEec--cCCCCEEEEEECCEEcccCCCceEE
Confidence 999998853 4666777776 4666666665554 88999999999998 78889999999998876432 333
Q ss_pred EEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeE--EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCc
Q psy2166 355 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDF--TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAP 432 (805)
Q Consensus 355 ~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 432 (805)
...+ + .|.|.++..+|+|.|+|.|.|..+... ..+.+.|..
T Consensus 151 ~~~~-~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~---------------------------------- 193 (291)
T 1qz1_A 151 VLSN-N--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV---------------------------------- 193 (291)
T ss_dssp ECTT-S--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE----------------------------------
T ss_pred EccC-C--cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec----------------------------------
Confidence 2222 2 599999999999999999999765433 334454432
Q ss_pred ccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCC-CcccccCC
Q psy2166 433 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQIS-DVTQLKEG 511 (805)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~~~~v~~G 511 (805)
+|.+..... ....+.+|
T Consensus 194 --------------------------------------------------------------~p~~~~~~~~~~~~~~~g 211 (291)
T 1qz1_A 194 --------------------------------------------------------------PPTVQARQSIVNATANLG 211 (291)
T ss_dssp --------------------------------------------------------------EEEEEESCSEEEEETTSC
T ss_pred --------------------------------------------------------------CCcccccccccccccccC
Confidence 233333221 12247899
Q ss_pred CeEEEEEEEeeCCCCCcEEEEEECCEEccCCC----ceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEE
Q psy2166 512 QSAHFEARLTPVTDPDLVVEWFYNGKKLPHGH----RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 512 ~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 587 (805)
+.++|.|.+. |.|.|.+.|+++|..+..+. ++... .....|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 212 ~~v~l~C~~~--g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 287 (291)
T 1qz1_A 212 QSVTLVCDAD--GFPEPTMSWTKDGEPIENEEEDDEKHIFS--DDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLK 287 (291)
T ss_dssp CCEEEEEEEE--EESCCEEEEEETTEECCCC--CCSSEEEC--TTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ceEEEEEEEE--EeCCCcEEEEECCEECcCCCCCCcceEEc--CCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEE
Confidence 9999999999 67888999999999997654 44333 2334799999999999999999999999999999999
Q ss_pred Eee
Q psy2166 588 CVS 590 (805)
Q Consensus 588 V~~ 590 (805)
|..
T Consensus 288 V~~ 290 (291)
T 1qz1_A 288 VFA 290 (291)
T ss_dssp EEC
T ss_pred EEc
Confidence 875
No 50
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=4.7e-31 Score=271.87 Aligned_cols=277 Identities=22% Similarity=0.285 Sum_probs=206.0
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCC-CceEEEEE-CCEecCCC-CceEEEe-cCcEEEEEEcccccCCCeEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDP-NLKIEWIF-NGKPLELG-SRFKTTA-DFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~k-~g~~i~~~-~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
+|.+...+. +..+.+|+.++|.|.+. +.+ .+.|.|+| ||..+... .++.+.. ++...+|.|.+++.+|+|.|+
T Consensus 2 ~~~v~~~p~-~~~v~~G~~v~l~C~~~--~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 78 (291)
T 1qz1_A 2 VLQVDIVPS-QGEISVGESKFFLCQVA--GDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYK 78 (291)
T ss_dssp CCCEEEESS-SEEEETTCCEEEEEEES--SCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CcceEecCC-CceEeCCCeEEEEEEeC--CCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEE
Confidence 355555554 67899999999999998 454 68999999 88877643 4565543 446679999999999999999
Q ss_pred EEEEeCCee-EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 141 CRAWNLAGE-TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 141 C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
|.+.|..|. ......|.|..+ |.+...+... .+.+|+
T Consensus 79 C~~~n~~g~~~~~~~~l~v~~~-----------------------------------------~~~~~~~~~~-~~~~g~ 116 (291)
T 1qz1_A 79 CVVTAEDGTQSEATVNVKIFQK-----------------------------------------LMFKNAPTPQ-EFKEGE 116 (291)
T ss_dssp EEEECTTSCEEEEEEEEEEECC-----------------------------------------SEEEECCSSE-EEETTS
T ss_pred EEEEcCCCCeeEEEEEEEeecc-----------------------------------------ccccCCCCcc-cccCCC
Confidence 999998754 345566666532 3333333333 478999
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee--EEEEEEEEEec
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ--AEISVNLECVD 297 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~ 297 (805)
.+.|.|.+ .+.|.+.+.|+++|..+........... ....|.|.+++.+|+|.|+|.+.|..+. ....+.+.|.
T Consensus 117 ~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~- 192 (291)
T 1qz1_A 117 DAVIVCDV--VSSLPPTIIWKHKGRDVILKKDVRFIVL-SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVN- 192 (291)
T ss_dssp CEEECCEE--ECSSCCEEEEEETTSCSSTTCCTTEEEC-TTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEE-
T ss_pred eEEEEEEe--ccCCCCEEEEEECCEEcccCCCceEEEc-cCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEe-
Confidence 99999998 5778899999999988764322111111 1236999999999999999999986533 2345556555
Q ss_pred cCCCCCCeEEecCCC-cccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCC----ceEEEEeCcEEEEEEcccCcC
Q psy2166 298 KSKGQPPKFTSHIKS-LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN----RVKMVSDFGFVVMDIAYVQSH 372 (805)
Q Consensus 298 ~~~~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~----~~~~~~~~~~~~l~i~~v~~~ 372 (805)
.+|.+...... ...+.+|+.++|.|.+. +.|.+.+.|+++|..+.... ++.+. .....|.|.++..+
T Consensus 193 ----~~p~~~~~~~~~~~~~~~g~~v~l~C~~~--g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~ 264 (291)
T 1qz1_A 193 ----VPPTVQARQSIVNATANLGQSVTLVCDAD--GFPEPTMSWTKDGEPIENEEEDDEKHIFS--DDSSELTIRNVDKN 264 (291)
T ss_dssp ----EEEEEEESCSEEEEETTSCCCEEEEEEEE--EESCCEEEEEETTEECCCC--CCSSEEEC--TTSCEEEECSCCGG
T ss_pred ----cCCcccccccccccccccCceEEEEEEEE--EeCCCcEEEEECCEECcCCCCCCcceEEc--CCCcEEEEEecChh
Confidence 34555543322 22378899999999998 78889999999999987654 33332 22347999999999
Q ss_pred CceEEEEEEEeCceeeEEEEEEEEEe
Q psy2166 373 DSGEYVCRAWNKYGEDFTRATIKCFG 398 (805)
Q Consensus 373 d~G~Y~C~a~n~~g~~~~~~~l~V~~ 398 (805)
|+|.|+|.|.|..|.....+.|.|.+
T Consensus 265 d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 265 DEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 99999999999999999999998864
No 51
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=277.17 Aligned_cols=283 Identities=16% Similarity=0.209 Sum_probs=212.3
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTST 154 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 154 (805)
.+.|.+|+.++|.|.+. .+.|.+.|+|+|||..+..+.++.+..+++..+|.|.+++.+|+|.|+|.|.|..|... +.
T Consensus 10 ~~~v~eg~~v~l~~~~~-~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~ 87 (312)
T 2y23_A 10 VVNVDDDGVISLNFECD-KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SY 87 (312)
T ss_dssp EEEECTTCCEEEEEECS-SCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EE
T ss_pred eEEEecCCeEEEEEEEe-CCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EE
Confidence 46788999999999997 46899999999999999999999999888888999999999999999999999887544 44
Q ss_pred EEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeC-CCC
Q psy2166 155 TIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPV-GDQ 233 (805)
Q Consensus 155 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-~~p 233 (805)
.+.|..... +..+... ..+|.+...+.....+.+|+.+.|.|.+ . +.|
T Consensus 88 ~l~v~~~~~----------------~~~~~~~-------------~~~p~~~~~~~~~~~v~~G~~v~l~C~~--~~~~p 136 (312)
T 2y23_A 88 LIDEEELKR----------------LLALSHE-------------HKFPTVPVKSELAVEILEKGQVRFWMQA--EKLSG 136 (312)
T ss_dssp EECHHHHHH----------------HHHHHHH-------------HHSCBCCEEEEEEEEECSSSCEEEEEEE--SCCCS
T ss_pred EEEEeeeee----------------eeccccc-------------CCCCccccccCCceEEeeCCCEEEEEEE--EeCCC
Confidence 454432110 0000000 0134333333323358899999999998 5 788
Q ss_pred CeEEEEEECCEEccCCCcEEEEEE--cCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEec--------------
Q psy2166 234 TMTVEFLYNGKPIEASHRIRTVHA--FGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD-------------- 297 (805)
Q Consensus 234 ~~~i~W~k~g~~l~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~-------------- 297 (805)
.+.+.|+++|..+....++.+... .+...|.|.+++.+|+|.|+|.+.+..........+....
T Consensus 137 ~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
T 2y23_A 137 NAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQE 216 (312)
T ss_dssp SCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccc
Confidence 999999999999988877766554 4567899999999999999999987655544444331000
Q ss_pred cCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceE
Q psy2166 298 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 298 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 376 (805)
.....+|.+..... ..+.+|+.+.|.|.+. +.|.+ .+.|+++|..+....++.+. .+...|.|.++..+|+|.
T Consensus 217 ~~~~~~p~~~~~~~--~~v~~G~~~~l~C~~~--~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~ 290 (312)
T 2y23_A 217 WIRKQGPHFVEYLS--WEVTGECNVLLKCKVA--NIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGI 290 (312)
T ss_dssp HHHHHSSEEEEEEE--EEEETTTEEEEEEEEE--SCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEE
T ss_pred hhhccCCceeecce--EEEeCCCEEEEEEEEc--CCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEE
Confidence 00002355443332 2378999999999998 78877 99999999999866666554 345689999999999999
Q ss_pred EEEEEEeCceeeEEEEEEEE
Q psy2166 377 YVCRAWNKYGEDFTRATIKC 396 (805)
Q Consensus 377 Y~C~a~n~~g~~~~~~~l~V 396 (805)
|+|.|.|..|.....+.|.+
T Consensus 291 Y~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 291 YEVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EEEEEESTTCCEEEEEEECS
T ss_pred EEEEEEcCCCceeeeeEEEe
Confidence 99999999999999888765
No 52
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=278.19 Aligned_cols=290 Identities=16% Similarity=0.220 Sum_probs=211.8
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
.+.+|+.+.|.|.+. .+.|.+.+.|+|+|..+....++.+...++...|.|.+++.+|+|.|+|.+.|..|... +..+
T Consensus 12 ~v~eg~~v~l~~~~~-~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l 89 (312)
T 2y23_A 12 NVDDDGVISLNFECD-KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLI 89 (312)
T ss_dssp EECTTCCEEEEEECS-SCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEE
T ss_pred EEecCCeEEEEEEEe-CCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEE
Confidence 478999999999986 67899999999999999988888888777788999999999999999999999887544 4555
Q ss_pred EEeccCC-------CCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe--CcEEEE
Q psy2166 294 ECVDKSK-------GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD--FGFVVM 364 (805)
Q Consensus 294 ~v~~~~~-------~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~~l 364 (805)
.|..... ..+|.+.........+.+|+.+.|.|.+.+ +.|.+.+.|++++..+....++.+..+ .+...|
T Consensus 90 ~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L 168 (312)
T 2y23_A 90 DEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEK-LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168 (312)
T ss_dssp CHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESC-CCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEE
T ss_pred EEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEe-CCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEE
Confidence 5432000 003333332221334889999999999962 678999999999999988777777654 566789
Q ss_pred EEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeec
Q psy2166 365 DIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQIS 444 (805)
Q Consensus 365 ~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (805)
.|.++..+|+|.|+|.|.+..+.. ...+.+.... +...+ ....+...
T Consensus 169 ~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~--~~~~~------~~~~~~~~----------------------- 215 (312)
T 2y23_A 169 FMEKLQDEDEGTYTFQLQDGKATN--HSTVVLVGDV--FKKLQ------KEAEFQRQ----------------------- 215 (312)
T ss_dssp EESCCCGGGCEEEEEEEESSSCEE--EEEEEECTHH--HHHHH------HHHHHHHH-----------------------
T ss_pred EEccCCcccCEeEEEEEEeCCceE--EEEEEEcchh--hhhhc------cccccccc-----------------------
Confidence 999999999999999998654433 3333332110 00000 00000000
Q ss_pred ceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCC
Q psy2166 445 DVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVT 524 (805)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g 524 (805)
......+|.|...+. ..+.+|+.++|.|.+. +
T Consensus 216 --------------------------------------------~~~~~~~p~~~~~~~--~~v~~G~~~~l~C~~~--~ 247 (312)
T 2y23_A 216 --------------------------------------------EWIRKQGPHFVEYLS--WEVTGECNVLLKCKVA--N 247 (312)
T ss_dssp --------------------------------------------HHHHHHSSEEEEEEE--EEEETTTEEEEEEEEE--S
T ss_pred --------------------------------------------chhhccCCceeecce--EEEeCCCEEEEEEEEc--C
Confidence 000123466654444 3488999999999999 6
Q ss_pred CCCc-EEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 525 DPDL-VVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 525 ~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
.|.+ .++|+|+|..+..+.++.+. ++...|.|.+++.+|+|.|+|.|.|..|....++.|+|.
T Consensus 248 ~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 248 IKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp CCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred CCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 6777 99999999999866666554 445689999999999999999999999999999988764
No 53
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=9.9e-35 Score=317.38 Aligned_cols=372 Identities=12% Similarity=0.088 Sum_probs=235.0
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec-----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL-----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i-----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
+..+.+.+|+.++|.|.+.+...+.+.|.|+|++ ..+ ...+|+.+..+ ++..+|.|.++
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 3467899999999999998421236789999963 221 01347776554 34568999999
Q ss_pred ccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccc
Q psy2166 132 YDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQH 211 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 211 (805)
+.+|+|.|+|.+.|..+.......|.|.... ..+|.+......
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~~~~~ 128 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSSAK-------------------------------------TTPPSVYPLAPG 128 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECCSC-------------------------------------CBCCCEEEECCC
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEccCC-------------------------------------CCCCeEEEcCCc
Confidence 9999999999998864433344566664311 023433322222
Q ss_pred ccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEc---CeEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 212 LSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAF---GMVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 212 ~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
. .+.+|+.++|.|.+.. ..|.+ .|.|+|+|..+...........+ ....|.|.+++.+| |.|+|.|.|..+..
T Consensus 129 ~-~~~~G~~v~L~C~~~g-~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~ 205 (434)
T 1igy_B 129 S-AAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASST 205 (434)
T ss_dssp C-CCCCTTEEEEEEEEEE-EBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTC
T ss_pred c-ccCCCCcEEEEEEEee-ecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCc
Confidence 2 2579999999999852 23665 99999998753210000000001 12469999999889 99999999998875
Q ss_pred EEEEEEEEecc-------CCCCCCeEEecCCCcc-cccCCCeEEEEEEEeecCCC----CcEEEEEECCEEccCCCceEE
Q psy2166 288 EISVNLECVDK-------SKGQPPKFTSHIKSLE-GLKDGDSAHFECTLTPVNDP----ELKVEWFHNGKPIFHKNRVKM 355 (805)
Q Consensus 288 ~~~~~l~v~~~-------~~~~~p~~~~~~~~~~-~~~~g~~~~l~C~~~~~~~p----~~~v~W~~~g~~l~~~~~~~~ 355 (805)
.....+.+... .....|.+...+.... .+.+|+.++|.|.+. +.+ .+.|.|+|++..+........
T Consensus 206 ~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~--g~~p~P~~~~i~W~k~~~~~~~~~~~~~ 283 (434)
T 1igy_B 206 KVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVV--DISKDDPEVQFSWFVDNVEVHTAQTQPR 283 (434)
T ss_dssp CEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEEC--CCCSSCCCCCBCBBSSSCCBCCCSCCCC
T ss_pred cceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEe--ccccCCCCeEEEEEeCCcccCCcccCcc
Confidence 44444432110 0001133333332222 278899999999998 442 468999999987653211110
Q ss_pred --EEeC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCcccc
Q psy2166 356 --VSDF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQA 430 (805)
Q Consensus 356 --~~~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 430 (805)
..++ ....|.|.++..+|+|.|+|.|.|..|.......+.+
T Consensus 284 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~---------------------------------- 329 (434)
T 1igy_B 284 EEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISK---------------------------------- 329 (434)
T ss_dssp CCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCC----------------------------------
T ss_pred eeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEec----------------------------------
Confidence 0111 1235889999999999999999998875422111110
Q ss_pred CcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccC
Q psy2166 431 APVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKE 510 (805)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 510 (805)
...+..+|.+...+.... ..+
T Consensus 330 ----------------------------------------------------------~~~~~~~P~v~~~~~~~~-~~~ 350 (434)
T 1igy_B 330 ----------------------------------------------------------TKGKPRAPQVYTIPPPKE-QMA 350 (434)
T ss_dssp ----------------------------------------------------------CCSCCBCCCCEEECCCSS-SSS
T ss_pred ----------------------------------------------------------cCCCCcCCEEEEECCCHH-Hhc
Confidence 112346777766554433 446
Q ss_pred CCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE--EeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 511 GQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT--FHDFG---IVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 511 G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
|+.++|.|.+.+..++.+.|+|+|||+++........ ..++. .+.|.|.....+|+|.|+|.|.|....
T Consensus 351 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 351 KDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 7789999999963233569999999998854321111 11222 235788877778899999999998654
No 54
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.98 E-value=2.4e-31 Score=292.72 Aligned_cols=381 Identities=14% Similarity=0.209 Sum_probs=227.7
Q ss_pred ccCCCceEEEEEEEeeCCCC--CeEEEEEEC--CEE---c--------------cCCCcEEEEEE--cCeEEEEEcCCCC
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ--TMTVEFLYN--GKP---I--------------EASHRIRTVHA--FGMVVLEILGTKI 270 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p--~~~i~W~k~--g~~---l--------------~~~~~~~~~~~--~~~~~L~i~~~~~ 270 (805)
.+.+|+.++|.|.+. +.+ .+.+.|||+ |.. + ....++..... .+...|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (457)
T 1hzh_H 11 VKKPGASVKVSCQAS--GYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRS 88 (457)
T ss_dssp EECTTCCEEECEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEec--CccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCc
Confidence 478999999999984 444 678999984 321 1 01245554443 3567899999999
Q ss_pred cccEEEEEEEEcCCe------------eEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC-cE
Q psy2166 271 EDTGVYTCRATNKWG------------QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-LK 337 (805)
Q Consensus 271 ~d~G~Y~C~~~n~~g------------~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~~ 337 (805)
+|+|.|+|.+.|..+ .....+.|.|..... .+|.+........ +.+|+.++|.|.+.+ ..|. +.
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~-~~~g~~v~L~C~~~g-~~P~~~~ 165 (457)
T 1hzh_H 89 ADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAST-KGPSVFPLAPSSK-STSGGTAALGCLVKD-YFPEPVT 165 (457)
T ss_dssp GGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCC-BCCEEEEECCCSC-CCTTCCEEEEEEEES-BBSCCCE
T ss_pred ccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCC-CCCeEEecCcccc-ccCCCcEEEEEEEeE-EeCCCeE
Confidence 999999999998764 122345566654211 2455544333333 678999999999983 3364 89
Q ss_pred EEEEECCEEccCCCceEEEEeCc----EEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHH
Q psy2166 338 VEWFHNGKPIFHKNRVKMVSDFG----FVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLA 413 (805)
Q Consensus 338 v~W~~~g~~l~~~~~~~~~~~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~ 413 (805)
|.|++++..+...........++ ...|.|.++..+| |.|+|.|.|..+.......+.+...+..
T Consensus 166 v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~----------- 233 (457)
T 1hzh_H 166 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKT----------- 233 (457)
T ss_dssp EEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSS-----------
T ss_pred EEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcc-----------
Confidence 99999997543111001111111 2368999999999 9999999998876554444433211100
Q ss_pred HHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCC
Q psy2166 414 RIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVA 493 (805)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 493 (805)
|.|.+ .....+.
T Consensus 234 -------------------------------------------------------~~~~~-------------~~~~~~~ 245 (457)
T 1hzh_H 234 -------------------------------------------------------HTCPP-------------CPAPELL 245 (457)
T ss_dssp -------------------------------------------------------CSCCS-------------CCCCCCS
T ss_pred -------------------------------------------------------cccCC-------------CCCcccc
Confidence 00000 0001123
Q ss_pred CCCceEecCCCcc-cccCCCeEEEEEEEeeCCCCC----cEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEE
Q psy2166 494 EAPKFITQISDVT-QLKEGQSAHFEARLTPVTDPD----LVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 568 (805)
Q Consensus 494 ~~P~~~~~~~~~~-~v~~G~~v~L~C~v~~~g~p~----~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 568 (805)
.+|.+....+... .+.+|++++|.|.+. |.|+ +.|+|+|+|..+....... .. ..+.|.
T Consensus 246 ~~p~v~~~~p~~~~~~~~G~~v~L~C~~~--g~~p~p~~~~i~W~k~~~~~~~~~~~~----------~~----~~~~g~ 309 (457)
T 1hzh_H 246 GGPSVFLFPPKPKDTLMISRTPEVTCVVV--DVSHEDPEVKFNWYVDGVEVHNAKTKP----------RE----EQYNST 309 (457)
T ss_dssp SSCEEEEECCCHHHHHCTTSCCCEEEEEE--CCCTTCCCCEEEEEETTEEECCCEEEE----------EE----ECTTSC
T ss_pred CCceEEeECcCchhhcccCCceEEEEEEE--cccCCCCceEEEEEeCCcccccccccc----------ce----ecCCCc
Confidence 4566533333332 267899999999999 4433 3999999999875431110 00 012232
Q ss_pred EEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEe
Q psy2166 569 YECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648 (805)
Q Consensus 569 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 648 (805)
|.... . |.|.....+|+|.|+|.|.|
T Consensus 310 ~~~~~-----------~-------------------------------------------l~i~~~d~~d~G~Y~C~a~n 335 (457)
T 1hzh_H 310 YRVVS-----------V-------------------------------------------LTVLHQDWLNGKEYKCKVSN 335 (457)
T ss_dssp EEEEE-----------E-------------------------------------------ECCCHHHHHHTCCEEEEEEC
T ss_pred EEEEE-----------E-------------------------------------------EEECHHHccCCCcEEEEEeC
Confidence 32211 0 22222233457777777777
Q ss_pred CCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCC--eEE
Q psy2166 649 KYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT--MTV 726 (805)
Q Consensus 649 ~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~--~~v 726 (805)
..+.......+.+.. ....+|.+...+.....+..|+ +.|.|.+. |.|+ +.|
T Consensus 336 ~~~~~~~~~~v~~~~-----------------------~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~--g~~p~~~~v 389 (457)
T 1hzh_H 336 KALPAPIEKTISKAK-----------------------GQPREPQVYTLPPSRDELTKNQ-VSLTCLVK--GFYPSDIAV 389 (457)
T ss_dssp TTSSSCEEEEECCCC-----------------------CCCBCCEEEEECCCGGGGGSSE-EEEEEEEE--EEBSSCCEE
T ss_pred CCCCCcceEEEEccc-----------------------CCCCCCeEEEECCCccccCCCc-EEEEEEEE--eEECCCCEE
Confidence 655443333332200 0014677666554431455555 99999998 6543 499
Q ss_pred EEEECCEEccCCCCeEE-EeeCc----EEEEEEcCCCCCCCEEEEEEEEcCCcc
Q psy2166 727 EFLYNGKPIEASHRIRT-VHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQ 775 (805)
Q Consensus 727 ~W~~~g~~l~~~~~~~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 775 (805)
+|+|||+.+........ ...++ ...|.|.....+|+|.|+|.|.|..-.
T Consensus 390 ~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 390 EWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp EEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 99999999864422111 12222 135777777678999999999998643
No 55
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=2.6e-29 Score=277.60 Aligned_cols=384 Identities=13% Similarity=0.128 Sum_probs=230.7
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc-----------------CCCcEEEEEE--cCeEEEEEcCCCCcc
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE-----------------ASHRIRTVHA--FGMVVLEILGTKIED 272 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d 272 (805)
.+.+|+.++|.|.+.....+.+.+.|||+ |..+. ...++..... .+...|.|.+++.+|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 91 (475)
T 1iga_A 12 VKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPED 91 (475)
T ss_pred EEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChhh
Confidence 47899999999998421123578999985 22110 1234443332 345789999999999
Q ss_pred cEEEEEEEEcCCee------EEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC-c-EEEEEECC
Q psy2166 273 TGVYTCRATNKWGQ------AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-L-KVEWFHNG 344 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~------~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~-~v~W~~~g 344 (805)
+|.|.|.+.+..+. ....+.|.|..... .+|.+....... +.+|+.++|.|.+.| ..|. + .|.|++++
T Consensus 92 ~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~--~~~g~~v~L~C~~~g-~~P~~p~~v~W~~~~ 167 (475)
T 1iga_A 92 TAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASP-TSPKVFPLSLCS--TQPDGNVVIACLVQG-FFPQEPLSVTWSESG 167 (475)
T ss_pred CEEEEEEEeccCCCccceeeecCceEEEeccCCC-cCCeEEecCccc--cCCCCeEEEEEEEee-ecCCCceEEEEcCCC
Confidence 99999999987651 22345666653211 244444333222 468999999999983 3355 4 99999988
Q ss_pred EEccCCCceEEE-EeCc----EEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhh
Q psy2166 345 KPIFHKNRVKMV-SDFG----FVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELE 419 (805)
Q Consensus 345 ~~l~~~~~~~~~-~~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~ 419 (805)
............ ..++ ...|.|..+..+|+|.|+|.|.|..+. .....+.+..+.. +
T Consensus 168 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~-~~~~~v~l~V~~~-------~---------- 229 (475)
T 1iga_A 168 QGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP-SQDVTVPCPVPST-------P---------- 229 (475)
T ss_pred cccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC-ceeeeEecccccC-------c----------
Confidence 543211000011 0111 125888888889999999999998863 2223332211000 0
Q ss_pred hccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceE
Q psy2166 420 NAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFI 499 (805)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 499 (805)
....+.|... .... ..+|.+.
T Consensus 230 ---------------------------------------------~~~~~~~~~~-------------~~~~-~~~p~v~ 250 (475)
T 1iga_A 230 ---------------------------------------------PTPSPSTPPT-------------PSPS-CCHPRLS 250 (475)
T ss_pred ---------------------------------------------cccccccccc-------------CCCC-CCCcEEE
Confidence 0000111000 0000 1345554
Q ss_pred ecCCCcccccCCCeEEEEEEEeeCCCC--CcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCC
Q psy2166 500 TQISDVTQLKEGQSAHFEARLTPVTDP--DLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 577 (805)
Q Consensus 500 ~~~~~~~~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 577 (805)
...+....+.+|+.++|.|.+.+. .| .+.|+| ++..+...... . ....+.|
T Consensus 251 ~~~p~~~~~~~G~~v~L~C~~~g~-~p~~~~~i~W--~~~~~~~~~~~-------------~-~~~~~~g---------- 303 (475)
T 1iga_A 251 LHRPALEDLLLGSEANLTCTLTGL-RDASGVTFTW--TPSSGKSAVQG-------------P-PERDLCG---------- 303 (475)
T ss_pred EcCCChHHhccCCceEEEEEEEcc-cCCCceEEEE--CCCCcCCcccc-------------C-ceECCCC----------
Confidence 433333336899999999999942 23 279999 44333211000 0 0000011
Q ss_pred cceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2166 578 GSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKA 657 (805)
Q Consensus 578 g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 657 (805)
.+. ....|.|.++..+|+|.|+|.|.|..|......
T Consensus 304 ---------------------------------------~~~-----~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~ 339 (475)
T 1iga_A 304 ---------------------------------------CYS-----VSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTA 339 (475)
T ss_pred ---------------------------------------CEE-----EEEEEEEchHHhccCCcEEEEEEcCCCCCceEE
Confidence 111 112388899999999999999999988765555
Q ss_pred EEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC-C-CeEEEEEECCEEc
Q psy2166 658 SLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-Q-TMTVEFLYNGKPI 735 (805)
Q Consensus 658 ~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p-~~~v~W~~~g~~l 735 (805)
.|.+.. ...+|.+...+.....+.+|+.+.|.|.+. |. | .+.|+|+|||+.+
T Consensus 340 ~v~~~~------------------------~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~--g~~P~~~~v~W~k~g~~l 393 (475)
T 1iga_A 340 TLSKSG------------------------NTFRPEVHLLPPPSEELALNELVTLTCLAR--GFSPKDVLVRWLQGSQEL 393 (475)
T ss_pred EeecCC------------------------CCCCCeEEEECCChHHhccCCceEEEEEEe--eeECCCCEEEEEECCEEC
Confidence 553311 015677766544431578999999999998 65 3 3599999999998
Q ss_pred cCCCCeE---EEe---eCc----EEEEEEcCCCCCCCEEEEEEEEcCCcc
Q psy2166 736 EASHRIR---TVH---AFG----MVVLEILGTKIEDTGVYTCRATNKWGQ 775 (805)
Q Consensus 736 ~~~~~~~---~~~---~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 775 (805)
..+.... ... .++ ...|.|.....+|+|.|+|.|.|....
T Consensus 394 ~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 394 PREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred CCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 7663111 111 222 246888888889999999999998754
No 56
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=8.9e-29 Score=274.82 Aligned_cols=377 Identities=14% Similarity=0.117 Sum_probs=231.0
Q ss_pred CCCceecCCCcEEEEEEEecCCCCC--ceEEEEEC--CEec---C-------------CCCceEEEec--CcEEEEEEcc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPN--LKIEWIFN--GKPL---E-------------LGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~--~~v~W~k~--g~~i---~-------------~~~~~~~~~~--~~~~~L~I~~ 130 (805)
+..+.+.+|+.++|.|.+.+..... ..|.|||. |..+ . ..+|+.+..+ ++.++|.|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 86 (512)
T 1zvo_C 7 SGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRS 86 (512)
T ss_pred CCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECc
Confidence 4478899999999999998321112 68999985 3211 0 1357777654 3467999999
Q ss_pred cccCCCeEEEEEEEeCCe-----------e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCC
Q psy2166 131 VYDRDQGIYTCRAWNLAG-----------E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDS 197 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (805)
++.+|+|.|+|.+.+..+ . ....+.|.|...+
T Consensus 87 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------- 131 (512)
T 1zvo_C 87 MSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAP----------------------------------- 131 (512)
T ss_pred CCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccC-----------------------------------
Confidence 999999999999987642 1 1123456664311
Q ss_pred CCCCCCceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcc
Q psy2166 198 EDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIED 272 (805)
Q Consensus 198 ~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d 272 (805)
..+|.+...........+|+.++|.|.+. ...|. +.|.|++++..............++ .+.|.|.....+
T Consensus 132 --~~~P~i~~~~~~~~~~~~~~~v~L~C~~~-g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~- 207 (512)
T 1zvo_C 132 --TKAPDVFPIISGCRHPKDNSPVVLACLIT-GYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR- 207 (512)
T ss_pred --CcCCeEEeccCCcccccCCCeEEEEEEEE-eeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-
Confidence 02344332111100012468999999985 23365 4999999764321000000111112 246889887777
Q ss_pred cEEEEEEEEcCCeeEEEEE-----------EEEEeccC------------------------------------------
Q psy2166 273 TGVYTCRATNKWGQAEISV-----------NLECVDKS------------------------------------------ 299 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~~~~~-----------~l~v~~~~------------------------------------------ 299 (805)
.|.|+|.|.|..+...... .+.+...+
T Consensus 208 ~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~ 287 (512)
T 1zvo_C 208 QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKT 287 (512)
T ss_pred CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCccc
Confidence 9999999999887665443 23332111
Q ss_pred -----CCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC-CcEEEEEECCEEccCCCc--eEEEEeCc----EEEEEEc
Q psy2166 300 -----KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP-ELKVEWFHNGKPIFHKNR--VKMVSDFG----FVVMDIA 367 (805)
Q Consensus 300 -----~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p-~~~v~W~~~g~~l~~~~~--~~~~~~~~----~~~l~i~ 367 (805)
...+|.+...+.....+.+|+.++|.|.+.+. .| ...|+|+++|..+..... ......++ ...|.|.
T Consensus 288 ~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~-~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~ 366 (512)
T 1zvo_C 288 PECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGS-DLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLP 366 (512)
T ss_pred ccCCCCCCCCEEEEECCChHHhccCCceEEEEEEece-ECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEc
Confidence 01234443333332236689999999999842 34 459999999998652111 01111122 2358999
Q ss_pred ccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeeccee
Q psy2166 368 YVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVT 447 (805)
Q Consensus 368 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (805)
.+..+|.|.|+|.|.|..+... ...+....
T Consensus 367 ~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~------------------------------------------------- 396 (512)
T 1zvo_C 367 RSLWNAGTSVTCTLNHPSLPPQ-RLMALREP------------------------------------------------- 396 (512)
T ss_pred hHHhcCCCeEEEEEEeCCCCCC-ceeEEeec-------------------------------------------------
Confidence 9999999999999999877543 22222100
Q ss_pred eecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEE-EEEEEeeCCCC
Q psy2166 448 QLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAH-FEARLTPVTDP 526 (805)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~-L~C~v~~~g~p 526 (805)
......+|.+....+.. .|+.+. |.|.+.++.++
T Consensus 397 -----------------------------------------~~~~~~~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~ 431 (512)
T 1zvo_C 397 -----------------------------------------AAQAPVKLSLNLLASSD----PPEAASWLLCEVSGFSPP 431 (512)
T ss_pred -----------------------------------------CCCCCCCCEEEEEccCc----CCCCceEEEEEEeeeCCC
Confidence 00002456655543332 789999 99999964344
Q ss_pred CcEEEEEECCEEccCCCce--E-EEeeCC-----EEEEEEccCCCCCCEEEEEEEEcCCcceEEEE
Q psy2166 527 DLVVEWFYNGKKLPHGHRY--R-TFHDFG-----IVILDILYCYEENSGVYECRATNKYGSDVTKA 584 (805)
Q Consensus 527 ~~~v~W~~~g~~l~~~~~~--~-~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 584 (805)
...++|+|||+++..+... . ....++ .+.|.|.....+|.|.|+|.|.|........+
T Consensus 432 ~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~ 497 (512)
T 1zvo_C 432 NILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNA 497 (512)
T ss_pred CcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEE
Confidence 5689999999999754211 1 122222 24577877777789999999999876644333
No 57
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=1.5e-30 Score=267.96 Aligned_cols=250 Identities=16% Similarity=0.172 Sum_probs=190.7
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
..+|.|...+... .+.+|++++|.|.+. + .++|+|+|..+ ......+ ..|.|.+++.+|+|.|+|.
T Consensus 10 ~~~P~i~~~~~~~-~v~~G~~v~l~C~~~--~----~i~W~~~~~~~-----~~~~~~~--~~L~i~~~~~~d~G~Y~C~ 75 (290)
T 2o26_X 10 PSPPSIHPAQSEL-IVEAGDTLSLTCIDP--D----FVRWTFKTYFN-----EMVENKK--NEWIQEKAEATRTGTYTCS 75 (290)
T ss_dssp --CCEESSCSSEE-EEETTSCEEEEEECT--T----EEEEEEECSSS-----CEEEECS--SEEEETTCCGGGCEEEEEE
T ss_pred CCCCEEeCCCCeE-EEcCCCcEEEEECCC--C----cEEEecCCcce-----eeecCCC--ceEEEeccCHHhCeEEEEE
Confidence 4677777544444 489999999999997 5 89999999877 1112222 5799999999999999999
Q ss_pred EEcCCcceEEEEEEEEeeeeee---------------eecC----CC-CeEEE-EECCEEccCCCceEEEeeCCEEEEEe
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNL---------------ILES----QL-PEVEW-FYNGKKLPHGHRYRTFHDFGIVILDI 631 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~---------------~~~~----~~-p~v~W-~~~g~~l~~~~~~~~~~~~~~~~L~i 631 (805)
|.| |. ...+.|.|..++.+ .+.| |. |.+.| ++||..+..+.++....++ .|.|
T Consensus 76 ~~n--g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i 149 (290)
T 2o26_X 76 NSN--GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKA---GITI 149 (290)
T ss_dssp ESS--SC-EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEETTT---EEEE
T ss_pred eeC--Cc-cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCCCC---CEEE
Confidence 999 54 77788888765432 2222 45 78999 5789988777666655443 3999
Q ss_pred ccCCCCCcE-EEEEEEEeCCcceEE-EEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCe
Q psy2166 632 LYCYEENSG-VYECRATNKYGSDVT-KASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI 709 (805)
Q Consensus 632 ~~~~~~d~G-~Y~C~a~n~~g~~~~-~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 709 (805)
.++..+|+| .|+|.|.|..|.... .+.|.|...+ ..+|.|...+.+. .+.+|+.
T Consensus 150 ~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~-----------------------~~~P~i~~~~~~~-~v~~G~~ 205 (290)
T 2o26_X 150 KNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI-----------------------KAIPVVSVPETSH-LLKKGDT 205 (290)
T ss_dssp ESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC-----------------------CSCCEEECSCSBC-CCCTTCC
T ss_pred ecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC-----------------------CCCCccccCCCcc-eEecCCc
Confidence 999999999 999999998665443 5778776321 1688998888888 9999999
Q ss_pred EEEEEEEeecCCCCeE-EEEEECCEEc----cCCCCeEEE---eeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEE
Q psy2166 710 AHFEASLIPVGDQTMT-VEFLYNGKPI----EASHRIRTV---HAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 781 (805)
Q Consensus 710 ~~l~C~~~~~g~p~~~-v~W~~~g~~l----~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 781 (805)
+.|.|.+. |.|.|. |+|+|+|..+ ......... .......|.|.++..+|+|.|+|.|.|.+|..+.++.
T Consensus 206 v~l~C~~~--g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 283 (290)
T 2o26_X 206 FTVVCTIK--DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTT 283 (290)
T ss_dssp EEEEEEEE--ESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEEEe--cCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEE
Confidence 99999999 889986 9999999773 433333222 1233458999999999999999999999999999999
Q ss_pred EEEEEeC
Q psy2166 782 LECVVWS 788 (805)
Q Consensus 782 l~V~~~~ 788 (805)
|.|...|
T Consensus 284 l~V~~~P 290 (290)
T 2o26_X 284 LKVVEKG 290 (290)
T ss_dssp ECC----
T ss_pred EEEEeCC
Confidence 9997543
No 58
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=2.4e-30 Score=269.46 Aligned_cols=249 Identities=13% Similarity=0.106 Sum_probs=181.4
Q ss_pred cccccCCCeEEEEEEEeeCCCCCc-----EEEEEECCEEc-------------cCCCceEEEee-----CCEEEEEEccC
Q psy2166 505 VTQLKEGQSAHFEARLTPVTDPDL-----VVEWFYNGKKL-------------PHGHRYRTFHD-----FGIVILDILYC 561 (805)
Q Consensus 505 ~~~v~~G~~v~L~C~v~~~g~p~~-----~v~W~~~g~~l-------------~~~~~~~~~~~-----~~~~~L~i~~v 561 (805)
...+..|++++|.|.+. +.+.+ .++|+|+|... ....++..... .+...|.|.++
T Consensus 9 ~v~~~~G~~v~L~C~v~--~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (313)
T 4fqp_A 9 QVPGFLGDSVTLPCYLQ--VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (313)
T ss_dssp EECCBTTSCEEECCEEE--CCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSC
T ss_pred EEEEecCCCEEEEEEEE--CCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcC
Confidence 33478999999999998 44443 59999987532 22233332211 12345999999
Q ss_pred CCCCCEEEEEEEE-cCCcceEEEEEEEEeeeeeee---------------------ecCCCCeEEEEECCEEccCCCceE
Q psy2166 562 YEENSGVYECRAT-NKYGSDVTKASLKCVSKTNLI---------------------LESQLPEVEWFYNGKKLPHGHRYR 619 (805)
Q Consensus 562 ~~~d~G~Y~C~a~-n~~g~~~~~~~l~V~~~~~~~---------------------~~~~~p~v~W~~~g~~l~~~~~~~ 619 (805)
+.+|+|.|+|.|. +..|.....+.|.+...|.+. -..|.|.+.|++++..+....+..
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~ 166 (313)
T 4fqp_A 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVP 166 (313)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEE
T ss_pred ChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceee
Confidence 9999999999886 556677777777776655421 124678999999987775433322
Q ss_pred EEeeCC---EEEEEeccCCCCCcEEEEEEEEeCCcceEEEE--EEEEeeccccccccccccccCCCCCCCCCCCCCCCee
Q psy2166 620 TFHDFG---IVILDILYCYEENSGVYECRATNKYGSDVTKA--SLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQF 694 (805)
Q Consensus 620 ~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~--~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~ 694 (805)
...++. ...|.|.....+|+|.|+|.|.|..+...... .|.|. .+|.|
T Consensus 167 ~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~---------------------------~~P~v 219 (313)
T 4fqp_A 167 GFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY---------------------------YPPEV 219 (313)
T ss_dssp CSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC---------------------------EEEEE
T ss_pred eecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc---------------------------cCCcc
Confidence 222222 23589999999999999999999887665544 44444 35666
Q ss_pred eecCCcccccCCCCeEEEEEEEeecCCCCe-EEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCC
Q psy2166 695 TSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 773 (805)
Q Consensus 695 ~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 773 (805)
...+.+...+.+|+.++|.|.+. |+|.| .|+|+|+|..+.... ...++ .|.|.+++.+|+|.|+|.|.|.+
T Consensus 220 ~~~~~~~~~~~~g~~v~l~C~~~--g~P~p~~v~W~~~~~~l~~~~----~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~ 291 (313)
T 4fqp_A 220 SISGYDNNWYLGQNEATLTCDAR--SNPEPTGYNWSTTMGPLPPFA----VAQGA--QLLIRPVDKPINTTLICNVTNAL 291 (313)
T ss_dssp EEECCCSCEETTCCCEEEEEEEE--EESCCCEEEEEETTBSCCTTE----EEETT--EEEECCCSSCCEEEEEEEEECSS
T ss_pred ccccccceeecCCCeEEEEEEec--CCCCCcEEEEEECCEECCCce----EEeCC--EEEECcCChhhCEEEEEEEEeCC
Confidence 55443332678899999999999 99998 699999999886542 22344 69999999999999999999999
Q ss_pred ccEEEEEEEEEEEeCCC
Q psy2166 774 GQAEISVNLECVVWSPS 790 (805)
Q Consensus 774 G~~~~~~~l~V~~~~~~ 790 (805)
|..+.+++|.|...||-
T Consensus 292 G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 292 GARQAELTVQVKEGPPH 308 (313)
T ss_dssp CEEEEEEEEEEECCC--
T ss_pred CcEEEEEEEEEEeCCCC
Confidence 99999999999877664
No 59
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=8.1e-28 Score=267.10 Aligned_cols=429 Identities=13% Similarity=0.097 Sum_probs=236.3
Q ss_pred ccCCCceEEEEEEEeeCCCC--C--eEEEEEEC--CEEcc----------------CCCcEEEEEE--cCeEEEEEcCCC
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ--T--MTVEFLYN--GKPIE----------------ASHRIRTVHA--FGMVVLEILGTK 269 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p--~--~~i~W~k~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~~~ 269 (805)
.+.+|+.++|.|.+. +.+ . ..+.|||. |..+. ...++....+ .+...|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 88 (512)
T 1zvo_C 11 LVKPSETLSLTCIVS--GGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMS 88 (512)
T ss_pred EEcCCCCEEEEEEEc--ccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCC
Confidence 478999999999984 332 2 78999985 32110 0234444332 235899999999
Q ss_pred CcccEEEEEEEEcCCe----------e---EEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc
Q psy2166 270 IEDTGVYTCRATNKWG----------Q---AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL 336 (805)
Q Consensus 270 ~~d~G~Y~C~~~n~~g----------~---~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~ 336 (805)
.+|+|.|.|.+.+..+ . ......|.|..... .+|.+............|+.++|.|.+.+ ..|.+
T Consensus 89 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~-~~P~i~~~~~~~~~~~~~~~v~L~C~~~g-~~P~p 166 (512)
T 1zvo_C 89 AADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPT-KAPDVFPIISGCRHPKDNSPVVLACLITG-YHPTS 166 (512)
T ss_pred HHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCC-cCCeEEeccCCcccccCCCeEEEEEEEEe-eecCc
Confidence 9999999999998642 1 12334566653221 24444422211110124689999999984 44654
Q ss_pred -EEEEEECCEEccCCCceEEEE-eC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEE-----------EEEEEecc
Q psy2166 337 -KVEWFHNGKPIFHKNRVKMVS-DF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRA-----------TIKCFGKG 400 (805)
Q Consensus 337 -~v~W~~~g~~l~~~~~~~~~~-~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~-----------~l~V~~~~ 400 (805)
.|+|++++............. ++ ....|.|.....+ .|.|+|.|.|..+...... .+.+..+|
T Consensus 167 ~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp 245 (512)
T 1zvo_C 167 VTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQP 245 (512)
T ss_pred eEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCC
Confidence 899999764321000000111 11 1235888877777 9999999999988765544 12222111
Q ss_pred cccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCC
Q psy2166 401 GVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPS 480 (805)
Q Consensus 401 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 480 (805)
. ....+.. ..+ .|.- +++| .+.-. .......+ ..+ ...+.
T Consensus 246 ~---------~~~~~~~---~~~------------~~~~---------~~~g-~~~~~-~~~~~~~~-~~h----~~~~~ 285 (512)
T 1zvo_C 246 Q---------AEGSLAK---ATT------------APAT---------TRNT-GRGGE-EKKKEKEK-EEQ----EERET 285 (512)
T ss_pred c---------hhccccc---ccc------------Cchh---------hccC-ccccc-ceeccCCc-ccc----cccCc
Confidence 1 0000000 000 0000 0011 00000 00000000 000 00000
Q ss_pred CCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEcc
Q psy2166 481 QGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILY 560 (805)
Q Consensus 481 ~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~ 560 (805)
. ...-.....+|.+.+..+....+.+|+.++|.|.+.++.++...|+|+|||+.+.... . ...
T Consensus 286 ~----~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~--~-----------~~~ 348 (512)
T 1zvo_C 286 K----TPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGV--E-----------EGL 348 (512)
T ss_pred c----cccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCce--e-----------ccc
Confidence 0 0000112356777665544444778999999999995422346999999998764210 0 000
Q ss_pred CCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcE
Q psy2166 561 CYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSG 640 (805)
Q Consensus 561 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G 640 (805)
......|.|.. .+.|.|.....+|.|
T Consensus 349 ~~~~~~gt~~~------------------------------------------------------~s~L~i~~~~~~d~g 374 (512)
T 1zvo_C 349 LERHSNGSQSQ------------------------------------------------------HSRLTLPRSLWNAGT 374 (512)
T ss_pred eecCCCCeEEE------------------------------------------------------EEEEEEchHHhcCCC
Confidence 01112233321 112777777888889
Q ss_pred EEEEEEEeCCcceEEEEEEEEe-eccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEE-EEEEEee
Q psy2166 641 VYECRATNKYGSDVTKASLKCV-SKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH-FEASLIP 718 (805)
Q Consensus 641 ~Y~C~a~n~~g~~~~~~~l~V~-~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~-l~C~~~~ 718 (805)
.|+|.|.|..+... ...+... ... ...+|.+...+.. . +|+.+. |.|.+.
T Consensus 375 ~y~C~a~n~~~~~~-~~~~~~~~~~~----------------------~~~~p~v~~~~~~--~--~~~~~~~L~C~~~- 426 (512)
T 1zvo_C 375 SVTCTLNHPSLPPQ-RLMALREPAAQ----------------------APVKLSLNLLASS--D--PPEAASWLLCEVS- 426 (512)
T ss_pred eEEEEEEeCCCCCC-ceeEEeecCCC----------------------CCCCCEEEEEccC--c--CCCCceEEEEEEe-
Confidence 99999988877654 3333221 000 0135665544332 1 799999 999999
Q ss_pred cCC-CC-eEEEEEECCEEccCCCCeE--E-EeeCcE-----EEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEe
Q psy2166 719 VGD-QT-MTVEFLYNGKPIEASHRIR--T-VHAFGM-----VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 719 ~g~-p~-~~v~W~~~g~~l~~~~~~~--~-~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 787 (805)
|. |+ ..|+|+|||+++....... . ...++. ..|.|.....+|+|.|+|+|.|........+...|.+.
T Consensus 427 -g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~ 504 (512)
T 1zvo_C 427 -GFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVS 504 (512)
T ss_pred -eeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEec
Confidence 64 33 4789999999987653211 1 222331 46888888888999999999999876555555555443
No 60
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=7.7e-30 Score=262.59 Aligned_cols=268 Identities=20% Similarity=0.188 Sum_probs=197.2
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.||.|...+... .+.+|+.++|.|.+ .+ .+.|+|+|..+ . . ....+ ..|.|.+++.+|+|.|+|.+
T Consensus 11 ~~P~i~~~~~~~-~v~~G~~v~l~C~~--~~----~i~W~~~~~~~----~-~-~~~~~-~~L~i~~~~~~d~G~Y~C~~ 76 (290)
T 2o26_X 11 SPPSIHPAQSEL-IVEAGDTLSLTCID--PD----FVRWTFKTYFN----E-M-VENKK-NEWIQEKAEATRTGTYTCSN 76 (290)
T ss_dssp -CCEESSCSSEE-EEETTSCEEEEEEC--TT----EEEEEEECSSS----C-E-EEECS-SEEEETTCCGGGCEEEEEEE
T ss_pred CCCEEeCCCCeE-EEcCCCcEEEEECC--CC----cEEEecCCcce----e-e-ecCCC-ceEEEeccCHHhCeEEEEEe
Confidence 578888665555 48899999999987 44 89999999876 1 1 11222 68999999999999999999
Q ss_pred EcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC-cEEEE-EECCEEccCCCceEEEEe
Q psy2166 281 TNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-LKVEW-FHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 281 ~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~~v~W-~~~g~~l~~~~~~~~~~~ 358 (805)
.| |. ...+.|.|.. +|.+....... .+.+|+.+.|.|.+. + |. +.+.| +++|..+....++....+
T Consensus 77 ~n--g~-~~~~~l~V~~-----~~~~~~~~~~~-~~~~g~~v~l~C~~~--~-p~~~~v~W~~~~g~~l~~~~~~~~~~~ 144 (290)
T 2o26_X 77 SN--GL-TSSIYVFVRD-----PAKLFLVGLPL-FGKEDSDALVRCPLT--D-PQVSQYSLIECDGKSLPTDLTFVPNPK 144 (290)
T ss_dssp SS--SC-EEEEEEEEEC-----SSCCBCCCCCE-EEETTSCEEECCCBS--C-CSCEEEEEEETTSCCCCTTCEEEEETT
T ss_pred eC--Cc-cEEEEEEEeC-----CCcccccccce-EEecCCeEEEeCcCC--C-CCCceEEEEeCCCcCCCCCCceeeCCC
Confidence 99 43 6667777764 33333333333 377999999999996 4 66 99999 568888876655544333
Q ss_pred CcEEEEEEcccCcCCce-EEEEEEEeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCC
Q psy2166 359 FGFVVMDIAYVQSHDSG-EYVCRAWNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEA 436 (805)
Q Consensus 359 ~~~~~l~i~~v~~~d~G-~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (805)
. .|.|.++..+|+| .|+|.|.|..+.... .+.|.|...
T Consensus 145 -~--~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~------------------------------------- 184 (290)
T 2o26_X 145 -A--GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREA------------------------------------- 184 (290)
T ss_dssp -T--EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECC-------------------------------------
T ss_pred -C--CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeC-------------------------------------
Confidence 2 5899999999999 999999998665443 466666421
Q ss_pred CceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEE
Q psy2166 437 PKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHF 516 (805)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L 516 (805)
...+|.+...+... .+.+|+.++|
T Consensus 185 -------------------------------------------------------~~~~P~i~~~~~~~-~v~~G~~v~l 208 (290)
T 2o26_X 185 -------------------------------------------------------IKAIPVVSVPETSH-LLKKGDTFTV 208 (290)
T ss_dssp -------------------------------------------------------CCSCCEEECSCSBC-CCCTTCCEEE
T ss_pred -------------------------------------------------------CCCCCccccCCCcc-eEecCCcEEE
Confidence 13667776665555 4899999999
Q ss_pred EEEEeeCCCCCcE-EEEEECCEEc----cCCCceEEE---eeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 517 EARLTPVTDPDLV-VEWFYNGKKL----PHGHRYRTF---HDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 517 ~C~v~~~g~p~~~-v~W~~~g~~l----~~~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
.|.+. |.|.|. |+|+|+|..+ ......... .......|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 209 ~C~~~--g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 286 (290)
T 2o26_X 209 VCTIK--DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKV 286 (290)
T ss_dssp EEEEE--ESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC
T ss_pred EEEEe--cCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEE
Confidence 99999 667775 9999999873 322222222 1123457999999999999999999999999999999988
Q ss_pred eeee
Q psy2166 589 VSKT 592 (805)
Q Consensus 589 ~~~~ 592 (805)
..+|
T Consensus 287 ~~~P 290 (290)
T 2o26_X 287 VEKG 290 (290)
T ss_dssp ----
T ss_pred EeCC
Confidence 7654
No 61
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=1.2e-31 Score=282.27 Aligned_cols=299 Identities=20% Similarity=0.342 Sum_probs=143.1
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFT 152 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 152 (805)
+..+.+.+|+.++|.|.+.+ ..|.+.|.|+|||..+..+.++.+.. .+|.|.+++.+|+|.|+|.|.|. |....
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~----~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~ 88 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPG-GGPMGPTVWVKDGTGLVPSERVLVGP----QRLQVLNASHEDSGAYSCRQRLT-QRVLC 88 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCC-CCCCcceEEEECCeeCCCcccEEecc----ceEEEeecccccCEEEEEEEEeC-CeEEE
Confidence 55789999999999999983 23678999999999998777776532 38999999999999999999998 77777
Q ss_pred EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc---cccccCCCceEEEEEEEee
Q psy2166 153 STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ---HLSNLSEGEIAHFEASLIP 229 (805)
Q Consensus 153 ~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~v~~g~~~~l~C~~~~ 229 (805)
...|.|...+............ .. ......+|.|..... ....+.+|+.+.|.|.+
T Consensus 89 ~~~l~V~~~~~~~~~~~~~~~~------~~-------------~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~-- 147 (334)
T 1ry7_B 89 HFSVRVTDAPSSGDDEDGEDEA------ED-------------TGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPA-- 147 (334)
T ss_dssp -------------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCC--
T ss_pred EEEEEEeccCcccccccccccc------cc-------------ccccCCCCEEeccccccceeEEecCCCcEEEEEEc--
Confidence 7777776543211000000000 00 000012344432211 12246789999999987
Q ss_pred CCCCCeEEEEEECCEEccCCCcEE-EEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEe
Q psy2166 230 VGDQTMTVEFLYNGKPIEASHRIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 308 (805)
Q Consensus 230 ~~~p~~~i~W~k~g~~l~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~ 308 (805)
.+.|.+.+.|+|+|..+....++. .....+...|.|.+++.+|+|.|+|.+.|..|.....+.|.|...+. .+|.+..
T Consensus 148 ~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~-~~p~~~~ 226 (334)
T 1ry7_B 148 AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP-HRPILQA 226 (334)
T ss_dssp CCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC-SSCBCCT
T ss_pred cCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC-CCCceEe
Confidence 688889999999999887654321 11223345899999999999999999999999988888888875322 1333333
Q ss_pred cCCCcccccCCCeEEEEEEEeecCCCCcEEEEEE----CCEEccCCCc--eEEEEe-------CcEEEEEEcccCcCCce
Q psy2166 309 HIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH----NGKPIFHKNR--VKMVSD-------FGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 309 ~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~----~g~~l~~~~~--~~~~~~-------~~~~~l~i~~v~~~d~G 375 (805)
.......+.+|+.++|.|.+. +.|.+.+.|++ +|..+..... +.+... .....|.|.++..+|+|
T Consensus 227 ~~~~~~~~~~G~~v~l~C~~~--g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 304 (334)
T 1ry7_B 227 GLPANQTAVLGSDVEFHCKVY--SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAG 304 (334)
T ss_dssp TCSCCEEEESSCCEEECCCCB--CSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCS
T ss_pred cCCCceEEeCCCCEEEEEEEe--cCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCE
Confidence 222333488999999999997 89999999999 7777654322 111111 11236999999999999
Q ss_pred EEEEEEEeCceeeEEEEEEEEEeccc
Q psy2166 376 EYVCRAWNKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 376 ~Y~C~a~n~~g~~~~~~~l~V~~~~~ 401 (805)
.|+|.|.|..|....++.|.|...+.
T Consensus 305 ~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 305 EYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp EEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred EEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 99999999999999999999986654
No 62
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=2.8e-30 Score=273.65 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=162.8
Q ss_pred eEecCCCcccccCCCeEEEEEEEeeCCCC-----------CcEEEEEECCE------Ecc-CCCceEEEeeCCEEEEEEc
Q psy2166 498 FITQISDVTQLKEGQSAHFEARLTPVTDP-----------DLVVEWFYNGK------KLP-HGHRYRTFHDFGIVILDIL 559 (805)
Q Consensus 498 ~~~~~~~~~~v~~G~~v~L~C~v~~~g~p-----------~~~v~W~~~g~------~l~-~~~~~~~~~~~~~~~L~i~ 559 (805)
+...+.....+.+|+.+.|.|.+. +.| .+.++|+|+|. .+. ......+...++ .|.|.
T Consensus 9 ~~~~~~~~v~v~~G~~v~L~C~~~--~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~ 84 (349)
T 4dep_C 9 WGLDTMRQIQVFEDEPARIKCPLF--EHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLWFR 84 (349)
T ss_dssp EEECCCCCCEEETTSCEEEECTCC--CCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEEES
T ss_pred cccceeeeEEEecCCeEEEEcccc--ccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEEEc
Confidence 334434444589999999999998 545 48999999883 222 011222333344 59999
Q ss_pred cCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee-------------------eeecC----------CCCeEEEEECCE
Q psy2166 560 YCYEENSGVYECRATNKYGSDVTKASLKCVSKTN-------------------LILES----------QLPEVEWFYNGK 610 (805)
Q Consensus 560 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~-------------------~~~~~----------~~p~v~W~~~g~ 610 (805)
+++.+|+|.|+|.|.|..|.....+.|.|..++. +.+.| |.|.+.|+|+|.
T Consensus 85 ~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~ 164 (349)
T 4dep_C 85 PTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCY 164 (349)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTE
T ss_pred cCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCE
Confidence 9999999999999999999999889998875332 23344 467999999999
Q ss_pred EccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCC-cce---EEEEEEEEeeccccccccccccccCCCCCCCCC
Q psy2166 611 KLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY-GSD---VTKASLKCVSKTNLILESQLPELRRQPAGVPDS 686 (805)
Q Consensus 611 ~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~ 686 (805)
.+....++ ..++. .|.|.++..+|+|.|+|.|.|.. |.. ...+.|.|..++..
T Consensus 165 ~l~~~~~~--~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~------------------- 221 (349)
T 4dep_C 165 KIQNFNNV--IPEGM--NLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN------------------- 221 (349)
T ss_dssp ECCSCSSE--EEETT--EEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG-------------------
T ss_pred ECCCccce--eecCC--EEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC-------------------
Confidence 99655443 33333 49999999999999999999987 554 56667777653211
Q ss_pred CCCCCCeeeecCCccc-ccCCCCeEEEEEEEeec--CCCCeEEEEEECCEEccC-CCCeEEEe-------eC--cEEEEE
Q psy2166 687 EDGRPPQFTSEFQHLS-NLSEGEIAHFEASLIPV--GDQTMTVEFLYNGKPIEA-SHRIRTVH-------AF--GMVVLE 753 (805)
Q Consensus 687 ~~~~~P~~~~~~~~~~-~v~~G~~~~l~C~~~~~--g~p~~~v~W~~~g~~l~~-~~~~~~~~-------~~--~~~~L~ 753 (805)
..+|.|...+.+.+ .+.+|+.++|.|.+.+. |.|.|.|.|+++|..+.. ..++.+.. ++ ...+|.
T Consensus 222 --~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 299 (349)
T 4dep_C 222 --AVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILS 299 (349)
T ss_dssp --CCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-
T ss_pred --CCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEE
Confidence 13677777665432 68899999999999843 568999999999998876 33332211 11 134599
Q ss_pred EcCCCCCCC-EEEEEEEEcCCccEEEEEEEEEEEeCCCc
Q psy2166 754 ILGTKIEDT-GVYTCRATNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 754 i~~v~~~d~-G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
|.++..+|+ |.|+|.|.|.+|....++.|.|.+.+|.+
T Consensus 300 i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~~~p~~ 338 (349)
T 4dep_C 300 IKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPRY 338 (349)
T ss_dssp ------------CEEEEECSSCEEEEECC----------
T ss_pred EeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeecCCCCC
Confidence 999999999 99999999999999999999997755543
No 63
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=3.3e-32 Score=297.33 Aligned_cols=378 Identities=12% Similarity=0.140 Sum_probs=221.7
Q ss_pred ccCCCceEEEEEEEeeCCC--CCeEEEEEECC--EEcc-----------------CCCcEEEEEE--cCeEEEEEcCCCC
Q psy2166 214 NLSEGEIAHFEASLIPVGD--QTMTVEFLYNG--KPIE-----------------ASHRIRTVHA--FGMVVLEILGTKI 270 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~--p~~~i~W~k~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~ 270 (805)
.+.+|+.++|.|.+ .+. +.+.+.|||++ ..+. ...++.+..+ .+...|.|.+++.
T Consensus 10 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (434)
T 1igy_B 10 LARPGASVKMSCKA--SGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTS 87 (434)
T ss_dssp EECTBCCEEECCEE--CSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCG
T ss_pred EecCCCCEEEEEEc--cCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCCh
Confidence 47899999999998 444 36789999863 2210 1234443332 2346899999999
Q ss_pred cccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccC
Q psy2166 271 EDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFH 349 (805)
Q Consensus 271 ~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~ 349 (805)
+|+|.|+|.+.|..+.....+.|.|..... .+|.+........ +.+|+.++|.|.+.+ ..|.+ .|.|++++..+..
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~-~~~G~~v~L~C~~~g-~~P~p~~v~W~k~~~~~~~ 164 (434)
T 1igy_B 88 DDSAVYYCVREGEVPYWGQGTTVTVSSAKT-TPPSVYPLAPGSA-AQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGV 164 (434)
T ss_dssp GGCSEECCCCSSSSCCCCCCEECEECCSCC-BCCCEEEECCCCC-CCCTTEEEEEEEEEE-EBSSCCEEEETTTTBCSSE
T ss_pred HHCEEEEEEEEccccccCCceEEEEccCCC-CCCeEEEcCCccc-cCCCCcEEEEEEEee-ecCCCeEEEEeeCCcCCCe
Confidence 999999999998644444445666653211 2344443332232 678999999999984 34665 9999999875321
Q ss_pred CCceEEEEeC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCC
Q psy2166 350 KNRVKMVSDF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQP 426 (805)
Q Consensus 350 ~~~~~~~~~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 426 (805)
.........+ ....|.|.++..+| |.|+|.|.|..|.......+.+...
T Consensus 165 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~--------------------------- 216 (434)
T 1igy_B 165 HTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDC--------------------------- 216 (434)
T ss_dssp EECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCC---------------------------
T ss_pred EecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCC---------------------------
Confidence 0000000001 11358899999889 9999999999887544433322100
Q ss_pred ccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcc
Q psy2166 427 VAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVT 506 (805)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 506 (805)
.|... .......|.+...++...
T Consensus 217 -------------------------------------------~~~v~--------------~~~~~~~p~v~~~~p~~~ 239 (434)
T 1igy_B 217 -------------------------------------------GCKPC--------------ICTVPEVSSVFIFPPKPK 239 (434)
T ss_dssp -------------------------------------------CCCCC--------------CCCCSSSCCEEEECCCHH
T ss_pred -------------------------------------------CCccc--------------cCCCCcCcEEEEeCCChH
Confidence 00000 000001144444333322
Q ss_pred c-ccCCCeEEEEEEEeeCCC--CCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEE
Q psy2166 507 Q-LKEGQSAHFEARLTPVTD--PDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK 583 (805)
Q Consensus 507 ~-v~~G~~v~L~C~v~~~g~--p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 583 (805)
. +.+|+.++|.|.+.+... +.+.|+|+|+|..+........ ...+.|.|.-.
T Consensus 240 ~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~--------------~~~~~~~~~~~----------- 294 (434)
T 1igy_B 240 DTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPR--------------EEQFNSTFRVV----------- 294 (434)
T ss_dssp HHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCC--------------CCCCSSSCCCC-----------
T ss_pred HhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcc--------------eeCCCCcEEEE-----------
Confidence 2 789999999999994311 2568999999987753321100 00111212100
Q ss_pred EEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEee
Q psy2166 584 ASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 663 (805)
Q Consensus 584 ~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 663 (805)
.. |.|.++..+|+|.|+|.|.|..|.......+.+.
T Consensus 295 --------~~-----------------------------------L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~- 330 (434)
T 1igy_B 295 --------SA-----------------------------------LPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKT- 330 (434)
T ss_dssp --------CC-----------------------------------EECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCC-
T ss_pred --------EE-----------------------------------EEECHHHccCCCcEEEEEECCCCCCceeEEEecc-
Confidence 00 4455555556666666666655543221111110
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC-CC-eEEEEEECCEEccCCCCe
Q psy2166 664 KTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-QT-MTVEFLYNGKPIEASHRI 741 (805)
Q Consensus 664 ~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~-~~v~W~~~g~~l~~~~~~ 741 (805)
.....+|.|...+... ...+|+.++|.|.+. |. |+ +.|+|+|||+.+......
T Consensus 331 ----------------------~~~~~~P~v~~~~~~~-~~~~~~~~~L~C~~~--g~~P~~~~v~W~k~g~~l~~~~~~ 385 (434)
T 1igy_B 331 ----------------------KGKPRAPQVYTIPPPK-EQMAKDKVSLTCMIT--DFFPEDITVEWQSDGQAPENYKNT 385 (434)
T ss_dssp ----------------------CSCCBCCCCEEECCCS-SSSSSSEEEEEEEEE--EEBCSCEEEEEEETTSCCSCCEEC
T ss_pred ----------------------CCCCcCCEEEEECCCH-HHhcCCcEEEEEEEE--eeECCCeEEEEEECCEecCCceec
Confidence 0011466666555444 345688899999998 63 43 599999999988543211
Q ss_pred EE-EeeCc----EEEEEEcCCCCCCCEEEEEEEEcCCcc
Q psy2166 742 RT-VHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQ 775 (805)
Q Consensus 742 ~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 775 (805)
.. ...++ ...|.|.....+|+|.|+|.|.|....
T Consensus 386 ~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 386 QPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp CCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred cceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 11 12222 235888888888999999999998653
No 64
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=2.6e-29 Score=261.60 Aligned_cols=276 Identities=16% Similarity=0.164 Sum_probs=196.3
Q ss_pred ecCCCCceecCCCcEEEEEEEecCCCCC---ceEEEEECCEec-------------CCCCceEEEec-----CcEEEEEE
Q psy2166 70 VPLKPEFKLGEAQPLHLEAQVEPKNDPN---LKIEWIFNGKPL-------------ELGSRFKTTAD-----FGFVTLDL 128 (805)
Q Consensus 70 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~---~~v~W~k~g~~i-------------~~~~~~~~~~~-----~~~~~L~I 128 (805)
+..|..+.+..|++++|.|.+.+...+. ..|.|+|+|... ....|+.+... .+..+|.|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (313)
T ss_dssp EECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEE
T ss_pred EcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEE
Confidence 4445578889999999999998432221 148999987532 23345544322 13457999
Q ss_pred cccccCCCeEEEEEEEe-CCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 129 TEVYDRDQGIYTCRAWN-LAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 129 ~~~~~~D~G~Y~C~a~n-~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
.+++.+|+|.|+|.+.+ ..+.....+.|.|..+ |.+..
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~-----------------------------------------P~~~~ 122 (313)
T 4fqp_A 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK-----------------------------------------PQNTA 122 (313)
T ss_dssp CSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBC-----------------------------------------CEEEE
T ss_pred CcCChhhCEEEEEEEeeccCcceeeeeeeeeccC-----------------------------------------Cccee
Confidence 99999999999999864 3555666666655433 33333
Q ss_pred ccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC---eEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
.+... .+..|+.+.+.|.+. .+.|.+.+.|++++..+...........+. .+.|.|.....+|+|.|+|.|.|..
T Consensus 123 ~~~~~-~~~~~~~~~~~C~~~-~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~ 200 (313)
T 4fqp_A 123 EVQKV-QLTGEPVPMARCVST-GGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHES 200 (313)
T ss_dssp EECCB-CCCSSCEEEEEEEEE-EEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTT
T ss_pred cccce-EeecCceEEEEEEcc-CccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccC
Confidence 33332 366788899999764 478889999999998775433222111111 2469999999999999999999976
Q ss_pred eeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccCCCceEEEEeCcE
Q psy2166 285 GQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFHKNRVKMVSDFGF 361 (805)
Q Consensus 285 g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~ 361 (805)
+.. ...+.|.|. .+|.+...+.....+.+|+.++|.|.+. |.|.| .|+|+|+|..+.... ...+.
T Consensus 201 ~~~~~~~~~~l~V~-----~~P~v~~~~~~~~~~~~g~~v~l~C~~~--g~P~p~~v~W~~~~~~l~~~~----~~~~~- 268 (313)
T 4fqp_A 201 FEKPQLLTVNLTVY-----YPPEVSISGYDNNWYLGQNEATLTCDAR--SNPEPTGYNWSTTMGPLPPFA----VAQGA- 268 (313)
T ss_dssp SSSCEEEEEECCBC-----EEEEEEEECCCSCEETTCCCEEEEEEEE--EESCCCEEEEEETTBSCCTTE----EEETT-
T ss_pred cCccceeeeecccc-----cCCccccccccceeecCCCeEEEEEEec--CCCCCcEEEEEECCEECCCce----EEeCC-
Confidence 654 344444443 4566665555554477899999999998 78877 699999999886432 12233
Q ss_pred EEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEeccc
Q psy2166 362 VVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 362 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 401 (805)
+|.|.++..+|+|.|+|.|.|..|....++.|.|..+|+
T Consensus 269 -~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 269 -QLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp -EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred -EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 599999999999999999999999999999999986654
No 65
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=2.6e-31 Score=279.72 Aligned_cols=278 Identities=19% Similarity=0.347 Sum_probs=142.3
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
.+.+|+.+.|.|.+. .+.|.+.+.|+|+|..+....++.. ....|.|.+++.+|+|.|+|.+.|. +.....+.|
T Consensus 19 ~v~~G~~v~l~C~~~-~~~p~~~v~W~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l 92 (334)
T 1ry7_B 19 VFGSGDAVELSCPPP-GGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSV 92 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCcEEEEeeCC-CCCCCcceEEEECCeeCCCcccEEe----ccceEEEeecccccCEEEEEEEEeC-CeEEEEEEE
Confidence 588999999999984 2336789999999998876655443 2357999999999999999999998 777777777
Q ss_pred EEeccCCC-----------------CCCeEEecC---CCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCce
Q psy2166 294 ECVDKSKG-----------------QPPKFTSHI---KSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV 353 (805)
Q Consensus 294 ~v~~~~~~-----------------~~p~~~~~~---~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~ 353 (805)
.|...+.. .+|.+.... .....+.+|+.++|.|.+. +.|.+.+.|++++..+....++
T Consensus 93 ~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~ 170 (334)
T 1ry7_B 93 RVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAA--GNPTPSISWLKNGREFRGEHRI 170 (334)
T ss_dssp --------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCC--CSSCCEEECCBTTBCCCTTSST
T ss_pred EEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEcc--CCCCCeEEEEECCEECcccccc
Confidence 77643211 123332111 1112367899999999997 7899999999999988754432
Q ss_pred E-EEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCc
Q psy2166 354 K-MVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAP 432 (805)
Q Consensus 354 ~-~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 432 (805)
. .........|.|.++..+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~------------------------------- 219 (334)
T 1ry7_B 171 GGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP------------------------------- 219 (334)
T ss_dssp TCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC-------------------------------
T ss_pred cceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC-------------------------------
Confidence 1 11112334699999999999999999999999988888888864321
Q ss_pred ccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCC
Q psy2166 433 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 512 (805)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~ 512 (805)
.+|.+....+....+.+|+
T Consensus 220 -------------------------------------------------------------~~p~~~~~~~~~~~~~~G~ 238 (334)
T 1ry7_B 220 -------------------------------------------------------------HRPILQAGLPANQTAVLGS 238 (334)
T ss_dssp -------------------------------------------------------------SSCBCCTTCSCCEEEESSC
T ss_pred -------------------------------------------------------------CCCceEecCCCceEEeCCC
Confidence 2333333333333488999
Q ss_pred eEEEEEEEeeCCCCCcEEEEEE----CCEEccCCCce--EEEee-------CCEEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 513 SAHFEARLTPVTDPDLVVEWFY----NGKKLPHGHRY--RTFHD-------FGIVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 513 ~v~L~C~v~~~g~p~~~v~W~~----~g~~l~~~~~~--~~~~~-------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
.++|.|.+. |.|.+.++|+| ||..+..+.+. .+... .....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 239 ~v~l~C~~~--g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 316 (334)
T 1ry7_B 239 DVEFHCKVY--SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGF 316 (334)
T ss_dssp CEEECCCCB--CSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCC
T ss_pred CEEEEEEEe--cCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCe
Confidence 999999998 78999999999 78777644331 11111 12236999999999999999999999999
Q ss_pred eEEEEEEEEeeeee
Q psy2166 580 DVTKASLKCVSKTN 593 (805)
Q Consensus 580 ~~~~~~l~V~~~~~ 593 (805)
...++.|.|...+.
T Consensus 317 ~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 317 SHHSAWLVVLPAEE 330 (334)
T ss_dssp EEEEEEEEEECSCC
T ss_pred EEEEEEEEEEECCC
Confidence 99999999987654
No 66
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=1.4e-29 Score=268.27 Aligned_cols=287 Identities=19% Similarity=0.210 Sum_probs=176.3
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCC-----------CceEEEEECCE------ecC-CCCceEEEecCcEEEEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDP-----------NLKIEWIFNGK------PLE-LGSRFKTTADFGFVTLD 127 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-----------~~~v~W~k~g~------~i~-~~~~~~~~~~~~~~~L~ 127 (805)
+.+.+....++.|.+|+.++|.|.+. +.| .+.|.|+|++. .+. ......+...++ +|.
T Consensus 7 ~~~~~~~~~~v~v~~G~~v~L~C~~~--~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~--~L~ 82 (349)
T 4dep_C 7 DDWGLDTMRQIQVFEDEPARIKCPLF--EHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD--VLW 82 (349)
T ss_dssp EEEEECCCCCCEEETTSCEEEECTCC--CCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETT--EEE
T ss_pred cccccceeeeEEEecCCeEEEEcccc--ccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCC--EEE
Confidence 44555656678999999999999998 444 48999999884 222 011222222233 799
Q ss_pred EcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 128 LTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 128 I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
|.+++.+|+|.|+|.|.|..+.......|.|..++... ++.+ .
T Consensus 83 i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~------------------------------------~~~~-~ 125 (349)
T 4dep_C 83 FRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCF------------------------------------NSPM-K 125 (349)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTS------------------------------------CCSC-C
T ss_pred EccCChhhCEEEEEEEecCCceEEEEEEEEEecCCccc------------------------------------Cccc-c
Confidence 99999999999999999998888888888887643211 0111 1
Q ss_pred ccccccccCCCceEEEEEEEe---eCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 208 EFQHLSNLSEGEIAHFEASLI---PVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~---~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
.+.. ..+.+|+.+.|.|.+. ..+.|.+.+.|+|+|..+....++. ..+ ..|.|.+++.+|+|.|+|.|.|..
T Consensus 126 ~~~~-~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~--~~~--~~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 126 LPVH-KLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI--PEG--MNLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp CCEE-EEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEE--EET--TEEEEESCCGGGCEEEEEEEEEEE
T ss_pred cCcc-eeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcccee--ecC--CEEEEeeeeecCCcEEEEEEEEee
Confidence 1111 1367999999999631 1367889999999999987654432 222 479999999999999999999975
Q ss_pred -eeE---EEEEEEEEeccCC-CCCCeEEecCCCcc-cccCCCeEEEEEEEeec--CCCCcEEEEEECCEEccC-CCceEE
Q psy2166 285 -GQA---EISVNLECVDKSK-GQPPKFTSHIKSLE-GLKDGDSAHFECTLTPV--NDPELKVEWFHNGKPIFH-KNRVKM 355 (805)
Q Consensus 285 -g~~---~~~~~l~v~~~~~-~~~p~~~~~~~~~~-~~~~g~~~~l~C~~~~~--~~p~~~v~W~~~g~~l~~-~~~~~~ 355 (805)
|.. +..+.|.|...+. ..+|.+........ .+.+|+.++|.|.+.+. +.|.+.+.|+++|..+.. ..++.+
T Consensus 201 ~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~ 280 (349)
T 4dep_C 201 NGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTI 280 (349)
T ss_dssp TTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCC
T ss_pred CCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCcccc
Confidence 443 5666666654211 11566554443321 47899999999999853 468899999999988865 222222
Q ss_pred EE-------e--CcEEEEEEcccCcCCc-eEEEEEEEeCceeeEEEEEEEEEe
Q psy2166 356 VS-------D--FGFVVMDIAYVQSHDS-GEYVCRAWNKYGEDFTRATIKCFG 398 (805)
Q Consensus 356 ~~-------~--~~~~~l~i~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~V~~ 398 (805)
.. + ....+|.|.++..+|. |.|+|.|.|..|.....+.|.|..
T Consensus 281 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 281 NESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp CEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred ccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 11 1 1233599999999999 999999999999999998888864
No 67
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=1.3e-28 Score=253.30 Aligned_cols=276 Identities=17% Similarity=0.190 Sum_probs=198.9
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEE
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT 281 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 281 (805)
+|.+...+... .+.+|+.++|.|.+ .+ .+.|++++... ...........|.|.+++.+|+|.|+|.+.
T Consensus 4 ~p~i~~~~~~~-~v~~G~~v~L~C~~--~~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 71 (289)
T 3ejj_X 4 APVIEPSGPEL-VVEPGETVTLRCVS--NG----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTEL 71 (289)
T ss_dssp CCEEESCSSEE-EECTTCCEEEEEEC--SS----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECC
T ss_pred CcEecCCCceE-EECCCCCEEEEEEe--CC----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEe
Confidence 45666555554 48899999999987 44 49999876432 122223344689999999999999999999
Q ss_pred cCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcE-EEEEE-CCEEccCCCceEEEEeC
Q psy2166 282 NKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELK-VEWFH-NGKPIFHKNRVKMVSDF 359 (805)
Q Consensus 282 n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~-v~W~~-~g~~l~~~~~~~~~~~~ 359 (805)
|..+.....+.|.|... +..+...+. ...+.+|+.+.|.|.+. +.+.+. +.|++ ++..+....++.+..+
T Consensus 72 ~~~~~~~~~~~l~V~~~----~~~~~~~~~-~~~v~~g~~v~L~C~~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~- 143 (289)
T 3ejj_X 72 EDPMAGSTTIHLYVKDP----AHSWNLLAQ-EVTVVEGQEAVLPCLIT--DPALKDSVSLMREGGRQVLRKTVYFFSPW- 143 (289)
T ss_dssp C-----CEEEEEEECCS----SCSEEESCS-EEEEETTSCEEECEEES--CGGGGGSEEEEEGGGEECCTTCCEEEETT-
T ss_pred ccCCcceeEEEEEEeCC----Ccceecccc-eEEEecCCceEeEEEcc--CCCcceEEEEEecCCeecCCCccEEECCC-
Confidence 98887788888888742 222444443 33488999999999997 555554 99986 7788876666655433
Q ss_pred cEEEEEEcccCcCCceEEEEEEE-eCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCc
Q psy2166 360 GFVVMDIAYVQSHDSGEYVCRAW-NKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPK 438 (805)
Q Consensus 360 ~~~~l~i~~v~~~d~G~Y~C~a~-n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (805)
+ .|.|.++..+|+|.|+|.|. +..+.....+.|.|...
T Consensus 144 ~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~--------------------------------------- 182 (289)
T 3ejj_X 144 R--GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV--------------------------------------- 182 (289)
T ss_dssp T--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESS---------------------------------------
T ss_pred C--CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEEC---------------------------------------
Confidence 3 48899999999999999999 44455556677776421
Q ss_pred eeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEE
Q psy2166 439 FITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEA 518 (805)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C 518 (805)
...+|.+...+.... +.+|+.++|.|
T Consensus 183 -----------------------------------------------------~~~~p~i~~~~~~~~-~~~g~~~~l~C 208 (289)
T 3ejj_X 183 -----------------------------------------------------HPEPPQIKLEPSKLV-RIRGEAAQIVC 208 (289)
T ss_dssp -----------------------------------------------------CCCCCEEEEESSSEE-CCSSSCEEEEE
T ss_pred -----------------------------------------------------CCCCCeEEecCCceE-EEeCCcEEEEE
Confidence 125677777666554 68999999999
Q ss_pred EEeeCCCCCcEEEEEECCEEccCCCceEEEe--eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 519 RLTPVTDPDLVVEWFYNGKKLPHGHRYRTFH--DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 519 ~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.+.+ +.|.+.+.|+++|..+.......... ......|.|.+++.+|+|.|+|.|.|..|....++.|.+...+.
T Consensus 209 ~~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 209 SATN-AEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEEE-SSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC----
T ss_pred EeCC-CCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEeccc
Confidence 9995 37899999999999987543222111 11245799999999999999999999999999999998876654
No 68
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=1.4e-29 Score=264.17 Aligned_cols=272 Identities=15% Similarity=0.157 Sum_probs=200.0
Q ss_pred CceecCCCcEEEEEEEecCCCC-CceEEEEECCEecC----CCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCee
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDP-NLKIEWIFNGKPLE----LGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGE 149 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~k~g~~i~----~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 149 (805)
.+.+.+|+.++|.|.+. +.+ .+.|.|+|+|..+. ...++.... + +|.|.+++.+|+|.|+|.|.|..|.
T Consensus 14 ~~~v~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~--~--~L~i~~v~~~D~G~Y~C~a~n~~g~ 87 (315)
T 1itb_B 14 ILVSSANEIDVRPCPLN--PNEHKGTITWYKDDSKTPVSTEQASRIHQHK--E--KLWFVPAKVEDSGHYYCVVRNSSYC 87 (315)
T ss_dssp CCEEETTSCCCCBCCCC--SCCCSSCCCEECTTSCSCSCCCTTSSSEECS--S--BEECTTCCGGGCSCCEECCCSSSCC
T ss_pred EEEEcCCCcEEEEeecc--CcCCCceEEEEeCCCcCccccccCCcEeccC--C--eEEECCCChhhCEEEEEEEeCCceE
Confidence 67899999999999998 454 78999999986543 234554442 2 7999999999999999999998877
Q ss_pred EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc--cccccCCCceEEEEEEE
Q psy2166 150 TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ--HLSNLSEGEIAHFEASL 227 (805)
Q Consensus 150 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~v~~g~~~~l~C~~ 227 (805)
......+.|... +|.+...+. ....+.+|+.+.|.|.+
T Consensus 88 ~~~~~~v~v~~~----------------------------------------~p~~~~~~~~~~~~~~~~g~~v~l~C~~ 127 (315)
T 1itb_B 88 LRIKISAKFVEN----------------------------------------EPNLCYNAQAIFKQKLPVAGDGGLVCPY 127 (315)
T ss_dssp CCEECCCEEECC----------------------------------------CTTSSSCGGGEEEEEEETTSCEEEECSS
T ss_pred EEEEEEEEEeCC----------------------------------------CCCcccccccccceEEecCCCeEEEEec
Confidence 665555554321 222221111 11236789999999975
Q ss_pred e----eCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEE-cCCeeE---EEEEEEEEeccC
Q psy2166 228 I----PVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT-NKWGQA---EISVNLECVDKS 299 (805)
Q Consensus 228 ~----~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~-n~~g~~---~~~~~l~v~~~~ 299 (805)
. ..+.|.+.+.|+|+|..+...... .....+ .|.|.+++.+|+|.|+|.|. |..|.. ...+.+.+....
T Consensus 128 ~~~~~~~g~p~~~i~W~k~~~~l~~~~~~-~~~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~ 204 (315)
T 1itb_B 128 MEFFKNENNELPKLQWYKDCKPLLLDNIH-FSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN 204 (315)
T ss_dssp CTTTCTTTTCCCCCEEEETTEECCCCSSS-EEEETT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC
T ss_pred ccccccCCCCCCEEEEEECCEECCCccce-EeecCc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC
Confidence 2 247888999999999998654322 122233 79999999999999999999 777765 344455454433
Q ss_pred CCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE-----Ee-------CcEEEEEEc
Q psy2166 300 KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV-----SD-------FGFVVMDIA 367 (805)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~-----~~-------~~~~~l~i~ 367 (805)
...+|.+...+.....+.+|+.++|.|.+. +.|.+.+.|+++|..+......... .. .....|.|.
T Consensus 205 ~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~--g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 282 (315)
T 1itb_B 205 KPTRPVIVSPANETMEVDLGSQIQLICNVT--GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 282 (315)
T ss_dssp CCCCCEECSCCSEEEECCSSSCEEEEEEEE--ECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEES
T ss_pred CCCCCEEecCCCCcEEEeCCCcEEEEEEEe--cCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEe
Confidence 346677765554433488999999999998 7888999999999999865432211 11 123479999
Q ss_pred ccCcCC-ceEEEEEEEeCceeeEEEEEEEEE
Q psy2166 368 YVQSHD-SGEYVCRAWNKYGEDFTRATIKCF 397 (805)
Q Consensus 368 ~v~~~d-~G~Y~C~a~n~~g~~~~~~~l~V~ 397 (805)
++..+| +|.|+|.|.|..|.....+.|.|.
T Consensus 283 ~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 283 EIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp SCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred ecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 999999 999999999999999999888764
No 69
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=1.8e-30 Score=270.84 Aligned_cols=269 Identities=17% Similarity=0.263 Sum_probs=198.0
Q ss_pred ccCCCceEEEEEEEeeCCCC-CeEEEEEECCEEccC----CCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ-TMTVEFLYNGKPIEA----SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 288 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p-~~~i~W~k~g~~l~~----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~ 288 (805)
.+.+|+.+.|.|.+ .+.| .+.+.|+|+|..+.. ..++.. .+ ..|.|.+++.+|+|.|+|.+.|..+...
T Consensus 16 ~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~--~~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 89 (315)
T 1itb_B 16 VSSANEIDVRPCPL--NPNEHKGTITWYKDDSKTPVSTEQASRIHQ--HK--EKLWFVPAKVEDSGHYYCVVRNSSYCLR 89 (315)
T ss_dssp EEETTSCCCCBCCC--CSCCCSSCCCEECTTSCSCSCCCTTSSSEE--CS--SBEECTTCCGGGCSCCEECCCSSSCCCC
T ss_pred EEcCCCcEEEEeec--cCcCCCceEEEEeCCCcCccccccCCcEec--cC--CeEEECCCChhhCEEEEEEEeCCceEEE
Confidence 47899999999988 5555 789999999875432 223222 22 2799999999999999999999988777
Q ss_pred EEEEEEEeccCCCCCCeEEecCC--CcccccCCCeEEEEEEE------eecCCCCcEEEEEECCEEccCCCceEEEEeCc
Q psy2166 289 ISVNLECVDKSKGQPPKFTSHIK--SLEGLKDGDSAHFECTL------TPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 360 (805)
Q Consensus 289 ~~~~l~v~~~~~~~~p~~~~~~~--~~~~~~~g~~~~l~C~~------~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~ 360 (805)
..+.+.+.. .+|.+...+. ....+..|+.+.|.|.+ . +.|.+.+.|++++..+...... +...+.
T Consensus 90 ~~~~v~v~~----~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~--g~p~~~i~W~k~~~~l~~~~~~-~~~~~~ 162 (315)
T 1itb_B 90 IKISAKFVE----NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNE--NNELPKLQWYKDCKPLLLDNIH-FSGVKD 162 (315)
T ss_dssp EECCCEEEC----CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTT--TTCCCCCEEEETTEECCCCSSS-EEEETT
T ss_pred EEEEEEEeC----CCCCcccccccccceEEecCCCeEEEEecccccccC--CCCCCEEEEEECCEECCCccce-EeecCc
Confidence 766666554 2333321111 11237789999999997 5 8899999999999998654322 223333
Q ss_pred EEEEEEcccCcCCceEEEEEEE-eCceeeEE---EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCC
Q psy2166 361 FVVMDIAYVQSHDSGEYVCRAW-NKYGEDFT---RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEA 436 (805)
Q Consensus 361 ~~~l~i~~v~~~d~G~Y~C~a~-n~~g~~~~---~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (805)
.|.|.++..+|+|.|+|.|. |..|.... .+.+.+...
T Consensus 163 --~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~------------------------------------- 203 (315)
T 1itb_B 163 --RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEE------------------------------------- 203 (315)
T ss_dssp --EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECC-------------------------------------
T ss_pred --eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecC-------------------------------------
Confidence 69999999999999999999 77776632 233322211
Q ss_pred CceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEE
Q psy2166 437 PKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHF 516 (805)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L 516 (805)
....+|.+...+.....+.+|+.++|
T Consensus 204 ------------------------------------------------------~~~~~P~~~~~~~~~~~~~~g~~v~l 229 (315)
T 1itb_B 204 ------------------------------------------------------NKPTRPVIVSPANETMEVDLGSQIQL 229 (315)
T ss_dssp ------------------------------------------------------CCCCCCEECSCCSEEEECCSSSCEEE
T ss_pred ------------------------------------------------------CCCCCCEEecCCCCcEEEeCCCcEEE
Confidence 01356777655554445899999999
Q ss_pred EEEEeeCCCCCcEEEEEECCEEccCCCceEE-----Eee-------CCEEEEEEccCCCCC-CEEEEEEEEcCCcceEEE
Q psy2166 517 EARLTPVTDPDLVVEWFYNGKKLPHGHRYRT-----FHD-------FGIVILDILYCYEEN-SGVYECRATNKYGSDVTK 583 (805)
Q Consensus 517 ~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~-----~~~-------~~~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~~~ 583 (805)
.|.+. |.|.|.++|++||..+....+... ... .....|.|.+++.+| +|.|+|.|.|..|.....
T Consensus 230 ~C~~~--g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~ 307 (315)
T 1itb_B 230 ICNVT--GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAY 307 (315)
T ss_dssp EEEEE--ECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEE
T ss_pred EEEEe--cCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEE
Confidence 99999 678889999999999987653222 111 124479999999999 999999999999999999
Q ss_pred EEEEEee
Q psy2166 584 ASLKCVS 590 (805)
Q Consensus 584 ~~l~V~~ 590 (805)
+.|.|.+
T Consensus 308 ~~l~v~~ 314 (315)
T 1itb_B 308 IQLIYPV 314 (315)
T ss_dssp EEEECCC
T ss_pred EEEEecC
Confidence 9998753
No 70
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=3.8e-30 Score=271.38 Aligned_cols=285 Identities=19% Similarity=0.209 Sum_probs=210.9
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecC-----CCCCceEEEEECCEec--CCCCceEEEecCcEEEEEEcccccCCC
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPK-----NDPNLKIEWIFNGKPL--ELGSRFKTTADFGFVTLDLTEVYDRDQ 136 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~-----~~p~~~v~W~k~g~~i--~~~~~~~~~~~~~~~~L~I~~~~~~D~ 136 (805)
..|.|...+. .+.+.+|+.++|.|.+.+. +.|.+.|.|+|+|..+ ....+..+...++ +|.|.+++.+|+
T Consensus 17 ~~p~~~~~~~-~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~ 93 (339)
T 3o4o_C 17 SCRFRGRHYK-REFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDS 93 (339)
T ss_dssp -CEEEEECSC-CEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCC
T ss_pred hhHhhCcCce-EEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccC
Confidence 4577776665 7899999999999998621 5788899999999874 3332333333333 799999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 137 GIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 137 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
|.|+|.+.|..|.......|.|..++.... + +...+ ..+.
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~------------------------------------~-~~~~~---~~~~ 133 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAFL------------------------------------P-FISYP---QILT 133 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGGH------------------------------------H-HHCEE---EEEE
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCccc------------------------------------c-ccccc---eEEE
Confidence 999999999999888888888876542110 0 00000 1367
Q ss_pred CCceEEEEEEEe---eCCCCCeEEEEEECCEEccCC-CcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCe----eEE
Q psy2166 217 EGEIAHFEASLI---PVGDQTMTVEFLYNGKPIEAS-HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG----QAE 288 (805)
Q Consensus 217 ~g~~~~l~C~~~---~~~~p~~~i~W~k~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g----~~~ 288 (805)
+|+.+.|.|.+. ..+.|.+.+.|+|+|..+... .++... .+...|.|.+++.+|+|.|+|.|.|..+ ...
T Consensus 134 ~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 211 (339)
T 3o4o_C 134 LSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNIT 211 (339)
T ss_dssp TTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEE
T ss_pred CCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEc--CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEE
Confidence 999999999821 167888999999999998765 344322 2224799999999999999999999776 457
Q ss_pred EEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEE---eecCCC-CcEEEEEECCEEccCC---------CceEE
Q psy2166 289 ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTL---TPVNDP-ELKVEWFHNGKPIFHK---------NRVKM 355 (805)
Q Consensus 289 ~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~---~~~~~p-~~~v~W~~~g~~l~~~---------~~~~~ 355 (805)
..+.|.|.......+|.+...+... .+.+|+.+.|.|.+ . +.| .+.+.|+++|..+... .++.+
T Consensus 212 ~~~~l~V~~~~~~~~P~i~~~~~~~-~v~~G~~v~L~C~~~~~~--g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~ 288 (339)
T 3o4o_C 212 RSIELRIKKKKEETIPVIISPLKTI-SASLGSRLTIPCKVFLGT--GTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEY 288 (339)
T ss_dssp EEEEEEEECCCCCCCCEECCCSCCC-CCCCCSCCCCCCCEEESS--SCCSSCEEEEESSSSCSSSSSCSSSCEECCCEEC
T ss_pred EEEEEEEEcCCCCCCCEEecCCcee-EeccCCCEEEEEEEECCC--CCCCCceEEEEECCeecccccccccceecceEEe
Confidence 7788888765444566766554433 48899999999999 6 778 8899999999876422 22222
Q ss_pred EEeCc---EEEEEEcccCcCCc-eEEEEEEEeCceeeEEEEEEEE
Q psy2166 356 VSDFG---FVVMDIAYVQSHDS-GEYVCRAWNKYGEDFTRATIKC 396 (805)
Q Consensus 356 ~~~~~---~~~l~i~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~V 396 (805)
..++. ...|.|.++..+|. |.|+|.|.|..|.....+.+.+
T Consensus 289 ~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 289 SENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred cccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 22222 22699999999997 9999999999999988776654
No 71
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=8.5e-30 Score=264.77 Aligned_cols=272 Identities=14% Similarity=0.126 Sum_probs=193.5
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecC-----------------CCCceEEEe-cCcEEEEEEcccccCCC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLE-----------------LGSRFKTTA-DFGFVTLDLTEVYDRDQ 136 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~-----------------~~~~~~~~~-~~~~~~L~I~~~~~~D~ 136 (805)
++.+.+|++++|.|.+.+ +.+.+.|+|+|++.... ...|+.+.. ..+..+|.|.+++.+|+
T Consensus 8 ~vtv~~G~~v~L~C~v~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEV-NETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp SCEEETTSCEEECCBCCC-SSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred EeEEEcCCcEEEEEEecC-CCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 678999999999999873 35666899999653221 112333321 12345799999999999
Q ss_pred eEEEEEEEeC-CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 137 GIYTCRAWNL-AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 137 G~Y~C~a~n~-~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
|.|+|.|.|. .|.......+.+...+... +...+.. ...
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~---------------------------------------~~~~~~~-~~~ 126 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVS---------------------------------------LIKGPDS-LID 126 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEE---------------------------------------EEECSSC-CCT
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccc---------------------------------------cccccce-eEE
Confidence 9999999886 5666777777776543221 1111112 235
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE-EEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE--EEEE
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE--ISVN 292 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~--~~~~ 292 (805)
..|+.+.|.|.+. .+.|.+.+.|++++..+........ ........|.|..+..+|+|.|+|.|.|..+... .++.
T Consensus 127 ~~~~~~~l~C~~~-~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~ 205 (308)
T 4fom_A 127 GGNETVAAICIAA-TGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFI 205 (308)
T ss_dssp TCSCEEEEEEEEE-EEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred cCCceEEEEEEec-CCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEE
Confidence 6789999999764 5788999999999987754321100 0011135799999999999999999999876544 4444
Q ss_pred EEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccCCCceEEEEeCcEEEEEEcccCc
Q psy2166 293 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQS 371 (805)
Q Consensus 293 l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~ 371 (805)
|.|. .+|.+...+.+...+..|+.++|.|.+. +.|.| .+.|+|++..+...... . ....|.|.++..
T Consensus 206 l~V~-----~~P~~~~~~~~~~~~~~g~~v~l~C~~~--g~P~p~~v~W~k~~~~~~~~~~~----~-~~~~l~i~~v~~ 273 (308)
T 4fom_A 206 LDIQ-----YAPEVSVTGYDGNWFVGRKGVNLKCNAD--ANPPPFKSVWSRLDGQWPDGLLA----S-DNTLHFVHPLTF 273 (308)
T ss_dssp CCCC-----EEEEECCBCCCSCEETTCCSCEEECCEE--EESCEEEEECCBSSSCCCSSCBC----S-TTEEECCSCCCS
T ss_pred EEEe-----cCCeeEEcccceeeeeccccEEEEEEEe--cCCCCcEEEEEECCeECCCcEEE----c-CCeEEEECCCCh
Confidence 4443 4556655555554577899999999998 77877 69999999887644221 1 223467889999
Q ss_pred CCceEEEEEEEeCceeeEEEEEEEEEecc
Q psy2166 372 HDSGEYVCRAWNKYGEDFTRATIKCFGKG 400 (805)
Q Consensus 372 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 400 (805)
+|+|.|+|.|.|..|....++.|.|.++|
T Consensus 274 ~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 274 NYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp CCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred hhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 99999999999999999999999998765
No 72
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=2.6e-28 Score=255.81 Aligned_cols=265 Identities=15% Similarity=0.145 Sum_probs=191.5
Q ss_pred CceecCCCcEEEEEEEecCC-------CCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCe-EEEEEEEeC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKN-------DPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQG-IYTCRAWNL 146 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~-------~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~n~ 146 (805)
.+.+.+|+.++|.|.+.+.. +|.+.|+|+|++..+....+. . .++ +|.|.+++.+|+| .|+|.|.|.
T Consensus 38 ~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~-~~~---~L~i~~v~~~D~Gs~Y~C~a~n~ 112 (329)
T 3oq3_B 38 NDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-V-KNG---DLWIANYTSNDSHRRYLCTVTTK 112 (329)
T ss_dssp EEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-E-ETT---EEEESSCCGGGGGCCEEEEEECT
T ss_pred eEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-e-ecc---eEEEcCCChHhCCCcEEEEEEeC
Confidence 56799999999999998532 377899999999877655444 2 222 7999999999999 999999998
Q ss_pred CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEE
Q psy2166 147 AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEAS 226 (805)
Q Consensus 147 ~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~ 226 (805)
.|.......+.|.. .||.+...... ..+.+|+.+.|.|.
T Consensus 113 ~g~~~~~~~~~v~~----------------------------------------~~p~~~~~~~~-~~~~~G~~v~L~C~ 151 (329)
T 3oq3_B 113 NGDCVQGIVRSHIR----------------------------------------KPPSCIPETYE-LGTHDKYGIDLYCG 151 (329)
T ss_dssp TSCEEEEEEEEEEC----------------------------------------CCCSCEEEEEE-TTSSTTTCEEEECC
T ss_pred CCceeeEEEEEEEc----------------------------------------CCCcEeccccc-eEEeCCCcEEEEec
Confidence 87654443333332 12332222222 23678999999998
Q ss_pred EeeCCCC-CeEEEEEECCEEccCC-CcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcC--CeeE----EEEEEEEEecc
Q psy2166 227 LIPVGDQ-TMTVEFLYNGKPIEAS-HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK--WGQA----EISVNLECVDK 298 (805)
Q Consensus 227 ~~~~~~p-~~~i~W~k~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~--~g~~----~~~~~l~v~~~ 298 (805)
+ .+.| .+.+.|+|+|..+... .++... + ..|.|.+++.+|+|.|+|.|.|. .|.. +..+.|.|...
T Consensus 152 ~--~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~ 225 (329)
T 3oq3_B 152 I--LYAKHYNNITWYKNNQELIIDGTKYSQS--G--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPS 225 (329)
T ss_dssp C--CSCCCCCEEEEEETTEECCCSSSSEEEE--T--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECC
T ss_pred c--CCCCCCceEEEEECCccCCCCCceEecC--C--CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECC
Confidence 7 6888 8999999999998633 343322 2 47999999999999999999986 4433 33366777643
Q ss_pred CCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC---Cc-EEEEEECCEEc-cCCCceEEE--EeC--cEEEEEEccc
Q psy2166 299 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP---EL-KVEWFHNGKPI-FHKNRVKMV--SDF--GFVVMDIAYV 369 (805)
Q Consensus 299 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p---~~-~v~W~~~g~~l-~~~~~~~~~--~~~--~~~~l~i~~v 369 (805)
+....|.+ .+.. ..+.+|+.++|.|.+. +.| .+ .+.|+++|..+ ....+.... ..+ ....|.|.++
T Consensus 226 ~~~~~~~~--~~~~-~~v~~G~~~~l~C~~~--g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v 300 (329)
T 3oq3_B 226 QDHRFKLI--LDPK-INVTIGEPANITCTAV--STSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENV 300 (329)
T ss_dssp CCCCEEEE--CCSE-EEECTTSCEEEEEEEE--ETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSC
T ss_pred CCCCCcee--cCCe-eEEecCCCEEEEEEEE--ECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEec
Confidence 21111222 3333 3488999999999998 555 66 89999999885 333332221 122 3457999999
Q ss_pred CcCCce-EEEEEEEeCceeeEEEEEEEE
Q psy2166 370 QSHDSG-EYVCRAWNKYGEDFTRATIKC 396 (805)
Q Consensus 370 ~~~d~G-~Y~C~a~n~~g~~~~~~~l~V 396 (805)
..+|+| .|+|.|.|..|.....+.|.|
T Consensus 301 ~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 301 TEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred cHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 999999 999999999999998888775
No 73
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=2.3e-28 Score=251.40 Aligned_cols=274 Identities=16% Similarity=0.218 Sum_probs=197.2
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEe
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWN 145 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 145 (805)
|.++...+..+.+.+|+.++|.|.+. + .|.|++++... ..........+|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~--~----~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 72 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSN--G----SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELE 72 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECS--S----CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC
T ss_pred CcEecCCCceEEECCCCCEEEEEEeC--C----cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEec
Confidence 34444555578899999999999987 3 49999876432 2233333445899999999999999999999
Q ss_pred CCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEE
Q psy2166 146 LAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEA 225 (805)
Q Consensus 146 ~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C 225 (805)
..+.......|.|..++.. +...+.. ..+.+|+.+.|.|
T Consensus 73 ~~~~~~~~~~l~V~~~~~~----------------------------------------~~~~~~~-~~v~~g~~v~L~C 111 (289)
T 3ejj_X 73 DPMAGSTTIHLYVKDPAHS----------------------------------------WNLLAQE-VTVVEGQEAVLPC 111 (289)
T ss_dssp -----CEEEEEEECCSSCS----------------------------------------EEESCSE-EEEETTSCEEECE
T ss_pred cCCcceeEEEEEEeCCCcc----------------------------------------eecccce-EEEecCCceEeEE
Confidence 8887777778887653311 2222222 2478999999999
Q ss_pred EEeeCCCCCeE-EEEEE-CCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEE-cCCeeEEEEEEEEEeccCCCC
Q psy2166 226 SLIPVGDQTMT-VEFLY-NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT-NKWGQAEISVNLECVDKSKGQ 302 (805)
Q Consensus 226 ~~~~~~~p~~~-i~W~k-~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~-n~~g~~~~~~~l~v~~~~~~~ 302 (805)
.+ .+.+.+. +.|++ ++..+....++.... + ..|.|.+++.+|+|.|+|.+. +..+..+..+.|.|.... ..
T Consensus 112 ~~--~~~~~~~~v~W~~~~~~~~~~~~~~~~~~-~--~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~-~~ 185 (289)
T 3ejj_X 112 LI--TDPALKDSVSLMREGGRQVLRKTVYFFSP-W--RGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVH-PE 185 (289)
T ss_dssp EE--SCGGGGGSEEEEEGGGEECCTTCCEEEET-T--TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSC-CC
T ss_pred Ec--cCCCcceEEEEEecCCeecCCCccEEECC-C--CCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECC-CC
Confidence 98 5555554 99986 777777666654422 2 359999999999999999999 555556667777776432 14
Q ss_pred CCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe--CcEEEEEEcccCcCCceEEEEE
Q psy2166 303 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCR 380 (805)
Q Consensus 303 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y~C~ 380 (805)
+|.+...+.... +.+|+.++|.|.+.+ +.|.+.+.|++++..+........... .....|.|.++..+|+|.|+|.
T Consensus 186 ~p~i~~~~~~~~-~~~g~~~~l~C~~~~-~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 263 (289)
T 3ejj_X 186 PPQIKLEPSKLV-RIRGEAAQIVCSATN-AEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCV 263 (289)
T ss_dssp CCEEEEESSSEE-CCSSSCEEEEEEEEE-SSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEE
T ss_pred CCeEEecCCceE-EEeCCcEEEEEEeCC-CCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEE
Confidence 667766666554 678999999999983 478999999999998865422211000 1234799999999999999999
Q ss_pred EEeCceeeEEEEEEEEEec
Q psy2166 381 AWNKYGEDFTRATIKCFGK 399 (805)
Q Consensus 381 a~n~~g~~~~~~~l~V~~~ 399 (805)
|.|..|....++.|.+..+
T Consensus 264 a~N~~G~~~~s~~L~~~~~ 282 (289)
T 3ejj_X 264 ASNDVGTRTATMNFQVVES 282 (289)
T ss_dssp EECSSCEEEEEEEEECC--
T ss_pred EEcCCCCccccEEEEEEec
Confidence 9999999999999987544
No 74
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.96 E-value=1.5e-30 Score=274.41 Aligned_cols=284 Identities=16% Similarity=0.208 Sum_probs=208.3
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeC-----CCCCeEEEEEECCEEc--cCCCcEEEEEEcCeEEEEEcCCCCccc
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPV-----GDQTMTVEFLYNGKPI--EASHRIRTVHAFGMVVLEILGTKIEDT 273 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~-----~~p~~~i~W~k~g~~l--~~~~~~~~~~~~~~~~L~i~~~~~~d~ 273 (805)
..|.|...+.+. .+.+|+.+.|.|.+... +.|.+.+.|+|+|..+ ......++...++ .|.|.+++.+|+
T Consensus 17 ~~p~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~ 93 (339)
T 3o4o_C 17 SCRFRGRHYKRE-FRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDS 93 (339)
T ss_dssp -CEEEEECSCCE-EEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCC
T ss_pred hhHhhCcCceEE-EEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccC
Confidence 467788877766 48899999999987211 7888999999999874 3332333333444 799999999999
Q ss_pred EEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEE-----EeecCCCCcEEEEEECCEEcc
Q psy2166 274 GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECT-----LTPVNDPELKVEWFHNGKPIF 348 (805)
Q Consensus 274 G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~-----~~~~~~p~~~v~W~~~g~~l~ 348 (805)
|.|+|.+.|..+.....+.|.|...+. ...........+.+|+.+.|.|. +. +.|.+.+.|+++|..+.
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~----~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~--g~p~~~v~W~k~g~~~~ 167 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTD----AFLPFISYPQILTLSTSGVLVCPDLSEFTR--DKTDVKIQWYKDSLLLD 167 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCG----GGHHHHCEEEEEETTSCEEEECCSCTTTCC--SSSCCCBCCEESSCBCC
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCC----ccccccccceEEECCCCEEEEecCCccccc--CCCCceEEEecCCeeCC
Confidence 999999999999888888888875321 11001111123789999999999 55 78899999999999987
Q ss_pred CC-CceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCce----eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccC
Q psy2166 349 HK-NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYG----EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQG 423 (805)
Q Consensus 349 ~~-~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~ 423 (805)
.. .++.+..+. ..|.|.++..+|+|.|+|.|.|..| .....+.|.|...+.
T Consensus 168 ~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~---------------------- 223 (339)
T 3o4o_C 168 KDNEKFLSVRGT--THLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE---------------------- 223 (339)
T ss_dssp TTCSSEEECTTS--SEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCC----------------------
T ss_pred CCCceeEEcCCc--ceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCC----------------------
Confidence 55 344433322 2699999999999999999999887 455567777653221
Q ss_pred CCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCC
Q psy2166 424 QQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQIS 503 (805)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 503 (805)
..+|.+...+.
T Consensus 224 ---------------------------------------------------------------------~~~P~i~~~~~ 234 (339)
T 3o4o_C 224 ---------------------------------------------------------------------ETIPVIISPLK 234 (339)
T ss_dssp ---------------------------------------------------------------------CCCCEECCCSC
T ss_pred ---------------------------------------------------------------------CCCCEEecCCc
Confidence 23566655533
Q ss_pred CcccccCCCeEEEEEEE---eeCCCC-CcEEEEEECCEEccC---------CCceEEEeeCC---EEEEEEccCCCCCC-
Q psy2166 504 DVTQLKEGQSAHFEARL---TPVTDP-DLVVEWFYNGKKLPH---------GHRYRTFHDFG---IVILDILYCYEENS- 566 (805)
Q Consensus 504 ~~~~v~~G~~v~L~C~v---~~~g~p-~~~v~W~~~g~~l~~---------~~~~~~~~~~~---~~~L~i~~v~~~d~- 566 (805)
. ..+.+|+.++|.|.+ . |.| .+.+.|+++|..+.. +.++....++. .+.|.|.+++.+|+
T Consensus 235 ~-~~v~~G~~v~L~C~~~~~~--g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~ 311 (339)
T 3o4o_C 235 T-ISASLGSRLTIPCKVFLGT--GTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLH 311 (339)
T ss_dssp C-CCCCCCSCCCCCCCEEESS--SCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCC
T ss_pred e-eEeccCCCEEEEEEEECCC--CCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcC
Confidence 3 348999999999999 6 667 889999999987642 22222222332 22699999999998
Q ss_pred EEEEEEEEcCCcceEEEEEEEEe
Q psy2166 567 GVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 567 G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
|.|+|.|.|..|..+..+.|.+.
T Consensus 312 G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 312 MDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp CCCEEEEEETTEEECCBCCCCC-
T ss_pred ccEEEEEEeccCceEEEEEhhHh
Confidence 99999999999999887766543
No 75
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.8e-27 Score=240.89 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=185.3
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCc-eEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNL-KIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
+|.|...+. .+.+.+|+.++|.|.+. +.|.+ .|+|+|+|..+..... +|.|.+++.+|+|.|+|.+
T Consensus 1 kP~i~~~p~-~~~v~~G~~v~l~C~~~--~~~~~~~~~W~~~g~~~~~~~~----------~l~i~~~~~~d~G~Y~C~~ 67 (262)
T 3rjd_A 1 KAVITLQPP-WVSVFQEETVTLHCEVL--HLPGSSSTQWFLNGTATQTSTP----------SYRITSASVNDSGEYRCQR 67 (262)
T ss_dssp CCEEEESSC-CSEEETTCCEEEEEECS--SCCCTTCEEEEETTEECSCCSS----------EEEESSCCGGGCEEEEEEE
T ss_pred CCeEecCCC-cEEeeCCCeEEEEEECC--CCCCCceEEEEECCEEeeccCC----------eEEEecCCcccCeEEEEEE
Confidence 477777665 57899999999999998 56666 9999999999875422 6999999999999999999
Q ss_pred EeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEE
Q psy2166 144 WNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHF 223 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 223 (805)
.|..+.. ...|.|..++ +...+... .+.+|+.+.|
T Consensus 68 ~~~~~s~--~~~l~v~~~~------------------------------------------~~~~~~~~-~~~~g~~v~l 102 (262)
T 3rjd_A 68 GLSGRSD--PIQLEIHRGW------------------------------------------LLLQVSSR-VFTEGEPLAL 102 (262)
T ss_dssp SSSCCCC--CEEEEEECSS------------------------------------------EEEEESCS-EEETTSCEEE
T ss_pred ecCCccc--cEEEEEeccc------------------------------------------eEecCCCe-EEecCCeEEE
Confidence 8865543 3455554321 11111222 3678999999
Q ss_pred EEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCC
Q psy2166 224 EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQP 303 (805)
Q Consensus 224 ~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~ 303 (805)
.|.+. .+.|.+.+.|+++|..+... .....|.|.+++.+|+|.|+|.+.|..+..+..+.|.|.... .+
T Consensus 103 ~C~~~-~~~p~~~v~W~~~g~~~~~~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~--~~ 171 (262)
T 3rjd_A 103 RCHAW-KDKLVYNVLYYRNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF--PA 171 (262)
T ss_dssp EEEEG-GGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSS--CC
T ss_pred EEEcc-CCCCCceEEEEECCcccccc--------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCC--CC
Confidence 99874 46788999999999887422 112469999999999999999999999888888888887532 35
Q ss_pred CeEEecCCCcccccCCCeEEEEEEEeecCCCC-c----EEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEE
Q psy2166 304 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-L----KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 378 (805)
Q Consensus 304 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~----~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 378 (805)
|.+...+ .. .+.+|+.+.|.|.+. +.|. + .+.|++++..+... .....|.|.++..+|+|.|+
T Consensus 172 p~~~~~~-~~-~~~~g~~~~l~C~~~--~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~ 239 (262)
T 3rjd_A 172 PVLNASV-TS-PLLEGNLVTLSCETK--LLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARREDSGLYW 239 (262)
T ss_dssp CEEEESS-CS-SEETTCCEEEEEECC--CCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCGGGCEEEE
T ss_pred CeEeecC-ce-eecCCCeEEEEeEcc--cCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEechhhCeEEE
Confidence 5555544 22 378999999999997 6554 3 37899999877421 12336999999999999999
Q ss_pred EEEEeCceee
Q psy2166 379 CRAWNKYGED 388 (805)
Q Consensus 379 C~a~n~~g~~ 388 (805)
|.|.|..|..
T Consensus 240 C~a~n~~G~~ 249 (262)
T 3rjd_A 240 CEAATEDGNV 249 (262)
T ss_dssp EEEEETTSSC
T ss_pred EEEEcccCce
Confidence 9999999965
No 76
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=262.34 Aligned_cols=273 Identities=12% Similarity=0.106 Sum_probs=191.0
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccC-----------------CCcEEEEE-EcCeEEEEEcCCCCcccEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA-----------------SHRIRTVH-AFGMVVLEILGTKIEDTGV 275 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~-----------------~~~~~~~~-~~~~~~L~i~~~~~~d~G~ 275 (805)
.+.+|++++|.|.+. .+.+.+.+.|+|++..... ..+..... ..+..+|.|.+++.+|+|.
T Consensus 10 tv~~G~~v~L~C~v~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 88 (308)
T 4fom_A 10 TAVWGKNVSLKCLIE-VNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGK 88 (308)
T ss_dssp EEETTSCEEECCBCC-CSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEE
T ss_pred EEEcCCcEEEEEEec-CCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEE
Confidence 367899999999873 2456678999996532210 11111111 1134579999999999999
Q ss_pred EEEEEEcC-CeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceE
Q psy2166 276 YTCRATNK-WGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 354 (805)
Q Consensus 276 Y~C~~~n~-~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~ 354 (805)
|+|.|.|. .+..+..+.+.+... ++..............|+.+.|.|.+.+ +.|.+.|.|++++..+.......
T Consensus 89 Y~C~a~n~~~~~~~~~~~~~v~~~----~~~~~~~~~~~~~~~~~~~~~l~C~~~~-g~P~~~i~W~~~~~~~~~~~~~~ 163 (308)
T 4fom_A 89 YICKAVTFPLGNAQSSTTVTVLVE----PTVSLIKGPDSLIDGGNETVAAICIAAT-GKPVAHIDWEGDLGEMESTTTSF 163 (308)
T ss_dssp EEEEEEETTTEEEEEEEEEEEEBC----CEEEEEECSSCCCTTCSCEEEEEEEEEE-EBSCCEEEECCCSSBCCEEEEEC
T ss_pred EEEEEeeCCCcceeeeeEEEeeec----cccccccccceeEEcCCceEEEEEEecC-CcCCceEEEEECCccccccccee
Confidence 99999885 566677777776642 2222222223333667899999998753 88999999999998875321100
Q ss_pred EE-EeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcc
Q psy2166 355 MV-SDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPV 433 (805)
Q Consensus 355 ~~-~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 433 (805)
.. .......|.|..+..+|+|.|+|.|.|..|.......+.+.
T Consensus 164 ~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~------------------------------------ 207 (308)
T 4fom_A 164 PNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILD------------------------------------ 207 (308)
T ss_dssp TTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC------------------------------------
T ss_pred eeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEE------------------------------------
Confidence 00 00112358999999999999999999988765544443321
Q ss_pred cCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCe
Q psy2166 434 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQS 513 (805)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 513 (805)
+..+|.+.........+.+|+.
T Consensus 208 ----------------------------------------------------------V~~~P~~~~~~~~~~~~~~g~~ 229 (308)
T 4fom_A 208 ----------------------------------------------------------IQYAPEVSVTGYDGNWFVGRKG 229 (308)
T ss_dssp ----------------------------------------------------------CCEEEEECCBCCCSCEETTCCS
T ss_pred ----------------------------------------------------------EecCCeeEEcccceeeeecccc
Confidence 2345555555444444788999
Q ss_pred EEEEEEEeeCCCCCc-EEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeee
Q psy2166 514 AHFEARLTPVTDPDL-VVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 514 v~L~C~v~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 592 (805)
++|.|.+. |.|.| .++|+|+|..+..+... . +...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..+|
T Consensus 230 v~l~C~~~--g~P~p~~v~W~k~~~~~~~~~~~----~-~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 230 VNLKCNAD--ANPPPFKSVWSRLDGQWPDGLLA----S-DNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp CEEECCEE--EESCEEEEECCBSSSCCCSSCBC----S-TTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred EEEEEEEe--cCCCCcEEEEEECCeECCCcEEE----c-CCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 99999999 56777 79999999888654221 1 23457889999999999999999999999999999998877
Q ss_pred e
Q psy2166 593 N 593 (805)
Q Consensus 593 ~ 593 (805)
.
T Consensus 303 ~ 303 (308)
T 4fom_A 303 H 303 (308)
T ss_dssp -
T ss_pred C
Confidence 5
No 77
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.96 E-value=3.7e-28 Score=254.67 Aligned_cols=264 Identities=17% Similarity=0.188 Sum_probs=190.2
Q ss_pred ccCCCceEEEEEEEeeCC-------CCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccE-EEEEEEEcCCe
Q psy2166 214 NLSEGEIAHFEASLIPVG-------DQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTG-VYTCRATNKWG 285 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~-------~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G-~Y~C~~~n~~g 285 (805)
.+.+|+.+.|.|.+.... .|.+.+.|+|+|..+....+. ..+ ..|.|.+++.+|+| .|+|.|.|..|
T Consensus 40 ~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~---~~~--~~L~i~~v~~~D~Gs~Y~C~a~n~~g 114 (329)
T 3oq3_B 40 MAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR---VKN--GDLWIANYTSNDSHRRYLCTVTTKNG 114 (329)
T ss_dssp EECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT---EET--TEEEESSCCGGGGGCCEEEEEECTTS
T ss_pred EEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce---eec--ceEEEcCCChHhCCCcEEEEEEeCCC
Confidence 488999999999874322 367899999999877654432 222 37999999999999 99999999887
Q ss_pred eEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC-CcEEEEEECCEEccC-CCceEEEEeCcEEE
Q psy2166 286 QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP-ELKVEWFHNGKPIFH-KNRVKMVSDFGFVV 363 (805)
Q Consensus 286 ~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p-~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~ 363 (805)
.........+.. .+|.+....... .+.+|+.+.|.|.+. +.| .+.+.|+|++..+.. ..++... +. .
T Consensus 115 ~~~~~~~~~v~~----~~p~~~~~~~~~-~~~~G~~v~L~C~~~--g~p~~~~i~W~k~~~~l~~~~~~~~~~--~~--~ 183 (329)
T 3oq3_B 115 DCVQGIVRSHIR----KPPSCIPETYEL-GTHDKYGIDLYCGIL--YAKHYNNITWYKNNQELIIDGTKYSQS--GQ--N 183 (329)
T ss_dssp CEEEEEEEEEEC----CCCSCEEEEEET-TSSTTTCEEEECCCC--SCCCCCEEEEEETTEECCCSSSSEEEE--TT--E
T ss_pred ceeeEEEEEEEc----CCCcEeccccce-EEeCCCcEEEEeccC--CCCCCceEEEEECCccCCCCCceEecC--CC--E
Confidence 655444434443 234433333222 267899999999987 788 899999999999863 3344333 33 6
Q ss_pred EEEcccCcCCceEEEEEEEeC--ceeeEEE----EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCC
Q psy2166 364 MDIAYVQSHDSGEYVCRAWNK--YGEDFTR----ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAP 437 (805)
Q Consensus 364 l~i~~v~~~d~G~Y~C~a~n~--~g~~~~~----~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (805)
|.|.++..+|+|.|+|.|.|. .|..... +.|.|..++..
T Consensus 184 L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~----------------------------------- 228 (329)
T 3oq3_B 184 LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDH----------------------------------- 228 (329)
T ss_dssp EEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCC-----------------------------------
T ss_pred EEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCC-----------------------------------
Confidence 999999999999999999987 5443333 55665432210
Q ss_pred ceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEE
Q psy2166 438 KFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 517 (805)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~ 517 (805)
.. .++ .+....+.+|+.++|.
T Consensus 229 --------------------------------------------------------~~-~~~--~~~~~~v~~G~~~~l~ 249 (329)
T 3oq3_B 229 --------------------------------------------------------RF-KLI--LDPKINVTIGEPANIT 249 (329)
T ss_dssp --------------------------------------------------------CE-EEE--CCSEEEECTTSCEEEE
T ss_pred --------------------------------------------------------CC-cee--cCCeeEEecCCCEEEE
Confidence 00 111 2222448899999999
Q ss_pred EEEeeCCCC---Cc-EEEEEECCEEc-cCCCceEEE--eeC--CEEEEEEccCCCCCCE-EEEEEEEcCCcceEEEEEEE
Q psy2166 518 ARLTPVTDP---DL-VVEWFYNGKKL-PHGHRYRTF--HDF--GIVILDILYCYEENSG-VYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 518 C~v~~~g~p---~~-~v~W~~~g~~l-~~~~~~~~~--~~~--~~~~L~i~~v~~~d~G-~Y~C~a~n~~g~~~~~~~l~ 587 (805)
|.+.+ .| .+ .+.|+++|..+ ..+.+.... ..+ ....|.|.+++.+|+| .|+|.|.|..|.....+.|.
T Consensus 250 C~~~g--~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~ 327 (329)
T 3oq3_B 250 CTAVS--TSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVV 327 (329)
T ss_dssp EEEEE--TTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEE--CCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEE
Confidence 99995 44 66 99999999985 333332222 122 3567999999999999 99999999999999998887
Q ss_pred Ee
Q psy2166 588 CV 589 (805)
Q Consensus 588 V~ 589 (805)
|.
T Consensus 328 v~ 329 (329)
T 3oq3_B 328 LE 329 (329)
T ss_dssp EC
T ss_pred eC
Confidence 73
No 78
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=3.4e-28 Score=254.95 Aligned_cols=271 Identities=13% Similarity=0.200 Sum_probs=178.1
Q ss_pred ecCCCCceecCCCcEEEEEEEecCCC-CCceEEEEECCEecC---------CCCceEEEec-----CcEEEEEEcccccC
Q psy2166 70 VPLKPEFKLGEAQPLHLEAQVEPKND-PNLKIEWIFNGKPLE---------LGSRFKTTAD-----FGFVTLDLTEVYDR 134 (805)
Q Consensus 70 ~~~~~~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~k~g~~i~---------~~~~~~~~~~-----~~~~~L~I~~~~~~ 134 (805)
...+..+.+.+|+.++|.|.+. +. |.+.|+|+|++..+. ...|+....+ ....+|.|.+++.+
T Consensus 7 ~~~p~~~~v~~G~~v~L~C~~~--~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 7 IQPDKSVSVAAGESAILHCTVT--SLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp ECCCSEEEEETTSCEEECCEES--CCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EcCCCceEEecCCcEEEEEEcc--CcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 3445578999999999999998 44 788999999985432 1125554322 34457999999999
Q ss_pred CCeEEEEEEEeCCeeE-----EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 135 DQGIYTCRAWNLAGET-----FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
|+|.|+|.|.|..+.. .....|.|..++ .+|.+. .+
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p--------------------------------------~~p~i~-~~ 125 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKP--------------------------------------SAPVVS-GP 125 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCC--------------------------------------CCCEEE-CC
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEecC--------------------------------------CCceee-cc
Confidence 9999999999986531 123567776543 234443 11
Q ss_pred ccccccCCCceEEEEEEEeeCCCCC--eEEEEEECCEEccCCCcEEEEE-EcC----eEEEEEcCCCCcccEEEEEEEEc
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQT--MTVEFLYNGKPIEASHRIRTVH-AFG----MVVLEILGTKIEDTGVYTCRATN 282 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~--~~i~W~k~g~~l~~~~~~~~~~-~~~----~~~L~i~~~~~~d~G~Y~C~~~n 282 (805)
. ..+.+|+.+.|.|.+. +.|+ ..+.|+|+|..+.......... .++ ...|.|.....+|+|.|+|.|.|
T Consensus 126 -~-~~~~~g~~~~l~C~~~--g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n 201 (327)
T 2wng_A 126 -A-ARATPQHTVSFTCESH--GFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAH 201 (327)
T ss_dssp -S-SCBCTTCEEEEEEEEE--EEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEEC
T ss_pred -c-cccCCCCEEEEEEEEe--CccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEec
Confidence 2 2478999999999985 4443 3999999999987543221111 111 24688888888889999999999
Q ss_pred CCeeE---EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEccCCCceEEEEe
Q psy2166 283 KWGQA---EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 283 ~~g~~---~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
..+.. ..+..+.+.. ..+|.+...+.. +.+|+.++|.|.+.+ ..|.+ .|.|++||+.+.......+...
T Consensus 202 ~~~~~~~~~~~~~~~~~v---~~~P~i~~~~~~---~~~G~~v~l~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 274 (327)
T 2wng_A 202 VTLQGDPLRGTANLSETI---RVPPTLEVTQQP---VRAENQVNVTCQVRK-FYPQRLQLTWLENGNVSRTETASTVTEN 274 (327)
T ss_dssp TTSCSCCEEEEEEGGGTB---CBCCEEEEEEEC---CSSTTCCEEEEEEEE-EBSSCEEEEEEETTEEEEEEECCSCEEC
T ss_pred cccCCCcccceEEecccc---CCCCEEEEecCC---cCCCCcEEEEEEEcc-ccCCCcEEEEEECCeEccCcccCceEEC
Confidence 87652 3333332221 156766655443 678999999999983 23443 8999999998864321111111
Q ss_pred -Cc----EEEEEEcccCcCCceEEEEEEEeCceeeEEEE
Q psy2166 359 -FG----FVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRA 392 (805)
Q Consensus 359 -~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 392 (805)
++ ...|.|..+..+|+|.|+|.|.|..|......
T Consensus 275 ~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~ 313 (327)
T 2wng_A 275 KDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKS 313 (327)
T ss_dssp TTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEE
T ss_pred CCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhh
Confidence 12 13588999999999999999999998765443
No 79
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=3.8e-28 Score=255.23 Aligned_cols=282 Identities=12% Similarity=0.131 Sum_probs=196.3
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecC--CCCCceEEEEECC--E-------------ec--CCCCceEEE-ecCcE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPK--NDPNLKIEWIFNG--K-------------PL--ELGSRFKTT-ADFGF 123 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~--~~p~~~v~W~k~g--~-------------~i--~~~~~~~~~-~~~~~ 123 (805)
.+|.+.+..+..+.+.+|+.++|.|.+.+. +.+.+.|.|+|++ . .+ ....|+.+. .....
T Consensus 12 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 91 (331)
T 3u83_A 12 RDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTD 91 (331)
T ss_dssp ---------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSB
T ss_pred CCCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCC
Confidence 345556666667899999999999998832 1256689999954 1 11 233566554 12234
Q ss_pred EEEEEcccccCCCeEEEEE-EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCC
Q psy2166 124 VTLDLTEVYDRDQGIYTCR-AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRP 202 (805)
Q Consensus 124 ~~L~I~~~~~~D~G~Y~C~-a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (805)
.+|.|.+++.+|+|.|+|. +.+..|.......|.|..++.+...
T Consensus 92 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~----------------------------------- 136 (331)
T 3u83_A 92 GTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIE----------------------------------- 136 (331)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEE-----------------------------------
T ss_pred ceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceee-----------------------------------
Confidence 4799999999999999998 5566788888888888765432111
Q ss_pred CceecccccccccCCC---ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEE
Q psy2166 203 PQFTSEFQHLSNLSEG---EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGV 275 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g---~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~ 275 (805)
... ....+.+| +.+.|.|.+. .+.|.+.+.|++++....... .....++ ...|.|.++..+|+|.
T Consensus 137 ----~~~-~~~~~~~g~~~~~~~l~C~~~-~~~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~ 208 (331)
T 3u83_A 137 ----GTQ-AVLRAKKGQDDKVLVATCTSA-NGKPPSVVSWETRLKGEAEYQ--EIRNPNGTVTVISRYRLVPSREAHQQS 208 (331)
T ss_dssp ----ECS-SCEEECTTCCCCEEEEEEEEE-EEBSCCEEEEEESSCCEEEEE--EEECTTSCEEEEEEEEECCCGGGTTCE
T ss_pred ----cCC-CceeecCCCccceEEEEEEec-CCcCCceEEEEcCCCCccccc--eeECCCCcEEEEEEEEEEeccccCCCE
Confidence 111 11236677 8899999732 578889999999632211100 0011111 2469999999999999
Q ss_pred EEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcE-EEEEECCEEccCCCceE
Q psy2166 276 YTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELK-VEWFHNGKPIFHKNRVK 354 (805)
Q Consensus 276 Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~-v~W~~~g~~l~~~~~~~ 354 (805)
|+|.|.|..+..+.++.|.|. .+|.+...+.....+.+|+.++|.|.+. +.|.+. +.|++++..+.....
T Consensus 209 Y~C~a~n~~~~~~~~~~l~V~-----~~P~~~~~~~~~~~~~~g~~~~l~C~~~--g~p~p~~i~W~~~~~~~~~~~~-- 279 (331)
T 3u83_A 209 LACIVNYHMDRFKESLTLNVQ-----YEPEVTIEGFDGNWYLQRMDVKLTCKAD--ANPPATEYHWTTLNGSLPKGVE-- 279 (331)
T ss_dssp EEEEEEETTEEEEEEEECCEE-----EEEEEEEECCCSCCBTTCCCEEEEEEEE--EESCCCEEEEEETTBSCCTTEE--
T ss_pred EEEEEecCCCcceeeEEEEEe-----cCCeEEEecCCCceEeCCCeEEEEEeCc--CCCCCCEEEEEECCCcccccce--
Confidence 999999999988888888876 3555554444444488999999999998 778887 999999988864421
Q ss_pred EEEeCcEEEEEEc-ccCcCCceEEEEEEEeCceeeEEEEEEEEEeccc
Q psy2166 355 MVSDFGFVVMDIA-YVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 355 ~~~~~~~~~l~i~-~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 401 (805)
. .+. +|.|. ++..+|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 280 ~--~~~--~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 280 A--QNR--TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp E--ETT--EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC---
T ss_pred e--cCc--EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccch
Confidence 1 223 58899 8999999999999999999999999998876543
No 80
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=2.7e-27 Score=239.61 Aligned_cols=242 Identities=17% Similarity=0.220 Sum_probs=183.4
Q ss_pred CceecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEE
Q psy2166 203 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT 281 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 281 (805)
|.|...+... .+.+|+.+.|.|.+ .+.|.+ .+.|+|+|..+.... ..|.|.+++.+|+|.|+|.+.
T Consensus 2 P~i~~~p~~~-~v~~G~~v~l~C~~--~~~~~~~~~~W~~~g~~~~~~~----------~~l~i~~~~~~d~G~Y~C~~~ 68 (262)
T 3rjd_A 2 AVITLQPPWV-SVFQEETVTLHCEV--LHLPGSSSTQWFLNGTATQTST----------PSYRITSASVNDSGEYRCQRG 68 (262)
T ss_dssp CEEEESSCCS-EEETTCCEEEEEEC--SSCCCTTCEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEES
T ss_pred CeEecCCCcE-EeeCCCeEEEEEEC--CCCCCCceEEEEECCEEeeccC----------CeEEEecCCcccCeEEEEEEe
Confidence 5666666664 47899999999988 667766 999999999886542 269999999999999999999
Q ss_pred cCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcE
Q psy2166 282 NKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 361 (805)
Q Consensus 282 n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 361 (805)
|..+.. .+.+.|. .++. ...+.... +.+|+.+.|.|.+.. +.|.+.+.|+++|..+... .. .
T Consensus 69 ~~~~s~--~~~l~v~-----~~~~-~~~~~~~~-~~~g~~v~l~C~~~~-~~p~~~v~W~~~g~~~~~~------~~--~ 130 (262)
T 3rjd_A 69 LSGRSD--PIQLEIH-----RGWL-LLQVSSRV-FTEGEPLALRCHAWK-DKLVYNVLYYRNGKAFKFF------HW--N 130 (262)
T ss_dssp SSCCCC--CEEEEEE-----CSSE-EEEESCSE-EETTSCEEEEEEEGG-GCCCEEEEEEETTEEEEEE------EE--C
T ss_pred cCCccc--cEEEEEe-----ccce-EecCCCeE-EecCCeEEEEEEccC-CCCCceEEEEECCcccccc------CC--C
Confidence 876554 3455554 2333 22333333 779999999999942 7888999999999887421 11 2
Q ss_pred EEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceee
Q psy2166 362 VVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFIT 441 (805)
Q Consensus 362 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (805)
..|.|.++..+|+|.|+|.|.|..+.....+.|.|...
T Consensus 131 ~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~------------------------------------------ 168 (262)
T 3rjd_A 131 SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKEL------------------------------------------ 168 (262)
T ss_dssp CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECS------------------------------------------
T ss_pred CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccC------------------------------------------
Confidence 25899999999999999999999988877788877532
Q ss_pred eecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEe
Q psy2166 442 QISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLT 521 (805)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~ 521 (805)
..+|.+.... . ..+.+|+.++|.|.+.
T Consensus 169 ---------------------------------------------------~~~p~~~~~~-~-~~~~~g~~~~l~C~~~ 195 (262)
T 3rjd_A 169 ---------------------------------------------------FPAPVLNASV-T-SPLLEGNLVTLSCETK 195 (262)
T ss_dssp ---------------------------------------------------SCCCEEEESS-C-SSEETTCCEEEEEECC
T ss_pred ---------------------------------------------------CCCCeEeecC-c-eeecCCCeEEEEeEcc
Confidence 1234444443 2 2378999999999999
Q ss_pred eCCCCC-c----EEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcce
Q psy2166 522 PVTDPD-L----VVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 580 (805)
Q Consensus 522 ~~g~p~-~----~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 580 (805)
+.|. + .+.|+++|..+... .....|.|.+++.+|+|.|+|.|.|..|..
T Consensus 196 --~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 196 --LLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp --CCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred --cCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 4443 3 47899999977422 233469999999999999999999999975
No 81
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.96 E-value=2.6e-26 Score=247.17 Aligned_cols=339 Identities=16% Similarity=0.187 Sum_probs=227.6
Q ss_pred CeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEEC--CEEccC-----CCceEEEEeCcEEEEEEcccCcCCceE
Q psy2166 304 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHN--GKPIFH-----KNRVKMVSDFGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 304 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~l~~-----~~~~~~~~~~~~~~l~i~~v~~~d~G~ 376 (805)
|.+.. +.+.. +.+|+.++|.|.+. +.|.+.|.|+|+ |..+.. ..++.+..+.....|.|.++..+|+|.
T Consensus 2 P~i~~-~~~~~-~~~G~~v~l~C~~~--g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 77 (389)
T 2jll_A 2 PHIIQ-LKNET-TYENGQVTLVCDAE--GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGR 77 (389)
T ss_dssp CEEEE-CCCEE-EETTSEEEEEEEEE--CSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEE
T ss_pred CeEEe-cCceE-EeCCCeEEEEEEee--cccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEE
Confidence 44444 33333 77899999999998 899999999999 888864 456777666677789999999999999
Q ss_pred EEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEE
Q psy2166 377 YVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAH 456 (805)
Q Consensus 377 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (805)
|+|.|.|..|.....+.|.|..+|
T Consensus 78 Y~C~a~n~~g~~~~~~~l~V~~~P-------------------------------------------------------- 101 (389)
T 2jll_A 78 YDCEAASRIGGHQKSMYLDIEYAP-------------------------------------------------------- 101 (389)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEE--------------------------------------------------------
T ss_pred EEEEEEeCCCCcceEEEEEEEeCC--------------------------------------------------------
Confidence 999999999998888888886433
Q ss_pred EEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECC
Q psy2166 457 FEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNG 536 (805)
Q Consensus 457 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g 536 (805)
.+.... ....+.+|+.++|.|.+. |.|.+.++|+|+|
T Consensus 102 ----------------------------------------~~~~~~-~~~~~~~g~~~~l~C~~~--g~p~~~i~W~~~g 138 (389)
T 2jll_A 102 ----------------------------------------KFISNQ-TIYYSWEGNPINISCDVK--SNPPASIHWRRDK 138 (389)
T ss_dssp ----------------------------------------EECCSC-CEEEECTTCCEEEEECEE--EESCCEEEEEETT
T ss_pred ----------------------------------------EEecCc-ceEEeccCCEEEEEEEEE--ecCCCeEEEEECC
Confidence 222221 122378999999999999 6688999999999
Q ss_pred EEccCCC--ceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeee--------------eecC--
Q psy2166 537 KKLPHGH--RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL--------------ILES-- 598 (805)
Q Consensus 537 ~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~--------------~~~~-- 598 (805)
..+.... ++.+..++....|.|.++..+|+|.|+|.|.|..|.....+.|.+...+.. .+.+
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~ 218 (389)
T 2jll_A 139 LVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNK 218 (389)
T ss_dssp EESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEEC
T ss_pred ccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeC
Confidence 9997653 677776777788999999999999999999999999988888877544321 1111
Q ss_pred C-----CC----eEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccccc
Q psy2166 599 Q-----LP----EVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLIL 669 (805)
Q Consensus 599 ~-----~p----~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~ 669 (805)
| .| .+.|.+++.. ....+...+....|.|.++...+.|.|+|.|.|..|....+..+.+...+.
T Consensus 219 p~~~~g~pi~~y~v~~~~~~~~----~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~--- 291 (389)
T 2jll_A 219 PDSHGGVPIHHYQVDVKEVASE----IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV--- 291 (389)
T ss_dssp CSCCTTSCEEEEEEEEEETTCS----CCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC---
T ss_pred CCCCCCcceEEEEEEEEECCCc----ccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC---
Confidence 0 01 2344443321 111222223334699999999999999999999999876555554443110
Q ss_pred ccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecC-CCCe--EEEEEECCEEccCCCCeEEEee
Q psy2166 670 ESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVG-DQTM--TVEFLYNGKPIEASHRIRTVHA 746 (805)
Q Consensus 670 ~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p~~--~v~W~~~g~~l~~~~~~~~~~~ 746 (805)
. |+ .+|.+.. ....+..+.|....-..+ .|.. .|.|...+.. .........
T Consensus 292 --~-~p--------------~~p~~~~------~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~ 345 (389)
T 2jll_A 292 --R-EP--------------SPPSIHG------QPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE---DQWLEKKVQ 345 (389)
T ss_dssp --C-CC--------------CCCCEEE------EEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEEC
T ss_pred --C-CC--------------CCCcccc------ccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCC---cceeEeecc
Confidence 0 00 3444322 122456677777642111 1222 2333332211 000001112
Q ss_pred CcEEEEEEcCCCCCCCEEEEEEEEcCCccEEE
Q psy2166 747 FGMVVLEILGTKIEDTGVYTCRATNKWGQAEI 778 (805)
Q Consensus 747 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 778 (805)
.....+.|.++.....-.+++.|.|..|....
T Consensus 346 ~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~ 377 (389)
T 2jll_A 346 GNKDHIILEHLQWTMGYEVQITAANRLGYSEP 377 (389)
T ss_dssp TTCCEEEECSCCTTCEEEEEEEEEC-CCBCCC
T ss_pred CCcceEEeCCcCCCCEEEEEEEEEcCCcCCCc
Confidence 22335788999998889999999999996433
No 82
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=250.68 Aligned_cols=274 Identities=13% Similarity=0.171 Sum_probs=175.6
Q ss_pred ceecccccccccCCCceEEEEEEEeeCCC-CCeEEEEEECCEEcc---------CCCcEEEEEE-----cCeEEEEEcCC
Q psy2166 204 QFTSEFQHLSNLSEGEIAHFEASLIPVGD-QTMTVEFLYNGKPIE---------ASHRIRTVHA-----FGMVVLEILGT 268 (805)
Q Consensus 204 ~~~~~~~~~~~v~~g~~~~l~C~~~~~~~-p~~~i~W~k~g~~l~---------~~~~~~~~~~-----~~~~~L~i~~~ 268 (805)
.|...+... .+.+|+.+.|.|.+ .+. |.+.|.|+|++..+. ...++..... .+...|.|.++
T Consensus 5 ~v~~~p~~~-~v~~G~~v~L~C~~--~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 5 QVIQPDKSV-SVAAGESAILHCTV--TSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CEECCCSEE-EEETTSCEEECCEE--SCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred EEEcCCCce-EEecCCcEEEEEEc--cCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 344444443 48899999999998 565 778999999975421 0113332211 33457999999
Q ss_pred CCcccEEEEEEEEcCCeeE-----EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc--EEEEE
Q psy2166 269 KIEDTGVYTCRATNKWGQA-----EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL--KVEWF 341 (805)
Q Consensus 269 ~~~d~G~Y~C~~~n~~g~~-----~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~--~v~W~ 341 (805)
+.+|+|.|+|.+.|..+.. ...+.|.|...+ .+|.+. .+ . ..+.+|+.+.|.|.+. +.|.+ .+.|+
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p--~~p~i~-~~-~-~~~~~g~~~~l~C~~~--g~p~~~~~v~W~ 154 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKP--SAPVVS-GP-A-ARATPQHTVSFTCESH--GFSPRDITLKWF 154 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCC--CCCEEE-CC-S-SCBCTTCEEEEEEEEE--EEBSSCCEEEEE
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecC--CCceee-cc-c-cccCCCCEEEEEEEEe--CccCCCcEEEEE
Confidence 9999999999999976531 134566666532 344444 22 2 3378999999999998 44443 99999
Q ss_pred ECCEEccCCCceEEEE-eCc----EEEEEEcccCcCCceEEEEEEEeCceee-EEEEEEEEEecccccccCCChhHHHHH
Q psy2166 342 HNGKPIFHKNRVKMVS-DFG----FVVMDIAYVQSHDSGEYVCRAWNKYGED-FTRATIKCFGKGGVYLDSLQPESLARI 415 (805)
Q Consensus 342 ~~g~~l~~~~~~~~~~-~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~ 415 (805)
++|+.+.......... .++ ...|.|.....+|.|.|+|.|.|..+.. .......+
T Consensus 155 k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~------------------- 215 (327)
T 2wng_A 155 KNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANL------------------- 215 (327)
T ss_dssp ETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEG-------------------
T ss_pred ECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEe-------------------
Confidence 9999987443211100 111 1247777777777899999999987752 11111111
Q ss_pred HHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCC
Q psy2166 416 RELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEA 495 (805)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 495 (805)
.+.+..+
T Consensus 216 -------------------------------------------------------------------------~~~v~~~ 222 (327)
T 2wng_A 216 -------------------------------------------------------------------------SETIRVP 222 (327)
T ss_dssp -------------------------------------------------------------------------GGTBCBC
T ss_pred -------------------------------------------------------------------------ccccCCC
Confidence 1123567
Q ss_pred CceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCC--ceEEEeeCC---EEEEEEccCCCCCCEEEE
Q psy2166 496 PKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGH--RYRTFHDFG---IVILDILYCYEENSGVYE 570 (805)
Q Consensus 496 P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~---~~~L~i~~v~~~d~G~Y~ 570 (805)
|.+...... +.+|+.++|.|.+.+...|...|+|+|||+.+..+. ++....++. .+.|.|..+..+|+|.|+
T Consensus 223 P~i~~~~~~---~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~ 299 (327)
T 2wng_A 223 PTLEVTQQP---VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLT 299 (327)
T ss_dssp CEEEEEEEC---CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEE
T ss_pred CEEEEecCC---cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEE
Confidence 777765444 789999999999995322333899999999986432 121111221 246899999999999999
Q ss_pred EEEEcCCcceEE
Q psy2166 571 CRATNKYGSDVT 582 (805)
Q Consensus 571 C~a~n~~g~~~~ 582 (805)
|.|.|..|....
T Consensus 300 C~a~N~~~~~~s 311 (327)
T 2wng_A 300 CQVEHDGQPAVS 311 (327)
T ss_dssp EEEEETTCCCEE
T ss_pred EEEEeCCCCCch
Confidence 999999987643
No 83
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=5.5e-28 Score=253.96 Aligned_cols=274 Identities=16% Similarity=0.197 Sum_probs=190.9
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCC----CCeEEEEEECC--EE-------------c--cCCCcEEEE-EEcC
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGD----QTMTVEFLYNG--KP-------------I--EASHRIRTV-HAFG 259 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~----p~~~i~W~k~g--~~-------------l--~~~~~~~~~-~~~~ 259 (805)
+|.+....+....+.+|+.++|.|.+ .+. +.+.+.|+|++ .. + ....++... ...+
T Consensus 13 ~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~ 90 (331)
T 3u83_A 13 DPSQVVQVNDSMYGFIGTDVVLHCSF--ANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFT 90 (331)
T ss_dssp --------CEEEEEETTCCEEECCBC--SSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSS
T ss_pred CCcceEEcCCcEEEEecCCEEEeeec--CCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCC
Confidence 34444333334468899999999987 444 55789999954 11 1 122343332 1223
Q ss_pred eEEEEEcCCCCcccEEEEEE-EEcCCeeEEEEEEEEEeccCCCCCCeEEec-CCCcccccCC---CeEEEEEE-EeecCC
Q psy2166 260 MVVLEILGTKIEDTGVYTCR-ATNKWGQAEISVNLECVDKSKGQPPKFTSH-IKSLEGLKDG---DSAHFECT-LTPVND 333 (805)
Q Consensus 260 ~~~L~i~~~~~~d~G~Y~C~-~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~-~~~~~~~~~g---~~~~l~C~-~~~~~~ 333 (805)
...|.|.+++.+|+|.|+|. +.+..+.....+.|.|.. +|.+... ......+.+| +.+.|.|. .. +.
T Consensus 91 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-----~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~--~~ 163 (331)
T 3u83_A 91 DGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA-----KPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN--GK 163 (331)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB-----CCEEEEEECSSCEEECTTCCCCEEEEEEEEEE--EB
T ss_pred CceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEec-----CCcceeecCCCceeecCCCccceEEEEEEecC--Cc
Confidence 45799999999999999998 556677788888888874 4444322 2233336777 78999998 55 78
Q ss_pred CCcEEEEEECC--EEcc-----CCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccC
Q psy2166 334 PELKVEWFHNG--KPIF-----HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDS 406 (805)
Q Consensus 334 p~~~v~W~~~g--~~l~-----~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~ 406 (805)
|.+.+.|++++ .... ....+.+ ...|.|..+..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 164 p~~~i~W~~~~~~~~~~~~~~~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~-------- 230 (331)
T 3u83_A 164 PPSVVSWETRLKGEAEYQEIRNPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY-------- 230 (331)
T ss_dssp SCCEEEEEESSCCEEEEEEEECTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE--------
T ss_pred CCceEEEEcCCCCccccceeECCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec--------
Confidence 89999999953 2211 1111111 13588999999999999999999999887777777643
Q ss_pred CChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcc
Q psy2166 407 LQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPV 486 (805)
Q Consensus 407 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 486 (805)
T Consensus 231 -------------------------------------------------------------------------------- 230 (331)
T 3u83_A 231 -------------------------------------------------------------------------------- 230 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcE-EEEEECCEEccCCCceEEEeeCCEEEEEEc-cCCCC
Q psy2166 487 AQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLV-VEWFYNGKKLPHGHRYRTFHDFGIVILDIL-YCYEE 564 (805)
Q Consensus 487 ~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~-v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~-~v~~~ 564 (805)
+|.+.........+.+|+.++|.|.+. +.|.|. ++|+++|..+..... ..++ .|.|. ++..+
T Consensus 231 --------~P~~~~~~~~~~~~~~g~~~~l~C~~~--g~p~p~~i~W~~~~~~~~~~~~----~~~~--~L~i~~~v~~~ 294 (331)
T 3u83_A 231 --------EPEVTIEGFDGNWYLQRMDVKLTCKAD--ANPPATEYHWTTLNGSLPKGVE----AQNR--TLFFKGPINYS 294 (331)
T ss_dssp --------EEEEEEECCCSCCBTTCCCEEEEEEEE--EESCCCEEEEEETTBSCCTTEE----EETT--EEEECSCCCGG
T ss_pred --------CCeEEEecCCCceEeCCCeEEEEEeCc--CCCCCCEEEEEECCCcccccce----ecCc--EEEEeCCCccc
Confidence 344444333333488999999999998 567777 999999998865421 1223 59999 89999
Q ss_pred CCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 565 NSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 565 d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
|+|.|+|.|.|..|.....+.|.|...+.
T Consensus 295 d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 295 LAGTYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp GCEEEEEEEEETTEEEEEEEEECCBC---
T ss_pred cCeEEEEEEEeccccceEEEEEEEeccch
Confidence 99999999999999999999999887654
No 84
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=4.9e-28 Score=249.38 Aligned_cols=275 Identities=17% Similarity=0.215 Sum_probs=195.6
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
.+|.+...+ ..+.+.+|+.++|.|.+. +. |.|++++. .++.+..++...+|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~i~~~~-~~~~v~~G~~v~L~C~~~--~~----v~W~~~~~-----~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 70 (292)
T 4dkd_C 3 SIPVIEPSV-PELVVKPGATVTLRCVGN--GS----VEWDGPPS-----PHWTLYSDGSSSILSTNNATFQNTGTYRCTE 70 (292)
T ss_dssp -CCEEESCC-SSCEECTTCCEEEEEECS--SC----CCBCCCCC-----SSCEECCBTTEEEEEESSCCGGGCSCEEECC
T ss_pred CCceecCCC-CeEEEcCCCcEEEEEcCC--Cc----eEEccCCC-----CceEEeccCceEEEEEcccccccCEEEEEEE
Confidence 356665544 477999999999999987 32 99997653 2445555666779999999999999999999
Q ss_pred EeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEE
Q psy2166 144 WNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHF 223 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 223 (805)
.|..|.......|.|..++. .+...+.. ..+.+|+.+.|
T Consensus 71 ~n~~~~~~~~~~l~V~~~~~----------------------------------------~~~~~~~~-~~v~~g~~v~l 109 (292)
T 4dkd_C 71 PGDPLGGSAAIHLYVKDPAR----------------------------------------PWNVLAQE-VVVFEDQDALL 109 (292)
T ss_dssp CC----CCEEECCEECCSSC----------------------------------------CEEESCSE-EEEETTSCEEC
T ss_pred ccCCCCcceEEEEEEcCccc----------------------------------------cccccCCe-EEEcCCCcEEE
Confidence 99887777777777764321 11222222 24779999999
Q ss_pred EEEEeeCCCCC--eEEEEEEC-CEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeE-EEEEEEEEeccC
Q psy2166 224 EASLIPVGDQT--MTVEFLYN-GKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA-EISVNLECVDKS 299 (805)
Q Consensus 224 ~C~~~~~~~p~--~~i~W~k~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~~~ 299 (805)
.|.+ .+ |. +.+.|+++ +..+....++...... .|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|....
T Consensus 110 ~C~~--~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 183 (292)
T 4dkd_C 110 PCLL--TD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVI 183 (292)
T ss_dssp CEEE--SS-GGGGSSEEEEEGGGCCCCSSCCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCC
T ss_pred eeeC--CC-CCcceeEEEEecCCCccccCCcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCC
Confidence 9998 44 43 78999997 6666555554332222 39999999999999999999887755 336777776422
Q ss_pred CCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe--CcEEEEEEcccCcCCceEE
Q psy2166 300 KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD--FGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y 377 (805)
. .+|.+...+.... +.+|+.+.|.|.+.+ ..+.+.+.|++++..+........... .....|.|.++..+|+|.|
T Consensus 184 ~-~~p~i~~~~~~~~-~~~g~~v~l~C~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 260 (292)
T 4dkd_C 184 P-GPPALTLVPAELV-RIRGEAAQIVCSASS-VDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNY 260 (292)
T ss_dssp C-SSCEEEEESSCBC-CCSSSCEEEEEEEEE-SSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEE
T ss_pred C-CCCeEEccCCcee-EecCCCEEEEEEecC-CCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEE
Confidence 1 2677777666554 679999999999984 345578999999887754333222111 1234799999999999999
Q ss_pred EEEEEeCceeeEEEEEEEEEecc
Q psy2166 378 VCRAWNKYGEDFTRATIKCFGKG 400 (805)
Q Consensus 378 ~C~a~n~~g~~~~~~~l~V~~~~ 400 (805)
+|.|.|..|.....+.|.|....
T Consensus 261 ~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 261 SCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEEECSSCEEEEEEEECC----
T ss_pred EEEEecCCCCceeEEEEEEeeCC
Confidence 99999999999999999887543
No 85
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.95 E-value=4.9e-28 Score=249.38 Aligned_cols=276 Identities=17% Similarity=0.226 Sum_probs=198.1
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+... .+.+|+.++|.|.+ .+. +.|++++.. ............|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~i~~~~~~~-~v~~G~~v~L~C~~--~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 70 (292)
T 4dkd_C 3 SIPVIEPSVPEL-VVKPGATVTLRCVG--NGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTE 70 (292)
T ss_dssp -CCEEESCCSSC-EECTTCCEEEEEEC--SSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECC
T ss_pred CCceecCCCCeE-EEcCCCcEEEEEcC--CCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEE
Confidence 568888777665 58999999999987 442 999976532 223333445678999999999999999999
Q ss_pred EcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC--cEEEEEEC-CEEccCCCceEEEE
Q psy2166 281 TNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE--LKVEWFHN-GKPIFHKNRVKMVS 357 (805)
Q Consensus 281 ~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~--~~v~W~~~-g~~l~~~~~~~~~~ 357 (805)
.|..+..+..+.|.|... +..+...+.. ..+.+|+.+.|.|.+. + |. +.+.|+++ +..+....++....
T Consensus 71 ~n~~~~~~~~~~l~V~~~----~~~~~~~~~~-~~v~~g~~v~l~C~~~--~-~~~~~~v~W~~~~~~~~~~~~~~~~~~ 142 (292)
T 4dkd_C 71 PGDPLGGSAAIHLYVKDP----ARPWNVLAQE-VVVFEDQDALLPCLLT--D-PVLEAGVSLVRVRGRPLMRHTNYSFSP 142 (292)
T ss_dssp CC----CCEEECCEECCS----SCCEEESCSE-EEEETTSCEECCEEES--S-GGGGSSEEEEEGGGCCCCSSCCEECCS
T ss_pred ccCCCCcceEEEEEEcCc----cccccccCCe-EEEcCCCcEEEeeeCC--C-CCcceeEEEEecCCCccccCCcccccC
Confidence 998877777888887642 2223333333 3488999999999997 4 43 78999997 66665555554433
Q ss_pred eCcEEEEEEcccCcCCceEEEEEEEeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCC
Q psy2166 358 DFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEA 436 (805)
Q Consensus 358 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (805)
+.. |.|.++..+|+|.|+|.|.|..+.... .+.|.|...
T Consensus 143 ~~~---L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~------------------------------------- 182 (292)
T 4dkd_C 143 WHG---FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKV------------------------------------- 182 (292)
T ss_dssp SSC---CEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECC-------------------------------------
T ss_pred Cce---EEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCC-------------------------------------
Confidence 333 889999999999999999988775544 667776421
Q ss_pred CceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEE
Q psy2166 437 PKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHF 516 (805)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L 516 (805)
...+|.+...+.... +.+|+.++|
T Consensus 183 -------------------------------------------------------~~~~p~i~~~~~~~~-~~~g~~v~l 206 (292)
T 4dkd_C 183 -------------------------------------------------------IPGPPALTLVPAELV-RIRGEAAQI 206 (292)
T ss_dssp -------------------------------------------------------CCSSCEEEEESSCBC-CCSSSCEEE
T ss_pred -------------------------------------------------------CCCCCeEEccCCcee-EecCCCEEE
Confidence 124677776665544 679999999
Q ss_pred EEEEeeCCCCCcEEEEEECCEEccCCCceEEEee--CCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 517 EARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHD--FGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 517 ~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.|.+.+ ..+.+.+.|++++..+........... .....|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.....
T Consensus 207 ~C~~~~-~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 284 (292)
T 4dkd_C 207 VCSASS-VDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAG 284 (292)
T ss_dssp EEEEEE-SSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC-----
T ss_pred EEEecC-CCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCCC
Confidence 999996 356678999999987754433222111 1234799999999999999999999999999999998876543
No 86
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=2.8e-25 Score=239.10 Aligned_cols=270 Identities=19% Similarity=0.184 Sum_probs=201.3
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecCC-----CCceEEEecCcEEEEEEcccccCCCe
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLEL-----GSRFKTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~~-----~~~~~~~~~~~~~~L~I~~~~~~D~G 137 (805)
+|.++. ++ +..+.+|+.++|.|.+. |.|.+.|+|+|+ |..+.. +.++.+..+.+..+|.|.+++.+|+|
T Consensus 1 ~P~i~~-~~-~~~~~~G~~v~l~C~~~--g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G 76 (389)
T 2jll_A 1 QPHIIQ-LK-NETTYENGQVTLVCDAE--GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSG 76 (389)
T ss_dssp CCEEEE-CC-CEEEETTSEEEEEEEEE--CSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCE
T ss_pred CCeEEe-cC-ceEEeCCCeEEEEEEee--cccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCE
Confidence 366665 33 56888999999999999 788999999999 888865 46788877777789999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.|.|..|.....+.|.|..++. |...+.. ..+.+
T Consensus 77 ~Y~C~a~n~~g~~~~~~~l~V~~~P~-----------------------------------------~~~~~~~-~~~~~ 114 (389)
T 2jll_A 77 RYDCEAASRIGGHQKSMYLDIEYAPK-----------------------------------------FISNQTI-YYSWE 114 (389)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEEEEE-----------------------------------------ECCSCCE-EEECT
T ss_pred EEEEEEEeCCCCcceEEEEEEEeCCE-----------------------------------------EecCcce-EEecc
Confidence 99999999999988888898875543 2222111 23679
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCC--cEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEE
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH--RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 295 (805)
|+.+.|.|.+ .+.|.+.+.|+|+|..+.... ++.+........|.|.++..+|+|.|+|.|.|..|.....+.+.+
T Consensus 115 g~~~~l~C~~--~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 192 (389)
T 2jll_A 115 GNPINISCDV--KSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILAL 192 (389)
T ss_dssp TCCEEEEECE--EEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEEE--EecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 9999999988 577889999999999997654 566555556789999999999999999999999999888888777
Q ss_pred eccCCCCCCe-EEecCCCcccccCCCeEEEEEEEee--cCCCCc--EEEEEECCEEccCCCceEEEEeCcEEEEEEcccC
Q psy2166 296 VDKSKGQPPK-FTSHIKSLEGLKDGDSAHFECTLTP--VNDPEL--KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQ 370 (805)
Q Consensus 296 ~~~~~~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~~--~~~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~ 370 (805)
...+ .+|. +... ...+..+.|.|.... .+.|.. .+.|.+++.... ..+........+.|.++.
T Consensus 193 ~~~P--~~P~~~~~~------~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~----~~~~~~~~~~~~~i~~l~ 260 (389)
T 2jll_A 193 ADVP--SSPYGVKII------ELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIW----KIVRSHGVQTMVVLNNLE 260 (389)
T ss_dssp CCCC--CCCEEEEEE------EECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCC----EEEECSTTCSEEEECSCC
T ss_pred cCCC--CCCcceEEe------eccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCccc----EEeeccCCcceEEECCcc
Confidence 5433 2332 1111 223567889887421 122332 577887764211 112222233468899999
Q ss_pred cCCceEEEEEEEeCceeeEEEEEE
Q psy2166 371 SHDSGEYVCRAWNKYGEDFTRATI 394 (805)
Q Consensus 371 ~~d~G~Y~C~a~n~~g~~~~~~~l 394 (805)
..+.|.|+|.|.|..|....+..+
T Consensus 261 ~~~~y~~~v~A~N~~G~~~~s~~~ 284 (389)
T 2jll_A 261 PNTTYEIRVAAVNGKGQGDYSKIE 284 (389)
T ss_dssp TTCEEEEEEEEEESSCBCCCCCCE
T ss_pred CCCEEEEEEEEEcCCccCCCCcce
Confidence 999999999999999876544333
No 87
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=1.1e-27 Score=249.78 Aligned_cols=280 Identities=11% Similarity=0.073 Sum_probs=180.1
Q ss_pred CCCCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 59 PEETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 59 ~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
....+.+|.|...+. ..|.+|++++|.|.+. +. .+.+.|+|+|..+...... ......|.|.+++.+|+|.
T Consensus 18 ~~~~~~~P~i~~~p~--~~v~~G~~v~L~C~~~--~~-~~~~~W~k~g~~~~~~~~~----~~~~~~L~I~~v~~~D~G~ 88 (316)
T 3vh8_G 18 HMGGQDKPFLSAWPS--AVVPRGGHVTLRCHYR--HR-FNNFMLYKEDRIHIPIFHG----RIFQESFNMSPVTTAHAGN 88 (316)
T ss_dssp ------CCEEEEESC--SEEETTSCEEEEEEBT--TB-CCSEEEEESSCSSSCHHHH----CCBSSCEEECSCCGGGCEE
T ss_pred ccCCCCCCEeeccCC--CccCCCCCEEEEEEcc--CC-CceEEEEeCCCccceeecC----CcceEEEEECCCCcccCeE
Confidence 344567888887765 4788999999999998 34 6789999999876532110 1112279999999999999
Q ss_pred EEEEEEeCC-----eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccc
Q psy2166 139 YTCRAWNLA-----GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLS 213 (805)
Q Consensus 139 Y~C~a~n~~-----g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 213 (805)
|+|.|.|.. +.......|.|.... .+|.+...+...
T Consensus 89 Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~--------------------------------------~~p~~~~~~~~~- 129 (316)
T 3vh8_G 89 YTCRGSHPHSPTGWSAPSNPVVIMVTGNH--------------------------------------RKPSLLAHPGPL- 129 (316)
T ss_dssp EEEEEBCSSSSSSBCCCCCCEEEEEECSS--------------------------------------CCCEEEEESCSE-
T ss_pred EEEEEEcCCCCcceecCCCcEEEEEecCC--------------------------------------CCCeEEecCCCc-
Confidence 999998642 223344556664321 235555444332
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEE-EEcCeEEEEEcCCCCcccEEEEEEEEcCCee-----E
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTV-HAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----A 287 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-----~ 287 (805)
+.+|+.++|.|.+ . .+.+.+.|+|+|..+......... .......|.|.+++.+|+|.|+|.|.|..+. .
T Consensus 130 -v~~G~~v~L~C~~--~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~ 205 (316)
T 3vh8_G 130 -VKSGERVILQCWS--D-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAP 205 (316)
T ss_dssp -EETTCCEEEEEEE--S-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCC
T ss_pred -cCCCCeEEEEEcC--C-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCC
Confidence 7799999999987 3 345689999999877533211111 1123468999999999999999999998763 1
Q ss_pred EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE-EeCcEEEEEE
Q psy2166 288 EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV-SDFGFVVMDI 366 (805)
Q Consensus 288 ~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~-~~~~~~~l~i 366 (805)
+..+.|.|.... .+|.+...+.. .+.+|+.++|.|.+. .+.+.+.|+|+|..+......... .......|.|
T Consensus 206 s~~~~l~V~~~~--~~p~i~~~~~~--~v~~G~~v~L~C~~~---~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i 278 (316)
T 3vh8_G 206 SDPLDIVVTGPY--EKPSLSAQPGP--KVQAGESVTLSCSSR---SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPL 278 (316)
T ss_dssp CCCEEEEEECSS--CCCEEEEESCS--CCCTTSCCEEEEEES---SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEEC
T ss_pred CCCEEEEecCCC--CCCeEEeCCCC--eecCCCcEEEEEECC---CCCcEEEEEECCCcCCCceeceeccCCceeEEEEc
Confidence 344555554322 45666655443 378999999999994 477899999999876532111111 1112357999
Q ss_pred cccCcCCceEEEEEEEeCcee-----eEEEEEEEEEec
Q psy2166 367 AYVQSHDSGEYVCRAWNKYGE-----DFTRATIKCFGK 399 (805)
Q Consensus 367 ~~v~~~d~G~Y~C~a~n~~g~-----~~~~~~l~V~~~ 399 (805)
.++. |+|.|+|.|.|..+. .+..+.|.|.++
T Consensus 279 ~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 314 (316)
T 3vh8_G 279 GPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGN 314 (316)
T ss_dssp C-------CEEEEEEEBTTBTTEECCCCCCEEC-----
T ss_pred CCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCC
Confidence 9998 999999999997663 233456666543
No 88
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=4.6e-26 Score=236.24 Aligned_cols=277 Identities=17% Similarity=0.243 Sum_probs=197.6
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC-CceEEEe-cCcEEEEEEcccccCCCeEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG-SRFKTTA-DFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~-~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.+|.|+..+. ++.+.+|+.++|.|.+. +.|.+.|.|+|+|..+... .++.+.. +++..+|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~p~-~~~v~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 3 MAPHFKEELR-NLNVRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCCEEEECCC-CEEECTTCCEEEEEEEE--CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred CCCeeeeccc-ceEEeCCCcEEEEEEEe--CCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence 4688877665 78999999999999998 6888999999999998764 4666543 5667799999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 142 RAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
.|.|..|.......|.|..++.+. .|.+...+... .+.+|+.+
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~p~~~------------------------------------~~~~~~~~~~~-~~~~g~~~ 122 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVEVPAKIH------------------------------------LPKTLEGMGAV-HALRGEVV 122 (305)
T ss_dssp EEEETTEEEEEEEEEEECEEEEEC------------------------------------CCHHHHSSCCE-EEETTCCE
T ss_pred EEEcCCCCccceEEEEEecCCccC------------------------------------CCccccccccE-EecCCCEE
Confidence 999999988888888887654321 12222222222 36789999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcC-CCCcccEEEEEEEEcCCeeEEEEEEEEEeccCC
Q psy2166 222 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG-TKIEDTGVYTCRATNKWGQAEISVNLECVDKSK 300 (805)
Q Consensus 222 ~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~ 300 (805)
.|.|.+ .+.|.+.+.|++++..+....++..........|.|.+ +..+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 123 ~l~C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P- 199 (305)
T 2nzi_A 123 SIKIPF--SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP- 199 (305)
T ss_dssp EEEEEE--EEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC-
T ss_pred EEEEEE--CCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC-
Confidence 999998 57888999999999999887777776666678999999 99999999999999999999999999887644
Q ss_pred CCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEE-CCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEE
Q psy2166 301 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 379 (805)
Q Consensus 301 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 379 (805)
.+|...... ...+..+.|.|......... .+.++. ...+.. ...+..........|.|.++...+.|.|+|
T Consensus 200 -~~p~~~~~~-----~~~~~~v~l~w~~p~~~g~~-~i~~y~v~~~~~~-~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~ 271 (305)
T 2nzi_A 200 -DPPRGVKVS-----DVSRDSVNLTWTEPASDGGS-KITNYIVEKCATT-AERWLRVGQARETRYTVINLFGKTSYQFRV 271 (305)
T ss_dssp -CCCEEEEEE-----SCCSSCEEEEEECCSCCSBS-CEEEEEEEEEETT-SCCEEEEEEESSSEEEECSCCSSCEEEEEE
T ss_pred -CCCCCceee-----eccCCEEEEEEcCCccCCCC-ceeEEEEEEecCC-CCccEECccccCceEEecCCCCCCeEEEEE
Confidence 233321110 12355566666542000001 111111 111111 111111111112258899999999999999
Q ss_pred EEEeCceeeEEE
Q psy2166 380 RAWNKYGEDFTR 391 (805)
Q Consensus 380 ~a~n~~g~~~~~ 391 (805)
.|.|..|....+
T Consensus 272 ~A~N~~G~~~~S 283 (305)
T 2nzi_A 272 IAENKFGLSKPS 283 (305)
T ss_dssp EEEETTEECCCC
T ss_pred EEEeCCcccCCc
Confidence 999999976544
No 89
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=4.4e-27 Score=238.22 Aligned_cols=238 Identities=14% Similarity=0.153 Sum_probs=175.1
Q ss_pred ccCCCceEEEEEEEeeCC-CCCe--EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCC---CCcccEE--EEEEEEcCCe
Q psy2166 214 NLSEGEIAHFEASLIPVG-DQTM--TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGT---KIEDTGV--YTCRATNKWG 285 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~-~p~~--~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~---~~~d~G~--Y~C~~~n~~g 285 (805)
.+.+|+.++|.|.+ .+ .|.+ ++.|+|+|..+.. .....++ .|.+... +.+|+|. |+|.+.|..+
T Consensus 14 ~v~~G~~v~l~C~~--~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~ 85 (265)
T 2oz4_A 14 VLEVDTQGTVVCSL--DGLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQ 85 (265)
T ss_dssp EEETTEEEEEEEEE--ESCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTE
T ss_pred eEecCCCEEEEEEc--cCCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCC
Confidence 37899999999998 45 6666 9999999998865 2222222 3444433 7788884 9999999999
Q ss_pred eEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEE
Q psy2166 286 QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 365 (805)
Q Consensus 286 ~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~ 365 (805)
..+..+.|.|... .+|.+.. .... +.+|+.++|.|.+ . |.+.++| +|..+.... ....|.
T Consensus 86 ~~~~~~~l~V~~~---p~p~~~~--~~~~-v~~G~~v~l~C~~---~-p~~~i~W--~g~~~~~~~--------~~~~l~ 145 (265)
T 2oz4_A 86 SQETLQTVTIYSF---PAPNVIL--TKPE-VSEGTEVTVKCEA---H-PRAKVTL--NGVPAQPLG--------PRAQLL 145 (265)
T ss_dssp EEEEEEEEEEECC---CCCEEEE--SCSE-EETTCEEEEEEEC---C-TTSEEEE--SSCSSSCCS--------SEECCE
T ss_pred CcEEEEEEEEeCC---CCceeec--CCce-ecCCCcEEEEEEc---c-CCCEEEE--CCEEccCCC--------CcEEEE
Confidence 9888888988753 2344443 2333 7789999999998 3 8899999 888774322 234588
Q ss_pred EcccCcCCceEEEEEEEeCc-eeeE---EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceee
Q psy2166 366 IAYVQSHDSGEYVCRAWNKY-GEDF---TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFIT 441 (805)
Q Consensus 366 i~~v~~~d~G~Y~C~a~n~~-g~~~---~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (805)
|..+..+|+|.|+|.|.|.. |... ..+.|.|..+|
T Consensus 146 i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p----------------------------------------- 184 (265)
T 2oz4_A 146 LKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGP----------------------------------------- 184 (265)
T ss_dssp EECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEE-----------------------------------------
T ss_pred EccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCC-----------------------------------------
Confidence 89999999999999998644 6554 55667765433
Q ss_pred eecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecC-CCcccccCCCeEEEEEEE
Q psy2166 442 QISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQI-SDVTQLKEGQSAHFEARL 520 (805)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~v~~G~~v~L~C~v 520 (805)
.+.... +....+.+|+.++|.|.+
T Consensus 185 -------------------------------------------------------~~~~~~~p~~~~v~~g~~~~l~C~~ 209 (265)
T 2oz4_A 185 -------------------------------------------------------RLDERDCPGNWTWPENSQQTPMCQA 209 (265)
T ss_dssp -------------------------------------------------------ECCGGGSCSEEEEETTCEECCCCCC
T ss_pred -------------------------------------------------------ccccccCCCccEEcCCCeEEEEeEC
Confidence 222111 222347899999999999
Q ss_pred eeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 521 TPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 521 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
. |.|.|.++|+|+|..+.... . | ..++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 210 ~--g~P~p~i~W~~~~~~~~~~g--------~---~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 210 W--GNPLPELKCLKDGTFPLPIG--------E---S--VTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp E--EESCCEEEEEETTTEECCTT--------S---C--EECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred c--cCCCCeEEEEECCcccCCCC--------c---E--EEeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 8 67889999999997332221 1 1 23678999999999999999999999999875
No 90
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=237.72 Aligned_cols=259 Identities=15% Similarity=0.129 Sum_probs=173.5
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC-eEEEEEcCCCCcccEEEEEEEEcCCee---EEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG-MVVLEILGTKIEDTGVYTCRATNKWGQ---AEI 289 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~g~---~~~ 289 (805)
.+.+|+.++|.|.+ .+. +.|+|++..+.. +......+. ...|.|.+++.+|+|.|+|.|.|..|. ...
T Consensus 11 ~v~~G~~v~L~C~~--~~~----v~W~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (289)
T 3mjg_X 11 VLNVSSTFVLTCSG--SAP----VVWERMSQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERK 82 (289)
T ss_dssp ECCTTCCEEEEEEE--SSC----CEEEBTTBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCE
T ss_pred EEeCCCcEEEEEec--cce----EEEECCCCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEE
Confidence 48899999999988 443 999999988731 221111111 468999999999999999999998765 234
Q ss_pred EEEEEEeccCCCCCCeEEecCCC-cccccCCCeEEEEEEEeecCCCCcEEEEEECC--EEccCCCceEEEEeCcEEEEEE
Q psy2166 290 SVNLECVDKSKGQPPKFTSHIKS-LEGLKDGDSAHFECTLTPVNDPELKVEWFHNG--KPIFHKNRVKMVSDFGFVVMDI 366 (805)
Q Consensus 290 ~~~l~v~~~~~~~~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~l~~~~~~~~~~~~~~~~l~i 366 (805)
++.+.|... ..+.+...... ...+.+|+.+.|.|.+. .|.+.++|++++ ..+. ..+ ..... +.
T Consensus 83 ~~~v~v~~p---~~~~~~~~~~~~~~~v~~G~~v~l~C~~~---~p~~~v~w~~~~~~~~~~--~~~---~~~~~--~~- 148 (289)
T 3mjg_X 83 RLYIFVPDP---TVGFLPNDAEELFIFLTEITEITIPCRVT---DPQLVVTLHEKKGDVALP--VPY---DHQRG--FS- 148 (289)
T ss_dssp EEEEECCCT---TCCBCCCCHHHHEEEESSCCCEEECCCBS---CTTSCEEEEESSCCSCCC--CCE---ETTTE--EE-
T ss_pred eEEEEEECC---CcCcccCCCCcceEEeecCCeEEEEeEcC---CCCceEEEEeCCCCCccc--eee---cCCcC--ee-
Confidence 444444321 11111111110 12378999999999984 566788888864 3332 111 11111 11
Q ss_pred cccCcCCceEEEEEEEeCceeeEEE-EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecc
Q psy2166 367 AYVQSHDSGEYVCRAWNKYGEDFTR-ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISD 445 (805)
Q Consensus 367 ~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (805)
...|+|.|+|.|.|..+..... ..+.|..
T Consensus 149 ---~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~----------------------------------------------- 178 (289)
T 3mjg_X 149 ---GIFEDRSYICKTTIGDREVDSDAYYVYRLQ----------------------------------------------- 178 (289)
T ss_dssp ---ECCCSSEEEEEEEETTEEEECCCEEEEECC-----------------------------------------------
T ss_pred ---eeccCcEEEEEEEeCCceeeeeeEEEEecC-----------------------------------------------
Confidence 3679999999999887665443 4444421
Q ss_pred eeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCC
Q psy2166 446 VTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTD 525 (805)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~ 525 (805)
..+|.+...+.... +.+|++++|.|.+. |.
T Consensus 179 -----------------------------------------------~~~p~i~~~~~~~~-v~~G~~v~L~C~~~--g~ 208 (289)
T 3mjg_X 179 -----------------------------------------------VSSINVSVNAVQTV-VRQGENITLMCIVI--GN 208 (289)
T ss_dssp -----------------------------------------------CCCCCCEEEESCSE-EETTSCEEEEEEEE--SC
T ss_pred -----------------------------------------------CCCCCcEEeCCcce-eEcCCCEEEEEEEC--CC
Confidence 13566666555543 89999999999999 78
Q ss_pred CCcEEEEEECCEEccCCCceEE-Ee----eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeee
Q psy2166 526 PDLVVEWFYNGKKLPHGHRYRT-FH----DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL 594 (805)
Q Consensus 526 p~~~v~W~~~g~~l~~~~~~~~-~~----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 594 (805)
|.+.|+|+++++.+........ .. ......|.|.+++.+|+|.|+|.|.|..|....++.|.|...+..
T Consensus 209 p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 209 EVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp SSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC--
T ss_pred CCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEecC
Confidence 9999999998876543222211 11 123567999999999999999999999999999999999887763
No 91
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=3.3e-27 Score=245.98 Aligned_cols=276 Identities=11% Similarity=0.073 Sum_probs=180.6
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+.. .+.+|+.++|.|.+ .+. .+.+.|+|+|..+..... .......|.|.+++.+|+|.|+|.|
T Consensus 23 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~~-~~~~~W~k~g~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a 93 (316)
T 3vh8_G 23 DKPFLSAWPSA--VVPRGGHVTLRCHY--RHR-FNNFMLYKEDRIHIPIFH----GRIFQESFNMSPVTTAHAGNYTCRG 93 (316)
T ss_dssp -CCEEEEESCS--EEETTSCEEEEEEB--TTB-CCSEEEEESSCSSSCHHH----HCCBSSCEEECSCCGGGCEEEEEEE
T ss_pred CCCEeeccCCC--ccCCCCCEEEEEEc--cCC-CceEEEEeCCCccceeec----CCcceEEEEECCCCcccCeEEEEEE
Confidence 56888877763 47899999999998 454 578999999987643211 0112346999999999999999999
Q ss_pred EcCC-----eeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEE
Q psy2166 281 TNKW-----GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKM 355 (805)
Q Consensus 281 ~n~~-----g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~ 355 (805)
.|.. +..+..+.|.|.... .+|.+...+... +.+|+.++|.|.+. .+.+.+.|+++|..+........
T Consensus 94 ~~~~~~~~~~~~s~~~~l~V~~~~--~~p~~~~~~~~~--v~~G~~v~L~C~~~---~~~~~~~w~k~g~~~~~~~~~~~ 166 (316)
T 3vh8_G 94 SHPHSPTGWSAPSNPVVIMVTGNH--RKPSLLAHPGPL--VKSGERVILQCWSD---IMFEHFFLHKEGISKDPSRLVGQ 166 (316)
T ss_dssp BCSSSSSSBCCCCCCEEEEEECSS--CCCEEEEESCSE--EETTCCEEEEEEES---SCCSEEEEEETTCCSCCEEEECE
T ss_pred EcCCCCcceecCCCcEEEEEecCC--CCCeEEecCCCc--cCCCCeEEEEEcCC---CCCcEEEEEECCCccccceeeee
Confidence 8632 223445566665422 356665544433 78999999999983 45678999999987753221111
Q ss_pred EE-eCcEEEEEEcccCcCCceEEEEEEEeCceee-----EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccc
Q psy2166 356 VS-DFGFVVMDIAYVQSHDSGEYVCRAWNKYGED-----FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQ 429 (805)
Q Consensus 356 ~~-~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 429 (805)
.. ......|.|.++..+|+|.|+|.|.|..|.. .....|.|...
T Consensus 167 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~------------------------------ 216 (316)
T 3vh8_G 167 IHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGP------------------------------ 216 (316)
T ss_dssp EETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECS------------------------------
T ss_pred ecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCC------------------------------
Confidence 11 1233469999999999999999999987742 33345555321
Q ss_pred cCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCccccc
Q psy2166 430 AAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLK 509 (805)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 509 (805)
..+|.+...+.. .+.
T Consensus 217 ---------------------------------------------------------------~~~p~i~~~~~~--~v~ 231 (316)
T 3vh8_G 217 ---------------------------------------------------------------YEKPSLSAQPGP--KVQ 231 (316)
T ss_dssp ---------------------------------------------------------------SCCCEEEEESCS--CCC
T ss_pred ---------------------------------------------------------------CCCCeEEeCCCC--eec
Confidence 244555554433 378
Q ss_pred CCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEee-CCEEEEEEccCCCCCCEEEEEEEEcCCcc-----eEEE
Q psy2166 510 EGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHD-FGIVILDILYCYEENSGVYECRATNKYGS-----DVTK 583 (805)
Q Consensus 510 ~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-----~~~~ 583 (805)
+|++++|.|.+. .|.+.|.|+|+|..+........... .....|.|.+++ |+|.|+|.|.|..+. .+..
T Consensus 232 ~G~~v~L~C~~~---~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~ 306 (316)
T 3vh8_G 232 AGESVTLSCSSR---SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDP 306 (316)
T ss_dssp TTSCCEEEEEES---SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCC
T ss_pred CCCcEEEEEECC---CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCc
Confidence 999999999996 36689999999987753221111111 223579999998 999999999997764 3445
Q ss_pred EEEEEeeee
Q psy2166 584 ASLKCVSKT 592 (805)
Q Consensus 584 ~~l~V~~~~ 592 (805)
+.|.|..+|
T Consensus 307 ~~l~V~g~p 315 (316)
T 3vh8_G 307 LLVSVTGNP 315 (316)
T ss_dssp EEC------
T ss_pred EEEEEeCCC
Confidence 666665443
No 92
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.3e-26 Score=236.37 Aligned_cols=267 Identities=13% Similarity=0.128 Sum_probs=176.8
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCc-EEEEEEcccccCCCeEEEEEEEeCCeeE
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFG-FVTLDLTEVYDRDQGIYTCRAWNLAGET 150 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~-~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 150 (805)
..+.+.|.+|+.++|.|.+. +. |+|+|++..+. .++....++. ..+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~--~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~ 77 (289)
T 3mjg_X 6 PGPELVLNVSSTFVLTCSGS--AP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLE 77 (289)
T ss_dssp SCSEEECCTTCCEEEEEEES--SC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-----
T ss_pred CCCeEEEeCCCcEEEEEecc--ce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCC
Confidence 33467899999999999998 33 99999998874 2333333332 4689999999999999999999987662
Q ss_pred -EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc-cccccCCCceEEEEEEEe
Q psy2166 151 -FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ-HLSNLSEGEIAHFEASLI 228 (805)
Q Consensus 151 -~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~ 228 (805)
.....+.|.++.. ..|.+...+. ....+.+|+.+.|.|.+
T Consensus 78 ~~~~~~~~v~v~~p-------------------------------------~~~~~~~~~~~~~~~v~~G~~v~l~C~~- 119 (289)
T 3mjg_X 78 TDERKRLYIFVPDP-------------------------------------TVGFLPNDAEELFIFLTEITEITIPCRV- 119 (289)
T ss_dssp -CCCEEEEEECCCT-------------------------------------TCCBCCCCHHHHEEEESSCCCEEECCCB-
T ss_pred cCcEEeEEEEEECC-------------------------------------CcCcccCCCCcceEEeecCCeEEEEeEc-
Confidence 2233444433210 0011111100 01247899999999988
Q ss_pred eCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE-EEEEEEEeccCCCCCCeEE
Q psy2166 229 PVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLECVDKSKGQPPKFT 307 (805)
Q Consensus 229 ~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~~~~~~~p~~~ 307 (805)
. .|.+.+.|++++........+ ......+ ..+|+|.|+|.|.|..+... ....+.+... .+|.+.
T Consensus 120 -~-~p~~~v~w~~~~~~~~~~~~~----~~~~~~~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~---~~p~i~ 185 (289)
T 3mjg_X 120 -T-DPQLVVTLHEKKGDVALPVPY----DHQRGFS-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV---SSINVS 185 (289)
T ss_dssp -S-CTTSCEEEEESSCCSCCCCCE----ETTTEEE-----ECCCSSEEEEEEEETTEEEECCCEEEEECCC---CCCCCE
T ss_pred -C-CCCceEEEEeCCCCCccceee----cCCcCee-----eeccCcEEEEEEEeCCceeeeeeEEEEecCC---CCCCcE
Confidence 3 566788888865322221111 1111111 35799999999998766543 3345555432 355565
Q ss_pred ecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEE-----eCcEEEEEEcccCcCCceEEEEEEE
Q psy2166 308 SHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS-----DFGFVVMDIAYVQSHDSGEYVCRAW 382 (805)
Q Consensus 308 ~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~a~ 382 (805)
..+.... +.+|+.++|.|.+. +.|.+.+.|+++++............ ......|.|.++..+|+|.|+|.|.
T Consensus 186 ~~~~~~~-v~~G~~v~L~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 262 (289)
T 3mjg_X 186 VNAVQTV-VRQGENITLMCIVI--GNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVT 262 (289)
T ss_dssp EEESCSE-EETTSCEEEEEEEE--SCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEE
T ss_pred EeCCcce-eEcCCCEEEEEEEC--CCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEee
Confidence 5555544 88999999999998 89999999998876554322211111 1234579999999999999999999
Q ss_pred eCceeeEEEEEEEEEeccc
Q psy2166 383 NKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 383 n~~g~~~~~~~l~V~~~~~ 401 (805)
|..|....++.|.|...+.
T Consensus 263 N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 263 ESVNDHQDEKAINITVVES 281 (289)
T ss_dssp ETTTTEEEEEEEEEEEEC-
T ss_pred cCCCCceeEEEEEEEEEec
Confidence 9999999999999987654
No 93
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=3.1e-26 Score=231.99 Aligned_cols=239 Identities=16% Similarity=0.178 Sum_probs=176.3
Q ss_pred eecCCCcEEEEEEEecCCCCCc--eEEEEECCEecCCCCceEEEecCcEEEEEEccc---ccCCCeE--EEEEEEeCCee
Q psy2166 77 KLGEAQPLHLEAQVEPKNDPNL--KIEWIFNGKPLELGSRFKTTADFGFVTLDLTEV---YDRDQGI--YTCRAWNLAGE 149 (805)
Q Consensus 77 ~v~~G~~v~L~C~~~~~~~p~~--~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~---~~~D~G~--Y~C~a~n~~g~ 149 (805)
.+.+|+.++|.|.+.+ ..|.+ .|+|+|||..+.. .+..++. .|.|..+ +.+|+|. |+|.+.|..|.
T Consensus 14 ~v~~G~~v~l~C~~~g-~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~ 86 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDG-LFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQS 86 (265)
T ss_dssp EEETTEEEEEEEEEES-CSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEE
T ss_pred eEecCCCEEEEEEccC-CCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCC
Confidence 7899999999999983 16665 9999999998875 2333333 3444444 7788885 99999999998
Q ss_pred EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEee
Q psy2166 150 TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIP 229 (805)
Q Consensus 150 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~ 229 (805)
......|.|...+ +|.+.. ... .+.+|+.++|.|.+
T Consensus 87 ~~~~~~l~V~~~p---------------------------------------~p~~~~--~~~-~v~~G~~v~l~C~~-- 122 (265)
T 2oz4_A 87 QETLQTVTIYSFP---------------------------------------APNVIL--TKP-EVSEGTEVTVKCEA-- 122 (265)
T ss_dssp EEEEEEEEEECCC---------------------------------------CCEEEE--SCS-EEETTCEEEEEEEC--
T ss_pred cEEEEEEEEeCCC---------------------------------------Cceeec--CCc-eecCCCcEEEEEEc--
Confidence 8888888886532 133332 222 36789999999987
Q ss_pred CCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC-eeEE---EEEEEEEeccCCCCCCe
Q psy2166 230 VGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW-GQAE---ISVNLECVDKSKGQPPK 305 (805)
Q Consensus 230 ~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~-g~~~---~~~~l~v~~~~~~~~p~ 305 (805)
. |.+.+.| +|..+.... ....|.|..+..+|+|.|+|.|.|.. |... ..+.|.|.. +|.
T Consensus 123 ~--p~~~i~W--~g~~~~~~~--------~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~-----~p~ 185 (265)
T 2oz4_A 123 H--PRAKVTL--NGVPAQPLG--------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY-----GPR 185 (265)
T ss_dssp C--TTSEEEE--SSCSSSCCS--------SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEE-----EEE
T ss_pred c--CCCEEEE--CCEEccCCC--------CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEe-----CCc
Confidence 3 7899999 888774322 23468899999999999999998543 5544 666777763 344
Q ss_pred EEecC-CCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeC
Q psy2166 306 FTSHI-KSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNK 384 (805)
Q Consensus 306 ~~~~~-~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~ 384 (805)
+.... .....+.+|+.++|.|.+. |.|.+.+.|+|+|..+.... . + ..+..+|+|.|+|.|.|.
T Consensus 186 ~~~~~~p~~~~v~~g~~~~l~C~~~--g~P~p~i~W~~~~~~~~~~g--------~---~--~~v~~~d~G~Y~C~a~N~ 250 (265)
T 2oz4_A 186 LDERDCPGNWTWPENSQQTPMCQAW--GNPLPELKCLKDGTFPLPIG--------E---S--VTVTRDLEGTYLCRARST 250 (265)
T ss_dssp CCGGGSCSEEEEETTCEECCCCCCE--EESCCEEEEEETTTEECCTT--------S---C--EECCGGGCEEEEEEEEET
T ss_pred cccccCCCccEEcCCCeEEEEeECc--cCCCCeEEEEECCcccCCCC--------c---E--EEeehhhCeEEEEEEECC
Confidence 43322 1222478899999999997 88999999999987332221 1 1 237789999999999999
Q ss_pred ceeeEEEEEEEEEe
Q psy2166 385 YGEDFTRATIKCFG 398 (805)
Q Consensus 385 ~g~~~~~~~l~V~~ 398 (805)
.|.....+.|.|..
T Consensus 251 ~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 251 QGEVTREVTVNVLS 264 (265)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEec
Confidence 99999999998863
No 94
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.94 E-value=1e-25 Score=233.64 Aligned_cols=194 Identities=22% Similarity=0.305 Sum_probs=156.5
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCC-CcEEEEE-EcCeEEEEEcCCCCcccEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS-HRIRTVH-AFGMVVLEILGTKIEDTGVYTC 278 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~-~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C 278 (805)
.||.|...+.+. .+.+|+.++|.|.+ .+.|.+.+.|+|+|..+... .++.... .++...|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~p~~~-~v~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 3 MAPHFKEELRNL-NVRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCCEEEECCCCE-EECTTCCEEEEEEE--ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred CCCeeeecccce-EEeCCCcEEEEEEE--eCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence 578888888765 58999999999998 68888999999999998754 3454433 3456799999999999999999
Q ss_pred EEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe
Q psy2166 279 RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 279 ~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
.|.|..|.....+.|.|...+....|.....+... .+.+|+.+.|.|.+. +.|.+.+.|++++..+....++.+...
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAV-HALRGEVVSIKIPFS--GKPDPVITWQKGQDLIDNNGHYQVIVT 156 (305)
T ss_dssp EEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCE-EEETTCCEEEEEEEE--EESCCEEEEEESSSBCCSSSSCEEEEC
T ss_pred EEEcCCCCccceEEEEEecCCccCCCccccccccE-EecCCCEEEEEEEEC--CCCCCEEEEEECCEECCCCCcEEEEEc
Confidence 99999998888888888643211112111111222 377899999999998 788899999999999988778877776
Q ss_pred CcEEEEEEcc-cCcCCceEEEEEEEeCceeeEEEEEEEEEecc
Q psy2166 359 FGFVVMDIAY-VQSHDSGEYVCRAWNKYGEDFTRATIKCFGKG 400 (805)
Q Consensus 359 ~~~~~l~i~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 400 (805)
.....|.|.+ +..+|.|.|+|.|.|..|.....+.|.|...|
T Consensus 157 ~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P 199 (305)
T 2nzi_A 157 RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP 199 (305)
T ss_dssp SSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred CCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC
Confidence 6777899999 99999999999999999999998888886543
No 95
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=1.4e-25 Score=215.49 Aligned_cols=190 Identities=28% Similarity=0.415 Sum_probs=149.3
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCC--ceEEEeeCCEEEEEEccCCCCCCEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGH--RYRTFHDFGIVILDILYCYEENSGVYE 570 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 570 (805)
..+|.|...+.... +.+|++++|.|.+. +.|.+.++|+|+|..+.... ++.+...++...|.|.+++.+|+|.|+
T Consensus 3 ~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 3 TQAPTFTQPLQSVV-VLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp CEEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCCCeEEccCCceE-EECCCEEEEEEEEE--ecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEE
Confidence 35678887766654 89999999999998 66888999999999886553 455555555566777777777777777
Q ss_pred EEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCC
Q psy2166 571 CRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650 (805)
Q Consensus 571 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 650 (805)
|.|.|..|.....+.|.|...
T Consensus 80 C~~~n~~~~~~~~~~l~v~~~----------------------------------------------------------- 100 (194)
T 2a38_A 80 LKATNGSGQATSTAELLVKAE----------------------------------------------------------- 100 (194)
T ss_dssp EEEEETTEEEEEEEEEEEECC-----------------------------------------------------------
T ss_pred EEEEcCCceEeEEEEEEEccC-----------------------------------------------------------
Confidence 777666665554444444321
Q ss_pred cceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEE
Q psy2166 651 GSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY 730 (805)
Q Consensus 651 g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~ 730 (805)
+ .+|.+...+... .+.+|+.+.|.|.+. |.|.|.++|+|
T Consensus 101 --------------~------------------------~~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~~~v~W~~ 139 (194)
T 2a38_A 101 --------------T------------------------APPNFVQRLQSM-TVRQGSQVRLQVRVT--GIPTPVVKFYR 139 (194)
T ss_dssp --------------C------------------------EEEEEEECCCCE-EECTTEEEEEEEEEE--EESCCEEEEEE
T ss_pred --------------C------------------------CCCEEEeCCccE-EEcCCCEEEEEEEEE--EecCCeEEEEE
Confidence 0 234444445555 789999999999998 89999999999
Q ss_pred CCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 731 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 731 ~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
+|..+..+.++.+..++....|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 140 DGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp TTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9999999989988888888899999999999999999999999999999999884
No 96
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.94 E-value=1.5e-25 Score=234.13 Aligned_cols=282 Identities=15% Similarity=0.123 Sum_probs=178.9
Q ss_pred CCCceecccccccccCC-CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE-EEEEEcC----eEEEEEcCCCCcccE
Q psy2166 201 RPPQFTSEFQHLSNLSE-GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI-RTVHAFG----MVVLEILGTKIEDTG 274 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~-g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~-~~~~~~~----~~~L~i~~~~~~d~G 274 (805)
.+|.+...++....+.. |+.+.|.|.+.....+.+.|.|+|+|..+...... .....++ .+.|.|.+...+|+|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 85 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDR 85 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTC
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCC
Confidence 45666655444332333 26999999985322235899999999998754322 1122233 246888888888999
Q ss_pred EEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc---EEEEEECC-EEccCC
Q psy2166 275 VYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL---KVEWFHNG-KPIFHK 350 (805)
Q Consensus 275 ~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~---~v~W~~~g-~~l~~~ 350 (805)
.|+|.|.|..+.....+.+.+.. ....|.+...+.....+.+|+.++|.|.+.+ ..|.+ .|.|++++ ..+...
T Consensus 86 ~Y~C~a~n~~~~~~~~~~~~~~~--~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g-~~P~p~~~~i~W~k~~g~~~~~~ 162 (323)
T 2wqr_A 86 TYTCQVTYQGHTFEDSTKKCADS--NPRGVSAYLSRPSPFDLFIRKSPTITCLVVD-LAPSKGTVQLTWSRASGKPVNHS 162 (323)
T ss_dssp CEEEEEEETTEEEEEEECCCCCS--SGGGCEEEECCCCHHHHHTSSCCEEEEEEEE-ECCCSSCCEEEEEETTCCCCCCC
T ss_pred cEEEEEEeCCCCcceeeecCCCC--CCCCCEEEEcCCCHHHhccCCeEEEEEEEec-cCCCCCceEEEEEECCCcccccc
Confidence 99999999887655443321110 1123334333333333788999999999984 34555 99999964 554332
Q ss_pred CceEEEEeC----cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCC
Q psy2166 351 NRVKMVSDF----GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQP 426 (805)
Q Consensus 351 ~~~~~~~~~----~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 426 (805)
......... ....|.|.++..+|+|.|+|.|.|..+... ..+.|...
T Consensus 163 ~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~--~~~~v~~~--------------------------- 213 (323)
T 2wqr_A 163 TRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRA--LMRSTTKT--------------------------- 213 (323)
T ss_dssp CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC--EEEEECCC---------------------------
T ss_pred cCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCC--eeeEEEcc---------------------------
Confidence 221111111 233699999999999999999999864322 22333100
Q ss_pred ccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcc
Q psy2166 427 VAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVT 506 (805)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 506 (805)
.....+|.+........
T Consensus 214 ---------------------------------------------------------------~~~~~~P~v~~~~~~~~ 230 (323)
T 2wqr_A 214 ---------------------------------------------------------------SGPRAAPEVYAFATPEW 230 (323)
T ss_dssp ---------------------------------------------------------------CSCCBCCEEEEEECCCC
T ss_pred ---------------------------------------------------------------CCCCCCCEEEEeCCChH
Confidence 00135676665443322
Q ss_pred cccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE----EeeCC----EEEEEEccCCCCCCEEEEEEEEcCCc
Q psy2166 507 QLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT----FHDFG----IVILDILYCYEENSGVYECRATNKYG 578 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~----~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g 578 (805)
...|+.++|.|.+.+...+.+.|+|+|||+.|..+. +.. ...++ .+.|.|..+..+|+|.|+|.|.|..+
T Consensus 231 -~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 308 (323)
T 2wqr_A 231 -PGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAA 308 (323)
T ss_dssp -TTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTS
T ss_pred -HhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCC
Confidence 234999999999995323345999999999986542 211 11121 34699999999999999999999887
Q ss_pred c
Q psy2166 579 S 579 (805)
Q Consensus 579 ~ 579 (805)
.
T Consensus 309 ~ 309 (323)
T 2wqr_A 309 S 309 (323)
T ss_dssp T
T ss_pred C
Confidence 6
No 97
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.93 E-value=1.4e-25 Score=236.58 Aligned_cols=274 Identities=13% Similarity=0.174 Sum_probs=177.2
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
++.+.+.+|+.++|.|.+.+...+.+.|.|+|+ |..+ ....|+.+..+ ++..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 346789999999999999843224678999996 4322 12457777654 45679999999
Q ss_pred ccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccc
Q psy2166 132 YDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQH 211 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 211 (805)
+.+|+|.|+|.|.|..+.......|.|...+ ..+|.+....+.
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~~~~~ 129 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWGQGTLVTVSSAS-------------------------------------TKGPSVFPLAPS 129 (344)
T ss_dssp CGGGCEEEEEEETTTTCEECCCEEEEECSSC-------------------------------------CBCCEEEEECCS
T ss_pred CcccCEEEEEEEecCcceecCcEEEEEecCC-------------------------------------CCCCeEEEcccc
Confidence 9999999999999865444445667775311 023444433222
Q ss_pred ccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 212 LSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 212 ~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
. .+.+|+.++|.|.+.. ..|. +.|.|+|+|..+...........++ ...|.|.+++.+| |.|+|.|.|..+.
T Consensus 130 ~-~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 130 S-KSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 206 (344)
T ss_dssp C-TTTSSSEEEEEEEEEE-EBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGT
T ss_pred c-cccCCCcEEEEEEEee-EECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 2 3679999999999852 2354 7999999997642110000001111 2479999998888 9999999998876
Q ss_pred EEEEEEEEEec-------------------cCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEc
Q psy2166 287 AEISVNLECVD-------------------KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 347 (805)
Q Consensus 287 ~~~~~~l~v~~-------------------~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l 347 (805)
......+.+.. .....+|.+........ ...|..++|.|.+.|...+.+.|+|+|||..+
T Consensus 207 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 285 (344)
T 1za6_B 207 TKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 285 (344)
T ss_dssp EEEEEEECCCCC--------------------CCBCCEEEEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEESSSSCC
T ss_pred ccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEECCeEC
Confidence 54333332110 01124566655444333 23466699999998422235799999999887
Q ss_pred cCCCceEE--EEeCc---EEEEEEcccCcCCceEEEEEEEeCcee
Q psy2166 348 FHKNRVKM--VSDFG---FVVMDIAYVQSHDSGEYVCRAWNKYGE 387 (805)
Q Consensus 348 ~~~~~~~~--~~~~~---~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 387 (805)
........ ..++. ...|.|.....+|.|.|+|.|.|....
T Consensus 286 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 286 NNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp CSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred CCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 64322111 11111 134677777777899999999997643
No 98
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.93 E-value=1.1e-24 Score=209.65 Aligned_cols=191 Identities=21% Similarity=0.356 Sum_probs=155.0
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCC-CceEEEe-eCCEEEEEEccCCCCCCEEEEE
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHG-HRYRTFH-DFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~-~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
.+|.|...+.... +.+|+.++|.|.+. +.|.+.++|+|+|..+... .++.+.. .++...|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~~~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 3 MAPHFKEELRNLN-VRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCCEEEECCCCEE-EETTSCEEEEEEEE--CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCCEEEEcCCccE-EcCCCEEEEEEEEe--ecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 6788888776654 89999999999999 7788999999999998754 4555543 4556679999999999999999
Q ss_pred EEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCc
Q psy2166 572 RATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG 651 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 651 (805)
.|.|..|.....+.|.|..++.+.
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~~~-------------------------------------------------------- 103 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAKIH-------------------------------------------------------- 103 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEEC--------------------------------------------------------
T ss_pred EEEECCCceeEEEEEEEcCCCcCC--------------------------------------------------------
Confidence 999888887777777776544321
Q ss_pred ceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEEC
Q psy2166 652 SDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN 731 (805)
Q Consensus 652 ~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~ 731 (805)
.|.+...+... .+.+|+.+.|.|.+. |.|.|.|.|+|+
T Consensus 104 ---------------------------------------~~~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~i~W~~~ 141 (197)
T 2j8h_A 104 ---------------------------------------LPKTLEGMGAV-HALRGEVVSIKIPFS--GKPDPVITWQKG 141 (197)
T ss_dssp ---------------------------------------CSSCBTTBEEE-EEETTCCCEEEEEEE--EESCCEEEEEES
T ss_pred ---------------------------------------CCccccccCeE-EEeCCCEEEEEEEEE--ecCCCcEEEEEC
Confidence 01111111222 678899999999999 999999999999
Q ss_pred CEEccCCCCeEEEeeCcEEEEEEcC-CCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 732 GKPIEASHRIRTVHAFGMVVLEILG-TKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 732 g~~l~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
|..+..+.++.+........|.|.+ +..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 142 QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp SCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 9999988888887777778999999 99999999999999999999999999986
No 99
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.93 E-value=3.3e-25 Score=213.94 Aligned_cols=201 Identities=14% Similarity=0.215 Sum_probs=145.3
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeC--CEEEEEEccCCCCCCEEEEEE
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDF--GIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
.|.|...+. ..+.+|+.+.|.|.+.+ +.|.|.|+|+|||++|..+.++.+..+. +...|.|.+++.+|+|.|+|.
T Consensus 3 ~p~~~~~~~--~~v~eg~~v~l~c~~~~-~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 3 DPFTKSELA--VEILEKGQVRFWMQAEK-LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp ---CCEEEE--EEECGGGCEEEEEECSC-CCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCeeecCCc--eEEEeCCeEEEEEEEec-CCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 456655543 34899999999999974 5799999999999999888888776554 667899999999999999999
Q ss_pred EEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcc
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 652 (805)
|.| |.....+.+.+....... + +....+
T Consensus 80 a~N--g~a~~~~~~~~~~~~~~~----------------~----------------~~~~~~------------------ 107 (207)
T 3rbs_A 80 LQD--GKATNHSTVVLVGDVFKK----------------L----------------QKEAEF------------------ 107 (207)
T ss_dssp EEE--TTEEEEEEEEECTHHHHH----------------H----------------HHHHHH------------------
T ss_pred EEC--CCeEEEEEEEEEccchhh----------------h----------------cccccc------------------
Confidence 998 555444433221110000 0 000000
Q ss_pred eEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC-CCeEEEEEEC
Q psy2166 653 DVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-QTMTVEFLYN 731 (805)
Q Consensus 653 ~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~~~v~W~~~ 731 (805)
.+.. ... ..+|.|...+ +. .+.+|+.+.|.|.+. |. |.|.|+|+||
T Consensus 108 -------~~~~--------~~~--------------~~~P~~~~~~-~~-~v~~g~~v~l~C~v~--g~~P~p~i~W~k~ 154 (207)
T 3rbs_A 108 -------QRQE--------WIR--------------KQGPHFVEYL-SW-EVTGECNVLLKCKVA--NIKKETHIVWYKD 154 (207)
T ss_dssp -------HHHH--------HHH--------------HTSSEEEEEE-EE-EEETTTEEEEEEEEE--SCCTTCEEEEEET
T ss_pred -------cccc--------ccc--------------CCCCceEecC-Cc-EEcCCCcEEEEEEEe--CCCCCCEEEEEEC
Confidence 0000 000 0356666655 34 788999999999999 98 9999999999
Q ss_pred CEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 732 GKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 732 g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
|+++..+.++. ...+..+|.|.++..+|+|.|+|.|.|.+|.++.++.|+++
T Consensus 155 g~~l~~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 155 EREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp TEEECCCCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CEECCCCCceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 99998876653 33455689999999999999999999999999999999763
No 100
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=3.5e-24 Score=206.19 Aligned_cols=192 Identities=21% Similarity=0.302 Sum_probs=161.3
Q ss_pred CCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 492 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 492 ~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
+..+|.|...+.... +.+|+.++|.|.+. +.|.+.+.|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|
T Consensus 4 ~~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (197)
T 3lcy_A 4 SGEAPGIRKEMKDVT-TKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTC 80 (197)
T ss_dssp CCEEEEEEECCCCEE-EETTSEEEEEEEEE--EESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEE
T ss_pred cCCCCcccccCCceE-EeCCCcEEEEEEEe--cCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEE
Confidence 356788888777664 89999999999998 568889999999999998888888888888899999999999999999
Q ss_pred EEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCc
Q psy2166 572 RATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG 651 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 651 (805)
.|.|..|.....+.|.|...+.+....+
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~p~~~~~~~---------------------------------------------------- 108 (197)
T 3lcy_A 81 IATNEVGEVETSSKLLLQATPQFHPGYP---------------------------------------------------- 108 (197)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECTTSC----------------------------------------------------
T ss_pred EEECCCCceeEEEEEEEEcCCCCCCCcc----------------------------------------------------
Confidence 9999998888777777765443110000
Q ss_pred ceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEEC
Q psy2166 652 SDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN 731 (805)
Q Consensus 652 ~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~ 731 (805)
.+... .+.+|+.+.|.|.+. |.|.|.+.|+++
T Consensus 109 ---------------------------------------------~~~~~-~~~~g~~~~l~C~~~--~~p~p~v~W~~~ 140 (197)
T 3lcy_A 109 ---------------------------------------------LKEKY-YGAVGSTLRLHVMYI--GRPVPAMTWFHG 140 (197)
T ss_dssp ---------------------------------------------CCSEE-EEETTSCEEEEEEEE--EESCCEEEEEET
T ss_pred ---------------------------------------------CCcce-eecCCCeEEEEEEEe--eeeCCeeEEeEC
Confidence 00111 566799999999999 899999999999
Q ss_pred CEEccCCCCeEEEeeCcEEEEEEcCCCC-CCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 732 GKPIEASHRIRTVHAFGMVVLEILGTKI-EDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 732 g~~l~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
|..+..+.++.+...+....|.|.++.. +|+|.|+|.|.|.+|..+.++.|.|..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 141 QKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp TEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9999999898888777778999999995 899999999999999999999999864
No 101
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=3.4e-24 Score=208.90 Aligned_cols=196 Identities=23% Similarity=0.283 Sum_probs=148.3
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEE-eeCCEEEEEEccC-CCCCCEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTF-HDFGIVILDILYC-YEENSGVYE 570 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~v-~~~d~G~Y~ 570 (805)
..+|.|...+.+.. +.+|+.+.|.|.+. |.|.+.++|+|+|..+..+...... .++....|.|.++ +.+|+|.|+
T Consensus 4 ~~~P~~~~~p~~~~-v~~G~~v~L~C~~~--g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 80 (212)
T 2yd6_A 4 ETPPRFTRTPVDQT-GVSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYE 80 (212)
T ss_dssp CEEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEE
T ss_pred CCCCeEEeCcceeE-EecCCeEEEEEEEe--eCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEE
Confidence 56788888877765 89999999999999 6688899999999999765433322 2334566888888 478888888
Q ss_pred EEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCC
Q psy2166 571 CRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650 (805)
Q Consensus 571 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 650 (805)
|.|.|..|.....+.|.|...+.+
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~-------------------------------------------------------- 104 (212)
T 2yd6_A 81 CVASNNVGEISVSTRLTVLREDQI-------------------------------------------------------- 104 (212)
T ss_dssp EEEEETTEEEEEEEEEEEECGGGC--------------------------------------------------------
T ss_pred EEEEcCCCcEEEEEEEEEeccCcc--------------------------------------------------------
Confidence 888887777666666666543220
Q ss_pred cceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEE
Q psy2166 651 GSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY 730 (805)
Q Consensus 651 g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~ 730 (805)
| ...|.|...+... .+.+|+.+.|.|.+. |.|.|.|+|+|
T Consensus 105 -----------------------~--------------~~~p~~~~~~~~~-~~~~g~~v~l~C~~~--g~p~p~v~W~~ 144 (212)
T 2yd6_A 105 -----------------------P--------------RGFPTIDMGPQLK-VVERTRTATMLCAAS--GNPDPEITWFK 144 (212)
T ss_dssp -----------------------C--------------TTCCEEEECCCCE-EEETTSCEEEEEEEE--CSSCCEEEEEE
T ss_pred -----------------------C--------------CCcceeecCCcce-eEecCCCEEEEEEec--CCCCCeEEEEE
Confidence 0 0235555555555 788999999999998 99999999999
Q ss_pred CCEEccCC---CCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEE-EEEEEEEEEe
Q psy2166 731 NGKPIEAS---HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLECVVW 787 (805)
Q Consensus 731 ~g~~l~~~---~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~~~ 787 (805)
+|..+... .++..........|.|.++..+|+|.|+|.|.|.+|... ..+.|.|++.
T Consensus 145 ~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 145 DFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp TTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 99998865 566666666778999999999999999999999999764 5567777653
No 102
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.92 E-value=4.5e-24 Score=204.89 Aligned_cols=188 Identities=22% Similarity=0.384 Sum_probs=157.8
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCC--ceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGS--RFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~--~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.+|.|...+. .+.+.+|+.++|.|.+. +.|.+.|.|+|+|..+.... ++.+...++..+|.|.+++.+|+|.|+|
T Consensus 4 ~~P~~~~~~~-~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (194)
T 2a38_A 4 QAPTFTQPLQ-SVVVLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL 80 (194)
T ss_dssp EEEEEEECCC-CEEEETTSCEEEEEEEE--EESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEccCC-ceEEECCCEEEEEEEEE--ecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEE
Confidence 3567766554 68999999999999998 57888999999999887664 6777777778899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 142 RAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
.+.|..|.......|.|.... .+|.+...+... .+.+|+.+
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~~--------------------------------------~~p~~~~~~~~~-~~~~g~~~ 121 (194)
T 2a38_A 81 KATNGSGQATSTAELLVKAET--------------------------------------APPNFVQRLQSM-TVRQGSQV 121 (194)
T ss_dssp EEEETTEEEEEEEEEEEECCC--------------------------------------EEEEEEECCCCE-EECTTEEE
T ss_pred EEEcCCceEeEEEEEEEccCC--------------------------------------CCCEEEeCCccE-EEcCCCEE
Confidence 999999988888888886421 234455444433 47899999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEE
Q psy2166 222 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 222 ~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 295 (805)
.|.|.+ .+.|.+.+.|+++|..+....++.....+....|.|.+++.+|+|.|+|.|.|..|....++.|.|
T Consensus 122 ~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 122 RLQVRV--TGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEEE--EEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEE--EEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEE
Confidence 999998 577888999999999999888888777777789999999999999999999999999888888776
No 103
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.92 E-value=9.3e-24 Score=205.81 Aligned_cols=193 Identities=27% Similarity=0.378 Sum_probs=151.6
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEcc-CCCceEEEe-eCCEEEEEEccCCC-CCCEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLP-HGHRYRTFH-DFGIVILDILYCYE-ENSGVY 569 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~-~~~~~~~~~-~~~~~~L~i~~v~~-~d~G~Y 569 (805)
..+|.|...+.+.. +.+|+.++|.|.+. |.|.+.++|+++|..+. ...++.+.. .++...|.|.+++. +|+|.|
T Consensus 4 ~~pP~~~~~p~~~~-v~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y 80 (212)
T 2yd1_A 4 AHPPEIIRKPQNQG-VRVGGVASFYCAAR--GDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPY 80 (212)
T ss_dssp -CCCEEEECCCCEE-EETTSCEEEEEEEE--CSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEE
T ss_pred CCCCEEEcCCCceE-EecCCEEEEEEEEc--cCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceE
Confidence 47899988877765 89999999999999 77888999999999997 556666544 35557899999998 899999
Q ss_pred EEEEEcCCcc-eEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEe
Q psy2166 570 ECRATNKYGS-DVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648 (805)
Q Consensus 570 ~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 648 (805)
+|.|.|..|. ....+.|.|...+.. +
T Consensus 81 ~C~~~n~~g~~~~~~~~l~V~~~~~~------~----------------------------------------------- 107 (212)
T 2yd1_A 81 ECVAENGVGDAVSADATLTIYEGDKT------P----------------------------------------------- 107 (212)
T ss_dssp EEEEECSSSCEEEEEEEEEEECTTCS------C-----------------------------------------------
T ss_pred EEEEEeCCCCeEEeeEEEEEecccCC------C-----------------------------------------------
Confidence 9999888877 556666666543220 0
Q ss_pred CCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEE
Q psy2166 649 KYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEF 728 (805)
Q Consensus 649 ~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W 728 (805)
..+|.|...+... .+.+|+.+.|.|.+. |.|.|.|+|
T Consensus 108 ----------------------------------------~~~p~~~~~~~~~-~~~~g~~v~l~C~~~--g~p~p~i~W 144 (212)
T 2yd1_A 108 ----------------------------------------AGFPVITQGPGTR-VIEVGHTVLMTCKAI--GNPTPNIYW 144 (212)
T ss_dssp ----------------------------------------TTCCEEEECCCCE-EEETTCCEEECCEEE--CSSCCEEEE
T ss_pred ----------------------------------------CCCCeeEeCCCce-EeecCCeEEEEEEec--cCCCCeEEE
Confidence 0235566556566 788999999999998 999999999
Q ss_pred EECCEEccCC-CCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEE-EEEEEEEeC
Q psy2166 729 LYNGKPIEAS-HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS-VNLECVVWS 788 (805)
Q Consensus 729 ~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~~~ 788 (805)
+++|..+... .++. . ..+ .|.|.++..+|+|.|+|.|.|.+|..... +.|.|....
T Consensus 145 ~~~~~~~~~~~~~~~-~-~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 145 IKNQTKVDMSNPRYS-L-KDG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EETTEECCTTSTTEE-E-ETT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EECCeEcccCCCeEE-c-cCC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 9999998864 3443 2 234 79999999999999999999999998765 889987653
No 104
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.92 E-value=7.5e-25 Score=228.76 Aligned_cols=263 Identities=15% Similarity=0.180 Sum_probs=166.2
Q ss_pred CcEEEEEEEecCCCC-CceEEEEECCEecCCCCce--EEEecCc---EEEEEEcccccCCCeEEEEEEEeCCeeEEEEEE
Q psy2166 82 QPLHLEAQVEPKNDP-NLKIEWIFNGKPLELGSRF--KTTADFG---FVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTT 155 (805)
Q Consensus 82 ~~v~L~C~~~~~~~p-~~~v~W~k~g~~i~~~~~~--~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 155 (805)
+.++|.|.+.+. .| .+.|+|+|||..+..+... ....++. .+.|.|.+++.+|+|.|+|.|.|..+.......
T Consensus 25 ~~v~L~C~~~g~-~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 103 (323)
T 2wqr_A 25 PTIQLLCLVSGY-TPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTK 103 (323)
T ss_dssp SEEEEEEEEEEE-CCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeCe-ECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeee
Confidence 699999999852 33 5799999999998755322 1112221 236889999889999999999998765443322
Q ss_pred EEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCe
Q psy2166 156 IYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM 235 (805)
Q Consensus 156 l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~ 235 (805)
+.+... ..+|.+...++....+.+|+.++|.|.+.. ..|.+
T Consensus 104 ~~~~~~--------------------------------------~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g-~~P~p 144 (323)
T 2wqr_A 104 KCADSN--------------------------------------PRGVSAYLSRPSPFDLFIRKSPTITCLVVD-LAPSK 144 (323)
T ss_dssp CCCCSS--------------------------------------GGGCEEEECCCCHHHHHTSSCCEEEEEEEE-ECCCS
T ss_pred cCCCCC--------------------------------------CCCCEEEEcCCCHHHhccCCeEEEEEEEec-cCCCC
Confidence 100000 012222222222224778999999999842 24444
Q ss_pred ---EEEEEECC-EEccCCCcEEEEEEc----CeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEE
Q psy2166 236 ---TVEFLYNG-KPIEASHRIRTVHAF----GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFT 307 (805)
Q Consensus 236 ---~i~W~k~g-~~l~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~ 307 (805)
.|.|||++ ..+...........+ ....|.|.+++.+|+|.|+|.|.|..+.......+.+. .....+|.+.
T Consensus 145 ~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~-~~~~~~P~v~ 223 (323)
T 2wqr_A 145 GTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKT-SGPRAAPEVY 223 (323)
T ss_dssp SCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCC-CSCCBCCEEE
T ss_pred CceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEcc-CCCCCCCEEE
Confidence 99999964 554332222111111 23579999999999999999999986433222222211 0111456655
Q ss_pred ecCCCcccccCCCeEEEEEEEeecCCCC-cEEEEEECCEEccCCCceE---EEE-eC---cEEEEEEcccCcCCceEEEE
Q psy2166 308 SHIKSLEGLKDGDSAHFECTLTPVNDPE-LKVEWFHNGKPIFHKNRVK---MVS-DF---GFVVMDIAYVQSHDSGEYVC 379 (805)
Q Consensus 308 ~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~---~~~-~~---~~~~l~i~~v~~~d~G~Y~C 379 (805)
..+.... ...|+.++|.|.+.+ ..|. ..|.|+|||..+....... ... ++ ....|.|..+..+|+|.|+|
T Consensus 224 ~~~~~~~-~~~g~~~~l~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C 301 (323)
T 2wqr_A 224 AFATPEW-PGSRDKRTLACLIQN-FMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFIC 301 (323)
T ss_dssp EEECCCC-TTCTTEEEEEEEEEE-EBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEE
T ss_pred EeCCChH-HhcCCcEEEEEEeee-eeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEE
Confidence 4443332 234999999999984 2443 4899999999986532110 001 11 12368999999999999999
Q ss_pred EEEeCcee
Q psy2166 380 RAWNKYGE 387 (805)
Q Consensus 380 ~a~n~~g~ 387 (805)
.|.|..+.
T Consensus 302 ~a~n~~~~ 309 (323)
T 2wqr_A 302 RAVHEAAS 309 (323)
T ss_dssp EEECTTST
T ss_pred EEEeCCCC
Confidence 99998875
No 105
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.92 E-value=2e-24 Score=227.64 Aligned_cols=289 Identities=13% Similarity=0.134 Sum_probs=176.1
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc-----------------CCCcEEEEEE--cCeEEEEEcCCCCcc
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE-----------------ASHRIRTVHA--FGMVVLEILGTKIED 272 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d 272 (805)
.+.+|+.++|.|.+.....+.+.+.|||+ |..+. ...++.+..+ .+...|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (344)
T 1za6_B 11 VVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSED 90 (344)
T ss_dssp EECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 47899999999998532224688999996 43221 1245555443 346789999999999
Q ss_pred cEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCC-cEEEEEECCEEccCCC
Q psy2166 273 TGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-LKVEWFHNGKPIFHKN 351 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~-~~v~W~~~g~~l~~~~ 351 (805)
+|.|+|.+.|..+.......|.|..... .+|.+........ +.+|+.++|.|.+.| ..|. +.|.|+++|..+....
T Consensus 91 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~~-~~P~i~~~~~~~~-~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~ 167 (344)
T 1za6_B 91 TAVYFCTRSLNMAYWGQGTLVTVSSAST-KGPSVFPLAPSSK-STSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHT 167 (344)
T ss_dssp CEEEEEEETTTTCEECCCEEEEECSSCC-BCCEEEEECCSCT-TTSSSEEEEEEEEEE-EBSSCCCEEETTTTBCTTEEE
T ss_pred CEEEEEEEecCcceecCcEEEEEecCCC-CCCeEEEcccccc-ccCCCcEEEEEEEee-EECCCeEEEEecCCccCceeE
Confidence 9999999999655544556677653221 3455544333333 679999999999984 3354 7999999997642110
Q ss_pred ceEEEEeC----cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCc
Q psy2166 352 RVKMVSDF----GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPV 427 (805)
Q Consensus 352 ~~~~~~~~----~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 427 (805)
.......+ ....|.|..+..+| |.|+|.|.|..+.......+.+... ++.....+
T Consensus 168 ~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~--~~~~~~~~------------------ 226 (344)
T 1za6_B 168 FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSC--DKTHTCPP------------------ 226 (344)
T ss_dssp CCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC----------------------------
T ss_pred CCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeeccccc--ccccccCC------------------
Confidence 00000111 12368898888878 9999999999886544433321100 00000000
Q ss_pred cccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCccc
Q psy2166 428 AQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQ 507 (805)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 507 (805)
|.+. ...........+|.+....+....
T Consensus 227 -------------------------------------------~~~~---------~~l~~~~~~~~~P~v~~~~~~~~~ 254 (344)
T 1za6_B 227 -------------------------------------------CGGG---------SSGGGSGGQPREPQVYTLPPSRDE 254 (344)
T ss_dssp ----------------------------------------------------------------CCBCCEEEEECCCGGG
T ss_pred -------------------------------------------CCCC---------ccccccCCCCcCCEEEEeCCChHh
Confidence 0000 000000122467777765544432
Q ss_pred ccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE--EeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 508 LKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT--FHDFG---IVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 508 v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
+ +|..++|.|.+.++.+|.+.++|+|||..+........ ..++. .+.|.|.....+|+|.|+|.|.|....
T Consensus 255 ~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 255 L-TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp G-GSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred c-cCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 3 46669999999964334679999999998864322111 22222 234677766667899999999997654
No 106
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.92 E-value=1.7e-23 Score=201.35 Aligned_cols=191 Identities=17% Similarity=0.311 Sum_probs=156.7
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC-CceEEEe-cCcEEEEEEcccccCCCeEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG-SRFKTTA-DFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~-~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.+|.|...+. .+.+.+|+.++|.|.+. +.|.+.|.|+|+|..+... .++.+.. +++.++|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~~~-~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 3 MAPHFKEELR-NLNVRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCCEEEECCC-CEEEETTSCEEEEEEEE--CSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCCEEEEcCC-ccEEcCCCEEEEEEEEe--ecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 4677776654 78999999999999998 6888999999999998764 4666553 5667799999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 142 RAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
.+.|..|.......|.|..++.+. .|.+...+... .+.+|+.+
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~~~------------------------------------~~~~~~~~~~~-~~~~g~~~ 122 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAKIH------------------------------------LPKTLEGMGAV-HALRGEVV 122 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEEC------------------------------------CSSCBTTBEEE-EEETTCCC
T ss_pred EEEECCCceeEEEEEEEcCCCcCC------------------------------------CCccccccCeE-EEeCCCEE
Confidence 999999988888888887654321 12222222222 36789999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcC-CCCcccEEEEEEEEcCCeeEEEEEEEEEe
Q psy2166 222 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG-TKIEDTGVYTCRATNKWGQAEISVNLECV 296 (805)
Q Consensus 222 ~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 296 (805)
.|.|.+ .+.|.+.+.|+++|..+....++.+........|.|.+ ++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 123 ~l~C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 123 SIKIPF--SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEEEEE--EEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEE--EecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 999998 57888999999999999888787776666778999999 99999999999999999999888888875
No 107
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.92 E-value=2.2e-23 Score=199.21 Aligned_cols=182 Identities=24% Similarity=0.304 Sum_probs=136.8
Q ss_pred CCCceEecCCCcccccC-CCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 494 EAPKFITQISDVTQLKE-GQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~-G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
.+|.+.... ... +.+ |+.++|.|.+.+.+.|.+.++|+|+|..+..+.... ....
T Consensus 2 ~~P~i~~~~-~~~-v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~----------------- 57 (190)
T 2wv3_A 2 NEPRIVTSE-EVI-IRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNME----------------- 57 (190)
T ss_dssp -CCEEEECC-CEE-CCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEE-----------------
T ss_pred CCCcccccc-eEE-EccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEE-----------------
Confidence 467776643 333 556 999999999995333338999999999876542111 1122
Q ss_pred EEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcc
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 652 (805)
|.|.+++.+|+|.|+|.|.|. |.
T Consensus 58 --------------------------------------------------------L~i~~~~~~d~G~Y~C~~~n~-~~ 80 (190)
T 2wv3_A 58 --------------------------------------------------------YRINKPRAEDSGEYHCVYHFV-SA 80 (190)
T ss_dssp --------------------------------------------------------EEESSCCGGGCEEEEEEEEET-TE
T ss_pred --------------------------------------------------------EEEecCCcccCEEEEEEEEeC-Cc
Confidence 556666666666666666666 55
Q ss_pred eEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEE--
Q psy2166 653 DVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY-- 730 (805)
Q Consensus 653 ~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~-- 730 (805)
....+.|.|. .+|.|...+.+. .+.+|+.+.|.|.+. |+|.|.+.|++
T Consensus 81 ~~~~~~l~V~---------------------------~~p~~~~~~~~~-~~~~g~~v~l~C~~~--g~p~p~i~W~~~~ 130 (190)
T 2wv3_A 81 PKANATIEVK---------------------------AAPDITGHKRSE-NKNEGQDAMMYCKSV--GYPHPEWMWRKKE 130 (190)
T ss_dssp EEEEEEEEEE---------------------------CCCEEEEECSEE-EEETTSCEEEEEEEE--CSSCCEEEEEEEE
T ss_pred ccccEEEEEe---------------------------cCCcccccCCcc-eeeCCCcEEEEEEeC--ccCCCceEEEEcC
Confidence 5556666665 356666666666 788999999999998 99999999999
Q ss_pred CCEEcc---CCCCeEEEeeCcEEEEEEcCCC-CCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 731 NGKPIE---ASHRIRTVHAFGMVVLEILGTK-IEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 731 ~g~~l~---~~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
+|..+. .+.++.+..+++...|.|.++. .+|+|.|+|.|.|.+|....++.|.|.+
T Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~V 190 (190)
T 2wv3_A 131 NGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVRV 190 (190)
T ss_dssp TTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEEC
Confidence 888775 5677777777777899999999 7999999999999999999999999864
No 108
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.92 E-value=6.8e-24 Score=204.70 Aligned_cols=200 Identities=17% Similarity=0.231 Sum_probs=145.4
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecC--cEEEEEEcccccCCCeEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADF--GFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
.|.|...+ ++.|.+|+.+.|.|.+.. +.|.+.|+|+|||.+|..+.++.+..++ +.++|.|.+++.+|+|.|+|.
T Consensus 3 ~p~~~~~~--~~~v~eg~~v~l~c~~~~-~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 3 DPFTKSEL--AVEILEKGQVRFWMQAEK-LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp ---CCEEE--EEEECGGGCEEEEEECSC-CCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCeeecCC--ceEEEeCCeEEEEEEEec-CCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 46666655 578999999999999973 4799999999999999998888887665 778899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
|.| |.......+.+....... .....+...... ....+|.|...+. ..+.+|+.+.
T Consensus 80 a~N--g~a~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~-------~~~~~P~~~~~~~--~~v~~g~~v~ 135 (207)
T 3rbs_A 80 LQD--GKATNHSTVVLVGDVFKK-------------LQKEAEFQRQEW-------IRKQGPHFVEYLS--WEVTGECNVL 135 (207)
T ss_dssp EEE--TTEEEEEEEEECTHHHHH-------------HHHHHHHHHHHH-------HHHTSSEEEEEEE--EEEETTTEEE
T ss_pred EEC--CCeEEEEEEEEEccchhh-------------hccccccccccc-------ccCCCCceEecCC--cEEcCCCcEE
Confidence 999 444444444322110000 000000000000 0003577776653 3578999999
Q ss_pred EEEEEeeCCC-CCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEE
Q psy2166 223 FEASLIPVGD-QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 223 l~C~~~~~~~-p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 295 (805)
|.|.+ .+. |.|.|+|+|+|.+|....++ ....+...|.|.+++.+|+|.|+|.|.|..|....++.|..
T Consensus 136 l~C~v--~g~~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 136 LKCKV--ANIKKETHIVWYKDEREISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEEEE--ESCCTTCEEEEEETTEEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEE--eCCCCCCEEEEEECCEECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 99998 577 89999999999999776553 22344568999999999999999999999999998888764
No 109
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.91 E-value=3.3e-23 Score=199.31 Aligned_cols=190 Identities=19% Similarity=0.272 Sum_probs=158.9
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
.+|.|...+. .+.+.+|+.++|.|.+. +.|.+.+.|+|++..+....++.+..++...+|.|.+++.+|+|.|+|.+
T Consensus 6 ~~P~~~~~~~-~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 6 EAPGIRKEMK-DVTTKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp EEEEEEECCC-CEEEETTSEEEEEEEEE--EESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCcccccCC-ceEEeCCCcEEEEEEEe--cCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 4566766554 78999999999999998 57888999999999999889999998888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEE
Q psy2166 144 WNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHF 223 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 223 (805)
.|..|.......|.|..++...... .......+.+|+.+.|
T Consensus 83 ~n~~~~~~~~~~l~v~~~p~~~~~~---------------------------------------~~~~~~~~~~g~~~~l 123 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQATPQFHPGY---------------------------------------PLKEKYYGAVGSTLRL 123 (197)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECTTS---------------------------------------CCCSEEEEETTSCEEE
T ss_pred ECCCCceeEEEEEEEEcCCCCCCCc---------------------------------------cCCcceeecCCCeEEE
Confidence 9999888888888887654321100 0011123678999999
Q ss_pred EEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCC-cccEEEEEEEEcCCeeEEEEEEEEEec
Q psy2166 224 EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKI-EDTGVYTCRATNKWGQAEISVNLECVD 297 (805)
Q Consensus 224 ~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 297 (805)
.|.+ .+.|.+.+.|+++|..+....++..........|.|.++.. +|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 124 ~C~~--~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 124 HVMY--IGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEEE--EEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred EEEE--eeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 9998 57888999999999999988888777666678999999995 899999999999999999998888764
No 110
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.91 E-value=1.7e-22 Score=193.41 Aligned_cols=183 Identities=22% Similarity=0.362 Sum_probs=146.1
Q ss_pred CCceEecCCC-cccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEE
Q psy2166 495 APKFITQISD-VTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRA 573 (805)
Q Consensus 495 ~P~~~~~~~~-~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 573 (805)
||.|...... ...+.+|+.++|.|.+. +.|.+.+.|+++|..+....++.+...+. .|.|.+++.+|+|.|+|.+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~ 77 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRA 77 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEE--CSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeec--cCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEE
Confidence 6777765432 34488999999999998 77888999999999998887776654443 6999999999999999999
Q ss_pred EcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcce
Q psy2166 574 TNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653 (805)
Q Consensus 574 ~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 653 (805)
.|..|.....+.|.|..++.+
T Consensus 78 ~~~~~~~~~~~~l~V~~~p~~----------------------------------------------------------- 98 (192)
T 2va4_A 78 TNKAGEDEKQAFLQVFVQPHI----------------------------------------------------------- 98 (192)
T ss_dssp EETTEEEEEEEEEEEEEEEEE-----------------------------------------------------------
T ss_pred EccccccceEEEEEEEccCcc-----------------------------------------------------------
Confidence 998888776666666433220
Q ss_pred EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEEC--
Q psy2166 654 VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN-- 731 (805)
Q Consensus 654 ~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~-- 731 (805)
... ... .+.+|+.+.|.|.+. |+|.+.+.|+++
T Consensus 99 -----------------------------------------~~~-~~~-~~~~g~~v~l~C~~~--~~p~~~v~W~~~~~ 133 (192)
T 2va4_A 99 -----------------------------------------IQL-KNE-TTYENGQVTLVCDAE--GEPIPEITWKRAVD 133 (192)
T ss_dssp -----------------------------------------EEE-CCE-EECTTSEEEEEEEEE--EESCCEEEEEETTT
T ss_pred -----------------------------------------ccc-Ccc-eEEeCCeEEEEEEec--CCCCCcEEEEeCCC
Confidence 000 011 455699999999998 899999999998
Q ss_pred CEEccC-----CCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 732 GKPIEA-----SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 732 g~~l~~-----~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
|..+.. ..++.+....+...|.|.++..+|+|.|+|.|.|.+|..+.++.|.|+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 134 GFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp TEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 776654 356666666777899999999999999999999999999999999883
No 111
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=3.2e-22 Score=194.86 Aligned_cols=197 Identities=23% Similarity=0.317 Sum_probs=151.8
Q ss_pred CCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEE-eCcEEEEEEccc-CcCCceEEEE
Q psy2166 302 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS-DFGFVVMDIAYV-QSHDSGEYVC 379 (805)
Q Consensus 302 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-~~~~~~l~i~~v-~~~d~G~Y~C 379 (805)
.+|.+...+.+.. +.+|+.+.|.|.+. +.|.+.|.|+++|..+.......... +.....|.|.++ ..+|+|.|+|
T Consensus 5 ~~P~~~~~p~~~~-v~~G~~v~L~C~~~--g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTRTPVDQT-GVSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEeCcceeE-EecCCeEEEEEEEe--eCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 4667776666654 88999999999998 77889999999999987654333322 234567999999 4999999999
Q ss_pred EEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEE
Q psy2166 380 RAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEA 459 (805)
Q Consensus 380 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (805)
.|.|..|.....+.|.|...+..
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~--------------------------------------------------------- 104 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQI--------------------------------------------------------- 104 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGC---------------------------------------------------------
T ss_pred EEEcCCCcEEEEEEEEEeccCcc---------------------------------------------------------
Confidence 99999999888888888643210
Q ss_pred EEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEc
Q psy2166 460 RLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKL 539 (805)
Q Consensus 460 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l 539 (805)
....|.+...+.... +.+|+.++|.|.+. |.|.+.++|+++|..+
T Consensus 105 --------------------------------~~~~p~~~~~~~~~~-~~~g~~v~l~C~~~--g~p~p~v~W~~~g~~l 149 (212)
T 2yd6_A 105 --------------------------------PRGFPTIDMGPQLKV-VERTRTATMLCAAS--GNPDPEITWFKDFLPV 149 (212)
T ss_dssp --------------------------------CTTCCEEEECCCCEE-EETTSCEEEEEEEE--CSSCCEEEEEETTEEC
T ss_pred --------------------------------CCCcceeecCCccee-EecCCCEEEEEEec--CCCCCeEEEEECCccc
Confidence 023456665554443 78999999999998 7789999999999999
Q ss_pred cCC---CceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceE-EEEEEEEeeeee
Q psy2166 540 PHG---HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV-TKASLKCVSKTN 593 (805)
Q Consensus 540 ~~~---~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~ 593 (805)
... .++.....+....|.|.++..+|+|.|+|.|.|..|... ..+.|.|...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~ 207 (212)
T 2yd6_A 150 DTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKH 207 (212)
T ss_dssp ------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred cCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEeccc
Confidence 753 566666666778899999999999999999999999875 457777776543
No 112
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=2.2e-22 Score=196.09 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=140.9
Q ss_pred CCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccccccc-------
Q psy2166 599 QLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILES------- 671 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~------- 671 (805)
|.|.+.|+|+|..+..+.++.+...++...|.|.++..+|+|.|+|.|.|..|.....+.|.|...+......
T Consensus 31 p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~ 110 (212)
T 2r15_A 31 EDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAA 110 (212)
T ss_dssp SSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCccc
Confidence 5789999999999999899998888888899999999999999999999999888877777664311100000
Q ss_pred ccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEee-CcEE
Q psy2166 672 QLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA-FGMV 750 (805)
Q Consensus 672 ~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~ 750 (805)
..+. ..|+.+...+... .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+..+.++.+... ++..
T Consensus 111 ~~~~-------------~~p~~~~~~~~~~-~v~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 111 IAEK-------------NRARVLGGLPDVV-TIQEGKALNLTCNVW--GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp HHHH-------------HSCEEEEBCCSEE-EEETTCCEEEEEEEE--CSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred cccc-------------CCCcccccCCCcE-EEccCCeEEEEEEEc--CCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 0000 0234444445556 899999999999999 999999999999999999888887666 6678
Q ss_pred EEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 751 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 751 ~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
.|.|.++..+|+|.|+|.|.|.+|..+.++.|.|.+
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 999999999999999999999999999999998864
No 113
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.90 E-value=4.3e-22 Score=194.00 Aligned_cols=193 Identities=24% Similarity=0.419 Sum_probs=152.7
Q ss_pred CCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEcc-CCCceEEEEe-CcEEEEEEcccCc-CCceEEE
Q psy2166 302 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIF-HKNRVKMVSD-FGFVVMDIAYVQS-HDSGEYV 378 (805)
Q Consensus 302 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~-~~~~~~~~~~-~~~~~l~i~~v~~-~d~G~Y~ 378 (805)
.+|.+...+.... +.+|+.++|.|.+. +.|.+.+.|+++|..+. ...++.+... ++...|.|.++.. +|+|.|+
T Consensus 5 ~pP~~~~~p~~~~-v~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 5 HPPEIIRKPQNQG-VRVGGVASFYCAAR--GDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCCEEEECCCCEE-EETTSCEEEEEEEE--CSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCCEEEcCCCceE-EecCCEEEEEEEEc--cCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 6788888777765 89999999999998 88889999999999987 4556665543 5557899999999 9999999
Q ss_pred EEEEeCcee-eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEE
Q psy2166 379 CRAWNKYGE-DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHF 457 (805)
Q Consensus 379 C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (805)
|.|.|..|. ....+.|.|...+..
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~------------------------------------------------------- 106 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKT------------------------------------------------------- 106 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCS-------------------------------------------------------
T ss_pred EEEEeCCCCeEEeeEEEEEecccCC-------------------------------------------------------
Confidence 999999988 677788887643210
Q ss_pred EEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCE
Q psy2166 458 EARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGK 537 (805)
Q Consensus 458 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~ 537 (805)
...+|.+...+.... +.+|+.++|.|.+. |.|.+.|+|+++|.
T Consensus 107 ----------------------------------~~~~p~~~~~~~~~~-~~~g~~v~l~C~~~--g~p~p~i~W~~~~~ 149 (212)
T 2yd1_A 107 ----------------------------------PAGFPVITQGPGTRV-IEVGHTVLMTCKAI--GNPTPNIYWIKNQT 149 (212)
T ss_dssp ----------------------------------CTTCCEEEECCCCEE-EETTCCEEECCEEE--CSSCCEEEEEETTE
T ss_pred ----------------------------------CCCCCeeEeCCCceE-eecCCeEEEEEEec--cCCCCeEEEEECCe
Confidence 023466666554443 88999999999998 77889999999999
Q ss_pred EccCC-CceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEE-EEEEEeeeee
Q psy2166 538 KLPHG-HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK-ASLKCVSKTN 593 (805)
Q Consensus 538 ~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~ 593 (805)
.+... .++.+ . ++ .|.|.++..+|+|.|+|.|.|..|..... +.|.|.....
T Consensus 150 ~~~~~~~~~~~-~-~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 150 KVDMSNPRYSL-K-DG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp ECCTTSTTEEE-E-TT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred EcccCCCeEEc-c-CC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 99763 34432 2 23 69999999999999999999999998765 7898887543
No 114
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.90 E-value=6.3e-22 Score=189.09 Aligned_cols=179 Identities=23% Similarity=0.317 Sum_probs=144.9
Q ss_pred CCeEEecCCCcccccC-CCeEEEEEEEeecCCCC--cEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEE
Q psy2166 303 PPKFTSHIKSLEGLKD-GDSAHFECTLTPVNDPE--LKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 379 (805)
Q Consensus 303 ~p~~~~~~~~~~~~~~-g~~~~l~C~~~~~~~p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 379 (805)
+|.+.... ... +.+ |+.++|.|.+. +.|. +.+.|+++|..+....... ....|.|.++..+|+|.|+|
T Consensus 3 ~P~i~~~~-~~~-v~~~G~~v~l~C~~~--~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C 73 (190)
T 2wv3_A 3 EPRIVTSE-EVI-IRDSLLPVTLQCNLT--SSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHC 73 (190)
T ss_dssp CCEEEECC-CEE-CCCSSSCEEEEEEEE--ECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEE
T ss_pred CCcccccc-eEE-EccCCceEEEEEEec--cCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEE
Confidence 56666533 222 556 99999999998 5554 8999999999987654332 34579999999999999999
Q ss_pred EEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEE
Q psy2166 380 RAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEA 459 (805)
Q Consensus 380 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (805)
.+.|. |.....+.|.|.
T Consensus 74 ~~~n~-~~~~~~~~l~V~-------------------------------------------------------------- 90 (190)
T 2wv3_A 74 VYHFV-SAPKANATIEVK-------------------------------------------------------------- 90 (190)
T ss_dssp EEEET-TEEEEEEEEEEE--------------------------------------------------------------
T ss_pred EEEeC-CcccccEEEEEe--------------------------------------------------------------
Confidence 99999 877777888774
Q ss_pred EEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEE--CCE
Q psy2166 460 RLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFY--NGK 537 (805)
Q Consensus 460 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~--~g~ 537 (805)
.+|.+...+.... +.+|+.++|.|.+. |.|.+.++|++ +|.
T Consensus 91 ----------------------------------~~p~~~~~~~~~~-~~~g~~v~l~C~~~--g~p~p~i~W~~~~~g~ 133 (190)
T 2wv3_A 91 ----------------------------------AAPDITGHKRSEN-KNEGQDAMMYCKSV--GYPHPEWMWRKKENGV 133 (190)
T ss_dssp ----------------------------------CCCEEEEECSEEE-EETTSCEEEEEEEE--CSSCCEEEEEEEETTE
T ss_pred ----------------------------------cCCcccccCCcce-eeCCCcEEEEEEeC--ccCCCceEEEEcCCCc
Confidence 3455555544433 88999999999998 78889999999 888
Q ss_pred Ecc---CCCceEEEeeCCEEEEEEccCC-CCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 538 KLP---HGHRYRTFHDFGIVILDILYCY-EENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 538 ~l~---~~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
.+. .+.++.+..++....|.|.++. .+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~V 190 (190)
T 2wv3_A 134 FEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVRV 190 (190)
T ss_dssp EEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred eeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEEC
Confidence 875 5667877777777889999999 6999999999999999999999998863
No 115
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.90 E-value=2.3e-22 Score=191.99 Aligned_cols=179 Identities=21% Similarity=0.365 Sum_probs=131.1
Q ss_pred eEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEE-CCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcC
Q psy2166 498 FITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFY-NGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNK 576 (805)
Q Consensus 498 ~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 576 (805)
|...+.+. .+.+|+.++|.|.+. +.|. .+.|++ +|..+....++.+..++....|.|.+++.+|+|.|+|.|.|.
T Consensus 5 ~~~~~~~~-~v~~G~~v~L~C~~~--~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (189)
T 2v44_A 5 VTISLSKV-ELSVGESKFFTCTAI--GEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDA 80 (189)
T ss_dssp EEESCSEE-EEETTCCEEEEEEEE--ECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred EEecCCce-EEecCCcEEEEEEee--cCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeC
Confidence 33444443 389999999999998 5566 999999 888888777777776666667777777777777777777776
Q ss_pred Ccce-EEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEE
Q psy2166 577 YGSD-VTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655 (805)
Q Consensus 577 ~g~~-~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 655 (805)
.|.. ...+.|.|.
T Consensus 81 ~g~~~~~~~~l~v~------------------------------------------------------------------ 94 (189)
T 2v44_A 81 KGQTQEATVVLEIY------------------------------------------------------------------ 94 (189)
T ss_dssp TSCEEEEEEEEEEE------------------------------------------------------------------
T ss_pred CCCcEEEEEEEEEe------------------------------------------------------------------
Confidence 6553 223333332
Q ss_pred EEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEc
Q psy2166 656 KASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI 735 (805)
Q Consensus 656 ~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l 735 (805)
.+|.+...+... .+.+|+.+.|.|.+. |.|.|.++|+|+|..+
T Consensus 95 ----------------------------------~~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~ 137 (189)
T 2v44_A 95 ----------------------------------QKLTFREVVSPQ-EFKQGEDAEVVCRVS--SSPAPAVSWLYHNEEV 137 (189)
T ss_dssp ----------------------------------CCCEEESCCCSE-EEETTSCEEECCEEE--CSSCCEEEEEEEC--C
T ss_pred ----------------------------------cCCceeecCCcE-EEeCCCCEEEEEEEC--cCCCCcEEEEECCcEE
Confidence 123333333444 678899999999999 9999999999999887
Q ss_pred cC--CCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 736 EA--SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 736 ~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
.. ..++.+..+ + .|.|.+++.+|+|.|+|.|.|..|.......++|.+
T Consensus 138 ~~~~~~~~~~~~~-~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 138 TTISDNRFAMLAN-N--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp EECCCTTEEECTT-S--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred eccCCCCEEEecC-C--cEEEEEcCcccCeEEEEEEEccccCceeeeeEEEEE
Confidence 63 455554333 3 699999999999999999999998887777776665
No 116
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.90 E-value=2.7e-23 Score=199.05 Aligned_cols=184 Identities=24% Similarity=0.364 Sum_probs=141.0
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCC-CceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHG-HRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
..+|.|...+... .+.+|++++|.|.+. +.|.+.+.|+++|..+... .++.
T Consensus 5 ~~~P~i~~~~~~~-~~~~G~~v~l~C~~~--~~p~~~i~W~~~~~~~~~~~~~~~------------------------- 56 (192)
T 2iep_A 5 PKAPVITTPLETV-DALVEEVATFMCAVE--SYPQPEISWTRNKILIKLFDTRYS------------------------- 56 (192)
T ss_dssp CEEEEESSCCCEE-EEETTSCEEEECCEE--EESCCEEEEEETTEECCTTCTTEE-------------------------
T ss_pred CCCceeecCccce-eeeCCCcEEEEeeCC--CCCCCeEEEEECCEEccccCccEE-------------------------
Confidence 4567666555543 489999999999998 5678899999999876421 1111
Q ss_pred EEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCc
Q psy2166 572 RATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG 651 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 651 (805)
+..++. .|.|.+++.+|+|.|+|.+.|..|
T Consensus 57 ------------------------------------------------~~~~~~--~L~i~~~~~~d~G~Y~C~~~~~~~ 86 (192)
T 2iep_A 57 ------------------------------------------------IRENGQ--LLTILSVEDSDDGIYCCTANNGVG 86 (192)
T ss_dssp ------------------------------------------------EEGGGT--EEEESSCCGGGCEEEEEEEECSSS
T ss_pred ------------------------------------------------EcCCcc--EEEEcCCCcccCeEEEEEEEcCCC
Confidence 111111 277888888888888888888877
Q ss_pred c-eEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEE
Q psy2166 652 S-DVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY 730 (805)
Q Consensus 652 ~-~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~ 730 (805)
. ....+.|.|.. +|.+...+... .+.+|+.+.|.|.+. |.|.+.++|++
T Consensus 87 ~~~~~~~~l~v~~---------------------------~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~~~v~W~~ 136 (192)
T 2iep_A 87 GAVESCGALQVKM---------------------------KPKITRPPINV-KIIEGLKAVLPCTTM--GNPKPSVSWIK 136 (192)
T ss_dssp CCEEEEEEEEEEE---------------------------EEEEEECCCCE-EEETTSCEEECCEEE--EESCCEEEEEE
T ss_pred ceeEeEEEEEEEe---------------------------CCccccCCcce-EEeCCCcEEEEEEEe--ccCCceEEEEe
Confidence 7 44566777774 45666666666 899999999999998 89999999999
Q ss_pred CCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccE-EEEEEEEEEEe
Q psy2166 731 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA-EISVNLECVVW 787 (805)
Q Consensus 731 ~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 787 (805)
+|..+....++.+..++ .|.|.++..+|+|.|+|.|.|..|.. +.++.|.|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 137 GDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp TTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred CCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 99999888877654433 59999999999999999999999987 45688888654
No 117
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.90 E-value=2.4e-22 Score=192.92 Aligned_cols=186 Identities=16% Similarity=0.214 Sum_probs=136.9
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc--eEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR--YRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
++|.|...+.+.. +.+|++++|.|.+.. +.|.+.++|+|||..+..... +.+... ....+.|..
T Consensus 1 e~~~~~~~p~~~~-v~~G~~v~l~C~~~~-~~p~~~v~W~~~g~~l~~~~~~~~~~~~~------------~~~~~~~~~ 66 (195)
T 2c5d_C 1 EESPFVGNPGNIT-GARGLTGTLRCQLQV-QGEPPEVHWLRDGQILELADSTQTQVPLG------------EDEQDDWIV 66 (195)
T ss_dssp -CCSEEECCCCEE-ECTTCCEEEEEEEEE-ESSCCCCEEEETTEECCSCEEEEEEEECS------------SSTTSEEEE
T ss_pred CCCeeccChhheE-EecCCcEEEeccccc-CCCCcEEEEEECCEEcccCCCCceEEEEc------------cccccceee
Confidence 3688888777765 999999999999983 357779999999999876521 211110 111122221
Q ss_pred EEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCc
Q psy2166 572 RATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG 651 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 651 (805)
. ..|.|.+++.+|+|.|+|.|.|..|
T Consensus 67 ~------------------------------------------------------~~L~i~~~~~~d~G~Y~C~~~~~~~ 92 (195)
T 2c5d_C 67 V------------------------------------------------------SQLRITSLQLSDTGQYQCLVFLGHQ 92 (195)
T ss_dssp E------------------------------------------------------EEEEESSCCSTTCEEEEEEEEETTE
T ss_pred c------------------------------------------------------cEEEEEeccccCCcEEEEEEEeCCC
Confidence 0 0166677777777777777777666
Q ss_pred ceEEE-EEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCe-EEEEE
Q psy2166 652 SDVTK-ASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFL 729 (805)
Q Consensus 652 ~~~~~-~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~ 729 (805)
..... +.|.|. .+|.|...+.+. .+.+|+.+.|.|.+. |.|.| .|.|+
T Consensus 93 ~~~~~~~~l~V~---------------------------~~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~~v~W~ 142 (195)
T 2c5d_C 93 TFVSQPGYVGLE---------------------------GLPYFLEEPEDR-TVAANTPFNLSCQAQ--GPPEPVDLLWL 142 (195)
T ss_dssp EEECCCEEEEEC---------------------------CSCEEEECCCCE-EECTTCCEEEEEEEE--CSSCCCEEEEE
T ss_pred ceecccEEEEEe---------------------------cCCeEEcCCCcE-EEcCCCEEEEEeECC--CCCCCCEEEEE
Confidence 54433 566665 467777777777 899999999999998 99999 99999
Q ss_pred ECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEE-EEEEEEE
Q psy2166 730 YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLEC 784 (805)
Q Consensus 730 ~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V 784 (805)
|+|..+...... .....|.|.++. |+|.|+|.|.|.+|... .++.|.|
T Consensus 143 ~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 143 QDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp ESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 999998876543 233479999998 89999999999999886 7888888
No 118
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=4e-22 Score=194.24 Aligned_cols=197 Identities=21% Similarity=0.300 Sum_probs=152.7
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIK 395 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 395 (805)
...++.+.|.|.+.+ ..|.+.+.|+++|..+....++.+...+....|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 14 ~c~~~~~~l~C~~~~-~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTY-YVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSS-CCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EEcCceEEEEEEEec-cCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 346788899999872 2568999999999999988888888888888899999999999999999999888877766665
Q ss_pred EEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEee
Q psy2166 396 CFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFS 475 (805)
Q Consensus 396 V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 475 (805)
|......+ .....+...
T Consensus 93 v~~~~~~~---------~~~~~~~~~------------------------------------------------------ 109 (212)
T 2r15_A 93 GQAYDEAY---------AEFQRLKQA------------------------------------------------------ 109 (212)
T ss_dssp HHHHHHHH---------HHHHHHHHH------------------------------------------------------
T ss_pred Eeeccchh---------hhccccCcc------------------------------------------------------
Confidence 43211000 000000000
Q ss_pred cccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEee-CCEE
Q psy2166 476 NFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHD-FGIV 554 (805)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~ 554 (805)
......+|.+....+....+.+|+.++|.|.+. |.|.|.+.|+|+|..+..+.++.+... ++..
T Consensus 110 -------------~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~ 174 (212)
T 2r15_A 110 -------------AIAEKNRARVLGGLPDVVTIQEGKALNLTCNVW--GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174 (212)
T ss_dssp -------------HHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEE--CSSCCEEEEEETTEEECCCSSEEEEEETTTEE
T ss_pred -------------cccccCCCcccccCCCcEEEccCCeEEEEEEEc--CCCCceEEEEECCeECccCCCEEEEEcCCCEE
Confidence 000022455555555555689999999999999 789999999999999998888887666 6678
Q ss_pred EEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeee
Q psy2166 555 ILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSK 591 (805)
Q Consensus 555 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 591 (805)
.|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 175 ~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 8999999999999999999999999999999988754
No 119
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.90 E-value=5.5e-22 Score=189.91 Aligned_cols=182 Identities=21% Similarity=0.326 Sum_probs=147.0
Q ss_pred CCeEEecCC-CCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 65 KPVFIVPLK-PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 65 ~p~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
+|.+..... .++.+.+|+.++|.|.+. +.|.+.|.|+|+|..+....++.+..++. +|.|.+++.+|+|.|+|.+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~ 77 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRAS--GSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRA 77 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEE--CSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeec--cCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEE
Confidence 577766543 257889999999999998 67888999999999999888887765544 7999999999999999999
Q ss_pred EeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEE
Q psy2166 144 WNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHF 223 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l 223 (805)
.+..|.......|.|..++. +..... . .+.+|+.++|
T Consensus 78 ~~~~~~~~~~~~l~V~~~p~-----------------------------------------~~~~~~-~-~~~~g~~v~l 114 (192)
T 2va4_A 78 TNKAGEDEKQAFLQVFVQPH-----------------------------------------IIQLKN-E-TTYENGQVTL 114 (192)
T ss_dssp EETTEEEEEEEEEEEEEEEE-----------------------------------------EEEECC-E-EECTTSEEEE
T ss_pred EccccccceEEEEEEEccCc-----------------------------------------ccccCc-c-eEEeCCeEEE
Confidence 99998888888888865432 221111 1 3567999999
Q ss_pred EEEEeeCCCCCeEEEEEEC--CEEccC-----CCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEE
Q psy2166 224 EASLIPVGDQTMTVEFLYN--GKPIEA-----SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 224 ~C~~~~~~~p~~~i~W~k~--g~~l~~-----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 295 (805)
.|.+ .+.|.+.+.|+++ +..+.. ..++......+...|.|.+++.+|+|.|+|.|.|..|..+.++.|.|
T Consensus 115 ~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 115 VCDA--EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEE--EEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEe--cCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEe
Confidence 9998 5678899999998 666653 34555555566789999999999999999999999999888888876
No 120
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.90 E-value=2.8e-23 Score=199.10 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=121.4
Q ss_pred CCCeEEEEECCEEcc-----------------CCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEE
Q psy2166 599 QLPEVEWFYNGKKLP-----------------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~-----------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 661 (805)
|.|.++|+|+|..+. ...++.+..+++...|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 24 p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (203)
T 4fa8_A 24 PEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSV 103 (203)
T ss_dssp TTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEe
Confidence 778999999873221 123456666777889999999999999999999999999999999999
Q ss_pred eeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEc----cC
Q psy2166 662 VSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI----EA 737 (805)
Q Consensus 662 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l----~~ 737 (805)
. .||.+...+.+. .+.+|+.++|.|.+. |.|.|.|+|++++..+ ..
T Consensus 104 ~---------------------------~p~~~~~~~~~~-~v~~g~~~~l~C~~~--G~P~P~v~W~~~~~~~~~~~~~ 153 (203)
T 4fa8_A 104 V---------------------------KPLTLSVHSERS-QFPDFSVLTVTCTVN--AFPHPHVQWLMPEGVEPAPTAA 153 (203)
T ss_dssp E---------------------------EEEEEEEEEEEC-CSSCSCCEEEEEEEE--EESCCEEEECCC----------
T ss_pred c---------------------------CCceeeecceeE-EEcCCCEEEEEEEcC--CCCCCEEEEEECCeeecCcccc
Confidence 7 367777777777 899999999999999 9999999999876433 23
Q ss_pred CCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEE
Q psy2166 738 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 779 (805)
Q Consensus 738 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 779 (805)
+.++.+..++....|.|.+++.+|+|.|+|.|+|.+|+++..
T Consensus 154 ~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 154 NGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp --CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred cceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 456666666666678889999999999999999999988753
No 121
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.90 E-value=2.4e-22 Score=191.81 Aligned_cols=183 Identities=23% Similarity=0.394 Sum_probs=130.7
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccC--CCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPH--GHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
+|.|...+.+.. +.+|++++|.|.+. +.|.+.+.|+++|..+.. ..++....++ .|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~~~~~~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVVSPQE-FKQGEDAEVVCRVS--SSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCE 75 (189)
T ss_dssp CCEEEECCSSEE-EETTSCEEECCEEE--CSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEE
T ss_pred CceeeccCCCEE-EeCCCcEEEEEEEc--CCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEE
Confidence 577777777665 89999999999998 678889999999988753 3344433222 377777777777777777
Q ss_pred EEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcc
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 652 (805)
+.|..+.......
T Consensus 76 ~~~~~~~~~~~~~------------------------------------------------------------------- 88 (189)
T 2v5t_A 76 GRVEARGEIDFRD------------------------------------------------------------------- 88 (189)
T ss_dssp EEETTTTEEEEEE-------------------------------------------------------------------
T ss_pred EEEcCCCceEEEE-------------------------------------------------------------------
Confidence 7766543322111
Q ss_pred eEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCC--cccccCCCCeEEEEEEEeecCCCCeEEEEEE
Q psy2166 653 DVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQ--HLSNLSEGEIAHFEASLIPVGDQTMTVEFLY 730 (805)
Q Consensus 653 ~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~--~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~ 730 (805)
+.|.|.. +|.+...+. .. .+.+|+.+.|.|.+. |.|.|.|.|++
T Consensus 89 ----~~l~v~~---------------------------~p~~~~~~~~~~~-~~~~g~~v~l~C~~~--g~p~~~v~W~~ 134 (189)
T 2v5t_A 89 ----IIVIVNV---------------------------PPAISMPQKSFNA-TAERGEEMTFSCRAS--GSPEPAISWFR 134 (189)
T ss_dssp ----EEEEEEE---------------------------EEEEECSCCEEEE-ETTSCCCEEEECEEE--EESCCEEEEEE
T ss_pred ----EEEEecC---------------------------CCCcccccccccc-cccCCCcEEEEEEEc--cCCCCeEEEEE
Confidence 1122221 111111111 22 678899999999998 88999999999
Q ss_pred CCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 731 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 731 ~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
+|..+....++.+..+.+ .|.|.++..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 135 ~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 135 NGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp TTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEECcCCCcEEEecCCC--EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 999999888877655454 799999999999999999999999999999999975
No 122
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=4.5e-22 Score=190.35 Aligned_cols=183 Identities=20% Similarity=0.297 Sum_probs=140.1
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCC-CcEEEEEE-CCEEccCC-CceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDP-DLVVEWFY-NGKKLPHG-HRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p-~~~v~W~~-~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
++.|...+.+.. +.+|++++|.|.+. +.| .+.++|++ +|..+... .++.+
T Consensus 2 p~~v~~~p~~~~-v~~G~~v~l~C~~~--~~~~~~~v~W~~~~g~~~~~~~~~~~~------------------------ 54 (191)
T 1epf_A 2 VLQVDIVPSQGE-ISVGESKFFLCQVA--GDAKDKDISWFSPNGEKLSPNQQRISV------------------------ 54 (191)
T ss_dssp -CCEEEESSSEE-EETTCCEEEEEEEC--CCSCCCEEEEECTTSCEECCBSSSEEE------------------------
T ss_pred ceEEEecCCCcE-EcCCCCEEEEEECC--CCCCCceEEEEeCCCccccCCCCeEEE------------------------
Confidence 456666666654 89999999999998 444 88999999 77655321 11100
Q ss_pred EEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCC-
Q psy2166 572 RATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY- 650 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~- 650 (805)
...++....|.|.++..+|+|.|+|.|.|..
T Consensus 55 ------------------------------------------------~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 86 (191)
T 1epf_A 55 ------------------------------------------------VWNDDDSSTLTIYNANIDDAGIYKCVVTAEDG 86 (191)
T ss_dssp ------------------------------------------------EEEETTEEEEEECSCCGGGCEEEEEEEEETTT
T ss_pred ------------------------------------------------EECCCCceEEEEccCCcccCEEEEEEEEcCCC
Confidence 0001233458899999999999999999988
Q ss_pred cceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEE
Q psy2166 651 GSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY 730 (805)
Q Consensus 651 g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~ 730 (805)
+.....+.|.|. .+|.+...+... .+.+|+.+.|.|.+. |.|.|.|.|+|
T Consensus 87 ~~~~~~~~l~v~---------------------------~~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~~~v~W~~ 136 (191)
T 1epf_A 87 TQSEATVNVKIF---------------------------QKLMFKNAPTPQ-EFKEGEDAVIVCDVV--SSLPPTIIWKH 136 (191)
T ss_dssp EEEEEEEEEEEE---------------------------CCSEEEECCSSE-ECCTTSCEEECCEEE--CSSCCEEEEEE
T ss_pred cceEEEEEEEee---------------------------cCceEecCCCcE-eecCCCeEEEEEEEC--CCCCCEEEEEE
Confidence 555667777776 467777777777 899999999999999 99999999999
Q ss_pred CCEEccCC--CCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 731 NGKPIEAS--HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 731 ~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
+|..+... .++.+.. .+ .|.|.++..+|+|.|+|.|.|..|.......+.|.
T Consensus 137 ~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 137 KGRDVILKKDVRFIVLS-NN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp TTEEGGGGCCTTEEECT-TS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred CCEEeeccCCceEEEec-CC--eEEECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 99998754 3444333 33 69999999999999999999999877777777765
No 123
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.89 E-value=5.2e-23 Score=197.24 Aligned_cols=171 Identities=13% Similarity=0.055 Sum_probs=128.4
Q ss_pred CceecCCCcEEEEEEEecC-CCCCceEEEEECCEecC-----------------CCCceEEEecCcEEEEEEcccccCCC
Q psy2166 75 EFKLGEAQPLHLEAQVEPK-NDPNLKIEWIFNGKPLE-----------------LGSRFKTTADFGFVTLDLTEVYDRDQ 136 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~-~~p~~~v~W~k~g~~i~-----------------~~~~~~~~~~~~~~~L~I~~~~~~D~ 136 (805)
.+.+..|+.++|+|..... +.|.+.|+|+|+|..+. ...++.+..+++.++|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 4688999999999965321 67899999999874321 12356667777888999999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 137 GIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 137 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
|.|+|.|.|..|.......|.|..+ |.+...+... .+.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p-----------------------------------------~~~~~~~~~~-~v~ 119 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKP-----------------------------------------LTLSVHSERS-QFP 119 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEE-----------------------------------------EEEEEEEEEC-CSS
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCC-----------------------------------------ceeeecceeE-EEc
Confidence 9999999999999988888888643 3444444333 478
Q ss_pred CCceEEEEEEEeeCCCCCeEEEEEECCEEccC----CCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEE
Q psy2166 217 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA----SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI 289 (805)
Q Consensus 217 ~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~----~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~ 289 (805)
+|+.++|.|.+ .|.|.|.|+|++++..+.. ..++....++....|.|.+++.+|+|.|+|.|.|..|.++.
T Consensus 120 ~g~~~~l~C~~--~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 120 DFSVLTVTCTV--NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CSCCEEEEEEE--EEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CCCEEEEEEEc--CCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 99999999998 6889999999987654432 23333333333456677899999999999999999998864
No 124
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=3.1e-22 Score=199.39 Aligned_cols=199 Identities=20% Similarity=0.270 Sum_probs=129.9
Q ss_pred CCCCceEecC---CCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceE-EEeeCCEEEEEEccCCCCCCEE
Q psy2166 493 AEAPKFITQI---SDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGV 568 (805)
Q Consensus 493 ~~~P~~~~~~---~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~ 568 (805)
..+|.|..+. +....+.+|++++|.|.+. +.|.+.++|+|+|..+....+.. .........|.|.+++.+|+|.
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 86 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAA--GNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGN 86 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEE--CSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEE
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEec--CCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEE
Confidence 3566666543 3344588999999999999 67888999999999986543221 0111111235566665566666
Q ss_pred EEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEe
Q psy2166 569 YECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648 (805)
Q Consensus 569 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 648 (805)
|+|.|.|..|.....+.|.|
T Consensus 87 Y~C~~~~~~~~~~~~~~l~V------------------------------------------------------------ 106 (241)
T 3grw_A 87 YTCVVENKFGSIRQTYTLDV------------------------------------------------------------ 106 (241)
T ss_dssp EEEEEEETTEEEEEEEEEEE------------------------------------------------------------
T ss_pred EEEEEeecCCceEEEEEEEE------------------------------------------------------------
Confidence 66666555554444444443
Q ss_pred CCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeee-cCCcccccCCCCeEEEEEEEeecCCCCeEEE
Q psy2166 649 KYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTS-EFQHLSNLSEGEIAHFEASLIPVGDQTMTVE 727 (805)
Q Consensus 649 ~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~-~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~ 727 (805)
...+. .+|.+.. .+... .+.+|+.+.|.|.+. |.|.+.+.
T Consensus 107 -------------~~~~~-----------------------~~~~~~~~~~~~~-~~~~g~~v~L~C~~~--~~p~p~v~ 147 (241)
T 3grw_A 107 -------------LERSP-----------------------HRPILQAGLPANQ-TAVLGSDVEFHCKVY--SDAQPHIQ 147 (241)
T ss_dssp -------------ECCCC-----------------------CCCEEEECTTCSE-ECCTTCCEEEEEEEE--CSSCCEEE
T ss_pred -------------eccCC-----------------------CCceeecCCCccc-eecCCCEEEEEEEEe--cCCCCEEE
Confidence 32110 1222222 23444 788999999999998 99999999
Q ss_pred EEE----CCEEccCCCCeEEEe--------eCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEeCCCcc
Q psy2166 728 FLY----NGKPIEASHRIRTVH--------AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPSQT 792 (805)
Q Consensus 728 W~~----~g~~l~~~~~~~~~~--------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~~ 792 (805)
|++ +|..+..+....... ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...|+.+.
T Consensus 148 W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 148 WLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEE 224 (241)
T ss_dssp EEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--------
T ss_pred EEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCc
Confidence 999 888887664432211 11345799999999999999999999999999999999987665543
No 125
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.89 E-value=5.2e-22 Score=188.22 Aligned_cols=176 Identities=16% Similarity=0.239 Sum_probs=127.2
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCC--EEEEEEccCCCCCCEEEEEE
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFG--IVILDILYCYEENSGVYECR 572 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~ 572 (805)
+|.|...+.+.. +.+|++++|.|.+. +.|.+.+.|+|+|..+....+..+..++. ...
T Consensus 2 ~~~~~~~p~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~----------------- 61 (182)
T 1rhf_A 2 GLKLMGAPVKLT-VSQGQPVKLNCSVE--GMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF----------------- 61 (182)
T ss_dssp -----CCCEEEE-EETTCCEEEEEEEE--SCSSCCEEEEETTEECCSSEEEEEEEETTEEEEE-----------------
T ss_pred CCEEEeCCcceE-EeCCCcEEEEEEEe--CCCCCeEEEEECCeecCCCCceEEEecCCCceEE-----------------
Confidence 355555555543 89999999999999 67888999999999886654333222211 112
Q ss_pred EEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcc
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 652 (805)
|.|.+++.+|+|.|+|.|.|..|.
T Consensus 62 --------------------------------------------------------L~i~~~~~~d~G~Y~C~~~~~~~~ 85 (182)
T 1rhf_A 62 --------------------------------------------------------LSLKSVERSDAGRYWCQVEDGGET 85 (182)
T ss_dssp --------------------------------------------------------EEESSCCGGGCEEEEEEESSCTTC
T ss_pred --------------------------------------------------------EEEeecCcccCeEEEEEEEcCCCc
Confidence 566666666666666666666554
Q ss_pred e-EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCe-EEEEEE
Q psy2166 653 D-VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLY 730 (805)
Q Consensus 653 ~-~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~~ 730 (805)
. +..+.|.|. .+|.|...+... .+.+|+.+.|.|.+. |.|.| .++|++
T Consensus 86 ~~~~~~~l~V~---------------------------~~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~~v~W~~ 135 (182)
T 1rhf_A 86 EISQPVWLTVE---------------------------GVPFFTVEPKDL-AVPPNAPFQLSCEAV--GPPEPVTIVWWR 135 (182)
T ss_dssp EECCCEEEEEE---------------------------CSCEEEECCCCE-EECTTCCEEEEEEEE--CSSSCCEEEEEE
T ss_pred EEEEEEEEEEe---------------------------cCCeEEecCcce-EecCCCEEEEEeEec--CCCCCCEEEEEc
Confidence 2 245566665 467777777777 899999999999998 99999 999999
Q ss_pred CCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEE-EEEEEEE
Q psy2166 731 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI-SVNLECV 785 (805)
Q Consensus 731 ~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~~l~V~ 785 (805)
+|..+..... ....|.|.++ +|+|.|+|.|.|.+|.... ++.|.|+
T Consensus 136 ~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 136 GTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp TTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 9998865421 3347999998 5899999999999998864 8888773
No 126
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.88 E-value=2.3e-21 Score=186.10 Aligned_cols=178 Identities=15% Similarity=0.214 Sum_probs=140.3
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC--CceEEEecCc-------EEEEEEcccccCC
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG--SRFKTTADFG-------FVTLDLTEVYDRD 135 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~--~~~~~~~~~~-------~~~L~I~~~~~~D 135 (805)
+|.|+..+. +..+.+|+.++|.|.+.. +.|.+.|.|+|||..+... .++.+..... ..+|.|.+++.+|
T Consensus 2 ~~~~~~~p~-~~~v~~G~~v~l~C~~~~-~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 79 (195)
T 2c5d_C 2 ESPFVGNPG-NITGARGLTGTLRCQLQV-QGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSD 79 (195)
T ss_dssp CCSEEECCC-CEEECTTCCEEEEEEEEE-ESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTT
T ss_pred CCeeccChh-heEEecCCcEEEeccccc-CCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccC
Confidence 577776655 789999999999999982 3677899999999999877 3455544332 4689999999999
Q ss_pred CeEEEEEEEeCCeeEEEE-EEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 136 QGIYTCRAWNLAGETFTS-TTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 136 ~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
+|.|+|.+.|..|..... ..|.|.. +|.+...+... .
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~l~V~~-----------------------------------------~p~~~~~~~~~-~ 117 (195)
T 2c5d_C 80 TGQYQCLVFLGHQTFVSQPGYVGLEG-----------------------------------------LPYFLEEPEDR-T 117 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECC-----------------------------------------SCEEEECCCCE-E
T ss_pred CcEEEEEEEeCCCceecccEEEEEec-----------------------------------------CCeEEcCCCcE-E
Confidence 999999999988765444 6677753 34555444443 4
Q ss_pred cCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE-EEEE
Q psy2166 215 LSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVN 292 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~ 292 (805)
+.+|+.+.|.|.+ .+.|.+ .+.|+++|..+...... .....|.|.+++ |+|.|+|.|.|..|... ..+.
T Consensus 118 ~~~g~~~~l~C~~--~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~ 188 (195)
T 2c5d_C 118 VAANTPFNLSCQA--QGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTAT 188 (195)
T ss_dssp ECTTCCEEEEEEE--ECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEE
T ss_pred EcCCCEEEEEeEC--CCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEE
Confidence 7889999999998 678888 99999999988765442 334679999887 89999999999999885 6777
Q ss_pred EEE
Q psy2166 293 LEC 295 (805)
Q Consensus 293 l~v 295 (805)
|.|
T Consensus 189 l~V 191 (195)
T 2c5d_C 189 ITV 191 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 127
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.3e-21 Score=186.82 Aligned_cols=181 Identities=20% Similarity=0.337 Sum_probs=136.3
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCC--CCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLEL--GSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+|.|...+. ...+.+|+.++|.|.+. +.|.+.+.|+|++..+.. ..++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~~~~~~-~~~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVVS-PQEFKQGEDAEVVCRVS--SSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCE 75 (189)
T ss_dssp CCEEEECCS-SEEEETTSCEEECCEEE--CSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEE
T ss_pred CceeeccCC-CEEEeCCCcEEEEEEEc--CCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEE
Confidence 567766655 67999999999999998 678889999999988764 4566665554 699999999999999999
Q ss_pred EEeCCeeEE--EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccc-ccccCCCc
Q psy2166 143 AWNLAGETF--TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQH-LSNLSEGE 219 (805)
Q Consensus 143 a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~v~~g~ 219 (805)
+.+..+... ....+.|..++. +...... ...+.+|+
T Consensus 76 ~~~~~~~~~~~~~~~l~v~~~p~-----------------------------------------~~~~~~~~~~~~~~g~ 114 (189)
T 2v5t_A 76 GRVEARGEIDFRDIIVIVNVPPA-----------------------------------------ISMPQKSFNATAERGE 114 (189)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEE-----------------------------------------EECSCCEEEEETTSCC
T ss_pred EEEcCCCceEEEEEEEEecCCCC-----------------------------------------cccccccccccccCCC
Confidence 999864433 344455544332 2211111 12477899
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEe
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 296 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 296 (805)
.+.|.|.+ .+.|.+.+.|+++|..+....++.... ....|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 115 ~v~l~C~~--~g~p~~~v~W~~~g~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 115 EMTFSCRA--SGSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp CEEEECEE--EEESCCEEEEEETTEECCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cEEEEEEE--ccCCCCeEEEEECCEECcCCCcEEEec--CCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 99999998 567888999999999998777665433 23479999999999999999999999999888888875
No 128
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=2.9e-21 Score=184.30 Aligned_cols=169 Identities=22% Similarity=0.490 Sum_probs=135.1
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEE-CCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceee-EEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGED-FTRAT 393 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~ 393 (805)
+.+|+.++|.|.+. +.|. .+.|++ ++..+....++.+..++....|.|.++..+|+|.|+|.+.|..|.. ...+.
T Consensus 14 v~~G~~v~L~C~~~--~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~ 90 (189)
T 2v44_A 14 LSVGESKFFTCTAI--GEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVV 90 (189)
T ss_dssp EETTCCEEEEEEEE--ECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEE
T ss_pred EecCCcEEEEEEee--cCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEE
Confidence 78999999999998 5666 899999 8888888888888888878899999999999999999999998765 45566
Q ss_pred EEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEE
Q psy2166 394 IKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCEL 473 (805)
Q Consensus 394 l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 473 (805)
|.|.
T Consensus 91 l~v~---------------------------------------------------------------------------- 94 (189)
T 2v44_A 91 LEIY---------------------------------------------------------------------------- 94 (189)
T ss_dssp EEEE----------------------------------------------------------------------------
T ss_pred EEEe----------------------------------------------------------------------------
Confidence 6654
Q ss_pred eecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEcc--CCCceEEEeeC
Q psy2166 474 FSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLP--HGHRYRTFHDF 551 (805)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~--~~~~~~~~~~~ 551 (805)
.+|.+...+... .+.+|+.++|.|.+. |.|.|.++|+++|..+. .+.++.+..++
T Consensus 95 --------------------~~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~ 151 (189)
T 2v44_A 95 --------------------QKLTFREVVSPQ-EFKQGEDAEVVCRVS--SSPAPAVSWLYHNEEVTTISDNRFAMLANN 151 (189)
T ss_dssp --------------------CCCEEESCCCSE-EEETTSCEEECCEEE--CSSCCEEEEEEEC--CEECCCTTEEECTTS
T ss_pred --------------------cCCceeecCCcE-EEeCCCCEEEEEEEC--cCCCCcEEEEECCcEEeccCCCCEEEecCC
Confidence 334444333333 388999999999999 78888999999999885 34555554433
Q ss_pred CEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 552 GIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 552 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
.|.|.+++.+|+|.|+|.|.|..|.......+.|.
T Consensus 152 ---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 152 ---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp ---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred ---cEEEEEcCcccCeEEEEEEEccccCceeeeeEEEE
Confidence 59999999999999999999999887766665554
No 129
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.87 E-value=3.4e-22 Score=197.71 Aligned_cols=197 Identities=19% Similarity=0.276 Sum_probs=133.3
Q ss_pred CCCCceEecCC---CcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE-EeeCCEEEEEEccCCCCCCEE
Q psy2166 493 AEAPKFITQIS---DVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT-FHDFGIVILDILYCYEENSGV 568 (805)
Q Consensus 493 ~~~P~~~~~~~---~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~ 568 (805)
..+|.|...+. ....+.+|++++|.|.+. +.|.+.++|+|+|..+....++.. ....+...|.|.+++.+|+|.
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 90 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGN 90 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEE--EESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecc--cCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEE
Confidence 45677765541 334489999999999999 568889999999999865433210 111112246666666666666
Q ss_pred EEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEe
Q psy2166 569 YECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648 (805)
Q Consensus 569 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 648 (805)
|+|.|.|..|.....+.|.|...+.
T Consensus 91 Y~C~~~n~~~~~~~~~~l~V~~~~~------------------------------------------------------- 115 (231)
T 3ojm_B 91 YTCVVENEYGSINHTYHLDVVERSR------------------------------------------------------- 115 (231)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCC-------------------------------------------------------
T ss_pred EEEEEecccCcccccEEEEEEcCCC-------------------------------------------------------
Confidence 6666666655554444444432111
Q ss_pred CCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeee-cCCcccccCCCCeEEEEEEEeecCCCCeEEE
Q psy2166 649 KYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTS-EFQHLSNLSEGEIAHFEASLIPVGDQTMTVE 727 (805)
Q Consensus 649 ~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~-~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~ 727 (805)
.+|.+.. .+... .+.+|+.+.|.|.+. |.|.+.+.
T Consensus 116 -----------------------------------------~~p~~~~~~~~~~-~~~~g~~~~l~C~~~--~~p~p~v~ 151 (231)
T 3ojm_B 116 -----------------------------------------HRPILQAGLPANA-STVVGGDVEFVCKVY--SDAQPHIQ 151 (231)
T ss_dssp -----------------------------------------CCCEECTTCSCCE-EEETTCCEEEECCEE--CSSCCEEE
T ss_pred -----------------------------------------CCCceeeccCCce-EEEeCCcEEEEEEEe--cCCCCEEE
Confidence 1222222 23334 788999999999999 99999999
Q ss_pred EEE----CCEEccCCCCeEE--EeeC-----cEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEEeCCC
Q psy2166 728 FLY----NGKPIEASHRIRT--VHAF-----GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 728 W~~----~g~~l~~~~~~~~--~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
|++ +|..+..+..... .... ....|.|.++..+|+|.|+|.|.|..|..+.++.|.|...|.+
T Consensus 152 W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 152 WIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp EEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred EEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 999 8887765543221 1111 1236999999999999999999999999999999999765443
No 130
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.87 E-value=4.5e-22 Score=194.66 Aligned_cols=188 Identities=27% Similarity=0.402 Sum_probs=137.5
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc--eEEEeeCCEEEEEEccCCCCCCEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR--YRTFHDFGIVILDILYCYEENSGVYE 570 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~--~~~~~~~~~~~L~i~~v~~~d~G~Y~ 570 (805)
..+|.|...+.... +.+|+.++|.|.+. +.|.+.|.|+|+|..+..... ..+...++
T Consensus 7 ~~~P~i~~~p~~~~-v~~G~~v~L~C~~~--g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~------------------ 65 (217)
T 2vr9_A 7 YQSPRIIEHPTDLV-VKKNEPATLNCKVE--GKPEPTIEWFKDGEPVSTNEKKSHRVQFKDG------------------ 65 (217)
T ss_dssp CCCCEEEECCCCEE-ECTTSCEEECCEEE--CSSCCEEEEEETTEECCCSSSSSSEEECTTS------------------
T ss_pred cCCCEEecCCCceE-EeCCCcEEEEEEcC--CCCCCeEEEEECCcCccCCCccceeEEecCC------------------
Confidence 57888888876654 89999999999998 778889999999988754311 00000000
Q ss_pred EEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCC
Q psy2166 571 CRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650 (805)
Q Consensus 571 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 650 (805)
.. ...|.|.+++.+|+|.|+|.|.|..
T Consensus 66 ----------------------------------------------~~-------~~~l~i~~v~~~d~G~Y~C~~~n~~ 92 (217)
T 2vr9_A 66 ----------------------------------------------AL-------FFYRTMQGKKEQDGGEYWCVAKNRV 92 (217)
T ss_dssp ----------------------------------------------CE-------EESSCCBSSSCBCCEEEEEEEEETT
T ss_pred ----------------------------------------------ce-------EEEEEeccCCcccCceEEEEEecCC
Confidence 00 0114566777888888888888877
Q ss_pred cceE-EEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEE-eecCCCCeEEEE
Q psy2166 651 GSDV-TKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASL-IPVGDQTMTVEF 728 (805)
Q Consensus 651 g~~~-~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~-~~~g~p~~~v~W 728 (805)
|... ..+.|.|.. .+|.+...+... .+.+|+.+.|.|.+ . |.|.|.|+|
T Consensus 93 g~~~~~~~~l~v~~--------------------------~~~~~~~~~~~~-~~~~g~~v~l~C~~~~--g~p~~~v~W 143 (217)
T 2vr9_A 93 GQAVSRHASLQIAV--------------------------LRDDFRVEPKDT-RVAKGETALLECGPPK--GIPEPTLIW 143 (217)
T ss_dssp EEEECCCEEEEECE--------------------------ECCSCSBCCCCE-EECTTSCEEECCBCCC--EESCCEEEE
T ss_pred CccccccceEEEEE--------------------------eCCCcEECCCcc-EEcCCCeEEEEEECCC--CCCCCeEEE
Confidence 7653 355666654 234455555566 88999999999998 6 889999999
Q ss_pred EECCEEccC--------CCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 729 LYNGKPIEA--------SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 729 ~~~g~~l~~--------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
+|+|..+.. ..++.+. ..+ .|.|.+++.+|+|.|+|.|.|.+|....++.+.|..
T Consensus 144 ~~~g~~~~~~~~~~~~~~~~~~~~-~~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 144 IKDGVPLDDLKAMSFGASSRVRIV-DGG--NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp EETTEEECCCCCC---CCCSEEEE-TTT--EEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred EECCcCCCcccccccccCCcEEec-CCC--cEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEE
Confidence 999999873 3344332 233 699999999999999999999999988887776654
No 131
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.87 E-value=5.2e-22 Score=190.09 Aligned_cols=183 Identities=22% Similarity=0.335 Sum_probs=141.3
Q ss_pred CCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccC-CCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 303 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH-KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 303 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+|.+...+... .+.+|+.++|.|.+. +.|.+.+.|++++..+.. ..++.+..++. .|.|.++..+|+|.|+|.+
T Consensus 7 ~P~i~~~~~~~-~~~~G~~v~l~C~~~--~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 7 APVITTPLETV-DALVEEVATFMCAVE--SYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp EEEESSCCCEE-EEETTSCEEEECCEE--EESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEEE
T ss_pred CceeecCccce-eeeCCCcEEEEeeCC--CCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEEE
Confidence 45554444433 388999999999997 678889999999999875 44555554444 6999999999999999999
Q ss_pred EeCcee-eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGE-DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..|. ......+.|..
T Consensus 82 ~~~~~~~~~~~~~l~v~~-------------------------------------------------------------- 99 (192)
T 2iep_A 82 NNGVGGAVESCGALQVKM-------------------------------------------------------------- 99 (192)
T ss_dssp ECSSSCCEEEEEEEEEEE--------------------------------------------------------------
T ss_pred EcCCCceeEeEEEEEEEe--------------------------------------------------------------
Confidence 998877 34556666643
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEcc
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLP 540 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~ 540 (805)
+|.+...+... .+.+|+.++|.|.+. |.|.+.++|+++|..+.
T Consensus 100 ----------------------------------~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~~~v~W~~~~~~~~ 142 (192)
T 2iep_A 100 ----------------------------------KPKITRPPINV-KIIEGLKAVLPCTTM--GNPKPSVSWIKGDSALR 142 (192)
T ss_dssp ----------------------------------EEEEEECCCCE-EEETTSCEEECCEEE--EESCCEEEEEETTEECC
T ss_pred ----------------------------------CCccccCCcce-EEeCCCcEEEEEEEe--ccCCceEEEEeCCEEcc
Confidence 23344333333 378999999999998 66888999999999998
Q ss_pred CCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcce-EEEEEEEEeeee
Q psy2166 541 HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD-VTKASLKCVSKT 592 (805)
Q Consensus 541 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~ 592 (805)
.+.++.+..++ .|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..+|
T Consensus 143 ~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 143 ENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 87777655444 49999999999999999999999988 456888887654
No 132
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.87 E-value=9.4e-21 Score=181.10 Aligned_cols=181 Identities=18% Similarity=0.322 Sum_probs=139.0
Q ss_pred CeEEecCCCcccccCCCeEEEEEEEeecCCC-CcEEEEEE-CCEEcc-CCCceEEEEe-CcEEEEEEcccCcCCceEEEE
Q psy2166 304 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDP-ELKVEWFH-NGKPIF-HKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVC 379 (805)
Q Consensus 304 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p-~~~v~W~~-~g~~l~-~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y~C 379 (805)
+.+...+.+.. +.+|+.++|.|.+. +.+ .+.+.|++ +|..+. ...++.+... .....|.|.++..+|+|.|+|
T Consensus 3 ~~v~~~p~~~~-v~~G~~v~l~C~~~--~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (191)
T 1epf_A 3 LQVDIVPSQGE-ISVGESKFFLCQVA--GDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (191)
T ss_dssp CCEEEESSSEE-EETTCCEEEEEEEC--CCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred eEEEecCCCcE-EcCCCCEEEEEECC--CCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEE
Confidence 34444455544 88999999999997 555 78999999 888876 4456655443 566789999999999999999
Q ss_pred EEEeCc-eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEE
Q psy2166 380 RAWNKY-GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 458 (805)
Q Consensus 380 ~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (805)
.+.|.. +.....+.|.|.
T Consensus 80 ~~~~~~~~~~~~~~~l~v~------------------------------------------------------------- 98 (191)
T 1epf_A 80 VVTAEDGTQSEATVNVKIF------------------------------------------------------------- 98 (191)
T ss_dssp EEEETTTEEEEEEEEEEEE-------------------------------------------------------------
T ss_pred EEEcCCCcceEEEEEEEee-------------------------------------------------------------
Confidence 999998 555555666653
Q ss_pred EEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEE
Q psy2166 459 ARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKK 538 (805)
Q Consensus 459 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~ 538 (805)
.+|.+...+.... +.+|+.++|.|.+. |.|.+.++|+++|..
T Consensus 99 -----------------------------------~~p~~~~~~~~~~-~~~g~~~~l~C~~~--g~p~~~v~W~~~~~~ 140 (191)
T 1epf_A 99 -----------------------------------QKLMFKNAPTPQE-FKEGEDAVIVCDVV--SSLPPTIIWKHKGRD 140 (191)
T ss_dssp -----------------------------------CCSEEEECCSSEE-CCTTSCEEECCEEE--CSSCCEEEEEETTEE
T ss_pred -----------------------------------cCceEecCCCcEe-ecCCCeEEEEEEEC--CCCCCEEEEEECCEE
Confidence 3455555444443 88999999999999 788999999999999
Q ss_pred ccC--CCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 539 LPH--GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 539 l~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
+.. +.++....++ .|.|.++..+|+|.|+|.|.|..|.......+.|.
T Consensus 141 ~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 141 VILKKDVRFIVLSNN---YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp GGGGCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred eeccCCceEEEecCC---eEEECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 863 3355444333 49999999999999999999999877766666654
No 133
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=192.77 Aligned_cols=192 Identities=22% Similarity=0.303 Sum_probs=145.0
Q ss_pred CCCeEEecC---CCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCce---EEEecCcEEEEEEcccccCCCe
Q psy2166 64 AKPVFIVPL---KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRF---KTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 64 ~~p~~~~~~---~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~---~~~~~~~~~~L~I~~~~~~D~G 137 (805)
.+|.|+.+. +..+.+.+|+.++|.|.+. +.|.+.|.|+|+|..+....++ .... ...+|.|.+++.+|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~G 85 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAA--GNPTPSISWLKNGREFRGEHRIGGIKLRH--QQWSLVMESVVPSDRG 85 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEE--CSSCCEEEEEETTEECCGGGSTTCCEEEG--GGTEEEECSCCGGGCE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEec--CCCCceeEEEECCcccCCCCcccceeeec--cceEEEEEeCCcccCE
Confidence 467776553 3457899999999999998 6788899999999998765432 2322 2337999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.+.|..|.......|.|..... .+|.+.........+.+
T Consensus 86 ~Y~C~~~~~~~~~~~~~~l~V~~~~~-------------------------------------~~~~~~~~~~~~~~~~~ 128 (241)
T 3grw_A 86 NYTCVVENKFGSIRQTYTLDVLERSP-------------------------------------HRPILQAGLPANQTAVL 128 (241)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCC-------------------------------------CCCEEEECTTCSEECCT
T ss_pred EEEEEEeecCCceEEEEEEEEeccCC-------------------------------------CCceeecCCCccceecC
Confidence 99999999999888888888865321 22444433333335789
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEE----CCEEccCCCcEEE-EE-------EcCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLY----NGKPIEASHRIRT-VH-------AFGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k----~g~~l~~~~~~~~-~~-------~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
|+.+.|.|.+ .+.|.+.+.|++ +|..+........ .. ......|.|.+++.+|+|.|+|.|.|..|
T Consensus 129 g~~v~L~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g 206 (241)
T 3grw_A 129 GSDVEFHCKV--YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIG 206 (241)
T ss_dssp TCCEEEEEEE--ECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCEEEEEEEE--ecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcc
Confidence 9999999998 678889999999 8887765432211 11 11356899999999999999999999999
Q ss_pred eEEEEEEEEEecc
Q psy2166 286 QAEISVNLECVDK 298 (805)
Q Consensus 286 ~~~~~~~l~v~~~ 298 (805)
..+.++.|.|...
T Consensus 207 ~~~~~~~l~V~~~ 219 (241)
T 3grw_A 207 VAEKAFWLSVHGP 219 (241)
T ss_dssp EEEEEEEEEC---
T ss_pred eEEEEEEEEecCC
Confidence 9999999988753
No 134
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.87 E-value=7.2e-22 Score=192.43 Aligned_cols=193 Identities=22% Similarity=0.323 Sum_probs=137.9
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
..+|.|...+.+.. +.+|++++|.|.+. +.|.+.++|+++|..+...... .....
T Consensus 7 ~~pp~i~~~p~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~--------------------~~~~~-- 61 (212)
T 2v9r_A 7 DFPPRIVEHPSDLI-VSKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDD--------------------PRSHR-- 61 (212)
T ss_dssp CEEEEEEECCCCEE-ECTTCCEEECCEEE--EESCCEEEEEETTEECCCTTTC--------------------TTCSE--
T ss_pred cCCcceecCCCceE-EeCCCcEEEEEEcC--CCCCCEEEEEECCEEeeccccc--------------------cccce--
Confidence 46788887776654 89999999999998 6688899999999877543200 00000
Q ss_pred EEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcc
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 652 (805)
....+....+ ..|.|.++..+|+|.|+|.|.|..|.
T Consensus 62 --------------------------------------~~~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~n~~g~ 97 (212)
T 2v9r_A 62 --------------------------------------MLLPSGSLFF------LRIVHGRKSRPDEGVYVCVARNYLGE 97 (212)
T ss_dssp --------------------------------------EECTTSCEEE------SSCCCCSSCCCSCEEEEEEEEETTEE
T ss_pred --------------------------------------EEecCCcEEE------EEEEecCCCcccCeEEEEEEECCCCc
Confidence 0000000000 01556677888888888888888776
Q ss_pred e-EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEE-eecCCCCeEEEEEE
Q psy2166 653 D-VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASL-IPVGDQTMTVEFLY 730 (805)
Q Consensus 653 ~-~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~-~~~g~p~~~v~W~~ 730 (805)
. ...+.|.|.. .+|.+...+.+. .+.+|+.+.|.|.+ . |.|.+.++|+|
T Consensus 98 ~~~~~~~l~V~~--------------------------~~~~~~~~~~~~-~~~~g~~~~l~C~~~~--~~p~~~v~W~~ 148 (212)
T 2v9r_A 98 AVSHDASLEVAI--------------------------LRDDFRQNPSDV-MVAVGEPAVMECQPPR--GHPEPTISWKK 148 (212)
T ss_dssp EECCCEEEEECE--------------------------ECSSCSBCCCCE-EEETTSCEEEECBCCC--EESCCEEEEEE
T ss_pred eeecceEEEEEe--------------------------ccccceeCCCce-EecCCCcEEEEEecCC--CCCCCEEEEEE
Confidence 5 3456677664 234444555566 88999999999998 6 88999999999
Q ss_pred CCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEE-EEEEEEE
Q psy2166 731 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS-VNLECVV 786 (805)
Q Consensus 731 ~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~-~~l~V~~ 786 (805)
+|..+......... .++ .|.|.++..+|+|.|+|.|.|.+|..... +.|.|..
T Consensus 149 ~~~~l~~~~~~~~~-~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 149 DGSPLDDKDERITI-RGG--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp TTEEECTTSTTEEE-ETT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCccCCCCcceEEc-cCC--eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 99998876543323 334 69999999999999999999999987654 7888864
No 135
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=5.9e-21 Score=180.93 Aligned_cols=175 Identities=18% Similarity=0.253 Sum_probs=134.2
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCc--EEEEEEcccccCCCeEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFG--FVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~--~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+|.|...+. ++.+.+|+.++|.|.+. +.|.+.|.|+|++..+....++.+..++. ..+|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~~~~p~-~~~v~~G~~v~l~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 2 GLKLMGAPV-KLTVSQGQPVKLNCSVE--GMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp -----CCCE-EEEEETTCCEEEEEEEE--SCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCc-ceEEeCCCcEEEEEEEe--CCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEE
Confidence 345554443 68899999999999999 68888999999999998877666555432 46899999999999999999
Q ss_pred EEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 143 AWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 143 a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
+.|..|.. .....|.|.. +|.+...+... .+.+|+.+
T Consensus 79 ~~~~~~~~~~~~~~l~V~~-----------------------------------------~p~~~~~~~~~-~~~~g~~~ 116 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVEG-----------------------------------------VPFFTVEPKDL-AVPPNAPF 116 (182)
T ss_dssp ESSCTTCEECCCEEEEEEC-----------------------------------------SCEEEECCCCE-EECTTCCE
T ss_pred EEcCCCcEEEEEEEEEEec-----------------------------------------CCeEEecCcce-EecCCCEE
Confidence 99986643 3466777753 34444444443 47899999
Q ss_pred EEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE-EEEEEEE
Q psy2166 222 HFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLEC 295 (805)
Q Consensus 222 ~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v 295 (805)
.|.|.+ .+.|.+ .+.|+++|..+..... ....|.|.++ +|+|.|+|.|.|..|... ..+.|.|
T Consensus 117 ~l~C~~--~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 117 QLSCEA--VGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEEEE--ECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEeEe--cCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 999998 688888 9999999998865422 3468999988 589999999999999875 3666654
No 136
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=1.4e-21 Score=196.24 Aligned_cols=208 Identities=17% Similarity=0.229 Sum_probs=125.8
Q ss_pred CCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC-----CcEEEEEE
Q psy2166 268 TKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP-----ELKVEWFH 342 (805)
Q Consensus 268 ~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p-----~~~v~W~~ 342 (805)
++.+|+|.|+|.|. |.......+.+. .++.+...+... .+.+|+.++|.|.+. +.+ .+.|.|+|
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~-----~~~~~~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k 79 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWL-----RELVMTQSPLTL-SVTIGQPASISCKSS--QSLLYSNGKTYLNWLL 79 (254)
T ss_dssp -----------------------------------CCCEEEECSEE-EECTTSCEEEEEEES--SCCBCSSSCBCEEEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhee-----eceeEEeCCceE-EecCCCcEEEEeecc--CcccccCCCCceEEEE
Confidence 68899999999998 333333333332 245555444444 388999999999997 666 48999998
Q ss_pred C--CEEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEE-EEEEEEEecccccccCC
Q psy2166 343 N--GKPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFT-RATIKCFGKGGVYLDSL 407 (805)
Q Consensus 343 ~--g~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~ 407 (805)
+ |..+ ....++.+...+....|.|.+++.+|+|.|+|.|.|..+.... ...+.|..
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--------- 150 (254)
T 2c1o_A 80 QRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR--------- 150 (254)
T ss_dssp ECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC---------
T ss_pred eCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC---------
Confidence 4 3322 1135677766777788999999999999999999987654322 23454421
Q ss_pred ChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCccc
Q psy2166 408 QPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVA 487 (805)
Q Consensus 408 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 487 (805)
T Consensus 151 -------------------------------------------------------------------------------- 150 (254)
T 2c1o_A 151 -------------------------------------------------------------------------------- 150 (254)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCC--ceEEEe--eC---CEEEEEEcc
Q psy2166 488 QAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGH--RYRTFH--DF---GIVILDILY 560 (805)
Q Consensus 488 ~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~--~~---~~~~L~i~~ 560 (805)
...+|.+....+... ...|+.++|.|.+.+...+.+.|+|+|||.++..+. +..... ++ ..+.|.|.+
T Consensus 151 ----~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~ 225 (254)
T 2c1o_A 151 ----ADAAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK 225 (254)
T ss_dssp ----CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEH
T ss_pred ----CCCCCeeEeecCChh-hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEecc
Confidence 124566766554443 346789999999985333346899999999886651 111111 11 135799999
Q ss_pred CCCCCCEEEEEEEEcCCcce
Q psy2166 561 CYEENSGVYECRATNKYGSD 580 (805)
Q Consensus 561 v~~~d~G~Y~C~a~n~~g~~ 580 (805)
+..+|+|.|+|.|.|.....
T Consensus 226 ~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 226 DEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HHHHTCCEEEEEEECTTCSS
T ss_pred ccccCCCeEEEEEEcCCCCC
Confidence 99999999999999987664
No 137
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.86 E-value=2.1e-21 Score=189.16 Aligned_cols=131 Identities=17% Similarity=0.148 Sum_probs=99.5
Q ss_pred EEEeccCCCCCcEEEEEEEEeCCc--ceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccC
Q psy2166 628 ILDILYCYEENSGVYECRATNKYG--SDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 705 (805)
Q Consensus 628 ~L~i~~~~~~d~G~Y~C~a~n~~g--~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 705 (805)
.|.|.+++.+|+|.|+|.|.|..| .....+.|.|..+ |.+...+... .+.
T Consensus 66 ~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~---------------------------p~~~~~~~~~-~~~ 117 (212)
T 1f97_A 66 GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVP---------------------------PSKPTISVPS-SVT 117 (212)
T ss_dssp EEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBC---------------------------CCCCEEECCS-EEE
T ss_pred eEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcC---------------------------CCCcccCCcc-ccC
Confidence 499999999999999999999987 5566778888753 3333334445 789
Q ss_pred CCCeEEEEEE-EeecCCCCeEEEEEECCE-EccCCCCe-------EEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccE
Q psy2166 706 EGEIAHFEAS-LIPVGDQTMTVEFLYNGK-PIEASHRI-------RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA 776 (805)
Q Consensus 706 ~G~~~~l~C~-~~~~g~p~~~v~W~~~g~-~l~~~~~~-------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 776 (805)
+|+.+.|.|. +. |.|.|.+.|+|+|. .+...... ..........|.|.++..+|+|.|+|.|.|.+|..
T Consensus 118 ~g~~~~l~C~~~~--~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 118 IGNRAVLTCSEHD--GSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp TTSCEEEEEECSC--CBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CCCeEEEEEEccc--CcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 9999999999 56 99999999999999 88765431 11222223479999999999999999999999998
Q ss_pred EEEEEEEEEEeC
Q psy2166 777 EISVNLECVVWS 788 (805)
Q Consensus 777 ~~~~~l~V~~~~ 788 (805)
..+..+.|.+.+
T Consensus 196 ~~s~~~~l~V~~ 207 (212)
T 1f97_A 196 MRSEAAHMDAVE 207 (212)
T ss_dssp EECCCEEEEEES
T ss_pred cccceEEEEEEE
Confidence 666666655543
No 138
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=1.4e-20 Score=178.62 Aligned_cols=119 Identities=18% Similarity=0.261 Sum_probs=93.6
Q ss_pred CCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEE
Q psy2166 635 YEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEA 714 (805)
Q Consensus 635 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C 714 (805)
..+|+|.|+|.|.|. ....+.|.|. .+|.+...+... .+.+|+.+.|.|
T Consensus 57 ~~~d~G~Y~C~~~n~---~~~~~~l~V~---------------------------~~P~~~~~~~~~-~~~~g~~~~l~C 105 (184)
T 3b5h_A 57 SDDQWGEYSCVFLPE---PMGTANIQLH---------------------------GPPRVKAVKSSE-HINEGETAMLVC 105 (184)
T ss_dssp GGGCCEEEEEEEEST---TSCEEEEEEC---------------------------CSCCCEESCSEE-EECTTSCEEEEE
T ss_pred chhhCeEEEEEEECC---cCcEEEEEEe---------------------------cCCceeecCCCc-EEcCCCcEEEEE
Confidence 466777777777762 2245566665 356666666666 789999999999
Q ss_pred EEeecCCC-CeEEEEEE---CC-EEccC--CCCeEEEeeCcEEEEEEcCCC-CCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 715 SLIPVGDQ-TMTVEFLY---NG-KPIEA--SHRIRTVHAFGMVVLEILGTK-IEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 715 ~~~~~g~p-~~~v~W~~---~g-~~l~~--~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
.+. |.| .+.|.|+| ++ ..+.. ..++.+..+++...|.|.+++ .+|+|.|+|.|.|.+|....++.|.|..
T Consensus 106 ~~~--g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 106 KSE--SVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp ECC--CSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEC--CCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 998 999 79999999 44 44543 267888888888899999999 9999999999999999999999998864
No 139
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.86 E-value=8.4e-21 Score=185.55 Aligned_cols=185 Identities=17% Similarity=0.263 Sum_probs=141.5
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
...++|...+.... +.+|++++|.|.+. +.|.+.+.|+|+|..+..+.. ..|.|.+++.+|+|.|+|.
T Consensus 16 ~~~~~i~~~p~~~~-v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 16 PRGSKITVNPESKA-VLAGQFVKLCCRAT--GHPFVQYQWFKMNKEIPNGNT---------SELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp ---CCEEECCCCEE-EETTSBEEEECEET--TTTSSEEEEEETTEECTTCCS---------SEEEETTCCGGGCEEEEEE
T ss_pred CCCCEEEECCCCeE-EeCCCcEEEEeeec--CCCCCEEEEEECCEECCCCCC---------CEEEEccCChhhCeEeEEE
Confidence 46788888777765 89999999999998 788899999999999866531 2599999999999999999
Q ss_pred EEcCCcce-EEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCc
Q psy2166 573 ATNKYGSD-VTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYG 651 (805)
Q Consensus 573 a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 651 (805)
|.|..|.. +..+.|.|...+..... .-. +
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~~~~~~~---------------------------------------~~~-----------~ 113 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDIPESFQR---------------------------------------SVD-----------G 113 (218)
T ss_dssp EECTTCCEECCCEEEEEECCCGGGCT---------------------------------------TCC-----------S
T ss_pred EEcCCCCceeeEEEEEEEccCccccc---------------------------------------ccc-----------c
Confidence 99987754 34455555543320000 000 0
Q ss_pred ceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEEC
Q psy2166 652 SDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN 731 (805)
Q Consensus 652 ~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~ 731 (805)
+ ...+|.+...+... .+.+|+.+.|.|.+. |.|.+.++|+++
T Consensus 114 ---------~--------------------------~~~~p~~~~~~~~~-~v~~G~~v~L~C~~~--g~p~~~v~W~~~ 155 (218)
T 3k0w_A 114 ---------V--------------------------SESKLQICVEPTSQ-KLMPGSTLVLQCVAV--GSPIPHYQWFKN 155 (218)
T ss_dssp ---------B--------------------------CCSSCEEEECCCCE-EECTTCCEEEECEEE--BSSCCEEEEEET
T ss_pred ---------c--------------------------cCCCceEEECCCce-eecCCCcEEEEEEec--ccCCCeEEEEEC
Confidence 0 01356777777777 899999999999998 999999999999
Q ss_pred CEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCcc-EEEEEEEEEEE
Q psy2166 732 GKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECVV 786 (805)
Q Consensus 732 g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~-~~~~~~l~V~~ 786 (805)
|..+....+ ..|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 156 ~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 156 ELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp TEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CEECCCCCC---------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 999876543 16999999999999999999999996 66666777754
No 140
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.86 E-value=5.4e-21 Score=184.20 Aligned_cols=183 Identities=15% Similarity=0.139 Sum_probs=114.4
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcE-EEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLV-VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~-v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
.+|.+...+.... +.+|++++|.|.+. +.|.+. ++|+|||..+.... ..|.|.+++.+|+|.|+|.
T Consensus 6 p~p~i~~~p~~~~-v~~G~~v~L~C~~~--~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~ 72 (204)
T 3sgj_C 6 PKAVVFLEPQWYR-VLEKDSVTLKCQGA--YSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQ 72 (204)
T ss_dssp CBCEEEEESCCSE-EETTCCEEEEEECC--SSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEEcCCCeE-EECCCCEEEEEcCC--CCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEE
Confidence 4566666666543 89999999999998 556554 99999998775432 1355555555555555555
Q ss_pred EEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcc
Q psy2166 573 ATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 652 (805)
| .|. .
T Consensus 73 a-------------------------------------------------------------------------~n~--~ 77 (204)
T 3sgj_C 73 T-------------------------------------------------------------------------QLS--T 77 (204)
T ss_dssp E-------------------------------------------------------------------------TTS--B
T ss_pred e-------------------------------------------------------------------------CCC--c
Confidence 5 331 1
Q ss_pred eEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECC
Q psy2166 653 DVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG 732 (805)
Q Consensus 653 ~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g 732 (805)
.+..+.|.|.. +|.+...+. . .+.+|+.++|.|.+. .+.|.+.|.|+|||
T Consensus 78 ~s~~~~l~V~~---------------------------~p~~~~~~~-~-~v~~G~~v~L~C~~~-~~~p~~~v~W~k~g 127 (204)
T 3sgj_C 78 LSDPVQLEVHI---------------------------GWLLLQAPR-W-VFKEEDPIHLRCHSW-KNTALHKVTYLQNG 127 (204)
T ss_dssp CCCCEEEEEEC---------------------------SSEEEECSC-S-EEETTCCEEEEEEEG-GGCCCEEEEEEETT
T ss_pred ccccEEEEEec---------------------------CceEecCCc-e-eEeCCCcEEEEEEec-CCCCCceEEEEECC
Confidence 22233444442 233322222 3 688999999999996 14467899999999
Q ss_pred EEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEc-CCccEEEEEEEEEEEeCCCc--ceEEEeecccC
Q psy2166 733 KPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATN-KWGQAEISVNLECVVWSPSQ--TKLVYSLFEVP 802 (805)
Q Consensus 733 ~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N-~~G~~~~~~~l~V~~~~~~~--~~~~~~~~~~~ 802 (805)
..+... ...+ .|.|.+++.+|+|.|+|.|.| ..|..+..+.|.|...++.+ ..+...|++++
T Consensus 128 ~~~~~~------~~~~--~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~P~i~~~~~~w~~i~ 192 (204)
T 3sgj_C 128 KGRKYF------HHNS--DFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVSTISSFFPPGYQGK 192 (204)
T ss_dssp EEEEEE------EECC--CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------------------
T ss_pred cEeecc------cCCc--eEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCCCcccccCCCccccc
Confidence 986431 1222 699999999999999999999 55566777778886544332 22233455543
No 141
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.86 E-value=8.5e-21 Score=187.55 Aligned_cols=192 Identities=20% Similarity=0.303 Sum_probs=146.0
Q ss_pred CCCeEEecC---CCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCce---EEEecCcEEEEEEcccccCCCe
Q psy2166 64 AKPVFIVPL---KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRF---KTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 64 ~~p~~~~~~---~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~---~~~~~~~~~~L~I~~~~~~D~G 137 (805)
.+|.|+..+ +....+.+|+.++|.|.+. +.|.+.|.|+|+|..+....++ ..... ..+|.|.+++.+|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G 89 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ--HWSLIMESVVPSDKG 89 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEE--EESCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGCE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecc--cCCCCeEEEEECCccccccccccceeeecC--cceEEEecCCcccCE
Confidence 456666554 2467899999999999998 5788899999999998765543 33322 237999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.+.|..|.......|.|...+. .+|.+.........+.+
T Consensus 90 ~Y~C~~~n~~~~~~~~~~l~V~~~~~-------------------------------------~~p~~~~~~~~~~~~~~ 132 (231)
T 3ojm_B 90 NYTCVVENEYGSINHTYHLDVVERSR-------------------------------------HRPILQAGLPANASTVV 132 (231)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCC-------------------------------------CCCEECTTCSCCEEEET
T ss_pred EEEEEEecccCcccccEEEEEEcCCC-------------------------------------CCCceeeccCCceEEEe
Confidence 99999999999888888888865431 22333333323335789
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEE----CCEEccCCCcE--EEEEE-----cCeEEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLY----NGKPIEASHRI--RTVHA-----FGMVVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k----~g~~l~~~~~~--~~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
|+.+.|.|.+ .+.|.+.+.|++ +|..+...... ..... .....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 133 g~~~~l~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 210 (231)
T 3ojm_B 133 GGDVEFVCKV--YSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQ 210 (231)
T ss_dssp TCCEEEECCE--ECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CCcEEEEEEE--ecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccce
Confidence 9999999988 678889999999 88877544321 11111 11247999999999999999999999999
Q ss_pred EEEEEEEEEecc
Q psy2166 287 AEISVNLECVDK 298 (805)
Q Consensus 287 ~~~~~~l~v~~~ 298 (805)
.+.++.|.|...
T Consensus 211 ~~~~~~l~V~~~ 222 (231)
T 3ojm_B 211 ANQSAWLTVLPK 222 (231)
T ss_dssp EEEEEEEEEECC
T ss_pred EeeEEEEEEecC
Confidence 999999988754
No 142
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.86 E-value=1.2e-21 Score=191.08 Aligned_cols=125 Identities=18% Similarity=0.261 Sum_probs=101.9
Q ss_pred EEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q psy2166 627 VILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 706 (805)
Q Consensus 627 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 706 (805)
..|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+ |.+...+.+. .+.+
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~---------------------------p~~~~~~~~~-~~~~ 135 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK---------------------------PSGTRCFVDG-SEEI 135 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC---------------------------CBSCEEEEES-CCBT
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcC---------------------------CCCceeeeec-ceec
Confidence 44999999999999999999999999999999999853 4443334444 6889
Q ss_pred CCeEEEEEEE-eecCCCCeEEEEEEC--CEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEE
Q psy2166 707 GEIAHFEASL-IPVGDQTMTVEFLYN--GKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 783 (805)
Q Consensus 707 G~~~~l~C~~-~~~g~p~~~v~W~~~--g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 783 (805)
|+.++|.|.+ . |.|.|.|+|+|+ +..+...... ....+ .|.|.++..+|+|.|+|.|.|.+|..+.++.|.
T Consensus 136 g~~v~l~C~~~~--g~p~~~v~W~~~~~~~~~~~~~~~--~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 209 (214)
T 3jz7_A 136 GNDFKLKCEPKE--GSLPLQFEWQKLSDSQTMPTPWLA--EMTSP--VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLD 209 (214)
T ss_dssp TCCEEEEEECSB--CCSSCEEEEEECSTTCCCCGGGGG--GTTSS--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred CCcEEEEecCCC--CCCCCEEEEEECCCCCccCcccee--ccCCC--EEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEE
Confidence 9999999999 6 999999999995 4444433221 11223 799999999999999999999999999999998
Q ss_pred EE
Q psy2166 784 CV 785 (805)
Q Consensus 784 V~ 785 (805)
|.
T Consensus 210 V~ 211 (214)
T 3jz7_A 210 VV 211 (214)
T ss_dssp CB
T ss_pred Ee
Confidence 86
No 143
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.85 E-value=4.3e-21 Score=187.66 Aligned_cols=186 Identities=24% Similarity=0.417 Sum_probs=136.9
Q ss_pred CCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCC--ceEEEEeCcE--EEEEEcccCcCCceEE
Q psy2166 302 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN--RVKMVSDFGF--VVMDIAYVQSHDSGEY 377 (805)
Q Consensus 302 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~--~~l~i~~v~~~d~G~Y 377 (805)
.+|.+...+.... +.+|+.++|.|.+. +.|.+.|.|+++|..+.... ...+...++. ..|.|.++..+|+|.|
T Consensus 8 ~~P~i~~~p~~~~-v~~G~~v~L~C~~~--g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 8 QSPRIIEHPTDLV-VKKNEPATLNCKVE--GKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCEEEECCCCEE-ECTTSCEEECCEEE--CSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred CCCEEecCCCceE-EeCCCcEEEEEEcC--CCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 6788887776655 88999999999997 78889999999999987542 2222222222 2246888999999999
Q ss_pred EEEEEeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEE
Q psy2166 378 VCRAWNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAH 456 (805)
Q Consensus 378 ~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (805)
+|.+.|..|.... .+.+.|...
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~--------------------------------------------------------- 107 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVL--------------------------------------------------------- 107 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEE---------------------------------------------------------
T ss_pred EEEEecCCCccccccceEEEEEe---------------------------------------------------------
Confidence 9999999887643 456655421
Q ss_pred EEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEE-eeCCCCCcEEEEEEC
Q psy2166 457 FEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL-TPVTDPDLVVEWFYN 535 (805)
Q Consensus 457 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v-~~~g~p~~~v~W~~~ 535 (805)
+|.+...+... .+.+|+.++|.|.+ . +.|.+.++|+++
T Consensus 108 --------------------------------------~~~~~~~~~~~-~~~~g~~v~l~C~~~~--g~p~~~v~W~~~ 146 (217)
T 2vr9_A 108 --------------------------------------RDDFRVEPKDT-RVAKGETALLECGPPK--GIPEPTLIWIKD 146 (217)
T ss_dssp --------------------------------------CCSCSBCCCCE-EECTTSCEEECCBCCC--EESCCEEEEEET
T ss_pred --------------------------------------CCCcEECCCcc-EEcCCCeEEEEEECCC--CCCCCeEEEEEC
Confidence 22222222332 37899999999998 6 678889999999
Q ss_pred CEEccC--------CCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeee
Q psy2166 536 GKKLPH--------GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSK 591 (805)
Q Consensus 536 g~~l~~--------~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 591 (805)
|..+.. ..++....+ + .|.|.+++.+|+|.|+|.|.|..|....+..+.+...
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 147 GVPLDDLKAMSFGASSRVRIVDG-G--NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp TEEECCCCCC---CCCSEEEETT-T--EEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred CcCCCcccccccccCCcEEecCC-C--cEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 999973 333333222 2 5999999999999999999999999887766655543
No 144
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.85 E-value=5.4e-21 Score=191.98 Aligned_cols=202 Identities=17% Similarity=0.162 Sum_probs=124.4
Q ss_pred hhhhhcCccccCCCCCCC------CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCC-----CceEEEEEC--CEec-
Q psy2166 44 VEHALAGKYQRQPSGPEE------TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDP-----NLKIEWIFN--GKPL- 109 (805)
Q Consensus 44 ~~~~d~g~y~c~~~~~~~------~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-----~~~v~W~k~--g~~i- 109 (805)
++.+|+|.|+|.+..... ...+|.+.. .+..+.+.+|+.++|.|.+. +.| .+.|.|+|+ |..+
T Consensus 11 v~~~dsg~Y~C~a~g~~~~~~~~~~~~~~~~~~-~p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~g~~~~ 87 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYSFTNYWMNWLRELVMTQ-SPLTLSVTIGQPASISCKSS--QSLLYSNGKTYLNWLLQRPGQSPK 87 (254)
T ss_dssp ---------------------------CCCEEE-ECSEEEECTTSCEEEEEEES--SCCBCSSSCBCEEEEEECTTSCCE
T ss_pred ecCCccEEEEEcCchhhhhhhhhheeeceeEEe-CCceEEecCCCcEEEEeecc--CcccccCCCCceEEEEeCCCCCce
Confidence 788999999998873211 122344443 34478999999999999998 455 489999984 3322
Q ss_pred -----------CCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchh
Q psy2166 110 -----------ELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGL 177 (805)
Q Consensus 110 -----------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~ 177 (805)
....|+.+..+++..+|.|.+++.+|+|.|+|.|.|..+.... ...+.|....
T Consensus 88 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~--------------- 152 (254)
T 2c1o_A 88 RLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD--------------- 152 (254)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC---------------
T ss_pred EEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC---------------
Confidence 1236888877778889999999999999999999987553322 2345554211
Q ss_pred hhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE--EEE
Q psy2166 178 EKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI--RTV 255 (805)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~--~~~ 255 (805)
.+|.+........ ..+|+.++|.|.+.....+.+.+.|+|+|..+...... ...
T Consensus 153 -----------------------~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 208 (254)
T 2c1o_A 153 -----------------------AAPTVSIFPPSSE-QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 208 (254)
T ss_dssp -----------------------BCCEEEEECCCHH-HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCC
T ss_pred -----------------------CCCeeEeecCChh-hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccc
Confidence 2455554433322 33677999999985322233689999999988655111 100
Q ss_pred E-Ec----CeEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 256 H-AF----GMVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 256 ~-~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
. .+ ....|.|.++..+|+|.|+|.|.|.....
T Consensus 209 ~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 209 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred cCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 0 01 13589999999999999999999987654
No 145
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.85 E-value=4e-20 Score=180.69 Aligned_cols=184 Identities=16% Similarity=0.199 Sum_probs=139.2
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
..+.|+..+. .+.+.+|+.++|.|.+. +.|.+.|.|+|++..+..+.. .+|.|.+++.+|+|.|+|.+
T Consensus 17 ~~~~i~~~p~-~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~~ 84 (218)
T 3k0w_A 17 RGSKITVNPE-SKAVLAGQFVKLCCRAT--GHPFVQYQWFKMNKEIPNGNT---------SELIFNAVHVKDAGFYVCRV 84 (218)
T ss_dssp --CCEEECCC-CEEEETTSBEEEECEET--TTTSSEEEEEETTEECTTCCS---------SEEEETTCCGGGCEEEEEEE
T ss_pred CCCEEEECCC-CeEEeCCCcEEEEeeec--CCCCCEEEEEECCEECCCCCC---------CEEEEccCChhhCeEeEEEE
Confidence 4566666555 78999999999999998 688899999999999876532 27999999999999999999
Q ss_pred EeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 144 WNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 144 ~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
.|..|.. .....|.|...+........ .....+|.+...+... .+.+|+.+.
T Consensus 85 ~n~~~~~~s~~~~l~V~~~~~~~~~~~~--------------------------~~~~~~p~~~~~~~~~-~v~~G~~v~ 137 (218)
T 3k0w_A 85 NNNFTFEFSQWSQLDVCDIPESFQRSVD--------------------------GVSESKLQICVEPTSQ-KLMPGSTLV 137 (218)
T ss_dssp ECTTCCEECCCEEEEEECCCGGGCTTCC--------------------------SBCCSSCEEEECCCCE-EECTTCCEE
T ss_pred EcCCCCceeeEEEEEEEccCcccccccc--------------------------cccCCCceEEECCCce-eecCCCcEE
Confidence 9987754 44567777654322110000 0111346666665554 478999999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEEec
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECVD 297 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~ 297 (805)
|.|.+ .+.|.+.+.|+++|..+..... ..|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 138 L~C~~--~g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 138 LQCVA--VGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp EECEE--EBSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred EEEEe--cccCCCeEEEEECCEECCCCCC---------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 99998 6788899999999999876543 36999999999999999999998776 45666776653
No 146
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=4.1e-21 Score=185.25 Aligned_cols=88 Identities=19% Similarity=0.377 Sum_probs=73.9
Q ss_pred CCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEE
Q psy2166 691 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT 770 (805)
Q Consensus 691 ~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 770 (805)
+|.+...+... .+.+|+.+.|.|.+. |.|.|.|.|++++..+....+ +...++ .|.|.++..+|+|.|+|.|.
T Consensus 113 ~p~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~--~~~~~~--~L~i~~v~~~d~G~Y~C~a~ 185 (201)
T 3s97_C 113 PADIVVQFKDV-YALMGQNVTLECFAL--GNPVPDIRWRKVLEPMPSTAE--ISTSGA--VLKIFNIQLEDEGIYECEAE 185 (201)
T ss_dssp EEEEEEECCCE-EEETTCCEEEEEEEE--EESCCEEEEEETTBCCCTTCE--EETTTT--EEEECSCCGGGCEEEEEEEE
T ss_pred CCceEecCCce-EEecCCcEEEEEEcc--CCCCCceEEEeCCCcCCCcee--ecCCCC--EEEEccCChhhCEEEEEEEE
Confidence 45555555555 889999999999998 899999999999998775532 333344 79999999999999999999
Q ss_pred cCCccEEEEEEEEEE
Q psy2166 771 NKWGQAEISVNLECV 785 (805)
Q Consensus 771 N~~G~~~~~~~l~V~ 785 (805)
|..|..+.++.|.|+
T Consensus 186 n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 186 NIRGKDKHQARIYVQ 200 (201)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ecCCceeeeEEEEEe
Confidence 999999999999985
No 147
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.85 E-value=5.9e-20 Score=180.73 Aligned_cols=129 Identities=14% Similarity=0.104 Sum_probs=92.5
Q ss_pred CEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCccccc
Q psy2166 625 GIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNL 704 (805)
Q Consensus 625 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 704 (805)
+...|.|.+++.+|+|.|+|.|.|..|.....+.+.+..++ ...+... .+
T Consensus 81 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~-----------------------------~~~~~~~-~~ 130 (226)
T 4f80_A 81 GKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALG-----------------------------SDLHVDV-KG 130 (226)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC-----------------------------CCCEEEE-EE
T ss_pred CeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccce-----------------------------eccccee-ee
Confidence 45679999999999999999999988877766555554211 1112223 67
Q ss_pred CCCCeEEEEEEEeecC-CCCeEEEEEECC-EEccCCCCeEEEeeCc-EEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEE
Q psy2166 705 SEGEIAHFEASLIPVG-DQTMTVEFLYNG-KPIEASHRIRTVHAFG-MVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 781 (805)
Q Consensus 705 ~~G~~~~l~C~~~~~g-~p~~~v~W~~~g-~~l~~~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 781 (805)
.+|+.+.|.|.+. | .|.|.|+|+|++ ..+............+ ...+.+.+++.+|+|.|+|.|.|.+|....++.
T Consensus 131 ~~g~~v~l~c~~~--g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~ 208 (226)
T 4f80_A 131 YKDGGIHLECRST--GWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTAS 208 (226)
T ss_dssp EETTEEEEEEEEE--EEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEE
T ss_pred ccCCceeeEEEec--cCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEE
Confidence 8899999999998 6 699999999965 5554443333333333 344556677889999999999999999999999
Q ss_pred EEEE
Q psy2166 782 LECV 785 (805)
Q Consensus 782 l~V~ 785 (805)
|.|.
T Consensus 209 v~v~ 212 (226)
T 4f80_A 209 ISIA 212 (226)
T ss_dssp ECCC
T ss_pred EEEC
Confidence 8884
No 148
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.84 E-value=2.1e-20 Score=181.94 Aligned_cols=179 Identities=15% Similarity=0.096 Sum_probs=126.9
Q ss_pred CCceecCC--CcEEEEEEEecCCCCCceEEEEE---CCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCe
Q psy2166 74 PEFKLGEA--QPLHLEAQVEPKNDPNLKIEWIF---NGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAG 148 (805)
Q Consensus 74 ~~~~v~~G--~~v~L~C~~~~~~~p~~~v~W~k---~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 148 (805)
..+.+.+| +.++|.|.+. .|.+.|+|++ ||..+..+.++.....+ .|.|.+++.+|+|.|+|.|.|..+
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~---~p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~ 88 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGS---ISNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDE 88 (213)
T ss_dssp EEEEECCSTTCEEEECCCBS---STTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----
T ss_pred eEEEEecCCCccEEEeeccC---CCCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCe
Confidence 46789999 9999999997 3668999988 47777766566554443 699999999999999999998544
Q ss_pred eEEEE-EEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEE
Q psy2166 149 ETFTS-TTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASL 227 (805)
Q Consensus 149 ~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 227 (805)
...+. ..|.|... .+|.+...+.....+.+|+.++|.|.+
T Consensus 89 ~~~s~~~~l~v~~~---------------------------------------~~p~~~~~~~~~~~v~~G~~v~L~C~~ 129 (213)
T 2x1w_L 89 SYQSIMYIVVVVGY---------------------------------------RIYDVVLSPSHGIELSVGEKLVLNCTA 129 (213)
T ss_dssp CEECCCEEEEECBC---------------------------------------CEEEEEEESCSCEEEETTCCEEEEEEE
T ss_pred eEEEEEEEEEEeCC---------------------------------------cccceEEcCCCCeEEcCCCCEEEEEEE
Confidence 33322 45555321 223344444333357899999999999
Q ss_pred eeCCCCCeEEEEEECCEEccCCCc-EEEEE-------EcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEec
Q psy2166 228 IPVGDQTMTVEFLYNGKPIEASHR-IRTVH-------AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 297 (805)
Q Consensus 228 ~~~~~p~~~i~W~k~g~~l~~~~~-~~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 297 (805)
.....+.+.+.|+++|..+..... ..... ......|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 130 ~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 130 RTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp EECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEec
Confidence 533344568999999886543211 10100 12245799999999999999999999999999999999874
No 149
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.84 E-value=1.9e-20 Score=180.71 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=101.1
Q ss_pred EEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q psy2166 627 VILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 706 (805)
Q Consensus 627 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 706 (805)
..|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++ ..|.+.. . .+.+
T Consensus 67 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~------------------------~~p~~~~----~-~~~~ 117 (202)
T 3bp6_B 67 ALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASY------------------------MRIDTRI----L-EVPG 117 (202)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC------------------------CCEEEEE----E-ECTT
T ss_pred eEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCC------------------------CcccEEE----E-ecCC
Confidence 459999999999999999999999988888999988643 2344432 2 4678
Q ss_pred CCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 707 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 707 G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
|+.+.|.|.+. |.|.|.|.|++++..+.. ......++....|.|.++..+|+|.|+|.|.|.+|....++.|.|..
T Consensus 118 g~~v~l~C~~~--g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 118 TGEVQLTCQAR--GYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp TCCEEEEEEEE--EBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred CCeEEEEEEcc--ccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 99999999998 899999999998875532 11122333456788889999999999999999999999999988865
Q ss_pred e
Q psy2166 787 W 787 (805)
Q Consensus 787 ~ 787 (805)
.
T Consensus 194 ~ 194 (202)
T 3bp6_B 194 R 194 (202)
T ss_dssp -
T ss_pred c
Confidence 4
No 150
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.84 E-value=8.9e-21 Score=184.66 Aligned_cols=191 Identities=24% Similarity=0.414 Sum_probs=135.5
Q ss_pred CCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCC-----ceEEEEeCcEE--EEEEcccCcCCc
Q psy2166 302 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN-----RVKMVSDFGFV--VMDIAYVQSHDS 374 (805)
Q Consensus 302 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~-----~~~~~~~~~~~--~l~i~~v~~~d~ 374 (805)
.+|.+...+.... +.+|+.++|.|.+. +.|.+.+.|++++..+.... ......++... .|.|.++..+|+
T Consensus 8 ~pp~i~~~p~~~~-v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 8 FPPRIVEHPSDLI-VSKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEEECCCCEE-ECTTCCEEECCEEE--EESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred CCcceecCCCceE-EeCCCcEEEEEEcC--CCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 4667776666554 88999999999997 77888999999999886432 11122222222 244567789999
Q ss_pred eEEEEEEEeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCc
Q psy2166 375 GEYVCRAWNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 453 (805)
Q Consensus 375 G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (805)
|.|+|.+.|..|... ..+.|.|...+
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~----------------------------------------------------- 111 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILR----------------------------------------------------- 111 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEEC-----------------------------------------------------
T ss_pred eEEEEEEECCCCceeecceEEEEEecc-----------------------------------------------------
Confidence 999999999988663 45666664321
Q ss_pred eEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEE-eeCCCCCcEEEE
Q psy2166 454 SAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL-TPVTDPDLVVEW 532 (805)
Q Consensus 454 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v-~~~g~p~~~v~W 532 (805)
|.+...+... .+.+|+.++|.|.+ . +.|.+.++|
T Consensus 112 ------------------------------------------~~~~~~~~~~-~~~~g~~~~l~C~~~~--~~p~~~v~W 146 (212)
T 2v9r_A 112 ------------------------------------------DDFRQNPSDV-MVAVGEPAVMECQPPR--GHPEPTISW 146 (212)
T ss_dssp ------------------------------------------SSCSBCCCCE-EEETTSCEEEECBCCC--EESCCEEEE
T ss_pred ------------------------------------------ccceeCCCce-EecCCCcEEEEEecCC--CCCCCEEEE
Confidence 2222222222 37899999999998 6 678889999
Q ss_pred EECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEE-EEEEEeeeeeeee
Q psy2166 533 FYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK-ASLKCVSKTNLIL 596 (805)
Q Consensus 533 ~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~ 596 (805)
+++|..+.......... ++ .|.|.++..+|+|.|+|.|.|..|..... +.|.|..+|.+..
T Consensus 147 ~~~~~~l~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~~ 208 (212)
T 2v9r_A 147 KKDGSPLDDKDERITIR-GG--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVK 208 (212)
T ss_dssp EETTEEECTTSTTEEEE-TT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC------
T ss_pred EECCccCCCCcceEEcc-CC--eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHhh
Confidence 99999997654333333 23 59999999999999999999999987654 8999998887643
No 151
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=2.6e-20 Score=181.33 Aligned_cols=178 Identities=18% Similarity=0.228 Sum_probs=129.9
Q ss_pred ecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEec------------CCCCceEEEecCcEEEEEEcccccCCCe
Q psy2166 70 VPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 70 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G 137 (805)
...+..+.+.+|+.++|.|.+. +.|.+.|.|+|++..+ ....++.+.. .+|.|.+++.+|+|
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G 78 (212)
T 1f97_A 5 YTAQSDVQVPENESIKLTCTYS--GFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNG 78 (212)
T ss_dssp ECSCSEEEEETTCCEEEECEEE--SCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCE
T ss_pred EecCCCeEEEcCCCEEEEeEeC--CCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCe
Confidence 3445578899999999999998 6789999999987652 2345665554 38999999999999
Q ss_pred EEEEEEEeCCe--eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 138 IYTCRAWNLAG--ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 138 ~Y~C~a~n~~g--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
.|+|.+.+..| .......|.|..++.+ ...+.. ..+
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~-----------------------------------------~~~~~~-~~~ 116 (212)
T 1f97_A 79 EYTCMVSEEGGQNYGEVSIHLTVLVPPSK-----------------------------------------PTISVP-SSV 116 (212)
T ss_dssp EEEEEEEETTSSSEEEEEEEEEEEBCCCC-----------------------------------------CEEECC-SEE
T ss_pred EEEEEEEccCCCcccEEEEEEEEEcCCCC-----------------------------------------cccCCc-ccc
Confidence 99999999866 4556667777654321 111111 136
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEECCE-EccCCCcE-------EEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLYNGK-PIEASHRI-------RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k~g~-~l~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
.+|+.++|.|.+. .+.|.+.+.|++++. .+...... ..........|.|.+++.+|+|.|+|.|.|..|..
T Consensus 117 ~~g~~~~l~C~~~-~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 117 TIGNRAVLTCSEH-DGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp ETTSCEEEEEECS-CCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CCCCeEEEEEEcc-cCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 7899999999831 688899999999999 87654331 11122234579999999999999999999999887
Q ss_pred --EEEEEEEEe
Q psy2166 288 --EISVNLECV 296 (805)
Q Consensus 288 --~~~~~l~v~ 296 (805)
+..+.|.|.
T Consensus 196 ~~s~~~~l~V~ 206 (212)
T 1f97_A 196 MRSEAAHMDAV 206 (212)
T ss_dssp EECCCEEEEEE
T ss_pred cccceEEEEEE
Confidence 445555554
No 152
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.84 E-value=4.3e-20 Score=177.19 Aligned_cols=174 Identities=8% Similarity=0.024 Sum_probs=126.4
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+++|.+...+. . .|.+|++++|.|.+. + +.+.+.|+|+|..+....+. .........|.|.+++.+|+|.|+|.
T Consensus 3 ~~~P~i~~~p~-~-~v~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 3p2t_A 3 LPKPTLWAEPG-S-VISWGNSVTIWCQGT--L-EAREYRLDKEESPAPWDRQN-PLEPKNKARFSIPSMTEDYAGRYRCY 76 (196)
T ss_dssp BCCCEEEEESC-S-EEETTCCEEEEEECC--T-TCCEEEEEETTSCSCSEEEC-CCSSSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEccCC-C-cCCCCCcEEEEeeCC--C-CCCEEEEEECCCCCcccccc-cccCCceEEEEeccCCcccCceEEEE
Confidence 46788777665 3 889999999999988 3 66899999999887642211 11123455899999999999999999
Q ss_pred EEeCCee--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCce
Q psy2166 143 AWNLAGE--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI 220 (805)
Q Consensus 143 a~n~~g~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~ 220 (805)
|.|..|. ......|.|.... .+|.+...+.. .+.+|+.
T Consensus 77 a~n~~g~~~~s~~~~l~V~~~~--------------------------------------~~p~~~~~~~~--~v~~G~~ 116 (196)
T 3p2t_A 77 YRSPVGWSQPSDPLELVMTGAY--------------------------------------SKPTLSALPSP--LVTSGKS 116 (196)
T ss_dssp EEETTEEBCCCCCEEEEEECSS--------------------------------------CCCEEEEESCS--EECTTCC
T ss_pred EeCCCcccCCCccEEEEecCCC--------------------------------------CCCEEEeCCcc--eecCCCe
Confidence 9999873 2344556664321 23555544433 3789999
Q ss_pred EEEEEEEeeCCCCCeEEEEEECCEEccCCCcE-EEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 221 AHFEASLIPVGDQTMTVEFLYNGKPIEASHRI-RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 221 ~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
++|.|.+. + +.+.+.|+|+|..+...... ..........|.|.+++.+|+|.|+|.|.|..+
T Consensus 117 v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 117 VTLLCQSR--S-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEE--E-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEEEEecC--C-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 99999884 3 34689999999877544322 112223456899999999999999999999765
No 153
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.84 E-value=4.8e-20 Score=177.58 Aligned_cols=169 Identities=15% Similarity=0.184 Sum_probs=124.7
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCce-EEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLK-IEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~-v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.++|.+...+. ...+.+|+.++|.|.+. +.|.+. |.|+|||..+.... .+|.|.+++.+|+|.|+|
T Consensus 5 ~p~p~i~~~p~-~~~v~~G~~v~L~C~~~--~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C 71 (204)
T 3sgj_C 5 LPKAVVFLEPQ-WYRVLEKDSVTLKCQGA--YSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRC 71 (204)
T ss_dssp -CBCEEEEESC-CSEEETTCCEEEEEECC--SSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEE
T ss_pred CCCCeEEEcCC-CeEEECCCCEEEEEcCC--CCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEE
Confidence 45677666665 47899999999999998 566555 99999999887653 279999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 142 RAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
.+.|. .......|.|...+ .+...+. ..+.+|+.+
T Consensus 72 ~a~n~--~~s~~~~l~V~~~p-----------------------------------------~~~~~~~--~~v~~G~~v 106 (204)
T 3sgj_C 72 QTQLS--TLSDPVQLEVHIGW-----------------------------------------LLLQAPR--WVFKEEDPI 106 (204)
T ss_dssp EETTS--BCCCCEEEEEECSS-----------------------------------------EEEECSC--SEEETTCCE
T ss_pred EeCCC--cccccEEEEEecCc-----------------------------------------eEecCCc--eeEeCCCcE
Confidence 99874 33345566665332 2222222 237789999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcC-CeeEEEEEEEEEecc
Q psy2166 222 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK-WGQAEISVNLECVDK 298 (805)
Q Consensus 222 ~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~g~~~~~~~l~v~~~ 298 (805)
+|.|.+. .+.|.+.+.|+|+|..+... .....|.|.+++.+|+|.|+|.|.|. .+..+..+.|.|...
T Consensus 107 ~L~C~~~-~~~p~~~v~W~k~g~~~~~~--------~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 107 HLRCHSW-KNTALHKVTYLQNGKGRKYF--------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp EEEEEEG-GGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEEEec-CCCCCceEEEEECCcEeecc--------cCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCc
Confidence 9999883 24567999999999876321 11247999999999999999999994 444566677777653
No 154
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=4.6e-21 Score=201.95 Aligned_cols=201 Identities=15% Similarity=0.168 Sum_probs=137.8
Q ss_pred CCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCce
Q psy2166 466 DPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRY 545 (805)
Q Consensus 466 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~ 545 (805)
.+.|.|.+.... .......-.+|.|...+.... +.+|++++|.|.+. |.|.+.+.|++++..+......
T Consensus 137 ~~~~~C~~~~~l--------~~l~~~~c~~P~i~~~~~~~~-v~~G~~v~L~C~~~--g~p~p~i~W~~~~~~~~~~~~~ 205 (347)
T 2ifg_A 137 EQKLQCHGQGPL--------AHMPNASCGVPTLKVQVPNAS-VDVGDDVLLRCQVE--GRGLEQAGWILTELEQSATVMK 205 (347)
T ss_dssp GGCCCCSSSSCS--------SCCCCTTCCCCEEEEECCSSC-CBTTCCEEEEEEEE--CSSCCCCCEEESCCCSSEEECC
T ss_pred ccCCCCCCChHH--------hcCCcccCCCCceeccCCceE-EeCCCcEEEEEEEe--cCCCCEEEEEcCCceeeccccc
Confidence 456777765411 111223446888888776654 89999999999998 7788999999998654221000
Q ss_pred EEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCC
Q psy2166 546 RTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFG 625 (805)
Q Consensus 546 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~ 625 (805)
........
T Consensus 206 --~~~~~~~~---------------------------------------------------------------------- 213 (347)
T 2ifg_A 206 --SGGLPSLG---------------------------------------------------------------------- 213 (347)
T ss_dssp --CCCSSEEE----------------------------------------------------------------------
T ss_pred --ceecccce----------------------------------------------------------------------
Confidence 00111223
Q ss_pred EEEEEeccCCCCCcE-EEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCccccc
Q psy2166 626 IVILDILYCYEENSG-VYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNL 704 (805)
Q Consensus 626 ~~~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 704 (805)
|.|.+++.+|+| .|+|.|.|..|.....+.|.|.. +|.+ ... .+
T Consensus 214 ---L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~---------------------------~P~i----~~~-~~ 258 (347)
T 2ifg_A 214 ---LTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF---------------------------PASV----QLH-TA 258 (347)
T ss_dssp ---EEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE---------------------------EEEE----EEC-CC
T ss_pred ---EEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC---------------------------CCee----eec-cC
Confidence 455555555555 55555555555555555555543 2332 011 44
Q ss_pred CCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEee-------CcEEEEEEcCCCCCCCEEEEEEEEcCCccEE
Q psy2166 705 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA-------FGMVVLEILGTKIEDTGVYTCRATNKWGQAE 777 (805)
Q Consensus 705 ~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-------~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 777 (805)
.+|+.++|.|.+. |.|.|.|+|+|+|..+..+........ ....+|.|.+++.+|+|.|+|.|.|.+|.++
T Consensus 259 ~~g~~v~l~C~~~--g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 336 (347)
T 2ifg_A 259 VEMHHWCIPFSVD--GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 336 (347)
T ss_dssp EESSSEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ccCceEEEEEEee--ecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCcee
Confidence 5689999999999 899999999999999987666543221 1245799999999999999999999999999
Q ss_pred EEEEEEEEE
Q psy2166 778 ISVNLECVV 786 (805)
Q Consensus 778 ~~~~l~V~~ 786 (805)
.++.|.|..
T Consensus 337 ~~~~l~V~~ 345 (347)
T 2ifg_A 337 ASIMAAFMD 345 (347)
T ss_dssp EEEEECSCC
T ss_pred eEEEEEecC
Confidence 999998864
No 155
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=2.3e-20 Score=196.66 Aligned_cols=197 Identities=21% Similarity=0.201 Sum_probs=150.5
Q ss_pred hcCccccCCCCCCC-----CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCc
Q psy2166 48 LAGKYQRQPSGPEE-----TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFG 122 (805)
Q Consensus 48 d~g~y~c~~~~~~~-----~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~ 122 (805)
+.|.|+|....... .-.+|.+...+. ...+.+|+.++|.|.+. +.|.+.|.|++++..+....... ....
T Consensus 136 ~~~~~~C~~~~~l~~l~~~~c~~P~i~~~~~-~~~v~~G~~v~L~C~~~--g~p~p~i~W~~~~~~~~~~~~~~--~~~~ 210 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHMPNASCGVPTLKVQVP-NASVDVGDDVLLRCQVE--GRGLEQAGWILTELEQSATVMKS--GGLP 210 (347)
T ss_dssp GGGCCCCSSSSCSSCCCCTTCCCCEEEEECC-SSCCBTTCCEEEEEEEE--CSSCCCCCEEESCCCSSEEECCC--CCSS
T ss_pred cccCCCCCCChHHhcCCcccCCCCceeccCC-ceEEeCCCcEEEEEEEe--cCCCCEEEEEcCCceeecccccc--eecc
Confidence 56899997654322 234788776654 67899999999999998 68889999999987654321111 2234
Q ss_pred EEEEEEcccccCCCe-EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCC
Q psy2166 123 FVTLDLTEVYDRDQG-IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGR 201 (805)
Q Consensus 123 ~~~L~I~~~~~~D~G-~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (805)
..+|.|.+++.+|+| .|+|.|.|..|.......|.|..+
T Consensus 211 ~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~---------------------------------------- 250 (347)
T 2ifg_A 211 SLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFP---------------------------------------- 250 (347)
T ss_dssp EEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEE----------------------------------------
T ss_pred cceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCC----------------------------------------
Confidence 558999999999999 999999999988877766666443
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEc-------CeEEEEEcCCCCcccE
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF-------GMVVLEILGTKIEDTG 274 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~-------~~~~L~i~~~~~~d~G 274 (805)
|.+ ....+.+|+.++|.|.+ .|.|.|.|.|+|+|..+............ ....|.|.+++.+|+|
T Consensus 251 -P~i-----~~~~~~~g~~v~l~C~~--~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G 322 (347)
T 2ifg_A 251 -ASV-----QLHTAVEMHHWCIPFSV--DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNG 322 (347)
T ss_dssp -EEE-----EECCCEESSSEEEEEEE--EEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCE
T ss_pred -Cee-----eeccCccCceEEEEEEe--eecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCc
Confidence 332 01124578999999998 57789999999999999866554332211 2567999999999999
Q ss_pred EEEEEEEcCCeeEEEEEEEEEec
Q psy2166 275 VYTCRATNKWGQAEISVNLECVD 297 (805)
Q Consensus 275 ~Y~C~~~n~~g~~~~~~~l~v~~ 297 (805)
.|+|.|.|..|..+.++.|.|..
T Consensus 323 ~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 323 NYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp EEEEEEEETTEEEEEEEEECSCC
T ss_pred eEEEEEecCCCceeeEEEEEecC
Confidence 99999999999999988888763
No 156
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.83 E-value=8.9e-20 Score=176.94 Aligned_cols=125 Identities=17% Similarity=0.248 Sum_probs=102.6
Q ss_pred EEeccCCCCCcEEEEEEEEeCC-cceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCC
Q psy2166 629 LDILYCYEENSGVYECRATNKY-GSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 707 (805)
Q Consensus 629 L~i~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 707 (805)
|.|.+++.+|+|.|+|.+.|.. +.....+.|.|..++ ..|.+..... .+.+|
T Consensus 73 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~------------------------~~p~i~~~~~---~~~~g 125 (208)
T 3r4d_A 73 LLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPV------------------------TQPFLQVTNT---TVKEL 125 (208)
T ss_dssp EEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCC------------------------CCCEEEESCS---SCCTT
T ss_pred EEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCC------------------------CCCEEecCCc---eEeeC
Confidence 9999999999999999999985 666677788887532 3466655444 38999
Q ss_pred CeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEE-EEEEEEEE
Q psy2166 708 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLECV 785 (805)
Q Consensus 708 ~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V~ 785 (805)
+.+.|.|.+. +.| |.|.|+++|..+..+.++.+..+++ +|.|.++..+|+|.|+|.|.|.+|... ..++|.|.
T Consensus 126 ~~v~l~C~~~--~~p-p~i~W~~~g~~l~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 126 DSVTLTCLSN--DIG-ANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp CCEEEEEECS--CTT-CEEEEEETTEECCCCSSEEEETTTT--EEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred CCEEEEEECC--CCC-CceEEEECCEeCCCCCCeEEcCCCC--EEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 9999999998 766 7999999999999888887666555 799999999999999999999999654 34455553
No 157
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.83 E-value=3.1e-20 Score=180.75 Aligned_cols=180 Identities=14% Similarity=0.129 Sum_probs=125.2
Q ss_pred cccCC--CeEEEEEEEeecCCCCcEEEEEE---CCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeE
Q psy2166 315 GLKDG--DSAHFECTLTPVNDPELKVEWFH---NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDF 389 (805)
Q Consensus 315 ~~~~g--~~~~l~C~~~~~~~p~~~v~W~~---~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 389 (805)
.+.+| +.++|.|.+. + |.+.+.|++ +|..+....++.... .. .|.|.++..+|+|.|+|.|.|..+...
T Consensus 18 ~v~eG~~~~v~L~C~~~--~-p~~~v~w~~~~~~g~~~~~~~~~~~~~-~~--~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 18 YITENKNKTVVIPCLGS--I-SNLNVSLCARYPEKRFVPDGNRISWDS-KK--GFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp EECCSTTCEEEECCCBS--S-TTCCEEEEEETTTEEECCCSSSCEEET-TT--EEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred EEecCCCccEEEeeccC--C-CCcEEEEEhhcCCCccccCCCcccccC-Cc--cEEEccCChhcCceEEEEEEECCeeEE
Confidence 37899 9999999985 4 668999988 477776554443322 22 488999999999999999998544333
Q ss_pred EE-EEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCC
Q psy2166 390 TR-ATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD 468 (805)
Q Consensus 390 ~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (805)
+. +.|.|..
T Consensus 92 s~~~~l~v~~---------------------------------------------------------------------- 101 (213)
T 2x1w_L 92 SIMYIVVVVG---------------------------------------------------------------------- 101 (213)
T ss_dssp CCCEEEEECB----------------------------------------------------------------------
T ss_pred EEEEEEEEeC----------------------------------------------------------------------
Confidence 22 4454421
Q ss_pred ceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc-eEE
Q psy2166 469 LVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR-YRT 547 (805)
Q Consensus 469 ~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~-~~~ 547 (805)
..+|.+...+.....+.+|++++|.|.+.+.+.+.+.++|+++|..+..... ...
T Consensus 102 ------------------------~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~ 157 (213)
T 2x1w_L 102 ------------------------YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRD 157 (213)
T ss_dssp ------------------------CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEE
T ss_pred ------------------------CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccc
Confidence 1234455555544358999999999999954455678999999986543211 101
Q ss_pred Ee-------eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEeeeeee
Q psy2166 548 FH-------DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL 594 (805)
Q Consensus 548 ~~-------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 594 (805)
.. ......|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..+|.+
T Consensus 158 ~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 158 LKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp ECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred cccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 00 122457999999999999999999999999999999999887754
No 158
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.83 E-value=5.9e-20 Score=177.24 Aligned_cols=177 Identities=12% Similarity=0.083 Sum_probs=131.2
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCC-----ceEEEEE-CCEecCCCCceEEEecC---cEEEEEEcccccCCCeEEEEE
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPN-----LKIEWIF-NGKPLELGSRFKTTADF---GFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~-----~~v~W~k-~g~~i~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
++..+.+.+|+.++|.|.+. +.|. +.|.|+| ++......+|+.+..+. +..+|.|.+++.+|+|.|+|.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~--~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFD--RRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85 (202)
T ss_dssp SCSEEEEETTSCEEEEEEEC--TTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEec--CCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEE
Confidence 34467899999999999998 5555 8999999 66666666777766542 556899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
+.|..+.......|.|..++ ..|.+.. ..+.+|+.+.
T Consensus 86 ~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~~~~-----~~~~~g~~v~ 122 (202)
T 3bp6_B 86 VICGAAWDYKYLTVKVKASY--------------------------------------MRIDTRI-----LEVPGTGEVQ 122 (202)
T ss_dssp EEETTEEEEEEEEEEEEBCC--------------------------------------CCEEEEE-----EECTTTCCEE
T ss_pred EEeCCCcceEEEEEEecCCC--------------------------------------CcccEEE-----EecCCCCeEE
Confidence 99998888777888876432 1222221 1256899999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEec
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 297 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 297 (805)
|.|.+ .|.|.|.+.|++++..+.. .......+....+.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 123 l~C~~--~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 123 LTCQA--RGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEEEE--EEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEEc--cccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 99998 5789999999998875431 11111112235677888899999999999999999988888877643
No 159
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.83 E-value=1.6e-20 Score=176.74 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=59.8
Q ss_pred ccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCc-cEEEEEE
Q psy2166 703 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG-QAEISVN 781 (805)
Q Consensus 703 ~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~ 781 (805)
.+.+|+.+.|.|.+. .+.|.+.+.|+|+|..+..... .+ .|.|.+++.+|+|.|+|.|.|..| ..+..+.
T Consensus 96 ~~~~g~~~~l~C~~~-~~~p~~~~~W~~~g~~~~~~~~------~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~ 166 (176)
T 1f2q_A 96 VVMEGQPLFLRCHGW-RNWDVYKVIYYKDGEALKYWYE------NH--NISITNATVEDSGTYYCTGKVWQLDYESEPLN 166 (176)
T ss_dssp EEETTSCEEEEEEEG-GGCCEEEEEEEETTEECCSCCC------SS--EEEESSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred eeeCCCCEEEEEEec-CCCCceEEEEEECCEEEeeecC------CC--eEEECCCCcccCEEEEEEEEeCCcceEecCEE
Confidence 678999999999994 2678889999999998854321 22 799999999999999999999755 4445567
Q ss_pred EEEEE
Q psy2166 782 LECVV 786 (805)
Q Consensus 782 l~V~~ 786 (805)
|.|..
T Consensus 167 l~V~~ 171 (176)
T 1f2q_A 167 ITVIK 171 (176)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77754
No 160
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=2.6e-19 Score=169.90 Aligned_cols=164 Identities=21% Similarity=0.315 Sum_probs=126.7
Q ss_pred ccCCCeEEEEEEEeecCCCCc--EEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPEL--KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRAT 393 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 393 (805)
+.+|+.++|.|.+. +.|.+ .+.|+++|..+....... ....|.|. ..+|+|.|+|.|.|.. ...+.
T Consensus 10 v~~G~~v~l~C~~~--~~~~p~~~~~W~k~~~~l~~~~~~~-----~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~ 77 (184)
T 3b5h_A 10 EDLGSKILLTCSLN--DSATEVTGHRWLKGGVVLKEDALPG-----QKTEFKVD--SDDQWGEYSCVFLPEP---MGTAN 77 (184)
T ss_dssp EEETTEEEEEEEEE--SCSSCCCEEEEESSSEEEECTTCCC-----SEEEEEEC--GGGCCEEEEEEEESTT---SCEEE
T ss_pred EecCCCEEEEEECC--CCCCCceEEEEEeCCEEeecccccC-----CcEEEEEe--chhhCeEEEEEEECCc---CcEEE
Confidence 67899999999998 55555 999999999887554321 23356666 6899999999999832 24455
Q ss_pred EEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEE
Q psy2166 394 IKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCEL 473 (805)
Q Consensus 394 l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 473 (805)
|.|.
T Consensus 78 l~V~---------------------------------------------------------------------------- 81 (184)
T 3b5h_A 78 IQLH---------------------------------------------------------------------------- 81 (184)
T ss_dssp EEEC----------------------------------------------------------------------------
T ss_pred EEEe----------------------------------------------------------------------------
Confidence 5552
Q ss_pred eecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC-CcEEEEEE---CC-EEccC--CCceE
Q psy2166 474 FSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP-DLVVEWFY---NG-KKLPH--GHRYR 546 (805)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p-~~~v~W~~---~g-~~l~~--~~~~~ 546 (805)
.+|.+...+... .+.+|+.++|.|.+. +.| .+.+.|++ +| ..+.. ..++.
T Consensus 82 --------------------~~P~~~~~~~~~-~~~~g~~~~l~C~~~--g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~ 138 (184)
T 3b5h_A 82 --------------------GPPRVKAVKSSE-HINEGETAMLVCKSE--SVPPVTDWAWYKITDSEDKALMNGSESRFF 138 (184)
T ss_dssp --------------------CSCCCEESCSEE-EECTTSCEEEEEECC--CSSCCCEEEEEECCSSSCEECCTTGGGTEE
T ss_pred --------------------cCCceeecCCCc-EEcCCCcEEEEEEEC--CCCCCCeEEEEEcCCCCCEEeecCCCCEEE
Confidence 455555554333 388999999999998 667 79999999 44 44433 26788
Q ss_pred EEeeCCEEEEEEccCC-CCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 547 TFHDFGIVILDILYCY-EENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 547 ~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
+..++....|.|.+++ .+|+|.|+|.|.|..|.....+.|.|..
T Consensus 139 ~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 139 VSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 8878888899999999 8999999999999999999999988864
No 161
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.83 E-value=5.7e-20 Score=176.29 Aligned_cols=174 Identities=8% Similarity=0.063 Sum_probs=115.0
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+.+|.|...+. ..|.+|++++|.|.+. +.|. .|.|+|+|..+....+. .........|.|.+++.+|+|.|+|.
T Consensus 3 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~--~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 2d3v_A 3 LSKATLWAEPG--SVISRGNSVTIRCQGT--LEAQ-EYRLVKEGSPEPWDTQN-PLEPKNKARFSIPSMTEHHAGRYRCY 76 (196)
T ss_dssp CCBCEEEEESC--SEEETTCCEEEEEECC--TTCC-EEEEEETTCSSCSEEEC-CCSSTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCC--CcccCCCeEEEEEeCC--CCCc-EEEEEECCCCCCccccc-ccCCccccEEEeccCChhHCeEEEEE
Confidence 46788877665 3889999999999988 4554 99999999877532110 11123455899999999999999999
Q ss_pred EEeCCeeEE--EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCce
Q psy2166 143 AWNLAGETF--TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI 220 (805)
Q Consensus 143 a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~ 220 (805)
|.|..|... ....|.|.... .+|.+...+. ..+.+|+.
T Consensus 77 a~n~~g~~~~s~~~~l~V~~~~--------------------------------------~~p~i~~~~~--~~v~~G~~ 116 (196)
T 2d3v_A 77 YYSPAGWSEPSDPLELVVTGFY--------------------------------------NKPTLSALPS--PVVTSGEN 116 (196)
T ss_dssp EEETTEECBCCCCEEEEEECSS--------------------------------------CCCEEEC-------------
T ss_pred EeCCCCcCCcCccEEEEecCCC--------------------------------------CCCeEEccCC--ccccCCCc
Confidence 999876433 34556665321 2355544332 24789999
Q ss_pred EEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE--EcCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 221 AHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH--AFGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 221 ~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
++|.|.+ .+.| +.+.|+|+|..+.......... ......|.|.+++.+|+|.|+|.|.|..+
T Consensus 117 v~L~C~~--~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 117 VTLQCGS--RLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp CEEEEEE--SSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred EEEEEEc--CCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 9999998 6777 8999999998775322111111 11246899999999999999999999765
No 162
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=2.4e-20 Score=179.92 Aligned_cols=186 Identities=19% Similarity=0.316 Sum_probs=136.6
Q ss_pred CeEEecCCCCceecCCCcEEEEEE-EecCCCCC-ceEEEEECCEecC--CCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQ-VEPKNDPN-LKIEWIFNGKPLE--LGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~-~~~~~~p~-~~v~W~k~g~~i~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
|.|....+..+.+.+|+.++|.|. +. +.|. +.|.|+|++..+. ...+..+...++ +|.|.+++.+|+|.|+|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~--~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C 83 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPY--HFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG--NLYIANVEASDKGNYSC 83 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCS--EESSCCEEEEEESSTTCBCCCSSSEEECTTTC--CEEESSCCGGGCEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccc--cCCCceEEEEEECCceeeeeeCCCeEEEcCCC--eEEECcCCcccCeEEEE
Confidence 555556666789999999999999 66 5677 8999999998775 233333333333 79999999999999999
Q ss_pred EEEeCCeeEEE---EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC
Q psy2166 142 RAWNLAGETFT---STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 218 (805)
Q Consensus 142 ~a~n~~g~~~~---~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 218 (805)
.+.+..+.... ...+.+..... ....+|.+...+.. ..+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~p~~~~~~~~-~~~~~g 128 (201)
T 3s97_C 84 FVSSPSITKSVFSKFIPLIPIPERT----------------------------------TKPYPADIVVQFKD-VYALMG 128 (201)
T ss_dssp EEEEGGGTEEEECCCEEEEEECCSS----------------------------------CCCEEEEEEEECCC-EEEETT
T ss_pred EEEecCCCcchhhcccceeeccccc----------------------------------cCCCCCceEecCCc-eEEecC
Confidence 99997654433 22233321110 01134556655543 357899
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEe
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 296 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 296 (805)
+.++|.|.+ .+.|.+.+.|++++..+.....+ .. ....|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 129 ~~~~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~--~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 129 QNVTLECFA--LGNPVPDIRWRKVLEPMPSTAEI--ST--SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCEEEEEEE--EEESCCEEEEEETTBCCCTTCEE--ET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcEEEEEEc--cCCCCCceEEEeCCCcCCCceee--cC--CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 999999998 57788999999999987755322 11 23479999999999999999999999999888888774
No 163
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.82 E-value=2.2e-19 Score=168.66 Aligned_cols=167 Identities=16% Similarity=0.199 Sum_probs=121.8
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCce-EEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLK-IEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~-v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
..++|.+...+. ...+.+|+.++|.|.+. +.|.+. +.|+|+|..+.... .+|.|.+++.+|+|.|+
T Consensus 4 ~~~~p~i~~~p~-~~~v~~G~~v~L~C~~~--~~p~~~~~~W~~~~~~~~~~~----------~~L~i~~~~~~d~G~Y~ 70 (175)
T 1fnl_A 4 DLPKAVVFLEPQ-WYSVLEKDSVTLKCQGA--YSPEDNSTQWFHNESLISSQA----------SSYFIDAATVNDSGEYR 70 (175)
T ss_dssp CCCCCEEEEESC-CSEEETTCCEEEEEECC--CBTTBCCCEEEETTEEEESSC----------SEEEESSCCGGGCEEEE
T ss_pred CCCCCEEEEcCC-ceeeeCCCcEEEEeeCC--CCCCCcceEEEECCEEccCCc----------eEEEEeCCCcccCEEEE
Confidence 345677776665 56899999999999998 556555 88999998876432 27999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCce
Q psy2166 141 CRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI 220 (805)
Q Consensus 141 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~ 220 (805)
|.+.|..+ .....|.|..++ .+... .. ..+.+|+.
T Consensus 71 C~~~n~~~--s~~~~l~V~~~~-----------------------------------------~~~~~-~~-~~~~~g~~ 105 (175)
T 1fnl_A 71 CQTNLSTL--SDPVQLEVHIGW-----------------------------------------LLLQA-PR-WVFKEEDP 105 (175)
T ss_dssp EECSSSCC--CCCEEEEEECSS-----------------------------------------EEEEC-SC-SEEETTCC
T ss_pred EEeeCCcc--cccEEEEEeCCC-----------------------------------------ceeeC-CC-ceecCCCC
Confidence 99988544 334556664221 11111 11 23679999
Q ss_pred EEEEEEEeeCCC-CCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEEe
Q psy2166 221 AHFEASLIPVGD-QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECV 296 (805)
Q Consensus 221 ~~l~C~~~~~~~-p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~ 296 (805)
++|.|.+ .+. |.+.+.|+|+|..+... .....|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 106 ~~l~C~~--~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 106 IHLRCHS--WKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEEEEEE--CTTCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEc--CCCCCceEEEEEECCeEccCC--------CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 9999988 444 45699999999987321 12247999999999999999999997654 3455666654
No 164
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.82 E-value=4.2e-20 Score=185.04 Aligned_cols=184 Identities=16% Similarity=0.157 Sum_probs=127.9
Q ss_pred ecCCCCceecCCCcEEEEEEEecC-CCCCceEEEEECCEecC------------------------------CCCceEEE
Q psy2166 70 VPLKPEFKLGEAQPLHLEAQVEPK-NDPNLKIEWIFNGKPLE------------------------------LGSRFKTT 118 (805)
Q Consensus 70 ~~~~~~~~v~~G~~v~L~C~~~~~-~~p~~~v~W~k~g~~i~------------------------------~~~~~~~~ 118 (805)
..++..+.+.+|+.++|.|.+.+. ..|.+.|.|+|++.... ...|+.+.
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 85 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 85 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECS
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEec
Confidence 344447899999999999999842 27788999999875431 12233333
Q ss_pred ecCcEEEEEEcccccCCCeEEEEEEEeCCee-----EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCC
Q psy2166 119 ADFGFVTLDLTEVYDRDQGIYTCRAWNLAGE-----TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAG 193 (805)
Q Consensus 119 ~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 193 (805)
.+ +..+|.|.+++.+|+|.|+|.+.+..+. ......|.|..++
T Consensus 86 ~~-~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------------------------------- 133 (250)
T 2fbo_J 86 NL-AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT------------------------------- 133 (250)
T ss_dssp CT-TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS-------------------------------
T ss_pred cC-CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC-------------------------------
Confidence 32 2347999999999999999999997654 2456677775431
Q ss_pred CCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE--EEE----------------
Q psy2166 194 VPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI--RTV---------------- 255 (805)
Q Consensus 194 ~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~--~~~---------------- 255 (805)
.+|.+.........+.+|+.+.|.|.+ .+.|.|.+.|+|++..+...... ...
T Consensus 134 -------~~~~~~~~~~~~~~v~~g~~v~L~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (250)
T 2fbo_J 134 -------PSNNVHVSTAEVVQVDEGNDITMTCPC--TDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIA 204 (250)
T ss_dssp -------CCSCCEECCCSEEECCTTCCEEECCCE--ESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTT
T ss_pred -------CCCeEEEecCceEEecCCCcEEEEEEe--cCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEe
Confidence 233333333333357789999999998 67788899999999887653211 000
Q ss_pred ---EEcCeEEEEEcCCCCcccEEEEEEEEcCC---eeEEEEEEEE
Q psy2166 256 ---HAFGMVVLEILGTKIEDTGVYTCRATNKW---GQAEISVNLE 294 (805)
Q Consensus 256 ---~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~---g~~~~~~~l~ 294 (805)
...+...|.|.+++.+|+|.|+|.|.|.. +....++.|.
T Consensus 205 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 205 GRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp TSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred cccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEEe
Confidence 01122589999999999999999999944 4555555543
No 165
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.82 E-value=7.9e-21 Score=184.54 Aligned_cols=129 Identities=19% Similarity=0.209 Sum_probs=97.7
Q ss_pred EEEeccCCCCCcEEEEEEEEeCCcce--EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccC
Q psy2166 628 ILDILYCYEENSGVYECRATNKYGSD--VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 705 (805)
Q Consensus 628 ~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 705 (805)
.|.|.+++.+|+|.|+|.|.|..|.. ...+.|.|..+ |.+...+... .+.
T Consensus 69 ~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~---------------------------p~~~~~~~~~-~~~ 120 (209)
T 1nbq_A 69 GITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVP---------------------------PSKPTVNIPS-SAT 120 (209)
T ss_dssp EEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBC---------------------------CCCCCCCCBS-EEE
T ss_pred EEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecC---------------------------CcCCCccccc-cee
Confidence 39999999999999999999997643 44667777653 3333333344 688
Q ss_pred CCCeEEEEEEE-eecCCCCeEEEEEECCEEccCCCCe-------EEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEE
Q psy2166 706 EGEIAHFEASL-IPVGDQTMTVEFLYNGKPIEASHRI-------RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 777 (805)
Q Consensus 706 ~G~~~~l~C~~-~~~g~p~~~v~W~~~g~~l~~~~~~-------~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 777 (805)
+|+.+.|.|.+ . |.|.|.|.|+|+|..+....+. ..........|.|.++..+|+|.|+|.|.|..|...
T Consensus 121 ~g~~~~l~C~~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 121 IGNRAVLTCSEQD--GSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp TTSCEEECCCCCS--CBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred cCCEEEEEEeCCC--CCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccc
Confidence 99999999997 6 9999999999999988765432 011111223799999999999999999999999986
Q ss_pred EEEEEEEEE
Q psy2166 778 ISVNLECVV 786 (805)
Q Consensus 778 ~~~~l~V~~ 786 (805)
.+..+.|.+
T Consensus 199 ~s~~v~l~V 207 (209)
T 1nbq_A 199 TSNAVRMEA 207 (209)
T ss_dssp ECCCBCCEE
T ss_pred ccccEEEEE
Confidence 555555443
No 166
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.82 E-value=5.3e-19 Score=171.44 Aligned_cols=171 Identities=15% Similarity=0.166 Sum_probs=128.4
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecC-------------------CCCceEEEecCcEEEEEEcccccCC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLE-------------------LGSRFKTTADFGFVTLDLTEVYDRD 135 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~-------------------~~~~~~~~~~~~~~~L~I~~~~~~D 135 (805)
...+.+|+.++|.|... +.+.+.|.|+|++.... ...|+.+..++ +|.|.+++.+|
T Consensus 8 ~~~v~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D 82 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNL--PLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG---SLLFQMITMKD 82 (208)
T ss_dssp SSEEETTCCEEEEEECC--CSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS---CEEECSCCGGG
T ss_pred cceeecCCcEEEEEeCC--CCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC---eEEEccccccC
Confidence 35789999999999966 67888999999754222 12344444333 69999999999
Q ss_pred CeEEEEEEEeCC-eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 136 QGIYTCRAWNLA-GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 136 ~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
+|.|+|.+.+.. +.......|.|..++ ..|.+......
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~i~~~~~~--- 121 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQPV--------------------------------------TQPFLQVTNTT--- 121 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECCC--------------------------------------CCCEEEESCSS---
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccCC--------------------------------------CCCEEecCCce---
Confidence 999999999984 556666777776432 22444433322
Q ss_pred cCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEE-EEEEE
Q psy2166 215 LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNL 293 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l 293 (805)
+.+|+.+.|.|.+ .+.| +.+.|+++|..+....++.....+ ..|.|.+++.+|+|.|+|.|.|..|... ..++|
T Consensus 122 ~~~g~~v~l~C~~--~~~p-p~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l 196 (208)
T 3r4d_A 122 VKELDSVTLTCLS--NDIG-ANIQWLFNSQSLQLTERMTLSQNN--SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKL 196 (208)
T ss_dssp CCTTCCEEEEEEC--SCTT-CEEEEEETTEECCCCSSEEEETTT--TEEEESSCCGGGCEEEEEEEECTTCCEECCCEEE
T ss_pred EeeCCCEEEEEEC--CCCC-CceEEEECCEeCCCCCCeEEcCCC--CEEEEeccCHHhCeEEEEEEecCCCcccCCceee
Confidence 7899999999998 5655 799999999999877776544333 4799999999999999999999998764 34555
Q ss_pred EEe
Q psy2166 294 ECV 296 (805)
Q Consensus 294 ~v~ 296 (805)
.|.
T Consensus 197 ~v~ 199 (208)
T 3r4d_A 197 DII 199 (208)
T ss_dssp CCC
T ss_pred eEE
Confidence 554
No 167
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.82 E-value=5e-19 Score=170.13 Aligned_cols=174 Identities=13% Similarity=0.143 Sum_probs=124.1
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC-EEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG-KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATI 394 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g-~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 394 (805)
+.+|+.++|.|.+. |.|.+.|.|+++. ..+. .. ....+....|.|.++..+|+|.|+|.|.|..|.....+.|
T Consensus 13 ~~~G~~v~L~C~~~--g~P~p~i~W~~~~~~~~~--~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l 86 (202)
T 1vca_A 13 AQIGDSVSLTCSTT--GCESPFFSWRTQIDSPLN--GK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQV 86 (202)
T ss_dssp EETTSCEEEEEEEE--SCSSCEEEEEETTCCCCS--SE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EcCCCcEEEEEeec--CCCCCeEEEECCCCCCcc--ce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEE
Confidence 55899999999998 7899999999842 2221 11 2223345579999999999999999999999888777888
Q ss_pred EEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEe
Q psy2166 395 KCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELF 474 (805)
Q Consensus 395 ~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 474 (805)
.|..+|.
T Consensus 87 ~V~~~p~------------------------------------------------------------------------- 93 (202)
T 1vca_A 87 EIYSFPK------------------------------------------------------------------------- 93 (202)
T ss_dssp EEEBCCS-------------------------------------------------------------------------
T ss_pred EEEeCCC-------------------------------------------------------------------------
Confidence 8764321
Q ss_pred ecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC--cEEEEEECCEEccCCCceEE----E
Q psy2166 475 SNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD--LVVEWFYNGKKLPHGHRYRT----F 548 (805)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~--~~v~W~~~g~~l~~~~~~~~----~ 548 (805)
.+..... ..+.+|+.++|.|.+.+ +.|. +.|+|+|+|..|........ .
T Consensus 94 ----------------------~~~~~~~--~~~~~G~~~~L~C~~~~-~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~ 148 (202)
T 1vca_A 94 ----------------------DPEIHLS--GPLEAGKPITVKCSVAD-VYPFDRLEIDLLKGDHLMKSQEFLEDADRKS 148 (202)
T ss_dssp ----------------------CCEEEES--SCEETTSCEEEEEEEEE-EBSGGGEEEEEEETTEEEEEEECCSCCSSCC
T ss_pred ----------------------CCEeCCc--eEEcCCCCEEEEEEECC-cCCCCCeEEEEEeCCeECcccccccccCcCc
Confidence 1111222 23889999999999995 3343 58999999998853210000 0
Q ss_pred eeCCEEEEEEccCCCCCCEEEEEEEEcCCcc-------eEEEEEEEEeeeee
Q psy2166 549 HDFGIVILDILYCYEENSGVYECRATNKYGS-------DVTKASLKCVSKTN 593 (805)
Q Consensus 549 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~-------~~~~~~l~V~~~~~ 593 (805)
.......|.|.....+|.|.|+|.|.|..|. ...+..|.|..+|.
T Consensus 149 ~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 149 LETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred ceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 0112445788888888999999999998876 35677888887764
No 168
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.82 E-value=2.1e-19 Score=175.00 Aligned_cols=178 Identities=13% Similarity=0.193 Sum_probs=129.6
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec------------CCCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
.+.+.+|+.++|.|.+. +.+.+.|.|+|. +... ....|+.+...++..+|.|.+++.+|+|.|+
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (213)
T 3mj8_L 9 LVSVALGQKATITCSGD--KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYY 86 (213)
T ss_dssp EEEEETTSCEEEEEECS--STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred cEEEeCCCCEEEEEEcC--CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEE
Confidence 67899999999999998 688899999992 2211 1345788777777889999999999999999
Q ss_pred EEEEeCCe---eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 141 CRAWNLAG---ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 141 C~a~n~~g---~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|.|.+..+ .......|.|...+ ..+|.+...+.... +.+
T Consensus 87 C~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~~~~~~~-~~~ 128 (213)
T 3mj8_L 87 CQSWDGTNSAWVFGSGTKVTVLGQP-------------------------------------NAAPSVTLFPPSSE-ELK 128 (213)
T ss_dssp EEEEETTTTEEEEBCCEEEEEECSC-------------------------------------CBCCEEEEECCCHH-HHT
T ss_pred EEeccCCcceeEEcCceEEEEeCCC-------------------------------------CCCCeEEccCCCcc-ccc
Confidence 99999876 33445667775321 13466665554443 448
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE-EEEcC----eEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEE
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-VHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 292 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~-~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 292 (805)
|+.++|.|.+.....+.+.+.|+|+|..+........ ...++ ...|.|.++..+|+|.|+|.|.|..+....++.
T Consensus 129 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 129 TNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 9999999998532233359999999999865321100 01222 246999999999999999999999876665543
No 169
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.82 E-value=1.5e-19 Score=170.09 Aligned_cols=168 Identities=14% Similarity=0.169 Sum_probs=121.9
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCc-eEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNL-KIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.++|.+...+. .+.+.+|+.++|.|.+. +.+.+ .+.|+|++..+.... .+|.|.+++.+|+|.|+|
T Consensus 2 ~~~P~i~~~p~-~~~v~~G~~v~L~C~~~--~~~~~~~i~W~~~~~~~~~~~----------~~L~i~~v~~~d~G~Y~C 68 (176)
T 1f2q_A 2 PQKPKVSLNPP-WNRIFKGENVTLTCNGN--NFFEVSSTKWFHNGSLSEETN----------SSLNIVNAKFEDSGEYKC 68 (176)
T ss_dssp --CCCCEEESS-CSEEETTCCEEEECCTT--CC----CCEEEETTEECSCCS----------SEEEECSCCGGGCEEEEE
T ss_pred CCCCEEEcCCC-CcceecCCcEEEEEeCC--CCCCcceEEEEECCeECCCCc----------eEEEEeccceecCEEEEE
Confidence 35677776665 57899999999999998 45553 699999999887532 279999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceE
Q psy2166 142 RAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIA 221 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~ 221 (805)
.+.|..+.. ...|.|... +.+...+ . ..+.+|+.+
T Consensus 69 ~~~~~~~s~--~~~l~V~~~-----------------------------------------~~~~~~~-~-~~~~~g~~~ 103 (176)
T 1f2q_A 69 QHQQVNESE--PVYLEVFSD-----------------------------------------WLLLQAS-A-EVVMEGQPL 103 (176)
T ss_dssp ECTTSSCCC--CEEEEEECS-----------------------------------------SEEEEES-C-SEEETTSCE
T ss_pred EcCCccccc--cEEEEEeCc-----------------------------------------ceeecCC-c-ceeeCCCCE
Confidence 998865433 445555421 1111111 1 136799999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEEec
Q psy2166 222 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECVD 297 (805)
Q Consensus 222 ~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~ 297 (805)
.|.|.+. .+.|.+.+.|+|+|..+.... ....|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|..
T Consensus 104 ~l~C~~~-~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 104 FLRCHGW-RNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp EEEEEEG-GGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEec-CCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEec
Confidence 9999883 356778999999999885332 1247999999999999999999996443 34557777764
No 170
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.81 E-value=1.2e-19 Score=181.76 Aligned_cols=79 Identities=18% Similarity=0.139 Sum_probs=61.7
Q ss_pred ccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCe----------------------EEEeeCcEEEEEEcCCCCC
Q psy2166 703 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI----------------------RTVHAFGMVVLEILGTKIE 760 (805)
Q Consensus 703 ~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~----------------------~~~~~~~~~~L~i~~v~~~ 760 (805)
.+.+|+.+.|.|.+. |.|.|.|+|+|++..+...... ...... ...|.|.+++.+
T Consensus 147 ~v~~g~~v~L~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~ 223 (250)
T 2fbo_J 147 QVDEGNDITMTCPCT--DCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSG-ARNLVIRAAKIT 223 (250)
T ss_dssp ECCTTCCEEECCCEE--SCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEET-TTEEEECSCCGG
T ss_pred EecCCCcEEEEEEec--CCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCC-ccEEEEecCCcc
Confidence 788999999999999 9899999999999987653211 111111 137999999999
Q ss_pred CCEEEEEEEEc---CCccEEEEEEEEE
Q psy2166 761 DTGVYTCRATN---KWGQAEISVNLEC 784 (805)
Q Consensus 761 d~G~Y~C~a~N---~~G~~~~~~~l~V 784 (805)
|+|.|+|.|.| .+|....++.|.|
T Consensus 224 D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 224 DAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp GCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred cCEEEEEEecCCccccCccceeEEEeC
Confidence 99999999999 5666777666654
No 171
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.81 E-value=3.7e-19 Score=170.94 Aligned_cols=173 Identities=10% Similarity=0.081 Sum_probs=117.1
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCce-EEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRF-KTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
+++|.|...+. ..+.+|++++|.|.+. +.|. .|.|+|+|..+....+. ..... ...|.|.+++.+|+|.|+|
T Consensus 3 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~--~~~~-~~~W~k~g~~~~~~~~~~~~~~~--~~~L~i~~v~~~D~G~Y~C 75 (198)
T 1ugn_A 3 LPKPTLWAEPG--SVITQGSPVTLRCQGG--QETQ-EYRLYREKKTAPWITRIPQELVK--KGQFPIPSITWEHTGRYRC 75 (198)
T ss_dssp CCCCEEEEESC--SEEETTCCEEEEEECC--TTCC-CEEEEESSSCCHHHHTSCHHHHT--TTEEEESSCCGGGCEEEEE
T ss_pred CCCCeEeccCC--CcccCCCcEEEEEEec--CCCc-EEEEEECCccccccccccccCCc--ccEEEECCCCHHHCeEEEE
Confidence 56788876654 4889999999999998 4554 69999999877421110 00111 2279999999999999999
Q ss_pred EEEeCC-ee--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC
Q psy2166 142 RAWNLA-GE--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 218 (805)
Q Consensus 142 ~a~n~~-g~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 218 (805)
.|.|.. |. ......|.|...+ .+|.+...+. ..+.+|
T Consensus 76 ~a~n~~~g~~~~s~~~~l~V~~~~--------------------------------------~~p~i~~~~~--~~v~~G 115 (198)
T 1ugn_A 76 YYGSDTAGRSESSDPLELVVTGAY--------------------------------------IKPTLSAQPS--PVVNSG 115 (198)
T ss_dssp EEEETTTEECCCCCCEEEEEECSS--------------------------------------CCCEEEEESC--SEEETT
T ss_pred EEECCCCCcccCCccEEEEEcccc--------------------------------------cCCccccCCc--cccCCC
Confidence 999987 53 2345666665421 2344443322 247799
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE-EEEE-EcCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI-RTVH-AFGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~-~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
+.++|.|.+ .+. .+.+.|+|+|..+...... .... ......|.|.+++.+|+|.|+|.|.|..+
T Consensus 116 ~~v~L~C~~--~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 116 GNVTLQCDS--QVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CCEEEEEEC--SSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CcEEEEEec--CCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 999999988 555 6799999999887543221 1111 12357899999999999999999999764
No 172
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.81 E-value=1.1e-19 Score=177.27 Aligned_cols=174 Identities=18% Similarity=0.275 Sum_probs=129.5
Q ss_pred CCceecCCCcEEEEEEEecCCCC----CceEEEEE----------------CCEecCC-----CCceEEEe---cCcEEE
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDP----NLKIEWIF----------------NGKPLEL-----GSRFKTTA---DFGFVT 125 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p----~~~v~W~k----------------~g~~i~~-----~~~~~~~~---~~~~~~ 125 (805)
..+.+.+|+.++|.|.+.+ .+ .+.|.|+| ++..+.. ..|+.+.. ..+..+
T Consensus 8 ~~v~v~~G~~v~L~C~~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTL--SPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp EEEEEETTSCEEECCBCCC--CTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred ceEEEecCCCEEEEEEEec--CCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 3578999999999999984 44 57999998 5554432 44665543 223457
Q ss_pred EEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCce
Q psy2166 126 LDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQF 205 (805)
Q Consensus 126 L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 205 (805)
|.|.+++.+|+|.|+|.+.|..|.......|.|..++.+
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~----------------------------------------- 124 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSG----------------------------------------- 124 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBS-----------------------------------------
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCC-----------------------------------------
Confidence 999999999999999999999988888888888754322
Q ss_pred ecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECC--EEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcC
Q psy2166 206 TSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--KPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK 283 (805)
Q Consensus 206 ~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g--~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 283 (805)
...+... .+.+|+.++|.|.+. .+.|.+.+.|++++ ..+...... ......|.|.+++.+|+|.|+|.|.|.
T Consensus 125 ~~~~~~~-~~~~g~~v~l~C~~~-~g~p~~~v~W~~~~~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 198 (214)
T 3jz7_A 125 TRCFVDG-SEEIGNDFKLKCEPK-EGSLPLQFEWQKLSDSQTMPTPWLA----EMTSPVISVKNASSEYSGTYSCTVQNR 198 (214)
T ss_dssp CEEEEES-CCBTTCCEEEEEECS-BCCSSCEEEEEECSTTCCCCGGGGG----GTTSSEEEECSCCGGGCEEEEEEEECS
T ss_pred ceeeeec-ceecCCcEEEEecCC-CCCCCCEEEEEECCCCCccCcccee----ccCCCEEEEecCCHHHCEEEEEEEEcC
Confidence 1111111 267899999999874 48888999999954 333322111 111237999999999999999999999
Q ss_pred CeeEEEEEEEEEe
Q psy2166 284 WGQAEISVNLECV 296 (805)
Q Consensus 284 ~g~~~~~~~l~v~ 296 (805)
.|..+..+.|.|.
T Consensus 199 ~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 199 VGSDQCMLRLDVV 211 (214)
T ss_dssp SCEEEEEEEECCB
T ss_pred CCcEEEEEEEEEe
Confidence 9999888888775
No 173
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.81 E-value=1.1e-19 Score=176.82 Aligned_cols=171 Identities=9% Similarity=0.026 Sum_probs=121.6
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEE--EEEEcccccCCCeEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFV--TLDLTEVYDRDQGIY 139 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~--~L~I~~~~~~D~G~Y 139 (805)
...+|.+...+. ..+.+|++++|.|.+. + +.+.|.|+|||..+....+ ......... .|.|.+++.+|+|.|
T Consensus 6 ~~~~P~i~~~p~--~~v~~G~~vtL~C~~~--~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y 79 (218)
T 1uct_A 6 DFPMPFISAKSS--PVIPLDGSVKIQCQAI--R-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRY 79 (218)
T ss_dssp GSCCCCEEESSC--SEEETTCCEEEEECCC--T-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEE
T ss_pred CCCCCEEEecCC--CccCCCCCEEEEEEcC--C-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEE
Confidence 456788877664 4789999999999987 3 5789999999876543222 111111223 799999999999999
Q ss_pred EEEEEeCCeeEE--EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 140 TCRAWNLAGETF--TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 140 ~C~a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
+|.+.|..|... ....|.|.... .+|.+...+.. .+.+
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~~~--------------------------------------~~P~i~~~p~~--~v~~ 119 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTGLY--------------------------------------GKPFLSADRGL--VLMP 119 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEECSS--------------------------------------CCCEEEESSCS--EECT
T ss_pred EEEEEcCCCceeecCCEEEEEcCcc--------------------------------------cCCEEEeCCCC--ccCC
Confidence 999999765333 23455554311 23555544422 4789
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
|+.++|.|.. .+.|.+.+.|+|+|..+... . ........|.|.+++.+|+|.|+|.|.|..
T Consensus 120 G~~v~L~C~~--~~~~~~~~~W~k~g~~~~~~--~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 120 GENISLTCSS--AHIPFDRFSLAKEGELSLPQ--H--QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp TCCCEEEEEC--SSSCCSEEEEEETTCSSCCS--E--EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCEEEEEeC--CCCCCCEEEEEECCCccccc--c--cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 9999999965 46677899999999877542 1 122345689999999999999999999853
No 174
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.81 E-value=1.4e-19 Score=169.69 Aligned_cols=137 Identities=13% Similarity=0.228 Sum_probs=108.1
Q ss_pred CCCeEEEEECCEEcc----------CCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcce--EEEEEEEEeeccc
Q psy2166 599 QLPEVEWFYNGKKLP----------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD--VTKASLKCVSKTN 666 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~----------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~p~ 666 (805)
+.|.|.|+|++..+. ...++.+..++. |.|.+++.+|+|.|+|.|.|..|.. ...+.|.|..++
T Consensus 26 ~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gs---L~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~- 101 (176)
T 1hng_A 26 DIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD---LKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMV- 101 (176)
T ss_dssp TEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSC---EEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCC-
T ss_pred ccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCc---EEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCC-
Confidence 356899999997652 345666644443 9999999999999999999999987 667788887532
Q ss_pred cccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEee
Q psy2166 667 LILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA 746 (805)
Q Consensus 667 ~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~ 746 (805)
.+|.+.. .+..+.|.|.+. |.|.|.|+|+|+|+.+..+.+
T Consensus 102 -----------------------~~p~i~~---------~~~~v~L~C~~~--g~p~p~i~W~~~g~~l~~~~~------ 141 (176)
T 1hng_A 102 -----------------------SKPMIYW---------ECSNATLTCEVL--EGTDVELKLYQGKEHLRSLRQ------ 141 (176)
T ss_dssp -----------------------CCCEEEE---------ETTTTEEEEECS--SCSSCEEEEEETTEEEEEESS------
T ss_pred -----------------------CCCEEEe---------cCCcEEEEEEec--CCCCcEEEEEECCEECCCCCc------
Confidence 3455442 234589999998 999999999999998876544
Q ss_pred CcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEE
Q psy2166 747 FGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 784 (805)
Q Consensus 747 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 784 (805)
+.|.++..+|+|.|+|.|.|.+|..+..+.|.|
T Consensus 142 -----~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 142 -----KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp -----SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred -----EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 334467799999999999999999999887765
No 175
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.81 E-value=8.2e-20 Score=171.30 Aligned_cols=158 Identities=11% Similarity=0.149 Sum_probs=118.1
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecC----------CCCceEEEecCcEEEEEEcccccCCCeEEEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLE----------LGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAW 144 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~----------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 144 (805)
.+.+.+|+.++|.|.......+.+.|.|+|++..+. ...|+.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~ 81 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVY 81 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEE
Confidence 356789999999995432236677999999997552 45677775544 59999999999999999999
Q ss_pred eCCeeE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 145 NLAGET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 145 n~~g~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
|..|.. .....|.|..+. ..|.+.. .+..++
T Consensus 82 n~~g~~~~~~~~~l~V~~~~--------------------------------------~~p~i~~---------~~~~v~ 114 (176)
T 1hng_A 82 STNGTRILNKALDLRILEMV--------------------------------------SKPMIYW---------ECSNAT 114 (176)
T ss_dssp ETTCCEEEEEEEEEEEECCC--------------------------------------CCCEEEE---------ETTTTE
T ss_pred eCCCCEEEEEEEEEEEeCCC--------------------------------------CCCEEEe---------cCCcEE
Confidence 998886 555666665421 2233322 234589
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEE
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 295 (805)
|.|.+ .+.|.|.|.|+|+|..+....+ +.|.+++.+|+|.|+|.|.|..|.......|.+
T Consensus 115 L~C~~--~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 115 LTCEV--LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEEEC--SSCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEe--cCCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 99988 7888899999999998765443 334466799999999999999998887766543
No 176
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=1.8e-19 Score=171.36 Aligned_cols=169 Identities=13% Similarity=0.132 Sum_probs=119.8
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+++|.+...+.. .+.+|++|+|.|.+. + +.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.
T Consensus 2 l~~P~i~~~p~~--~v~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 75 (188)
T 1oll_A 2 LPKPFIWAEPHF--MVPKEKQVTICCQGN--Y-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCI 75 (188)
T ss_dssp CCCCEEEEESCS--EEETTCCEEEEEECC--T-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEeecCC--cCCCCCCEEEEEecC--C-CCCEEEEEECCCccccccc-ccCCCcceeEEEeCcCCcccCeEEEEE
Confidence 356777776653 799999999999987 3 4568999999987642110 001122345899999999999999999
Q ss_pred EEeCCeeE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCce
Q psy2166 143 AWNLAGET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI 220 (805)
Q Consensus 143 a~n~~g~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~ 220 (805)
+.|..+.. .....|.|.... .+|.+...+. . .+.+|+.
T Consensus 76 ~~~~~~~~~~s~~~~l~V~~~~--------------------------------------~~p~i~~~p~-~-~v~~G~~ 115 (188)
T 1oll_A 76 YRVGELWSEPSNLLDLVVTEMY--------------------------------------DTPTLSVHPG-P-EVISGEK 115 (188)
T ss_dssp EEETTEECCCCCCEEEEEESCS--------------------------------------CCCEEEEESC-S-EEETTCE
T ss_pred ecCCCCCCCCCCceEEEecccC--------------------------------------CCCeEEECCC-C-ccccCCE
Confidence 98875533 234556554311 2355554432 2 3789999
Q ss_pred EEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 221 AHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 221 ~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
++|.|.+ .+ +.+.+.|+|+|..+.. ..........|.|.+++.+|+|.|+|.|.|..
T Consensus 116 v~L~C~~--~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 116 VTFYCRL--DT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEEEEC--SS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred EEEEEEc--CC-CCCEEEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 9999986 44 4468999999976643 11223445789999999999999999998864
No 177
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.81 E-value=7.1e-20 Score=178.94 Aligned_cols=131 Identities=13% Similarity=0.105 Sum_probs=99.3
Q ss_pred EEEeccCCCCCcEEEEEEEEeCCcceEEEE-EEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q psy2166 628 ILDILYCYEENSGVYECRATNKYGSDVTKA-SLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 706 (805)
Q Consensus 628 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 706 (805)
.|.|.+++.+|+|.|.|.+.|..+...... .+.+.. .++.+....... .+..
T Consensus 80 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~-~~~~ 132 (218)
T 4frw_A 80 SVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLV--------------------------PPLPSLNPGPAL-EEGQ 132 (218)
T ss_dssp CEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB--------------------------CCCCEEEECSCE-ETTC
T ss_pred EEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEee--------------------------eccceeeeeeee-eeee
Confidence 499999999999999999998776555443 344432 223333344445 7889
Q ss_pred CCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEe-eCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 707 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 707 G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
|+.+.|.|.+. |.|+|.|+|+|+|..+.......... ......|.|.++..+|+|.|+|.|.|.+|.....++|+|.
T Consensus 133 ~~~~~~~c~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 133 GLTLAASCTAE--GSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp CSEEEEEEEEE--EBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred ccccceeeecc--CCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 99999999998 99999999999998776543322110 0113479999999999999999999999998888888887
Q ss_pred Ee
Q psy2166 786 VW 787 (805)
Q Consensus 786 ~~ 787 (805)
+.
T Consensus 211 V~ 212 (218)
T 4frw_A 211 VS 212 (218)
T ss_dssp EE
T ss_pred EC
Confidence 64
No 178
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.80 E-value=1.8e-18 Score=166.25 Aligned_cols=179 Identities=12% Similarity=0.110 Sum_probs=124.3
Q ss_pred EecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECC-EecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCC
Q psy2166 69 IVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG-KPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLA 147 (805)
Q Consensus 69 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g-~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 147 (805)
.+.++..+.+.+|+.++|.|.+. |.|.+.|.|+++. ..+. .+ ....+....|.|.+++.+|+|.|+|.|.|..
T Consensus 4 ~i~p~~~~~~~~G~~v~L~C~~~--g~P~p~i~W~~~~~~~~~--~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 77 (202)
T 1vca_A 4 ETTPESRYLAQIGDSVSLTCSTT--GCESPFFSWRTQIDSPLN--GK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCES 77 (202)
T ss_dssp EEESSSEEEEETTSCEEEEEEEE--SCSSCEEEEEETTCCCCS--SE--EEEETTEEEEEESSCCGGGCSEEEEEEEETT
T ss_pred EECCCCcEEEcCCCcEEEEEeec--CCCCCeEEEECCCCCCcc--ce--EEEcCCccEEEECcCCHHHCEEEEEEEEECC
Confidence 34444444556999999999998 6888899999943 2221 12 2223345579999999999999999999998
Q ss_pred eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEE
Q psy2166 148 GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASL 227 (805)
Q Consensus 148 g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 227 (805)
|.....+.|.|..++.. +.+. +. ..+.+|+.++|.|.+
T Consensus 78 ~~~~~~~~l~V~~~p~~--------------------------------------~~~~--~~--~~~~~G~~~~L~C~~ 115 (202)
T 1vca_A 78 RKLEKGIQVEIYSFPKD--------------------------------------PEIH--LS--GPLEAGKPITVKCSV 115 (202)
T ss_dssp EEEEEEEEEEEEBCCSC--------------------------------------CEEE--ES--SCEETTSCEEEEEEE
T ss_pred ceEeeEEEEEEEeCCCC--------------------------------------CEeC--Cc--eEEcCCCCEEEEEEE
Confidence 88877888888754321 1121 11 247899999999998
Q ss_pred eeCCCCC--eEEEEEECCEEccCCCcEEE----EEEcCeEEEEEcCCCCcccEEEEEEEEcCCee-------EEEEEEEE
Q psy2166 228 IPVGDQT--MTVEFLYNGKPIEASHRIRT----VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-------AEISVNLE 294 (805)
Q Consensus 228 ~~~~~p~--~~i~W~k~g~~l~~~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-------~~~~~~l~ 294 (805)
.. +.|. ++|.|+|+|..|........ ........|.|.....+|+|.|+|.|.|..+. .+.++.|.
T Consensus 116 ~~-~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~ 194 (202)
T 1vca_A 116 AD-VYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQ 194 (202)
T ss_dssp EE-EBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECC
T ss_pred CC-cCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEE
Confidence 53 2343 68999999998753211000 00112356788888889999999999997664 34566676
Q ss_pred Ee
Q psy2166 295 CV 296 (805)
Q Consensus 295 v~ 296 (805)
|.
T Consensus 195 V~ 196 (202)
T 1vca_A 195 VY 196 (202)
T ss_dssp EE
T ss_pred Ee
Confidence 66
No 179
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.80 E-value=1.2e-19 Score=153.36 Aligned_cols=97 Identities=24% Similarity=0.323 Sum_probs=90.8
Q ss_pred CCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 688 DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 688 ~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
...||.|...+.++ .+.+|+.+.|.|.+. |.|.|.|+|+|||+.|..+.++.+..+++..+|.|.++..+|+|.|+|
T Consensus 10 ~~~pP~f~~~p~~~-~v~~G~~~~l~C~~~--G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (107)
T 3knb_B 10 QGSPPCFLRFPRPV-RVVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCE-EEETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCCEEEeCCCcE-EEeCCCcEEEEEEEE--EecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEE
Confidence 34689999999999 999999999999999 999999999999999999999998888888999999999999999999
Q ss_pred EEEcCCccEEEEEEEEEEEe
Q psy2166 768 RATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~~~ 787 (805)
+|.|.+|..+.++.|+|+..
T Consensus 87 ~a~N~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 87 RARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EEEETTEEEEEEEEEEEEC-
T ss_pred EEEECCCEEEEEEEEEEEcC
Confidence 99999999999999999753
No 180
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.80 E-value=9.6e-19 Score=163.51 Aligned_cols=165 Identities=18% Similarity=0.231 Sum_probs=120.1
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCC-CceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDP-NLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
++|.+...+. ...+.+|+.++|.|.+. +.| .+.+.|+|+|..+..+.+ .|.|.+++.+|+|.|+|.
T Consensus 3 p~p~i~~~p~-~~~v~~G~~v~l~C~~~--~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~ 69 (170)
T 3ry4_A 3 PKAVLKLEPP-WINVLQEDSVTLTCQGA--RSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQ 69 (170)
T ss_dssp CBCEEEEESC-CSEEETTCEEEEEEESC--CCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEE
T ss_pred CCCEEEeCCC-CeEEECCCcEEEEEEec--CCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEE
Confidence 3455555544 56899999999999998 454 679999999999886533 366779999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
+.+..+. ....|.|...+ .+...+ . ..+.+|+.+.
T Consensus 70 ~~~~~~s--~~~~l~v~~~~-----------------------------------------~~~~~~-~-~~~~~g~~~~ 104 (170)
T 3ry4_A 70 TGQTSLS--DPVHLTVLFEW-----------------------------------------LVLQTP-H-LEFQEGETIM 104 (170)
T ss_dssp ETTSBCC--CCEEEEEECCS-----------------------------------------EEEECS-C-SEECTTCCEE
T ss_pred EeCCCce--EeEEEEEECCc-----------------------------------------eEecCC-C-ceeecCCeEE
Confidence 9875433 34556665322 111111 1 1367899999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEE
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-AEISVNLEC 295 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v 295 (805)
|.|.+. .+.|.+.+.|+++|..+... .....|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 105 l~C~~~-~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 105 LRCHSW-KDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EEEEEG-GGCCEEEEEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEECC-CCCCCceEEEEECCeEcccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 999884 35677999999999876422 12347999999999999999999999886 334444443
No 181
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.80 E-value=4.2e-19 Score=170.22 Aligned_cols=173 Identities=12% Similarity=0.084 Sum_probs=125.9
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+.. .+.+|+.++|.|.+ .+ +.+.+.|+|+|..+..... ..........|.|.+++.+|+|.|+|.+
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 3p2t_A 4 PKPTLWAEPGS--VISWGNSVTIWCQG--TL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYY 77 (196)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEccCCC--cCCCCCcEEEEeeC--CC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEE
Confidence 35777777665 48899999999987 45 6689999999987754211 1111134578999999999999999999
Q ss_pred EcCCee--EEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCce-EEEE
Q psy2166 281 TNKWGQ--AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV-KMVS 357 (805)
Q Consensus 281 ~n~~g~--~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~-~~~~ 357 (805)
.|..+. .+..+.|.|.... .+|.+...+.. .+.+|+.++|.|.+. + +.+.+.|+|+|..+...... ....
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~--~~p~~~~~~~~--~v~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~~~~~~ 150 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGAY--SKPTLSALPSP--LVTSGKSVTLLCQSR--S-PMDTFLLCKERAAHPLLCLRSEHGA 150 (196)
T ss_dssp EETTEEBCCCCCEEEEEECSS--CCCEEEEESCS--EECTTCCEEEEEEEE--E-EEEEEEEEETTCCCGGGSEEEEEEE
T ss_pred eCCCcccCCCccEEEEecCCC--CCCEEEeCCcc--eecCCCeEEEEEecC--C-CCCEEEEEeCCCcccceeecccccc
Confidence 998873 3445666665422 35666655443 378999999999997 4 34689999999877543322 1112
Q ss_pred eCcEEEEEEcccCcCCceEEEEEEEeCce
Q psy2166 358 DFGFVVMDIAYVQSHDSGEYVCRAWNKYG 386 (805)
Q Consensus 358 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 386 (805)
......|.|.++..+|+|.|+|.|.|..+
T Consensus 151 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 151 QQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred cCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 22345799999999999999999999876
No 182
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.80 E-value=6.5e-19 Score=171.54 Aligned_cols=175 Identities=14% Similarity=0.248 Sum_probs=128.2
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEEcc------------CCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKPIF------------HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+. +.+.+.+.|+|. +.... ...++.+........|.|.+++.+|+|.|+|.|
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (213)
T 3mj8_L 12 VALGQKATITCSGD--KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQS 89 (213)
T ss_dssp EETTSCEEEEEECS--STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EeCCCCEEEEEEcC--CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEe
Confidence 88999999999997 788999999982 22111 234666666777788999999999999999999
Q ss_pred EeCce---eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEE
Q psy2166 382 WNKYG---EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 458 (805)
Q Consensus 382 ~n~~g---~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (805)
.|..+ .....+.|.|...+
T Consensus 90 ~~~~~~~~~~~~~~~l~V~~~~---------------------------------------------------------- 111 (213)
T 3mj8_L 90 WDGTNSAWVFGSGTKVTVLGQP---------------------------------------------------------- 111 (213)
T ss_dssp EETTTTEEEEBCCEEEEEECSC----------------------------------------------------------
T ss_pred ccCCcceeEEcCceEEEEeCCC----------------------------------------------------------
Confidence 99887 33444666664211
Q ss_pred EEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEE
Q psy2166 459 ARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKK 538 (805)
Q Consensus 459 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~ 538 (805)
..+|.+...+.... +.+|+.++|.|.+.+...|++.|+|+|||..
T Consensus 112 ----------------------------------~~~P~i~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 156 (213)
T 3mj8_L 112 ----------------------------------NAAPSVTLFPPSSE-ELKTNQATLVCMINGFYPADVAVTWEADGTP 156 (213)
T ss_dssp ----------------------------------CBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred ----------------------------------CCCCeEEccCCCcc-cccCCcEEEEEEeeceeCCCeEEEEEcCCcc
Confidence 25677776665554 5599999999999953234469999999999
Q ss_pred ccCCCceEE-EeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEE
Q psy2166 539 LPHGHRYRT-FHDFG----IVILDILYCYEENSGVYECRATNKYGSDVTKAS 585 (805)
Q Consensus 539 l~~~~~~~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 585 (805)
+..+..... ...++ ...|.|.++..+|+|.|+|.|.|..+....++.
T Consensus 157 l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 157 ITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp ECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred cCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 965311100 00222 235999999999999999999999877665543
No 183
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.80 E-value=2.7e-19 Score=169.51 Aligned_cols=163 Identities=12% Similarity=0.087 Sum_probs=119.8
Q ss_pred CCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 61 ETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 61 ~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
....+|.+...+. ..+.+|++++|.|.+. + +.+.+.|+|+|... ...+ ..|.|.+++.+|+|.|+
T Consensus 4 ~~~~~P~i~~~p~--~~v~~G~~v~L~C~~~--~-~~~~~~W~k~g~~~--------~~~~--~~L~i~~v~~~D~G~Y~ 68 (184)
T 2gi7_A 4 GPLPKPSLQALPS--SLVPLEKPVTLRCQGP--P-GVDLYRLEKLSSSR--------YQDQ--AVLFIPAMKRSLAGRYR 68 (184)
T ss_dssp CCBCCCEEEEESC--SEEETTCCEEEEEECS--T-TCSEEEEEETTTCC--------EESS--SEEEESSCCGGGCEEEE
T ss_pred CCCCCCeEEeCCC--ccccCCCcEEEEEeCC--C-CCCEEEEEECCccc--------cCcc--cEEEECcCChhhCceEE
Confidence 3456788777665 3899999999999987 4 67899999998751 1111 27999999999999999
Q ss_pred EEEEeCCeeEE--EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC
Q psy2166 141 CRAWNLAGETF--TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 218 (805)
Q Consensus 141 C~a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 218 (805)
|.+.|..|... ....|.|.... .+|.+...+. . .+.+|
T Consensus 69 C~a~n~~g~~~~s~~~~l~V~~~~--------------------------------------~~p~i~~~p~-~-~v~~G 108 (184)
T 2gi7_A 69 CSYQNGSLWSLPSDQLELVATGVF--------------------------------------AKPSLSAQPG-P-AVSSG 108 (184)
T ss_dssp EEEEETTEEBCCCCCEEEEEESSS--------------------------------------CCCEEEEECC-C-SSCCT
T ss_pred EEEEcCCCccCCCCCEEEEecCcC--------------------------------------CCCEEEeCCC-c-eecCC
Confidence 99999876432 34556554311 2455555442 2 47899
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
+.++|.|.+ .+.+ +.+.|+|+|..+..... .......|.|.+++.+|+|.|+|.|.|..+
T Consensus 109 ~~v~l~C~~--~~~~-~~~~w~k~g~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 109 GDVTLQCQT--RYGF-DQFALYKEGDPAPYKNP----ERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TCEEEEEEC--SSCC-CEEEEEECCCCTTSCCC----CEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred CcEEEEEEc--CCCC-cEEEEEECCCcCcceec----CCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 999999986 4444 69999999988765322 112235699999999999999999999753
No 184
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.80 E-value=6e-20 Score=178.28 Aligned_cols=176 Identities=19% Similarity=0.253 Sum_probs=127.4
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEec------------CCCCceEEEecCcEEEEEEccccc
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPL------------ELGSRFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i------------~~~~~~~~~~~~~~~~L~I~~~~~ 133 (805)
+..+...+..+.+.+|+.++|.|.+. +.|.+.|.|+|++..+ ....|+.+.. .+|.|.+++.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~~ 77 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYS--GFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVTR 77 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEE--SCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCCT
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEe--CCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCCH
Confidence 34444555578899999999999998 6789999999987552 2234555543 3899999999
Q ss_pred CCCeEEEEEEEeCCee--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccc
Q psy2166 134 RDQGIYTCRAWNLAGE--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQH 211 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 211 (805)
+|+|.|+|.+.+..|. ......|.|..++.. ......
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~-----------------------------------------~~~~~~ 116 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSK-----------------------------------------PTVNIP 116 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEBCCCC-----------------------------------------CCCCCB
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEecCCcC-----------------------------------------CCcccc
Confidence 9999999999998653 344555666544321 111111
Q ss_pred ccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE-------EEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 212 LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI-------RTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 212 ~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
. .+.+|+.+.|.|.+. .+.|.+.+.|+++|..+...... ..........|.|.+++.+|+|.|+|.|.|..
T Consensus 117 ~-~~~~g~~~~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 194 (209)
T 1nbq_A 117 S-SATIGNRAVLTCSEQ-DGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGY 194 (209)
T ss_dssp S-EEETTSCEEECCCCC-SCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSS
T ss_pred c-ceecCCEEEEEEeCC-CCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCc
Confidence 1 367899999999853 58888999999999988764321 00111233579999999999999999999999
Q ss_pred eeEEEE
Q psy2166 285 GQAEIS 290 (805)
Q Consensus 285 g~~~~~ 290 (805)
|....+
T Consensus 195 g~~~~s 200 (209)
T 1nbq_A 195 GTPMTS 200 (209)
T ss_dssp SCCEEC
T ss_pred Cccccc
Confidence 887443
No 185
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=2.5e-19 Score=178.26 Aligned_cols=224 Identities=10% Similarity=0.058 Sum_probs=122.7
Q ss_pred cCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCce-EEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 63 FAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRF-KTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
+.+|.+...+. ..|.+|++|+|.|.+. .+.+.|.|+|||..+...... ..........|.|.+++.+|+|.|+|
T Consensus 5 ~~kP~i~~~P~--~~V~~G~~VtL~C~~~---~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C 79 (257)
T 1b6u_A 5 HRKPSLLAHPG--PLVKSEETVILQCWSD---VRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRC 79 (257)
T ss_dssp CCCCEECCBSC--SEEESSCCEEEEEEES---SCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEE
T ss_pred CCCCEEEEcCC--CEecCCCCEEEEEecC---CCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEE
Confidence 45677765443 5789999999999987 346789999998755321100 00111234589999999999999999
Q ss_pred EEEeCCe-----eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 142 RAWNLAG-----ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 142 ~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
.+.+..+ .......|.|.... .+|.+...+.. .+.
T Consensus 80 ~a~~~~~~~~~s~~S~~~~L~V~~~~--------------------------------------~~P~l~~~p~~--~V~ 119 (257)
T 1b6u_A 80 YGSVTHSPYQLSAPSDPLDIVITGLY--------------------------------------EKPSLSAQPGP--TVL 119 (257)
T ss_dssp EEECSSCTTSCCCCCCCEEEEEECSS--------------------------------------CCCEEECSSCT--TCB
T ss_pred eEeccCCCccccccCCCEEEecccCC--------------------------------------CCcceEccCCC--ccC
Confidence 9986431 22334556665321 23555554432 478
Q ss_pred CCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-EcCeEEEEEcCCCCcccEEEEEEEEcCCe-----eEEEE
Q psy2166 217 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCRATNKWG-----QAEIS 290 (805)
Q Consensus 217 ~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g-----~~~~~ 290 (805)
+|++++|.|.+ .+.+ +.+.|+|+|..+.......... ......|.|.+++ |+|.|+|.+.+... ..+..
T Consensus 120 ~G~~vtL~C~~--~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~p 194 (257)
T 1b6u_A 120 AGESVTLSCSS--RSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDP 194 (257)
T ss_dssp TTCEEEEEEEC--SSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCC
T ss_pred CCCEEEEEEeC--CCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCC
Confidence 99999999987 4443 6899999998765432211111 1124689999998 99999999997532 22344
Q ss_pred EEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECC
Q psy2166 291 VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG 344 (805)
Q Consensus 291 ~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g 344 (805)
+.|.|.. +|.+............|..+.|.|.+ |.+.+.+.|..-+
T Consensus 195 l~L~V~g-----~p~~~~p~~~~~~~~~g~~~~l~~~~---~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 195 LLVSVTG-----NPSNSWPSPTEPSSETGNPRHLHAAA---EQKLISEEDLNLD 240 (257)
T ss_dssp EEECCBC-----CC----------------------------------------
T ss_pred EEEEEec-----cCCCCCCCCcccCccCCCeEEEEEEE---cchHHHHHHhhhh
Confidence 5666653 33333111111125569999999998 7888889997543
No 186
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.80 E-value=2.1e-18 Score=161.92 Aligned_cols=166 Identities=18% Similarity=0.163 Sum_probs=122.8
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeE-EEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMT-VEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 279 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~-i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 279 (805)
.+|.+...+... .+.+|+.++|.|.+ .+.|.+. +.|+|+|..+... ...|.|.+++.+|+|.|+|.
T Consensus 6 ~~p~i~~~p~~~-~v~~G~~v~L~C~~--~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~ 72 (175)
T 1fnl_A 6 PKAVVFLEPQWY-SVLEKDSVTLKCQG--AYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQ 72 (175)
T ss_dssp CCCEEEEESCCS-EEETTCCEEEEEEC--CCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEEcCCce-eeeCCCcEEEEeeC--CCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEE
Confidence 457777777654 48899999999988 5666555 8999999887642 23799999999999999999
Q ss_pred EEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC-CcEEEEEECCEEccCCCceEEEEe
Q psy2166 280 ATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP-ELKVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 280 ~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p-~~~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
+.|..+. ..+.+.|. .++..... ... .+.+|+.++|.|.+. +.+ .+.+.|+|+|..+... ..
T Consensus 73 ~~n~~~s--~~~~l~V~-----~~~~~~~~-~~~-~~~~g~~~~l~C~~~--~~~~~~~~~W~k~g~~~~~~------~~ 135 (175)
T 1fnl_A 73 TNLSTLS--DPVQLEVH-----IGWLLLQA-PRW-VFKEEDPIHLRCHSW--KNTALHKVTYLQNGKDRKYF------HH 135 (175)
T ss_dssp CSSSCCC--CCEEEEEE-----CSSEEEEC-SCS-EEETTCCEEEEEEEC--TTCCCEEEEEEETTEEEEEE------EE
T ss_pred eeCCccc--ccEEEEEe-----CCCceeeC-CCc-eecCCCCEEEEEEcC--CCCCceEEEEEECCeEccCC------CC
Confidence 9986553 34555554 23333332 223 378999999999997 554 4699999999887321 11
Q ss_pred CcEEEEEEcccCcCCceEEEEEEEeCcee-eEEEEEEEEEe
Q psy2166 359 FGFVVMDIAYVQSHDSGEYVCRAWNKYGE-DFTRATIKCFG 398 (805)
Q Consensus 359 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~ 398 (805)
...|.|.++..+|+|.|+|.|.|..+. ....+.|.|.+
T Consensus 136 --~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 136 --NSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp --CCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred --CCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 225999999999999999999997664 34456777653
No 187
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.79 E-value=2e-18 Score=169.23 Aligned_cols=132 Identities=11% Similarity=0.074 Sum_probs=96.2
Q ss_pred EEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccC
Q psy2166 626 IVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 705 (805)
Q Consensus 626 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 705 (805)
...|.|.+++.+|+|.|+|.|.| .|.....+.|.|..++ ..|.+.. .. .+.
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~------------------------~~~~~~~---~~-~~~ 129 (222)
T 3sbw_C 79 NAALQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPY------------------------NKINQRI---LV-VDP 129 (222)
T ss_dssp EEEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCC------------------------CCCEEEE---EE-EET
T ss_pred EEEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCC------------------------CCCCcee---ee-eec
Confidence 45699999999999999999999 6777778888888543 1222211 12 567
Q ss_pred CCCeEEEEEEEeecCCCCeEEEEEEC-CEEccCCCCeEEE--eeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEE
Q psy2166 706 EGEIAHFEASLIPVGDQTMTVEFLYN-GKPIEASHRIRTV--HAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 782 (805)
Q Consensus 706 ~G~~~~l~C~~~~~g~p~~~v~W~~~-g~~l~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 782 (805)
+|+.++|.|.+. |.|.|.|+|+++ |..+......... .++....+.+..+..+|+|.|+|.|.|.+|....++.|
T Consensus 130 ~g~~v~L~C~~~--g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l 207 (222)
T 3sbw_C 130 VTSEHELTCQAE--GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAEL 207 (222)
T ss_dssp TTTEEEEEEEEE--EBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEEEec--CCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEE
Confidence 899999999998 899999999998 6666544332221 11222223333455789999999999999999999999
Q ss_pred EEEEeC
Q psy2166 783 ECVVWS 788 (805)
Q Consensus 783 ~V~~~~ 788 (805)
.|...|
T Consensus 208 ~v~~~p 213 (222)
T 3sbw_C 208 VIPELP 213 (222)
T ss_dssp ECCCC-
T ss_pred EecCCc
Confidence 987544
No 188
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.79 E-value=4.7e-19 Score=172.52 Aligned_cols=177 Identities=17% Similarity=0.150 Sum_probs=125.9
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|+.++|.|.+. +.|.+.|.|+|++ ..+ ....|+.+..+++..+|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 8 PATLSVTPGNSVSLSCRAS--QSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp CSEEEECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CccEEEeCCCcEEEEEECC--CCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEE
Confidence 4467899999999999998 5777889999853 221 12358888777778899999999999999
Q ss_pred EEEEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 139 YTCRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 139 Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|+|.|.|..+.... ...|.|.... .+|.+........ +.+
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~v~~~~~~~~-~~~ 126 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKRAD--------------------------------------AAPTVSIFPPSSE-QLT 126 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCC--------------------------------------BCCEEEEECCCHH-HHH
T ss_pred EEEeeecCCcceeCCCEEEEEecCC--------------------------------------CCceeEeECCChh-hcC
Confidence 99999998765433 3456664321 2455554333322 347
Q ss_pred CceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEE-EE--EcC----eEEEEEcCCCCcccEEEEEEEEcCCeeEEE
Q psy2166 218 GEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRT-VH--AFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEI 289 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~-~~--~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~ 289 (805)
|+.++|.|.+.. ..|.+ .+.|+|+|..+........ .. .++ .+.|.|.++..+|+|.|+|.|.|.......
T Consensus 127 g~~~~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 205 (213)
T 3d9a_L 127 SGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI 205 (213)
T ss_dssp TTEEEEEEEEEE-EBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCE
T ss_pred CCcEEEEEEEee-ecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCce
Confidence 889999999852 24554 8999999998876511110 00 111 248999999999999999999998765433
Q ss_pred EE
Q psy2166 290 SV 291 (805)
Q Consensus 290 ~~ 291 (805)
..
T Consensus 206 ~~ 207 (213)
T 3d9a_L 206 VK 207 (213)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 189
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.79 E-value=2.7e-19 Score=171.58 Aligned_cols=174 Identities=10% Similarity=0.061 Sum_probs=115.0
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+.. .+.+|+.++|.|.+ .+.|. .+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 2d3v_A 4 SKATLWAEPGS--VISRGNSVTIRCQG--TLEAQ-EYRLVKEGSPEPWDTQN-PLEPKNKARFSIPSMTEHHAGRYRCYY 77 (196)
T ss_dssp CBCEEEEESCS--EEETTCCEEEEEEC--CTTCC-EEEEEETTCSSCSEEEC-CCSSTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCCC--cccCCCeEEEEEeC--CCCCc-EEEEEECCCCCCccccc-ccCCccccEEEeccCChhHCeEEEEEE
Confidence 45777776653 48899999999987 56665 99999999876532110 011234578999999999999999999
Q ss_pred EcCCeeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCce-EEEE
Q psy2166 281 TNKWGQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV-KMVS 357 (805)
Q Consensus 281 ~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~-~~~~ 357 (805)
.|..+.. +..+.|.|.... .+|.+...+. . .+.+|+.++|.|.+. +.| +.+.|+|+|..+...... ....
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~--~~p~i~~~~~-~-~v~~G~~v~L~C~~~--~~p-~~~~W~k~g~~~~~~~~~~~~~~ 150 (196)
T 2d3v_A 78 YSPAGWSEPSDPLELVVTGFY--NKPTLSALPS-P-VVTSGENVTLQCGSR--LRF-DRFILTEEGDHKLSWTLDSQLTP 150 (196)
T ss_dssp EETTEECBCCCCEEEEEECSS--CCCEEEC-------------CEEEEEES--SCC-SEEEEEEC---CCEEEEECEECT
T ss_pred eCCCCcCCcCccEEEEecCCC--CCCeEEccCC-c-cccCCCcEEEEEEcC--CCC-CEEEEEccCCccccccccccccc
Confidence 9987643 344666665421 3566654432 2 388999999999997 677 899999999887432111 0110
Q ss_pred -eCcEEEEEEcccCcCCceEEEEEEEeCcee
Q psy2166 358 -DFGFVVMDIAYVQSHDSGEYVCRAWNKYGE 387 (805)
Q Consensus 358 -~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 387 (805)
......|.|.++..+|+|.|+|.|.|..+.
T Consensus 151 ~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 151 SGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp TSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred CCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 112357999999999999999999998754
No 190
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.79 E-value=6.3e-19 Score=171.14 Aligned_cols=173 Identities=15% Similarity=0.181 Sum_probs=123.3
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec------------CCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|+.++|.|.+. +.|.+.|.|+|+ |..+ ....|+.+...++..+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 84 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKAS--ESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAI 84 (210)
T ss_dssp CSEEEECTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CCcEEEcCCCCEEEEeeCC--CccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeE
Confidence 4578899999999999998 567788999994 3222 12358887777778899999999999999
Q ss_pred EEEEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 139 YTCRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 139 Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|.|.|.|..+.... ...|.|.... .+|.+...+.... +.+
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~P~v~~~~~~~~-~~~ 125 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELKRAD--------------------------------------AAPTVSIFPPSTE-QLA 125 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCC--------------------------------------BCCEEEEECCCHH-HHT
T ss_pred EEEEEEcCCCceeCCCEEEEEcCCC--------------------------------------cCCeEEEECCchh-hcc
Confidence 99999987654332 3456664321 2455554433332 347
Q ss_pred CceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE--EEE-EcC----eEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 218 GEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR--TVH-AFG----MVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~--~~~-~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
|+.++|.|.+.. ..|. +.|.|+|+|..+....... ... .++ .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 126 g~~v~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 126 TGGASVVCLMNN-FYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp TTEEEEEEEEEE-EBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEEe-EeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 999999999852 2444 4999999999886551111 011 111 2479999999999999999999976543
No 191
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=1.9e-18 Score=170.67 Aligned_cols=129 Identities=16% Similarity=0.198 Sum_probs=104.7
Q ss_pred EEeccCCCCCcEEEEEEEEeCC-cceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCC
Q psy2166 629 LDILYCYEENSGVYECRATNKY-GSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 707 (805)
Q Consensus 629 L~i~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 707 (805)
|.|.+++.+|+|.|+|.|.|.. |.....+.|.|..+| ..|.+...+... .+.+|
T Consensus 79 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p------------------------~~~~~~~~~~~~-~~~~g 133 (231)
T 2pet_A 79 LVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKP------------------------EATEVSPNKGTL-SVMED 133 (231)
T ss_dssp EEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCC------------------------CCCEEEECCSSC-CTTCC
T ss_pred EEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecC------------------------CCcEEecCCcce-eecCC
Confidence 9999999999999999999997 888888999998755 457787777777 88999
Q ss_pred CeE-EEEEEE-eecCCCCeEEEEEECCEEccCCC----CeEEEeeC-----c----EEEEEEcCCCCCCCEEEEEEEEc-
Q psy2166 708 EIA-HFEASL-IPVGDQTMTVEFLYNGKPIEASH----RIRTVHAF-----G----MVVLEILGTKIEDTGVYTCRATN- 771 (805)
Q Consensus 708 ~~~-~l~C~~-~~~g~p~~~v~W~~~g~~l~~~~----~~~~~~~~-----~----~~~L~i~~v~~~d~G~Y~C~a~N- 771 (805)
+.+ .|.|.+ . |.|.|.|+|+|+|..+.... ++.+.... + ...|.|.....+|+|.|+|.|.|
T Consensus 134 ~~~~~l~C~~~~--~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 134 SAQEIATCNSRN--GNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SEEEEEEEEEEE--EBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CceEEEEEEeEC--cccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 998 999999 6 89999999999999988776 55443221 1 15688986677779999999999
Q ss_pred ----CCcc-EEEEEEEEE
Q psy2166 772 ----KWGQ-AEISVNLEC 784 (805)
Q Consensus 772 ----~~G~-~~~~~~l~V 784 (805)
..|. .+.++.|+|
T Consensus 212 ~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 212 LPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CGGGCEEEEECCCEECCC
T ss_pred CcccccccccccceEEEE
Confidence 5665 556666655
No 192
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.79 E-value=1.3e-18 Score=167.16 Aligned_cols=183 Identities=11% Similarity=0.089 Sum_probs=120.0
Q ss_pred CCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 302 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 302 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
.+|.+...+.. .+.+|+.++|.|.+. +.|. .+.|+|+|..+........ .......|.|.++..+|+|.|+|.|
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~~--~~~~-~~~W~k~g~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (198)
T 1ugn_A 4 PKPTLWAEPGS--VITQGSPVTLRCQGG--QETQ-EYRLYREKKTAPWITRIPQ-ELVKKGQFPIPSITWEHTGRYRCYY 77 (198)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEECC--TTCC-CEEEEESSSCCHHHHTSCH-HHHTTTEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEeccCCC--cccCCCcEEEEEEec--CCCc-EEEEEECCccccccccccc-cCCcccEEEECCCCHHHCeEEEEEE
Confidence 56777766553 388999999999986 5555 6999999987742111000 0011226889999999999999999
Q ss_pred EeCc-ee--eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEE
Q psy2166 382 WNKY-GE--DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 458 (805)
Q Consensus 382 ~n~~-g~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (805)
.|.. |. ....+.|.|...
T Consensus 78 ~n~~~g~~~~s~~~~l~V~~~----------------------------------------------------------- 98 (198)
T 1ugn_A 78 GSDTAGRSESSDPLELVVTGA----------------------------------------------------------- 98 (198)
T ss_dssp EETTTEECCCCCCEEEEEECS-----------------------------------------------------------
T ss_pred ECCCCCcccCCccEEEEEccc-----------------------------------------------------------
Confidence 9987 63 234466666421
Q ss_pred EEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEE
Q psy2166 459 ARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKK 538 (805)
Q Consensus 459 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~ 538 (805)
..+|.+...+ .. .+.+|++++|.|.+. +. .+.|+|+|+|..
T Consensus 99 ----------------------------------~~~p~i~~~~-~~-~v~~G~~v~L~C~~~--~~-~~~v~W~k~g~~ 139 (198)
T 1ugn_A 99 ----------------------------------YIKPTLSAQP-SP-VVNSGGNVTLQCDSQ--VA-FDGFILCKEGED 139 (198)
T ss_dssp ----------------------------------SCCCEEEEES-CS-EEETTCCEEEEEECS--SC-CSEEEEEEC---
T ss_pred ----------------------------------ccCCccccCC-cc-ccCCCCcEEEEEecC--CC-CcEEEEEECCCc
Confidence 1234444332 22 388999999999998 55 679999999998
Q ss_pred ccCCCc-eEEE-eeCCEEEEEEccCCCCCCEEEEEEEEcCCcce-----EEEEEEEE
Q psy2166 539 LPHGHR-YRTF-HDFGIVILDILYCYEENSGVYECRATNKYGSD-----VTKASLKC 588 (805)
Q Consensus 539 l~~~~~-~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V 588 (805)
+..... +... ..+....|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 196 (198)
T 1ugn_A 140 EHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLV 196 (198)
T ss_dssp ---CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEE
T ss_pred cCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEe
Confidence 754321 1111 12235679999999999999999999987632 33455555
No 193
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.79 E-value=4.8e-19 Score=167.96 Aligned_cols=160 Identities=13% Similarity=0.188 Sum_probs=121.3
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCC--------------CCceEEEe---cCcEEEEEEcccccCCCe
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLEL--------------GSRFKTTA---DFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~--------------~~~~~~~~---~~~~~~L~I~~~~~~D~G 137 (805)
.+.+.+|+.++|.|.+. +.|.+.|.|+|++..+.. ..|+.... .++..+|.|.+++.+|+|
T Consensus 4 ~v~~~~G~~v~L~C~~~--~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G 81 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD 81 (184)
T ss_dssp EEEEETTSCEEECCBCS--SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCE
T ss_pred cEEEeCCCCEEEEEEEc--CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCE
Confidence 46789999999999988 688889999999863211 22444432 234557999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.+.|..+ ...|.|.... .++ . ..+.+
T Consensus 82 ~Y~C~~~~~~~----~~~l~V~~~~--------------------------------------~~~-------~-~~v~~ 111 (184)
T 2ny1_B 82 TYICEVEDQKE----EVQLLVFGLT--------------------------------------ANS-------D-THLLQ 111 (184)
T ss_dssp EEEEEETTEEE----EEEEEEEEEE--------------------------------------ESS-------C-SEEET
T ss_pred EEEEEEEcCCC----cEEEEEEEec--------------------------------------CCC-------C-ceeec
Confidence 99999987644 3445554210 000 1 13679
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEec
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 297 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~ 297 (805)
|+.++|.|.+ .+.|.+.+.|+++|..+. . ....|.|.+++.+|+|.|+|.|.|..+..+..+.|.|..
T Consensus 112 g~~~~l~C~~--~~~p~~~v~W~~~~~~~~--------~--~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 112 GQSLTLTLES--PPGSSPSVQCRSPRGKNI--------Q--GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp TCCEEEEEEC--CTTCCCEEEEECTTSCEE--------E--ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCEEEEEEc--CCCCCCEEEEEeCCCccc--------c--CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEe
Confidence 9999999988 577899999999986541 1 123799999999999999999999999999999998875
Q ss_pred c
Q psy2166 298 K 298 (805)
Q Consensus 298 ~ 298 (805)
.
T Consensus 180 ~ 180 (184)
T 2ny1_B 180 F 180 (184)
T ss_dssp C
T ss_pred c
Confidence 4
No 194
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.78 E-value=3e-18 Score=168.44 Aligned_cols=180 Identities=12% Similarity=0.068 Sum_probs=116.8
Q ss_pred CCCCceecCCCcEEEEEEEecCCC-CCceEEEEECCEe-----------cCC------CCceEEEec---CcEEEEEEcc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKND-PNLKIEWIFNGKP-----------LEL------GSRFKTTAD---FGFVTLDLTE 130 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~k~g~~-----------i~~------~~~~~~~~~---~~~~~L~I~~ 130 (805)
+...+.+.+|++|+|.|.+.+... ....|+|+|++.. +.. ..|...... .+..+|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 344578899999999999984322 2237999987532 211 123333322 3567899999
Q ss_pred cccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 131 VYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
++.+|+|.|+|.|.|..|.......+.+..... .+..
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~--------------------------------------~~~~----- 126 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVAALGS--------------------------------------DLHV----- 126 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCC--------------------------------------CCEE-----
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeecccee--------------------------------------cccc-----
Confidence 999999999999999888776655544432110 0100
Q ss_pred cccccCCCceEEEEEEEeeCCCCCeEEEEEECC-EEccCCCcEEEEEEcC-eEEEEEcCCCCcccEEEEEEEEcCCeeEE
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG-KPIEASHRIRTVHAFG-MVVLEILGTKIEDTGVYTCRATNKWGQAE 288 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g-~~l~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~ 288 (805)
...+.+|+.+.|.|.+. .+.|.|+|.|+|++ ..+...........++ ...+.+.+++.+|+|.|+|.|.|..|..+
T Consensus 127 -~~~~~~g~~v~l~c~~~-g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~ 204 (226)
T 4f80_A 127 -DVKGYKDGGIHLECRST-GWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLE 204 (226)
T ss_dssp -EEEEEETTEEEEEEEEE-EEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEE
T ss_pred -eeeeccCCceeeEEEec-cCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeE
Confidence 11366899999999984 24688999999965 4443332222222223 23344556788999999999999999999
Q ss_pred EEEEEEEe
Q psy2166 289 ISVNLECV 296 (805)
Q Consensus 289 ~~~~l~v~ 296 (805)
.++.|.|.
T Consensus 205 ~~~~v~v~ 212 (226)
T 4f80_A 205 KTASISIA 212 (226)
T ss_dssp EEEEECCC
T ss_pred EEEEEEEC
Confidence 88888774
No 195
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.78 E-value=9.5e-19 Score=170.05 Aligned_cols=176 Identities=15% Similarity=0.158 Sum_probs=127.4
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecC------------CCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLE------------LGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
.+.+.+|+.++|.|.+. +.+.|.|+|+ +..+. ...|+.+...++..+|.|.+++.+|+|.|+
T Consensus 9 ~~~v~~G~~v~L~C~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 84 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT----SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYY 84 (211)
T ss_dssp EEEECTTCEEEEEEECC----CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred eEEEcCCCCEEEEEEEC----CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEE
Confidence 67899999999999986 6779999994 32221 345788777777889999999999999999
Q ss_pred EEEEeCCe--eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCC
Q psy2166 141 CRAWNLAG--ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEG 218 (805)
Q Consensus 141 C~a~n~~g--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 218 (805)
|.+.|..+ .......|.|...+ ..+|.+...+.... +.+|
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~v~~~~~~~~-~~~g 126 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVLGQP-------------------------------------KAAPSVTLFPPSSE-ELQA 126 (211)
T ss_dssp EEEEETTTEEEECCCEEEEECCSC-------------------------------------CBCCEEEEECCCHH-HHHT
T ss_pred EEEecCCCceeECCCceEEEeCCC-------------------------------------CcCCeeEecCCchh-hhcC
Confidence 99999876 33445566665211 13566665554443 3479
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE--EEEcC----eEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEE
Q psy2166 219 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT--VHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 292 (805)
Q Consensus 219 ~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~--~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 292 (805)
+.++|.|.+.....|.+.+.|+|+|..+........ ...++ ...|.|.++..+|+|.|+|.|.|..+..+.++.
T Consensus 127 ~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 127 NKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp TCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 999999998532235689999999998865311110 11111 257999999999999999999999876665543
No 196
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.78 E-value=7e-19 Score=171.16 Aligned_cols=183 Identities=11% Similarity=0.116 Sum_probs=126.3
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeE--EEEEcCCCCcccEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMV--VLEILGTKIEDTGVYTC 278 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C 278 (805)
.+|.|...+.. .+.+|+.++|.|.+ .+ +.+.+.|+|+|..+...... ........ .|.|.+++.+|+|.|+|
T Consensus 8 ~~P~i~~~p~~--~v~~G~~vtL~C~~--~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C 81 (218)
T 1uct_A 8 PMPFISAKSSP--VIPLDGSVKIQCQA--IR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQC 81 (218)
T ss_dssp CCCCEEESSCS--EEETTCCEEEEECC--CT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEE
T ss_pred CCCEEEecCCC--ccCCCCCEEEEEEc--CC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEE
Confidence 56778777663 48899999999987 44 57899999998765432211 11111223 79999999999999999
Q ss_pred EEEcCCeeEE--EEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE
Q psy2166 279 RATNKWGQAE--ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 356 (805)
Q Consensus 279 ~~~n~~g~~~--~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~ 356 (805)
.+.|..+... ..+.|.|.... .+|.+...+. . .+.+|+.++|.|... +.+.+.+.|+|+|..+... ..
T Consensus 82 ~a~n~~~~~~~s~~~~l~V~~~~--~~P~i~~~p~-~-~v~~G~~v~L~C~~~--~~~~~~~~W~k~g~~~~~~--~~-- 151 (218)
T 1uct_A 82 QYRIGHYRFRYSDTLELVVTGLY--GKPFLSADRG-L-VLMPGENISLTCSSA--HIPFDRFSLAKEGELSLPQ--HQ-- 151 (218)
T ss_dssp EEEETTTEEEECCCEEEEEECSS--CCCEEEESSC-S-EECTTCCCEEEEECS--SSCCSEEEEEETTCSSCCS--EE--
T ss_pred EEEcCCCceeecCCEEEEEcCcc--cCCEEEeCCC-C-ccCCCCCEEEEEeCC--CCCCCEEEEEECCCccccc--cc--
Confidence 9999765433 34556655321 3566655442 2 378999999999664 6777899999999877542 11
Q ss_pred EeCcEEEEEEcccCcCCceEEEEEEEeCce-----eeEEEEEEEEEec
Q psy2166 357 SDFGFVVMDIAYVQSHDSGEYVCRAWNKYG-----EDFTRATIKCFGK 399 (805)
Q Consensus 357 ~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~ 399 (805)
.......|.|.++..+|+|.|+|.|.|... .....+.|.|.+.
T Consensus 152 ~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 152 SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 222334799999999999999999998642 2223466777643
No 197
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.78 E-value=2.3e-18 Score=167.58 Aligned_cols=167 Identities=15% Similarity=0.114 Sum_probs=121.2
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|++++|.|.+. +.|.+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3nl4_L 8 PASVSEPVGGTVTIKCQAS--QSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAAT 85 (213)
T ss_dssp CSEEEEETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCeEEEcCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEE
Confidence 3368899999999999998 5688899999942 111 11468888877788899999999999999
Q ss_pred EEEEEEeCCe---eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 139 YTCRAWNLAG---ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 139 Y~C~a~n~~g---~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
|+|.|.|..+ .......|.|.... .+|.+....... .+
T Consensus 86 Y~C~~~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~v~~~~~~~-~~ 126 (213)
T 3nl4_L 86 YYCQSTYENPTYVSFGGGTEVGVKGDP--------------------------------------VAPTVLIFPPSA-DL 126 (213)
T ss_dssp EEEEECCSSTTTCEECCCEEEEEECCC--------------------------------------BCCEEEEECCCH-HH
T ss_pred EEEecCCCCceeEEeCCCeEEEEeCCC--------------------------------------cCCeEEEeCCch-hh
Confidence 9999998765 33334556664311 345555443333 25
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC-cEEEE--EEcC----eEEEEEcCCCCcccEEEEEEEE
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH-RIRTV--HAFG----MVVLEILGTKIEDTGVYTCRAT 281 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~-~~~~~--~~~~----~~~L~i~~~~~~d~G~Y~C~~~ 281 (805)
.+|+.++|.|.+.. +.|.+.+.|+|+|..+.... ..... ..++ .+.|.|.++..+|+|.|+|.|.
T Consensus 127 ~~g~~v~l~C~~~g-~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 127 VATGTVTIVCVANK-YFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp HTTSEEEEEEEEEE-EBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCCcEeEEEEEec-ccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 57999999999842 27789999999999886432 00000 0011 2579999999999999999999
No 198
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=170.65 Aligned_cols=180 Identities=11% Similarity=0.062 Sum_probs=122.0
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCc---eEEEEECCEecCCC------------------CceEEEe---cCcEEEEE
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNL---KIEWIFNGKPLELG------------------SRFKTTA---DFGFVTLD 127 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~---~v~W~k~g~~i~~~------------------~~~~~~~---~~~~~~L~ 127 (805)
.++.+.|.+|++++|.|.+.+ .|.+ .|+|+|++..+... .|+.+.. .....+|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~--~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~ 82 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRG--DSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVL 82 (218)
T ss_dssp CCSEEEEETTSCEEECCEECC--CTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEE
T ss_pred CCCeEEEEcCCCEEEEEEEEc--CCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEE
Confidence 445688999999999999984 4443 58999987554321 1222211 12345799
Q ss_pred EcccccCCCeEEEEEEEeCCeeEEE-EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 128 LTEVYDRDQGIYTCRAWNLAGETFT-STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 128 I~~~~~~D~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
|.+++.+|+|.|.|.+.+..+.... ...+.+...+ +.+.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~ 122 (218)
T 4frw_A 83 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPP----------------------------------------LPSL 122 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC----------------------------------------CCEE
T ss_pred EeeccHHHCCceeEEEEeccCceeeeEEEEEEeeec----------------------------------------ccee
Confidence 9999999999999999886544333 3333333211 1111
Q ss_pred cccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-EcCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
.. .....+.+|+.+.|.|.+ .+.|.|.|.|++++..+.......... ....+.|.|.++..+|+|.|+|.|.|..|
T Consensus 123 ~~-~~~~~~~~~~~~~~~c~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g 199 (218)
T 4frw_A 123 NP-GPALEEGQGLTLAASCTA--EGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGL 199 (218)
T ss_dssp EE-CSCEETTCCSEEEEEEEE--EEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred ee-eeeeeeeeccccceeeec--cCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCC
Confidence 11 122246789999999988 688889999999998775443221110 11245799999999999999999999998
Q ss_pred eEEEEEEEEEe
Q psy2166 286 QAEISVNLECV 296 (805)
Q Consensus 286 ~~~~~~~l~v~ 296 (805)
..+..+.+.|.
T Consensus 200 ~~~~~~t~~v~ 210 (218)
T 4frw_A 200 LQDQRITHILH 210 (218)
T ss_dssp SSCEEEEEECC
T ss_pred CeEEEEEEEEE
Confidence 87766666654
No 199
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.78 E-value=2.9e-18 Score=166.80 Aligned_cols=178 Identities=15% Similarity=0.219 Sum_probs=124.5
Q ss_pred CCCceecCCCcEEEEEEEecCCCC---CceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCC
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP---NLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRD 135 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p---~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D 135 (805)
+..+.+.+|+.++|.|.+. +.| .+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 84 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSS--TGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTED 84 (212)
T ss_dssp CSEEEECTTCCEEEEEEES--SSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred CCeEeecCCCCEEEEEEec--ccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccC
Confidence 4467899999999999998 444 4789999963 222 22467877777778899999999999
Q ss_pred CeEEEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 136 QGIYTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 136 ~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
+|.|.|.+.|..+... ....|.|.... ..+|.+........
T Consensus 85 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~v~~~~~~~~- 126 (212)
T 1q0x_L 85 EAIYFCALWSNNKLVFGGGTKLTVLGQP-------------------------------------KSSPTVTLFPPSSE- 126 (212)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEECCSC-------------------------------------CBCCEEEEECCCHH-
T ss_pred CEEEEEEEecCchhhcCCCeEEEEecCC-------------------------------------CCCCeeEEeCCCHH-
Confidence 9999999999765432 23445553211 13466655443332
Q ss_pred cCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE--EEEEcC----eEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 215 LSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR--TVHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~--~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
+.+|+.++|.|.+.. ..|. ..|.|+|+|..+....... ....++ .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 127 ~~~g~~v~L~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (212)
T 1q0x_L 127 ELSTAKATLVCTITD-FYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSS 205 (212)
T ss_dssp HHTTTEEEEEEEEEE-EBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEE
T ss_pred HccCCcEEEEEEEEE-EeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcce
Confidence 447899999999853 2343 4999999999987542211 111111 2478999999999999999999987665
Q ss_pred EEEE
Q psy2166 288 EISV 291 (805)
Q Consensus 288 ~~~~ 291 (805)
..++
T Consensus 206 ~~~v 209 (212)
T 1q0x_L 206 NKTL 209 (212)
T ss_dssp EEEE
T ss_pred eeee
Confidence 4443
No 200
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=165.41 Aligned_cols=160 Identities=14% Similarity=0.133 Sum_probs=118.8
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+.. .+.+|++++|.|.+ .+ +.+.+.|+|+|... ......|.|.+++.+|+|.|+|.+
T Consensus 7 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~-~~~~~~W~k~g~~~----------~~~~~~L~i~~v~~~D~G~Y~C~a 71 (184)
T 2gi7_A 7 PKPSLQALPSS--LVPLEKPVTLRCQG--PP-GVDLYRLEKLSSSR----------YQDQAVLFIPAMKRSLAGRYRCSY 71 (184)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--ST-TCSEEEEEETTTCC----------EESSSEEEESSCCGGGCEEEEEEE
T ss_pred CCCeEEeCCCc--cccCCCcEEEEEeC--CC-CCCEEEEEECCccc----------cCcccEEEECcCChhhCceEEEEE
Confidence 56777776654 48899999999987 45 67899999998751 112347999999999999999999
Q ss_pred EcCCeeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe
Q psy2166 281 TNKWGQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 281 ~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
.|..+.. +..+.|.|.... .+|.+...+ .. .+.+|+.++|.|.+. +. .+.+.|+|+|..+.......
T Consensus 72 ~n~~g~~~~s~~~~l~V~~~~--~~p~i~~~p-~~-~v~~G~~v~l~C~~~--~~-~~~~~w~k~g~~~~~~~~~~---- 140 (184)
T 2gi7_A 72 QNGSLWSLPSDQLELVATGVF--AKPSLSAQP-GP-AVSSGGDVTLQCQTR--YG-FDQFALYKEGDPAPYKNPER---- 140 (184)
T ss_dssp EETTEEBCCCCCEEEEEESSS--CCCEEEEEC-CC-SSCCTTCEEEEEECS--SC-CCEEEEEECCCCTTSCCCCE----
T ss_pred EcCCCccCCCCCEEEEecCcC--CCCEEEeCC-Cc-eecCCCcEEEEEEcC--CC-CcEEEEEECCCcCcceecCC----
Confidence 9987643 344566664321 456666554 32 378999999999975 44 46999999998876532211
Q ss_pred CcEEEEEEcccCcCCceEEEEEEEeCce
Q psy2166 359 FGFVVMDIAYVQSHDSGEYVCRAWNKYG 386 (805)
Q Consensus 359 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~g 386 (805)
.....|.|.++..+|+|.|+|.|.|..+
T Consensus 141 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 141 WYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred CceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 1223588999999999999999999764
No 201
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.78 E-value=1.4e-18 Score=171.66 Aligned_cols=168 Identities=14% Similarity=0.189 Sum_probs=121.6
Q ss_pred cCCCCceecCCCcEEEEEEEecCCCCC-ceEEEEECCEecC---------C----CCceE----------EEecCcEEEE
Q psy2166 71 PLKPEFKLGEAQPLHLEAQVEPKNDPN-LKIEWIFNGKPLE---------L----GSRFK----------TTADFGFVTL 126 (805)
Q Consensus 71 ~~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~k~g~~i~---------~----~~~~~----------~~~~~~~~~L 126 (805)
..+..+.+.+|+.++|.|.+. +.+. +.|.|+|++.... . ..++. +..++ .|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~L 79 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPT--GTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG---RL 79 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCB--SCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC---CE
T ss_pred cCCCcEEEEcCCCEEEecccC--CCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc---eE
Confidence 345578899999999999998 5664 8999998654321 1 11222 33333 49
Q ss_pred EEcccccCCCeEEEEEEEeCC-eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCce
Q psy2166 127 DLTEVYDRDQGIYTCRAWNLA-GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQF 205 (805)
Q Consensus 127 ~I~~~~~~D~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 205 (805)
.|.+++.+|+|.|+|.+.+.. +.......|.|..++ ..|.+
T Consensus 80 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p--------------------------------------~~~~~ 121 (231)
T 2pet_A 80 VLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKP--------------------------------------EATEV 121 (231)
T ss_dssp EESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCC--------------------------------------CCCEE
T ss_pred EEcccCcccCceEEEEEEecCCCceEEEEEEEEEecC--------------------------------------CCcEE
Confidence 999999999999999999986 777778888887654 22444
Q ss_pred ecccccccccCCCceE-EEEEEEeeCCCCCeEEEEEECCEEccCCC----cEEEEEEc-----C----eEEEEEcCCCCc
Q psy2166 206 TSEFQHLSNLSEGEIA-HFEASLIPVGDQTMTVEFLYNGKPIEASH----RIRTVHAF-----G----MVVLEILGTKIE 271 (805)
Q Consensus 206 ~~~~~~~~~v~~g~~~-~l~C~~~~~~~p~~~i~W~k~g~~l~~~~----~~~~~~~~-----~----~~~L~i~~~~~~ 271 (805)
...+... .+.+|+.+ +|.|.+. .+.|.+.+.|+|+|..+.... ++.+.... + ...|.|.....+
T Consensus 122 ~~~~~~~-~~~~g~~~~~l~C~~~-~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~d 199 (231)
T 2pet_A 122 SPNKGTL-SVMEDSAQEIATCNSR-NGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDD 199 (231)
T ss_dssp EECCSSC-CTTCCSEEEEEEEEEE-EEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred ecCCcce-eecCCCceEEEEEEeE-CcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhh
Confidence 4444333 36788887 9999874 367889999999999987665 44433211 1 256888866667
Q ss_pred ccEEEEEEEEcC
Q psy2166 272 DTGVYTCRATNK 283 (805)
Q Consensus 272 d~G~Y~C~~~n~ 283 (805)
|+|.|+|.|.|.
T Consensus 200 d~g~Y~C~a~n~ 211 (231)
T 2pet_A 200 RDASFHCAAHYS 211 (231)
T ss_dssp GGCEEEEEEEEE
T ss_pred CCceEEEEEEcC
Confidence 799999999994
No 202
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=2.8e-18 Score=171.32 Aligned_cols=189 Identities=20% Similarity=0.249 Sum_probs=128.2
Q ss_pred cccCCCeEEEEEEEeeCCCC--CcEEEEEECC--EEc-----------------cCCCceEEEee--CCEEEEEEccCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDP--DLVVEWFYNG--KKL-----------------PHGHRYRTFHD--FGIVILDILYCYE 563 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v~~ 563 (805)
.+.+|++++|.|.+. +.| .+.+.|+|++ ..+ ....|+.+..+ .+...|.|.+++.
T Consensus 13 ~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 13 VVQPGKSLRLSCAAS--GFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp EECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEecCCcEEEEEEec--cccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 489999999999999 555 6789999842 111 12357766553 4567899999999
Q ss_pred CCCEEEEEEEEcCCcceE--EEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEE
Q psy2166 564 ENSGVYECRATNKYGSDV--TKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641 (805)
Q Consensus 564 ~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 641 (805)
+|+|.|+|.|.|..+... ..+.|.|...+.. .+
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~--------------------------------------------~~- 125 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGG--------------------------------------------SG- 125 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC-------------------------------------------------
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEeccccc--------------------------------------------cc-
Confidence 999999999998732211 1223333322110 00
Q ss_pred EEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC
Q psy2166 642 YECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD 721 (805)
Q Consensus 642 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~ 721 (805)
. + .+.-. ..+|.+...+... .+.+|++++|.|.+. |.
T Consensus 126 -------~-~------~~~~~--------------------------~~~~~~~~~~~~~-~v~~G~~v~L~C~~~--~~ 162 (247)
T 2ghw_B 126 -------G-G------GSGGG--------------------------GSETTLTQSPATL-SLSPGERATLSCRAS--QS 162 (247)
T ss_dssp ------------------------------------------------CCCCEEEECSEE-EECTTSCEEEEEEES--SC
T ss_pred -------c-c------ccCCC--------------------------CcceEEEccCCEE-EecCCCcEEEEEEeC--CC
Confidence 0 0 00000 0355666666666 899999999999998 88
Q ss_pred CCeEEEEEE--CCEEc------------cCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccE-EEEEEEEEE
Q psy2166 722 QTMTVEFLY--NGKPI------------EASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA-EISVNLECV 785 (805)
Q Consensus 722 p~~~v~W~~--~g~~l------------~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~ 785 (805)
|.+.|.|+| +|..+ ....++.+..+....+|+|.+++.+|+|.|+|.|.|..+.. ...++|.|.
T Consensus 163 ~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 163 VRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp CTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 989999999 66543 12456666556667789999999999999999999965433 234466665
No 203
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=9.2e-19 Score=175.75 Aligned_cols=192 Identities=16% Similarity=0.159 Sum_probs=126.1
Q ss_pred cccCCCeEEEEEEEeeCCCCCcEEEEEEC--CEE---cc-------------CCCceEEEee--CCEEEEEEccCCCCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDPDLVVEWFYN--GKK---LP-------------HGHRYRTFHD--FGIVILDILYCYEENS 566 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p~~~v~W~~~--g~~---l~-------------~~~~~~~~~~--~~~~~L~i~~v~~~d~ 566 (805)
.+.+|++++|.|.+.+.+.+.+.+.|+|+ |.. +. ...|+.+..+ ++...|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 90 (257)
T 1f3r_B 11 LVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDDT 90 (257)
T ss_dssp EECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTCC
T ss_pred cccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcccC
Confidence 38999999999999942223789999985 221 10 1356766553 4567899999999999
Q ss_pred EEEEEEEEcCCcce------E---EEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCC
Q psy2166 567 GVYECRATNKYGSD------V---TKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEE 637 (805)
Q Consensus 567 G~Y~C~a~n~~g~~------~---~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~ 637 (805)
|.|+|.|.|..|.. . ..+.|.|...+.. .|
T Consensus 91 G~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~-----~~------------------------------------ 129 (257)
T 1f3r_B 91 GTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGG-----SG------------------------------------ 129 (257)
T ss_dssp EEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCS-----SC------------------------------------
T ss_pred EEEEEEEcccccCccccccccccCCceEEEEEeCCcc-----cc------------------------------------
Confidence 99999999976520 0 1112222221100 00
Q ss_pred CcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEe
Q psy2166 638 NSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLI 717 (805)
Q Consensus 638 d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~ 717 (805)
.+ ..+. ...+|.+...+... .+.+|++++|.|.+.
T Consensus 130 -~~--------~~~~-----------------------------------~~~~~~~~~~p~~~-~v~~G~~v~L~C~~~ 164 (257)
T 1f3r_B 130 -GG--------GSGG-----------------------------------GGSDIKLTQSPSLL-SASVGDRVTLSCKGS 164 (257)
T ss_dssp -CS--------SSCC-----------------------------------CCCEECSCEETSEE-CCCTTCCEEEEEECS
T ss_pred -cc--------ccCC-----------------------------------CccceEEEccCCEE-EEcCCCCEEEEEEEC
Confidence 00 0000 00123333344555 789999999999998
Q ss_pred ecCCCCeEEEEEE--CCEEcc------------CCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEE
Q psy2166 718 PVGDQTMTVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 783 (805)
Q Consensus 718 ~~g~p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 783 (805)
+.|.+.|.|+| +|..+. ...++.+..+++...|+|.+++.+|+|.|+|.|.|........+.|+
T Consensus 165 --~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~ 242 (257)
T 1f3r_B 165 --QNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLE 242 (257)
T ss_dssp --SCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEEC
T ss_pred --CcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEE
Confidence 88889999999 665331 13567665566677999999999999999999999752222344666
Q ss_pred EEE
Q psy2166 784 CVV 786 (805)
Q Consensus 784 V~~ 786 (805)
|..
T Consensus 243 V~~ 245 (257)
T 1f3r_B 243 LKA 245 (257)
T ss_dssp CSS
T ss_pred EeC
Confidence 643
No 204
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.78 E-value=1e-18 Score=175.42 Aligned_cols=258 Identities=13% Similarity=0.076 Sum_probs=101.5
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEE--CCEEc-cCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLY--NGKPI-EASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 290 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k--~g~~l-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 290 (805)
.+.+|+++.|+|.+. ...+..+.|.- .+..+ .... ....|.|.+++.+ |.|+|.+.......+..
T Consensus 10 ~V~~G~sv~l~Cs~~--c~~p~~~~~~t~l~~~~~~~~g~--------~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~ 77 (291)
T 1mq8_A 10 ILPRGGSVLVTCSTS--CDQPKLLGIETPLPKKELLLPGN--------NRKVYELSNVQED--SQPMCYSNCPDGQSTAK 77 (291)
T ss_dssp EECTTCEEEEEEEEC--CSSCSEEEEECSSCCCCCCCSCS--------SEEEEEEESCCSC--CCCEEEEECSSCEEEEE
T ss_pred EEcCCCeEEEEEeCC--CCCCccceEEecCCCcccccCCC--------ceEEEEEEecccC--CeEEEEEEcCCccEEEE
Confidence 488999999999983 22223488863 12111 1111 1235788888754 46999998655556777
Q ss_pred EEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc--EEEEEECCEEccCCCceEEEEeCcEEEEEEcc
Q psy2166 291 VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL--KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAY 368 (805)
Q Consensus 291 ~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~ 368 (805)
+.+.|...+ ..+.+. +.+. .+.+|+.++|.|.+.+ +.|.. .|+|+|+++.+..... .......+|.+..
T Consensus 78 v~l~V~~~P--~~v~I~--~~~~-~~~~G~~~~LtC~v~g-~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~ 148 (291)
T 1mq8_A 78 TFLTVYWTP--ERVELA--PLPS-WQPVGKNLTLRCQVEG-GAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLV 148 (291)
T ss_dssp CEEEECBCC--SCCCBC--CCCS-BCCSSCCCEEEEEECC-CBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCC
T ss_pred EEEEEecCC--CCCEEe--cCCc-cccCCCCEEEEEEecC-ccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeee
Confidence 788887533 222222 2222 2788999999999985 55654 6999999988753221 1112334677777
Q ss_pred cCcCCceEEEEEEEeCcee--------eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCcee
Q psy2166 369 VQSHDSGEYVCRAWNKYGE--------DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFI 440 (805)
Q Consensus 369 v~~~d~G~Y~C~a~n~~g~--------~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (805)
...+|.+.|+|+|.|..+. ......|.|
T Consensus 149 ~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V-------------------------------------------- 184 (291)
T 1mq8_A 149 RRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQT-------------------------------------------- 184 (291)
T ss_dssp SSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------------------------
T ss_pred eeccCCceEEEEEEecCCccCCccccccccceEEEE--------------------------------------------
Confidence 7777778999999987542 111223333
Q ss_pred eeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEE
Q psy2166 441 TQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL 520 (805)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v 520 (805)
.++|.....+.....+.+|+.++|+|.+
T Consensus 185 ----------------------------------------------------~~~P~~~~~~~~p~~l~eG~~v~l~C~~ 212 (291)
T 1mq8_A 185 ----------------------------------------------------FVLPATPPQLVSPRVLEVDTQGTVVCSL 212 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------EecCCCCceecCCcCccCCCeEEEEEEc
Confidence 2332211111001137899999999999
Q ss_pred eeCCCCC--cEEEEEECCEEccCCCceEEEeeCCEEEEEEc-cCCCCC--CEEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 521 TPVTDPD--LVVEWFYNGKKLPHGHRYRTFHDFGIVILDIL-YCYEEN--SGVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 521 ~~~g~p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~-~v~~~d--~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.++ +|. +.++|+++|+.+.... ..+++....... .+..+| .+.|+|.|.|.........+|.|...+.
T Consensus 213 ~g~-~P~~~~~v~w~~~g~~l~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~ 285 (291)
T 1mq8_A 213 DGL-FPVSEAQVHLALGDQRLNPTV----TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA 285 (291)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCC-CCCcccEEEEEECCEecCcee----eecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCC
Confidence 942 343 4799999999987532 112222112111 112333 6678899988555566677788876443
No 205
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=2.6e-18 Score=169.61 Aligned_cols=183 Identities=14% Similarity=0.129 Sum_probs=126.4
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
...+|.+...+.. .|.+|++|+|.|.+. .+...+.|+|+|..+..... ..........|.|.+++.+|+|.|+|
T Consensus 4 ~~~kP~i~~~P~~--~v~~G~~VtL~C~~~---~~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C 77 (242)
T 1p6f_A 4 TLPKPFIWAEPHF--MVPKEKQVTICCQGN---YGAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSC 77 (242)
T ss_dssp CCCCCEEEEESCS--EEETTCCEEEEEECC---TTCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCEEEeeCCC--ccCCCCcEEEEEeeC---CCCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEE
Confidence 3567888776653 899999999999987 34568999999987642100 00111234589999999999999999
Q ss_pred EEEeCCeeE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 142 RAWNLAGET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 142 ~a~n~~g~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
.+.+..+.. .....|.|.... .+|.+...+.. .+.+|+
T Consensus 78 ~~~~~~~~s~~S~~~~L~V~~~~--------------------------------------~~P~i~~~p~~--~v~~G~ 117 (242)
T 1p6f_A 78 IYRVGELWSEPSNLLDLVVTEMY--------------------------------------DTPTLSVHPGP--EVISGE 117 (242)
T ss_dssp EEEETTEECCCCCCEEEEEECCS--------------------------------------CCCEEEEESCS--EEETTC
T ss_pred EEecCCccccCCcceEEEeeccc--------------------------------------CCCceEccCCC--ccCCCC
Confidence 998865432 234555554311 23555544422 378999
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC-e--eEEEEEEEEEe
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW-G--QAEISVNLECV 296 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~-g--~~~~~~~l~v~ 296 (805)
.++|.|.+ .+. .+.+.|+|+|..+.. ..........|.|.+++.+|+|.|+|.+.|.. . ..+..+.|.|.
T Consensus 118 ~vtL~C~~--~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 118 KVTFYCRL--DTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp EEEEEEEC--TTS-CSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred cEEEEEec--CCC-CCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 99999987 443 469999999976643 11233446789999999999999999999864 1 22445666665
Q ss_pred c
Q psy2166 297 D 297 (805)
Q Consensus 297 ~ 297 (805)
.
T Consensus 191 ~ 191 (242)
T 1p6f_A 191 G 191 (242)
T ss_dssp C
T ss_pred c
Confidence 4
No 206
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=8.9e-18 Score=167.64 Aligned_cols=190 Identities=17% Similarity=0.208 Sum_probs=125.9
Q ss_pred CceecCCCcEEEEEEEecCCCC--CceEEEEECC--Eec-----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KPL-----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~i-----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
.+.+.+|+.++|.|.+. +.| .+.|.|+|+. ..+ ....|+.+..+ ++..+|+|.++
T Consensus 11 ~~~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 11 GGVVQPGKSLRLSCAAS--GFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp CEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CEEEecCCcEEEEEEec--cccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 57899999999999998 454 6789999942 111 12357877664 45778999999
Q ss_pred ccCCCeEEEEEEEeCCeeE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 132 YDRDQGIYTCRAWNLAGET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
+.+|+|.|+|.|.|..+.. .....|.|...+... +. ........+|.+...+
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~-----~~---------------------~~~~~~~~~~~~~~~~ 142 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGS-----GG---------------------GGSGGGGSETTLTQSP 142 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC--------------------------------------CCCCEEEEC
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccc-----cc---------------------cccCCCCcceEEEccC
Confidence 9999999999999973322 233466665432100 00 0000001334455444
Q ss_pred ccccccCCCceEEEEEEEeeCCCCCeEEEEEE--CCEEcc------------CCCcEEEEEEcCeEEEEEcCCCCcccEE
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGV 275 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 275 (805)
... .+.+|++++|.|.+ .+.|.+.+.|+| +|..+. ...++.........+|.|.+++.+|+|.
T Consensus 143 ~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 219 (247)
T 2ghw_B 143 ATL-SLSPGERATLSCRA--SQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAV 219 (247)
T ss_dssp SEE-EECTTSCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEE
T ss_pred CEE-EecCCCcEEEEEEe--CCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEE
Confidence 443 47899999999998 677778999999 565431 1345544444456789999999999999
Q ss_pred EEEEEEcCCeeE-EEEEEEEE
Q psy2166 276 YTCRATNKWGQA-EISVNLEC 295 (805)
Q Consensus 276 Y~C~~~n~~g~~-~~~~~l~v 295 (805)
|+|.|.|..... .....|.|
T Consensus 220 Y~C~a~~~~~~~~g~~t~l~V 240 (247)
T 2ghw_B 220 YYCQQRSNWPPTFGQGTKVEV 240 (247)
T ss_dssp EEEEECSSSSCEECCCEEEEE
T ss_pred EEEEEccCCCceEcCCEEEEE
Confidence 999999854332 23334444
No 207
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.77 E-value=3.8e-18 Score=164.15 Aligned_cols=173 Identities=10% Similarity=0.016 Sum_probs=117.3
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCce-EEEecCcEEEEEEcccccCCCeEEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRF-KTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
.+.+|.+...+. ..+.+|++++|.|.+. .+.+.|.|+|+|..+....+. ..........|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~i~~~p~--~~v~~G~~v~L~C~~~---~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~ 79 (201)
T 1nkr_A 5 VHRKPSLLAHPG--PLVKSEETVILQCWSD---VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYR 79 (201)
T ss_dssp --CCCEEEEESC--SEEETTCCEEEEEEES---SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEE
T ss_pred cCCCCeEEEEcC--CccCCCCcEEEEEecc---CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEE
Confidence 356677765553 6789999999999987 467799999999765432111 1111123458999999999999999
Q ss_pred EEEEeCCe-----eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 141 CRAWNLAG-----ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 141 C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
|.+.+... .......|.|.... .+|.+...+.. .+
T Consensus 80 C~a~~~~~~~~~~~~s~~~~l~V~~~~--------------------------------------~~p~i~~~p~~--~v 119 (201)
T 1nkr_A 80 CYGSVTHSPYQVSAPSDPLDIVIIGLY--------------------------------------EKPSLSAQPGP--TV 119 (201)
T ss_dssp EEEEBTTBTTCCCCCCCCEEEEEECSS--------------------------------------CCCEEEEESCS--EE
T ss_pred EeEecCCCCccccCCCCCEEEEeeccC--------------------------------------CCCceecCCCC--cc
Confidence 99987531 22334556665321 34556554442 47
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEc-CeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF-GMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
.+|+.++|.|.+ .+ +.+.+.|+|+|..+............ ....|.|.+++ |+|.|+|.|.+..
T Consensus 120 ~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 120 LAGENVTLSCSS--RS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp CTTCEEEEEEEE--SS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred CCCCeEEEEEeC--CC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 899999999997 44 45789999999876533211111111 14689999998 9999999998753
No 208
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=2.5e-18 Score=163.38 Aligned_cols=168 Identities=12% Similarity=0.111 Sum_probs=119.7
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+.. .+.+|++++|.|.+ .+ +.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 3 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 76 (188)
T 1oll_A 3 PKPFIWAEPHF--MVPKEKQVTICCQG--NY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIY 76 (188)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeecCC--cCCCCCCEEEEEec--CC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEe
Confidence 35777776665 48899999999987 33 34789999999876421000 001123468999999999999999999
Q ss_pred EcCCeeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe
Q psy2166 281 TNKWGQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 281 ~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
.|..+.. +..+.|.|.... .+|.+...+. . .+.+|+.++|.|.+. + +.+.+.|+|+|..+.. .....
T Consensus 77 ~~~~~~~~~s~~~~l~V~~~~--~~p~i~~~p~-~-~v~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~----~~~~~ 145 (188)
T 1oll_A 77 RVGELWSEPSNLLDLVVTEMY--DTPTLSVHPG-P-EVISGEKVTFYCRLD--T-ATSMFLLLKEGRSSHV----QRGYG 145 (188)
T ss_dssp EETTEECCCCCCEEEEEESCS--CCCEEEEESC-S-EEETTCEEEEEEECS--S-SCSEEEEEEESSSCEE----EEEEC
T ss_pred cCCCCCCCCCCceEEEecccC--CCCeEEECCC-C-ccccCCEEEEEEEcC--C-CCCEEEEEECCccccc----cccCC
Confidence 9875533 344566665321 3566654442 2 378999999999984 3 4578999999976643 11223
Q ss_pred CcEEEEEEcccCcCCceEEEEEEEeCc
Q psy2166 359 FGFVVMDIAYVQSHDSGEYVCRAWNKY 385 (805)
Q Consensus 359 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 385 (805)
.....|.|.++..+|+|.|+|.|.|..
T Consensus 146 ~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 146 KVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp SSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 345579999999999999999999864
No 209
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.77 E-value=5.6e-18 Score=169.70 Aligned_cols=135 Identities=20% Similarity=0.200 Sum_probs=101.5
Q ss_pred CCEEEEEeccCCCCCcEEEEEEEEeCCcc---e--EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecC
Q psy2166 624 FGIVILDILYCYEENSGVYECRATNKYGS---D--VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEF 698 (805)
Q Consensus 624 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~---~--~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~ 698 (805)
++...|.|.+++.+|+|.|+|.|.|..|. . ...+.|.|. .+|.+...+
T Consensus 76 ~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~---------------------------~~~~v~~~p 128 (256)
T 1nqb_A 76 SSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS---------------------------SDIELTQTP 128 (256)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC---------------------------CCCCEEEEC
T ss_pred CCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec---------------------------ccccEEecC
Confidence 34567999999999999999999998763 1 123566665 346666667
Q ss_pred CcccccCCCCeEEEEEEEeecCCCCe-----EEEEEE--CCEEcc------------CCCCeEEEeeCcEEEEEEcCCCC
Q psy2166 699 QHLSNLSEGEIAHFEASLIPVGDQTM-----TVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILGTKI 759 (805)
Q Consensus 699 ~~~~~v~~G~~~~l~C~~~~~g~p~~-----~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~ 759 (805)
... .+.+|++++|.|.+. |.|.+ .|.|+| +|..+. ...++.+........|+|.+++.
T Consensus 129 ~~~-~v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 205 (256)
T 1nqb_A 129 LSL-PVSLGDQASISCRSS--QSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA 205 (256)
T ss_dssp SEE-EECTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cEE-EEecCCcEEEEeEec--CcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCCh
Confidence 776 899999999999998 88775 999999 665431 13567666666778999999999
Q ss_pred CCCEEEEEEEEcCCcc-EEEEEEEEEEEeC
Q psy2166 760 EDTGVYTCRATNKWGQ-AEISVNLECVVWS 788 (805)
Q Consensus 760 ~d~G~Y~C~a~N~~G~-~~~~~~l~V~~~~ 788 (805)
+|+|.|+|.|.|..+. -...+.|.|...+
T Consensus 206 ~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 235 (256)
T 1nqb_A 206 EDLGVYYCFQGSHVPYTFGGGTKLEIKRAA 235 (256)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECC--
T ss_pred HHCEEEEEEEccCCceEECCCEEEEEECCC
Confidence 9999999999996543 2334567775433
No 210
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.77 E-value=1.3e-17 Score=169.38 Aligned_cols=205 Identities=13% Similarity=0.084 Sum_probs=129.8
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECC-----EEc---------cCCCceEEEeeCCEEEEEEcc
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNG-----KKL---------PHGHRYRTFHDFGIVILDILY 560 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g-----~~l---------~~~~~~~~~~~~~~~~L~i~~ 560 (805)
.+.+...+... .+.+|++++|.|.+. +.|.+.+.|+|++ +.+ ....|+.+..+++...|.|.+
T Consensus 12 ~~~v~~~p~~~-~v~~G~~v~L~C~~~--~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 88 (276)
T 3auv_A 12 DIQMTQSPSSL-SASVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISS 88 (276)
T ss_dssp CCCEEEECSEE-ECCTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ceeEEeCCCeE-EEcCCCCEEEEeEcC--CCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEcc
Confidence 34455444443 489999999999998 6778899999854 122 124577776667777899999
Q ss_pred CCCCCCEEEEEEEEcCCcce-EEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCc
Q psy2166 561 CYEENSGVYECRATNKYGSD-VTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENS 639 (805)
Q Consensus 561 v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~ 639 (805)
++.+|+|.|.|.|.|..+.. ...+.|.|...+... . .
T Consensus 89 v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~---------------------------------~---------~ 126 (276)
T 3auv_A 89 LQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGS---------------------------------I---------E 126 (276)
T ss_dssp CCGGGCEEEEEEECSSSSCCCCCCEEEEC---------------------------------------------------
T ss_pred CChhhCEEEEEEEecCCcccccCCEEEEEecCCCcc---------------------------------c---------c
Confidence 99999999999999865431 112333333221100 0 0
Q ss_pred EEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeec
Q psy2166 640 GVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPV 719 (805)
Q Consensus 640 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~ 719 (805)
.+.... .|+.+...+.+. .+.+|++++|.|.+.
T Consensus 127 ------------------~~~~~~--------------------------~p~~~~~~p~~~-~v~~G~~v~L~C~~~-- 159 (276)
T 3auv_A 127 ------------------GRSGGG--------------------------GSEVQLVESGGG-LVQPGGSLRLSCAAS-- 159 (276)
T ss_dssp ----------------------------------------------------CCEEEEECCE-EECTTCCEEEEEEEE--
T ss_pred ------------------cccccc--------------------------CcceEEECCCce-EecCCCeEEEEEEec--
Confidence 000000 122222334455 899999999999998
Q ss_pred CCC--CeEEEEEECC--EEc-----------------cCCCCeEEEee--CcEEEEEEcCCCCCCCEEEEEEEEcCC---
Q psy2166 720 GDQ--TMTVEFLYNG--KPI-----------------EASHRIRTVHA--FGMVVLEILGTKIEDTGVYTCRATNKW--- 773 (805)
Q Consensus 720 g~p--~~~v~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~--- 773 (805)
|.| .+.|.|+|++ ..+ ....++.+..+ .+...|.|.+++.+|+|.|+|.|.|..
T Consensus 160 g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~ 239 (276)
T 3auv_A 160 GFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPY 239 (276)
T ss_dssp SSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTC
T ss_pred CccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCc
Confidence 776 5899999963 211 12356766554 456789999999999999999999983
Q ss_pred cc--EEEEEEEEEEEeCCCc
Q psy2166 774 GQ--AEISVNLECVVWSPSQ 791 (805)
Q Consensus 774 G~--~~~~~~l~V~~~~~~~ 791 (805)
+. -...++|+|...++..
T Consensus 240 ~~~~fg~gt~l~V~~~~~~~ 259 (276)
T 3auv_A 240 AMDYWGQGTLVTVSSASAAA 259 (276)
T ss_dssp SCCCBCCCEEEEEC------
T ss_pred CceEECCCEEEEEccccccc
Confidence 21 2234678887666553
No 211
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.77 E-value=3.8e-18 Score=165.65 Aligned_cols=169 Identities=15% Similarity=0.205 Sum_probs=121.7
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+. +.|.+.|.|+|+ |..+ ....++.+...+....|.|.+++.+|+|.|.|.|
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 89 (210)
T 1lk3_L 12 VSPGEKLTISCKAS--ESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQ 89 (210)
T ss_dssp ECTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EcCCCCEEEEeeCC--CccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEE
Confidence 88999999999997 777788999984 2222 1135676666667778999999999999999999
Q ss_pred EeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..+.... ...|.|...
T Consensus 90 ~~~~~~~~~~~~~l~V~~~------------------------------------------------------------- 108 (210)
T 1lk3_L 90 SWNGPLTFGAGTKLELKRA------------------------------------------------------------- 108 (210)
T ss_dssp CSSSSCEECCCEEEEECCC-------------------------------------------------------------
T ss_pred EcCCCceeCCCEEEEEcCC-------------------------------------------------------------
Confidence 988764332 235555311
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEEEECCEEc
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEWFYNGKKL 539 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W~~~g~~l 539 (805)
..+|.+....+... +.+|+.++|.|.+.+. .|. +.|+|+|||+.+
T Consensus 109 --------------------------------~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~-~p~~~~v~W~k~g~~~ 154 (210)
T 1lk3_L 109 --------------------------------DAAPTVSIFPPSTE-QLATGGASVVCLMNNF-YPRDISVKWKIDGTER 154 (210)
T ss_dssp --------------------------------CBCCEEEEECCCHH-HHTTTEEEEEEEEEEE-BSSCCEEEEEETTEEC
T ss_pred --------------------------------CcCCeEEEECCchh-hccCCcEEEEEEEEeE-eCCceEEEEEeCCccC
Confidence 23566666555444 4589999999999953 344 599999999998
Q ss_pred cCCCce--EEE-eeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceE
Q psy2166 540 PHGHRY--RTF-HDFG----IVILDILYCYEENSGVYECRATNKYGSDV 581 (805)
Q Consensus 540 ~~~~~~--~~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 581 (805)
..+... ... ..++ .+.|.|..+..+|+|.|+|.|.|......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 155 RDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSP 203 (210)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSC
T ss_pred CCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCe
Confidence 655111 111 1111 24799999999999999999999876543
No 212
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.77 E-value=3.6e-18 Score=166.94 Aligned_cols=176 Identities=16% Similarity=0.195 Sum_probs=120.4
Q ss_pred CceecCCCcEEEEEEEecCCC-CCceEEEEECC--Ee-------------c-C--CCCceEEEecCcEEEEEEcccccCC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKND-PNLKIEWIFNG--KP-------------L-E--LGSRFKTTADFGFVTLDLTEVYDRD 135 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~k~g--~~-------------i-~--~~~~~~~~~~~~~~~L~I~~~~~~D 135 (805)
.+.+.+|+.++|.|.+. +. |.+.|.|+|.. .. . . ...|+.+...++..+|.|.+++.+|
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (218)
T 3s96_B 9 SASFSLGASAKLTCTLN--SQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPED 86 (218)
T ss_dssp EEEEETTSCEEEEEEEC--GGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEECCCCcEEEEEECC--CCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCccc
Confidence 67899999999999998 45 78899999931 10 0 0 1247777767778899999999999
Q ss_pred CeEEEEEEEeCCe-----eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 136 QGIYTCRAWNLAG-----ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 136 ~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
+|.|+|.+.+..| .......|.|...+ ..+|.+...+.
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~~~~~~~ 129 (218)
T 3s96_B 87 EAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP-------------------------------------KSTPTLTVFPP 129 (218)
T ss_dssp CEEEEEEEEEEETTEEEEEECCCEEEEEESCC-------------------------------------CBCCEEEEECC
T ss_pred CEEEEEEEecCCCCceeEEEcCcEEEEEecCC-------------------------------------CCCceEEeeCC
Confidence 9999999998765 22334566765322 13455554333
Q ss_pred cccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcE-EEEEEcC----eEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRI-RTVHAFG----MVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~-~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
... +..|+.++|.|.+.. ..|.+ .+.|+|+|..+...... .....++ ...|.|.....+|+|.|+|.|.|..
T Consensus 130 ~~~-~~~~~~v~L~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~ 207 (218)
T 3s96_B 130 SSE-ELKENKATLVCLISN-FSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEG 207 (218)
T ss_dssp CHH-HHHTTEEEEEEEEEE-EBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETT
T ss_pred Ccc-cccCCcEEEEEEECc-ccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCC
Confidence 332 446789999999852 25656 99999999998753211 1111111 2358888888889999999999998
Q ss_pred eeEEEEE
Q psy2166 285 GQAEISV 291 (805)
Q Consensus 285 g~~~~~~ 291 (805)
+..+.++
T Consensus 208 ~~~~~~~ 214 (218)
T 3s96_B 208 DTVEKSL 214 (218)
T ss_dssp EEEEEEE
T ss_pred Ccccccc
Confidence 7665544
No 213
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.77 E-value=2.7e-18 Score=167.11 Aligned_cols=171 Identities=17% Similarity=0.203 Sum_probs=123.7
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+. +.|.+.|.|+|++ ..+ ....++.+...+....|.|.++..+|+|.|+|.|
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 90 (213)
T 3d9a_L 13 VTPGNSVSLSCRAS--QSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQ 90 (213)
T ss_dssp ECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EeCCCcEEEEEECC--CCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEee
Confidence 88999999999997 7778899999853 221 1125677766777788999999999999999999
Q ss_pred EeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..+.... .+.|.|..
T Consensus 91 ~~~~~~~~~~~~~l~V~~-------------------------------------------------------------- 108 (213)
T 3d9a_L 91 SNSWPYTFGGGTKLEIKR-------------------------------------------------------------- 108 (213)
T ss_dssp CSSSSCEECCCEEEEECC--------------------------------------------------------------
T ss_pred ecCCcceeCCCEEEEEec--------------------------------------------------------------
Confidence 998765433 23555531
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-EEEEEECCEEc
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-VVEWFYNGKKL 539 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~v~W~~~g~~l 539 (805)
...+|.+....+... +.+|+.++|.|.+.+. .|.+ .++|+|||..+
T Consensus 109 -------------------------------~~~~p~v~~~~~~~~-~~~g~~~~l~C~~~g~-~p~~~~v~W~k~g~~~ 155 (213)
T 3d9a_L 109 -------------------------------ADAAPTVSIFPPSSE-QLTSGGASVVCFLNNF-YPKDINVKWKIDGSER 155 (213)
T ss_dssp -------------------------------CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEE-BSSCCEEEEEETTEEE
T ss_pred -------------------------------CCCCceeEeECCChh-hcCCCcEEEEEEEeee-cCCceEEEEEcCCCcC
Confidence 123677766555444 4479999999999852 4554 99999999998
Q ss_pred cCCCceEE--E-eeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEEE
Q psy2166 540 PHGHRYRT--F-HDFG----IVILDILYCYEENSGVYECRATNKYGSDVTK 583 (805)
Q Consensus 540 ~~~~~~~~--~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 583 (805)
..+..... . ..++ .+.|.|.++..+|+|.|+|.|.|........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 206 (213)
T 3d9a_L 156 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIV 206 (213)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEE
T ss_pred cceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceE
Confidence 76511110 1 1111 3479999999999999999999987765433
No 214
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.77 E-value=6.2e-18 Score=157.95 Aligned_cols=163 Identities=18% Similarity=0.251 Sum_probs=119.7
Q ss_pred CceecccccccccCCCceEEEEEEEeeCCCC-CeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEE
Q psy2166 203 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQ-TMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT 281 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p-~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 281 (805)
|.+...+... .+.+|+.+.|.|.+ .+.| .+.+.|+|+|..+..... .+.+.+++.+|+|.|+|.+.
T Consensus 5 p~i~~~p~~~-~v~~G~~v~l~C~~--~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~ 71 (170)
T 3ry4_A 5 AVLKLEPPWI-NVLQEDSVTLTCQG--ARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTG 71 (170)
T ss_dssp CEEEEESCCS-EEETTCEEEEEEES--CCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEET
T ss_pred CEEEeCCCCe-EEECCCcEEEEEEe--cCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEe
Confidence 5566555544 37899999999988 4555 679999999999876533 35667899999999999999
Q ss_pred cCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEeCcE
Q psy2166 282 NKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 361 (805)
Q Consensus 282 n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 361 (805)
|..... .+.+.|. .++.+...+ .. .+.+|+.+.|.|.+.+ +.|.+.+.|+++|..+.... ..
T Consensus 72 ~~~~s~--~~~l~v~-----~~~~~~~~~-~~-~~~~g~~~~l~C~~~~-~~p~~~~~W~~~g~~~~~~~--------~~ 133 (170)
T 3ry4_A 72 QTSLSD--PVHLTVL-----FEWLVLQTP-HL-EFQEGETIMLRCHSWK-DKPLVKVTFFQNGKSQKFSH--------LD 133 (170)
T ss_dssp TSBCCC--CEEEEEE-----CCSEEEECS-CS-EECTTCCEEEEEEEGG-GCCEEEEEEEETTEEEEEES--------SC
T ss_pred CCCceE--eEEEEEE-----CCceEecCC-Cc-eeecCCeEEEEEECCC-CCCCceEEEEECCeEccccC--------CC
Confidence 754433 4555555 233333332 22 3788999999999952 66779999999998864211 12
Q ss_pred EEEEEcccCcCCceEEEEEEEeCceee-EEEEEEEE
Q psy2166 362 VVMDIAYVQSHDSGEYVCRAWNKYGED-FTRATIKC 396 (805)
Q Consensus 362 ~~l~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V 396 (805)
..|.|.++..+|+|.|+|.|.|..|.. ...+.|.|
T Consensus 134 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 134 PTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 369999999999999999999999863 33455554
No 215
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.76 E-value=2.4e-18 Score=143.63 Aligned_cols=93 Identities=22% Similarity=0.420 Sum_probs=86.0
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC--CeEEEeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH--RIRTVHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
.||+|...+.+. .+.+|+.+.|.|.+. |.|.|.|+|+|||+.+.... ++.+...++..+|.|.+++.+|+|.|+|
T Consensus 4 ~PP~i~~~p~~~-~v~~G~~~~l~C~~~--g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 3knb_A 4 IPPKIEALPSDI-SIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEEECCCCSEE-EEETTSEEEEEEEEE--EESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCcE-EEeCCCeEEEEEEEE--EecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEE
Confidence 589999999998 999999999999999 99999999999999997654 6777788888899999999999999999
Q ss_pred EEEcCCccEEEEEEEEEE
Q psy2166 768 RATNKWGQAEISVNLECV 785 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~ 785 (805)
.|.|.+|.++.++.|.|+
T Consensus 81 ~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 81 SLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCEEEEEEEEEEE
Confidence 999999999999999986
No 216
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.76 E-value=1.4e-17 Score=166.74 Aligned_cols=180 Identities=18% Similarity=0.225 Sum_probs=123.8
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
++.+.+.+|+.++|.|.+.+...+.+.|.|+|+ +..+ ....|+.+..+ ++..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 346789999999999999832113679999994 3221 12357777654 46779999999
Q ss_pred ccCCCeEEEEEEEeCCee-----EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 132 YDRDQGIYTCRAWNLAGE-----TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~-----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
+.+|+|.|+|.+.|..|. ......|.|.. +|.+.
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~-----------------------------------------~~~v~ 125 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS-----------------------------------------DIELT 125 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECC-----------------------------------------CCCEE
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeecc-----------------------------------------cccEE
Confidence 999999999999998552 12234566542 23333
Q ss_pred cccccccccCCCceEEEEEEEeeCCCCCe-----EEEEEE--CCEEcc------------CCCcEEEEEEcCeEEEEEcC
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQTM-----TVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILG 267 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-----~i~W~k--~g~~l~------------~~~~~~~~~~~~~~~L~i~~ 267 (805)
..+... .+.+|++++|.|.+ .+.|.+ .+.|+| +|..+. ...++..........|.|.+
T Consensus 126 ~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 202 (256)
T 1nqb_A 126 QTPLSL-PVSLGDQASISCRS--SQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 202 (256)
T ss_dssp EECSEE-EECTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ecCcEE-EEecCCcEEEEeEe--cCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECC
Confidence 333332 47899999999998 566654 999999 665431 13455554455677899999
Q ss_pred CCCcccEEEEEEEEcCCeeE-EEEEEEEEe
Q psy2166 268 TKIEDTGVYTCRATNKWGQA-EISVNLECV 296 (805)
Q Consensus 268 ~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~ 296 (805)
++.+|+|.|+|.+.+..... .....|.|.
T Consensus 203 v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 203 VEAEDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CChHHCEEEEEEEccCCceEECCCEEEEEE
Confidence 99999999999999854322 223345543
No 217
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=6.2e-18 Score=169.70 Aligned_cols=181 Identities=19% Similarity=0.189 Sum_probs=122.2
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec----------------CCCCceEEEec--CcEEEEEEcccccC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL----------------ELGSRFKTTAD--FGFVTLDLTEVYDR 134 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i----------------~~~~~~~~~~~--~~~~~L~I~~~~~~ 134 (805)
.+.+.+|+.|+|.|.+.+...+.+.|.|+|+ +..+ ....|+.+..+ ++..+|+|.+++.+
T Consensus 9 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 9 PGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp CSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred CccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 5689999999999999842223789999995 2211 02457877664 56779999999999
Q ss_pred CCeEEEEEEEeCCe-------eE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCce
Q psy2166 135 DQGIYTCRAWNLAG-------ET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQF 205 (805)
Q Consensus 135 D~G~Y~C~a~n~~g-------~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 205 (805)
|+|.|+|.|.|..| .. ...+.|.|...+.. .|.. .......++.+
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~-----~~~~---------------------~~~~~~~~~~~ 142 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGG-----SGGG---------------------GSGGGGSDIKL 142 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCS-----SCCS---------------------SSCCCCCEECS
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCcc-----cccc---------------------ccCCCccceEE
Confidence 99999999999753 11 12346666543210 0000 00000012333
Q ss_pred ecccccccccCCCceEEEEEEEeeCCCCCeEEEEEE--CCEEcc------------CCCcEEEEEEcCeEEEEEcCCCCc
Q psy2166 206 TSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILGTKIE 271 (805)
Q Consensus 206 ~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~ 271 (805)
...+... .+.+|++++|.|.+ .+.|.+.+.||| +|..+. ...++..........|.|.+++.+
T Consensus 143 ~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 219 (257)
T 1f3r_B 143 TQSPSLL-SASVGDRVTLSCKG--SQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPE 219 (257)
T ss_dssp CEETSEE-CCCTTCCEEEEEEC--SSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGG
T ss_pred EccCCEE-EEcCCCCEEEEEEE--CCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChh
Confidence 3333333 47899999999998 677778999999 565431 134555544556778999999999
Q ss_pred ccEEEEEEEEcCC
Q psy2166 272 DTGVYTCRATNKW 284 (805)
Q Consensus 272 d~G~Y~C~~~n~~ 284 (805)
|+|.|+|.|.|..
T Consensus 220 D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 220 DVATYFCYQYNNG 232 (257)
T ss_dssp GCSEEEEEEESSS
T ss_pred hCEEEEEEEeCCC
Confidence 9999999999975
No 218
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=167.07 Aligned_cols=191 Identities=17% Similarity=0.172 Sum_probs=127.2
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-----------------CCCCceEEEec--CcEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-----------------ELGSRFKTTAD--FGFV 124 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-----------------~~~~~~~~~~~--~~~~ 124 (805)
|.+....+..+.+.+|++|+|.|.+.+...+.+.|.|+|. +..+ ....|+.+..+ ++.+
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 85 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTA 85 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEE
Confidence 4444455558899999999999999842236779999973 2111 11357877743 5677
Q ss_pred EEEEcccccCCCeEEEEEEEeC------------CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCC
Q psy2166 125 TLDLTEVYDRDQGIYTCRAWNL------------AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPA 192 (805)
Q Consensus 125 ~L~I~~~~~~D~G~Y~C~a~n~------------~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 192 (805)
+|+|.+++.+|+|.|.|.+.+. .+.......|.|...+.... +.
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~----~~-------------------- 141 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSG----GG-------------------- 141 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC------------------------------
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCccccc----cc--------------------
Confidence 8999999999999999999986 22333345566654321100 00
Q ss_pred CCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEEC--CEEcc------------CCCcEEEEEE
Q psy2166 193 GVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYN--GKPIE------------ASHRIRTVHA 257 (805)
Q Consensus 193 ~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~--g~~l~------------~~~~~~~~~~ 257 (805)
.......+|.+...+... .+.+|++++|.|.+ .+.+. +.+.|||. +..+. ...++.....
T Consensus 142 --~~~~~~~~~~~~~~~~~~-~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 216 (256)
T 3juy_B 142 --GSGGGGSEIVLTQAPGTL-SLSPGERATFSCRS--SHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGS 216 (256)
T ss_dssp ------CCCCCCEEEECSEE-EECTTSCEEEEEEE--SSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE
T ss_pred --ccCCCcceeEEEecCCeE-EEeCCCCEEEEEEE--CCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEcc
Confidence 000001245555555544 48899999999998 55555 89999983 32221 2345555555
Q ss_pred cCeEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 258 FGMVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 258 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
.....|.|.+++.+|+|.|.|.|.|...
T Consensus 217 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 217 GTDFTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp TTEEEEEESSCCGGGCSEEEEEECCSSC
T ss_pred CCEEEEEECCCCHhHCEEEEEEEeeCCC
Confidence 6678899999999999999999988543
No 219
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=1.1e-18 Score=165.45 Aligned_cols=163 Identities=13% Similarity=0.207 Sum_probs=109.9
Q ss_pred eecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcc-cccCCCeEEEEEEEeCCeeEEEEEE
Q psy2166 77 KLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTE-VYDRDQGIYTCRAWNLAGETFTSTT 155 (805)
Q Consensus 77 ~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~-~~~~D~G~Y~C~a~n~~g~~~~~~~ 155 (805)
.+.+|+.++|.|.+. + +. .|+|+|||..+..+. ++ +|.|.+ ++.+|+|.|+|.|.|..|.......
T Consensus 10 v~~~G~~v~L~C~~~--~-~~-~i~W~k~g~~l~~~~-------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 76 (186)
T 1jbj_A 10 VSISGTSVELTCPLD--S-DE-NLKWEKNGQELPQKH-------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLK 76 (186)
T ss_dssp EEEETTEEEEECSSC--C-CT-TCEEEETTEEECSCC-------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEEC
T ss_pred EEeCCcEEEEEEeCC--C-CC-ceEEEECCEECCCCC-------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEE
Confidence 446899999999987 4 33 499999999987641 11 799999 9999999999999999887554544
Q ss_pred EEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec------ccccccccCCCceEEEEEEEee
Q psy2166 156 IYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS------EFQHLSNLSEGEIAHFEASLIP 229 (805)
Q Consensus 156 l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~~v~~g~~~~l~C~~~~ 229 (805)
+.|............ ........+|.+.. .+.....+.+|+.+.|.|.+
T Consensus 77 ~~v~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-- 131 (186)
T 1jbj_A 77 ARVGSADDAKKDAAK-----------------------KDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-- 131 (186)
T ss_dssp CCCCSCCCCCCCCCC-----------------------CCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS--
T ss_pred EEEeccccccccccc-----------------------ccccccCCccccccccccccccccceecCCCCeEEEEeeC--
Confidence 444332111000000 00000001111110 00111235699999999964
Q ss_pred CCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 230 VGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 230 ~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
|.|.|.|+|+|..+..... ....|.|.+++.+|+|.|+|.|.|..|..
T Consensus 132 ---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 132 ---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp ---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ---CCCeEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 6789999999999874432 22469999999999999999999988765
No 220
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.76 E-value=9.1e-18 Score=163.36 Aligned_cols=174 Identities=15% Similarity=0.147 Sum_probs=122.4
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee------------cCCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP------------LELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~------------i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|+.++|.|.+. +.|.+.|.|+|.+ .. .....|+.+...++..+|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3r06_A 8 PSSLPASLGDRVTINCQAS--QDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGS 85 (213)
T ss_dssp CSEEEECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSE
T ss_pred CCEEEecCCCcEEEEEEeC--CCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEE
Confidence 3467899999999999998 5688899999832 11 112458888777778899999999999999
Q ss_pred EEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 139 YTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 139 Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|+|.|.|..+.. .....|.|.... .+|.+...+.... +.+
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~v~~~~~~~~-~~~ 126 (213)
T 3r06_A 86 YYCQQYYNYPWTFGPGTKLEIKRAD--------------------------------------AKPTVSIFPPSSE-QLG 126 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCC--------------------------------------BCCEEEEECCCHH-HHT
T ss_pred EEEecccCCceEEcCCceEEEeccC--------------------------------------CCceeeeeCCCce-ecC
Confidence 999998875432 233456663211 4466655444432 456
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCC-cEEEEE--EcC----eEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH-RIRTVH--AFG----MVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~-~~~~~~--~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
|+.++|.|.+.....+.+.+.|+|+|..+.... ...... .++ .+.|.|.....+|+|.|+|.|.|.....
T Consensus 127 ~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 127 TGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred CCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 888999999853323357999999999887532 111011 111 2468888888899999999999976443
No 221
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.76 E-value=6.1e-18 Score=165.30 Aligned_cols=174 Identities=17% Similarity=0.252 Sum_probs=119.7
Q ss_pred cccCCCeEEEEEEEeecCC-CCcEEEEEECC--EE-------------cc---CCCceEEEEeCcEEEEEEcccCcCCce
Q psy2166 315 GLKDGDSAHFECTLTPVND-PELKVEWFHNG--KP-------------IF---HKNRVKMVSDFGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 315 ~~~~g~~~~l~C~~~~~~~-p~~~v~W~~~g--~~-------------l~---~~~~~~~~~~~~~~~l~i~~v~~~d~G 375 (805)
.+.+|+.++|.|.+. +. |.+.+.|+|.. .. .. ...++.+........|.|.+++.+|+|
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 11 SFSLGASAKLTCTLN--SQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEETTSCEEEEEEEC--GGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EECCCCcEEEEEECC--CCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 388999999999998 66 88899999821 10 00 123666666667788999999999999
Q ss_pred EEEEEEEeCce-----eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeec
Q psy2166 376 EYVCRAWNKYG-----EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLK 450 (805)
Q Consensus 376 ~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (805)
.|.|.+.|..| .....+.|.|...+
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------------------- 118 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQP-------------------------------------------------- 118 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCC--------------------------------------------------
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCC--------------------------------------------------
Confidence 99999998775 22233566654211
Q ss_pred CCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-E
Q psy2166 451 EGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-V 529 (805)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~ 529 (805)
..+|.+....+... +..|+.++|.|.+.+ ..|.+ .
T Consensus 119 ------------------------------------------~~~P~~~~~~~~~~-~~~~~~v~L~C~~~g-~~p~~~~ 154 (218)
T 3s96_B 119 ------------------------------------------KSTPTLTVFPPSSE-ELKENKATLVCLISN-FSPSGVT 154 (218)
T ss_dssp ------------------------------------------CBCCEEEEECCCHH-HHHTTEEEEEEEEEE-EBSSCCE
T ss_pred ------------------------------------------CCCceEEeeCCCcc-cccCCcEEEEEEECc-ccCCCeE
Confidence 25566666554443 556799999999995 25655 9
Q ss_pred EEEEECCEEccCCCceE--EEeeCCE---EEEEEccCCCCCCEEEEEEEEcCCcceEEEE
Q psy2166 530 VEWFYNGKKLPHGHRYR--TFHDFGI---VILDILYCYEENSGVYECRATNKYGSDVTKA 584 (805)
Q Consensus 530 v~W~~~g~~l~~~~~~~--~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 584 (805)
|+|+|||.++..+.... ...++.. +.|.|.....+|+|.|+|.|.|..|.....+
T Consensus 155 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 155 VAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred EEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 99999999996532111 1112222 3488888888899999999999987665443
No 222
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.76 E-value=1.4e-17 Score=158.71 Aligned_cols=161 Identities=19% Similarity=0.182 Sum_probs=112.7
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEECCEecC---CC---------------CceEEEecCcEEEEEEcccccCC
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLE---LG---------------SRFKTTADFGFVTLDLTEVYDRD 135 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~---~~---------------~~~~~~~~~~~~~L~I~~~~~~D 135 (805)
..+.+.+|++|+|.|.+.+ +.+.+.|.|+|+|..+. .+ +|+.+.. ..+|+|.+++.+|
T Consensus 6 ~~v~~~~G~~v~L~C~~~~-~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~sL~I~~v~~~D 81 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPA-GEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ---SYSLQLSNLKMED 81 (193)
T ss_dssp EEEEEETTSCEEECCCCCC-CSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECT---TCCEEECSCCGGG
T ss_pred eEEEEEecCeEEEeccCCC-cccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECC---CeEEEECCCCccc
Confidence 3568899999999999873 24557999999986542 11 2444442 2379999999999
Q ss_pred CeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 136 QGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 136 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
+|.|.|.+.+..+.......|.|..++. .|.+..... ..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~~--------------------------------------~p~i~~~~~---~~ 120 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQLR--------------------------------------NIQVTNHSQ---LF 120 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCCE--------------------------------------EEEEEECCC-----
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccCC--------------------------------------CCeEecCce---ee
Confidence 9999999999887766677787764321 133333221 13
Q ss_pred CCCc-eEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCc-ccEEEEEEEEcCCeeEEEEE
Q psy2166 216 SEGE-IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIE-DTGVYTCRATNKWGQAEISV 291 (805)
Q Consensus 216 ~~g~-~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~~~n~~g~~~~~~ 291 (805)
..|. .++|.|.+. .+.|.+.|.|+++|..+.... .|.|.....+ |+|.|+|.|.|..|..+..+
T Consensus 121 ~~g~~~v~L~C~~~-g~~p~p~i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 121 QNMTCELHLTCSVE-DADDNVSFRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp -CSSEEEEEEEEEE-SCCTTCEEEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred cCCCceEEEEEEEe-cCCCceEEEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 3465 899999984 235689999999998764322 3555433444 89999999999998875543
No 223
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.76 E-value=1.6e-17 Score=161.44 Aligned_cols=172 Identities=15% Similarity=0.201 Sum_probs=121.3
Q ss_pred ccCCCeEEEEEEEeecCCC---CcEEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDP---ELKVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 378 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p---~~~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 378 (805)
+.+|+.++|.|.+. +.| .+.|.|+|++ ..+ ....++.+...++...|.|.+++.+|+|.|.
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (212)
T 1q0x_L 12 TSPGETVTLTCRSS--TGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYF 89 (212)
T ss_dssp ECTTCCEEEEEEES--SSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ecCCCCEEEEEEec--ccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEE
Confidence 88999999999997 555 4789999852 222 1235666666667778999999999999999
Q ss_pred EEEEeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEE
Q psy2166 379 CRAWNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHF 457 (805)
Q Consensus 379 C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (805)
|.+.|..+... ....|.|...
T Consensus 90 C~~~~~~~~~~~~~~~l~V~~~---------------------------------------------------------- 111 (212)
T 1q0x_L 90 CALWSNNKLVFGGGTKLTVLGQ---------------------------------------------------------- 111 (212)
T ss_dssp EEEECSSCEEECCCEEEEECCS----------------------------------------------------------
T ss_pred EEEecCchhhcCCCeEEEEecC----------------------------------------------------------
Confidence 99999876432 2234544211
Q ss_pred EEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCE
Q psy2166 458 EARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGK 537 (805)
Q Consensus 458 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~ 537 (805)
...+|.+....+... +.+|+.++|.|.+.+...+++.|+|+|||+
T Consensus 112 ----------------------------------~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 156 (212)
T 1q0x_L 112 ----------------------------------PKSSPTVTLFPPSSE-ELSTAKATLVCTITDFYPGVVTVDWKVDGT 156 (212)
T ss_dssp ----------------------------------CCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ----------------------------------CCCCCeeEEeCCCHH-HccCCcEEEEEEEEEEeCCCeEEEEEECCE
Confidence 124677766555443 557999999999996322234999999999
Q ss_pred EccCCCceE--EEeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEE
Q psy2166 538 KLPHGHRYR--TFHDFG----IVILDILYCYEENSGVYECRATNKYGSDVT 582 (805)
Q Consensus 538 ~l~~~~~~~--~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 582 (805)
.+..+.+.. ....++ .+.|.|..+..+|+|.|+|.|.|.......
T Consensus 157 ~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 157 PVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp EECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred eCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 987652211 111121 346999999999999999999998765443
No 224
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.76 E-value=5.5e-18 Score=164.63 Aligned_cols=172 Identities=14% Similarity=0.152 Sum_probs=125.5
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEEcc------------CCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKPIF------------HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+ . +.+.+.|+|+ +..+. ...++.+........|.|.+++.+|+|.|+|.+
T Consensus 12 v~~G~~v~L~C~~---~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 87 (211)
T 3tv3_L 12 GSPGQSITISCTG---T-SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGS 87 (211)
T ss_dssp ECTTCEEEEEEEC---C-CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEE
T ss_pred EcCCCCEEEEEEE---C-CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEE
Confidence 8899999999998 4 7889999994 32221 235666666677788999999999999999999
Q ss_pred EeCce--eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEE
Q psy2166 382 WNKYG--EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEA 459 (805)
Q Consensus 382 ~n~~g--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (805)
.|..+ .....+.|.|...
T Consensus 88 ~~~~~~~~~~~~~~l~V~~~------------------------------------------------------------ 107 (211)
T 3tv3_L 88 LVGNWDVIFGGGTKLTVLGQ------------------------------------------------------------ 107 (211)
T ss_dssp EETTTEEEECCCEEEEECCS------------------------------------------------------------
T ss_pred ecCCCceeECCCceEEEeCC------------------------------------------------------------
Confidence 99887 2334456665321
Q ss_pred EEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEc
Q psy2166 460 RLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKL 539 (805)
Q Consensus 460 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l 539 (805)
...+|.+...+.... +.+|+.++|.|.+.+...|.+.++|+|||..+
T Consensus 108 --------------------------------~~~~P~v~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 154 (211)
T 3tv3_L 108 --------------------------------PKAAPSVTLFPPSSE-ELQANKATLVCLISDFYPGAVTVAWKADSSPV 154 (211)
T ss_dssp --------------------------------CCBCCEEEEECCCHH-HHHTTCEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred --------------------------------CCcCCeeEecCCchh-hhcCCCeEEEEEeeeecCCCeEEEEEECCeec
Confidence 135677776665544 45899999999999643457899999999998
Q ss_pred cCCCceE--EEeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEEEE
Q psy2166 540 PHGHRYR--TFHDFG----IVILDILYCYEENSGVYECRATNKYGSDVTKA 584 (805)
Q Consensus 540 ~~~~~~~--~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 584 (805)
..+.... ....++ .+.|.|..+..+|+|.|+|.|.|..+....++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 155 KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 6531110 111111 24699999888999999999999987766554
No 225
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.75 E-value=1.7e-17 Score=166.39 Aligned_cols=146 Identities=17% Similarity=0.126 Sum_probs=101.7
Q ss_pred CCEEEEEeccCCCCCcEEEEEEEEeC------------CcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCC
Q psy2166 624 FGIVILDILYCYEENSGVYECRATNK------------YGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRP 691 (805)
Q Consensus 624 ~~~~~L~i~~~~~~d~G~Y~C~a~n~------------~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~ 691 (805)
++...|.|.+++.+|+|.|.|.|.|. .+.......|.|...+.... |. .......+
T Consensus 82 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~----~~--------~~~~~~~~ 149 (256)
T 3juy_B 82 ANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSG----GG--------GSGGGGSE 149 (256)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------------------CCCC
T ss_pred CCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCccccc----cc--------ccCCCcce
Confidence 34567999999999999999999997 33333456677765321000 00 00000125
Q ss_pred CeeeecCCcccccCCCCeEEEEEEEeecCCCC-eEEEEEEC--CEEcc------------CCCCeEEEeeCcEEEEEEcC
Q psy2166 692 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILG 756 (805)
Q Consensus 692 P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~-~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~ 756 (805)
|.+...+.+. .+.+|++++|.|.+. +.|. +.|.|+|. +..+. ...++.+..++....|+|.+
T Consensus 150 ~~~~~~~~~~-~v~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 226 (256)
T 3juy_B 150 IVLTQAPGTL-SLSPGERATFSCRSS--HSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITR 226 (256)
T ss_dssp CCEEEECSEE-EECTTSCEEEEEEES--SCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred eEEEecCCeE-EEeCCCCEEEEEEEC--CCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECC
Confidence 6777778888 999999999999998 7776 89999982 32221 24577776777788999999
Q ss_pred CCCCCCEEEEEEEEcCCccEE-EEEEEEE
Q psy2166 757 TKIEDTGVYTCRATNKWGQAE-ISVNLEC 784 (805)
Q Consensus 757 v~~~d~G~Y~C~a~N~~G~~~-~~~~l~V 784 (805)
++.+|+|.|.|.|.|..+... ..+.|.|
T Consensus 227 v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 227 VEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp CCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred CCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 999999999999999655322 2334444
No 226
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.75 E-value=3.1e-18 Score=162.31 Aligned_cols=160 Identities=14% Similarity=0.182 Sum_probs=120.2
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEECCEE--ccC------------CCcEEEEE---EcCeEEEEEcCCCCcccEEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYNGKP--IEA------------SHRIRTVH---AFGMVVLEILGTKIEDTGVY 276 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~--l~~------------~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y 276 (805)
.+.+|+.++|.|.+ .+.|.+.+.|+|++.. +.. ..++.... .++...|.|.+++.+|+|.|
T Consensus 6 ~~~~G~~v~L~C~~--~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 6 LGKKGDTVELTCTA--SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEETTSCEEECCBC--SSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred EEeCCCCEEEEEEE--cCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 47899999999987 5788899999999863 211 11222211 23356799999999999999
Q ss_pred EEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEE
Q psy2166 277 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 356 (805)
Q Consensus 277 ~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~ 356 (805)
+|.+.|..+ .+.+.|.. +.. +... .+.+|+.++|.|.+. +.|.+.+.|++++..+.
T Consensus 84 ~C~~~~~~~----~~~l~V~~--------~~~-~~~~-~v~~g~~~~l~C~~~--~~p~~~v~W~~~~~~~~-------- 139 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG--------LTA-NSDT-HLLQGQSLTLTLESP--PGSSPSVQCRSPRGKNI-------- 139 (184)
T ss_dssp EEEETTEEE----EEEEEEEE--------EEE-SSCS-EEETTCCEEEEEECC--TTCCCEEEEECTTSCEE--------
T ss_pred EEEEEcCCC----cEEEEEEE--------ecC-CCCc-eeecCCCEEEEEEcC--CCCCCEEEEEeCCCccc--------
Confidence 999988754 33444431 111 2222 378999999999997 77999999999876541
Q ss_pred EeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEeccc
Q psy2166 357 SDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 357 ~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 401 (805)
.... .|.|.++..+|+|.|+|.|.|..+.....+.|.|.+.|.
T Consensus 140 ~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 140 QGGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp EESS--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred cCce--EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 1222 699999999999999999999999999999999986553
No 227
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.75 E-value=1.8e-17 Score=166.34 Aligned_cols=152 Identities=16% Similarity=0.091 Sum_probs=104.4
Q ss_pred CEEEEEeccCCCCCcEEEEEEEEeC----CcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCc
Q psy2166 625 GIVILDILYCYEENSGVYECRATNK----YGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQH 700 (805)
Q Consensus 625 ~~~~L~i~~~~~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~ 700 (805)
+...|.|.+++.+|+|.|.|.|.|. .+.....+.|.|...+...... ........+|.+...+..
T Consensus 79 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~-----------~~~~~~~~~~~~~~~p~~ 147 (256)
T 3umt_A 79 STAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGG-----------GSGGGGSTDIQLTQSPSS 147 (256)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC--------------------------CCCCEEEECSE
T ss_pred CEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCc-----------ccCCCCccccEEEcCCCe
Confidence 4567999999999999999999998 3333445677776421000000 000000026777777877
Q ss_pred ccccCCCCeEEEEEEEeecCCCCeEEEEEEC--CEEcc------------CCCCeEEEeeCcEEEEEEcCCCCCCCEEEE
Q psy2166 701 LSNLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGVYT 766 (805)
Q Consensus 701 ~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 766 (805)
. .+.+|++++|.|.+. +.|.+.|.|+|+ |..+. ...++.....+...+|+|.+++.+|+|.|.
T Consensus 148 ~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 224 (256)
T 3umt_A 148 L-SASLGERVSITCRAS--QDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYY 224 (256)
T ss_dssp E-EECTTCCEEEEEEES--SCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEE
T ss_pred E-EEECCCCEEEEEEEe--cCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEE
Confidence 7 899999999999998 888889999994 22211 235677666777889999999999999999
Q ss_pred EEEEcCCccEE-EEEEEEEEEeCCC
Q psy2166 767 CRATNKWGQAE-ISVNLECVVWSPS 790 (805)
Q Consensus 767 C~a~N~~G~~~-~~~~l~V~~~~~~ 790 (805)
|.|.|..+... ..++|+|...++.
T Consensus 225 C~~~~~~~~~fg~gt~L~V~~~~~~ 249 (256)
T 3umt_A 225 CLQYASSPPTFGGGTKLEIKRAAAL 249 (256)
T ss_dssp EEECSSSSCEECCCEEEEEC-----
T ss_pred EEEeeCCCcEECCCEEEEEECCCcc
Confidence 99999765433 3567888765544
No 228
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.75 E-value=7.1e-18 Score=170.71 Aligned_cols=205 Identities=16% Similarity=0.240 Sum_probs=123.7
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecC-CCCCceEEEEECCEecCCC------------------CceEEEec--CcEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPK-NDPNLKIEWIFNGKPLELG------------------SRFKTTAD--FGFV 124 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~-~~p~~~v~W~k~g~~i~~~------------------~~~~~~~~--~~~~ 124 (805)
+.+...++ .+.+.+|+.++|.|.+... +.+.+.|.|+|++...... .|+.+..+ .+..
T Consensus 6 ~~v~~~~~-~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 6 PGLTVSSP-QLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp ------CC-EEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred cccccCCC-ceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 33444444 6789999999999998732 4677889999966433221 34444221 2235
Q ss_pred EEEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCc
Q psy2166 125 TLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQ 204 (805)
Q Consensus 125 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 204 (805)
+|.|.+++.+|+|.|+|.+.+..+.......+.+.+.+ .+|.
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~--------------------------------------~~p~ 126 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP--------------------------------------EEPR 126 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC--------------------------------------CCCS
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec--------------------------------------cCCC
Confidence 79999999999999999999876554333333333221 1111
Q ss_pred eecccccccccCCCceEEEEEEEee-CCCCCeEEEEEEC-CEEccCC---------------------CcEEEEE--EcC
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIP-VGDQTMTVEFLYN-GKPIEAS---------------------HRIRTVH--AFG 259 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~-~~~p~~~i~W~k~-g~~l~~~---------------------~~~~~~~--~~~ 259 (805)
...+.+|+.++|.|.+.. .+.|.+.+.|+++ +..+... .+..... ...
T Consensus 127 -------~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 199 (268)
T 3mj6_A 127 -------DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRN 199 (268)
T ss_dssp -------EEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGT
T ss_pred -------ccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCC
Confidence 124779999999998742 3668899999994 3221110 0111100 123
Q ss_pred eEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCe
Q psy2166 260 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 321 (805)
Q Consensus 260 ~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~ 321 (805)
...|.|.+++.+|+|.|+|.|.|..+.....+.|.|.. .+|.+...+.... +.+|+.
T Consensus 200 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----~~p~~~~~p~~~~-~~~~q~ 256 (268)
T 3mj6_A 200 DGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ----DEFQRTISPTPPT-DKGQQG 256 (268)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----C-------------------
T ss_pred eEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc----CCCeeeeCCCCCC-CCccee
Confidence 46899999999999999999999999999999998865 4455554444333 444444
No 229
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.75 E-value=2.8e-18 Score=172.28 Aligned_cols=257 Identities=13% Similarity=0.098 Sum_probs=102.9
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-CCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-ELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETF 151 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 151 (805)
.+.|.+|+.++|+|.+... .| ..+.|.-. +..+ ..+. ....|.|.+++.+ |.|.|.+.......+
T Consensus 8 ~~~V~~G~sv~l~Cs~~c~-~p-~~~~~~t~l~~~~~~~~g~--------~~~~~~l~~v~~~--~~y~C~~~~~~~~~~ 75 (291)
T 1mq8_A 8 KVILPRGGSVLVTCSTSCD-QP-KLLGIETPLPKKELLLPGN--------NRKVYELSNVQED--SQPMCYSNCPDGQST 75 (291)
T ss_dssp EEEECTTCEEEEEEEECCS-SC-SEEEEECSSCCCCCCCSCS--------SEEEEEEESCCSC--CCCEEEEECSSCEEE
T ss_pred ccEEcCCCeEEEEEeCCCC-CC-ccceEEecCCCcccccCCC--------ceEEEEEEecccC--CeEEEEEEcCCccEE
Confidence 6789999999999999732 32 24888631 1111 1111 2225778888753 469999976544455
Q ss_pred EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCC
Q psy2166 152 TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVG 231 (805)
Q Consensus 152 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~ 231 (805)
....|.|..+|.. |.+...+ ..+.+|+.++|.|.+. .+
T Consensus 76 ~~v~l~V~~~P~~--------------------------------------v~I~~~~---~~~~~G~~~~LtC~v~-g~ 113 (291)
T 1mq8_A 76 AKTFLTVYWTPER--------------------------------------VELAPLP---SWQPVGKNLTLRCQVE-GG 113 (291)
T ss_dssp EECEEEECBCCSC--------------------------------------CCBCCCC---SBCCSSCCCEEEEEEC-CC
T ss_pred EEEEEEEecCCCC--------------------------------------CEEecCC---ccccCCCCEEEEEEec-Cc
Confidence 5667777655422 2222221 1277999999999985 34
Q ss_pred CCC--eEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee--------EEEEEEEEEeccCCC
Q psy2166 232 DQT--MTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ--------AEISVNLECVDKSKG 301 (805)
Q Consensus 232 ~p~--~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~--------~~~~~~l~v~~~~~~ 301 (805)
.|. +.|+|||+++.+..... .......+|.+.....+|.+.|+|+|.|..+. .+....+.|+..+..
T Consensus 114 ~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~ 190 (291)
T 1mq8_A 114 APRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPAT 190 (291)
T ss_dssp BSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC------
T ss_pred cCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCC
Confidence 454 47999999988754321 11112356777777777777999999986442 234455666542110
Q ss_pred CCCeEEecCCCcccccCCCeEEEEEEEeecCCCC---cEEEEEECCEEccCCCceEEEEeCcEEEEEEc-ccCc--CCce
Q psy2166 302 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE---LKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIA-YVQS--HDSG 375 (805)
Q Consensus 302 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~---~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~-~v~~--~d~G 375 (805)
.+.+.. +. .+.+|+.++|.|.+. +.++ ..+.|+++|+.+.... ..++...++... .+.. ++.+
T Consensus 191 -~~~~~~---p~-~l~eG~~v~l~C~~~--g~~P~~~~~v~w~~~g~~l~~~~----~~~g~~~~~~~~~~~~~~~~~~~ 259 (291)
T 1mq8_A 191 -PPQLVS---PR-VLEVDTQGTVVCSLD--GLFPVSEAQVHLALGDQRLNPTV----TYGNDSFSAKASVSVTAEDEGTQ 259 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CceecC---Cc-CccCCCeEEEEEEcC--CCCCCcccEEEEEECCEecCcee----eecCCeEEEEEecceeEcCCCCE
Confidence 112211 12 378999999999998 5433 3699999999986421 112222121111 1134 3466
Q ss_pred EEEEEEEeCceeeEEEEEEEEEec
Q psy2166 376 EYVCRAWNKYGEDFTRATIKCFGK 399 (805)
Q Consensus 376 ~Y~C~a~n~~g~~~~~~~l~V~~~ 399 (805)
.|+|.|.+..........|.|+..
T Consensus 260 ~~~C~~~~~~~~~~~~~~l~v~~~ 283 (291)
T 1mq8_A 260 RLTCAVILGNQSQETLQTVTIYSF 283 (291)
T ss_dssp ------------------------
T ss_pred EEEEEEEeCCcceEEEEEEEEEcC
Confidence 788998875555556677777753
No 230
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.75 E-value=6.6e-18 Score=165.12 Aligned_cols=181 Identities=13% Similarity=0.140 Sum_probs=114.7
Q ss_pred cccCCCeEEEEEEEeeCCCCCcEEEEEEC--CEEcc-----------------CCCceEEEee--CCEEEEEEccCCCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDPDLVVEWFYN--GKKLP-----------------HGHRYRTFHD--FGIVILDILYCYEEN 565 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v~~~d 565 (805)
.+.+|++++|.|.+.+.+.+.+.+.|+|+ |..+. ...|+.+..+ .+...|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 11 LKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNED 90 (219)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 48899999999999942223789999986 43221 1245655443 345679999999999
Q ss_pred CEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEE
Q psy2166 566 SGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 645 (805)
Q Consensus 566 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 645 (805)
+|.|.|.|.|..+.....+ +
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~------------------------------~------------------------------ 110 (219)
T 1c1e_H 91 MATYFCARGTTIVRAMDYW------------------------------G------------------------------ 110 (219)
T ss_dssp CEEEEEEEEETTTTEEEEE------------------------------C------------------------------
T ss_pred CEEEEEEEeccCcccceee------------------------------c------------------------------
Confidence 9999999987653211000 0
Q ss_pred EEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecC-CCCe
Q psy2166 646 ATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVG-DQTM 724 (805)
Q Consensus 646 a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p~~ 724 (805)
..+.|.|...+ ..+|.+...+... .+.+|+.++|.|.+. | .|.|
T Consensus 111 ---------~~~~l~V~~~~-----------------------~~~P~i~~~~~~~-~~~~g~~v~L~C~~~--g~~P~p 155 (219)
T 1c1e_H 111 ---------QGTSLTVSSAK-----------------------TTPPSVYPLAPGS-AAQTNSMVTLGCLVK--GYFPEP 155 (219)
T ss_dssp ---------CCEEEEECCCC-----------------------CBCCEEEEECCCS-SSCCSSEEEEEEEEE--EEBSSC
T ss_pred ---------CceEEEEecCC-----------------------CCCCeEEEecCcc-ccccCCeEEEEEEcc--cccCCC
Confidence 00112221100 0245554444344 578899999999999 7 8988
Q ss_pred -EEEEEECCEEccCCCCeEEEeeCc---EEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEE
Q psy2166 725 -TVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 783 (805)
Q Consensus 725 -~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 783 (805)
.|+|+|+|..+...........+. ...|.|..... |.|.|+|.|.|..|......+|.
T Consensus 156 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 156 VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp CEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEECC
T ss_pred eEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEecC
Confidence 999999998653211101111111 23688954444 55999999999999877666554
No 231
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.75 E-value=1.3e-17 Score=162.34 Aligned_cols=172 Identities=15% Similarity=0.170 Sum_probs=117.7
Q ss_pred EEecCCCCceecCCCcEEEEEEEecC-----CCCCceEEEEECCEec-----------------CCCCceEEEec--CcE
Q psy2166 68 FIVPLKPEFKLGEAQPLHLEAQVEPK-----NDPNLKIEWIFNGKPL-----------------ELGSRFKTTAD--FGF 123 (805)
Q Consensus 68 ~~~~~~~~~~v~~G~~v~L~C~~~~~-----~~p~~~v~W~k~g~~i-----------------~~~~~~~~~~~--~~~ 123 (805)
|.+..+..+.+.+|+.++|.|.+... +.+.+.|.|+|++... ....|+.+..+ .+.
T Consensus 2 ~~~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 81 (214)
T 2zg1_A 2 YELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKN 81 (214)
T ss_dssp CEEECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTB
T ss_pred ceeeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCe
Confidence 34555667899999999999999832 1257899999986521 12346666543 245
Q ss_pred EEEEEcccccCCCeEEEEEEEeCCeeEE----EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCC
Q psy2166 124 VTLDLTEVYDRDQGIYTCRAWNLAGETF----TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSED 199 (805)
Q Consensus 124 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (805)
.+|.|.+++.+|+|.|.|.+.+..+... ....|.|...+
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------------------------------------- 124 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI------------------------------------- 124 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC-------------------------------------
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC-------------------------------------
Confidence 5799999999999999999998763322 35666665432
Q ss_pred CCCCceecccccccccCCCceEEEEEEEeeC--CCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEE
Q psy2166 200 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPV--GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYT 277 (805)
Q Consensus 200 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~--~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 277 (805)
.+|.+... . .+.+|+.++|.|.+... +.|.|.+.|++++..+.... . .....|.|..+..+|+|.|+
T Consensus 125 -~~p~i~~~--~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~-~-----~~~~~L~i~~~~~~~~g~Y~ 193 (214)
T 2zg1_A 125 -EKPDIHFL--E--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE-T-----TRSSELTLTPRPEDHGTNLT 193 (214)
T ss_dssp -CCCEEC----C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS-C-----CCSSEEEECCCTTCCSCEEE
T ss_pred -CCCceecC--c--cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC-c-----eeEEEEEEecccHHcCcEEE
Confidence 23444331 1 26789999999987311 24789999999986543221 1 22347999999999999999
Q ss_pred EEEEcCCeeE
Q psy2166 278 CRATNKWGQA 287 (805)
Q Consensus 278 C~~~n~~g~~ 287 (805)
|.|.|..+..
T Consensus 194 C~a~n~~~~~ 203 (214)
T 2zg1_A 194 CQMKRQGAQV 203 (214)
T ss_dssp EEEECC----
T ss_pred EEEEeCCCCc
Confidence 9999976443
No 232
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=4.6e-18 Score=169.12 Aligned_cols=171 Identities=11% Similarity=0.088 Sum_probs=115.1
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE-EEEcCeEEEEEcCCCCcccEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-VHAFGMVVLEILGTKIEDTGVYTCR 279 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~ 279 (805)
.+|.|...+. ..+.+|++++|.|.+ . .+.+.+.|||+|..+........ ........|.|.+++.+|+|.|+|.
T Consensus 6 ~kP~i~~~P~--~~V~~G~~VtL~C~~--~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 80 (257)
T 1b6u_A 6 RKPSLLAHPG--PLVKSEETVILQCWS--D-VRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCY 80 (257)
T ss_dssp CCCEECCBSC--SEEESSCCEEEEEEE--S-SCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred CCCEEEEcCC--CEecCCCCEEEEEec--C-CCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence 4577776665 247899999999998 3 34578999999875432110000 0012346899999999999999999
Q ss_pred EEcCCe-----eEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceE
Q psy2166 280 ATNKWG-----QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 354 (805)
Q Consensus 280 ~~n~~g-----~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~ 354 (805)
+.+... ..+..+.|.|.... .+|.+...+.. .+.+|+.++|.|.+. +. .+.|.|+|+|..+.......
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~~~--~~P~l~~~p~~--~V~~G~~vtL~C~~~--~~-~~~~~w~k~g~~~~~~~~~~ 153 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITGLY--EKPSLSAQPGP--TVLAGESVTLSCSSR--SS-YDMYHLSREGEAHERRFSAG 153 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEECSS--CCCEEECSSCT--TCBTTCEEEEEEECS--SC-CSEEEEEETTSSCEECCBCB
T ss_pred EeccCCCccccccCCCEEEecccCC--CCcceEccCCC--ccCCCCEEEEEEeCC--CC-CcEEEEEECCcccCcccccc
Confidence 986421 22445566665432 45666655543 388999999999986 44 46899999998765322111
Q ss_pred EEE-eCcEEEEEEcccCcCCceEEEEEEEeCc
Q psy2166 355 MVS-DFGFVVMDIAYVQSHDSGEYVCRAWNKY 385 (805)
Q Consensus 355 ~~~-~~~~~~l~i~~v~~~d~G~Y~C~a~n~~ 385 (805)
... ......|.|.+++ |+|.|+|.|.+..
T Consensus 154 ~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 154 PKVNGTFQADFPLGPAT--HGGTYRCFGSFRD 183 (257)
T ss_dssp CCSSSCCBEEEEEEECC--SCEEEEEEEECSS
T ss_pred cccCCceeEEEEecccc--cCEEEEEEEEcCC
Confidence 110 1123468899998 9999999999753
No 233
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.75 E-value=3e-17 Score=164.83 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=100.6
Q ss_pred CEEEEEeccCCCCCcEEEEEEEEeCCc----ceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCc
Q psy2166 625 GIVILDILYCYEENSGVYECRATNKYG----SDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQH 700 (805)
Q Consensus 625 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~ 700 (805)
+...|.|.+++.+|+|.|+|.|.|..+ .......|.|..++... .........+|.+...+..
T Consensus 84 ~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~-------------~~~~~~~~~~~~~~~~p~~ 150 (257)
T 3gkz_A 84 NQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSG-------------GGGSGGGGSQIVLTQSPAI 150 (257)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC----------------------CTTCCCCCCEECSCSE
T ss_pred ceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhc-------------ccccCCCccceEEEcCCce
Confidence 456799999999999999999999732 22234567776531100 0000001134667777777
Q ss_pred ccccCCCCeEEEEEEEeecCCCCe-EEEEEEC--CEEcc------------CCCCeEEEeeCcEEEEEEcCCCCCCCEEE
Q psy2166 701 LSNLSEGEIAHFEASLIPVGDQTM-TVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGVY 765 (805)
Q Consensus 701 ~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 765 (805)
. .+.+|++++|.|.+. +.|.+ .+.|+|+ |..+. ...++..........|.|.+++.+|+|.|
T Consensus 151 ~-~v~~G~~v~L~C~~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 227 (257)
T 3gkz_A 151 M-SASPGEKVTLTCSAS--SSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASY 227 (257)
T ss_dssp E-EECTTCCEEEEEEES--SCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred E-EEeCCCcEEEEEEEc--cCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEE
Confidence 7 899999999999998 88877 9999983 32221 12566666667778899999999999999
Q ss_pred EEEEEcCCccEE-EEEEEEEEEeCCC
Q psy2166 766 TCRATNKWGQAE-ISVNLECVVWSPS 790 (805)
Q Consensus 766 ~C~a~N~~G~~~-~~~~l~V~~~~~~ 790 (805)
.|.|.|...... .-+.|.|...++.
T Consensus 228 ~C~~~~~~~~~fg~gt~l~v~~~~~~ 253 (257)
T 3gkz_A 228 FCHQWSSFPFTFGSGTKLEIKRAPHH 253 (257)
T ss_dssp EEEECSSSSCEECCCEEEEECCC---
T ss_pred EEEEccCCceEEcCCEEEEEEeCCCC
Confidence 999998654322 2335666554443
No 234
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.75 E-value=1.7e-17 Score=162.65 Aligned_cols=178 Identities=13% Similarity=0.163 Sum_probs=121.7
Q ss_pred CCCceecCCCcEEEEEEEecCCCC-----CceEEEEECCEec---------C------CCCceEEEec---CcEEEEEEc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP-----NLKIEWIFNGKPL---------E------LGSRFKTTAD---FGFVTLDLT 129 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p-----~~~v~W~k~g~~i---------~------~~~~~~~~~~---~~~~~L~I~ 129 (805)
+..+.+.+|+.++|.|.+. +.| .+.|.|+|++..+ . ...|+.+..+ .+..+|.|.
T Consensus 8 ~~~v~~~~G~~v~L~C~~~--~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFP--VEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSEEEEETTSCEEEEEECC--CCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred CccEEEEcCCcEEEEeEec--CCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3456889999999999987 333 4589999975332 1 1235555432 256789999
Q ss_pred ccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 130 EVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 130 ~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
+++.+|+|.|+|.+.+ .|.......|.|..++. .|.+...
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~--------------------------------------~~~~~~~- 125 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYN--------------------------------------KINQRIL- 125 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCC--------------------------------------CCEEEEE-
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCC--------------------------------------CCCceee-
Confidence 9999999999999999 56666677777764321 1211110
Q ss_pred ccccccCCCceEEEEEEEeeCCCCCeEEEEEEC-CEEccCCCcEEEEE-EcC-eEEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN-GKPIEASHRIRTVH-AFG-MVVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~-g~~l~~~~~~~~~~-~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
..+.+|+.++|.|.+ .|.|.|.+.|+++ |..+.......... .++ ...+.+..+..+|+|.|+|.|.|..|.
T Consensus 126 ---~~~~~g~~v~L~C~~--~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~ 200 (222)
T 3sbw_C 126 ---VVDPVTSEHELTCQA--EGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPE 200 (222)
T ss_dssp ---EEETTTTEEEEEEEE--EEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTT
T ss_pred ---eeecCCCcEEEEEEe--cCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccc
Confidence 135789999999998 5688999999998 66665433221111 111 111222234568999999999999999
Q ss_pred EEEEEEEEEec
Q psy2166 287 AEISVNLECVD 297 (805)
Q Consensus 287 ~~~~~~l~v~~ 297 (805)
....+.+.|..
T Consensus 201 ~~~~~~l~v~~ 211 (222)
T 3sbw_C 201 ENHTAELVIPE 211 (222)
T ss_dssp EEEEEEEECCC
T ss_pred eeeEEEEEecC
Confidence 99999888763
No 235
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.75 E-value=6e-18 Score=165.00 Aligned_cols=176 Identities=14% Similarity=0.115 Sum_probs=120.9
Q ss_pred CCCceecCCCcEEEEEEEecCCC-CCceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCCCe
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKND-PNLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G 137 (805)
+..+.+.+|+.++|.|.+.+ +. +.+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSS-SNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCT-TTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCE
T ss_pred CCcEEecCCCeEEEEEEeec-CCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCE
Confidence 34678999999999999642 23 25789999953 221 1245788777777889999999999999
Q ss_pred EEEEEEEeCCe--eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 138 IYTCRAWNLAG--ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 138 ~Y~C~a~n~~g--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
.|+|.|.|..+ .......|.|.... .+|.+....+... .
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~P~v~~~~~~~~-~ 126 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTV--------------------------------------AAPSVFIFPPSDE-Q 126 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCC--------------------------------------BCCEEEEECCCHH-H
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCC--------------------------------------CCCceEEeCCChh-h
Confidence 99999999875 22223456663211 3455554333222 2
Q ss_pred CCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE--EE-EEcC----eEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 216 SEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR--TV-HAFG----MVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~--~~-~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
.+|+.++|.|.+.. ..|. ..|.|+|+|..+....... .. ..++ .+.|.|..+..+|+|.|+|.|.|.....
T Consensus 127 ~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (216)
T 2xzc_L 127 LKSGTASVVCLLNN-FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS 205 (216)
T ss_dssp HHTTEEEEEEEEEE-EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSS
T ss_pred ccCCcEEEEEEEEe-EcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCC
Confidence 36889999999853 2455 4999999999886551111 01 1112 2479999999999999999999987554
Q ss_pred EE
Q psy2166 288 EI 289 (805)
Q Consensus 288 ~~ 289 (805)
..
T Consensus 206 ~~ 207 (216)
T 2xzc_L 206 PV 207 (216)
T ss_dssp CE
T ss_pred ce
Confidence 33
No 236
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.75 E-value=6.5e-17 Score=162.36 Aligned_cols=189 Identities=18% Similarity=0.148 Sum_probs=123.3
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--E---ec-------------CCCCceEEEec--CcEEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--K---PL-------------ELGSRFKTTAD--FGFVT 125 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~---~i-------------~~~~~~~~~~~--~~~~~ 125 (805)
+.+.+..+..+.+.+|+.|+|.|.+.+...+.+.|.|+|.. . .+ ....|+.+..+ .+.++
T Consensus 8 ~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 87 (257)
T 3gkz_A 8 KEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVY 87 (257)
T ss_dssp -CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred ccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEE
Confidence 34444444467899999999999998532457899999932 1 11 12357777654 45778
Q ss_pred EEEcccccCCCeEEEEEEEeCC----eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCC
Q psy2166 126 LDLTEVYDRDQGIYTCRAWNLA----GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGR 201 (805)
Q Consensus 126 L~I~~~~~~D~G~Y~C~a~n~~----g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (805)
|.|.+++.+|+|.|.|.|.|.. ........|.|......... .......
T Consensus 88 L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~---------------------------~~~~~~~ 140 (257)
T 3gkz_A 88 LQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGG---------------------------GSGGGGS 140 (257)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC------------------------------------CTTCCC
T ss_pred EEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhccc---------------------------ccCCCcc
Confidence 9999999999999999999862 22233456666543110000 0000012
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEEC--CEEcc------------CCCcEEEEEEcCeEEEEEc
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEIL 266 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~i~ 266 (805)
+|.+...+... .+.+|++++|.|.+ .+.+.+ .+.|||. +..+. ...++..........|.|.
T Consensus 141 ~~~~~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 217 (257)
T 3gkz_A 141 QIVLTQSPAIM-SASPGEKVTLTCSA--SSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTIS 217 (257)
T ss_dssp CCCEECSCSEE-EECTTCCEEEEEEE--SSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred ceEEEcCCceE-EEeCCCcEEEEEEE--ccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEEC
Confidence 34455444433 48899999999998 566666 8999983 33221 1245555455567789999
Q ss_pred CCCCcccEEEEEEEEcCC
Q psy2166 267 GTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 267 ~~~~~d~G~Y~C~~~n~~ 284 (805)
+++.+|+|.|+|.+.+..
T Consensus 218 ~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 218 SMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp SCCGGGCEEEEEEECSSS
T ss_pred CCChHHCEEEEEEEccCC
Confidence 999999999999998754
No 237
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.75 E-value=1.2e-17 Score=167.28 Aligned_cols=195 Identities=15% Similarity=0.124 Sum_probs=126.3
Q ss_pred cccCCCeEEEEEEEeeCCCCCcEEEEEEC--CEEc-----------------cCCCceEEEee--CCEEEEEEccCCCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDPDLVVEWFYN--GKKL-----------------PHGHRYRTFHD--FGIVILDILYCYEEN 565 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p~~~v~W~~~--g~~l-----------------~~~~~~~~~~~--~~~~~L~i~~v~~~d 565 (805)
.+.+|++++|.|.+.+...+.+.+.|+|. +..+ ....|+.+..+ .+...|.|.+++.+|
T Consensus 12 ~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 91 (253)
T 3uzq_A 12 LVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSGD 91 (253)
T ss_dssp EECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCccc
Confidence 38899999999999842234779999982 2111 11246666543 346779999999999
Q ss_pred CEEEEEEEEcCCcceE-EEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEE
Q psy2166 566 SGVYECRATNKYGSDV-TKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 644 (805)
Q Consensus 566 ~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 644 (805)
+|.|.|.|.|..+... ..+.|.|...+. ...
T Consensus 92 sG~Y~C~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------~~~----- 123 (253)
T 3uzq_A 92 TAVYYCSRGWEGFAYWGQGTLVTVSAGGG-------------------------------------------GSG----- 123 (253)
T ss_dssp CEEEEEEECSSSCCEECCCEEEEECSSSC-------------------------------------------CCC-----
T ss_pred CEEEEEEEeeCCccEECCCcEEEEecCCc-------------------------------------------ccc-----
Confidence 9999999988543321 122222221110 000
Q ss_pred EEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCe
Q psy2166 645 RATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM 724 (805)
Q Consensus 645 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~ 724 (805)
+... ..+ ..+|.+...+... .+.+|++++|.|.+. +.|.+
T Consensus 124 ------~~~~----~~~---------------------------~~~~~v~~~p~~~-~v~~G~~v~L~C~~~--~~~~~ 163 (253)
T 3uzq_A 124 ------GGGS----GGG---------------------------GSELVMTQTPASL-AVSLGQRATISCRAS--ENVDR 163 (253)
T ss_dssp ------C----------------------------------------CCEEEECSEE-EECTTSCEEEEEEES--SCCEE
T ss_pred ------cccc----CCC---------------------------cccceEECcCCeE-EEeCCCCEEEEEEec--Ccccc
Confidence 0000 000 0345555566666 899999999999998 88887
Q ss_pred ----EEEEEEC--CEEcc------------CCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccE-EEEEEEEEE
Q psy2166 725 ----TVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA-EISVNLECV 785 (805)
Q Consensus 725 ----~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~ 785 (805)
.+.|+|+ |..+. ...++.....+....|+|.+++.+|+|.|.|.|.|..+.. ..-++|.|.
T Consensus 164 ~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 164 YGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred CCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 9999994 32211 1256666666777899999999999999999999976533 334567776
Q ss_pred EeCC
Q psy2166 786 VWSP 789 (805)
Q Consensus 786 ~~~~ 789 (805)
..++
T Consensus 244 ~~~~ 247 (253)
T 3uzq_A 244 RPLE 247 (253)
T ss_dssp CC--
T ss_pred CCCC
Confidence 5444
No 238
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.75 E-value=1.8e-17 Score=164.67 Aligned_cols=170 Identities=15% Similarity=0.133 Sum_probs=119.8
Q ss_pred CCCceecCCCcEEEEEEEecCCCC----CceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccC
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP----NLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDR 134 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p----~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~ 134 (805)
+..+.+.+|+.++|.|.+. +.| .+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (240)
T 1moe_A 8 PASLAVSLGQRATMSCRAG--ESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEAD 85 (240)
T ss_dssp CSEEEECTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEecCCCCEEEEEeCC--CccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChh
Confidence 4467899999999999998 566 7899999952 211 1245888877777889999999999
Q ss_pred CCeEEEEEEEeCCee-EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccc
Q psy2166 135 DQGIYTCRAWNLAGE-TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLS 213 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 213 (805)
|+|.|+|.|.|..+. ......|.|...+.. ..++.+...+...
T Consensus 86 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~-----------------------------------~~~~~~~~~~~~~- 129 (240)
T 1moe_A 86 DVATYYCQQTNEDPYTFGGGTKLEIKGGGSG-----------------------------------GGGEVQLQQSGAE- 129 (240)
T ss_dssp GCEEEEEEECSSSSCCBCCCEEEEECCCSCC-----------------------------------CCCCCEEEECCCE-
T ss_pred hCEEEEEEEccCCceeecCCEEEEEecCCCC-----------------------------------CCceEEEeCCCce-
Confidence 999999999997554 233456776543210 0122233333333
Q ss_pred ccCCCceEEEEEEEeeCCCC--CeEEEEEEC--CEEcc-----------------CCCcEEEEEE--cCeEEEEEcCCCC
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ--TMTVEFLYN--GKPIE-----------------ASHRIRTVHA--FGMVVLEILGTKI 270 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p--~~~i~W~k~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~ 270 (805)
.+.+|+.++|.|.+ .+.| .+.+.|+|+ |..+. ...++..... .....|.|.+++.
T Consensus 130 ~v~~G~~v~L~C~~--~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 207 (240)
T 1moe_A 130 LVEPGASVKLSCTA--SGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTS 207 (240)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEeCCCcEEEEEEE--cCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCH
Confidence 47899999999998 4554 469999995 32221 1234444333 3457899999999
Q ss_pred cccEEEEEEEEc
Q psy2166 271 EDTGVYTCRATN 282 (805)
Q Consensus 271 ~d~G~Y~C~~~n 282 (805)
+|+|.|+|.|.+
T Consensus 208 ~D~G~Y~C~a~~ 219 (240)
T 1moe_A 208 EDTAVYYCAPFG 219 (240)
T ss_dssp GGCEEEEEEECS
T ss_pred HHCEEEEEEEEe
Confidence 999999999984
No 239
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.74 E-value=3.2e-18 Score=167.77 Aligned_cols=181 Identities=18% Similarity=0.232 Sum_probs=122.7
Q ss_pred CceecCCCcEEEEEEEecCCC---CCceEEEEECCEec-------------CCCCceEEEec---CcEEEEEEcccccCC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKND---PNLKIEWIFNGKPL-------------ELGSRFKTTAD---FGFVTLDLTEVYDRD 135 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~---p~~~v~W~k~g~~i-------------~~~~~~~~~~~---~~~~~L~I~~~~~~D 135 (805)
.+.+.+|+.++|.|.+.+... ..+.|.|+|++... ....|+.+..+ .+..+|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 467899999999999883211 23789999987433 12345544331 124579999999999
Q ss_pred CeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 136 QGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 136 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
+|.|+|.+.+.. .......|.|..+ ..+|.+...+.. .+
T Consensus 84 ~G~Y~C~~~~~~-~~~~~~~l~V~~~--------------------------------------~~~p~i~~~~~~--~v 122 (222)
T 4i0k_A 84 EGSYTCFVSIQD-FDSAAVSLQVAAP--------------------------------------YSKPSMTLEPNK--DL 122 (222)
T ss_dssp CSCEEEEEEECC-CCCCCCCCCCCBC--------------------------------------CCCCEEECCC------
T ss_pred CEEEEEEEEeCC-CceEEEEEEEEcC--------------------------------------CCCCcEEeCCCc--ee
Confidence 999999999852 2233333333321 123555544332 37
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEE-CCEEccCCCcEEEEEE-cC-eEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEE
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLY-NGKPIEASHRIRTVHA-FG-MVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 292 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k-~g~~l~~~~~~~~~~~-~~-~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 292 (805)
.+|+.++|.|.+. .+.|.+.+.|++ ++..+........... .+ ...|.|.+++.+|+|.|+|.|.|..|....++.
T Consensus 123 ~~G~~~~l~C~~~-~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 201 (222)
T 4i0k_A 123 RPGNMVTITCSSY-QGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGS 201 (222)
T ss_dssp -CCSEEEEEEEEE-EEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEE
T ss_pred cCCceEEEEEecc-cccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEE
Confidence 7899999999984 377889999999 5665544332222221 22 346889999999999999999999999999999
Q ss_pred EEEec
Q psy2166 293 LECVD 297 (805)
Q Consensus 293 l~v~~ 297 (805)
|.|..
T Consensus 202 l~V~~ 206 (222)
T 4i0k_A 202 VTITG 206 (222)
T ss_dssp EECCC
T ss_pred EEEeC
Confidence 98874
No 240
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.74 E-value=1e-17 Score=161.33 Aligned_cols=174 Identities=12% Similarity=0.154 Sum_probs=118.2
Q ss_pred CceecCCCcEEEEEEEecC--CCCCceEEEEECCEecC------------CCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPK--NDPNLKIEWIFNGKPLE------------LGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~--~~p~~~v~W~k~g~~i~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
.+.+.+|++++|.|.+... +.|.+.+.|+|++..+. ...|..+... +..+|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~-~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDIT-NNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEEST-TTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccC-CCcEEEEecccchhCeEEE
Confidence 4678999999999998632 23677999999998763 1123333222 2348999999999999999
Q ss_pred EEEEeCCeeE-----EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 141 CRAWNLAGET-----FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 141 C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
|.|.|..|.. .....|.|..+. ..|.+... ..
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~~~~~-----~~ 118 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADF--------------------------------------PTPSISDF-----EI 118 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCC--------------------------------------CCCEEEEE-----EC
T ss_pred EEEEcCCCCccccccccEEEEEEcCCC--------------------------------------CCCceEec-----cC
Confidence 9999976543 335556554321 12333321 13
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEc-CeEEE-EEcCCCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF-GMVVL-EILGTKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~-~~~~L-~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
..|+.++|.|.+. .+.|.|.|.|+|+|..+............ +...+ .+..+..+|.|.|+|.|.|..+..+..+++
T Consensus 119 ~~g~~~~l~C~~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 119 PTSNIRRIICSTS-GGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp SSTTEEEEEEEEE-EESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCCeEEEEEecC-CccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 4688999999983 37899999999999988754332222222 22122 233445689999999999999887776654
No 241
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.74 E-value=1.9e-17 Score=155.09 Aligned_cols=157 Identities=15% Similarity=0.178 Sum_probs=115.4
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEE--CCEec----------CCCCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIF--NGKPL----------ELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k--~g~~i----------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
.+...+|++|+|.|.....+.+.+.|.|+| ++..| ..+.|+.+..++ +|.|.+++.+|+|.|+|.
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c~ 84 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKVS 84 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEEE
Confidence 467789999999995432235678999999 98877 356788887655 799999999999999999
Q ss_pred EEeCCeeEEE--EEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCce
Q psy2166 143 AWNLAGETFT--STTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI 220 (805)
Q Consensus 143 a~n~~g~~~~--~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~ 220 (805)
|.|..|.... ...|.|..+. .+|.+.. .+..
T Consensus 85 ~~n~~g~~~~~~~~~L~V~~~~--------------------------------------~~P~i~~---------~~~~ 117 (182)
T 1hnf_A 85 IYDTKGKNVLEKIFDLKIQERV--------------------------------------SKPKISW---------TCIN 117 (182)
T ss_dssp EEETTSCEEEEEEEEEEEECCC--------------------------------------CCCEEEE---------ETTT
T ss_pred EEeCCCceeEEEEEEEEEcCcC--------------------------------------CCCEEEE---------ccCc
Confidence 9998876543 4556665321 2344433 1235
Q ss_pred EEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEE
Q psy2166 221 AHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 294 (805)
Q Consensus 221 ~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~ 294 (805)
++|.|.+ .+.|.+.|.|+++|..+. . ... .|.+.. ..+|+|.|+|.|.|..+..+....+.
T Consensus 118 v~L~C~~--~~~p~~~~~W~~~g~~l~-~-------~~~--~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 118 TTLTCEV--MNGTDPELNLYQDGKHLK-L-------SQR--VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp TEEEEEC--SSCSSCEEEEEESSCEEE-E-------ESS--CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEeEc--cCCCCCEEEEEECCEECC-C-------CCc--EEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 8999988 677789999999998871 1 111 233333 57899999999999998887766654
No 242
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.74 E-value=4.3e-17 Score=165.42 Aligned_cols=185 Identities=14% Similarity=0.121 Sum_probs=121.7
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCE-----ec---------CCCCceEEEecCcEEEEEEccc
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGK-----PL---------ELGSRFKTTADFGFVTLDLTEV 131 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~-----~i---------~~~~~~~~~~~~~~~~L~I~~~ 131 (805)
+.+... +..+.+.+|+.++|.|.+. +.|.+.|.|+|++. .+ ....|+.+..+++..+|.|.++
T Consensus 13 ~~v~~~-p~~~~v~~G~~v~L~C~~~--~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 89 (276)
T 3auv_A 13 IQMTQS-PSSLSASVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSL 89 (276)
T ss_dssp CCEEEE-CSEEECCTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred eeEEeC-CCeEEEcCCCCEEEEeEcC--CCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccC
Confidence 344433 4467899999999999998 57788999999641 12 1245888877777889999999
Q ss_pred ccCCCeEEEEEEEeCCee-EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 132 YDRDQGIYTCRAWNLAGE-TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
+.+|+|.|+|.+.|..+. ......|.|...+..... .......|+.+...+.
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~---------------------------~~~~~~~p~~~~~~p~ 142 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIE---------------------------GRSGGGGSEVQLVESG 142 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC--------------------------------------------CCEEEEEC
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCCCcccc---------------------------ccccccCcceEEECCC
Confidence 999999999999987543 222345666543210000 0000001222233333
Q ss_pred cccccCCCceEEEEEEEeeCCCC--CeEEEEEECC--EEc-----------------cCCCcEEEEEE--cCeEEEEEcC
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQ--TMTVEFLYNG--KPI-----------------EASHRIRTVHA--FGMVVLEILG 267 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p--~~~i~W~k~g--~~l-----------------~~~~~~~~~~~--~~~~~L~i~~ 267 (805)
.. .+.+|++++|.|.+ .+.+ .+.+.|||++ ..+ ....++..... .+...|.|.+
T Consensus 143 ~~-~v~~G~~v~L~C~~--~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 219 (276)
T 3auv_A 143 GG-LVQPGGSLRLSCAA--SGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNS 219 (276)
T ss_dssp CE-EECTTCCEEEEEEE--ESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ce-EecCCCeEEEEEEe--cCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECC
Confidence 33 58899999999998 4444 5899999963 211 01245554443 3457899999
Q ss_pred CCCcccEEEEEEEEcC
Q psy2166 268 TKIEDTGVYTCRATNK 283 (805)
Q Consensus 268 ~~~~d~G~Y~C~~~n~ 283 (805)
++.+|+|.|+|.+.|.
T Consensus 220 v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 220 LRAEDTAVYYCARFVF 235 (276)
T ss_dssp CCGGGCEEEEEEEECS
T ss_pred CChhHCEEEEEEEEcC
Confidence 9999999999999997
No 243
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.74 E-value=2.7e-17 Score=160.00 Aligned_cols=170 Identities=18% Similarity=0.244 Sum_probs=121.2
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+. +.|.+.+.|+|.+ ... ....++.+........|.|.+++.+|+|.|+|.|
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 90 (213)
T 3r06_A 13 ASLGDRVTINCQAS--QDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQ 90 (213)
T ss_dssp ECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEE
T ss_pred ecCCCcEEEEEEeC--CCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEec
Confidence 88999999999998 6688999999832 110 1245677666667788999999999999999999
Q ss_pred EeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..+... ....|.|..
T Consensus 91 ~~~~~~~~~~~~~l~V~~-------------------------------------------------------------- 108 (213)
T 3r06_A 91 YYNYPWTFGPGTKLEIKR-------------------------------------------------------------- 108 (213)
T ss_dssp CSSSSCEECCCEEEEECC--------------------------------------------------------------
T ss_pred ccCCceEEcCCceEEEec--------------------------------------------------------------
Confidence 98764332 234555421
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEcc
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLP 540 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~ 540 (805)
...+|.+....+... +..|+.++|.|.+.+...|.+.++|+|||..+.
T Consensus 109 -------------------------------~~~~p~v~~~~~~~~-~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 156 (213)
T 3r06_A 109 -------------------------------ADAKPTVSIFPPSSE-QLGTGSATLVCFVNNFYPKDINVKWKVDGSEKR 156 (213)
T ss_dssp -------------------------------CCBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred -------------------------------cCCCceeeeeCCCce-ecCCCCcEEEEEEeeecCCceEEEEEECCcccC
Confidence 135677776655554 567888999999996333357999999999987
Q ss_pred CCC--ceEEE--eeCC---EEEEEEccCCCCCCEEEEEEEEcCCcceE
Q psy2166 541 HGH--RYRTF--HDFG---IVILDILYCYEENSGVYECRATNKYGSDV 581 (805)
Q Consensus 541 ~~~--~~~~~--~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 581 (805)
.+. ..... .++. .+.|.|.....+|+|.|+|.|.|......
T Consensus 157 ~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~ 204 (213)
T 3r06_A 157 DGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAA 204 (213)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSC
T ss_pred CceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcc
Confidence 541 11111 1111 23588888888899999999999865533
No 244
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.74 E-value=2.4e-17 Score=163.42 Aligned_cols=175 Identities=13% Similarity=0.097 Sum_probs=123.9
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--E------------ecCCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--K------------PLELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~------------~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|++++|.|.+. +.+.+.|.|+|++ . ......|+.+...++..+|.|.+++.+|+|.
T Consensus 31 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 108 (237)
T 3sob_L 31 PSSLSASVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFAT 108 (237)
T ss_dssp CSEEEEETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CCeEEEeCCCcEEEEEecC--CCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeE
Confidence 3367899999999999998 5678899999932 1 1123468888777778899999999999999
Q ss_pred EEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 139 YTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 139 Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|+|.+.+..+.. .....+.|.... .+|.+........ +.+
T Consensus 109 Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~p~v~~~~~~~~-~~~ 149 (237)
T 3sob_L 109 YYCQQSYTTPPTFGQGTKVEIKRTV--------------------------------------AAPSVFIFPPSDE-QLK 149 (237)
T ss_dssp EEEEECSSSSCEECCCEEEEEECCC--------------------------------------BCCEEEEECCCHH-HHH
T ss_pred EEEeeccCCceEEcCcEEEEEecCC--------------------------------------CCCceEEeCCChh-hcc
Confidence 999998876432 223456664311 3465555443332 446
Q ss_pred CceEEEEEEEeeCCCC-CeEEEEEECCEEccCCC-cEE-EEE-EcC----eEEEEEcCCCCcccEEEEEEEEcCCeeEEE
Q psy2166 218 GEIAHFEASLIPVGDQ-TMTVEFLYNGKPIEASH-RIR-TVH-AFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEI 289 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p-~~~i~W~k~g~~l~~~~-~~~-~~~-~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~ 289 (805)
|+.++|.|.+.. +.| .+.+.|+|+|..+.... ... ... .++ ...|.|.....+|+|.|+|.|.|.......
T Consensus 150 g~~v~l~C~~~~-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 228 (237)
T 3sob_L 150 SGTASVVCLLNN-FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 228 (237)
T ss_dssp HTEEEEEEEEEE-EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred CCceEEEEEEcc-cCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCce
Confidence 889999999853 245 68999999999887532 100 000 111 356889999999999999999998754433
No 245
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.74 E-value=5.5e-17 Score=162.18 Aligned_cols=185 Identities=14% Similarity=0.137 Sum_probs=119.2
Q ss_pred cCCCCceecCCCcEEEEEEEecCCCCCceEEEEECC-----E---------ecCCCCceEEEecCcEEEEEEcccccCCC
Q psy2166 71 PLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG-----K---------PLELGSRFKTTADFGFVTLDLTEVYDRDQ 136 (805)
Q Consensus 71 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g-----~---------~i~~~~~~~~~~~~~~~~L~I~~~~~~D~ 136 (805)
..+..+.+.+|+.++|.|.+. +.|.+.+.|+|+. . ......|+.+...+..++|.|.+++.+|+
T Consensus 9 ~~p~~~~v~~G~~v~L~C~~~--~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 86 (250)
T 3esu_F 9 QSTSSLSASLGDRVTISCRAS--QDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDI 86 (250)
T ss_dssp CSCSEEEECTTCCEEEEEEES--SCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred ecCCEEEeeCCCcEEEEEEec--ccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhC
Confidence 344467899999999999998 6777899999943 1 11224588777777888999999999999
Q ss_pred eEEEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 137 GIYTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 137 G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
|.|.|.+.|..+... ....|.|...+.......... .......++.+...+... .+
T Consensus 87 G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~-~v 143 (250)
T 3esu_F 87 GTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGG----------------------GGSGGGGSEVQLQQSGPE-LV 143 (250)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC----------------------------------------------CEECCCE-EE
T ss_pred EEEEEEEeeCCCceECCCEEEEEECCCCccccccccc----------------------ccccCcccceEEecCCce-EE
Confidence 999999998755432 234566654211000000000 000000122222233333 47
Q ss_pred CCCceEEEEEEEeeCCCC--CeEEEEEEC--CEEcc-----------------CCCcEEEEEE--cCeEEEEEcCCCCcc
Q psy2166 216 SEGEIAHFEASLIPVGDQ--TMTVEFLYN--GKPIE-----------------ASHRIRTVHA--FGMVVLEILGTKIED 272 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p--~~~i~W~k~--g~~l~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d 272 (805)
.+|+.++|.|.+ .+.+ .+.+.|||+ +..+. ...++..... ....+|.|.+++.+|
T Consensus 144 ~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 221 (250)
T 3esu_F 144 KPGASVKISCKD--SGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVD 221 (250)
T ss_dssp CTTCCEEEEEEC--CSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCceEEEEEEe--cCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCccc
Confidence 899999999998 4545 789999997 43321 1244544433 346789999999999
Q ss_pred cEEEEEEEEc
Q psy2166 273 TGVYTCRATN 282 (805)
Q Consensus 273 ~G~Y~C~~~n 282 (805)
+|.|+|.+.+
T Consensus 222 sG~Y~C~~~~ 231 (250)
T 3esu_F 222 SAVYFCARSG 231 (250)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999997
No 246
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.74 E-value=2.7e-17 Score=164.66 Aligned_cols=196 Identities=16% Similarity=0.154 Sum_probs=126.6
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
+..+.+.+|+.|+|.|.+.+...+.+.|.|+|. +..+ ....|+.+..+ .+.++|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 87 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSL 87 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCC
Confidence 336789999999999999842234679999992 2111 12357777654 34778999999
Q ss_pred ccCCCeEEEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 132 YDRDQGIYTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
+.+|+|.|+|.+.|..+... ....|.|........... ......+|.+...+.
T Consensus 88 ~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~--------------------------~~~~~~~~~v~~~p~ 141 (253)
T 3uzq_A 88 TSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGG--------------------------SGGGGSELVMTQTPA 141 (253)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC-----------------------------------CCEEEECS
T ss_pred CcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccc--------------------------cCCCcccceEECcCC
Confidence 99999999999998655432 345566653210000000 000012355555554
Q ss_pred cccccCCCceEEEEEEEeeCCCCCe----EEEEEEC--CEEcc------------CCCcEEEEEEcCeEEEEEcCCCCcc
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQTM----TVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILGTKIED 272 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p~~----~i~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d 272 (805)
.. .+.+|++++|.|.+ .+.+.+ .+.|||+ +..+. ...++..........|.|.+++.+|
T Consensus 142 ~~-~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 218 (253)
T 3uzq_A 142 SL-AVSLGQRATISCRA--SENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADD 218 (253)
T ss_dssp EE-EECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eE-EEeCCCCEEEEEEe--cCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHH
Confidence 44 48899999999998 566665 8999994 22211 1245555455567789999999999
Q ss_pred cEEEEEEEEcCCeeE-EEEEEEEEec
Q psy2166 273 TGVYTCRATNKWGQA-EISVNLECVD 297 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~-~~~~~l~v~~ 297 (805)
+|.|+|.+.|..+.. .....|.|..
T Consensus 219 sG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 219 VATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp CEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred CEEEEEEEccCCCcEECCCEEEEEcC
Confidence 999999999865332 2234455543
No 247
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.74 E-value=5.2e-17 Score=157.99 Aligned_cols=171 Identities=12% Similarity=0.124 Sum_probs=120.8
Q ss_pred eecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECC--EEc------------cCCCcEEEEEEcCeEEEEEcCCCC
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--KPI------------EASHRIRTVHAFGMVVLEILGTKI 270 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~i~~~~~ 270 (805)
+...+... .+.+|+.++|.|.+ .+.|.+.+.|||++ ..+ ....++......+...|.|.+++.
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 4 MTQTPASV-SEPVGGTVTIKCQA--SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp EEEECSEE-EEETTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred EEeCCCeE-EEcCCCCEEEEEEe--cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 33333333 47899999999998 67788999999942 111 013566666666778999999999
Q ss_pred cccEEEEEEEEcCCe---eEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEc
Q psy2166 271 EDTGVYTCRATNKWG---QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 347 (805)
Q Consensus 271 ~d~G~Y~C~~~n~~g---~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l 347 (805)
+|+|.|+|.+.|..+ .......+.|.. ...+|.+........ +.+|+.++|.|.+.+ +.|.+.|.|+++|..+
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~--~~~~p~v~~~~~~~~-~~~g~~v~l~C~~~g-~~P~~~v~W~k~g~~~ 156 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKG--DPVAPTVLIFPPSAD-LVATGTVTIVCVANK-YFPDVTVTWEVDGTTQ 156 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEEC--CCBCCEEEEECCCHH-HHTTSEEEEEEEEEE-EBSCCEEEEEETTEEC
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeC--CCcCCeEEEeCCchh-hccCCcEeEEEEEec-ccCCcEEEEEeCCccC
Confidence 999999999998765 333344555543 225666665444443 667999999999984 3788999999999988
Q ss_pred cCCCceEE--E-EeC----cEEEEEEcccCcCCceEEEEEEE
Q psy2166 348 FHKNRVKM--V-SDF----GFVVMDIAYVQSHDSGEYVCRAW 382 (805)
Q Consensus 348 ~~~~~~~~--~-~~~----~~~~l~i~~v~~~d~G~Y~C~a~ 382 (805)
........ . ..+ ....|.|..+..+|+|.|+|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 157 TTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 64210000 0 000 11359999999999999999998
No 248
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.74 E-value=9.7e-19 Score=170.14 Aligned_cols=173 Identities=13% Similarity=0.109 Sum_probs=120.3
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecC------------CCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLE------------LGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|+.++|.|.+. +.|.+.|.|+|+ |..+. ...|+.+...++..+|.|.+++.+|+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 83 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGD--QLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAA 83 (212)
T ss_dssp CSEEEEETTSCCCEEEEET--TGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSE
T ss_pred CCeEEEeCCCcEEEEEecC--CCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEE
Confidence 4467899999999999987 566678999985 33321 1468887777778899999999999999
Q ss_pred EEEEEEeC-CeeE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccccccc
Q psy2166 139 YTCRAWNL-AGET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNL 215 (805)
Q Consensus 139 Y~C~a~n~-~g~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v 215 (805)
|+|.|.|. .+.. .....|.|...+ ..+|.+....... .+
T Consensus 84 Y~C~~~n~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~p~v~~~~~~~-~~ 125 (212)
T 1nfd_E 84 YYCLSSYGDNNDLVFGSGTQLTVLRGP-------------------------------------KSSPKVTVFPPSP-EE 125 (212)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEECCC-------------------------------------CBCCEEECCCCCH-HH
T ss_pred EEEEEEcccCcccccCCceEEEEccCC-------------------------------------CCCCEEEeeCCch-Hh
Confidence 99999973 2211 223445554321 1345555433332 24
Q ss_pred CCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEE--EcC---eEEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 216 SEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVH--AFG---MVVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~~--~~~---~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
.+|+.++|.|.+.. ..|. +.|.|+|+|..+.......... .++ .+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 126 ~~g~~v~L~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 126 LRTNKATLVCLVND-FYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp HHTTEECCCEEEEE-EBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred ccCCceEEEEEEEe-eECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 57999999999853 2244 8999999999886542211000 111 245899999999999999999998765
No 249
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.74 E-value=1.2e-17 Score=163.18 Aligned_cols=180 Identities=11% Similarity=0.114 Sum_probs=119.1
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecC-----------------CCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLE-----------------LGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~-----------------~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
+..+.+.+|+.++|.|.+.+...+.+.|.|+|+ |..+. ...|+.+..+ ++..+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 336789999999999999842223689999997 33221 1357777654 35678999999
Q ss_pred ccCCCeEEEEEEEeCCee----EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 132 YDRDQGIYTCRAWNLAGE----TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
+.+|+|.|+|.+.|..+. ....+.|.|...+ ..+|.+..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~ 129 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK-------------------------------------TTPPSVYP 129 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC-------------------------------------CBCCEEEE
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCC-------------------------------------CCCCeEEE
Confidence 999999999999997631 1234566665421 12344443
Q ss_pred ccccccccCCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEEEEEc---CeEEEEEcCCCCcccEEEEEEEEc
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVG-DQTM-TVEFLYNGKPIEASHRIRTVHAF---GMVVLEILGTKIEDTGVYTCRATN 282 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~-~p~~-~i~W~k~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n 282 (805)
..+.. .+.+|+.++|.|.+. + .|.| .|.|+|+|..+...........+ ....|.|..... |.|.|+|.|.|
T Consensus 130 ~~~~~-~~~~g~~v~L~C~~~--g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n 205 (219)
T 1c1e_H 130 LAPGS-AAQTNSMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAH 205 (219)
T ss_dssp ECCCS-SSCCSSEEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEE
T ss_pred ecCcc-ccccCCeEEEEEEcc--cccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEe
Confidence 33222 367899999999984 5 7777 99999999865311000000111 124688854444 66999999999
Q ss_pred CCeeEEEEEEE
Q psy2166 283 KWGQAEISVNL 293 (805)
Q Consensus 283 ~~g~~~~~~~l 293 (805)
..+.......+
T Consensus 206 ~~~~~~~~~~i 216 (219)
T 1c1e_H 206 PASSTKVDKKI 216 (219)
T ss_dssp GGGTEEEEEEC
T ss_pred CCCCccEEEec
Confidence 88776555443
No 250
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.74 E-value=4.1e-17 Score=162.93 Aligned_cols=134 Identities=13% Similarity=0.097 Sum_probs=88.8
Q ss_pred EEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q psy2166 627 VILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 706 (805)
Q Consensus 627 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 706 (805)
..|.|.+++.+|+|.|+|.|.|..+.....+.|.|.. +|.+...+.. .+..
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~---------------------------~P~v~~~~~~--~~~~ 132 (248)
T 3pv7_A 82 ASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVA---------------------------SPASRLLLDQ--VGMK 132 (248)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB---------------------------CCEEEEECC-------
T ss_pred EEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEec---------------------------CCceEEecCC--cccc
Confidence 3499999999999999999999999888888999984 5555555443 3567
Q ss_pred CCeEEEEEEEeecC-CCCe-EEEEEECCEEccCCCC-------eEE-EeeCc----EEEEEEcCCCCCCCEEEEEEEEcC
Q psy2166 707 GEIAHFEASLIPVG-DQTM-TVEFLYNGKPIEASHR-------IRT-VHAFG----MVVLEILGTKIEDTGVYTCRATNK 772 (805)
Q Consensus 707 G~~~~l~C~~~~~g-~p~~-~v~W~~~g~~l~~~~~-------~~~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~ 772 (805)
|+.+.|.|.+. | .|.| .|+|+|+|+.+..... ... ....+ ...|.|..+..+|+|.|+|.|.|.
T Consensus 133 ~~~~~L~C~~~--g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~ 210 (248)
T 3pv7_A 133 ENEDKYMCESS--GFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHA 210 (248)
T ss_dssp ---CEEEEEEE--EEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECT
T ss_pred CCCcEEEEEEc--cEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECC
Confidence 88889999998 6 7888 9999999965432210 011 11111 246999999999999999999999
Q ss_pred CccEEEEEEEEEEEeCCCc
Q psy2166 773 WGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 773 ~G~~~~~~~l~V~~~~~~~ 791 (805)
.|....+..+.+.+..|+.
T Consensus 211 ~~~~~~~~~v~l~V~~p~~ 229 (248)
T 3pv7_A 211 SLHTPLRSNFTLTAARHSL 229 (248)
T ss_dssp TCSSCEEEEECC-------
T ss_pred CCCCCcEEEEEEEEcCCCC
Confidence 9975554444444454443
No 251
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.74 E-value=4.3e-17 Score=165.89 Aligned_cols=195 Identities=16% Similarity=0.175 Sum_probs=126.8
Q ss_pred cccCCCeEEEEEEEeeCCCCCcEEEEEECC--EEcc-----------------CCCceEEEee--CCEEEEEEccCCCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDPDLVVEWFYNG--KKLP-----------------HGHRYRTFHD--FGIVILDILYCYEEN 565 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v~~~d 565 (805)
.+.+|++++|.|.+.+...+.+.+.|+|++ ..+. ...|+.+..+ ++...|.|.+++.+|
T Consensus 37 ~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 116 (282)
T 1qok_A 37 LVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSED 116 (282)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChhh
Confidence 489999999999998321136799999853 1110 1246666543 356789999999999
Q ss_pred CEEEEEEEEcCCcce---E--EEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcE
Q psy2166 566 SGVYECRATNKYGSD---V--TKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSG 640 (805)
Q Consensus 566 ~G~Y~C~a~n~~g~~---~--~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G 640 (805)
+|.|.|.+.|..|.. . ..+.|.|...+.. .| .+
T Consensus 117 sG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~-----~~-------------------------------------~~ 154 (282)
T 1qok_A 117 TAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGG-----SG-------------------------------------GG 154 (282)
T ss_dssp CEEEEEEEECSSSSCCCEEECCCEEEEEEC--------------------------------------------------
T ss_pred CEEEEEEeccCCCccceeeeCCCEEEEEecCCcc-----cC-------------------------------------Cc
Confidence 999999999987621 0 1123333222110 00 00
Q ss_pred EEEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecC
Q psy2166 641 VYECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVG 720 (805)
Q Consensus 641 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g 720 (805)
.. . - ...+|.+...+.+. .+.+|++++|.|.+. +
T Consensus 155 ~~-----------~------~--------------------------~~~~~~~~~~p~~~-~v~~G~~v~L~C~~~--~ 188 (282)
T 1qok_A 155 GS-----------G------G--------------------------GGSENVLTQSPAIM-SASPGEKVTITCSAS--S 188 (282)
T ss_dssp --------------------------------------------------CCCEEEECSEE-EECTTCCEEEEEEES--S
T ss_pred cC-----------C------C--------------------------CccceEEecCCCEE-EEcCCCcEEEEEEec--C
Confidence 00 0 0 00244555555566 899999999999998 8
Q ss_pred CCCeEEEEEE--CCEEcc------------CCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCc-cEEEEEEEEEE
Q psy2166 721 DQTMTVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG-QAEISVNLECV 785 (805)
Q Consensus 721 ~p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~ 785 (805)
.| +.|.|+| +|+.+. ...++.+..+.....|+|.+++.+|+|.|+|.|.|..+ .-...+.|+|.
T Consensus 189 ~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 189 SV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp CC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 88 8999999 665441 24567666666778999999999999999999998654 23345678886
Q ss_pred EeCCC
Q psy2166 786 VWSPS 790 (805)
Q Consensus 786 ~~~~~ 790 (805)
...+.
T Consensus 268 ~~~~~ 272 (282)
T 1qok_A 268 RAAAE 272 (282)
T ss_dssp -----
T ss_pred ccccc
Confidence 54433
No 252
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.73 E-value=9.6e-18 Score=164.60 Aligned_cols=129 Identities=13% Similarity=0.112 Sum_probs=93.4
Q ss_pred EEEeccCCCCCcEEEEEEEEeCCcceEEEE-EEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q psy2166 628 ILDILYCYEENSGVYECRATNKYGSDVTKA-SLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 706 (805)
Q Consensus 628 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 706 (805)
.|.|.+++.+|+|.|+|.|.|..|...... .+.+. .+|.+...+... ....
T Consensus 84 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~-~~~~ 135 (225)
T 4fmk_A 84 TLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI---------------------------AQPENHAEAQEV-TIGP 135 (225)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE---------------------------BCCEEEEEECCB-CCSS
T ss_pred EEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeee---------------------------cCCceeecccce-eecc
Confidence 499999999999999999999877665544 34443 345555555555 6777
Q ss_pred CCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCc---EEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEE
Q psy2166 707 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 783 (805)
Q Consensus 707 G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 783 (805)
++.+.+.|.+. .+.|++.+.|++++..+..........++. ...|.|.+++.+|+|.|+|.|.|.+|....++.++
T Consensus 136 ~~~~~~~c~~~-~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 136 QSVAVARCVST-GGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVT 214 (225)
T ss_dssp SCEEEEEEEEE-EEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEE
T ss_pred eeeeeeeeeec-CCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEE
Confidence 88888888876 378999999999886554332222122222 24699999999999999999999999776655555
Q ss_pred EE
Q psy2166 784 CV 785 (805)
Q Consensus 784 V~ 785 (805)
|.
T Consensus 215 l~ 216 (225)
T 4fmk_A 215 LS 216 (225)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 253
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.73 E-value=1.3e-17 Score=166.88 Aligned_cols=173 Identities=16% Similarity=0.162 Sum_probs=120.8
Q ss_pred CCCceecCCCcEEEEEEEecCCCC-----CceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEccccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP-----NLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p-----~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~ 133 (805)
+..+.+.+|++++|.|.+. +.+ .+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.
T Consensus 41 p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 118 (252)
T 3bkj_L 41 PLSLPVNLGEQASISCRSS--QSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEA 118 (252)
T ss_dssp CSEEEECTTSCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CceEEEeCCCcEEEEEEcC--CCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCc
Confidence 3467899999999999998 455 5899999964 111 123578877777788999999999
Q ss_pred CCCeEEEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccc
Q psy2166 134 RDQGIYTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHL 212 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 212 (805)
+|+|.|+|.+.|..+... ....|.|.... .+|.+.......
T Consensus 119 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~--------------------------------------~~P~v~~~~~~~ 160 (252)
T 3bkj_L 119 EDLGVYYCFQASLVPLTFGAGTKLELKRAD--------------------------------------AAPTVSIFPPSS 160 (252)
T ss_dssp GGCEEEEEEECSBSSCEECCCEEEEECCCC--------------------------------------BCCEEEEECCCH
T ss_pred ccCEEEEEEEEcCCccEECCCEEEEEeCCC--------------------------------------cCcEEEEeCCCh
Confidence 999999999988754322 22456664311 245555433332
Q ss_pred cccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEE-E--EEcC----eEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 213 SNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRT-V--HAFG----MVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 213 ~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~-~--~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
. +.+|+.++|.|.+.. ..|. ++|.|+|+|..+........ . ..++ .+.|.|.++..+|+|.|+|.|.|..
T Consensus 161 ~-~~~g~~v~L~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 238 (252)
T 3bkj_L 161 E-QLTSGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 238 (252)
T ss_dssp H-HHHHTEEEEEEEEEE-EBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTT
T ss_pred h-hcCCCcEEEEEEEee-EeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCC
Confidence 2 347899999999853 2444 48999999998865411110 0 1111 2469999999999999999999976
Q ss_pred eeE
Q psy2166 285 GQA 287 (805)
Q Consensus 285 g~~ 287 (805)
...
T Consensus 239 ~~~ 241 (252)
T 3bkj_L 239 STS 241 (252)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 254
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.73 E-value=6.4e-17 Score=155.56 Aligned_cols=171 Identities=10% Similarity=0.076 Sum_probs=117.4
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-EcCeEEEEEcCCCCcccEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCR 279 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~ 279 (805)
.+|.|...+. ..+.+|++++|.|.+ . .+.+.+.|+|+|..+.......... ......|.|.+++.+|+|.|+|.
T Consensus 7 ~~P~i~~~p~--~~v~~G~~v~L~C~~--~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 7 RKPSLLAHPG--PLVKSEETVILQCWS--D-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEEE--S-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEEEcC--CccCCCCcEEEEEec--c-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEe
Confidence 4577776665 347899999999998 3 3667999999997654221110001 12346899999999999999999
Q ss_pred EEcCCe-----eEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceE
Q psy2166 280 ATNKWG-----QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 354 (805)
Q Consensus 280 ~~n~~g-----~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~ 354 (805)
+.+... ..+..+.|.|.... .+|.+...+.. .+.+|+.++|.|.+. + +.+.+.|+|+|..+.......
T Consensus 82 a~~~~~~~~~~~~s~~~~l~V~~~~--~~p~i~~~p~~--~v~~G~~v~L~C~~~--~-~~~~~~w~k~g~~~~~~~~~~ 154 (201)
T 1nkr_A 82 GSVTHSPYQVSAPSDPLDIVIIGLY--EKPSLSAQPGP--TVLAGENVTLSCSSR--S-SYDMYHLSREGEAHERRLPAG 154 (201)
T ss_dssp EEBTTBTTCCCCCCCCEEEEEECSS--CCCEEEEESCS--EECTTCEEEEEEEES--S-CCSEEEEEETTCSSCEEEECE
T ss_pred EecCCCCccccCCCCCEEEEeeccC--CCCceecCCCC--ccCCCCeEEEEEeCC--C-CCceEEEEECCcccCcccccc
Confidence 986431 22344566665432 45666655542 388999999999985 3 567899999998775322111
Q ss_pred EEEeC-cEEEEEEcccCcCCceEEEEEEEeCc
Q psy2166 355 MVSDF-GFVVMDIAYVQSHDSGEYVCRAWNKY 385 (805)
Q Consensus 355 ~~~~~-~~~~l~i~~v~~~d~G~Y~C~a~n~~ 385 (805)
....+ ....|.|.+++ |+|.|+|.|.+..
T Consensus 155 ~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 155 PKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred cccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 11111 14579999998 9999999998764
No 255
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.73 E-value=5.5e-17 Score=162.76 Aligned_cols=194 Identities=16% Similarity=0.130 Sum_probs=126.3
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---c--------------CCCCceEEEec--CcEEEEEEccccc
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---L--------------ELGSRFKTTAD--FGFVTLDLTEVYD 133 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---i--------------~~~~~~~~~~~--~~~~~L~I~~~~~ 133 (805)
.+.+.+|++|+|.|.+.+...+.+.|.|+|. +.. + ....|+.+..+ .+..+|.|.+++.
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 11 LELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred ceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 5679999999999999832222679999983 211 1 12357777654 3577899999999
Q ss_pred CCCeEEEEEEEeC----CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 134 RDQGIYTCRAWNL----AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 134 ~D~G~Y~C~a~n~----~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
+|+|.|.|.+.+. .+.....+.|.|...+....... .......+|.+...+
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~p 145 (256)
T 3umt_A 91 EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGG-------------------------SGGGGSTDIQLTQSP 145 (256)
T ss_dssp GGCEEEEEEECCSTTCCSCEECCCEEEEECC----------------------------------------CCCCEEEEC
T ss_pred ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcc-------------------------cCCCCccccEEEcCC
Confidence 9999999999987 33333455677654211000000 000000245555555
Q ss_pred ccccccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc------------CCCcEEEEEEcCeEEEEEcCCCCcccEE
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILGTKIEDTGV 275 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 275 (805)
... .+.+|++++|.|.+ .+.+.+.+.|||+ +..+. ...++..........|.|.+++.+|+|.
T Consensus 146 ~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 222 (256)
T 3umt_A 146 SSL-SASLGERVSITCRA--SQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVD 222 (256)
T ss_dssp SEE-EECTTCCEEEEEEE--SSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSE
T ss_pred CeE-EEECCCCEEEEEEE--ecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEE
Confidence 444 48899999999998 5677779999984 22211 1245555555667889999999999999
Q ss_pred EEEEEEcCCeeE-EEEEEEEEe
Q psy2166 276 YTCRATNKWGQA-EISVNLECV 296 (805)
Q Consensus 276 Y~C~~~n~~g~~-~~~~~l~v~ 296 (805)
|+|.+.+..... .....|.|.
T Consensus 223 Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 223 YYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp EEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEeeCCCcEECCCEEEEEE
Confidence 999999864332 233555554
No 256
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.73 E-value=6.6e-17 Score=164.56 Aligned_cols=194 Identities=17% Similarity=0.197 Sum_probs=126.2
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec-----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL-----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i-----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
+..+.+.+|++|+|.|.+.+...+.+.|.|+|++ ..+ ....|+.+..+ ++..+|.|.++
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 3367899999999999998321136789999953 111 01357777653 45679999999
Q ss_pred ccCCCeEEEEEEEeCCe---eE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 132 YDRDQGIYTCRAWNLAG---ET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g---~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
+.+|+|.|+|.+.|..| .. ...+.|.|...+... |.. .......++.+.
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~-----~~~---------------------~~~~~~~~~~~~ 166 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGS-----GGG---------------------GSGGGGSENVLT 166 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC-----------------------------------------CCCEE
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCccc-----CCc---------------------cCCCCccceEEe
Confidence 99999999999999865 11 123467776532100 000 000001234444
Q ss_pred cccccccccCCCceEEEEEEEeeCCCCCeEEEEEE--CCEEcc------------CCCcEEEEEEcCeEEEEEcCCCCcc
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY--NGKPIE------------ASHRIRTVHAFGMVVLEILGTKIED 272 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k--~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d 272 (805)
..+... .+.+|++++|.|.+ .+.+ +.+.||| +|..+. ...++..........|.|.+++.+|
T Consensus 167 ~~p~~~-~v~~G~~v~L~C~~--~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 242 (282)
T 1qok_A 167 QSPAIM-SASPGEKVTITCSA--SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAED 242 (282)
T ss_dssp EECSEE-EECTTCCEEEEEEE--SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cCCCEE-EEcCCCcEEEEEEe--cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhH
Confidence 444443 47899999999998 6677 7999999 665441 1345555445567789999999999
Q ss_pred cEEEEEEEEcCCeeE-EEEEEEEEe
Q psy2166 273 TGVYTCRATNKWGQA-EISVNLECV 296 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~-~~~~~l~v~ 296 (805)
+|.|+|.+.+..... .....|.|.
T Consensus 243 sG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 243 AATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEEEeeCCCceEeCCEEEEEe
Confidence 999999998754322 233445543
No 257
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.73 E-value=5.3e-17 Score=162.31 Aligned_cols=144 Identities=14% Similarity=0.085 Sum_probs=91.9
Q ss_pred ceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceE-EEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeee
Q psy2166 617 RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV-TKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFT 695 (805)
Q Consensus 617 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~ 695 (805)
++.+...++...|.|.+++.+|+|.|.|.|.|..+... ....|.|...+...+..... .. ......+|.+.
T Consensus 64 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~-------~~-~~~~~~~~~~~ 135 (250)
T 3esu_F 64 RFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSG-------GG-GSGGGGSEVQL 135 (250)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC--------------------------------C
T ss_pred CEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccc-------cc-cccCcccceEE
Confidence 34444445666799999999999999999999866533 33467776432110000000 00 00000233444
Q ss_pred ecCCcccccCCCCeEEEEEEEeecCCC--CeEEEEEEC--CEEcc-----------------CCCCeEEEee--CcEEEE
Q psy2166 696 SEFQHLSNLSEGEIAHFEASLIPVGDQ--TMTVEFLYN--GKPIE-----------------ASHRIRTVHA--FGMVVL 752 (805)
Q Consensus 696 ~~~~~~~~v~~G~~~~l~C~~~~~g~p--~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L 752 (805)
..+... .+.+|++++|.|.+. |.| .+.|.|+|+ |..+. ...|+.+..+ ....+|
T Consensus 136 ~~~~~~-~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 212 (250)
T 3esu_F 136 QQSGPE-LVKPGASVKISCKDS--GYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYM 212 (250)
T ss_dssp EECCCE-EECTTCCEEEEEECC--STTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred ecCCce-EEcCCceEEEEEEec--CCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEE
Confidence 455556 799999999999998 766 789999997 43321 1256666544 456789
Q ss_pred EEcCCCCCCCEEEEEEEEc
Q psy2166 753 EILGTKIEDTGVYTCRATN 771 (805)
Q Consensus 753 ~i~~v~~~d~G~Y~C~a~N 771 (805)
.|.+++.+|+|.|.|.|.|
T Consensus 213 ~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 213 QLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp EECSCCGGGCEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEec
Confidence 9999999999999999998
No 258
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.73 E-value=8.8e-17 Score=154.71 Aligned_cols=153 Identities=14% Similarity=0.150 Sum_probs=105.2
Q ss_pred CCCeEEEEECCEEcc------------CCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceE-----EEEEEEE
Q psy2166 599 QLPEVEWFYNGKKLP------------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV-----TKASLKC 661 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-----~~~~l~V 661 (805)
+.+.+.|++++..+. ...+..+.. .+...|.|.+++.+|+|.|+|.|.|..|... ..+.|.|
T Consensus 26 ~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V 104 (201)
T 1dr9_A 26 AQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDI-TNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSV 104 (201)
T ss_dssp HHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEES-TTTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEE
T ss_pred cccEEEEEeCCcEEEEEeCCceeecCcccceeEEcc-CCCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEE
Confidence 346899999998762 012232211 1234599999999999999999999877553 4667777
Q ss_pred eeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCe
Q psy2166 662 VSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI 741 (805)
Q Consensus 662 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~ 741 (805)
..++ .+|.+... ....|+.++|.|.+. .|.|.|.|+|+|||+.+......
T Consensus 105 ~~~~------------------------~~p~~~~~-----~~~~g~~~~l~C~~~-~g~P~p~i~W~k~g~~l~~~~~~ 154 (201)
T 1dr9_A 105 KADF------------------------PTPSISDF-----EIPTSNIRRIICSTS-GGFPEPHLSWLENGEELNAINTT 154 (201)
T ss_dssp ECCC------------------------CCCEEEEE-----ECSSTTEEEEEEEEE-EESSCEEEEEEESSCEECCSEEE
T ss_pred cCCC------------------------CCCceEec-----cCCCCCeEEEEEecC-CccCCCEEEEEECCEECccccce
Confidence 6432 23555432 224599999999993 28899999999999988765333
Q ss_pred EEEeeC-cE-EEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEE
Q psy2166 742 RTVHAF-GM-VVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 782 (805)
Q Consensus 742 ~~~~~~-~~-~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 782 (805)
...... +. ....+..+..+|+|.|+|.|.|..|..+..+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 155 VSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 222222 32 222334556789999999999999988776554
No 259
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.73 E-value=3.5e-17 Score=161.55 Aligned_cols=183 Identities=11% Similarity=0.090 Sum_probs=126.6
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+|.|...+.. .+.+|++++|.|.+ .+ +...+.|||+|..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 6 ~kP~i~~~P~~--~v~~G~~VtL~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 6 PKPFIWAEPHF--MVPKEKQVTICCQG--NY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeeCCC--ccCCCCcEEEEEee--CC-CCcEEEEEECCCcccccccc-ccCCcceeEEEecCCCcccCeEEEEEE
Confidence 45778777765 48899999999987 33 45789999999876421000 001123467999999999999999999
Q ss_pred EcCCeeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceEEEEe
Q psy2166 281 TNKWGQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 358 (805)
Q Consensus 281 ~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~ 358 (805)
.+..+.. +..+.|.|.... .+|.+...+. . .+.+|+.++|.|.+. + +.+.+.|+|+|..+.. .....
T Consensus 80 ~~~~~~s~~S~~~~L~V~~~~--~~P~i~~~p~-~-~v~~G~~vtL~C~~~--~-~~~~~~w~k~g~~~~~----~~~~~ 148 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTEMY--DTPTLSVHPG-P-EVISGEKVTFYCRLD--T-ATSMFLLLKEGRSSHV----QRGYG 148 (242)
T ss_dssp EETTEECCCCCCEEEEEECCS--CCCEEEEESC-S-EEETTCEEEEEEECT--T-SCSEEEEEECSSSCEE----EEEEC
T ss_pred ecCCccccCCcceEEEeeccc--CCCceEccCC-C-ccCCCCcEEEEEecC--C-CCCEEEEEECCCccCc----cccCC
Confidence 8865433 344566665321 3566665443 2 378999999999985 3 3569999999976643 11223
Q ss_pred CcEEEEEEcccCcCCceEEEEEEEeCc-e--eeEEEEEEEEEecc
Q psy2166 359 FGFVVMDIAYVQSHDSGEYVCRAWNKY-G--EDFTRATIKCFGKG 400 (805)
Q Consensus 359 ~~~~~l~i~~v~~~d~G~Y~C~a~n~~-g--~~~~~~~l~V~~~~ 400 (805)
.....|.|.+++.+|+|.|+|.+.|.. . .....+.|.|.+.+
T Consensus 149 ~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 149 KVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp SSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred CceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 345679999999999999999999864 1 23344677777543
No 260
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.73 E-value=7e-17 Score=153.92 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=100.3
Q ss_pred CCCeEEEEECCEEcc---CC---------------CceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2166 599 QLPEVEWFYNGKKLP---HG---------------HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~---~~---------------~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 660 (805)
+.+.+.|+++|..+. .+ .|+.+.. ...|.|.+++.+|+|.|+|.|.|..|.....+.|.
T Consensus 27 ~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~ 103 (193)
T 2if7_A 27 KVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ---SYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLR 103 (193)
T ss_dssp CCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECT---TCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred cccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECC---CeEEEECCCCcccCceEEEEEEecCCCeEEEEEEE
Confidence 346899999987552 11 1333332 23499999999999999999999998877788899
Q ss_pred EeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCC-eEEEEEEEeecC-CCCeEEEEEECCEEccCC
Q psy2166 661 CVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE-IAHFEASLIPVG-DQTMTVEFLYNGKPIEAS 738 (805)
Q Consensus 661 V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~-~~~l~C~~~~~g-~p~~~v~W~~~g~~l~~~ 738 (805)
|.+++ ..|.+..... .+..|. .++|.|.+. | .|.|.|+|+|+|+.+...
T Consensus 104 V~~~~------------------------~~p~i~~~~~---~~~~g~~~v~L~C~~~--g~~p~p~i~W~~~g~~l~~~ 154 (193)
T 2if7_A 104 ILRQL------------------------RNIQVTNHSQ---LFQNMTCELHLTCSVE--DADDNVSFRWEALGNTLSSQ 154 (193)
T ss_dssp EECCC------------------------EEEEEEECCC------CSSEEEEEEEEEE--SCCTTCEEEEEETTEEEESS
T ss_pred EEccC------------------------CCCeEecCce---eecCCCceEEEEEEEe--cCCCceEEEEEeCCEEcCCC
Confidence 87532 2355554432 234565 899999999 7 468999999999876432
Q ss_pred CCeEEEeeCcEEEEEEcCCCCC-CCEEEEEEEEcCCccEEEEE
Q psy2166 739 HRIRTVHAFGMVVLEILGTKIE-DTGVYTCRATNKWGQAEISV 780 (805)
Q Consensus 739 ~~~~~~~~~~~~~L~i~~v~~~-d~G~Y~C~a~N~~G~~~~~~ 780 (805)
+ .|.|.....+ |+|.|+|.|.|.+|..+..+
T Consensus 155 ---------~--~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 155 ---------P--NLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp ---------S--EEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred ---------C--eEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 2 3666544554 99999999999999886554
No 261
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.73 E-value=1.8e-17 Score=162.39 Aligned_cols=179 Identities=13% Similarity=0.142 Sum_probs=116.0
Q ss_pred cccCCCeEEEEEEEeeCCCC--CcEEEEEECC--EE---c----------------cCCCceEEEee--CCEEEEEEccC
Q psy2166 507 QLKEGQSAHFEARLTPVTDP--DLVVEWFYNG--KK---L----------------PHGHRYRTFHD--FGIVILDILYC 561 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~g--~~---l----------------~~~~~~~~~~~--~~~~~L~i~~v 561 (805)
.+.+|++++|.|.+. +.| .+.+.|+|++ .. + ....|+.+..+ .+...|.|.++
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 11 LVQSGGSLRLSCATS--GFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp EECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred eEcCCCEEEEEEEec--CccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 388999999999998 444 6789999842 21 1 01246665543 34667999999
Q ss_pred CCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEE
Q psy2166 562 YEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641 (805)
Q Consensus 562 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 641 (805)
+.+|+|.|.|.+.|..|... . .. .+
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~-----------~---------~~---------~~-------------------------- 113 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYER-----------F---------SY---------WG-------------------------- 113 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCS-----------C---------CC---------BC--------------------------
T ss_pred CcccCeEEEEEEeccCCccc-----------c---------eE---------eC--------------------------
Confidence 99999999999977543100 0 00 00
Q ss_pred EEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC
Q psy2166 642 YECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD 721 (805)
Q Consensus 642 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~ 721 (805)
....|.|...+ ..+|.+...+... .+.+|+.++|.|.+. |.
T Consensus 114 -------------~~~~l~V~~~~-----------------------~~~P~i~~~~~~~-~~~~g~~v~L~C~~~--g~ 154 (222)
T 1q9r_B 114 -------------QGTLVTVSAAK-----------------------TTPPSVYPLAPGS-AAQTNSMVTLGCLVK--GY 154 (222)
T ss_dssp -------------CCEEEEECSSC-----------------------CBCCEEEEECCCS-CCCCSSEEEEEEEEE--EE
T ss_pred -------------CceEEEeccCC-----------------------CCCCeEEEccccc-cccCCCcEEEEEEEc--cE
Confidence 00112221100 0245554433333 567899999999998 64
Q ss_pred -CCe-EEEEEECCEEccCCCCeEEEeeCc----EEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEE
Q psy2166 722 -QTM-TVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 783 (805)
Q Consensus 722 -p~~-~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 783 (805)
|.| .|+|+++|+.+... ........+ ...|.|.++..+| |.|+|.|.|.+|.......+.
T Consensus 155 ~P~p~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~ 220 (222)
T 1q9r_B 155 FPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 220 (222)
T ss_dssp BSSCCEEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred ECCCCEEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEecc
Confidence 888 99999999876432 111111222 2368999999999 999999999999877666554
No 262
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.73 E-value=4.6e-17 Score=161.32 Aligned_cols=171 Identities=16% Similarity=0.177 Sum_probs=123.1
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EE------------ccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KP------------IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~------------l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|++++|.|.+. +.+.+.+.|+|++ .. .....++..........|.|.+++.+|+|.|+|.+
T Consensus 36 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 113 (237)
T 3sob_L 36 ASVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQ 113 (237)
T ss_dssp EETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EeCCCcEEEEEecC--CCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEee
Confidence 88999999999997 6688899999832 11 11235677666667788999999999999999999
Q ss_pred EeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..+... ....+.|..
T Consensus 114 ~~~~~~~~~~~~~l~V~~-------------------------------------------------------------- 131 (237)
T 3sob_L 114 SYTTPPTFGQGTKVEIKR-------------------------------------------------------------- 131 (237)
T ss_dssp CSSSSCEECCCEEEEEEC--------------------------------------------------------------
T ss_pred ccCCceEEcCcEEEEEec--------------------------------------------------------------
Confidence 88765322 234555532
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC-CcEEEEEECCEEc
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP-DLVVEWFYNGKKL 539 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p-~~~v~W~~~g~~l 539 (805)
...+|.+....+... +.+|+.++|.|.+.+ +.| .+.|+|+|||..+
T Consensus 132 -------------------------------~~~~p~v~~~~~~~~-~~~g~~v~l~C~~~~-~~p~~~~v~W~k~g~~~ 178 (237)
T 3sob_L 132 -------------------------------TVAAPSVFIFPPSDE-QLKSGTASVVCLLNN-FYPREAKVQWKVDNALQ 178 (237)
T ss_dssp -------------------------------CCBCCEEEEECCCHH-HHHHTEEEEEEEEEE-EBSSCCEEEEEETTEEC
T ss_pred -------------------------------CCCCCceEEeCCChh-hccCCceEEEEEEcc-cCCCceEEEEEECCCCC
Confidence 135677766555544 556889999999996 245 6899999999998
Q ss_pred cCCC--ceEEE-eeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEEE
Q psy2166 540 PHGH--RYRTF-HDFG----IVILDILYCYEENSGVYECRATNKYGSDVTK 583 (805)
Q Consensus 540 ~~~~--~~~~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~ 583 (805)
..+. ..... ..++ .+.|.|.....+|+|.|+|.|.|........
T Consensus 179 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 179 SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred CCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 7531 00001 1111 3468999999999999999999987655433
No 263
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.73 E-value=3.6e-17 Score=162.22 Aligned_cols=177 Identities=14% Similarity=0.144 Sum_probs=114.7
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---------------cCCCCceEEEe-cCcEEEEEEcccccC
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---------------LELGSRFKTTA-DFGFVTLDLTEVYDR 134 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---------------i~~~~~~~~~~-~~~~~~L~I~~~~~~ 134 (805)
+..+.+.+|+.++|.|. . +.|.+.|.|+|+ +.. -....|+.+.. .....+|+|.+++.+
T Consensus 7 p~~~~v~~G~~v~L~C~-~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 83 (238)
T 2p1y_A 7 PRNKVAVTGGKVTLSCN-Q--TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPS 83 (238)
T ss_dssp CSEEEEETTCCEEEEEE-E--CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGG
T ss_pred ccceEEeCCCEEEEEee-c--CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcc
Confidence 44678999999999999 5 578889999995 211 11235776664 334568999999999
Q ss_pred CCeEEEEEEEeCCeeE-----EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 135 DQGIYTCRAWNLAGET-----FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
|+|.|+|.|.|..|.. .....|.|...+.... +|. . ...+.+...+
T Consensus 84 DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~---p~~-------~-------------------~~~~~v~~~p 134 (238)
T 2p1y_A 84 QTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAK---KDA-------A-------------------KKDGQVRQSP 134 (238)
T ss_dssp GCEEEEEEEEC------CEEECCCEEEEEECCCHHHH---HHH-------H-------------------HHHTCCEEEC
T ss_pred cCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCc---CCc-------c-------------------cceeeEEccC
Confidence 9999999999875421 1234566643221000 000 0 0001333333
Q ss_pred ccccccCCCceEEEEEEEeeCCCCCeEEEEEECC--E---Ec---------cCCCcEEEEE--EcCeEEEEEcCCCCccc
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--K---PI---------EASHRIRTVH--AFGMVVLEILGTKIEDT 273 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g--~---~l---------~~~~~~~~~~--~~~~~~L~i~~~~~~d~ 273 (805)
... .+.+|+.++|.|.+ .+.|.+.+.|+|++ . .+ ....++.... ......|.|.+++.+|+
T Consensus 135 ~~~-~v~~G~~v~L~C~~--~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 211 (238)
T 2p1y_A 135 QSL-TVWEGETAILNCSY--ENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 211 (238)
T ss_dssp SEE-EEETTSCEEEEEEC--CCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGC
T ss_pred ceE-EEeCCCeEEEEEEE--ecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHC
Confidence 333 47899999999988 67788999999964 1 11 1123443332 22357899999999999
Q ss_pred EEEEEEEEcCC
Q psy2166 274 GVYTCRATNKW 284 (805)
Q Consensus 274 G~Y~C~~~n~~ 284 (805)
|.|+|.|.|..
T Consensus 212 G~Y~C~a~n~~ 222 (238)
T 2p1y_A 212 ATYFCAAIDTN 222 (238)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEeeCC
Confidence 99999999973
No 264
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.73 E-value=7.5e-17 Score=151.02 Aligned_cols=137 Identities=15% Similarity=0.280 Sum_probs=104.8
Q ss_pred CCCeEEEEE--CCEEc----------cCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceE--EEEEEEEeec
Q psy2166 599 QLPEVEWFY--NGKKL----------PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV--TKASLKCVSK 664 (805)
Q Consensus 599 ~~p~v~W~~--~g~~l----------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~ 664 (805)
+.+.|.|+| ++..| ..+.++.+..++ .|.|.+++.+|+|.|+|.|.|..|... ..+.|.|.++
T Consensus 29 ~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 29 DIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp SEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECC
T ss_pred cCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCc
Confidence 357999999 98877 356777777554 399999999999999999999988764 4667888753
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEE
Q psy2166 665 TNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTV 744 (805)
Q Consensus 665 p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~ 744 (805)
. .+|.|... +..++|.|.+. +.|.|.++|+++|..+ ..
T Consensus 106 ~------------------------~~P~i~~~---------~~~v~L~C~~~--~~p~~~~~W~~~g~~l-~~------ 143 (182)
T 1hnf_A 106 V------------------------SKPKISWT---------CINTTLTCEVM--NGTDPELNLYQDGKHL-KL------ 143 (182)
T ss_dssp C------------------------CCCEEEEE---------TTTTEEEEECS--SCSSCEEEEEESSCEE-EE------
T ss_pred C------------------------CCCEEEEc---------cCcEEEEeEcc--CCCCCEEEEEECCEEC-CC------
Confidence 1 35655432 23689999998 8899999999999887 21
Q ss_pred eeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEE
Q psy2166 745 HAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 784 (805)
Q Consensus 745 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 784 (805)
... .|.+.. ..+|+|.|+|+|.|.+|..+....+..
T Consensus 144 -~~~--~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 144 -SQR--VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp -ESS--CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred -CCc--EEEEec-ccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 112 233432 578999999999999999988877643
No 265
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.72 E-value=3.7e-18 Score=161.79 Aligned_cols=149 Identities=16% Similarity=0.314 Sum_probs=107.7
Q ss_pred cCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcC-CCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 215 LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG-TKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
..+|+.+.|.|.+ .+ +. .|.|+|+|..+..... ..|.|.+ ++.+|+|.|+|.|.|..|.....+.+
T Consensus 11 ~~~G~~v~L~C~~--~~-~~-~i~W~k~g~~l~~~~~---------~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 11 SISGTSVELTCPL--DS-DE-NLKWEKNGQELPQKHD---------KHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EEETTEEEEECSS--CC-CT-TCEEEETTEEECSCCC---------SEEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EeCCcEEEEEEeC--CC-CC-ceEEEECCEECCCCCC---------CEEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 4589999999987 44 33 3999999999876421 2699999 99999999999999988875555555
Q ss_pred EEeccCCCC-------------CCeEEecCC------CcccccCCCeEEEEEEEeecCCCCcEEEEEECCEEccCCCceE
Q psy2166 294 ECVDKSKGQ-------------PPKFTSHIK------SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 354 (805)
Q Consensus 294 ~v~~~~~~~-------------~p~~~~~~~------~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~ 354 (805)
.|....... ++.+..... ....+.+|+.+.|.|.+ |.|.|.|+|+|..+.....
T Consensus 78 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-----p~p~i~W~k~g~~i~~~~~-- 150 (186)
T 1jbj_A 78 RVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-----TDKTIKWLKDGSIISPLNA-- 150 (186)
T ss_dssp CCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-----SCSCEEEEETTEECCCSSC--
T ss_pred EEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC-----CCCeEEEEECCEECcccCC--
Confidence 543321110 000000000 00124589999999975 6789999999999874332
Q ss_pred EEEeCcEEEEEEcccCcCCceEEEEEEEeCceee
Q psy2166 355 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGED 388 (805)
Q Consensus 355 ~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 388 (805)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 151 -----~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 151 -----TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp -----CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred -----CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 12258899999999999999999998876
No 266
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.72 E-value=1.7e-17 Score=160.91 Aligned_cols=87 Identities=8% Similarity=0.041 Sum_probs=61.6
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCC-CCe-EEEEEECCEEccCCCCeEEEeeCc---EEEEEEcCCCCCCCEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-QTM-TVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGV 764 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~ 764 (805)
.+|.+...+... .+.+|+.++|.|.+. |. |.| .|+|+++|..+.......+..++. ...|.|.++..+| |.
T Consensus 117 ~~P~v~~~~~~~-~~~~g~~v~L~C~~~--g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~ 192 (210)
T 3d9a_H 117 TPPSVYPLAPGS-AAQTNSMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ET 192 (210)
T ss_dssp BCCEEEEECCTT-SCCCSSEEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SC
T ss_pred CCCEEEEecCCc-ccccCCcEEEEEEEe--eEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-Cc
Confidence 356666555445 678999999999998 65 888 999999998643211111112211 2469999998877 99
Q ss_pred EEEEEEcCCccEEEEE
Q psy2166 765 YTCRATNKWGQAEISV 780 (805)
Q Consensus 765 Y~C~a~N~~G~~~~~~ 780 (805)
|+|.|.|..|......
T Consensus 193 Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 193 VTCNVAHPASSTKVDK 208 (210)
T ss_dssp CEEEEEEGGGTEEEEE
T ss_pred EEEEEEeCCCCccccc
Confidence 9999999999876543
No 267
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.72 E-value=8.7e-17 Score=160.37 Aligned_cols=180 Identities=16% Similarity=0.139 Sum_probs=117.3
Q ss_pred CCCceecCCCcEEEEEEEecCCCC-----CceEEEEECC--Ee---c---------CCCCceEEEecCcEEEEEEccccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP-----NLKIEWIFNG--KP---L---------ELGSRFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p-----~~~v~W~k~g--~~---i---------~~~~~~~~~~~~~~~~L~I~~~~~ 133 (805)
+..+.+.+|+.++|.|.+. +.+ .+.|.|+|+. .. + ....|+.+..+++..+|.|.+++.
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 85 (247)
T 1svz_A 8 PLYLPVSLGDQASISCRSS--QTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA 85 (247)
T ss_dssp CSEEEECTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred CCeEEecCCCCEEEEEeCC--CcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCH
Confidence 4467899999999999998 455 6899999942 21 1 124688877777788999999999
Q ss_pred CCCeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccc
Q psy2166 134 RDQGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHL 212 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 212 (805)
+|+|.|.|.+.|..+.. ...+.|.|...+.... .+. ....++.....++..
T Consensus 86 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~---~~~-------------------------~~~~~~~~~~~~~~~ 137 (247)
T 1svz_A 86 EDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGG---GGS-------------------------GGGGSEVQLQQSGPE 137 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC-------------------------------------------CCEEEECCCE
T ss_pred HHCEEEEEEEccCCccEECCCEEEEEECCccccc---ccc-------------------------ccccCceEEeCCCce
Confidence 99999999999875432 2235666654321000 000 000122222222233
Q ss_pred cccCCCceEEEEEEEeeCCCCCeEEEEEECC--EEc------c-----------CCCcEEEEE--EcCeEEEEEcCCCCc
Q psy2166 213 SNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--KPI------E-----------ASHRIRTVH--AFGMVVLEILGTKIE 271 (805)
Q Consensus 213 ~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g--~~l------~-----------~~~~~~~~~--~~~~~~L~i~~~~~~ 271 (805)
.+.+|++++|.|.+.....+.+.+.|||++ ..+ . ...++.... ......|.|.+++.+
T Consensus 138 -~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 216 (247)
T 1svz_A 138 -LKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNE 216 (247)
T ss_dssp -EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred -eecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChh
Confidence 388999999999984221235799999963 211 0 123444433 234679999999999
Q ss_pred ccEEEEEEEEcC
Q psy2166 272 DTGVYTCRATNK 283 (805)
Q Consensus 272 d~G~Y~C~~~n~ 283 (805)
|+|.|+|.+.|.
T Consensus 217 DsG~Y~C~a~n~ 228 (247)
T 1svz_A 217 DTATYFCVRDRH 228 (247)
T ss_dssp GCEEEEEEEEEG
T ss_pred HCEEEEEEEecc
Confidence 999999999985
No 268
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.72 E-value=3.7e-17 Score=160.16 Aligned_cols=178 Identities=12% Similarity=0.106 Sum_probs=120.8
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c----------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L----------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i----------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
.+.+.+|+.++|.|.+.+...+.+.|.|+|+. .. + ...+|+.+..+ .+..+|+|.++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 9 GGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred ceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 56899999999999998321126789999852 21 1 01357777654 35679999999
Q ss_pred ccCCCeEEEEEEEeCCe-----eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 132 YDRDQGIYTCRAWNLAG-----ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
+.+|+|.|.|.+.+..+ .......|.|...+ ..+|.+.
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~ 131 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK-------------------------------------TTPPSVY 131 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC-------------------------------------CBCCEEE
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCC-------------------------------------CCCCeEE
Confidence 99999999999998654 12233466665321 1335444
Q ss_pred cccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEEEEEEEE
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYTCRAT 281 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~ 281 (805)
...... .+.+|+.++|.|.+.. ..|.+ .+.|+++|..+... .......++ .+.|.|.++..+| |.|+|.|.
T Consensus 132 ~~~~~~-~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~ 207 (222)
T 1q9r_B 132 PLAPGS-AAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVA 207 (222)
T ss_dssp EECCCS-CCCCSSEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEE
T ss_pred Eccccc-cccCCCcEEEEEEEcc-EECCCCEEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEE
Confidence 433222 2568999999999842 24777 99999999876432 111111222 2468999999999 99999999
Q ss_pred cCCeeEEEEEEE
Q psy2166 282 NKWGQAEISVNL 293 (805)
Q Consensus 282 n~~g~~~~~~~l 293 (805)
|..+.......+
T Consensus 208 n~~~~~~~~~~i 219 (222)
T 1q9r_B 208 HPASSTKVDKKI 219 (222)
T ss_dssp EGGGTEEEEEEC
T ss_pred ccCCCCcEEEec
Confidence 998876554443
No 269
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.72 E-value=8.4e-18 Score=166.32 Aligned_cols=179 Identities=14% Similarity=0.150 Sum_probs=120.0
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCc-eEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCCCe
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNL-KIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQG 137 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G 137 (805)
+..+.+.+|+.++|.|.+.+. .+.+ .|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 104 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSS-NIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEA 104 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTT-TTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCS
T ss_pred CCcEEeeCCCcEEEEEEecCC-CCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCE
Confidence 446789999999999999842 2333 79999963 222 1235787776677789999999999999
Q ss_pred EEEEEEEeCCee---EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 138 IYTCRAWNLAGE---TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 138 ~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
.|+|.+.|..+. ......|.|...+ ..+|.+........
T Consensus 105 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~p~v~~~~~~~~- 146 (234)
T 2j6e_L 105 DYYCATWDDSLSAVIFGGGTKLTVLGQP-------------------------------------KAAPSVTLFPPSSE- 146 (234)
T ss_dssp EEEEEEEETTTTEEEECCCBCCCBCCCC-------------------------------------CCCCCCCEECCCHH-
T ss_pred EEEEEEEcCCcceeEecCCEEEEEecCC-------------------------------------CCCCcccccCCChh-
Confidence 999999998762 1112233332110 13455544333322
Q ss_pred cCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEE--EEc----CeEEEEEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 215 LSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTV--HAF----GMVVLEILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~--~~~----~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
+.+|+.++|.|.+.. ..|. +.+.|+|+|..+......... ..+ ..+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 147 ~~~g~~v~L~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 147 ELQANKATLVCLISD-FFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp HHTTSCCCEEECCCB-CSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred HhcCCceEEEEEEEE-EcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 346889999998842 2343 599999999998654211000 111 13579999999999999999999987765
Q ss_pred EEEE
Q psy2166 288 EISV 291 (805)
Q Consensus 288 ~~~~ 291 (805)
+.++
T Consensus 226 ~~~~ 229 (234)
T 2j6e_L 226 EKTV 229 (234)
T ss_dssp CEEE
T ss_pred EEec
Confidence 4443
No 270
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.71 E-value=1.7e-16 Score=159.27 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=118.2
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
.+.+.+|++++|.|.+.+...+.+.+.|+|++ ..+ ....|+.+..++..++|.|.+++.+|+|.|+
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 90 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYY 90 (256)
T ss_dssp EEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred cEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEE
Confidence 57899999999999998422277899999942 111 1235888877777889999999999999999
Q ss_pred EEEEeCCee---EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 141 CRAWNLAGE---TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 141 C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|.+.+..+. ......|.|...+..... .+. ..+ . .......++.+...+ .. .+.+
T Consensus 91 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~--~~~--~~~----------~------~~~~~~~~~~~~~~~-~~-~v~~ 148 (256)
T 3ux9_B 91 CQVRDNNENEWVFGGGTKLTVLGSGGSTIT--SYN--VYY----------T------KLSSSGSEVQLVESG-GG-LVQP 148 (256)
T ss_dssp EEEEETTTTEEEECCCEEEEEC------------------------------------------CCEEEEEC-CE-EECT
T ss_pred EEEEECCCCceEECCCEEEEEECCCCCcCc--cce--eEE----------e------ecCCCccceeEEcCC-Ce-EEcC
Confidence 999986432 223456776554311000 000 000 0 000000122333322 22 3789
Q ss_pred CceEEEEEEEeeCCCC--CeEEEEEEC--CEEc------c-----------CCCcEEEEEE--cCeEEEEEcCCCCcccE
Q psy2166 218 GEIAHFEASLIPVGDQ--TMTVEFLYN--GKPI------E-----------ASHRIRTVHA--FGMVVLEILGTKIEDTG 274 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p--~~~i~W~k~--g~~l------~-----------~~~~~~~~~~--~~~~~L~i~~~~~~d~G 274 (805)
|++++|.|.+. +.+ .+.+.|||+ +..+ . ...++.+... .....|.|.+++.+|+|
T Consensus 149 G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 226 (256)
T 3ux9_B 149 GGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTA 226 (256)
T ss_dssp TCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CCeEEEEEEEe--CCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCE
Confidence 99999999984 444 789999986 3222 0 1125544443 34678999999999999
Q ss_pred EEEEEEEcCC
Q psy2166 275 VYTCRATNKW 284 (805)
Q Consensus 275 ~Y~C~~~n~~ 284 (805)
.|+|.|.|..
T Consensus 227 ~Y~C~~~~~~ 236 (256)
T 3ux9_B 227 VYYCARYIDF 236 (256)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEEcCC
Confidence 9999999864
No 271
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.71 E-value=4.2e-17 Score=158.99 Aligned_cols=171 Identities=15% Similarity=0.153 Sum_probs=118.8
Q ss_pred ccCCCeEEEEEEEeecCCC-CcEEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDP-ELKVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCR 380 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p-~~~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~ 380 (805)
+.+|+.++|.|.+.+ +.+ .+.|.|+|++ ..+ ....++.+........|.|.+++.+|+|.|.|.
T Consensus 12 v~~G~~v~L~C~v~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (216)
T 2xzc_L 12 AAPGQKVTISCSGSS-SNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCG 90 (216)
T ss_dssp ECTTCCEEEEEECCT-TTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred ecCCCeEEEEEEeec-CCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEEE
Confidence 889999999999541 332 5789999853 221 113467666667778899999999999999999
Q ss_pred EEeCce-e-eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEE
Q psy2166 381 AWNKYG-E-DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 458 (805)
Q Consensus 381 a~n~~g-~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (805)
|.|..+ . ......|.|..
T Consensus 91 ~~~~~~~~~~~~~~~l~V~~------------------------------------------------------------ 110 (216)
T 2xzc_L 91 TWDSSLNPVFGGGTKLEIKR------------------------------------------------------------ 110 (216)
T ss_dssp EECTTSCEEEBCCEEEEECC------------------------------------------------------------
T ss_pred EEeCCCcceECCCEEEEEcC------------------------------------------------------------
Confidence 999876 1 12234455421
Q ss_pred EEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEEEECCE
Q psy2166 459 ARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEWFYNGK 537 (805)
Q Consensus 459 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W~~~g~ 537 (805)
...+|.+....+... ..+|+.++|.|.+.+. .|. +.|+|+|||+
T Consensus 111 ---------------------------------~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~-~P~~~~v~W~k~g~ 155 (216)
T 2xzc_L 111 ---------------------------------TVAAPSVFIFPPSDE-QLKSGTASVVCLLNNF-YPREAKVQWKVDNA 155 (216)
T ss_dssp ---------------------------------CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEE-BSSCCEEEEEETTE
T ss_pred ---------------------------------CCCCCceEEeCCChh-hccCCcEEEEEEEEeE-cCCceEEEEEECCe
Confidence 124666666444433 3468899999999952 454 4999999999
Q ss_pred EccCCCceE--EE-eeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEE
Q psy2166 538 KLPHGHRYR--TF-HDFG----IVILDILYCYEENSGVYECRATNKYGSDVT 582 (805)
Q Consensus 538 ~l~~~~~~~--~~-~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 582 (805)
.+..+.... .. ..++ .+.|.|..+..+|+|.|+|.|.|.......
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 156 LQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp ECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred ecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 986551111 11 1112 236999999999999999999998765443
No 272
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.71 E-value=5e-15 Score=172.29 Aligned_cols=246 Identities=15% Similarity=0.188 Sum_probs=154.6
Q ss_pred CCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccC-CCeEEEEEEEeCCeeEEEEEEEEEe
Q psy2166 81 AQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDR-DQGIYTCRAWNLAGETFTSTTIYCS 159 (805)
Q Consensus 81 G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n~~g~~~~~~~l~V~ 159 (805)
+..+.|.|.+. |.|.+.+.|.|+|..+..-.+ ..|.|..+... ..+.|.|.+.+..|..... .+.+.
T Consensus 91 ~g~l~v~c~~~--g~P~p~i~W~k~g~~~~~~~~---------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~ 158 (731)
T 2v5y_A 91 PGLLNVYVKVN--NGPLGNPIWNISGDPTRTWNR---------AELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVL 158 (731)
T ss_dssp SEEEEEEEEET--TCCCCSEEEEECCCCCSSCEE---------EEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEE
T ss_pred cceEEEEEecC--CCCccceeEEEeCCcCCceeE---------EEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEee
Confidence 45899999998 789999999999987643211 14555554233 3478888777766654321 22222
Q ss_pred ccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEE-
Q psy2166 160 TKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVE- 238 (805)
Q Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~- 238 (805)
... -..+|.|. .+.+. .+.+|+.++|.|.+ .|.|.+.+.
T Consensus 159 ~~~------------------------------------~~~~p~~~-~~~~~-~v~~G~~v~l~C~~--~g~P~p~i~~ 198 (731)
T 2v5y_A 159 GHP------------------------------------CTRTPHFL-RIQNV-EVNAGQFATFQCSA--IGRTVAGDRL 198 (731)
T ss_dssp SSC------------------------------------CSSSCEEC-CCCCE-EEETTSCEEEEEEE--ESCCCTTCEE
T ss_pred ecc------------------------------------cccccccc-cccce-EEeCCCcEEEEEEe--CCCCCCceeE
Confidence 211 01456666 34443 58899999999998 688888887
Q ss_pred EE--ECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEEeccCCCC-CCeEEecCCCcc
Q psy2166 239 FL--YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECVDKSKGQ-PPKFTSHIKSLE 314 (805)
Q Consensus 239 W~--k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~~~~~~-~p~~~~~~~~~~ 314 (805)
|+ ++|..+.......+........|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|...+... +|.+.
T Consensus 199 W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~------- 271 (731)
T 2v5y_A 199 WLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLA------- 271 (731)
T ss_dssp EEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEE-------
T ss_pred EEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCccee-------
Confidence 88 6887765432211111122468999999999999999999999997 5666777776433211 11111
Q ss_pred cccCCCeEEEEEEEeec-C-CCC--cEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEE--eCceee
Q psy2166 315 GLKDGDSAHFECTLTPV-N-DPE--LKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW--NKYGED 388 (805)
Q Consensus 315 ~~~~g~~~~l~C~~~~~-~-~p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~--n~~g~~ 388 (805)
......+.|.|..... + .+. ..|.|...+. .+..........+.|.++...+.+.|+|.|. |..|..
T Consensus 272 -~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s 344 (731)
T 2v5y_A 272 -SVGATYLWIQLNANSINGDGPIVAREVEYCTASG------SWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTG 344 (731)
T ss_dssp -EECSSCEEEECCCSSBSSCSCCCEEEEEEEESSS------SCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSC
T ss_pred -ccCCceEEEEeCCcccCCCCccEEEEEEEEECCC------CceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccc
Confidence 2234678888875311 1 222 2466655421 1111111122357889999999999999999 988876
Q ss_pred EEEE
Q psy2166 389 FTRA 392 (805)
Q Consensus 389 ~~~~ 392 (805)
..+.
T Consensus 345 ~~S~ 348 (731)
T 2v5y_A 345 SPGP 348 (731)
T ss_dssp CBCC
T ss_pred cCCC
Confidence 5443
No 273
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.71 E-value=1.9e-16 Score=158.89 Aligned_cols=146 Identities=16% Similarity=0.186 Sum_probs=93.0
Q ss_pred ceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceE---EEEEEEEeeccccccccccccccCCCCCCCC-CCCCCCC
Q psy2166 617 RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV---TKASLKCVSKTNLILESQLPELRRQPAGVPD-SEDGRPP 692 (805)
Q Consensus 617 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~---~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~-~~~~~~P 692 (805)
++.+...++...|.|.+++.+|+|.|.|.|.|..+... ....|.|...+...... + ...+.. .....++
T Consensus 64 r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~--~-----~~~~~~~~~~~~~~ 136 (256)
T 3ux9_B 64 RFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITS--Y-----NVYYTKLSSSGSEV 136 (256)
T ss_dssp TEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC-----------------------------CC
T ss_pred cEEEEccCCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCcc--c-----eeEEeecCCCccce
Confidence 44444455667799999999999999999999765332 34677777643210000 0 000000 0000122
Q ss_pred eeeecCCcccccCCCCeEEEEEEEeecCCC--CeEEEEEEC--CEEc-----------------cCCCCeEEEee--CcE
Q psy2166 693 QFTSEFQHLSNLSEGEIAHFEASLIPVGDQ--TMTVEFLYN--GKPI-----------------EASHRIRTVHA--FGM 749 (805)
Q Consensus 693 ~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p--~~~v~W~~~--g~~l-----------------~~~~~~~~~~~--~~~ 749 (805)
.+.. +... .+.+|++++|.|.+. +.| .+.+.|+|+ +..+ ....|+.+..+ ...
T Consensus 137 ~~~~-~~~~-~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 212 (256)
T 3ux9_B 137 QLVE-SGGG-LVQPGGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNT 212 (256)
T ss_dssp EEEE-ECCE-EECTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTE
T ss_pred eEEc-CCCe-EEcCCCeEEEEEEEe--CCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCE
Confidence 3333 3344 689999999999998 766 789999996 3221 11236666554 456
Q ss_pred EEEEEcCCCCCCCEEEEEEEEcCC
Q psy2166 750 VVLEILGTKIEDTGVYTCRATNKW 773 (805)
Q Consensus 750 ~~L~i~~v~~~d~G~Y~C~a~N~~ 773 (805)
..|+|.+++.+|+|.|+|.|.|..
T Consensus 213 ~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 213 LYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEEEECCCChhhCEEEEEEEEcCC
Confidence 789999999999999999999964
No 274
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.71 E-value=8.8e-18 Score=161.57 Aligned_cols=167 Identities=13% Similarity=0.159 Sum_probs=97.5
Q ss_pred CCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeecccccccccccc-cc
Q psy2166 599 QLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPE-LR 677 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~-~~ 677 (805)
|.|.+.|+|+|..+.... .....|.|.+++.+|+|.|+|.+.+.. + ..+.|.|...+.......... ..
T Consensus 28 p~~~i~W~k~g~~l~~~~-------~~~~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~v~~~~~~~~~~~~~~~~~ 97 (204)
T 1sy6_A 28 EAKNITWFKDGKMIGFLT-------EDKKKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVYYRMGSADDAKKDAAKKDD 97 (204)
T ss_dssp CSSEEEEEETTEEEEEEE-------SSCCCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEEEEC---------------
T ss_pred CCCEEEEEECCEECCCCC-------CCCCeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEEEEEecccccccccccccc
Confidence 467999999999885320 112349999999999999999975532 2 224444431000000000000 00
Q ss_pred CCCCCCC-C--CCCCCCCeeeecCCcccccC-CCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC-CeEEEeeCcEEEE
Q psy2166 678 RQPAGVP-D--SEDGRPPQFTSEFQHLSNLS-EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH-RIRTVHAFGMVVL 752 (805)
Q Consensus 678 ~~~~~~~-~--~~~~~~P~~~~~~~~~~~v~-~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~-~~~~~~~~~~~~L 752 (805)
....... . .....+|.+...+. .+. +|++++|.|. |.|.|.|+|+|+|..+.... +..+....+ .|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~p~---~v~~~G~~v~L~C~----g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~--~L 168 (204)
T 1sy6_A 98 AKKDDAKKDGSDGNEEMGGITQTPY---KVSISGTTVILTCP----QYPGSEILWQHNDKNIGGDEDDKNIGSDED--HL 168 (204)
T ss_dssp ---------------------CCCC---EEEEETTEEEEECS----CCCSSCEEEEETTEEESCCTTCTTEEEETT--EE
T ss_pred ccccccccccccccccccceecCCc---eeeecCCcEEEEcC----CCCCCceEEEECCEECCCccCCceEecCCC--EE
Confidence 0000000 0 00001233322222 233 8999999998 67899999999999886542 222233344 79
Q ss_pred EEcCC-CCCCCEEEEEEEEcCCcc-EEEEEEEEE
Q psy2166 753 EILGT-KIEDTGVYTCRATNKWGQ-AEISVNLEC 784 (805)
Q Consensus 753 ~i~~v-~~~d~G~Y~C~a~N~~G~-~~~~~~l~V 784 (805)
.|.++ ..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 169 ~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 169 SLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred EEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 99999 999999999999999996 355555554
No 275
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=5.2e-18 Score=164.94 Aligned_cols=171 Identities=14% Similarity=0.163 Sum_probs=119.2
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEEcc------------CCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKPIF------------HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+. +.|.+.+.|+|+ |..+. ...++.+........|.|.+++.+|+|.|+|.|
T Consensus 11 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 88 (212)
T 1nfd_E 11 VTVGETVKITCSGD--QLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLS 88 (212)
T ss_dssp EETTSCCCEEEEET--TGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEE
T ss_pred EeCCCcEEEEEecC--CCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEE
Confidence 78999999999986 777778999984 33221 135676666667778999999999999999999
Q ss_pred EeC-ceee--EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEE
Q psy2166 382 WNK-YGED--FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFE 458 (805)
Q Consensus 382 ~n~-~g~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (805)
.|. .+.. .....|.|...
T Consensus 89 ~n~~~~~~~~~~~~~l~V~~~----------------------------------------------------------- 109 (212)
T 1nfd_E 89 SYGDNNDLVFGSGTQLTVLRG----------------------------------------------------------- 109 (212)
T ss_dssp EETTTTEEEECCCEEEEEECC-----------------------------------------------------------
T ss_pred EcccCcccccCCceEEEEccC-----------------------------------------------------------
Confidence 973 2211 12244544311
Q ss_pred EEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEE
Q psy2166 459 ARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKK 538 (805)
Q Consensus 459 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~ 538 (805)
...+|.+....+... +.+|+.++|.|.+.+..++.+.|+|+|||+.
T Consensus 110 ---------------------------------~~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 155 (212)
T 1nfd_E 110 ---------------------------------PKSSPKVTVFPPSPE-ELRTNKATLVCLVNDFYPGSATVTWKANGAT 155 (212)
T ss_dssp ---------------------------------CCBCCEEECCCCCHH-HHHTTEECCCEEEEEEBSSCCEEEEEETTEE
T ss_pred ---------------------------------CCCCCEEEeeCCchH-hccCCceEEEEEEEeeECCccEEEEEECCeE
Confidence 124566665444433 5689999999999963223389999999999
Q ss_pred ccCCCceEE--EeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcceE
Q psy2166 539 LPHGHRYRT--FHDFG---IVILDILYCYEENSGVYECRATNKYGSDV 581 (805)
Q Consensus 539 l~~~~~~~~--~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 581 (805)
+..+..... ...++ .+.|.|.++..+|+|.|+|.|.|..+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (212)
T 1nfd_E 156 INDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVE 203 (212)
T ss_dssp ECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCC
T ss_pred cCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEE
Confidence 865432110 01111 23499999999999999999999877643
No 276
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.71 E-value=3.2e-17 Score=160.79 Aligned_cols=178 Identities=16% Similarity=0.170 Sum_probs=115.3
Q ss_pred cCCCCceecCCCcEEEEEEEecCCCCCc---eEEEEECCEecC----------------CCCceEEE-------ecCcEE
Q psy2166 71 PLKPEFKLGEAQPLHLEAQVEPKNDPNL---KIEWIFNGKPLE----------------LGSRFKTT-------ADFGFV 124 (805)
Q Consensus 71 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~---~v~W~k~g~~i~----------------~~~~~~~~-------~~~~~~ 124 (805)
..++.+.+..|++|+|.|.+.+ .+.+ .|+|+|++..+. ...+.... ...+..
T Consensus 6 ~vp~~V~~~~G~~v~L~C~~~~--~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (225)
T 4fmk_A 6 RVLPEVRGRLGGTVELPCHLLP--PTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDA 83 (225)
T ss_dssp ECCSEEEEETTSCEEECCEECS--SCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBC
T ss_pred EeCCEEEEecCCCEEEEEEEEC--CCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcE
Confidence 3344678899999999999984 4433 489999864331 11122221 122345
Q ss_pred EEEEcccccCCCeEEEEEEEeCCeeEEEE-EEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCC
Q psy2166 125 TLDLTEVYDRDQGIYTCRAWNLAGETFTS-TTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPP 203 (805)
Q Consensus 125 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 203 (805)
+|.|.+++.+|+|.|+|.|.+..+..... ..+.+..+ |
T Consensus 84 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~ 122 (225)
T 4fmk_A 84 TLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ-----------------------------------------P 122 (225)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC-----------------------------------------C
T ss_pred EEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecC-----------------------------------------C
Confidence 79999999999999999999876554433 33444322 2
Q ss_pred ceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEEEEEE
Q psy2166 204 QFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYTCR 279 (805)
Q Consensus 204 ~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~ 279 (805)
.+...+... ....++.+.+.|.+. .+.|.+.+.|++++..+....... ...++ .+.|.|.++..+|+|.|+|.
T Consensus 123 ~~~~~~~~~-~~~~~~~~~~~c~~~-~~~P~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d~g~YtC~ 199 (225)
T 4fmk_A 123 ENHAEAQEV-TIGPQSVAVARCVST-GGRPPARITWISSLGGEAKDTQEP-GIQAGTVTIISRYSLVPVGRADGVKVTCR 199 (225)
T ss_dssp EEEEEECCB-CCSSSCEEEEEEEEE-EEBSCCEEEEECSSCCEEEEEEEE-CSSTTCEEEEEEEEECCCGGGTTCEEEEE
T ss_pred ceeecccce-eecceeeeeeeeeec-CCCCCCEEEEEECCccccCCcceE-EecCCCEEEEEEEEEeeCCHHHCCEEEEE
Confidence 222222222 255677788888764 577889999999876553322111 11111 24799999999999999999
Q ss_pred EEcCCeeEEEEEEEE
Q psy2166 280 ATNKWGQAEISVNLE 294 (805)
Q Consensus 280 ~~n~~g~~~~~~~l~ 294 (805)
|.|..+....+..+.
T Consensus 200 a~N~~~~~~~~~~v~ 214 (225)
T 4fmk_A 200 VEHESFEEPILLPVT 214 (225)
T ss_dssp EECTTCSSCEEEEEE
T ss_pred EEcCCCCeEEEEEEE
Confidence 999887654444443
No 277
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.71 E-value=3.8e-17 Score=138.03 Aligned_cols=97 Identities=24% Similarity=0.335 Sum_probs=87.5
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
..||.|...+.+.. +.+|++++|.|.+. |.|.|.|+|+|||+.|..+.++.+..+++...|.|.+++.+|+|.|+|.
T Consensus 11 ~~pP~f~~~p~~~~-v~~G~~~~l~C~~~--G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (107)
T 3knb_B 11 GSPPCFLRFPRPVR-VVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp CEEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCCcEE-EeCCCcEEEEEEEE--EecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEE
Confidence 46789988877765 89999999999999 6788999999999999999999988888888999999999999999999
Q ss_pred EEcCCcceEEEEEEEEeeee
Q psy2166 573 ATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~ 592 (805)
|.|..|..+.++.|.|..+|
T Consensus 88 a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 88 ARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEETTEEEEEEEEEEEEC--
T ss_pred EEECCCEEEEEEEEEEEcCC
Confidence 99999999999999998754
No 278
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.71 E-value=2e-17 Score=160.44 Aligned_cols=177 Identities=17% Similarity=0.143 Sum_probs=117.5
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecC----------------CCCceEEEec--CcEEEEEEcccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLE----------------LGSRFKTTAD--FGFVTLDLTEVY 132 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~----------------~~~~~~~~~~--~~~~~L~I~~~~ 132 (805)
+..+.+.+|++++|.|.+.+...+.+.|.|+|+ |..+. ...|+.+..+ ++..+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 335789999999999999842113479999985 32211 2457777653 356799999999
Q ss_pred cCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccc
Q psy2166 133 DRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHL 212 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 212 (805)
.+|+|.|+|.+.|.. .......|.|.... ..+|.+....+..
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~-------------------------------------~~~P~v~~~~~~~ 128 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAK-------------------------------------TTPPSVYPLAPGS 128 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCC-------------------------------------CBCCEEEEECCTT
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCC-------------------------------------CCCCEEEEecCCc
Confidence 999999999998853 11123456664311 1335554333222
Q ss_pred cccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEc---CeEEEEEcCCCCcccEEEEEEEEcCCeeEE
Q psy2166 213 SNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAF---GMVVLEILGTKIEDTGVYTCRATNKWGQAE 288 (805)
Q Consensus 213 ~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~ 288 (805)
.+.+|+.++|.|.+. ...|.+ .+.|+++|..+...........+ ....|.|.++..+| |.|+|.|.|..+...
T Consensus 129 -~~~~g~~v~L~C~~~-g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 129 -AAQTNSMVTLGCLVK-GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp -SCCCSSEEEEEEEEE-EEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred -ccccCCcEEEEEEEe-eEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 367899999999984 233777 99999998764311100011111 13568998888877 999999999888765
Q ss_pred EE
Q psy2166 289 IS 290 (805)
Q Consensus 289 ~~ 290 (805)
..
T Consensus 206 ~~ 207 (210)
T 3d9a_H 206 VD 207 (210)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 279
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.71 E-value=1.2e-16 Score=158.74 Aligned_cols=178 Identities=17% Similarity=0.183 Sum_probs=117.4
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c---------CCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L---------ELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i---------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|++++|.|.+. +.|.+.|.|+|+. .. + ....|+.+..++...+|.|.+++.+|+|.
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (242)
T 2znx_A 8 PATLSVTPGNSVSLSCRAS--QSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (242)
T ss_dssp CSEEEECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred CCeEEEcCCCcEEEEEEeC--CCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEE
Confidence 3467899999999999998 5778899999953 11 1 12458887767777899999999999999
Q ss_pred EEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 139 YTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 139 Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|.|.+.|..+.. .....|.|..++...... .....++.+...+... .+.+
T Consensus 86 Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~-~v~~ 136 (242)
T 2znx_A 86 YFCQQSNSXPYTFGGGTKLEITGGGGSGGGG----------------------------SGGGGSDIQLQESGPS-LVKP 136 (242)
T ss_dssp EEEEECSSSSCEECCCEEEEEC-------------------------------------------CCEEEEECCS-EECT
T ss_pred EEEeEecCCceEECCCEEEEEcCCCCCCccc----------------------------ccccccceeeecCCcc-eecC
Confidence 999999875432 223456665432100000 0000112222222233 3789
Q ss_pred CceEEEEEEEeeCCCC--CeEEEEEEC--CEEcc----------------CCCcEEEEEE--cCeEEEEEcCCCCcccEE
Q psy2166 218 GEIAHFEASLIPVGDQ--TMTVEFLYN--GKPIE----------------ASHRIRTVHA--FGMVVLEILGTKIEDTGV 275 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p--~~~i~W~k~--g~~l~----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~ 275 (805)
|++++|.|.+. +.| .+.+.|+|+ +..+. ...++....+ .....|.|.+++.+|+|.
T Consensus 137 G~~v~L~C~~~--g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 214 (242)
T 2znx_A 137 SQTLSLTCSVT--GDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTAT 214 (242)
T ss_dssp TSCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCeEEEEEEEE--ccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEE
Confidence 99999999984 443 578999994 33221 1334444332 245789999999999999
Q ss_pred EEEEEEcC
Q psy2166 276 YTCRATNK 283 (805)
Q Consensus 276 Y~C~~~n~ 283 (805)
|+|.|.|.
T Consensus 215 Y~C~a~~~ 222 (242)
T 2znx_A 215 YYCANXDG 222 (242)
T ss_dssp EEEEETTS
T ss_pred EEEeccCC
Confidence 99999873
No 280
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.71 E-value=2.9e-15 Score=174.21 Aligned_cols=415 Identities=13% Similarity=0.088 Sum_probs=236.9
Q ss_pred CCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCC-CCcccEEEEEEEEcCCeeEEEEEEEE
Q psy2166 216 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGT-KIEDTGVYTCRATNKWGQAEISVNLE 294 (805)
Q Consensus 216 ~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n~~g~~~~~~~l~ 294 (805)
..+..+.|.|.+ .|.|.+.+.|.|+|..+..-.. ..|.|..+ ..+..+.|.|.+.+..|..... .+.
T Consensus 89 ~~~g~l~v~c~~--~g~P~p~i~W~k~g~~~~~~~~---------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~ 156 (731)
T 2v5y_A 89 SPPGLLNVYVKV--NNGPLGNPIWNISGDPTRTWNR---------AELAISTFWPNFYQVIFEVITSGHQGYLAID-EVK 156 (731)
T ss_dssp SCSEEEEEEEEE--TTCCCCSEEEEECCCCCSSCEE---------EEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBE
T ss_pred CCcceEEEEEec--CCCCccceeEEEeCCcCCceeE---------EEEEEeecCCCceEEEEEEEecCCceEEEEe-eEE
Confidence 345678888887 7999999999999987643221 24566554 3344588999887777765432 223
Q ss_pred EeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEE-EE--ECCEEccCCCceEEEEeCcEEEEEEcccCc
Q psy2166 295 CVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVE-WF--HNGKPIFHKNRVKMVSDFGFVVMDIAYVQS 371 (805)
Q Consensus 295 v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~-W~--~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~ 371 (805)
+.......+|.+. .+... .+.+|+.++|.|.+. |.|.+.+. |+ ++|+.+.......+........|.|.++..
T Consensus 157 ~~~~~~~~~p~~~-~~~~~-~v~~G~~v~l~C~~~--g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~ 232 (731)
T 2v5y_A 157 VLGHPCTRTPHFL-RIQNV-EVNAGQFATFQCSAI--GRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTK 232 (731)
T ss_dssp EESSCCSSSCEEC-CCCCE-EEETTSCEEEEEEEE--SCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCT
T ss_pred eeecccccccccc-cccce-EEeCCCcEEEEEEeC--CCCCCceeEEEecCCCccccccceEEeccccceEEEEEccccc
Confidence 3332233566665 34443 488999999999998 88888887 77 678776433211111111235799999999
Q ss_pred CCceEEEEEEEeCcee-eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeec
Q psy2166 372 HDSGEYVCRAWNKYGE-DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLK 450 (805)
Q Consensus 372 ~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (805)
.|.|.|+|.|.|..|. ....+.|.|..+|..
T Consensus 233 ~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~------------------------------------------------ 264 (731)
T 2v5y_A 233 RDAGKYRCMIRTEGGVGISNYAELVVKEPPVP------------------------------------------------ 264 (731)
T ss_dssp TTCEEEEEEEEETTEEEECCCEEEEEECCCCB------------------------------------------------
T ss_pred ccCeEEEEEEECCCCCcceeeEEEEEecCCCC------------------------------------------------
Confidence 9999999999999998 666677877644321
Q ss_pred CCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeC-C-CCCc
Q psy2166 451 EGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPV-T-DPDL 528 (805)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~-g-~p~~ 528 (805)
..+|.+. ......+.|.|..... | .|..
T Consensus 265 ------------------------------------------~~~p~~~--------~~~~~~v~l~w~~~~~~g~~~i~ 294 (731)
T 2v5y_A 265 ------------------------------------------IAPPQLA--------SVGATYLWIQLNANSINGDGPIV 294 (731)
T ss_dssp ------------------------------------------SSCCEEE--------EECSSCEEEECCCSSBSSCSCCC
T ss_pred ------------------------------------------CCCccee--------ccCCceEEEEeCCcccCCCCccE
Confidence 1223322 1234567888875311 1 2222
Q ss_pred --EEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEE--cCCcceEEEEEEEEeeeee--------e--
Q psy2166 529 --VVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT--NKYGSDVTKASLKCVSKTN--------L-- 594 (805)
Q Consensus 529 --~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~--n~~g~~~~~~~l~V~~~~~--------~-- 594 (805)
.+.|.+.+. ............+.|.++...+...|+|.|. |..|....+..+.+...+. +
T Consensus 295 ~Y~v~~~~~~~------~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~~ 368 (731)
T 2v5y_A 295 AREVEYCTASG------SWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEV 368 (731)
T ss_dssp EEEEEEEESSS------SCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEEE
T ss_pred EEEEEEEECCC------CceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeEE
Confidence 566665421 1111122222468999998888889999999 9999765433333332111 1
Q ss_pred -eecCCCCeEEEEECCEEcc--------------C-CCceE-----EEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcce
Q psy2166 595 -ILESQLPEVEWFYNGKKLP--------------H-GHRYR-----TFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653 (805)
Q Consensus 595 -~~~~~~p~v~W~~~g~~l~--------------~-~~~~~-----~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 653 (805)
.+....-.++|........ . +.... +........+.|.++.....+.|++.|.|..|..
T Consensus 369 ~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s 448 (731)
T 2v5y_A 369 VEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRK 448 (731)
T ss_dssp EEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEE
T ss_pred EeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCC
Confidence 0111122667765321100 0 00000 0111223457889999999999999999999986
Q ss_pred EEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccC-CCCeEEEEEEEeecCCC---C--eEEE
Q psy2166 654 VTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLS-EGEIAHFEASLIPVGDQ---T--MTVE 727 (805)
Q Consensus 654 ~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~-~G~~~~l~C~~~~~g~p---~--~~v~ 727 (805)
. +..+.+.... ..|. .+|.+ .. .+. ....+.|.-..- ..+ . -.|.
T Consensus 449 ~-S~~~~~~T~~------~~P~--------------~p~~~-----~~-~~~~~~~si~l~W~~P--~~~~g~i~~Y~V~ 499 (731)
T 2v5y_A 449 E-SQELIVQTDE------DLPG--------------AVPTE-----SI-QGSTFEEKIFLQWREP--TQTYGVITLYEIT 499 (731)
T ss_dssp E-CCCEEEECCC------CCCC--------------CCCTT-----TC-EEEEETTEEEEECCCC--SCCSSCCCEEEEE
T ss_pred C-CceEEEEccC------CCCC--------------CCCcc-----eE-EeeecCCeEEEEEcCC--CCCCCCccceEEE
Confidence 4 4444444311 0010 11100 11 111 133444443321 100 0 1344
Q ss_pred EEECCEE---ccC-CCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEE
Q psy2166 728 FLYNGKP---IEA-SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 779 (805)
Q Consensus 728 W~~~g~~---l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 779 (805)
|...+.. +.. .....+........+.|.++.....-.++..|.|..|....+
T Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s 555 (731)
T 2v5y_A 500 YKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA 555 (731)
T ss_dssp EEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE
T ss_pred EEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc
Confidence 4432211 111 111122233334468899999988888999999999966555
No 281
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.71 E-value=4.7e-17 Score=162.28 Aligned_cols=177 Identities=13% Similarity=0.113 Sum_probs=118.9
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEE----------------CCEecCCC---CceEEEec-CcEEEEEEcccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF----------------NGKPLELG---SRFKTTAD-FGFVTLDLTEVY 132 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k----------------~g~~i~~~---~~~~~~~~-~~~~~L~I~~~~ 132 (805)
+..+.+.+|+.++|.|.+. +.+.+.|.|+| ++...... .|+.+..+ .+.++|.|.+++
T Consensus 8 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 85 (246)
T 4dzb_B 8 PSWVISKSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAH 85 (246)
T ss_dssp CSEEEEETTSCEEEEEEES--SSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCC
T ss_pred CcEEEEeCCCcEEEEeEec--CCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCC
Confidence 3467899999999999998 56888999999 43333332 57776653 467799999999
Q ss_pred cCCCeEEEEEEEeCCe----eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 133 DRDQGIYTCRAWNLAG----ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
.+|+|.|+|.+.+..+ .......|.|..... ...+|.+...
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-----------------------------------~~~~P~i~~~ 130 (246)
T 4dzb_B 86 PEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLK-----------------------------------NVFPPEVAVF 130 (246)
T ss_dssp GGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGG-----------------------------------GCBCCEEEEE
T ss_pred HHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCC-----------------------------------cccCCceEee
Confidence 9999999999987643 222344566653110 0123544433
Q ss_pred cccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-------EcC----eEEEEEcCCCCcc-cEEE
Q psy2166 209 FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-------AFG----MVVLEILGTKIED-TGVY 276 (805)
Q Consensus 209 ~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~-------~~~----~~~L~i~~~~~~d-~G~Y 276 (805)
......+.+|+.++|.|.+.....+...+.|+|+|..+.......... .++ .+.|.|.....+| +|.|
T Consensus 131 ~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~Y 210 (246)
T 4dzb_B 131 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 210 (246)
T ss_dssp CCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEE
T ss_pred cCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeE
Confidence 322223567999999999843222234999999999987542211100 122 1358888888888 9999
Q ss_pred EEEEEcCCee
Q psy2166 277 TCRATNKWGQ 286 (805)
Q Consensus 277 ~C~~~n~~g~ 286 (805)
+|.|.|....
T Consensus 211 tC~v~~~~~~ 220 (246)
T 4dzb_B 211 RCQVQFYGLS 220 (246)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEecCCC
Confidence 9999987544
No 282
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.71 E-value=3.4e-17 Score=160.42 Aligned_cols=180 Identities=18% Similarity=0.246 Sum_probs=122.3
Q ss_pred ccCCCceEEEEEEEeeCCCC-----CeEEEEEECCEEc-------------cCCCcEEEEE---EcCeEEEEEcCCCCcc
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ-----TMTVEFLYNGKPI-------------EASHRIRTVH---AFGMVVLEILGTKIED 272 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p-----~~~i~W~k~g~~l-------------~~~~~~~~~~---~~~~~~L~i~~~~~~d 272 (805)
.+.+|+.++|.|.+ .+.| .+.+.|++++... ....++.... ..+...|.|.+++.+|
T Consensus 6 ~~~~G~~v~L~C~~--~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 6 VALVDTDATLRCSF--SPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCTTSCEEECCBC--CCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred EEECCCCeEEEEEe--cCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 47899999999988 4443 3899999987432 1112222211 1124679999999999
Q ss_pred cEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEE-CCEEccCCC
Q psy2166 273 TGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHKN 351 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~-~g~~l~~~~ 351 (805)
+|.|+|.+.+. +..+..+.|.|...+ ..|.+...+.. .+.+|+.++|.|.+.. +.|.+.+.|++ ++..+....
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~--~~p~i~~~~~~--~v~~G~~~~l~C~~~~-g~P~~~v~W~~~~~~~~~~~~ 157 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPY--SKPSMTLEPNK--DLRPGNMVTITCSSYQ-GYPEAEVFWKDGQGVPLTGNV 157 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCC--CCCEEECCC-------CCSEEEEEEEEEE-EBSCCEEEEECTTSCBCCSEE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCC--CCCcEEeCCCc--eecCCceEEEEEeccc-ccCCCeEEEEcCCCccCCCCc
Confidence 99999999985 333444555554321 34555544332 3778999999999942 78889999999 566654332
Q ss_pred ceEEEEe--CcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEeccc
Q psy2166 352 RVKMVSD--FGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGG 401 (805)
Q Consensus 352 ~~~~~~~--~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 401 (805)
....... +....|.|.++..+|+|.|+|.|.|..|.....+.|.|.++|.
T Consensus 158 ~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 158 TTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp EEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC---
T ss_pred ceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCcc
Confidence 2222222 2334588999999999999999999999999999999877653
No 283
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.71 E-value=1e-17 Score=163.97 Aligned_cols=179 Identities=13% Similarity=0.142 Sum_probs=122.8
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCc----eEEEEECCEecC-------------CCCceEEEe-----cCcEEEEEEc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNL----KIEWIFNGKPLE-------------LGSRFKTTA-----DFGFVTLDLT 129 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~----~v~W~k~g~~i~-------------~~~~~~~~~-----~~~~~~L~I~ 129 (805)
.+..+.+.+|+.++|.|.+.+ +.+.+ .|.|+|++.... ...|+.+.. ..+..+|.|.
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~-~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~ 83 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQV-PNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMF 83 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCC-CSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECC
T ss_pred CCCcEEEEeCCCEEEEeeecc-CCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEc
Confidence 344678899999999999963 23333 499999864221 145666654 2235589999
Q ss_pred ccccCCCeEEEEEEEeCC-eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 130 EVYDRDQGIYTCRAWNLA-GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 130 ~~~~~D~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
+++.+|+|.|+|.+.+.. +.....+.|.|.. +|.+...
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~-----------------------------------------~P~~~~~ 122 (221)
T 3eow_R 84 GLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLA-----------------------------------------KPQNTAE 122 (221)
T ss_dssp CSSCCCCSCBEEEEEESSSCSCEEECCCCCCC-----------------------------------------CCEEEEE
T ss_pred cCChHHCeEEEEEEEeCCCCceEEEEEEEEEE-----------------------------------------CCCceee
Confidence 999999999999999875 6666666666543 3444433
Q ss_pred cccccccCCCceE-EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEE---cCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 209 FQHLSNLSEGEIA-HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA---FGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 209 ~~~~~~v~~g~~~-~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
+... ..+|+.+ .|.|.+. .+.|.+.+.|++++.............. ...+.|.|.++..+|+|.|+|.|.|..
T Consensus 123 ~~~~--~~~g~~~~~l~C~~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~ 199 (221)
T 3eow_R 123 VQKV--QLTGEPVPMARCVST-GGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHES 199 (221)
T ss_dssp EECC--CCCSSSCCEEEEEEE-SCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSC
T ss_pred cCCc--ccCCceEEEEEEECC-CccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCC
Confidence 3332 2578888 5999974 4888899999997554332211100001 114679999999999999999999988
Q ss_pred eeEEEEEEEEE
Q psy2166 285 GQAEISVNLEC 295 (805)
Q Consensus 285 g~~~~~~~l~v 295 (805)
+.....+.+..
T Consensus 200 ~~~~~~~~v~~ 210 (221)
T 3eow_R 200 FEKPQLLTVSL 210 (221)
T ss_dssp SSSCEEEEECC
T ss_pred CCCCeEEEEEE
Confidence 77666665543
No 284
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.70 E-value=1.5e-16 Score=158.76 Aligned_cols=184 Identities=9% Similarity=0.065 Sum_probs=115.5
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCce-----EEEEECCEecCC--------CC-------ceEEE---ecCc
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLK-----IEWIFNGKPLEL--------GS-------RFKTT---ADFG 122 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~-----v~W~k~g~~i~~--------~~-------~~~~~---~~~~ 122 (805)
|.+.+..+..+.+.+|++++|.|.+. +.|.+. |.|+|++..... +. +..+. ...+
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~--g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIF--YSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSG 80 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEE--ESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTT
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEe--cCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCC
Confidence 33444455567899999999999998 455444 999996432211 00 11110 0123
Q ss_pred EEEEEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCC
Q psy2166 123 FVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRP 202 (805)
Q Consensus 123 ~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (805)
..+|.|.+++.+|+|.|+|.+.+..+.......|.|..++
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P---------------------------------------- 120 (248)
T 3pv7_A 81 DASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASP---------------------------------------- 120 (248)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC----------------------------------------
T ss_pred cEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCC----------------------------------------
Confidence 4469999999999999999999998888888888887543
Q ss_pred CceecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCc------E-EEEE-EcC----eEEEEEcCCC
Q psy2166 203 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHR------I-RTVH-AFG----MVVLEILGTK 269 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~------~-~~~~-~~~----~~~L~i~~~~ 269 (805)
.+...+.. .+..|+.+.|.|.+. .+.|.+ .+.|+++|..+..... . .... .++ ...|.|....
T Consensus 121 -~v~~~~~~--~~~~~~~~~L~C~~~-g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~ 196 (248)
T 3pv7_A 121 -ASRLLLDQ--VGMKENEDKYMCESS-GFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQ 196 (248)
T ss_dssp -EEEEECC----------CEEEEEEE-EEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--C
T ss_pred -ceEEecCC--ccccCCCcEEEEEEc-cEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCcc
Confidence 33322222 245678888999984 226777 9999999975542210 0 1111 111 3578899999
Q ss_pred CcccEEEEEEEEcCCeeE--EEEEEEEE
Q psy2166 270 IEDTGVYTCRATNKWGQA--EISVNLEC 295 (805)
Q Consensus 270 ~~d~G~Y~C~~~n~~g~~--~~~~~l~v 295 (805)
.+|.|.|+|.|.|..+.. ...+.|.|
T Consensus 197 ~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 197 EDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 999999999999988764 44555554
No 285
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.70 E-value=2.4e-16 Score=157.98 Aligned_cols=189 Identities=12% Similarity=0.117 Sum_probs=118.0
Q ss_pred cCCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee-------------cCCCCceEEE--ecCcEEEEEEccccc
Q psy2166 71 PLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP-------------LELGSRFKTT--ADFGFVTLDLTEVYD 133 (805)
Q Consensus 71 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~-------------i~~~~~~~~~--~~~~~~~L~I~~~~~ 133 (805)
..+..+.+.+|++++|.|.+. +.|.+.|.|+|.. .. .....|+.+. ......+|.|.+++.
T Consensus 8 q~p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 85 (256)
T 3tf7_C 8 QPDARVTVSEGASLQLRCKYS--YSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHR 85 (256)
T ss_dssp CSCSEEEEETTSCEEECCEEE--CSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCG
T ss_pred ecCceEEecCCCeEEEEEEeC--CCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCc
Confidence 344478899999999999998 5688899999832 11 1124466663 345677999999999
Q ss_pred CCCeEEEEEEEeCCee----EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 134 RDQGIYTCRAWNLAGE----TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
+|+|.|+|.+.|..+. ....+.|.|.......... .+ ..........+|.+...+
T Consensus 86 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~-~~--------------------~~~~~~~~~~~~~v~~~p 144 (256)
T 3tf7_C 86 SDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGG-GS--------------------GGGGSGGGGSEAAVTQSP 144 (256)
T ss_dssp GGCSEEEEEEECTTCTTCEEECCCEEEEEEC------------------------------------------CCEEESC
T ss_pred ccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCC-Cc--------------------CcccCCCCcCccEEEecC
Confidence 9999999999987542 2223456665311000000 00 000000011345566555
Q ss_pred ccccccCCCceEEEEEEEeeCCCCCeEEEEEECC--EEc---c------------CCCcEEEEE-EcCeEEEEEcCCCCc
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--KPI---E------------ASHRIRTVH-AFGMVVLEILGTKIE 271 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g--~~l---~------------~~~~~~~~~-~~~~~~L~i~~~~~~ 271 (805)
... .+.+|+.++|.|.+ .+. .+.+.|||.. ..+ . ...++.... ......|.|.+++.+
T Consensus 145 ~~~-~v~~G~~v~L~C~~--~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 220 (256)
T 3tf7_C 145 RNK-VTVTGENVTLSCRQ--TNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPS 220 (256)
T ss_dssp SEE-EEETTCCEEECEEE--CSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGG
T ss_pred CEE-EEeCCCcEEEEEEc--CCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHH
Confidence 554 36799999999998 444 5689999832 111 0 012222221 223568999999999
Q ss_pred ccEEEEEEEEcCCee
Q psy2166 272 DTGVYTCRATNKWGQ 286 (805)
Q Consensus 272 d~G~Y~C~~~n~~g~ 286 (805)
|+|.|+|.|.|..|.
T Consensus 221 DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 221 QTSLYFCASSDAPGQ 235 (256)
T ss_dssp GCEEEEEEEEEETTE
T ss_pred HCEEEEEEecCCCCc
Confidence 999999999987654
No 286
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=2.6e-17 Score=162.71 Aligned_cols=174 Identities=14% Similarity=0.191 Sum_probs=118.7
Q ss_pred cccCCCeEEEEEEEeecCCC-Cc-EEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEE
Q psy2166 315 GLKDGDSAHFECTLTPVNDP-EL-KVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 378 (805)
Q Consensus 315 ~~~~g~~~~l~C~~~~~~~p-~~-~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 378 (805)
.+.+|+.++|.|.+. +.+ .+ .+.|+|++ ..+ ....++..........|.|.+++.+|+|.|.
T Consensus 30 ~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 107 (234)
T 2j6e_L 30 SGTPGQRVTISCSGS--SSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYY 107 (234)
T ss_dssp CBCTTCEEEEEEECC--TTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEE
T ss_pred EeeCCCcEEEEEEec--CCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEE
Confidence 388999999999997 433 34 79999863 222 1134666666667778999999999999999
Q ss_pred EEEEeCceee---EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceE
Q psy2166 379 CRAWNKYGED---FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA 455 (805)
Q Consensus 379 C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (805)
|.+.|..+.. ...+.|.|..
T Consensus 108 C~~~~~~~~~~~~~~~~~l~V~~--------------------------------------------------------- 130 (234)
T 2j6e_L 108 CATWDDSLSAVIFGGGTKLTVLG--------------------------------------------------------- 130 (234)
T ss_dssp EEEEETTTTEEEECCCBCCCBCC---------------------------------------------------------
T ss_pred EEEEcCCcceeEecCCEEEEEec---------------------------------------------------------
Confidence 9999987621 1112222210
Q ss_pred EEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEEEE
Q psy2166 456 HFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEWFY 534 (805)
Q Consensus 456 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W~~ 534 (805)
....+|.+....+... ..+|+.++|.|.+.+. .|+ +.|+|+|
T Consensus 131 -----------------------------------~~~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~-~p~~~~v~W~k 173 (234)
T 2j6e_L 131 -----------------------------------QPKAAPSVTLFPPSSE-ELQANKATLVCLISDF-FPGAVTVAWKA 173 (234)
T ss_dssp -----------------------------------CCCCCCCCCEECCCHH-HHTTSCCCEEECCCBC-SSCCCEEEEEE
T ss_pred -----------------------------------CCCCCCcccccCCChh-HhcCCceEEEEEEEEE-cCCceEEEEEE
Confidence 0124566655444433 4468999999999952 343 5999999
Q ss_pred CCEEccCCCceE-E--EeeC---CEEEEEEccCCCCCCEEEEEEEEcCCcceEEEE
Q psy2166 535 NGKKLPHGHRYR-T--FHDF---GIVILDILYCYEENSGVYECRATNKYGSDVTKA 584 (805)
Q Consensus 535 ~g~~l~~~~~~~-~--~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 584 (805)
||+.+..+.... . ..++ ..+.|.|..+..+|+|.|+|.|.|..+....++
T Consensus 174 ~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 174 DGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp TTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred CCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 999986542110 0 1111 235799999999999999999999987755443
No 287
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.70 E-value=7e-17 Score=156.01 Aligned_cols=181 Identities=13% Similarity=0.107 Sum_probs=113.4
Q ss_pred CeEEecCCCCce-ecCCCcEEEEEEEecCC-CC-CceEEEEECCEecCCCCc-eEEEecC----cEEEEEEcccccCCCe
Q psy2166 66 PVFIVPLKPEFK-LGEAQPLHLEAQVEPKN-DP-NLKIEWIFNGKPLELGSR-FKTTADF----GFVTLDLTEVYDRDQG 137 (805)
Q Consensus 66 p~~~~~~~~~~~-v~~G~~v~L~C~~~~~~-~p-~~~v~W~k~g~~i~~~~~-~~~~~~~----~~~~L~I~~~~~~D~G 137 (805)
|.+.+..+.... +.+|+.++|.|.+.+.. .| .+.|.|+|++..+..... +.....+ ...+|.|.+++.+|+|
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 81 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTC
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCC
Confidence 444444443444 89999999999998432 13 459999999987653210 0000111 1247999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.|.|..+.......+.+.. ....+|.+...+.... ..+
T Consensus 82 ~Y~C~a~~~~~~~~~~~~v~~~~-------------------------------------~~~~~P~v~~~~~~~~-~~~ 123 (207)
T 2vol_A 82 EFKCRVNSAAFPAPIEKTISKTK-------------------------------------GRPKAPQVYTLPPPKE-QMA 123 (207)
T ss_dssp CEEEEEECTTCSSCEEEEECCCC-------------------------------------CCCBCCEEEEECCCTG-GGS
T ss_pred EEEEEEEccCCCCceEEEeccCC-------------------------------------CCCcCCeEEEeCCCHH-Hhc
Confidence 99999999876532222222100 0114566554444332 236
Q ss_pred CceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE-EEEEcC----eEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 218 GEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR-TVHAFG----MVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~-~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
|+.++|.|.+.. .+|. +.+.|+|+|..+....... ....++ .+.|.|.....+|.|.|+|.|.|...
T Consensus 124 g~~~~L~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 124 KDKVSLTCMITD-FFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp SSEEEEEEEEEE-EBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred CCceEEEEEEee-EECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 999999999852 2444 5999999999875432111 112222 23466766666789999999999764
No 288
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.70 E-value=2.8e-15 Score=141.35 Aligned_cols=239 Identities=15% Similarity=0.213 Sum_probs=158.7
Q ss_pred CceecCCCcEEEEEEEecCCCC---CceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDP---NLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETF 151 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p---~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 151 (805)
...+..|+.++|.|.+.+ |.| ...++|+|||..+..... .|.|..+...|+|.|+|.+.+..|...
T Consensus 11 ~~~i~~GdsVTLTatVaG-GkP~pspyTYqWyKDG~~IsGaT~----------tLti~s~t~sdSG~YqCvVTDa~Gcs~ 79 (304)
T 3shs_A 11 KRCFLAGDGFTLTATVAG-DEPLPSNLTYTWTKDDQPHENNTA----------TLTVADATSENAGSYKVTVQDTDTMTS 79 (304)
T ss_dssp CSSBCTTCCEEEEEEEEE-SSSCCCCEEEEEEETTEECSCCSS----------EEEESSCCGGGCEEEEEEEEETTTCCE
T ss_pred CccccCCCCEEEEEEecC-CCCCCCCceEEEEECCccccCCcc----------eEEeeeccccCCeEEEEEEEECCCCee
Confidence 567899999999999985 566 568999999988764322 689999999999999999999888766
Q ss_pred EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEee-C
Q psy2166 152 TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIP-V 230 (805)
Q Consensus 152 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~-~ 230 (805)
....+.|.....+ .+....+....+..|..+.|.+.+.. .
T Consensus 80 tSs~VtVT~~a~l---------------------------------------~i~it~P~s~~vssg~sVtL~aTVt~SG 120 (304)
T 3shs_A 80 VESEVFLMEEAEL---------------------------------------IVNITEPQHFYVSSQTDVELHATVKFSG 120 (304)
T ss_dssp EECCCEEECBCCE---------------------------------------EEEESSCSEEEECSSCCEEEEEEEEETT
T ss_pred eeeeEEEeccCce---------------------------------------eEEecCCCceeccCCCeEEEEEEEeccC
Confidence 5555555543221 11111111112456788899887732 2
Q ss_pred CCC-----CeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCee--EEEEEEEEEeccCCCCC
Q psy2166 231 GDQ-----TMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ--AEISVNLECVDKSKGQP 303 (805)
Q Consensus 231 ~~p-----~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~--~~~~~~l~v~~~~~~~~ 303 (805)
|.| ..+++|||++..+.... .|++......++|.|+|++.|..+. ++.++.+.+...
T Consensus 121 GtppA~~~~yTYQWyKngt~IsgAq-----------~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~----- 184 (304)
T 3shs_A 121 GKTPADNYELHYSWSKGEDVIDTTQ-----------DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATM----- 184 (304)
T ss_dssp SCCSSTTCCCEEEEEETTEEEESSS-----------EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEE-----
T ss_pred CCCcccCCCceeEEeeCCeEccCcc-----------ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEcc-----
Confidence 344 57999999998875443 4777788999999999999998652 455555555321
Q ss_pred CeEEecCCCcccccCCCeEEEEEEEee------cCCCCc--EEEEEE--CCEEcc----C-----CCceEEEEeCcEEEE
Q psy2166 304 PKFTSHIKSLEGLKDGDSAHFECTLTP------VNDPEL--KVEWFH--NGKPIF----H-----KNRVKMVSDFGFVVM 364 (805)
Q Consensus 304 p~~~~~~~~~~~~~~g~~~~l~C~~~~------~~~p~~--~v~W~~--~g~~l~----~-----~~~~~~~~~~~~~~l 364 (805)
.+....-....+..|+.+.|.-.+.. .|.|.. ++.|+. .|+.-. . -..+.+..+++ |
T Consensus 185 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 260 (304)
T 3shs_A 185 -NVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH---L 260 (304)
T ss_dssp -EEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSC---E
T ss_pred -ccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCcc---e
Confidence 12222222223778999998766542 244543 467874 343211 1 12344444443 5
Q ss_pred EEcccCcCCceEEEEEEEe
Q psy2166 365 DIAYVQSHDSGEYVCRAWN 383 (805)
Q Consensus 365 ~i~~v~~~d~G~Y~C~a~n 383 (805)
.-.....+|...|.|.+..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 261 FKESATYDDTAKFWCVAKL 279 (304)
T ss_dssp EESSCCGGGCEEEEEEEEE
T ss_pred eecccccccchheeeHHHH
Confidence 5567788999999999964
No 289
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.70 E-value=8.3e-17 Score=161.01 Aligned_cols=168 Identities=17% Similarity=0.199 Sum_probs=118.9
Q ss_pred ccCCCeEEEEEEEeecCCC-----CcEEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceE
Q psy2166 316 LKDGDSAHFECTLTPVNDP-----ELKVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p-----~~~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 376 (805)
+.+|++++|.|.+. +.+ .+.|.|+|++ ..+ ....++.+...++...|.|.+++.+|+|.
T Consensus 46 v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 123 (252)
T 3bkj_L 46 VNLGEQASISCRSS--QSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGV 123 (252)
T ss_dssp ECTTSCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EeCCCcEEEEEEcC--CCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEE
Confidence 78999999999997 665 5899999854 111 11346766666777889999999999999
Q ss_pred EEEEEEeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceE
Q psy2166 377 YVCRAWNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA 455 (805)
Q Consensus 377 Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (805)
|.|.+.|..+... ....|.|...
T Consensus 124 Y~C~~~~~~~~~~~~~~~l~V~~~-------------------------------------------------------- 147 (252)
T 3bkj_L 124 YYCFQASLVPLTFGAGTKLELKRA-------------------------------------------------------- 147 (252)
T ss_dssp EEEEECSBSSCEECCCEEEEECCC--------------------------------------------------------
T ss_pred EEEEEEcCCccEECCCEEEEEeCC--------------------------------------------------------
Confidence 9999988765322 2234554211
Q ss_pred EEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEEEE
Q psy2166 456 HFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEWFY 534 (805)
Q Consensus 456 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W~~ 534 (805)
..+|.+....+... +.+|+.++|.|.+.+. .|. +.|+|+|
T Consensus 148 -------------------------------------~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~-~p~~~~v~W~k 188 (252)
T 3bkj_L 148 -------------------------------------DAAPTVSIFPPSSE-QLTSGGASVVCFLNNF-YPKDINVKWKI 188 (252)
T ss_dssp -------------------------------------CBCCEEEEECCCHH-HHHHTEEEEEEEEEEE-BSSCCEEEEEE
T ss_pred -------------------------------------CcCcEEEEeCCChh-hcCCCcEEEEEEEeeE-eCCCcEEEEEE
Confidence 24566666544443 4579999999999963 444 4899999
Q ss_pred CCEEccCCCceE--E-EeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcce
Q psy2166 535 NGKKLPHGHRYR--T-FHDFG----IVILDILYCYEENSGVYECRATNKYGSD 580 (805)
Q Consensus 535 ~g~~l~~~~~~~--~-~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 580 (805)
||+.+..+.... . ...++ .+.|.|..+..+|+|.|+|.|.|.....
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 189 DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp TTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred CCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 999886541111 0 11111 2469999999999999999999987654
No 290
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.70 E-value=7.3e-17 Score=163.29 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=114.4
Q ss_pred CCcccEEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCcEEEEEEC--CEE
Q psy2166 269 KIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHN--GKP 346 (805)
Q Consensus 269 ~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~ 346 (805)
...|.+.|.|.+.+..|.......+.|.. .+... .+.+|++++|.|.+. .+.+.+.|+|. +..
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~~~~~v~~-----------~p~~v-~v~~G~~v~L~C~~~---~~~~~v~W~k~~~~~~ 68 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGGGGMKVIQ-----------TPRYL-VKGQGQKAKMRCIPE---KGHPVVFWYQQNKNNE 68 (270)
T ss_dssp ------------------------CCCEE-----------ECSEE-EEETTSCEEEEEECC---TTCCEEEEEEECTTCC
T ss_pred hhhhHHHHHHHHhccCCccccccceeEEe-----------CCCeE-EEcCCCCEEEEEEec---CCCceEEEEEECCCCC
Confidence 56789999999999877655444433332 12222 278999999999984 36789999982 211
Q ss_pred c------------cCC---C-ceEEEE-eCcEEEEEEcccCcCCceEEEEEEEeCce----eeEEEEEEEEEeccccccc
Q psy2166 347 I------------FHK---N-RVKMVS-DFGFVVMDIAYVQSHDSGEYVCRAWNKYG----EDFTRATIKCFGKGGVYLD 405 (805)
Q Consensus 347 l------------~~~---~-~~~~~~-~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~ 405 (805)
. ... . ++.+.. ..+...|.|.+++.+|+|.|.|.+.+..+ .....+.|.|....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----- 143 (270)
T 3qib_D 69 FKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDL----- 143 (270)
T ss_dssp EEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCS-----
T ss_pred cEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcccc-----
Confidence 0 000 0 444433 23456899999999999999999986421 22223455554210
Q ss_pred CCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCc
Q psy2166 406 SLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQP 485 (805)
Q Consensus 406 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 485 (805)
T Consensus 144 -------------------------------------------------------------------------------- 143 (270)
T 3qib_D 144 -------------------------------------------------------------------------------- 143 (270)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-EEEEEECCEEccCCCceEE-------E-eeCC---E
Q psy2166 486 VAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-VVEWFYNGKKLPHGHRYRT-------F-HDFG---I 553 (805)
Q Consensus 486 ~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~v~W~~~g~~l~~~~~~~~-------~-~~~~---~ 553 (805)
....+|.+....+....+.+|+.++|.|.+.+. .|.+ .++|+|||+.+..+.+... . .++. .
T Consensus 144 -----~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~-~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (270)
T 3qib_D 144 -----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGF-YPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALS 217 (270)
T ss_dssp -----TTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE-BSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEE
T ss_pred -----ccccCCceEEECCCccccccCCceEEEEEecce-eCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEE
Confidence 112456666544444346679999999999952 5555 8999999999965421110 0 1121 2
Q ss_pred EEEEEccCCCCC-CEEEEEEEEcCCcc
Q psy2166 554 VILDILYCYEEN-SGVYECRATNKYGS 579 (805)
Q Consensus 554 ~~L~i~~v~~~d-~G~Y~C~a~n~~g~ 579 (805)
+.|.|.....+| .|.|+|.|.|....
T Consensus 218 s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 218 SRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred EEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 357888877777 99999999987654
No 291
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.70 E-value=6.8e-17 Score=158.58 Aligned_cols=93 Identities=8% Similarity=0.006 Sum_probs=58.9
Q ss_pred CCeeeecCCcccccCCCCeEEEEEEEeecCC-CCe-EEEEEECCEEccC--CCCeEEEeeC---cEEEEEEcCCCCCCCE
Q psy2166 691 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-QTM-TVEFLYNGKPIEA--SHRIRTVHAF---GMVVLEILGTKIEDTG 763 (805)
Q Consensus 691 ~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~~-~v~W~~~g~~l~~--~~~~~~~~~~---~~~~L~i~~v~~~d~G 763 (805)
+|.+....... .+.+|+.++|.|.+. |. |.+ .|+|+++|..+.. ...+ ...+ ....|.|..+..+| |
T Consensus 121 ~P~v~~~~~~~-~~~~g~~v~L~C~~~--g~~P~p~~v~W~~~g~~~~~~~~~~~--~~~g~~~~~s~L~i~~~~~~~-g 194 (227)
T 1mju_H 121 APSVYPLAPVC-GDTSGSSVTLGCLVK--GYFPEPVTLTWNSGSLSSGVHTFPAV--LQSDLYTLSSSVTVTSSTWPS-Q 194 (227)
T ss_dssp CCEEEEECCCC-------CEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCE--EETTEEEEEEEEEECTTTTTT-S
T ss_pred CCEEEEecCCc-cccCCCcEEEEEEee--cEeCCCeEEEEecCCCcCCcEECCce--ecCCeEEEEEEEEEchhhcCC-C
Confidence 45444433233 567899999999998 64 766 9999999986531 1111 1111 12469999999888 9
Q ss_pred EEEEEEEcCCccEEEEEEEEEEEeCC
Q psy2166 764 VYTCRATNKWGQAEISVNLECVVWSP 789 (805)
Q Consensus 764 ~Y~C~a~N~~G~~~~~~~l~V~~~~~ 789 (805)
.|+|.|.|..+.......+.+..+|+
T Consensus 195 ~Y~C~a~n~~~~~~~~~~~~~~~~p~ 220 (227)
T 1mju_H 195 SITCNVAHPASSTKVDKKIEPRGPTI 220 (227)
T ss_dssp CCEEEEEEGGGTEEEEEECCCCCC--
T ss_pred eEEEEEEECCCCcceEEEeCCCCCCC
Confidence 99999999988877777766554433
No 292
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.70 E-value=5.2e-17 Score=158.19 Aligned_cols=169 Identities=19% Similarity=0.246 Sum_probs=122.5
Q ss_pred CCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCC--CceEEEeeCCEEEEEEccCCCCCCEEE
Q psy2166 492 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVY 569 (805)
Q Consensus 492 ~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y 569 (805)
...+|.|. .+.. ..+.+|+.++|.|.+. |.|.|.++|+|+|..+..+ .++.+...+....|.|.++..+|+|.|
T Consensus 16 ~~~~P~~~-~p~~-~~~~~G~~v~l~C~~~--g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 91 (215)
T 3mtr_A 16 HMYAPKLQ-GPVA-VYTWEGNQVNITCEVF--AYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNY 91 (215)
T ss_dssp CCEEEEEE-CCSE-EEECTTCCEEEEEEEE--EESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEE
T ss_pred eecCCccc-CCce-EEEECCCCEEEEEEEe--ecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEE
Confidence 34677773 3344 4589999999999999 6788899999999999765 567777767778999999999999999
Q ss_pred EEEEEcCCcceEEEEEEEEeeeeee-------------eecC--C-------CC--eEEEEECCEEccCCCceEEEeeCC
Q psy2166 570 ECRATNKYGSDVTKASLKCVSKTNL-------------ILES--Q-------LP--EVEWFYNGKKLPHGHRYRTFHDFG 625 (805)
Q Consensus 570 ~C~a~n~~g~~~~~~~l~V~~~~~~-------------~~~~--~-------~p--~v~W~~~g~~l~~~~~~~~~~~~~ 625 (805)
+|.|.|..|.....+.|.|...|.. .+.+ | .. .+.|.+++........+.+.....
T Consensus 92 ~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~ 171 (215)
T 3mtr_A 92 NCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASM 171 (215)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHH
T ss_pred EEEEEECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccc
Confidence 9999999999999999988765431 1111 1 11 255555543211100000000011
Q ss_pred EEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeec
Q psy2166 626 IVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSK 664 (805)
Q Consensus 626 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 664 (805)
...|.|.++...+.|.|+|.|.|..|....+..+.|..+
T Consensus 172 ~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~ 210 (215)
T 3mtr_A 172 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQ 210 (215)
T ss_dssp HTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECC
T ss_pred cccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEec
Confidence 135999999999999999999999999888777777653
No 293
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.70 E-value=1.5e-16 Score=153.63 Aligned_cols=171 Identities=15% Similarity=0.154 Sum_probs=111.6
Q ss_pred ccCCCeEEEEEEEeecC-CC-CcEEEEEECCEEccCCCc-eEEEEeC----cEEEEEEcccCcCCceEEEEEEEeCceee
Q psy2166 316 LKDGDSAHFECTLTPVN-DP-ELKVEWFHNGKPIFHKNR-VKMVSDF----GFVVMDIAYVQSHDSGEYVCRAWNKYGED 388 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~-~p-~~~v~W~~~g~~l~~~~~-~~~~~~~----~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 388 (805)
+.+|++++|.|.+.+.. .| .+.|.|+|++..+..... ......+ ....|.|.++..+|+|.|+|.|.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 78999999999998422 13 459999999977642210 0000011 12369999999999999999999988753
Q ss_pred EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCC
Q psy2166 389 FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD 468 (805)
Q Consensus 389 ~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (805)
.....+.+
T Consensus 95 ~~~~~v~~------------------------------------------------------------------------ 102 (207)
T 2vol_A 95 PIEKTISK------------------------------------------------------------------------ 102 (207)
T ss_dssp CEEEEECC------------------------------------------------------------------------
T ss_pred ceEEEecc------------------------------------------------------------------------
Confidence 22222211
Q ss_pred ceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc--eE
Q psy2166 469 LVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR--YR 546 (805)
Q Consensus 469 ~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~--~~ 546 (805)
...+..+|.+........ ..+|+.++|.|.+.+...+.+.|+|+|||+.+..... ..
T Consensus 103 --------------------~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 161 (207)
T 2vol_A 103 --------------------TKGRPKAPQVYTLPPPKE-QMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPI 161 (207)
T ss_dssp --------------------CCCCCBCCEEEEECCCTG-GGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCE
T ss_pred --------------------CCCCCcCCeEEEeCCCHH-HhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCce
Confidence 011246777766554443 3469999999999963233359999999998854321 11
Q ss_pred EEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 547 TFHDFG---IVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 547 ~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
...++. .+.|.|.....+|.|.|+|.|.|....
T Consensus 162 ~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 162 MDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 122222 224677766667899999999998654
No 294
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=3.3e-16 Score=155.46 Aligned_cols=165 Identities=15% Similarity=0.200 Sum_probs=116.7
Q ss_pred ccCCCceEEEEEEEeeCCCC----CeEEEEEECC--EEc---c---------CCCcEEEEEEcCeEEEEEcCCCCcccEE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQ----TMTVEFLYNG--KPI---E---------ASHRIRTVHAFGMVVLEILGTKIEDTGV 275 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p----~~~i~W~k~g--~~l---~---------~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 275 (805)
.+.+|+.++|.|.+ .+.| .+.+.|||+. ..+ . ...++......+...|.|.+++.+|+|.
T Consensus 12 ~v~~G~~v~L~C~~--~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (240)
T 1moe_A 12 AVSLGQRATMSCRA--GESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVAT 89 (240)
T ss_dssp EECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EecCCCCEEEEEeC--CCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEE
Confidence 48899999999998 6676 7899999952 211 0 1346665555667799999999999999
Q ss_pred EEEEEEcCCee-EEEEEEEEEeccCCCCCCe-EEecCCCcccccCCCeEEEEEEEeecCCC--CcEEEEEEC--CEEcc-
Q psy2166 276 YTCRATNKWGQ-AEISVNLECVDKSKGQPPK-FTSHIKSLEGLKDGDSAHFECTLTPVNDP--ELKVEWFHN--GKPIF- 348 (805)
Q Consensus 276 Y~C~~~n~~g~-~~~~~~l~v~~~~~~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~~~~~p--~~~v~W~~~--g~~l~- 348 (805)
|+|.+.|..+. ......|.|...+...++. +...+... .+.+|+.++|.|.+. +.| .+.+.|+|+ +..+.
T Consensus 90 Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~-~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~ 166 (240)
T 1moe_A 90 YYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAE-LVEPGASVKLSCTAS--GFNIKDTYMHWVKQRPEQGLEW 166 (240)
T ss_dssp EEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCE-EECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEE
T ss_pred EEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCce-EEeCCCcEEEEEEEc--CccCCCCEEEEEEECCCCCcEE
Confidence 99999997554 3344566665433211232 33333333 388999999999998 555 468999995 32221
Q ss_pred ----------------CCCceEEEEe--CcEEEEEEcccCcCCceEEEEEEEe
Q psy2166 349 ----------------HKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCRAWN 383 (805)
Q Consensus 349 ----------------~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y~C~a~n 383 (805)
...++.+..+ ....+|.|.++..+|+|.|.|.|.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 167 IGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 1235555543 4556899999999999999999984
No 295
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.70 E-value=1.4e-16 Score=149.53 Aligned_cols=155 Identities=13% Similarity=0.152 Sum_probs=109.4
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC-CEecC------------CC--CceEEEecCcEEEEEEcccccCCCeEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN-GKPLE------------LG--SRFKTTADFGFVTLDLTEVYDRDQGIY 139 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~-g~~i~------------~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y 139 (805)
.+.+.+|++|+|.|.+.. ..+.+.|.|+|+ +..+. .. +|+.+...+ .+|.|.+++.+|+|.|
T Consensus 8 ~v~v~~G~~vtL~c~~~~-~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~--~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHP-LASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTN--GALRIYNVSKEDRGDY 84 (180)
T ss_dssp EEEEETTSCEEECCCSSC-CCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTT--CCEEECSCCGGGCEEE
T ss_pred eEEEEeCCCEEEeCCCCC-CCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCC--ccEEEcCCCHHHCeEE
Confidence 568899999999999852 345789999994 32221 11 466663222 3799999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 140 TCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 140 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
+|.+.+.. .......|.|..+. ..|.+.. .+.
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~--------------------------------------~~P~i~~---------~~~ 116 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMV--------------------------------------SKPMIYW---------ECS 116 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCC--------------------------------------CCCEEEE---------EGG
T ss_pred EEEEEcCC-eEEEEEEEEEECCC--------------------------------------CCCEEEe---------cCC
Confidence 99998776 55566677776432 2244332 235
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
.++|.|.+. .+ |.+.+.|+++|..+.. ....+|.+.. .+|+|.|+|.|.|..+.......+
T Consensus 117 ~v~L~C~~~-~g-p~p~i~W~~~~~~l~~---------~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 117 NATLTCEVL-EG-TDVELKLYQGKEHLRS---------LRQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp GTEEEEECS-SC-TTCEEEEEETTEEEEE---------ESSSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred CEEEEEEeC-CC-CCCEEEEEECCeECcC---------CCCCEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 689999873 24 8899999999998751 1123455533 789999999999998877665543
No 296
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.70 E-value=1.7e-16 Score=154.96 Aligned_cols=172 Identities=15% Similarity=0.161 Sum_probs=118.3
Q ss_pred CCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Ee---c--------------CCCCceEEEec--CcEEEEEEcc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KP---L--------------ELGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~---i--------------~~~~~~~~~~~--~~~~~L~I~~ 130 (805)
+.+.+.+|++++|.|.+. +.+ .+.|.|+|.. .. + ...+|+.+..+ ++..+|+|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAAS--GFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSK 85 (220)
T ss_dssp CCEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECS
T ss_pred CCeEecCCCcEEEEEEec--CccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECC
Confidence 357899999999999998 333 5789999842 21 1 02357877764 4577999999
Q ss_pred cccCCCeEEEEEEEeCCee---EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 131 VYDRDQGIYTCRAWNLAGE---TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
++.+|+|.|.|.+.+..+. ....+.|.|...+ ..+|.+..
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~P~v~~ 128 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES-------------------------------------ARNPTIYP 128 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSC-------------------------------------CBCCEEEE
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecCCC-------------------------------------CCCCEEEE
Confidence 9999999999999987542 1223466665321 13455544
Q ss_pred ccccccccCCCceEEEEEEEeeCCCCC--eEEEEEECCEEccC-CCcEEEEEEcC----eEEEEEcCCCCcccEEEEEEE
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQT--MTVEFLYNGKPIEA-SHRIRTVHAFG----MVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p~--~~i~W~k~g~~l~~-~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.. .. .+.+|+.++|.|.+.. ..|. +.+.|+++|..+.. .... ....++ .+.|.|.....+|+|.|+|.|
T Consensus 129 ~~-~~-~~~~g~~v~L~C~~~g-~~P~~~~~v~W~~~~~~~~~~~~~~-~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v 204 (220)
T 2fbj_H 129 LT-LP-PALSSDPVIIGCLIHD-YFPSGTMNVTWGKSGKDITTVNFPP-ALASGGRYTMSNQLTLPAVECPEGESVKCSV 204 (220)
T ss_dssp EC-CC-SSSCCSSEEEEEEEEE-EBSCCCEEEEESCCCSSCEEEECCC-EECSSSCEEEEEEEEECGGGSCTTCEEEEEE
T ss_pred ee-cc-cccCCCcEEEEEEEEe-EECCCcEEEEEecCCEecceEecCc-eECCCCCEEEEEEEEECHHHcCCCCeEEEEE
Confidence 33 21 3678999999999852 3365 89999999976521 0000 011122 236899988889999999999
Q ss_pred EcCCeeEE
Q psy2166 281 TNKWGQAE 288 (805)
Q Consensus 281 ~n~~g~~~ 288 (805)
.|..+...
T Consensus 205 ~n~~~~~~ 212 (220)
T 2fbj_H 205 QHDSNPVQ 212 (220)
T ss_dssp EETTSCCE
T ss_pred EcCCCceE
Confidence 99887654
No 297
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.70 E-value=1.8e-17 Score=159.36 Aligned_cols=184 Identities=13% Similarity=0.147 Sum_probs=104.5
Q ss_pred ecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEEEEE
Q psy2166 78 LGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIY 157 (805)
Q Consensus 78 v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 157 (805)
+.+|+.++|.|.+ |.+.|.|+|||..+... . ....+|.|.+++.+|+|.|+|.+.+... ....|.
T Consensus 15 ~~~G~~v~L~C~~-----p~~~i~W~k~g~~l~~~-----~--~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~~v~ 79 (204)
T 1sy6_A 15 YQEDGSVLLTCDA-----EAKNITWFKDGKMIGFL-----T--EDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPLQVY 79 (204)
T ss_dssp CCSSSEEEEEECS-----CSSEEEEEETTEEEEEE-----E--SSCCCEEEEEGGGCCEEEEEEESSSSCC---CCEEEE
T ss_pred ecCCCeEEEEEcC-----CCCEEEEEECCEECCCC-----C--CCCCeEEeCCCCcCCCEEEEEEecCCCC---eeEEEE
Confidence 4689999999986 56799999999887532 0 1122799999999999999999754321 123344
Q ss_pred EeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEE
Q psy2166 158 CSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTV 237 (805)
Q Consensus 158 V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i 237 (805)
|....... ............ ...... .. ......++.+...+. . ...+|+.++|.|. +.|.+.+
T Consensus 80 v~~~~~~~--~~~~~~~~~~~~---~~~~~~--~~---~~~~~~~~~~~~~p~-~-v~~~G~~v~L~C~----g~p~p~i 143 (204)
T 1sy6_A 80 YRMGSADD--AKKDAAKKDDAK---KDDAKK--DG---SDGNEEMGGITQTPY-K-VSISGTTVILTCP----QYPGSEI 143 (204)
T ss_dssp EEC----------------------------------------------CCCC-E-EEEETTEEEEECS----CCCSSCE
T ss_pred EEEecccc--cccccccccccc---cccccc--cc---ccccccccceecCCc-e-eeecCCcEEEEcC----CCCCCce
Confidence 33100000 000000000000 000000 00 000001122222111 1 1238999999995 6778899
Q ss_pred EEEECCEEccCCC-cEEEEEEcCeEEEEEcCC-CCcccEEEEEEEEcCCeeE-EEEEEEE
Q psy2166 238 EFLYNGKPIEASH-RIRTVHAFGMVVLEILGT-KIEDTGVYTCRATNKWGQA-EISVNLE 294 (805)
Q Consensus 238 ~W~k~g~~l~~~~-~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~~~n~~g~~-~~~~~l~ 294 (805)
.|+|+|..+.... ...+.... ..|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.
T Consensus 144 ~W~k~~~~l~~~~~~~~~~~~~--~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 144 LWQHNDKNIGGDEDDKNIGSDE--DHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp EEEETTEEESCCTTCTTEEEET--TEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred EEEECCEECCCccCCceEecCC--CEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 9999999886532 11122223 37999999 9999999999999998852 3444443
No 298
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.70 E-value=2.9e-16 Score=157.92 Aligned_cols=184 Identities=13% Similarity=0.170 Sum_probs=117.2
Q ss_pred CCCCceecCCCcEEEEEEEecCCCC------CceEEEEEC--CEec------------CCCCceEEEecCcEEEEEEccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDP------NLKIEWIFN--GKPL------------ELGSRFKTTADFGFVTLDLTEV 131 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p------~~~v~W~k~--g~~i------------~~~~~~~~~~~~~~~~L~I~~~ 131 (805)
.+..+.+.+|+.++|.|.+. +.+ .+.|.|+|+ |..+ ....|+.+..++...+|+|.++
T Consensus 11 ~p~~v~v~~G~~v~L~C~~~--~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v 88 (264)
T 2gjj_A 11 TPSSLPVSVGEKVTMTCKSS--QTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSV 88 (264)
T ss_dssp ECSEEEEETTCCEEEEEEES--SCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSC
T ss_pred cCCeEEecCCCcEEEEeEcC--CcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCC
Confidence 34467899999999999998 455 678999995 3221 1246888776667789999999
Q ss_pred ccCCCeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee-ccc
Q psy2166 132 YDRDQGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT-SEF 209 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~ 209 (805)
+.+|+|.|.|.+.+..+.. ...+.|.|...+.... +.+. ... .....+|.+. ..+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~----~~~~------------------~~~-~~~~~~~~~~~~~~ 145 (264)
T 2gjj_A 89 KAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSG----GGGS------------------GGG-GSGGGGSEVQLQQS 145 (264)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEECC------------------------------------------CCEEEEC
T ss_pred CHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccc----cccc------------------ccc-ccccccCcEEEeCC
Confidence 9999999999999875422 2235677765421000 0000 000 0000012221 122
Q ss_pred ccccccCCCceEEEEEEEeeCCCC--CeEEEEEECC--EE---cc----C----------CCcEEEEEE--cCeEEEEEc
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQ--TMTVEFLYNG--KP---IE----A----------SHRIRTVHA--FGMVVLEIL 266 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p--~~~i~W~k~g--~~---l~----~----------~~~~~~~~~--~~~~~L~i~ 266 (805)
+.. .+.+|++++|.|.+. +.+ .+.+.|||+. .. +. . ..++..... .....|.|.
T Consensus 146 ~~~-~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 222 (264)
T 2gjj_A 146 GPE-VVKTGASVKISCKAS--GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLN 222 (264)
T ss_dssp CCE-EECTTCCEEEEEEEE--SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCE-EEcCCCcEEEEEEEe--CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEEC
Confidence 222 478999999999984 444 3799999963 21 10 0 234433322 246789999
Q ss_pred CCCCcccEEEEEEEEcC
Q psy2166 267 GTKIEDTGVYTCRATNK 283 (805)
Q Consensus 267 ~~~~~d~G~Y~C~~~n~ 283 (805)
+++.+|+|.|.|.+.|.
T Consensus 223 ~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 223 SLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCCGGGCEEEEEEEECS
T ss_pred cCCcccCEEEEEEEecC
Confidence 99999999999999985
No 299
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.69 E-value=1.3e-16 Score=155.29 Aligned_cols=170 Identities=16% Similarity=0.294 Sum_probs=112.9
Q ss_pred cccCCCeEEEEEEEeec-----CCCCcEEEEEECCEE------cc-----------CCCceEEEEe--CcEEEEEEcccC
Q psy2166 315 GLKDGDSAHFECTLTPV-----NDPELKVEWFHNGKP------IF-----------HKNRVKMVSD--FGFVVMDIAYVQ 370 (805)
Q Consensus 315 ~~~~g~~~~l~C~~~~~-----~~p~~~v~W~~~g~~------l~-----------~~~~~~~~~~--~~~~~l~i~~v~ 370 (805)
.+.+|+.++|.|.+.+. ..+.+.+.|+|++.. +. ...++.+..+ .+...|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 11 TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR 90 (214)
T ss_dssp EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC
Confidence 37899999999999721 125789999998752 11 1234544332 234569999999
Q ss_pred cCCceEEEEEEEeCceeeE----EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecce
Q psy2166 371 SHDSGEYVCRAWNKYGEDF----TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDV 446 (805)
Q Consensus 371 ~~d~G~Y~C~a~n~~g~~~----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (805)
.+|+|.|.|.+.+..+... ..+.|.|...
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~----------------------------------------------- 123 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL----------------------------------------------- 123 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEECC-----------------------------------------------
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEecC-----------------------------------------------
Confidence 9999999999998763322 3456666432
Q ss_pred eeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeC--C
Q psy2166 447 TQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPV--T 524 (805)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~--g 524 (805)
..+|.+..+ . .+.+|+.++|.|.+.+. +
T Consensus 124 ----------------------------------------------~~~p~i~~~--~--~~~~G~~v~L~C~~~~~~~~ 153 (214)
T 2zg1_A 124 ----------------------------------------------IEKPDIHFL--E--PLESGRPTRLSCSLPGSCEA 153 (214)
T ss_dssp ----------------------------------------------CCCCEEC----C--CCCTTCCEEEEEECTTCCSC
T ss_pred ----------------------------------------------CCCCceecC--c--cccCCCeEEEEEEeccCCCC
Confidence 123444321 1 16799999999999732 2
Q ss_pred CCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEE
Q psy2166 525 DPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 525 ~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 587 (805)
.|.|.++|+++|..+... +. .....|.|..+..+|+|.|+|.|.|..+.......+.
T Consensus 154 ~p~p~v~W~~~~~~~~~~-~~-----~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 154 GPPLTFSWTGNALSPLDP-ET-----TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp SSCCEEEEESSTTSSSCS-SC-----CCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred CCCceEEEeCCCCccCCC-Cc-----eeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 488999999998654322 11 1233699999999999999999999876544444443
No 300
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.69 E-value=1.1e-15 Score=149.60 Aligned_cols=179 Identities=14% Similarity=0.164 Sum_probs=118.6
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c--------------CCCCceEEEec--CcEEEEEEcccc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L--------------ELGSRFKTTAD--FGFVTLDLTEVY 132 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i--------------~~~~~~~~~~~--~~~~~L~I~~~~ 132 (805)
+.+.+.+|+.|+|.|.+.+.....+.|.|+|+. .. + ...+|+.+..+ .+..+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 367899999999999998321124789999842 11 1 02357777654 357799999999
Q ss_pred cCCCeEEEEEEEeCCe----e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 133 DRDQGIYTCRAWNLAG----E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~~g----~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
.+|+|.|+|.+.+..| . ....+.|.|.... ..+|.+.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~P~i~ 130 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS-------------------------------------ASAPTLF 130 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC-------------------------------------CBCCEEE
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCC-------------------------------------CCCCEEE
Confidence 9999999999998642 1 1123466665311 1234444
Q ss_pred cccccccccCCCceEEEEEEEeeCCCCCe-EEEEEE-CCEEccCCCcEEEEEEcC----eEEEEEcCCCC--cccEEEEE
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLY-NGKPIEASHRIRTVHAFG----MVVLEILGTKI--EDTGVYTC 278 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k-~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~--~d~G~Y~C 278 (805)
...+.. .+.+|+.++|.|.+. ...|.+ .+.|++ +|..+...........++ .+.|.|..... +|.|.|+|
T Consensus 131 ~~~~~~-~~~~g~~v~L~C~~~-g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C 208 (223)
T 1dee_B 131 PLVSCE-NSNPSSTVAVGCLAQ-DFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVC 208 (223)
T ss_dssp EEECTT-CCCSSSEEEEEEEEE-EEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEE
T ss_pred EecCCc-ccCCCCcEEEEEEEE-EEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEE
Confidence 322222 257899999999984 233666 999999 998875410000000112 24688887776 88999999
Q ss_pred EEEcCCeeEEEEE
Q psy2166 279 RATNKWGQAEISV 291 (805)
Q Consensus 279 ~~~n~~g~~~~~~ 291 (805)
.|.|..+.....+
T Consensus 209 ~v~n~~~~~~~~~ 221 (223)
T 1dee_B 209 KVQHPNGNKEKDV 221 (223)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEEeCCCCCcccc
Confidence 9999988765543
No 301
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.69 E-value=2.2e-16 Score=154.11 Aligned_cols=83 Identities=10% Similarity=0.037 Sum_probs=58.8
Q ss_pred CCeeeecCCcccccCCCCeEEEEEEEeecCC-CC--eEEEEEECCEEccC-CCCeEEEeeCc---EEEEEEcCCCCCCCE
Q psy2166 691 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGD-QT--MTVEFLYNGKPIEA-SHRIRTVHAFG---MVVLEILGTKIEDTG 763 (805)
Q Consensus 691 ~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~--~~v~W~~~g~~l~~-~~~~~~~~~~~---~~~L~i~~v~~~d~G 763 (805)
+|.+...+ .. .+.+|+.++|.|.+. |. |. +.|.|+++|..+.. ........++. ...|.|.++..+|+|
T Consensus 123 ~P~v~~~~-~~-~~~~g~~v~L~C~~~--g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 198 (220)
T 2fbj_H 123 NPTIYPLT-LP-PALSSDPVIIGCLIH--DYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGE 198 (220)
T ss_dssp CCEEEEEC-CC-SSSCCSSEEEEEEEE--EEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTC
T ss_pred CCEEEEee-cc-cccCCCcEEEEEEEE--eEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCC
Confidence 45555544 33 578999999999998 55 76 89999999976521 11111111121 125999999999999
Q ss_pred EEEEEEEcCCccEE
Q psy2166 764 VYTCRATNKWGQAE 777 (805)
Q Consensus 764 ~Y~C~a~N~~G~~~ 777 (805)
.|+|.|.|..|..+
T Consensus 199 ~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 199 SVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEEEEEETTSCCE
T ss_pred eEEEEEEcCCCceE
Confidence 99999999999765
No 302
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.69 E-value=7.4e-17 Score=150.00 Aligned_cols=152 Identities=11% Similarity=0.125 Sum_probs=109.0
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCC------------CCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLEL------------GSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~------------~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
.+.+.+|+.|+|.|.+. .|.+.|.|+|++..+.. .+|+.+...++ +|.|.+++.+|+|.|.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~---~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~--sL~I~~v~~~DsG~Y~C~ 78 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN---VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG--SLTIYNLTSSDEDEYEME 78 (171)
T ss_dssp EEEEETTCCEEECCCCS---SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC--CEEECSCCGGGCEEEEEE
T ss_pred EEEEEcCCCEEEcCCCC---CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC--eEEECCCChhhCceEEEE
Confidence 35788999999999885 47889999998865421 22444432223 799999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
+.|..| .....|.|..+. ..|.+..... . ..
T Consensus 79 ~~n~~~--~~~~~L~V~~~~--------------------------------------~~p~i~~~~~------~---~~ 109 (171)
T 1ccz_A 79 SPNITD--TMKFFLYVLEMV--------------------------------------SKPMIYWECS------N---AT 109 (171)
T ss_dssp CTTCCS--CEEEEEEEECCC--------------------------------------CCCEEEEETT------T---TE
T ss_pred EeCCCC--cEEEEEEEECcC--------------------------------------CCCEEEEecC------C---cE
Confidence 998877 556677776432 2244432211 1 27
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEE
Q psy2166 223 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 293 (805)
Q Consensus 223 l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 293 (805)
|.|.+ .+.|.|.+.|+++|..+..... ..|.+. ...|+|.|+|.|.|..+..+..+.+
T Consensus 110 L~C~~--~~~p~p~i~W~~~~~~l~~~~~---------~~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 110 LTCEV--LEGTDVELKLYQGKEHLRSLRQ---------KTMSYQ--WTNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp EEEEC--SSCSSCEEEEEETTEEEEEESS---------SEEEEE--CSCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEEe--CCCCCcEEEEEECCEECcCCcc---------eEEEEe--ccCCCceEEEEEEcccCcccceeEE
Confidence 99988 6778899999999998764322 124443 3778999999999999887766554
No 303
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=1.9e-16 Score=136.33 Aligned_cols=97 Identities=25% Similarity=0.302 Sum_probs=89.3
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.|+|+|+|..+..+.++.+....+...|.|.++..+|+|.|+|.|
T Consensus 6 ~pp~i~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPEDQ-KVRAGESVELFGKVT--GTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCCSE-EEETTCCEEEEEEEE--SSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCEEEeCCCCe-EEeCCCeEEEEEEEE--cCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 689999988888 999999999999999 99999999999999999888988887777789999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeCC
Q psy2166 770 TNKWGQAEISVNLECVVWSP 789 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~~ 789 (805)
.|..|..+..+.|.|...|.
T Consensus 83 ~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 83 ENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp ECSSCEEECCEEEEEECSCS
T ss_pred EECCCcEEEEEEEEEECCCC
Confidence 99999999999999976543
No 304
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.69 E-value=2.6e-16 Score=153.82 Aligned_cols=174 Identities=14% Similarity=0.173 Sum_probs=111.7
Q ss_pred cccCCCeEEEEEEEeeCCCC--CcEEEEEECC--EE---c---cC-------------CCceEEEee--CCEEEEEEccC
Q psy2166 507 QLKEGQSAHFEARLTPVTDP--DLVVEWFYNG--KK---L---PH-------------GHRYRTFHD--FGIVILDILYC 561 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~g--~~---l---~~-------------~~~~~~~~~--~~~~~L~i~~v 561 (805)
.+.+|++++|.|.+. +.+ .+.+.|+|++ .. + .. ..|+.+..+ .+...|.|.++
T Consensus 11 ~~~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 11 LVQPGGSMKLSCVAS--GFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp EECTTCCEEEEEEEE--SSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred EEcCCCeEEEEEEEc--CCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 488999999999998 444 6899999853 11 1 00 246665443 34567899988
Q ss_pred CCCCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEE
Q psy2166 562 YEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641 (805)
Q Consensus 562 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 641 (805)
+.+|+|.|.|.+.|..|..... .
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~--------~------------------------------------------------- 111 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYW--------G------------------------------------------------- 111 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEE--------C-------------------------------------------------
T ss_pred CHHHCEEEEEEEecCCcccceE--------C-------------------------------------------------
Confidence 8889999999887754321000 0
Q ss_pred EEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC
Q psy2166 642 YECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD 721 (805)
Q Consensus 642 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~ 721 (805)
..+.|.|...+ ..+|.+...+... .+.+|+.++|.|.+. |.
T Consensus 112 -------------~~~~l~V~~~~-----------------------~~~P~i~~~~~~~-~~~~g~~v~L~C~~~--g~ 152 (220)
T 1pz5_B 112 -------------QGTSVTVSSAT-----------------------TTAPSVYPLVPGC-SDTSGSSVTLGCLVK--GY 152 (220)
T ss_dssp -------------CCEEEEECSSC-----------------------CBCCEEEEECCCS-CCSCSSSEEEEEEEE--EE
T ss_pred -------------CCEEEEEccCC-----------------------CCCCeEEEccccc-ccCCCCcEEEEEEEE--EE
Confidence 00111111100 0245554444333 567899999999999 76
Q ss_pred -CCe-EEEEEECCEEcc--CCCCeEEEeeC---cEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEE
Q psy2166 722 -QTM-TVEFLYNGKPIE--ASHRIRTVHAF---GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 781 (805)
Q Consensus 722 -p~~-~v~W~~~g~~l~--~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 781 (805)
|.| .|+|++++.... ..... ...+ ....|.|.++..+| |.|+|.|.|..|....++.
T Consensus 153 ~P~p~~v~W~~~~~~~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 153 FPEPVTVKWNYGALSSGVRTVSSV--LQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp BSSCCEEEEGGGTCCTTEEECCCE--EETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred eCCCeEEEEecCCcccceEEcCCc--ccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeec
Confidence 888 999999886411 01111 0111 12469999998877 9999999999998766554
No 305
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.69 E-value=1.6e-16 Score=154.72 Aligned_cols=182 Identities=13% Similarity=0.089 Sum_probs=113.5
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c-------------CCCCceEEEecCcEEEEEEcccccCC
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L-------------ELGSRFKTTADFGFVTLDLTEVYDRD 135 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i-------------~~~~~~~~~~~~~~~~L~I~~~~~~D 135 (805)
..+.+.+|+.++|.|.+.+...+.+.|.|+|.. .. + ....|+.+...++.++|.|.+++.+|
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 86 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTED 86 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGG
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCccc
Confidence 367899999999999998433456789999832 11 1 12457887777788899999999999
Q ss_pred CeEEEEEEEeCCee----EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccc
Q psy2166 136 QGIYTCRAWNLAGE----TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQH 211 (805)
Q Consensus 136 ~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 211 (805)
+|.|.|.+.+..+. ......|.|.... ..+|.+....+.
T Consensus 87 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~~~~~ 129 (215)
T 3nl4_H 87 TATYFCVRKYGSEWGGDLWGPGTLVTVSSGQ-------------------------------------PKAPSVFPLAPC 129 (215)
T ss_dssp CEEEEEEEECSSSSCEEEECCCEEEEECSSC-------------------------------------CBCCEEEEECCC
T ss_pred CEEEEEEEecCCCccceEEcCCEEEEEeCCC-------------------------------------cCCCEEEEecCC
Confidence 99999999987542 2233456664211 133555433333
Q ss_pred ccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcCeEEE-EEcCCCCcccEEEEEEEEcCCeeEEEE
Q psy2166 212 LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVL-EILGTKIEDTGVYTCRATNKWGQAEIS 290 (805)
Q Consensus 212 ~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~~~~L-~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 290 (805)
. .+.+|+.++|.|.+.....+...+.|+++|..+...........++...+ ....+...| |.|+|.|.|..+.....
T Consensus 130 ~-~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~ 207 (215)
T 3nl4_H 130 C-GDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVD 207 (215)
T ss_dssp T-TCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEE
T ss_pred c-cccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceE
Confidence 2 36689999999998543333567899999975532211111122222111 112345556 99999999998876665
Q ss_pred EEEE
Q psy2166 291 VNLE 294 (805)
Q Consensus 291 ~~l~ 294 (805)
..+.
T Consensus 208 ~~l~ 211 (215)
T 3nl4_H 208 KTVA 211 (215)
T ss_dssp EECC
T ss_pred EecC
Confidence 5543
No 306
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.4e-16 Score=153.47 Aligned_cols=184 Identities=21% Similarity=0.175 Sum_probs=131.0
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC--CceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG--SRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~--~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+|.| ..+. ++.+.+|+.++|.|.+. |.|.+.|.|+|||..+..+ .++.+...+...+|.|.+++.+|+|.|.|.
T Consensus 19 ~P~~-~~p~-~~~~~~G~~v~l~C~~~--g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 19 APKL-QGPV-AVYTWEGNQVNITCEVF--AYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEEE-ECCS-EEEECTTCCEEEEEEEE--EESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEE
T ss_pred CCcc-cCCc-eEEEECCCCEEEEEEEe--ecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEE
Confidence 4555 3333 58899999999999999 6888899999999999876 567777766778999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEE
Q psy2166 143 AWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAH 222 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~ 222 (805)
|.|..|.......|.|..++ .+|..... ...+..+.
T Consensus 95 a~n~~g~~~~~~~l~v~~~P--------------------------------------~~p~~~~~------~~~~~~~~ 130 (215)
T 3mtr_A 95 AVNRIGQESLEFILVQADTP--------------------------------------SSPSIDQV------EPYSSTAQ 130 (215)
T ss_dssp EECSSCEEEEEEEEEECCCC--------------------------------------CCCEEEEE------EEETTEEE
T ss_pred EEECCCceEEEEEEEECCCC--------------------------------------CCCcceEE------EEecceEE
Confidence 99999998888888876543 22322211 12456788
Q ss_pred EEEEEee--CCCCCe--EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEEEEEEEe
Q psy2166 223 FEASLIP--VGDQTM--TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 296 (805)
Q Consensus 223 l~C~~~~--~~~p~~--~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 296 (805)
|.|.... .+.|.. .+.|++++...-....+..........|.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 131 l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 131 VQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp EEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred EEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 8886421 233433 5889888753111000000000112479999999999999999999999987665555544
No 307
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=4e-16 Score=155.48 Aligned_cols=174 Identities=14% Similarity=0.187 Sum_probs=119.2
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEE----------------CCEEccCC---CceEEEE-eCcEEEEEEcccCcCCce
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFH----------------NGKPIFHK---NRVKMVS-DFGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~----------------~g~~l~~~---~~~~~~~-~~~~~~l~i~~v~~~d~G 375 (805)
+.+|+.++|.|.+. +.+.+.|.|+| ++...... .++.+.. ......|.|.+++.+|+|
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 90 (246)
T 4dzb_B 13 SKSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSS 90 (246)
T ss_dssp EETTSCEEEEEEES--SSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCE
T ss_pred EeCCCcEEEEeEec--CCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCE
Confidence 78999999999997 77889999998 33333222 4666554 345778999999999999
Q ss_pred EEEEEEEeCce----eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecC
Q psy2166 376 EYVCRAWNKYG----EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKE 451 (805)
Q Consensus 376 ~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (805)
.|.|.+.+..+ .......|.|....
T Consensus 91 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--------------------------------------------------- 119 (246)
T 4dzb_B 91 FYICSARTSGDFGEQFFGPGTRLTVLEDL--------------------------------------------------- 119 (246)
T ss_dssp EEEEEECCSSGGGCCEECCCEEEEEESCG---------------------------------------------------
T ss_pred EEEEEEecCCCCcceEEcCCEEEEEecCC---------------------------------------------------
Confidence 99999987643 11233455554210
Q ss_pred CceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEE
Q psy2166 452 GQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVE 531 (805)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~ 531 (805)
....+|.+....+....+.+|+.++|.|.+.+...|++.++
T Consensus 120 ---------------------------------------~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 160 (246)
T 4dzb_B 120 ---------------------------------------KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 160 (246)
T ss_dssp ---------------------------------------GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred ---------------------------------------CcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEE
Confidence 01245666655444444678999999999996322234999
Q ss_pred EEECCEEccCCCceEEE--------eeCC---EEEEEEccCCCCC-CEEEEEEEEcCCcceE
Q psy2166 532 WFYNGKKLPHGHRYRTF--------HDFG---IVILDILYCYEEN-SGVYECRATNKYGSDV 581 (805)
Q Consensus 532 W~~~g~~l~~~~~~~~~--------~~~~---~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~ 581 (805)
|+|||..|..+.+.... .++. .+.|.|.....+| +|.|+|.|.|......
T Consensus 161 W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 161 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 99999998754221110 0122 1348898888888 9999999999865543
No 308
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.68 E-value=1.5e-16 Score=160.87 Aligned_cols=170 Identities=15% Similarity=0.193 Sum_probs=109.3
Q ss_pred ccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEc------------cCC---C-cEEEEE-EcCeEEEEEcCCCCcccE
Q psy2166 214 NLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPI------------EAS---H-RIRTVH-AFGMVVLEILGTKIEDTG 274 (805)
Q Consensus 214 ~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l------------~~~---~-~~~~~~-~~~~~~L~i~~~~~~d~G 274 (805)
.+.+|++++|.|.+ .+ +.+.+.|||. +... ... . ++.... ..+...|.|.+++.+|+|
T Consensus 38 ~v~~G~~v~L~C~~--~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 114 (270)
T 3qib_D 38 VKGQGQKAKMRCIP--EK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSA 114 (270)
T ss_dssp EEETTSCEEEEEEC--CT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCE
T ss_pred EEcCCCCEEEEEEe--cC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCe
Confidence 37899999999987 33 6689999982 2111 000 0 333332 234678999999999999
Q ss_pred EEEEEEEcCC----eeEEEEEEEEEeccC-CCCCCeEEecCCCcccccCCCeEEEEEEEeecCCCCc-EEEEEECCEEcc
Q psy2166 275 VYTCRATNKW----GQAEISVNLECVDKS-KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFHNGKPIF 348 (805)
Q Consensus 275 ~Y~C~~~n~~----g~~~~~~~l~v~~~~-~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~~-~v~W~~~g~~l~ 348 (805)
.|.|.+.+.. ........+.|.... ...+|.+.........+..|+.++|.|.+.+ ..|.+ .+.|+++|..+.
T Consensus 115 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~l~ 193 (270)
T 3qib_D 115 LYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVH 193 (270)
T ss_dssp EEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEEC
T ss_pred EEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecc-eeCCCeEEEEEECCEECC
Confidence 9999999642 222333456665321 1125555544333333566999999999984 35655 899999999886
Q ss_pred CCCceEE--E------EeC---cEEEEEEcccCcCC-ceEEEEEEEeCcee
Q psy2166 349 HKNRVKM--V------SDF---GFVVMDIAYVQSHD-SGEYVCRAWNKYGE 387 (805)
Q Consensus 349 ~~~~~~~--~------~~~---~~~~l~i~~v~~~d-~G~Y~C~a~n~~g~ 387 (805)
....... . .++ ....|.|.....+| +|.|+|.|.|....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 194 SGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp TTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred CCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 4321100 0 011 11347888887777 99999999987653
No 309
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.68 E-value=4.8e-16 Score=154.31 Aligned_cols=175 Identities=15% Similarity=0.191 Sum_probs=114.7
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--E---Ecc---------CCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--K---PIF---------HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~---~l~---------~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|+.++|.|.+. +.|.+.+.|+|+. . .+. ...++.+...+....|.|.+++.+|+|.|.|.+
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 90 (242)
T 2znx_A 13 VTPGNSVSLSCRAS--QSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQ 90 (242)
T ss_dssp ECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred EcCCCcEEEEEEeC--CCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeE
Confidence 88999999999997 7778899999853 1 110 134677666666778999999999999999999
Q ss_pred EeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..+... ..+.|.|..++.....
T Consensus 91 ~n~~~~~~~~~~~L~V~~~~~~~~~------------------------------------------------------- 115 (242)
T 2znx_A 91 SNSXPYTFGGGTKLEITGGGGSGGG------------------------------------------------------- 115 (242)
T ss_dssp CSSSSCEECCCEEEEEC---------------------------------------------------------------
T ss_pred ecCCceEECCCEEEEEcCCCCCCcc-------------------------------------------------------
Confidence 98754322 2345666432210000
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEEC--CEE
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYN--GKK 538 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~--g~~ 538 (805)
......++.+...++... +.+|++++|.|.+.+...+.+.+.|+|+ |..
T Consensus 116 ----------------------------~~~~~~~~~~~~~~~~~~-v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~ 166 (242)
T 2znx_A 116 ----------------------------GSGGGGSDIQLQESGPSL-VKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNR 166 (242)
T ss_dssp -----------------------------------CCEEEEECCSE-ECTTSCEEEEEEEESSCGGGSCEEEEEECTTSC
T ss_pred ----------------------------cccccccceeeecCCcce-ecCCCeEEEEEEEEccccCCcceeeEeeCCCCC
Confidence 000001122222233333 8999999999999942223578999984 332
Q ss_pred cc----------------CCCceEEEee--CCEEEEEEccCCCCCCEEEEEEEEcC
Q psy2166 539 LP----------------HGHRYRTFHD--FGIVILDILYCYEENSGVYECRATNK 576 (805)
Q Consensus 539 l~----------------~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~ 576 (805)
+. ...++.+..+ .....|.|.+++.+|+|.|+|.|.|.
T Consensus 167 ~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 167 LEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred cEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 20 1345665443 34668999999999999999999883
No 310
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.68 E-value=2.1e-17 Score=161.80 Aligned_cols=174 Identities=14% Similarity=0.206 Sum_probs=118.6
Q ss_pred cccCCCeEEEEEEEeecCCCCc----EEEEEECCEEccC-------------CCceEEEE-----eCcEEEEEEcccCcC
Q psy2166 315 GLKDGDSAHFECTLTPVNDPEL----KVEWFHNGKPIFH-------------KNRVKMVS-----DFGFVVMDIAYVQSH 372 (805)
Q Consensus 315 ~~~~g~~~~l~C~~~~~~~p~~----~v~W~~~g~~l~~-------------~~~~~~~~-----~~~~~~l~i~~v~~~ 372 (805)
.+.+|+.++|.|.+.+ +.+.+ .+.|+|++..... ..++.+.. ..+...|.|.+++.+
T Consensus 10 ~~~~G~~v~L~C~~~~-~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 88 (221)
T 3eow_R 10 PGFLGDSVTLPCYLQV-PNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE 88 (221)
T ss_dssp CCCCSSCCEEECCCCC-CSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC
T ss_pred EEEeCCCEEEEeeecc-CCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH
Confidence 3788999999999852 34433 4999998643211 23444443 113457999999999
Q ss_pred CceEEEEEEEeCc-eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecC
Q psy2166 373 DSGEYVCRAWNKY-GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKE 451 (805)
Q Consensus 373 d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (805)
|+|.|+|.+.+.. +.....+.|.|
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~L~V------------------------------------------------------- 113 (221)
T 3eow_R 89 DEGSYTCLFVTFPQGSRSVDIWLRV------------------------------------------------------- 113 (221)
T ss_dssp CCSCBEEEEEESSSCSCEEECCCCC-------------------------------------------------------
T ss_pred HCeEEEEEEEeCCCCceEEEEEEEE-------------------------------------------------------
Confidence 9999999999876 65555555443
Q ss_pred CceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeE-EEEEEEeeCCCCCcEE
Q psy2166 452 GQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA-HFEARLTPVTDPDLVV 530 (805)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v-~L~C~v~~~g~p~~~v 530 (805)
..+|.+........ .+|+.+ .|.|.+.+ +.|.|.+
T Consensus 114 -----------------------------------------~~~P~~~~~~~~~~--~~g~~~~~l~C~~~~-g~P~p~v 149 (221)
T 3eow_R 114 -----------------------------------------LAKPQNTAEVQKVQ--LTGEPVPMARCVSTG-GRPPAQI 149 (221)
T ss_dssp -----------------------------------------CCCCEEEEEEECCC--CCSSSCCEEEEEEES-CSSCCCE
T ss_pred -----------------------------------------EECCCceeecCCcc--cCCceEEEEEEECCC-ccCCCee
Confidence 34566654433322 678888 59999885 6788899
Q ss_pred EEEECCEEccCCCceEEEeeC---CEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 531 EWFYNGKKLPHGHRYRTFHDF---GIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 531 ~W~~~g~~l~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
+|++++.............++ ..+.|.|.++..+|+|.|+|.|.|..+.....+.|..
T Consensus 150 ~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 150 TWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp EEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECC
T ss_pred EEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEE
Confidence 999975443322111101111 2457999999999999999999999988766655544
No 311
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.68 E-value=8.5e-17 Score=156.77 Aligned_cols=185 Identities=15% Similarity=0.093 Sum_probs=115.2
Q ss_pred cCCCeEEecCCCCce-ecCCCcEEEEEEEecCC--CCCceEEEEECCEecCCCCceEE-EecC----cEEEEEEcccccC
Q psy2166 63 FAKPVFIVPLKPEFK-LGEAQPLHLEAQVEPKN--DPNLKIEWIFNGKPLELGSRFKT-TADF----GFVTLDLTEVYDR 134 (805)
Q Consensus 63 ~~~p~~~~~~~~~~~-v~~G~~v~L~C~~~~~~--~p~~~v~W~k~g~~i~~~~~~~~-~~~~----~~~~L~I~~~~~~ 134 (805)
..+|.+.+.++.... +.+|+.++|.|.+.+.. .+.+.|+|+|++..+........ ...+ ...+|.|.+++.+
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 345666665553333 88999999999998431 12489999999988764321111 1111 2347999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccc
Q psy2166 135 DQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSN 214 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 214 (805)
|+|.|+|.|.|..+.......+.. .. ....+|.+...+....
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~--~~-----------------------------------~~~~~P~v~~~~~~~~- 128 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISK--IK-----------------------------------GLVRAPQVYILPPPAE- 128 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECC--CC-----------------------------------CCCBCCEEEEECCCGG-
T ss_pred CCCeEEEEEECCcCCCcceEEEee--cC-----------------------------------CCCCCCEEEEECCChH-
Confidence 999999999998654311112210 00 0114566655444332
Q ss_pred cCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEE-EEEcCe----EEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 215 LSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRT-VHAFGM----VVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 215 v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~-~~~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
..+|+.++|.|.+.. .+|.+ .|.|+|+|..+........ ...++. ..|.|.....+|.|.|+|.|.|....
T Consensus 129 ~~~g~~~~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 129 QLSRKDVSLTCLVVG-FNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp GTTSSEEEEEEEEEE-EBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred HhcCCceEEEEEEEe-eeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 236999999999842 25554 9999999998753211111 122221 34666655566799999999997643
No 312
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.68 E-value=8.4e-18 Score=166.18 Aligned_cols=171 Identities=15% Similarity=0.134 Sum_probs=97.2
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec------------CCCCceEEEecCcEEEEEEcccccCCCeE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL------------ELGSRFKTTADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 138 (805)
+..+.+.+|++++|.|.+. +.|.+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.+|+|.
T Consensus 30 p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 107 (233)
T 3bqu_C 30 PASLSMSIGEKVTIRCITS--TDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVAD 107 (233)
T ss_dssp CSBC-------CCEEEEEE--EEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSE
T ss_pred CCeEEEecCCCEEEEEecC--CcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEE
Confidence 3467899999999999998 4556789999853 211 11346655555566689999999999999
Q ss_pred EEEEEEeCCeeEE-EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 139 YTCRAWNLAGETF-TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 139 Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
|.|.+.|..+... ....|.|... ..+|.+...+.... +.+
T Consensus 108 Y~C~~~~~~~~~~~~~~~l~V~~~--------------------------------------~~~p~v~~~~~~~~-~~~ 148 (233)
T 3bqu_C 108 YYCLQSDNLPYTFGGGTNLEIKRA--------------------------------------DAAPTVSIFPPSSE-QLT 148 (233)
T ss_dssp EEEEECSSSSCCBCCCCBC---CC--------------------------------------CBCCEEEEECCCHH-HHH
T ss_pred EEEEEecCCceeecCCEEEEEeCC--------------------------------------CCCCEEEEeCCCHH-hhc
Confidence 9999988654321 1223444321 13455555433322 347
Q ss_pred CceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEE-EE--EcC----eEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 218 GEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRT-VH--AFG----MVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~-~~--~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
|+.++|.|.+.. ..|. +.+.|+|+|..+........ .. .++ .+.|.|.....+|+|.|+|.|.|...
T Consensus 149 g~~v~L~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 149 SGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp TTEEEEEEEEEE-EBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCceEEEEEEcc-ccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 999999999853 2344 48999999998765411110 10 111 24789999999999999999998654
No 313
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.68 E-value=1.6e-16 Score=154.86 Aligned_cols=184 Identities=15% Similarity=0.191 Sum_probs=116.7
Q ss_pred CCCeEEecCCCccc-ccCCCeEEEEEEEeecC--CCCcEEEEEECCEEccCCCceEEEE-eC----cEEEEEEcccCcCC
Q psy2166 302 QPPKFTSHIKSLEG-LKDGDSAHFECTLTPVN--DPELKVEWFHNGKPIFHKNRVKMVS-DF----GFVVMDIAYVQSHD 373 (805)
Q Consensus 302 ~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~--~p~~~v~W~~~g~~l~~~~~~~~~~-~~----~~~~l~i~~v~~~d 373 (805)
.+|.+...+..... +.+|+.++|.|.+.+.. .+.+.|.|+|++..+.......... .+ ....|.|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 45555555444332 67899999999998422 2348999999998775321110000 01 12469999999999
Q ss_pred ceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCc
Q psy2166 374 SGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 453 (805)
Q Consensus 374 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (805)
+|.|+|.|.|..+.......+..
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~--------------------------------------------------------- 110 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISK--------------------------------------------------------- 110 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECC---------------------------------------------------------
T ss_pred CCeEEEEEECCcCCCcceEEEee---------------------------------------------------------
Confidence 99999999998764311111110
Q ss_pred eEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEE
Q psy2166 454 SAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEW 532 (805)
Q Consensus 454 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W 532 (805)
...+..+|.+....+... ..+|+.++|.|.+.++ .|. +.|+|
T Consensus 111 -----------------------------------~~~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~g~-~P~~~~v~W 153 (218)
T 2rgs_A 111 -----------------------------------IKGLVRAPQVYILPPPAE-QLSRKDVSLTCLVVGF-NPGDISVEW 153 (218)
T ss_dssp -----------------------------------CCCCCBCCEEEEECCCGG-GTTSSEEEEEEEEEEE-BSSCCEEEE
T ss_pred -----------------------------------cCCCCCCCEEEEECCChH-HhcCCceEEEEEEEee-eCCCcEEEE
Confidence 012346777766555443 3469999999999952 454 49999
Q ss_pred EECCEEccCCCceEE--EeeCCE---EEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 533 FYNGKKLPHGHRYRT--FHDFGI---VILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 533 ~~~g~~l~~~~~~~~--~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
+|||..+........ ..++.. +.|.|.....+|.|.|+|.|.|....
T Consensus 154 ~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 154 TSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred EECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 999998854221111 122222 23566654455799999999998654
No 314
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.68 E-value=1.4e-16 Score=161.07 Aligned_cols=183 Identities=20% Similarity=0.294 Sum_probs=120.5
Q ss_pred eecccccccccCCCceEEEEEEEee-CCCCCeEEEEEECCEEccCC------------------CcEEEEE--EcCeEEE
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIP-VGDQTMTVEFLYNGKPIEAS------------------HRIRTVH--AFGMVVL 263 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~-~~~p~~~i~W~k~g~~l~~~------------------~~~~~~~--~~~~~~L 263 (805)
+...+... .+.+|+.++|.|.+.. .+.+.+.+.|+|++...... .++.... ..+...|
T Consensus 8 v~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 86 (268)
T 3mj6_A 8 LTVSSPQL-RVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSL 86 (268)
T ss_dssp ----CCEE-EEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCE
T ss_pred cccCCCce-EEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEE
Confidence 33333333 4789999999998731 16778999999966432211 2222111 1123679
Q ss_pred EEcCCCCcccEEEEEEEEcCCeeE--EEEEEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEee-cCCCCcEEEE
Q psy2166 264 EILGTKIEDTGVYTCRATNKWGQA--EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTP-VNDPELKVEW 340 (805)
Q Consensus 264 ~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~p~~~v~W 340 (805)
.|.+++.+|+|.|+|.+.+..+.. ...+.|.|.. ..|. ...+.+|+.++|.|.+.+ .+.|.+.+.|
T Consensus 87 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~----~~p~-------~~~v~~G~~v~L~C~~~~~~~~p~~~v~W 155 (268)
T 3mj6_A 87 LLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP----EEPR-------DLRVRVGDTTQMRCSIQSTEEKRVTKVNW 155 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC----CCCS-------EEEEETTCCEEECCBCEESSSSCCCEEEE
T ss_pred EECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec----cCCC-------ccccccCCcEEEEEEecCCCCCCccceEE
Confidence 999999999999999999875544 4445555431 1121 223789999999999942 2778999999
Q ss_pred EEC-CEEccCC---------------------CceEEEE--eCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEE
Q psy2166 341 FHN-GKPIFHK---------------------NRVKMVS--DFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKC 396 (805)
Q Consensus 341 ~~~-g~~l~~~---------------------~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 396 (805)
+++ +..+... .++.+.. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 156 MFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp EEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEE
Confidence 994 3221110 1111111 022346999999999999999999999999888899888
Q ss_pred Eec
Q psy2166 397 FGK 399 (805)
Q Consensus 397 ~~~ 399 (805)
...
T Consensus 236 ~~~ 238 (268)
T 3mj6_A 236 VQD 238 (268)
T ss_dssp ECC
T ss_pred EcC
Confidence 543
No 315
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.68 E-value=2.9e-16 Score=155.58 Aligned_cols=172 Identities=12% Similarity=0.203 Sum_probs=110.4
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEEc---------------cCCCceEEEE-eCcEEEEEEcccCcCCceEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKPI---------------FHKNRVKMVS-DFGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~l---------------~~~~~~~~~~-~~~~~~l~i~~v~~~d~G~Y 377 (805)
+.+|+.++|.|. . +.|.+.|.|+|+ +..+ ....++.+.. ......|.|.+++.+|+|.|
T Consensus 12 v~~G~~v~L~C~-~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y 88 (238)
T 2p1y_A 12 AVTGGKVTLSCN-Q--TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVY 88 (238)
T ss_dssp EETTCCEEEEEE-E--CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEE
T ss_pred EeCCCEEEEEee-c--CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeE
Confidence 889999999999 5 778899999995 2111 1133555543 23445799999999999999
Q ss_pred EEEEEeCceeeE-----EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 378 VCRAWNKYGEDF-----TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 378 ~C~a~n~~g~~~-----~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
.|.|.|..|... ....|.|...+... .|+..
T Consensus 89 ~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~----~p~~~---------------------------------------- 124 (238)
T 2p1y_A 89 FCASGDLGQTNERLFFGHGTKLSVLGSADDA----KKDAA---------------------------------------- 124 (238)
T ss_dssp EEEEEC------CEEECCCEEEEEECCCHHH----HHHHH----------------------------------------
T ss_pred EEEEEeCCCccccceeCCCeEEEEeccCCCC----cCCcc----------------------------------------
Confidence 999998765211 22455554221100 00000
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEW 532 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W 532 (805)
...+.+...+.. ..+.+|++++|.|.+. +.|.+.+.|
T Consensus 125 ----------------------------------------~~~~~v~~~p~~-~~v~~G~~v~L~C~~~--~~p~~~i~W 161 (238)
T 2p1y_A 125 ----------------------------------------KKDGQVRQSPQS-LTVWEGETAILNCSYE--NSAFDYFPW 161 (238)
T ss_dssp ----------------------------------------HHHTCCEEECSE-EEEETTSCEEEEEECC--CTTCCEEEE
T ss_pred ----------------------------------------cceeeEEccCce-EEEeCCCeEEEEEEEe--cCCCCcEEE
Confidence 001133333333 2388999999999998 677889999
Q ss_pred EECC--E---Ec---------cCCCceEEEe--eCCEEEEEEccCCCCCCEEEEEEEEcCC
Q psy2166 533 FYNG--K---KL---------PHGHRYRTFH--DFGIVILDILYCYEENSGVYECRATNKY 577 (805)
Q Consensus 533 ~~~g--~---~l---------~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 577 (805)
+|++ . .+ ..+.++.+.. ..+...|.|.+++.+|+|.|+|.|.|..
T Consensus 162 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 162 YQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred EEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 9964 1 11 1134555442 3346689999999999999999999974
No 316
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.68 E-value=2.8e-15 Score=141.54 Aligned_cols=161 Identities=11% Similarity=0.094 Sum_probs=112.2
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTST 154 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 154 (805)
.+.|.+|++++|+|.+ +...|.+.|+|++.+..+ ++... +.....|.|.+++.+|+|.|.|.|.|..+.....+
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 3699999999999999 322333399999966544 23222 24456899999999999999999999998888889
Q ss_pred EEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCC-
Q psy2166 155 TIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQ- 233 (805)
Q Consensus 155 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p- 233 (805)
.|+|..+|.... + .+ . .+.+|+.+ |.|.+.. ..|
T Consensus 90 ~ltV~~~P~~~~--------------------------------------i--~~-~--~~~~g~~~-l~C~a~g-~~P~ 124 (210)
T 1gsm_A 90 QLLVYAFPNQLT--------------------------------------V--SP-A--ALVPGDPE-VACTAHK-VTPV 124 (210)
T ss_dssp EEEEEBCCSEEE--------------------------------------E--ES-S--SBCTTCCE-EEEEEEE-EBCC
T ss_pred EEEEEecCCCcE--------------------------------------E--cc-c--eEEeCCce-EEEEeCC-CCCC
Confidence 999986553211 1 11 1 25577778 9999853 235
Q ss_pred ---CeEEEEEECCEEccCCCcEE--EEE--------EcC----eEEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 234 ---TMTVEFLYNGKPIEASHRIR--TVH--------AFG----MVVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 234 ---~~~i~W~k~g~~l~~~~~~~--~~~--------~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
.++|.|||+|++|....... ... ... .++|.+.....+|.+.|+|.|.+..-.
T Consensus 125 ~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~ 194 (210)
T 1gsm_A 125 DPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPG 194 (210)
T ss_dssp CTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETT
T ss_pred CCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCC
Confidence 46999999999996543111 100 111 245666677777788999999985433
No 317
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.68 E-value=2.2e-16 Score=154.91 Aligned_cols=182 Identities=10% Similarity=0.039 Sum_probs=116.4
Q ss_pred CCCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Ee---c---C-----------CCCceEEEec--CcEEEEEEc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KP---L---E-----------LGSRFKTTAD--FGFVTLDLT 129 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~---i---~-----------~~~~~~~~~~--~~~~~L~I~ 129 (805)
+..+.+.+|++++|.|.+. +.+ .+.|.|+|++ .. + . ...|+.+..+ ++..+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKAS--GYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp CSEEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCCeEEcCCCCEEEEEEec--CCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 4467899999999999998 444 6789999953 21 1 0 1357777654 457799999
Q ss_pred ccccCCCeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 130 EVYDRDQGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 130 ~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
+++.+|+|.|.|.+.+..+.. ...+.|.|.... ..+|.+...
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~P~v~~~ 127 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK-------------------------------------TTAPSVYPL 127 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSSC-------------------------------------CBCCEEEEE
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCCC-------------------------------------CCCCEEEEe
Confidence 999999999999999864322 123466665311 023443332
Q ss_pred cccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccC--CCcEEEE-EEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 209 FQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEA--SHRIRTV-HAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 209 ~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~--~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
.+.. .+.+|+.++|.|.+.. ..|.+ .+.|+++|..+.. ....... .....+.|.|..+..+| |.|+|.|.|..
T Consensus 128 ~~~~-~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~ 204 (227)
T 1mju_H 128 APVC-GDTSGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPA 204 (227)
T ss_dssp CCCC-------CEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGG
T ss_pred cCCc-cccCCCcEEEEEEeec-EeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECC
Confidence 2221 2568999999999842 23655 9999999876531 1111100 00013579999998888 99999999987
Q ss_pred eeEEEEEEEEEe
Q psy2166 285 GQAEISVNLECV 296 (805)
Q Consensus 285 g~~~~~~~l~v~ 296 (805)
+.......+.+.
T Consensus 205 ~~~~~~~~~~~~ 216 (227)
T 1mju_H 205 SSTKVDKKIEPR 216 (227)
T ss_dssp GTEEEEEECCCC
T ss_pred CCcceEEEeCCC
Confidence 766655555443
No 318
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.68 E-value=1.8e-14 Score=135.92 Aligned_cols=213 Identities=13% Similarity=0.226 Sum_probs=142.0
Q ss_pred ccCCCeEEEEEEEeecCCC---CcEEEEEECCEEccCCCceEEEEeCcEEEEEEcccCcCCceEEEEEEEeCceeeEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDP---ELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRA 392 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p---~~~v~W~~~g~~l~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 392 (805)
+..|+.++|.|.+.+ +.| ...++|+|||..+..... .|.|..+...|+|.|+|.+.+..|....+.
T Consensus 14 i~~GdsVTLTatVaG-GkP~pspyTYqWyKDG~~IsGaT~----------tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs 82 (304)
T 3shs_A 14 FLAGDGFTLTATVAG-DEPLPSNLTYTWTKDDQPHENNTA----------TLTVADATSENAGSYKVTVQDTDTMTSVES 82 (304)
T ss_dssp BCTTCCEEEEEEEEE-SSSCCCCEEEEEEETTEECSCCSS----------EEEESSCCGGGCEEEEEEEEETTTCCEEEC
T ss_pred ccCCCCEEEEEEecC-CCCCCCCceEEEEECCccccCCcc----------eEEeeeccccCCeEEEEEEEECCCCeeeee
Confidence 779999999999985 777 568999999998764321 578888999999999999999888765554
Q ss_pred EEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEE
Q psy2166 393 TIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCE 472 (805)
Q Consensus 393 ~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 472 (805)
.+.|....
T Consensus 83 ~VtVT~~a------------------------------------------------------------------------ 90 (304)
T 3shs_A 83 EVFLMEEA------------------------------------------------------------------------ 90 (304)
T ss_dssp CCEEECBC------------------------------------------------------------------------
T ss_pred eEEEeccC------------------------------------------------------------------------
Confidence 44443211
Q ss_pred EeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEE--eeCCCC-----CcEEEEEECCEEccCCCce
Q psy2166 473 LFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARL--TPVTDP-----DLVVEWFYNGKKLPHGHRY 545 (805)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v--~~~g~p-----~~~v~W~~~g~~l~~~~~~ 545 (805)
.+.+....+....+..|..+.|.+.+ .+ |.| ..++.|+|||..+....
T Consensus 91 ----------------------~l~i~it~P~s~~vssg~sVtL~aTVt~SG-GtppA~~~~yTYQWyKngt~IsgAq-- 145 (304)
T 3shs_A 91 ----------------------ELIVNITEPQHFYVSSQTDVELHATVKFSG-GKTPADNYELHYSWSKGEDVIDTTQ-- 145 (304)
T ss_dssp ----------------------CEEEEESSCSEEEECSSCCEEEEEEEEETT-SCCSSTTCCCEEEEEETTEEEESSS--
T ss_pred ----------------------ceeEEecCCCceeccCCCeEEEEEEEeccC-CCCcccCCCceeEEeeCCeEccCcc--
Confidence 11222222222235567889999988 54 444 57999999998775432
Q ss_pred EEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEE--EEEEEeee---eee---------------------eec--
Q psy2166 546 RTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK--ASLKCVSK---TNL---------------------ILE-- 597 (805)
Q Consensus 546 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~---~~~---------------------~~~-- 597 (805)
.|++......++|.|+|++.|..+....+ +.+.+..- ..+ +++
T Consensus 146 ---------~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (304)
T 3shs_A 146 ---------DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDS 216 (304)
T ss_dssp ---------EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEEEECCSCC
T ss_pred ---------ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEeeccccCC
Confidence 37888888899999999999998744333 33322211 111 000
Q ss_pred CCCC----eEEEEE--CCEEcc---------CCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEe
Q psy2166 598 SQLP----EVEWFY--NGKKLP---------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648 (805)
Q Consensus 598 ~~~p----~v~W~~--~g~~l~---------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 648 (805)
.-.| .+.|+. .|+.-+ .-..+.+..++. |.-..+..+|...|+|.|.-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 217 SGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH---LFKESATYDDTAKFWCVAKL 279 (304)
T ss_dssp TTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSC---EEESSCCGGGCEEEEEEEEE
T ss_pred CCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCcc---eeecccccccchheeeHHHH
Confidence 1123 678884 333211 112355555554 77788899999999999864
No 319
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.68 E-value=1.4e-16 Score=156.30 Aligned_cols=174 Identities=16% Similarity=0.163 Sum_probs=116.2
Q ss_pred CCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Eec-----------------CCCCceEEEec--CcEEEEEEcc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KPL-----------------ELGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~i-----------------~~~~~~~~~~~--~~~~~L~I~~ 130 (805)
+.+.+.+|++++|.|.+. +.+ .+.|.|+|+. ..+ ....|+.+..+ .+..+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVS--NFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp CCEEEETTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCeEecCCCCEEEEEEec--CcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 357899999999999998 344 6789999852 211 12357877654 4567999999
Q ss_pred cccCCCeEEEEEEEeCCe-----e---EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCC
Q psy2166 131 VYDRDQGIYTCRAWNLAG-----E---TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRP 202 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g-----~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (805)
++.+|+|.|.|.+.+..| . ....+.|.|...+ ..+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~ 128 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAS-------------------------------------TKG 128 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCS-------------------------------------CBC
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEecccCC-------------------------------------CcC
Confidence 999999999999998754 1 1124567765421 023
Q ss_pred CceecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEEEE
Q psy2166 203 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYT 277 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~ 277 (805)
|.+....+.. .+.+|+.++|.|.+.. ..|.+ .+.|+++|..+...........++ .+.|.|.+...+| |.|+
T Consensus 129 P~v~~~~~~~-~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~ 205 (225)
T 1op3_H 129 PSVFPLAPSS-KSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 205 (225)
T ss_dssp CEEEEECCCT-TCCCCCEEEEEEEEEE-EBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCC
T ss_pred CeEEEecccc-cccCCCcEEEEEEEEe-EECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEE
Confidence 4443322221 2568999999999852 33665 999999987642110000111112 2468999888888 9999
Q ss_pred EEEEcCCeeEEE
Q psy2166 278 CRATNKWGQAEI 289 (805)
Q Consensus 278 C~~~n~~g~~~~ 289 (805)
|.|.|..+....
T Consensus 206 C~a~n~~~~~~~ 217 (225)
T 1op3_H 206 CNVNHKPSNTKV 217 (225)
T ss_dssp EEEEEGGGTEEE
T ss_pred EEEEcCCCCccE
Confidence 999997665443
No 320
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.68 E-value=3.1e-16 Score=132.35 Aligned_cols=94 Identities=24% Similarity=0.383 Sum_probs=88.3
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+..+.++.+..+++...|.|.++..+|+|.|+|.|
T Consensus 7 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 83 (103)
T 3qp3_A 7 HAPRITLRMRSH-RVPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVC 83 (103)
T ss_dssp EEEEEEECCCCE-EEETTCCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCcce-EEeCCCeEEEEEEEE--ecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEE
Confidence 578999988888 999999999999999 99999999999999999999998888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEE
Q psy2166 770 TNKWGQAEISVNLECVV 786 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~ 786 (805)
.|..|....++.|.|..
T Consensus 84 ~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 84 TNYKGEASDYATLDVTG 100 (103)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEEC
Confidence 99999999999999864
No 321
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.67 E-value=7.3e-16 Score=157.45 Aligned_cols=180 Identities=14% Similarity=0.185 Sum_probs=117.0
Q ss_pred CCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Eec-----------------CCCCceEEEec--CcEEEEEEcc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KPL-----------------ELGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~i-----------------~~~~~~~~~~~--~~~~~L~I~~ 130 (805)
..+.+.+|++++|.|.+. +.+ .+.|.|+|+. ..+ ....|+.+..+ ++..+|+|.+
T Consensus 30 ~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 30 GPELVKPGASVKMSCKAS--GYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp CCEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred CcEEecCCCCEEEEEecc--CCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 368899999999999998 444 5789999952 211 01246666543 3567899999
Q ss_pred cccCCCeEEEEEEEeCC-e--eE--EEEEEEEEeccc-c-ccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCC
Q psy2166 131 VYDRDQGIYTCRAWNLA-G--ET--FTSTTIYCSTKE-S-LIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPP 203 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~-g--~~--~~~~~l~V~~~~-~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 203 (805)
++.+|+|.|+|.+.+.. | .. ...+.|.|.... . ....... ....++
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~---------------------------~~~~~~ 160 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSG---------------------------GGGSDL 160 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC-------------------------------------------CC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCC---------------------------CCCccc
Confidence 99999999999999874 2 11 123456665310 0 0000000 000123
Q ss_pred ceecccccccccCCCceEEEEEEEeeCCCCCe------EEEEEEC--CEEcc------------CCCcEEEEEEcCeEEE
Q psy2166 204 QFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM------TVEFLYN--GKPIE------------ASHRIRTVHAFGMVVL 263 (805)
Q Consensus 204 ~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~------~i~W~k~--g~~l~------------~~~~~~~~~~~~~~~L 263 (805)
.+...+... .+.+|++++|.|.+ .+.+.+ .+.|||+ |..+. ...++..........|
T Consensus 161 ~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L 237 (291)
T 2gki_A 161 VMSQSPSSL-AVSAGEKVTMSCKS--SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTL 237 (291)
T ss_dssp CEECSCSEE-EEETTSCEEEEEEE--SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEE
T ss_pred eEEcCCCEE-EEcCCCcEEEEEEc--CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEE
Confidence 344333333 47899999999998 566655 8999996 32111 1345555445556789
Q ss_pred EEcCCCCcccEEEEEEEEcCCe
Q psy2166 264 EILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 264 ~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
.|.+++.+|+|.|+|.+.|...
T Consensus 238 ~I~~v~~~DsG~Y~C~a~~~~~ 259 (291)
T 2gki_A 238 TISSVQAEDLAVYYCKQSYYHM 259 (291)
T ss_dssp EESSCCGGGCEEEEEEEEETTE
T ss_pred EECCCCHHHCEEEEEEEccCCc
Confidence 9999999999999999998643
No 322
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.67 E-value=2.3e-16 Score=154.13 Aligned_cols=178 Identities=13% Similarity=0.175 Sum_probs=118.8
Q ss_pred CCCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Ee---c---C-------------CCCceEEEec--CcEEEEE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KP---L---E-------------LGSRFKTTAD--FGFVTLD 127 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~---i---~-------------~~~~~~~~~~--~~~~~L~ 127 (805)
+..+.+.+|+.++|.|.+. +.+ .+.|.|+|++ .. + . ...|+.+..+ .+..+|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 84 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVAS--GFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQ 84 (220)
T ss_dssp ECCEEECTTCCEEEEEEEE--SSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred cCCEEEcCCCeEEEEEEEc--CCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEE
Confidence 3467899999999999998 344 6899999953 21 1 0 1357777653 3567899
Q ss_pred EcccccCCCeEEEEEEEeCCeeE-E--EEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCc
Q psy2166 128 LTEVYDRDQGIYTCRAWNLAGET-F--TSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQ 204 (805)
Q Consensus 128 I~~~~~~D~G~Y~C~a~n~~g~~-~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 204 (805)
|.+++.+|+|.|+|.+.+..+.. . ..+.|.|.... ..+|.
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~ 127 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT-------------------------------------TTAPS 127 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC-------------------------------------CBCCE
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCC-------------------------------------CCCCe
Confidence 99999999999999999875321 1 34566665311 12354
Q ss_pred eecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEcc--CCCcEEEE-EEcCeEEEEEcCCCCcccEEEEEEE
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIE--ASHRIRTV-HAFGMVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~--~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
+....+.. .+.+|+.++|.|.+. ...|.| .+.|++++..+. ........ .-.....|.|.+...+| |.|+|.|
T Consensus 128 i~~~~~~~-~~~~g~~v~L~C~~~-g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a 204 (220)
T 1pz5_B 128 VYPLVPGC-SDTSGSSVTLGCLVK-GYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNV 204 (220)
T ss_dssp EEEECCCS-CCSCSSSEEEEEEEE-EEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEE
T ss_pred EEEccccc-ccCCCCcEEEEEEEE-EEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEE
Confidence 44333222 367899999999984 233777 999999886421 00100000 00013578998888866 9999999
Q ss_pred EcCCeeEEEEEE
Q psy2166 281 TNKWGQAEISVN 292 (805)
Q Consensus 281 ~n~~g~~~~~~~ 292 (805)
.|..+..+.++.
T Consensus 205 ~n~~~~~~~~~~ 216 (220)
T 1pz5_B 205 AHPASKVDLIKE 216 (220)
T ss_dssp EEGGGTEEEEEE
T ss_pred EECCccEeeeec
Confidence 999887666554
No 323
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.67 E-value=3.8e-16 Score=155.50 Aligned_cols=178 Identities=15% Similarity=0.129 Sum_probs=118.0
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe--------------cCCCCceEEEec-CcEEEEEEcccccC
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP--------------LELGSRFKTTAD-FGFVTLDLTEVYDR 134 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~--------------i~~~~~~~~~~~-~~~~~L~I~~~~~~ 134 (805)
.+..+.+.+|+.++|.|.+. +.+.+.|.|+|. +.. .....|+.+..+ .+.++|.|.+++.+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~ 84 (245)
T 3nfj_J 7 WPATLVQPVGSPLSLECTVE--GTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLS 84 (245)
T ss_dssp ECSEEEEETTCCEEEEEEEE--SCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGG
T ss_pred CCceEEecCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChh
Confidence 34467899999999999998 578889999992 211 112357766653 46779999999999
Q ss_pred CCeEEEEEEEeCCe------eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 135 DQGIYTCRAWNLAG------ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 135 D~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
|+|.|+|.+.+..| .......|.|..... ...+|.+...
T Consensus 85 D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~-----------------------------------~~~~P~v~~~ 129 (245)
T 3nfj_J 85 DSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLN-----------------------------------KVFPPEVAVF 129 (245)
T ss_dssp GCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGG-----------------------------------GCBCCEEEEE
T ss_pred hCEEEEEEEeeccCCCceeEEECCCeEEEEEcccC-----------------------------------CCCCCceEee
Confidence 99999999998321 222334566653110 0134555443
Q ss_pred cccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-------EcC----eEEEEEcCCCCcc-cEEE
Q psy2166 209 FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH-------AFG----MVVLEILGTKIED-TGVY 276 (805)
Q Consensus 209 ~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~-------~~~----~~~L~i~~~~~~d-~G~Y 276 (805)
......+.+|+.++|.|.+.....+.+.+.|+++|..+.......... .++ ...|.|.....+| .|.|
T Consensus 130 ~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~Y 209 (245)
T 3nfj_J 130 EPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 209 (245)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEE
T ss_pred cCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeE
Confidence 333333556999999999853223445899999999986542211000 112 2478888877777 6799
Q ss_pred EEEEEcCCee
Q psy2166 277 TCRATNKWGQ 286 (805)
Q Consensus 277 ~C~~~n~~g~ 286 (805)
+|.|.|....
T Consensus 210 tC~v~~~~~~ 219 (245)
T 3nfj_J 210 RCQVQFYGLS 219 (245)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEECCCC
Confidence 9999987543
No 324
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.67 E-value=7.2e-16 Score=156.52 Aligned_cols=183 Identities=16% Similarity=0.162 Sum_probs=118.7
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--EecC-----------------CCCceEEEe--cCcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPLE-----------------LGSRFKTTA--DFGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i~-----------------~~~~~~~~~--~~~~~~L~I~~~ 131 (805)
+..+.+.+|++|+|.|.+.+...+.+.+.|+|.. ..+. ...|+.+.. ..+.++|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 4578899999999999998432366889999832 1110 124777763 456779999999
Q ss_pred ccCCCeEEEEEEEeC---------CeeEEEEEEEEEec-cccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCC
Q psy2166 132 YDRDQGIYTCRAWNL---------AGETFTSTTIYCST-KESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGR 201 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~---------~g~~~~~~~l~V~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (805)
+.+|+|.|+|.+.+. .........|.|.. ...... . .......
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~-----~----------------------~~~~~~~ 139 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGG-----G----------------------GSGGGGI 139 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC-----------------------------------------C
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCC-----C----------------------CCCceEe
Confidence 999999999999886 11122344566543 110000 0 0000012
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc------------CCCcEEEEEEcCeEEEEEcC
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILG 267 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~i~~ 267 (805)
+|.+...+. ..+.+|++++|.|.+.....+.+.+.|||. +..+. ...++..........|.|.+
T Consensus 140 ~~~v~~~p~--~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 217 (280)
T 3fku_X 140 QPGLTQPPS--VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITG 217 (280)
T ss_dssp CCSBBCCSE--EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECS
T ss_pred eeEEEeCCc--EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECC
Confidence 344444444 358899999999998421222478999983 32221 12455555556678899999
Q ss_pred CCCcccEEEEEEEEcCC
Q psy2166 268 TKIEDTGVYTCRATNKW 284 (805)
Q Consensus 268 ~~~~d~G~Y~C~~~n~~ 284 (805)
++.+|+|.|.|.+.+..
T Consensus 218 v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 218 LQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CCGGGCSEEEEEEEETT
T ss_pred CCHHHCEEEEEEEecCC
Confidence 99999999999999875
No 325
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=4.4e-16 Score=130.30 Aligned_cols=94 Identities=24% Similarity=0.275 Sum_probs=85.3
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEE-eeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTV-HAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+....++.+. ..++...|.|.++..+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 4 EAPKIFERIQSQ-TVGQGSDAHFRVRVV--GKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCceEecCcce-EEcCCCcEEEEEEEE--EeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEE
Confidence 688999988888 999999999999999 9999999999999999988776653 456778999999999999999999
Q ss_pred EEcCCccEEEEEEEEEEE
Q psy2166 769 ATNKWGQAEISVNLECVV 786 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~ 786 (805)
|.|..|....++.|.|..
T Consensus 81 a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 81 AINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCcEEEEEEEEEec
Confidence 999999999999999863
No 326
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.66 E-value=9e-16 Score=152.98 Aligned_cols=175 Identities=17% Similarity=0.252 Sum_probs=114.7
Q ss_pred ccCCCeEEEEEEEeecCCC-----CcEEEEEECC--EE---cc---------CCCceEEEEeCcEEEEEEcccCcCCceE
Q psy2166 316 LKDGDSAHFECTLTPVNDP-----ELKVEWFHNG--KP---IF---------HKNRVKMVSDFGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p-----~~~v~W~~~g--~~---l~---------~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 376 (805)
+.+|+.++|.|.+. +.+ .+.+.|+|+. .. +. ...++.+........|.|.+++.+|+|.
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 90 (247)
T 1svz_A 13 VSLGDQASISCRSS--QTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGI 90 (247)
T ss_dssp ECTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred ecCCCCEEEEEeCC--CcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEE
Confidence 88999999999997 666 6899999842 21 11 1356776666677789999999999999
Q ss_pred EEEEEEeCceeeE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceE
Q psy2166 377 YVCRAWNKYGEDF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA 455 (805)
Q Consensus 377 Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (805)
|.|.+.|..+... ..+.|.|..++.... .+
T Consensus 91 Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~---~~---------------------------------------------- 121 (247)
T 1svz_A 91 YYCFQGSHFPPTFGGGTKLEIKGGGGSGG---GG---------------------------------------------- 121 (247)
T ss_dssp EEEEECSSSSCEECCCEEEEEC----------------------------------------------------------
T ss_pred EEEEEccCCccEECCCEEEEEECCccccc---cc----------------------------------------------
Confidence 9999998765322 235666643210000 00
Q ss_pred EEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEEC
Q psy2166 456 HFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYN 535 (805)
Q Consensus 456 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~ 535 (805)
.....++.+....+... +.+|++++|.|.+.+...+.+.+.|+|+
T Consensus 122 ----------------------------------~~~~~~~~~~~~~~~~~-v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 122 ----------------------------------SGGGGSEVQLQQSGPEL-KKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp ----------------------------------------CCEEEECCCEE-ECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ----------------------------------cccccCceEEeCCCcee-ecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 00001222222333333 8999999999999942223579999996
Q ss_pred C--EEc------c-----------CCCceEEEe--eCCEEEEEEccCCCCCCEEEEEEEEcC
Q psy2166 536 G--KKL------P-----------HGHRYRTFH--DFGIVILDILYCYEENSGVYECRATNK 576 (805)
Q Consensus 536 g--~~l------~-----------~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 576 (805)
+ ..+ . ...++.+.. ......|.|.+++.+|+|.|.|.|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 167 APGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 3 211 0 134565543 345678999999999999999999985
No 327
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.66 E-value=1.4e-15 Score=153.57 Aligned_cols=183 Identities=15% Similarity=0.186 Sum_probs=113.9
Q ss_pred CCCceecCCCcEEEEEEEecCCCC-----CceEEEEECC--Eec---C---------CCCceEEEecCcEEEEEEccccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP-----NLKIEWIFNG--KPL---E---------LGSRFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p-----~~~v~W~k~g--~~i---~---------~~~~~~~~~~~~~~~L~I~~~~~ 133 (805)
+..+.+.+|++++|.|.+. +.+ .+.|.|+|+. ..+ . ...|+.+..+++..+|+|.+++.
T Consensus 22 p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 99 (268)
T 1x9q_A 22 PLSLPVSLGDQASISCRSS--QSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEA 99 (268)
T ss_dssp CSEECCCTTCCEEEEEEES--SCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred CCeEEecCCCCEEEEeEec--CCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCCh
Confidence 3467899999999999998 444 5799999852 211 0 24688877667778999999999
Q ss_pred CCCeEEEEEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCC-----ceec
Q psy2166 134 RDQGIYTCRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPP-----QFTS 207 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~~~~ 207 (805)
+|+|.|+|.+.|..+.. .....|.|...+.......+|.... . ...| .+..
T Consensus 100 ~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~----------------------~-~~~~~~~~~v~~~ 156 (268)
T 1x9q_A 100 EDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDA----------------------K-KDDAKKDGGVKLD 156 (268)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEC-----------------------------------------------CGGGCEEE
T ss_pred hHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccc----------------------c-ccccccccceEEE
Confidence 99999999999875422 2234566554321000000000000 0 0000 1122
Q ss_pred ccccccccCCCceEEEEEEEeeCCCC--CeEEEEEEC--CEEc-------------------cCCCcEEEEEEc--CeEE
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQ--TMTVEFLYN--GKPI-------------------EASHRIRTVHAF--GMVV 262 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p--~~~i~W~k~--g~~l-------------------~~~~~~~~~~~~--~~~~ 262 (805)
.+... .+.+|++++|.|.+. +.+ .+.+.|||+ +..+ ....++...... ....
T Consensus 157 ~~~~~-~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 233 (268)
T 1x9q_A 157 ETGGG-LVQPGGAMKLSCVTS--GFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVY 233 (268)
T ss_dssp EECCE-EECTTCCEEEEEEEE--SSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred CCCce-EecCCCcEEEEEEec--CccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEE
Confidence 22222 488999999999984 443 389999985 2221 112355444332 3578
Q ss_pred EEEcCCCCcccEEEEEEEEcC
Q psy2166 263 LEILGTKIEDTGVYTCRATNK 283 (805)
Q Consensus 263 L~i~~~~~~d~G~Y~C~~~n~ 283 (805)
|.|.+++.+|+|.|+|.+.+.
T Consensus 234 L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 234 LQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEET
T ss_pred EEECCCCHHHCEEEEEEEccC
Confidence 999999999999999999874
No 328
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.66 E-value=6.5e-16 Score=150.34 Aligned_cols=178 Identities=10% Similarity=0.080 Sum_probs=113.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--E---Ec-------------cCCCceEEEEeCcEEEEEEcccCcCCceEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--K---PI-------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~---~l-------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 377 (805)
+.+|+.++|.|.+.+...+.+.+.|+|.. . .+ ....++.+....+...|.|.+++.+|+|.|
T Consensus 11 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 90 (215)
T 3nl4_H 11 VTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTATY 90 (215)
T ss_dssp ECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCEEE
T ss_pred EcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCEEE
Confidence 78999999999997323446789999732 1 11 123567776667778899999999999999
Q ss_pred EEEEEeCcee----eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCc
Q psy2166 378 VCRAWNKYGE----DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 453 (805)
Q Consensus 378 ~C~a~n~~g~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (805)
.|.+.+..+. ....+.|.|..
T Consensus 91 ~C~~~~~~~~~~~~~~~~~~l~V~~------------------------------------------------------- 115 (215)
T 3nl4_H 91 FCVRKYGSEWGGDLWGPGTLVTVSS------------------------------------------------------- 115 (215)
T ss_dssp EEEEECSSSSCEEEECCCEEEEECS-------------------------------------------------------
T ss_pred EEEEecCCCccceEEcCCEEEEEeC-------------------------------------------------------
Confidence 9999987542 22224455431
Q ss_pred eEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEE
Q psy2166 454 SAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWF 533 (805)
Q Consensus 454 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~ 533 (805)
....+|.+....+... +.+|+.++|.|.+.+...+.+.+.|+
T Consensus 116 -------------------------------------~~~~~P~i~~~~~~~~-~~~g~~v~l~C~~~~~~p~~~~v~W~ 157 (215)
T 3nl4_H 116 -------------------------------------GQPKAPSVFPLAPCCG-DTPSSTVTLGCLVKGYLPEPVTVTWN 157 (215)
T ss_dssp -------------------------------------SCCBCCEEEEECCCTT-CCC--CEEEEEEEEEEBSSCCEEEEG
T ss_pred -------------------------------------CCcCCCEEEEecCCcc-ccCCCcEEEEEEEeeeeCCCeEEEEe
Confidence 1124566654444333 67899999999999643346689999
Q ss_pred ECCEEccCCCceEEEe-eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEE
Q psy2166 534 YNGKKLPHGHRYRTFH-DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 534 ~~g~~l~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 587 (805)
++|..+.......... ++.........+...| |.|+|.|.|..|.......|.
T Consensus 158 ~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 158 SGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred eCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 9997653211111122 2332232223455677 999999999998877666554
No 329
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.66 E-value=5.7e-16 Score=157.26 Aligned_cols=155 Identities=15% Similarity=0.134 Sum_probs=97.3
Q ss_pred CCEEEEEeccCCCCCcEEEEEEEEeC---------CcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCee
Q psy2166 624 FGIVILDILYCYEENSGVYECRATNK---------YGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQF 694 (805)
Q Consensus 624 ~~~~~L~i~~~~~~d~G~Y~C~a~n~---------~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~ 694 (805)
++...|.|.+++.+|+|.|.|.+.|. .........|.|...+.... .........+|.+
T Consensus 76 ~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~------------~~~~~~~~~~~~v 143 (280)
T 3fku_X 76 TRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSG------------GGGSGGGGIQPGL 143 (280)
T ss_dssp TTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------------------CCCSB
T ss_pred CCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccC------------CCCCCceEeeeEE
Confidence 35567999999999999999999987 11122344566653000000 0000001134555
Q ss_pred eecCCcccccCCCCeEEEEEEEeecC-CC-CeEEEEEEC--CEEcc------------CCCCeEEEeeCcEEEEEEcCCC
Q psy2166 695 TSEFQHLSNLSEGEIAHFEASLIPVG-DQ-TMTVEFLYN--GKPIE------------ASHRIRTVHAFGMVVLEILGTK 758 (805)
Q Consensus 695 ~~~~~~~~~v~~G~~~~l~C~~~~~g-~p-~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~i~~v~ 758 (805)
...+. . .+.+|++++|.|.+. + .+ .+.+.|+|. +..+. ...|+.+..++....|+|.+++
T Consensus 144 ~~~p~-~-~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 219 (280)
T 3fku_X 144 TQPPS-V-SKGLRQTATLTCTGN--SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQ 219 (280)
T ss_dssp BCCSE-E-EECTTCCEEEEEECC--CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCC
T ss_pred EeCCc-E-EEecCCCEEEEEEec--CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCC
Confidence 55555 5 899999999999998 6 44 479999982 32221 1356777777778899999999
Q ss_pred CCCCEEEEEEEEcCCcc---EEEEEEEEEEEeCCCcceE
Q psy2166 759 IEDTGVYTCRATNKWGQ---AEISVNLECVVWSPSQTKL 794 (805)
Q Consensus 759 ~~d~G~Y~C~a~N~~G~---~~~~~~l~V~~~~~~~~~~ 794 (805)
.+|+|.|.|.|.|..+. ....+.|+|...++..+.+
T Consensus 220 ~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v 258 (280)
T 3fku_X 220 PEDEADYYCSTWDSSLSAVVFGGGTKLTVLGQPKAAPSA 258 (280)
T ss_dssp GGGCSEEEEEEEETTTTEEEEBCCCEEEEC---------
T ss_pred HHHCEEEEEEEecCCCCceEECCCEEEEECCCCCCCCcE
Confidence 99999999999998732 3344577776655444333
No 330
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.66 E-value=7.6e-16 Score=143.13 Aligned_cols=136 Identities=16% Similarity=0.182 Sum_probs=99.8
Q ss_pred CCCeEEEEECCEEccC------------CCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcceEEEEEEEEeeccc
Q psy2166 599 QLPEVEWFYNGKKLPH------------GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 666 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~~------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 666 (805)
|.+.+.|+|++..+.. ..++.+...+ ..|.|.+++.+|+|.|+|.|.|..| ...+.|.|.+++
T Consensus 22 ~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~--~sL~I~~v~~~DsG~Y~C~~~n~~~--~~~~~L~V~~~~- 96 (171)
T 1ccz_A 22 PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVS--GSLTIYNLTSSDEDEYEMESPNITD--TMKFFLYVLEMV- 96 (171)
T ss_dssp CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTT--CCEEECSCCGGGCEEEEEECTTCCS--CEEEEEEEECCC-
T ss_pred CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCC--CeEEECCCChhhCceEEEEEeCCCC--cEEEEEEEECcC-
Confidence 5789999998875421 1233332222 3599999999999999999999888 677888887643
Q ss_pred cccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEee
Q psy2166 667 LILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA 746 (805)
Q Consensus 667 ~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~ 746 (805)
..|.+..... . ..|.|.+. |.|.|.++|+|+|..+....+.
T Consensus 97 -----------------------~~p~i~~~~~---~------~~L~C~~~--~~p~p~i~W~~~~~~l~~~~~~----- 137 (171)
T 1ccz_A 97 -----------------------SKPMIYWECS---N------ATLTCEVL--EGTDVELKLYQGKEHLRSLRQK----- 137 (171)
T ss_dssp -----------------------CCCEEEEETT---T------TEEEEECS--SCSSCEEEEEETTEEEEEESSS-----
T ss_pred -----------------------CCCEEEEecC---C------cEEEEEeC--CCCCcEEEEEECCEECcCCcce-----
Confidence 3466553222 1 27999998 8899999999999988654332
Q ss_pred CcEEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEE
Q psy2166 747 FGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 784 (805)
Q Consensus 747 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 784 (805)
.|.+. ..+|+|.|+|.|.|.+|..+.++.|.+
T Consensus 138 ----~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~c 169 (171)
T 1ccz_A 138 ----TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVVNC 169 (171)
T ss_dssp ----EEEEE--CSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred ----EEEEe--ccCCCceEEEEEEcccCcccceeEEeC
Confidence 24443 377999999999999999888776643
No 331
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.66 E-value=1.3e-15 Score=155.53 Aligned_cols=196 Identities=16% Similarity=0.165 Sum_probs=121.3
Q ss_pred ccccCCCeEEEEEEEeeCCCC--CcEEEEEECC--EEcc-----------------CCCceEEEee--CCEEEEEEccCC
Q psy2166 506 TQLKEGQSAHFEARLTPVTDP--DLVVEWFYNG--KKLP-----------------HGHRYRTFHD--FGIVILDILYCY 562 (805)
Q Consensus 506 ~~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~g--~~l~-----------------~~~~~~~~~~--~~~~~L~i~~v~ 562 (805)
..+.+|++++|.|.+. +.| .+.+.|+|++ ..+. ...|+.+..+ ++...|.|.+++
T Consensus 32 ~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 32 ELVKPGASVKMSCKAS--GYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp EEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred EEecCCCCEEEEEecc--CCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 3489999999999998 555 5789999852 1110 1245554432 346789999999
Q ss_pred CCCCEEEEEEEEcCC-cceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEE
Q psy2166 563 EENSGVYECRATNKY-GSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641 (805)
Q Consensus 563 ~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 641 (805)
.+|+|.|.|.+.|.. |.....+ . .+ ..|.+.... +.+
T Consensus 110 ~~DsG~Y~C~~~~~~~g~~~~~~----~------------------~~-----------------~~L~V~~~~--~~~- 147 (291)
T 2gki_A 110 SEDSAVYYCARGAYKRGYAMDYW----G------------------QG-----------------TSVTVSSRG--GGG- 147 (291)
T ss_dssp GGGCEEEEEEEECGGGTTCEEEE----C------------------CC-----------------EEEEECC--------
T ss_pred HHHCEEEEEEEecccccccccee----C------------------CC-----------------cEEEEecCC--ccc-
Confidence 999999999999864 2111000 0 00 002221100 000
Q ss_pred EEEEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecCC
Q psy2166 642 YECRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD 721 (805)
Q Consensus 642 Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~ 721 (805)
.|.. .+.-. ..+|.+...+... .+.+|++++|.|.+. +.
T Consensus 148 --------~~~~----~~~~~--------------------------~~~~~v~~~p~~~-~v~~G~~v~L~C~~~--~~ 186 (291)
T 2gki_A 148 --------SGGG----GSGGG--------------------------GSDLVMSQSPSSL-AVSAGEKVTMSCKSS--QS 186 (291)
T ss_dssp -------------------------------------------------CCCEECSCSEE-EEETTSCEEEEEEES--SC
T ss_pred --------cccc----cCCCC--------------------------CccceEEcCCCEE-EEcCCCcEEEEEEcC--Cc
Confidence 0000 00000 0234455555556 899999999999998 88
Q ss_pred CCe------EEEEEEC--CEE---cc---------CCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEE-EE
Q psy2166 722 QTM------TVEFLYN--GKP---IE---------ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI-SV 780 (805)
Q Consensus 722 p~~------~v~W~~~--g~~---l~---------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~-~~ 780 (805)
|.+ .+.|+|+ |.. +. ...++.+..++....|+|.+++.+|+|.|+|.|.|....... -.
T Consensus 187 ~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt 266 (291)
T 2gki_A 187 LFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFGSGT 266 (291)
T ss_dssp CEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred cccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEcCCE
Confidence 876 9999996 321 11 145676666667789999999999999999999996543332 23
Q ss_pred EEEEEE
Q psy2166 781 NLECVV 786 (805)
Q Consensus 781 ~l~V~~ 786 (805)
.|.|..
T Consensus 267 ~l~v~~ 272 (291)
T 2gki_A 267 KLEIKH 272 (291)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 455543
No 332
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.66 E-value=8.6e-16 Score=152.38 Aligned_cols=174 Identities=11% Similarity=0.040 Sum_probs=116.0
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEE--------------CCEecC---CCCceEEEec-CcEEEEEEcccccC
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF--------------NGKPLE---LGSRFKTTAD-FGFVTLDLTEVYDR 134 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k--------------~g~~i~---~~~~~~~~~~-~~~~~L~I~~~~~~ 134 (805)
+..+.+.+|+.++|.|.+. .+.+.|.|+| ++.... ...|+.+..+ .+.++|.|.+++.+
T Consensus 9 p~~v~v~~G~~v~L~C~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~ 85 (240)
T 3q5y_A 9 PRHIIKEKGGRSVLTCIPI---SGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELE 85 (240)
T ss_dssp CSEEEEETTCCEEEEEECC---TTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGG
T ss_pred cceeeecCCCcEEEEEEeC---CCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChh
Confidence 3467899999999999987 3777999999 222111 2357777653 45778999999999
Q ss_pred CCeEEEEEEEeC--C-eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccccc
Q psy2166 135 DQGIYTCRAWNL--A-GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQH 211 (805)
Q Consensus 135 D~G~Y~C~a~n~--~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 211 (805)
|+|.|+|.+.+. . ........|.|..... ...+|.+......
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-----------------------------------~~~~p~~~~~~~~ 130 (240)
T 3q5y_A 86 DSAMYFCASSLRWGDEQYFGPGTRLTVLEDLR-----------------------------------NVTPPKVSLFEPS 130 (240)
T ss_dssp GCEEEEEEEESSTTBCCEECCCEEEEEESCGG-----------------------------------GCBCCEEEEECCC
T ss_pred HCEEEEEEEccCCCcceEEcCCEEEEEecccc-----------------------------------CCCCCeeEEeCCc
Confidence 999999999832 1 2223344566653110 0133544433222
Q ss_pred ccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEE---EEEEcCe----EEEEEcCCCCcc-cEEEEEEEEc
Q psy2166 212 LSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIR---TVHAFGM----VVLEILGTKIED-TGVYTCRATN 282 (805)
Q Consensus 212 ~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~---~~~~~~~----~~L~i~~~~~~d-~G~Y~C~~~n 282 (805)
...+.+|+.++|.|.+.. ..|.+ .+.|+|+|..+....... ....++. +.|.|.....+| .|.|+|.|.|
T Consensus 131 ~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~ 209 (240)
T 3q5y_A 131 KAEIANKQKATLVCLARG-FFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQF 209 (240)
T ss_dssp HHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEE
T ss_pred hhhcccCCceEEEEEEee-EECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEc
Confidence 223567999999999853 24544 899999999986543221 1222332 358899888888 7799999998
Q ss_pred CCe
Q psy2166 283 KWG 285 (805)
Q Consensus 283 ~~g 285 (805)
...
T Consensus 210 ~~~ 212 (240)
T 3q5y_A 210 HGL 212 (240)
T ss_dssp CCB
T ss_pred CCC
Confidence 654
No 333
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.66 E-value=1.9e-15 Score=147.79 Aligned_cols=169 Identities=14% Similarity=0.116 Sum_probs=115.1
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec-------------------CCCCceEEEec--CcEEEEEEcc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL-------------------ELGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i-------------------~~~~~~~~~~~--~~~~~L~I~~ 130 (805)
..+.+.+|+.|+|.|.+.+...+.+.|.|+|. +... ...+|+.+..+ .+.++|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 35789999999999999842223679999983 2111 02357777654 4677899999
Q ss_pred cccCCCeEEEEEEEeCC--eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 131 VYDRDQGIYTCRAWNLA--GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~--g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
++.+|+|.|.|.+.+.. ........|.|.... ..+|.+...
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~p~v~~~ 130 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS-------------------------------------PTSPKVFPL 130 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC-------------------------------------CBCCEEEEE
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCC-------------------------------------CCCCeEEEe
Confidence 99999999999999863 122233456664211 133444422
Q ss_pred cccccccCCCceEEEEEEEeeCCCCC--eEEEEEECCEEccC----------CCcEEEEEEcCeEEEEEcCCCCcccEEE
Q psy2166 209 FQHLSNLSEGEIAHFEASLIPVGDQT--MTVEFLYNGKPIEA----------SHRIRTVHAFGMVVLEILGTKIEDTGVY 276 (805)
Q Consensus 209 ~~~~~~v~~g~~~~l~C~~~~~~~p~--~~i~W~k~g~~l~~----------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 276 (805)
.... . .+|+.++|.|.+.. ..|. +.+.|+++|..+.. ...+.. .+.|.|.....+|+|.|
T Consensus 131 ~~~~-~-~~g~~v~L~C~~~~-~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~y 202 (221)
T 3m8o_H 131 SLCS-T-QPDGNVVIACLVQG-FFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSV 202 (221)
T ss_dssp ECCS-C-CCTTEEEEEEEEEE-EBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEE
T ss_pred cCcc-c-ccCCCEEEEEEEEe-eECCCCEEEEEEECCEECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeE
Confidence 2222 1 68999999999853 2554 69999999977631 122211 23699999999999999
Q ss_pred EEEEEcCCeeE
Q psy2166 277 TCRATNKWGQA 287 (805)
Q Consensus 277 ~C~~~n~~g~~ 287 (805)
+|.|.+..+..
T Consensus 203 tC~v~~~~~~~ 213 (221)
T 3m8o_H 203 TCHVKHYTNPS 213 (221)
T ss_dssp EEEEEETTSCC
T ss_pred EEEEEECCCCc
Confidence 99999987543
No 334
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.66 E-value=2.1e-15 Score=148.42 Aligned_cols=184 Identities=18% Similarity=0.190 Sum_probs=116.7
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---c-------------CCCCceEEEec--CcEEEEEEccccc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---L-------------ELGSRFKTTAD--FGFVTLDLTEVYD 133 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---i-------------~~~~~~~~~~~--~~~~~L~I~~~~~ 133 (805)
+.+.+.+|+.++|.|.+.+.....+.|.|+|. |.. + ...+|+.+..+ ++.++|+|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 35789999999999999842112578999984 221 1 02357877654 4577999999999
Q ss_pred CCCeEEEEEEEe--CCee----EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 134 RDQGIYTCRAWN--LAGE----TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 134 ~D~G~Y~C~a~n--~~g~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
+|+|.|+|.+.+ ..+. ....+.|.|...+ ..+|.+..
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~P~v~~ 130 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS-------------------------------------ASAPTLFP 130 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC-------------------------------------CBCCEEEE
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCC-------------------------------------CCCCceEE
Confidence 999999999983 2111 1223467765421 12344432
Q ss_pred ccccccccCCC-ceEEEEEEEeeCCCCCe-EEEEEE-CCEEccCCCcEEEEEEcC----eEEEEEcCCCC--cccEEEEE
Q psy2166 208 EFQHLSNLSEG-EIAHFEASLIPVGDQTM-TVEFLY-NGKPIEASHRIRTVHAFG----MVVLEILGTKI--EDTGVYTC 278 (805)
Q Consensus 208 ~~~~~~~v~~g-~~~~l~C~~~~~~~p~~-~i~W~k-~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~--~d~G~Y~C 278 (805)
..+.. .+.+| +.++|.|.+. ...|.+ .+.|++ +|..+...........++ .+.|.|..... +|.|.|+|
T Consensus 131 ~~p~~-~~~~g~~~v~L~C~~~-g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC 208 (232)
T 1dn0_B 131 LVSCE-NSPSDTSSVAVGCLAQ-DFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVC 208 (232)
T ss_dssp EECC-------CCSEEEEEEEE-EEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEE
T ss_pred ecccc-ccCCCCCcEEEEEEEE-EEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEE
Confidence 21111 24578 9999999985 234665 999999 998875410000000112 34689988887 88999999
Q ss_pred EEEcCCeeEEEEEEEEEe
Q psy2166 279 RATNKWGQAEISVNLECV 296 (805)
Q Consensus 279 ~~~n~~g~~~~~~~l~v~ 296 (805)
.|.|..+.......+.+.
T Consensus 209 ~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 209 KVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EEECTTCCEEEEEECCC-
T ss_pred EEEeCCCCcceeEecCCC
Confidence 999998887666665543
No 335
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.66 E-value=5.1e-16 Score=152.52 Aligned_cols=178 Identities=16% Similarity=0.144 Sum_probs=115.9
Q ss_pred CCCceecCCCcEEEEEEEecCCCCC----ceEEEEEC--CEec----------------CCCCceEEEec--CcEEEEEE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPN----LKIEWIFN--GKPL----------------ELGSRFKTTAD--FGFVTLDL 128 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~----~~v~W~k~--g~~i----------------~~~~~~~~~~~--~~~~~L~I 128 (805)
+..+.+.+|+.++|.|.+. +.+. +.|.|+|+ +..+ ...+|+.+..+ .+..+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFS--GFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKI 84 (228)
T ss_dssp ECCSEECTTCCEEEEEEEE--SSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEE
T ss_pred CCceeecCCCeEEEEEEEe--CcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEE
Confidence 3467899999999999998 4543 78999984 3221 01347777654 34679999
Q ss_pred cccccCCCeEEEEEEEeCCe------e--E-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCC
Q psy2166 129 TEVYDRDQGIYTCRAWNLAG------E--T-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSED 199 (805)
Q Consensus 129 ~~~~~~D~G~Y~C~a~n~~g------~--~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (805)
.+++.+|+|.|.|.+.+..| . . ...+.|.|....
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~------------------------------------- 127 (228)
T 3bae_H 85 TSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK------------------------------------- 127 (228)
T ss_dssp CSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC-------------------------------------
T ss_pred cCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC-------------------------------------
Confidence 99999999999999998653 1 1 123566665311
Q ss_pred CCCCceecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEc---CeEEEEEcCCCCcccEE
Q psy2166 200 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAF---GMVVLEILGTKIEDTGV 275 (805)
Q Consensus 200 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~ 275 (805)
..+|.+....+.. .+.+|+.++|.|.+.. ..|.+ .+.|+++|..+...........+ ....|.|.+...+| |.
T Consensus 128 ~~~P~i~~~~~~~-~~~~g~~~~l~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~ 204 (228)
T 3bae_H 128 TTAPSVYPLAPVC-GDTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ES 204 (228)
T ss_dssp CBCCEEEEECC------CCSEEEEEEEEEE-EBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SC
T ss_pred CCCCEEEEecccc-cccCCCCEEEEEEEcc-EeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-Cc
Confidence 1234444332222 2568999999999842 33666 99999998754211111111111 13568999888866 99
Q ss_pred EEEEEEcCCeeEEEEEE
Q psy2166 276 YTCRATNKWGQAEISVN 292 (805)
Q Consensus 276 Y~C~~~n~~g~~~~~~~ 292 (805)
|+|.|.|..+.......
T Consensus 205 YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 205 ITCNVAHPASSTKVDKK 221 (228)
T ss_dssp CEEEEEEGGGTEEEEEE
T ss_pred EEEEEEECCCCCCEEEE
Confidence 99999998887655443
No 336
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.66 E-value=6.8e-16 Score=129.15 Aligned_cols=94 Identities=26% Similarity=0.387 Sum_probs=88.0
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.+.|+|+|..+..+.++.+..+++...|.|.++..+|+|.|+|.|
T Consensus 5 ~~P~i~~~~~~~-~v~~G~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 81 (99)
T 3puc_A 5 SKPVIVTGLQDT-TVSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTV 81 (99)
T ss_dssp EEEEEEECCCCE-EEESSSCEEEEEEEE--EESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEecCccE-EEeCCCcEEEEEEEE--ecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEE
Confidence 578899888888 999999999999998 89999999999999999999999888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEE
Q psy2166 770 TNKWGQAEISVNLECVV 786 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~ 786 (805)
.|..|....++.|.|..
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 82 KNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCcEeEEEEEEEEe
Confidence 99999999999999863
No 337
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.66 E-value=4.4e-16 Score=129.79 Aligned_cols=94 Identities=23% Similarity=0.403 Sum_probs=81.9
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCC--CceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
.||+|...+.+. .+.+|+.++|.|.+. |.|.|.++|+|||+.|... .++.+...++.+.|.|.+++.+|+|.|+|
T Consensus 4 ~PP~i~~~p~~~-~v~~G~~~~l~C~~~--g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 3knb_A 4 IPPKIEALPSDI-SIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEEECCCCSEE-EEETTSEEEEEEEEE--EESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCcE-EEeCCCeEEEEEEEE--EecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEE
Confidence 567777666554 489999999999999 6788999999999999754 36777777888899999999999999999
Q ss_pred EEEcCCcceEEEEEEEEee
Q psy2166 572 RATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~ 590 (805)
.|.|..|..+.++.|.|..
T Consensus 81 ~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 81 SLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEECCCEEEEEEEEEEEE
Confidence 9999999999999998864
No 338
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.66 E-value=6.5e-15 Score=144.00 Aligned_cols=173 Identities=13% Similarity=0.208 Sum_probs=116.3
Q ss_pred ccCCCeEEEEEEEeecCCC--CcEEEEEECC--E---Ecc--------------CCCceEEEEe--CcEEEEEEcccCcC
Q psy2166 316 LKDGDSAHFECTLTPVNDP--ELKVEWFHNG--K---PIF--------------HKNRVKMVSD--FGFVVMDIAYVQSH 372 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p--~~~v~W~~~g--~---~l~--------------~~~~~~~~~~--~~~~~l~i~~v~~~ 372 (805)
+.+|+.++|.|.+. +.+ .+.+.|+|.. . .+. ...++.+..+ .+...|.|.+++.+
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 12 VQPGKSLRLSCAAS--GFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp ECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EcCCCcEEEEEEec--CcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 88999999999997 444 4789999842 1 110 1346776654 24678999999999
Q ss_pred CceEEEEEEEeCce----e--eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecce
Q psy2166 373 DSGEYVCRAWNKYG----E--DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDV 446 (805)
Q Consensus 373 d~G~Y~C~a~n~~g----~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (805)
|+|.|.|.+.+..| . ....+.|.|...
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~----------------------------------------------- 122 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSG----------------------------------------------- 122 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEECSS-----------------------------------------------
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEccC-----------------------------------------------
Confidence 99999999998653 1 112245555311
Q ss_pred eeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC
Q psy2166 447 TQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP 526 (805)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p 526 (805)
...+|.+....+... +.+|+.++|.|.+.+ ..|
T Consensus 123 ---------------------------------------------~~~~P~i~~~~~~~~-~~~g~~v~L~C~~~g-~~P 155 (223)
T 1dee_B 123 ---------------------------------------------SASAPTLFPLVSCEN-SNPSSTVAVGCLAQD-FLP 155 (223)
T ss_dssp ---------------------------------------------CCBCCEEEEEECTTC-CCSSSEEEEEEEEEE-EBS
T ss_pred ---------------------------------------------CCCCCEEEEecCCcc-cCCCCcEEEEEEEEE-EeC
Confidence 123455554322222 679999999999995 336
Q ss_pred Cc-EEEEEE-CCEEccCCCceE-EEeeCC---EEEEEEccCCC--CCCEEEEEEEEcCCcceEEEE
Q psy2166 527 DL-VVEWFY-NGKKLPHGHRYR-TFHDFG---IVILDILYCYE--ENSGVYECRATNKYGSDVTKA 584 (805)
Q Consensus 527 ~~-~v~W~~-~g~~l~~~~~~~-~~~~~~---~~~L~i~~v~~--~d~G~Y~C~a~n~~g~~~~~~ 584 (805)
.+ .++|++ ||..+....... ...++. .+.|.|..... +|.|.|+|.|.|..|......
T Consensus 156 ~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 156 DSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp SCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred CCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 55 999999 998875410000 001111 23588887776 789999999999998876544
No 339
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.65 E-value=3.1e-15 Score=149.84 Aligned_cols=193 Identities=13% Similarity=0.138 Sum_probs=117.7
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EE---c----------cCCCceEEE--EeCcEEEEEEcccCcCCceEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KP---I----------FHKNRVKMV--SDFGFVVMDIAYVQSHDSGEYV 378 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~---l----------~~~~~~~~~--~~~~~~~l~i~~v~~~d~G~Y~ 378 (805)
+.+|+.++|.|.+. +.|.+.+.|+|.. .. + ....++.+. ......+|.|.++..+|+|.|.
T Consensus 15 v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~ 92 (256)
T 3tf7_C 15 VSEGASLQLRCKYS--YSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYF 92 (256)
T ss_dssp EETTSCEEECCEEE--CSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEE
T ss_pred ecCCCeEEEEEEeC--CCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEE
Confidence 88999999999998 6789999999832 11 1 112344443 2245678999999999999999
Q ss_pred EEEEeCcee----eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCce
Q psy2166 379 CRAWNKYGE----DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQS 454 (805)
Q Consensus 379 C~a~n~~g~----~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (805)
|.+.|..+. ....+.|.|........ ..+
T Consensus 93 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~--~~~--------------------------------------------- 125 (256)
T 3tf7_C 93 CAVSAKGTGSKLSFGKGAKLTVSPGGGGSG--GGG--------------------------------------------- 125 (256)
T ss_dssp EEEECTTCTTCEEECCCEEEEEEC--------------------------------------------------------
T ss_pred EEEecCCCccceEECCCeEEEEeCCCCCcC--CCC---------------------------------------------
Confidence 999987542 11234555542100000 000
Q ss_pred EEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEE
Q psy2166 455 AHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFY 534 (805)
Q Consensus 455 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~ 534 (805)
...........+|.+...+... .+.+|++++|.|.+. +. .+.+.|+|
T Consensus 126 -----------------------------~~~~~~~~~~~~~~v~~~p~~~-~v~~G~~v~L~C~~~--~~-~~~v~W~k 172 (256)
T 3tf7_C 126 -----------------------------SGGGGSGGGGSEAAVTQSPRNK-VTVTGENVTLSCRQT--NS-HNYMYWYR 172 (256)
T ss_dssp -----------------------------------------CCEEESCSEE-EEETTCCEEECEEEC--SC-CSEEEEEE
T ss_pred -----------------------------cCcccCCCCcCccEEEecCCEE-EEeCCCcEEEEEEcC--CC-ceEEEEEE
Confidence 0000000012345555544443 378999999999998 44 56999998
Q ss_pred CC--EE---cc------------CCCceEEEe-eCCEEEEEEccCCCCCCEEEEEEEEcCCcceEE--EEEEEEee
Q psy2166 535 NG--KK---LP------------HGHRYRTFH-DFGIVILDILYCYEENSGVYECRATNKYGSDVT--KASLKCVS 590 (805)
Q Consensus 535 ~g--~~---l~------------~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~ 590 (805)
++ .. +. ...++.+.. ......|.|.+++.+|+|.|+|.|.|..|.... -..|.|..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 173 QDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp ECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEEEc
Confidence 32 11 10 123343332 234557999999999999999999998775432 24455554
No 340
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.65 E-value=2.8e-16 Score=147.46 Aligned_cols=154 Identities=16% Similarity=0.294 Sum_probs=107.7
Q ss_pred cccCCCeEEEEEEEeecCCCCcEEEEEEC-CEEcc------------CC--CceEEEEeCcEEEEEEcccCcCCceEEEE
Q psy2166 315 GLKDGDSAHFECTLTPVNDPELKVEWFHN-GKPIF------------HK--NRVKMVSDFGFVVMDIAYVQSHDSGEYVC 379 (805)
Q Consensus 315 ~~~~g~~~~l~C~~~~~~~p~~~v~W~~~-g~~l~------------~~--~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 379 (805)
.+.+|++++|.|.+.+ ..+.+.|.|+|+ +..+. .. .++.+ +.....|.|.+++.+|+|.|+|
T Consensus 10 ~v~~G~~vtL~c~~~~-~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 10 NAITGSNVTLTILKHP-LASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp EEETTSCEEECCCSSC-CCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEEEE
T ss_pred EEEeCCCEEEeCCCCC-CCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEEEE
Confidence 3789999999998742 344789999994 33221 11 34444 1223369999999999999999
Q ss_pred EEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEE
Q psy2166 380 RAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEA 459 (805)
Q Consensus 380 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (805)
.+.+.. .....+.|.|..+
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~------------------------------------------------------------ 105 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEM------------------------------------------------------------ 105 (180)
T ss_dssp EEESSS-EEEEEEEEEEECC------------------------------------------------------------
T ss_pred EEEcCC-eEEEEEEEEEECC------------------------------------------------------------
Confidence 998776 5566677777532
Q ss_pred EEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEc
Q psy2166 460 RLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKL 539 (805)
Q Consensus 460 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l 539 (805)
...|.+.. .++.++|.|.+.. | |.|.|+|+++|..+
T Consensus 106 ---------------------------------~~~P~i~~---------~~~~v~L~C~~~~-g-p~p~i~W~~~~~~l 141 (180)
T 2dru_A 106 ---------------------------------VSKPMIYW---------ECSNATLTCEVLE-G-TDVELKLYQGKEHL 141 (180)
T ss_dssp ---------------------------------CCCCEEEE---------EGGGTEEEEECSS-C-TTCEEEEEETTEEE
T ss_pred ---------------------------------CCCCEEEe---------cCCCEEEEEEeCC-C-CCCEEEEEECCeEC
Confidence 12344432 2356999999942 5 88999999999988
Q ss_pred cCCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEE
Q psy2166 540 PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 587 (805)
Q Consensus 540 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 587 (805)
.. ..+ ..|.+.. .+|+|.|+|.|.|..|.......+.
T Consensus 142 ~~-------~~~--~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i~ 178 (180)
T 2dru_A 142 RS-------LRQ--KTMSYQW--TNLRAPFKCKAVNRVSQESEMEVVN 178 (180)
T ss_dssp EE-------ESS--SEEEEEC--SCCSSCEEEEEEETTEEEEEEECCC
T ss_pred cC-------CCC--CEEEEEE--hhcCccEEEEEecCcCccccceeEe
Confidence 51 111 2355532 7899999999999999887766554
No 341
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.65 E-value=8.1e-16 Score=153.11 Aligned_cols=174 Identities=14% Similarity=0.098 Sum_probs=115.2
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEE--------------CCEecCC----CCceEEEec-CcEEEEEEccccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF--------------NGKPLEL----GSRFKTTAD-FGFVTLDLTEVYD 133 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k--------------~g~~i~~----~~~~~~~~~-~~~~~L~I~~~~~ 133 (805)
+..+.+.+|+.++|.| .. +.+.+.|.|+| ++..+.. ..|+.+..+ .+.++|.|.+++.
T Consensus 9 p~~v~v~~G~~v~L~C-~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~ 85 (245)
T 4ei6_B 9 PSHQIIDMGQMVTLNC-DP--VSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTAL 85 (245)
T ss_dssp CSEEEEETTCCEEEEE-EC--CTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCG
T ss_pred CceEEecCCCCEEEEE-Ec--CCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCH
Confidence 3367899999999999 44 57888999998 3322221 167777664 4567999999999
Q ss_pred CCCeEEEEEEEeC----CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceeccc
Q psy2166 134 RDQGIYTCRAWNL----AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEF 209 (805)
Q Consensus 134 ~D~G~Y~C~a~n~----~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 209 (805)
+|+|.|+|.+.+. .+.......|.|...... ..+|.+....
T Consensus 86 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~-----------------------------------~~~p~~~~~~ 130 (245)
T 4ei6_B 86 EDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKN-----------------------------------VFPPEVAVFE 130 (245)
T ss_dssp GGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGG-----------------------------------CBCCEEEEEC
T ss_pred hHCEEEEEEEccCCCcceEEEcCCcEEEEecccCC-----------------------------------CCCceEEEeC
Confidence 9999999999853 222333455666531100 0234443332
Q ss_pred ccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEE-------EcC----eEEEEEcCCCCcc-cEEE
Q psy2166 210 QHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVH-------AFG----MVVLEILGTKIED-TGVY 276 (805)
Q Consensus 210 ~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~~-------~~~----~~~L~i~~~~~~d-~G~Y 276 (805)
.....+.+|+.++|.|.+.. ..|. ..+.|+++|..+.......... .++ ...|.|.....+| +|.|
T Consensus 131 ~~~~~~~~g~~v~l~C~~~g-~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~y 209 (245)
T 4ei6_B 131 PSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 209 (245)
T ss_dssp CCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEE
T ss_pred CCcccccCCCceEEEEEEee-EeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeE
Confidence 22223567999999999843 2444 4999999999987543211100 122 2458888888888 9999
Q ss_pred EEEEEcCCe
Q psy2166 277 TCRATNKWG 285 (805)
Q Consensus 277 ~C~~~n~~g 285 (805)
+|.|.|...
T Consensus 210 tC~v~~~~l 218 (245)
T 4ei6_B 210 RCQVQFYGL 218 (245)
T ss_dssp EEEEEECCB
T ss_pred EEEEEECCC
Confidence 999998654
No 342
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.65 E-value=6e-16 Score=127.61 Aligned_cols=90 Identities=14% Similarity=0.225 Sum_probs=78.9
Q ss_pred CCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECC--EEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 691 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--KPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 691 ~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g--~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|+|+|+| ..+.... .+....+...|.|.++..+|+|.|+|.
T Consensus 2 ~P~i~~~~~~~-~v~~G~~~~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASRKI-KIKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEECCCCCEE-EECTTBCCEEEEEEE--CCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCeEEcCCCce-EEeCCCEEEEEEEEE--EcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEE
Confidence 68887777777 999999999999999 9999999999999 8886653 334456667899999999999999999
Q ss_pred EEcCCccEEEEEEEEEE
Q psy2166 769 ATNKWGQAEISVNLECV 785 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~ 785 (805)
|.|..|..+.++.|.|+
T Consensus 77 a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEC
Confidence 99999999999998874
No 343
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.65 E-value=2.3e-15 Score=148.09 Aligned_cols=82 Identities=15% Similarity=0.166 Sum_probs=54.7
Q ss_pred ccCCC-CeEEEEEEEeecCC-CCe-EEEEEE-CCEEccCCCCeEEEeeCc----EEEEEEcCCCC--CCCEEEEEEEEcC
Q psy2166 703 NLSEG-EIAHFEASLIPVGD-QTM-TVEFLY-NGKPIEASHRIRTVHAFG----MVVLEILGTKI--EDTGVYTCRATNK 772 (805)
Q Consensus 703 ~v~~G-~~~~l~C~~~~~g~-p~~-~v~W~~-~g~~l~~~~~~~~~~~~~----~~~L~i~~v~~--~d~G~Y~C~a~N~ 772 (805)
.+..| +.++|.|.+. |. |.+ .|+|++ ||+.+...........++ ...|.|..+.. +|.|.|+|.|.|.
T Consensus 136 ~~~~g~~~v~L~C~~~--g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~ 213 (232)
T 1dn0_B 136 NSPSDTSSVAVGCLAQ--DFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHP 213 (232)
T ss_dssp -----CCSEEEEEEEE--EEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECT
T ss_pred ccCCCCCcEEEEEEEE--EEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeC
Confidence 35578 9999999998 54 776 999999 998875410000000112 23689998887 8999999999999
Q ss_pred CccEEEEEEEEEEE
Q psy2166 773 WGQAEISVNLECVV 786 (805)
Q Consensus 773 ~G~~~~~~~l~V~~ 786 (805)
.|.......+.|..
T Consensus 214 ~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 214 NGNKEKNVPLPVIA 227 (232)
T ss_dssp TCCEEEEEECCC--
T ss_pred CCCcceeEecCCCC
Confidence 99887777776654
No 344
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.65 E-value=1.3e-15 Score=153.77 Aligned_cols=176 Identities=13% Similarity=0.072 Sum_probs=115.7
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEE--CCEec------------CCC----CceEEEec-CcEEEEEEcccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIF--NGKPL------------ELG----SRFKTTAD-FGFVTLDLTEVY 132 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k--~g~~i------------~~~----~~~~~~~~-~~~~~L~I~~~~ 132 (805)
.+..+.+.+|++++|.|.+. .+.+.|.|+| ++..+ ... +|+.+..+ ++..+|.|.+++
T Consensus 32 ~p~~v~v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 108 (268)
T 3pl6_D 32 TPSNKVTEKGKYVELRCDPI---SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTE 108 (268)
T ss_dssp CCSEEEEETTCCEEEEEBCB---TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCC
T ss_pred CCCEEEecCCCCEEEEEEeC---CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCC
Confidence 34467899999999999986 5678999999 22211 111 67777653 346789999999
Q ss_pred cCCCeEEEEEEEeC--CeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 133 DRDQGIYTCRAWNL--AGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
.+|+|.|+|.+.+. .+.......|.|...... ..+|.+.....
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~-----------------------------------~~~P~v~~~~~ 153 (268)
T 3pl6_D 109 RGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKN-----------------------------------VFPPEVAVFEP 153 (268)
T ss_dssp GGGCEEEEEEEESSSSSCEECCCEEEEEESCGGG-----------------------------------CBCCEEEEECC
T ss_pred cccCEEEEEEEecCCCceeeCCcEEEEEecCccc-----------------------------------ccCCceEEeCC
Confidence 99999999999974 233333455666542110 12354443322
Q ss_pred cccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEE-------EEcC----eEEEEEcCCCCcc-cEEEE
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTV-------HAFG----MVVLEILGTKIED-TGVYT 277 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~-------~~~~----~~~L~i~~~~~~d-~G~Y~ 277 (805)
....+.+|+.++|.|.+.. ..|. ..+.|+|+|..+......... ..++ ...|.|.....+| +|.|+
T Consensus 154 ~~~~~~~g~~v~L~C~~~g-~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~Yt 232 (268)
T 3pl6_D 154 SEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFR 232 (268)
T ss_dssp CHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEE
T ss_pred CcccccCCCceEEEEEECc-ccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEE
Confidence 2223567999999999853 2343 399999999988653211100 0111 2467888777777 99999
Q ss_pred EEEEcCCee
Q psy2166 278 CRATNKWGQ 286 (805)
Q Consensus 278 C~~~n~~g~ 286 (805)
|.|.|....
T Consensus 233 C~v~~~~l~ 241 (268)
T 3pl6_D 233 CQVQFYGLS 241 (268)
T ss_dssp EEEEECCBC
T ss_pred EEEEcCCCC
Confidence 999987543
No 345
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.65 E-value=8.7e-16 Score=150.50 Aligned_cols=169 Identities=14% Similarity=0.155 Sum_probs=114.0
Q ss_pred ccCCCeEEEEEEEeecCCC--CcEEEEEECC--EEc-----------------cCCCceEEEEe--CcEEEEEEcccCcC
Q psy2166 316 LKDGDSAHFECTLTPVNDP--ELKVEWFHNG--KPI-----------------FHKNRVKMVSD--FGFVVMDIAYVQSH 372 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p--~~~v~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~l~i~~v~~~ 372 (805)
+.+|++++|.|.+. +.+ .+.+.|+|+. ..+ ....++.+..+ .+...|.|.+++.+
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (225)
T 1op3_H 12 VKAGGSLILSCGVS--NFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE 89 (225)
T ss_dssp EETTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred ecCCCCEEEEEEec--CcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 78999999999997 555 6789999852 211 01346666654 35678999999999
Q ss_pred CceEEEEEEEeCce-----e---eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeec
Q psy2166 373 DSGEYVCRAWNKYG-----E---DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQIS 444 (805)
Q Consensus 373 d~G~Y~C~a~n~~g-----~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (805)
|+|.|.|.+.|..| . ....+.|.|...+
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------------- 125 (225)
T 1op3_H 90 DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAS-------------------------------------------- 125 (225)
T ss_dssp GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCS--------------------------------------------
T ss_pred hCEEEEEEEecCCCccccccceeecCCEEEecccCC--------------------------------------------
Confidence 99999999998764 1 1123456654210
Q ss_pred ceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCC
Q psy2166 445 DVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVT 524 (805)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g 524 (805)
..+|.+....+... +.+|+.++|.|.+.+ .
T Consensus 126 ------------------------------------------------~~~P~v~~~~~~~~-~~~g~~v~L~C~~~g-~ 155 (225)
T 1op3_H 126 ------------------------------------------------TKGPSVFPLAPSSK-STSGGTAALGCLVKD-Y 155 (225)
T ss_dssp ------------------------------------------------CBCCEEEEECCCTT-CCCCCEEEEEEEEEE-E
T ss_pred ------------------------------------------------CcCCeEEEeccccc-ccCCCcEEEEEEEEe-E
Confidence 23455544333322 678999999999995 2
Q ss_pred CCCc-EEEEEECCEEccCC-CceEEEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcceE
Q psy2166 525 DPDL-VVEWFYNGKKLPHG-HRYRTFHDFG---IVILDILYCYEENSGVYECRATNKYGSDV 581 (805)
Q Consensus 525 ~p~~-~v~W~~~g~~l~~~-~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 581 (805)
.|.+ .|+|+++|..+... .......++. .+.|.|..+..+| |.|+|.|.|..+...
T Consensus 156 ~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 156 FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp BSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred ECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 3655 99999999764211 0001111121 2359999988888 999999999776544
No 346
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.64 E-value=4.4e-17 Score=160.96 Aligned_cols=167 Identities=18% Similarity=0.235 Sum_probs=95.8
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EEc------------cCCCceEEEEeCcEEEEEEcccCcCCceEEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KPI------------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 381 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~l------------~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 381 (805)
+.+|++++|.|.+. +.+.+.+.|+|++ ..+ ....++.+...++...|.|.+++.+|+|.|.|.+
T Consensus 35 v~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 112 (233)
T 3bqu_C 35 MSIGEKVTIRCITS--TDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQ 112 (233)
T ss_dssp ------CCEEEEEE--EEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEE
T ss_pred EecCCCEEEEEecC--CcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEE
Confidence 88999999999997 5566789999853 211 0123444444445568999999999999999999
Q ss_pred EeCceeeEE-EEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEE
Q psy2166 382 WNKYGEDFT-RATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 460 (805)
Q Consensus 382 ~n~~g~~~~-~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (805)
.|..+.... ...|.|..
T Consensus 113 ~~~~~~~~~~~~~l~V~~-------------------------------------------------------------- 130 (233)
T 3bqu_C 113 SDNLPYTFGGGTNLEIKR-------------------------------------------------------------- 130 (233)
T ss_dssp CSSSSCCBCCCCBC---C--------------------------------------------------------------
T ss_pred ecCCceeecCCEEEEEeC--------------------------------------------------------------
Confidence 886542211 12233211
Q ss_pred EeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEEEECCEEc
Q psy2166 461 LTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEWFYNGKKL 539 (805)
Q Consensus 461 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W~~~g~~l 539 (805)
...+|.+....+... +.+|+.++|.|.+.+. .|. +.|+|+|||..+
T Consensus 131 -------------------------------~~~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~-~p~~~~v~W~k~g~~~ 177 (233)
T 3bqu_C 131 -------------------------------ADAAPTVSIFPPSSE-QLTSGGASVVCFLNNF-YPKDINVKWKIDGSER 177 (233)
T ss_dssp -------------------------------CCBCCEEEEECCCHH-HHHTTEEEEEEEEEEE-BSSCEEEEEEEC----
T ss_pred -------------------------------CCCCCEEEEeCCCHH-hhcCCceEEEEEEccc-cCCceEEEEEECCeeC
Confidence 123677766554443 4479999999999963 344 489999999988
Q ss_pred cCCCceE--EE--eeC---CEEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 540 PHGHRYR--TF--HDF---GIVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 540 ~~~~~~~--~~--~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
..+.... .. .++ ..+.|.|..+..+|+|.|+|.|.|....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 178 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp -CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred CCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 6541111 01 111 1346899998889999999999997544
No 347
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.64 E-value=6.7e-16 Score=131.30 Aligned_cols=95 Identities=23% Similarity=0.304 Sum_probs=87.9
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. |.|.+.|.|+|+|..+..+.++.+..+++...|.|.+++.+|+|.|+|.|
T Consensus 12 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 12 SPPCFLRFPRPV-RVVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeeEcCCccE-EEeCCCeEEEEEEEe--ecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEE
Confidence 689999988888 999999999999998 89999999999999999888988888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEe
Q psy2166 770 TNKWGQAEISVNLECVVW 787 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~ 787 (805)
.|..|....++.|.|...
T Consensus 89 ~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 89 RNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EETTEEEEEEEEEEEEC-
T ss_pred EcCCCcEEEEEEEEEEcC
Confidence 999999999999998753
No 348
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=9.1e-16 Score=132.19 Aligned_cols=101 Identities=22% Similarity=0.270 Sum_probs=88.3
Q ss_pred CCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccC-CCCeEEEeeC-cEEEEEEcCCCCCCCEEE
Q psy2166 688 DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA-SHRIRTVHAF-GMVVLEILGTKIEDTGVY 765 (805)
Q Consensus 688 ~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~-~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y 765 (805)
...+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+.. ..++.+..++ +..+|.|.++..+|+|.|
T Consensus 12 ~~~~p~f~~~p~~~-~v~~G~~v~L~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (116)
T 2kkq_A 12 HKRAPMFIYKPQSK-KVLEGDSVKLECQIS--AIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWY 88 (116)
T ss_dssp CCBCCCBSSCCCCE-EEETTEEEEEEEEBC--CBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEE
T ss_pred CCCCCeEEeCCCcE-EEeCCCcEEEEEEEe--ccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEE
Confidence 34689999999998 999999999999998 999999999999999885 5677765544 566899999999999999
Q ss_pred EEEEEcCCccEEEEEEEEEEEeCCCc
Q psy2166 766 TCRATNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 766 ~C~a~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
+|.|.|..|....++.|.|...|..+
T Consensus 89 ~C~a~N~~G~~~~~~~l~V~~~p~~~ 114 (116)
T 2kkq_A 89 TVSAVNEAGVTTCNTRLDVTARPNQT 114 (116)
T ss_dssp EEEEEETTEEEEEEEEEEEECCSCCC
T ss_pred EEEEEcCCCeEEEEEEEEEeCCCCCC
Confidence 99999999999999999998765543
No 349
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=3.6e-15 Score=147.91 Aligned_cols=186 Identities=13% Similarity=0.115 Sum_probs=117.3
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c-----------C---CCCceEEEecC--cEEEEEEcc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L-----------E---LGSRFKTTADF--GFVTLDLTE 130 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i-----------~---~~~~~~~~~~~--~~~~L~I~~ 130 (805)
.+..+.+.+|+.++|.|.+.+...+.+.|.|+|+. .. + . ..+|+.+..+. +..+|.|.+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (242)
T 1hxm_B 7 PQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHN 86 (242)
T ss_dssp CCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECS
T ss_pred CCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECC
Confidence 34467899999999999998421266799999842 21 1 0 34677776543 577999999
Q ss_pred cccCCCeEEEEEEEeCCe-----e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCC
Q psy2166 131 VYDRDQGIYTCRAWNLAG-----E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPP 203 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g-----~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 203 (805)
++.+|+|.|.|.+.+... . ......|.|..++... ..+|
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~----------------------------------~~~p 132 (242)
T 1hxm_B 87 VEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDA----------------------------------DVSP 132 (242)
T ss_dssp CCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCS----------------------------------CCSC
T ss_pred CCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCC----------------------------------CcCC
Confidence 999999999999987521 1 1123567775432100 0112
Q ss_pred ceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCE-EccCCCcEEEEEEcC----eEEEEEcCCCCcccEEEE
Q psy2166 204 QFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGK-PIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYT 277 (805)
Q Consensus 204 ~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~-~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~ 277 (805)
......+....+.+|+.++|.|.+.. ..|. +.+.|+++|. .+...........++ .+.|.|.+... | |.|+
T Consensus 133 ~~~v~~p~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~ 209 (242)
T 1hxm_B 133 KPTIFLPSIAETKLQKAGTYLCLLEK-FFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHR 209 (242)
T ss_dssp BCCCCCCCGGGGGSSSCEEEEEEEEE-ESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEE
T ss_pred CceEECCChhhcccCCCceEEEEEee-EECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEE
Confidence 21111111223668999999999852 3354 8999999987 564321000111122 24788877664 5 9999
Q ss_pred EEEEcCCeeEEEEEEEE
Q psy2166 278 CRATNKWGQAEISVNLE 294 (805)
Q Consensus 278 C~~~n~~g~~~~~~~l~ 294 (805)
|.|.|..+.......+.
T Consensus 210 C~v~n~~~~~~~~~~~~ 226 (242)
T 1hxm_B 210 CIVRHENNKNGVDQEII 226 (242)
T ss_dssp EEEEETTSGGGSCEEEE
T ss_pred EEEEeCCCCCCceeEee
Confidence 99999887654444443
No 350
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.64 E-value=1.3e-15 Score=124.75 Aligned_cols=88 Identities=20% Similarity=0.263 Sum_probs=80.2
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. + |++.|+|+|||+++..+.++.+..+++...|.|.++..+|+|.|+|.|
T Consensus 4 ~~~~~~~~~~~~-~v~~G~~v~l~C~v~--~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 4 ALIEVEKPLYGV-EVFVGETAHFEIELS--E-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCEEECCCCE-EEETTSCEEEEEEES--S-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcEeeccCcce-EEeCCCCEEEEEEEC--C-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEE
Confidence 689999999999 999999999999997 6 457899999999999999999988888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEE
Q psy2166 770 TNKWGQAEISVNLECV 785 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~ 785 (805)
.| ...+++|+|+
T Consensus 80 ~n----~~~sa~L~V~ 91 (93)
T 1waa_A 80 AN----TKSAANLKVK 91 (93)
T ss_dssp TT----EEEEEEEEEE
T ss_pred CC----CcEEEEEEEE
Confidence 88 4578888886
No 351
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.64 E-value=9.5e-16 Score=150.51 Aligned_cols=203 Identities=15% Similarity=0.150 Sum_probs=111.3
Q ss_pred EEEEEEEEcCCeeEEEEEEEEEeccCCCCCCeEEecCCCccc-ccCCCeEEEEEEEeecCC--C-CcEEEEEECCEEccC
Q psy2166 274 GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEG-LKDGDSAHFECTLTPVND--P-ELKVEWFHNGKPIFH 349 (805)
Q Consensus 274 G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~~~~~--p-~~~v~W~~~g~~l~~ 349 (805)
|.|.|.+.+..+. ......+ .+|.+...+..... +..|+.++|.|.+.+ .. | ...|+|++||..+..
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~------~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g-~~p~P~~i~v~W~k~g~~l~~ 71 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELL------GGPSVFLFPPKPKDTLMISRTPEVTCVVVD-VSHEDPEVKFNWYVDGVEVHN 71 (240)
T ss_dssp ------------------------------CEEEEECCCHHHHHSSSSCCEEEEEEES-CCC--CCCEEEEEETTEEECC
T ss_pred CceeeeeeecCCC--CCccccC------CCCEEEEECcChHHhcccCCCcEEEEEEec-cccCCCccEEEEEECCcccCC
Confidence 7899999986553 2211111 34444444444333 557999999999984 23 3 458999999998753
Q ss_pred CCce--EEEEeC---cEEEEEEcccCcCCceEEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCC
Q psy2166 350 KNRV--KMVSDF---GFVVMDIAYVQSHDSGEYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQ 424 (805)
Q Consensus 350 ~~~~--~~~~~~---~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 424 (805)
.... ....++ ....|.|.....+|.|.|+|.|.|..+.......+..
T Consensus 72 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~---------------------------- 123 (240)
T 4acp_A 72 AKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK---------------------------- 123 (240)
T ss_dssp CEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECC----------------------------
T ss_pred ceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccc----------------------------
Confidence 2110 011111 1135888877788899999999998764322222211
Q ss_pred CCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCC
Q psy2166 425 QPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISD 504 (805)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ 504 (805)
......+|.+.+..+.
T Consensus 124 ----------------------------------------------------------------~~~~~~~P~V~v~~~~ 139 (240)
T 4acp_A 124 ----------------------------------------------------------------AKGQPREPQVYTLPPS 139 (240)
T ss_dssp ----------------------------------------------------------------CCSCCBCCEEEEECCC
T ss_pred ----------------------------------------------------------------cCCCCCCCEEEEECCC
Confidence 0112467888776655
Q ss_pred cccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc--eEEEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCc
Q psy2166 505 VTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR--YRTFHDFG---IVILDILYCYEENSGVYECRATNKYG 578 (805)
Q Consensus 505 ~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~--~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g 578 (805)
.. ..+|+.++|.|.+.++..+...++|+|||+.+..... .....++. .+.|.|......|.|.|+|.|.|..-
T Consensus 140 ~~-~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 140 RD-ELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp GG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred hH-HhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 44 3359999999999964333459999999998753211 11111222 23577776555688999999998753
No 352
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.63 E-value=9.5e-16 Score=150.69 Aligned_cols=184 Identities=9% Similarity=0.024 Sum_probs=117.0
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCC--ceEEEEECCEec-CCCCceEEE-ecC---cEEEEEEcccccCCC
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPN--LKIEWIFNGKPL-ELGSRFKTT-ADF---GFVTLDLTEVYDRDQ 136 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~--~~v~W~k~g~~i-~~~~~~~~~-~~~---~~~~L~I~~~~~~D~ 136 (805)
.+|.+.+..+....+.+|+.++|.|.+.+. .|. ..|+|++||..+ ......... .++ ...+|.|.+++.+|+
T Consensus 11 ~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~-~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~ 89 (231)
T 2w59_A 11 SPIQLYAIPPSPGELYISLDAKLRCLVVNL-PSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSG 89 (231)
T ss_dssp -CCEEEEECCCHHHHHTSCCCEEEEEEEEE-SCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCCEEEEeCcChhhcccCCceEEEEEEeCc-cCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCC
Confidence 356555445556778899999999999842 453 499999999887 332222211 222 134799999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 137 GIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 137 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
|.|+|.|.|..+... ..+.|..... ...+|.+....+....+
T Consensus 90 g~Y~C~~~~~~~~~~--~~~~v~~~~~-----------------------------------~~~~P~v~v~~~~~~~~- 131 (231)
T 2w59_A 90 ERFTCTVQHEELPLP--LSKSVYRNTG-----------------------------------PTTPPLIYPFAPHPEEL- 131 (231)
T ss_dssp CCEEEEEECTTCSSC--EEEEECCCCS-----------------------------------CCBCCEEEEECCCGGGG-
T ss_pred CEEEEEEEcCCCCCc--eEEEEecCCC-----------------------------------CCcCCEEEEeCCCHHHh-
Confidence 999999999865432 2333322100 01234444332222123
Q ss_pred CCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEE---EEE--------Ec-C----eEEEEEcCCCCcccEEEEEEE
Q psy2166 217 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR---TVH--------AF-G----MVVLEILGTKIEDTGVYTCRA 280 (805)
Q Consensus 217 ~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~---~~~--------~~-~----~~~L~i~~~~~~d~G~Y~C~~ 280 (805)
.+..++|.|.+.....+.+.|.|+|+|..+....... ... .+ + .+.|.|.....+|.|.|+|.|
T Consensus 132 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v 211 (231)
T 2w59_A 132 SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMA 211 (231)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEE
T ss_pred ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEE
Confidence 3557999999853222358999999999987553111 111 22 2 256888888888899999999
Q ss_pred EcCCee
Q psy2166 281 TNKWGQ 286 (805)
Q Consensus 281 ~n~~g~ 286 (805)
.|....
T Consensus 212 ~n~~l~ 217 (231)
T 2w59_A 212 VHEALP 217 (231)
T ss_dssp ECTTST
T ss_pred EcCCCC
Confidence 997653
No 353
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=6.4e-16 Score=128.77 Aligned_cols=92 Identities=14% Similarity=0.247 Sum_probs=83.6
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+++.|.|.+ .|.|.|+|+|||+.+..+.++.+..+++...|.|.++..+|+|.|+|.|
T Consensus 6 ~p~~~~~~~~~~-~v~~G~~v~l~C~v----~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 6 SGLKILTPLTDQ-TVNLGKEICLKCEI----SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAP 80 (100)
T ss_dssp CCCCCSBCCCCE-EEETTSCCCEEEEC----SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCEEeccCCce-EEcCCCCEEEEEEe----CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEE
Confidence 578999999999 99999999999997 5888999999999999999999888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeC
Q psy2166 770 TNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~ 788 (805)
.|. ..+.++.|+|...|
T Consensus 81 ~N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 81 DAY--NVTLPAKVHVISGP 97 (100)
T ss_dssp SSS--CCCEEEEEEEECCS
T ss_pred cCC--CeeEEEEEEEeCCC
Confidence 998 67788899987543
No 354
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.63 E-value=1e-15 Score=150.52 Aligned_cols=183 Identities=11% Similarity=0.091 Sum_probs=116.8
Q ss_pred CCeEEecCCCcccccCCCeEEEEEEEeecCCCC--cEEEEEECCEEc-cCCCceEEEEeCc----EEEEEEcccCcCCce
Q psy2166 303 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE--LKVEWFHNGKPI-FHKNRVKMVSDFG----FVVMDIAYVQSHDSG 375 (805)
Q Consensus 303 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~--~~v~W~~~g~~l-~~~~~~~~~~~~~----~~~l~i~~v~~~d~G 375 (805)
+|.+.........+.+|+.++|.|.+.+ ..|. ..|+|+++|+.+ ...........++ ...|.|.++..+|.|
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g-~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g 90 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVN-LPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGE 90 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEE-ESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeC-ccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCC
Confidence 4444433233333779999999999984 3463 499999999877 3322211111111 236999999999999
Q ss_pred EEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceE
Q psy2166 376 EYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA 455 (805)
Q Consensus 376 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (805)
.|+|.|.|..+.. ...+.|....
T Consensus 91 ~Y~C~~~~~~~~~--~~~~~v~~~~------------------------------------------------------- 113 (231)
T 2w59_A 91 RFTCTVQHEELPL--PLSKSVYRNT------------------------------------------------------- 113 (231)
T ss_dssp CEEEEEECTTCSS--CEEEEECCCC-------------------------------------------------------
T ss_pred EEEEEEEcCCCCC--ceEEEEecCC-------------------------------------------------------
Confidence 9999999987642 2233331100
Q ss_pred EEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEEC
Q psy2166 456 HFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYN 535 (805)
Q Consensus 456 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~ 535 (805)
....+|.+.+..+....+. |..++|.|.+.++..+.+.|+|+||
T Consensus 114 -----------------------------------~~~~~P~v~v~~~~~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k~ 157 (231)
T 2w59_A 114 -----------------------------------GPTTPPLIYPFAPHPEELS-LSRVTLSCLVRGFRPRDIEIRWLRD 157 (231)
T ss_dssp -----------------------------------SCCBCCEEEEECCCGGGGG-SSEEEEEEEEEEEBSSCCEEEEEET
T ss_pred -----------------------------------CCCcCCEEEEeCCCHHHhc-cCceEEEEEEEeccCCCcEEEEEEC
Confidence 0124566655443333233 5579999999964234589999999
Q ss_pred CEEccCCCceE---EE---------ee-CC---EEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 536 GKKLPHGHRYR---TF---------HD-FG---IVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 536 g~~l~~~~~~~---~~---------~~-~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
|+.+..+.... .. .+ +. .+.|.|.....+|.|.|+|.|.|....
T Consensus 158 g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 158 HRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp TEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred CEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 99986543111 11 22 22 246888887778899999999998754
No 355
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.63 E-value=1.6e-15 Score=151.45 Aligned_cols=183 Identities=10% Similarity=0.065 Sum_probs=117.9
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECC--E---ec--------------CCCCceEEEec--CcEEEEEEccc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--K---PL--------------ELGSRFKTTAD--FGFVTLDLTEV 131 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~---~i--------------~~~~~~~~~~~--~~~~~L~I~~~ 131 (805)
+..+.+.+|++++|.|.+.+...+...+.|+|.. . .+ ...+|+.+..+ .+.++|+|.++
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (253)
T 3liz_H 7 SGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSL 86 (253)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 3467899999999999998422345689999832 1 11 12357777654 36778999999
Q ss_pred ccCCCeEEEEEEEeCC----eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 132 YDRDQGIYTCRAWNLA----GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~----g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
+.+|+|.|.|.+.+.. +.......|.|.... ..+|.+..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~i~~ 129 (253)
T 3liz_H 87 KSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK-------------------------------------TTPPSVYP 129 (253)
T ss_dssp CGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC-------------------------------------CBCCEEEE
T ss_pred ChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC-------------------------------------CCCCeEEE
Confidence 9999999999998752 222333566664211 13355443
Q ss_pred ccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEc---CeEEEEEcCCCCcccEEEEEEEEcC
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAF---GMVVLEILGTKIEDTGVYTCRATNK 283 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~ 283 (805)
..... .+.+|+.++|.|.+.. ..|.+ .+.|+++|..+...........+ ..+.|.|.....+| |.|+|.|.|.
T Consensus 130 ~~~~~-~~~~g~~v~L~C~~~g-~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~ 206 (253)
T 3liz_H 130 LAPGS-AAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHP 206 (253)
T ss_dssp ECC-------CCEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEG
T ss_pred ecCCc-ccCCCCcEEEEEEEee-EeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEEC
Confidence 22222 3567999999999853 25655 99999998743211000000000 12579999999999 9999999999
Q ss_pred CeeEEEEEEEEE
Q psy2166 284 WGQAEISVNLEC 295 (805)
Q Consensus 284 ~g~~~~~~~l~v 295 (805)
.+.......+.+
T Consensus 207 ~~~~~~~~~~~~ 218 (253)
T 3liz_H 207 ASSTKVDKKIVP 218 (253)
T ss_dssp GGTEEEEEECCC
T ss_pred CCCcceEEEecC
Confidence 887776666654
No 356
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.63 E-value=1.8e-15 Score=148.61 Aligned_cols=173 Identities=16% Similarity=0.217 Sum_probs=113.5
Q ss_pred ccCCCeEEEEEEEeecCCCC----cEEEEEEC--CEEcc----------------CCCceEEEEe--CcEEEEEEcccCc
Q psy2166 316 LKDGDSAHFECTLTPVNDPE----LKVEWFHN--GKPIF----------------HKNRVKMVSD--FGFVVMDIAYVQS 371 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~----~~v~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~l~i~~v~~ 371 (805)
+.+|++++|.|.+. +.+. +.+.|+|+ +..+. ...++.+..+ .+...|.|.+++.
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 12 LKPSQTLSLTCSFS--GFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDT 89 (228)
T ss_dssp ECTTCCEEEEEEEE--SSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCG
T ss_pred ecCCCeEEEEEEEe--CcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCc
Confidence 88999999999997 6654 78999984 22210 1246666553 2457899999999
Q ss_pred CCceEEEEEEEeCce------e--eE-EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeee
Q psy2166 372 HDSGEYVCRAWNKYG------E--DF-TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQ 442 (805)
Q Consensus 372 ~d~G~Y~C~a~n~~g------~--~~-~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (805)
+|+|.|.|.+.|..| . .. ..+.|.|...
T Consensus 90 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~------------------------------------------- 126 (228)
T 3bae_H 90 ADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSA------------------------------------------- 126 (228)
T ss_dssp GGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSC-------------------------------------------
T ss_pred ccCEEEEEEEecCCCccccccceeeeCCcEEEEecCC-------------------------------------------
Confidence 999999999998754 1 11 2255555311
Q ss_pred ecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEee
Q psy2166 443 ISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTP 522 (805)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~ 522 (805)
...+|.+....+... +.+|+.++|.|.+.+
T Consensus 127 -------------------------------------------------~~~~P~i~~~~~~~~-~~~g~~~~l~C~~~g 156 (228)
T 3bae_H 127 -------------------------------------------------KTTAPSVYPLAPVCG-DTTGSSVTLGCLVKG 156 (228)
T ss_dssp -------------------------------------------------CCBCCEEEEECC------CCSEEEEEEEEEE
T ss_pred -------------------------------------------------CCCCCEEEEeccccc-ccCCCCEEEEEEEcc
Confidence 123465554433333 678999999999995
Q ss_pred CCCCCc-EEEEEECCEEccCCCceEEEeeC---CEEEEEEccCCCCCCEEEEEEEEcCCcceEEEEE
Q psy2166 523 VTDPDL-VVEWFYNGKKLPHGHRYRTFHDF---GIVILDILYCYEENSGVYECRATNKYGSDVTKAS 585 (805)
Q Consensus 523 ~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 585 (805)
..|.+ .|+|+++|..+.......+...+ ..+.|.|..+..+| |.|+|.|.|..|.......
T Consensus 157 -~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 157 -YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp -EBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred -EeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 24666 99999998764211111111111 13459999888756 9999999999887665443
No 357
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.63 E-value=1.9e-14 Score=135.96 Aligned_cols=157 Identities=13% Similarity=0.148 Sum_probs=111.3
Q ss_pred cccCCCceEEEEEEEeeCCCCCe--EEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCCeeEEEE
Q psy2166 213 SNLSEGEIAHFEASLIPVGDQTM--TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 290 (805)
Q Consensus 213 ~~v~~g~~~~l~C~~~~~~~p~~--~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 290 (805)
+.+.+|++++|.|.+ +.|.| .|.|++.+..+ .+. ....+...|.|.+++.+|+|.|.|.+.|..+.....
T Consensus 17 v~v~~G~sv~L~C~a---~~p~P~~~i~W~~~~~~l---~~~--~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~ 88 (210)
T 1gsm_A 17 VAVALGASRQLTCRL---ACADRGASVQWRGLDTSL---GAV--QSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHT 88 (210)
T ss_dssp EEEETTCCEEEEEEE---CCSSTTCEEEEESSTTTT---CCE--EEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eEEeCCCCEEEEEEC---CCCCCCcceEEeeccccc---CcE--EecCCccEEEECccCcccCceEEEEEEeCCCceEEE
Confidence 358899999999987 45555 99999965443 122 223456789999999999999999999998888889
Q ss_pred EEEEEeccCCCCCCeEEecCCCcccccCCCeEEEEEEEeecCCC----CcEEEEEECCEEccCCCceE--EEE-------
Q psy2166 291 VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP----ELKVEWFHNGKPIFHKNRVK--MVS------- 357 (805)
Q Consensus 291 ~~l~v~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p----~~~v~W~~~g~~l~~~~~~~--~~~------- 357 (805)
+.|+|+. +|........ .+.+|+.+ |.|.+.+ ..| .++|.|+||+++|....... +..
T Consensus 89 ~~ltV~~-----~P~~~~i~~~--~~~~g~~~-l~C~a~g-~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~ 159 (210)
T 1gsm_A 89 VQLLVYA-----FPNQLTVSPA--ALVPGDPE-VACTAHK-VTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQG 159 (210)
T ss_dssp EEEEEEB-----CCSEEEEESS--SBCTTCCE-EEEEEEE-EBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSS
T ss_pred EEEEEEe-----cCCCcEEccc--eEEeCCce-EEEEeCC-CCCCCCCCcEEEEEECCEEcccccccccceecccccccC
Confidence 9999984 4443332222 36778888 9999984 345 46999999999996432111 100
Q ss_pred -eCc----EEEEEEcccCcCCceEEEEEEEeCce
Q psy2166 358 -DFG----FVVMDIAYVQSHDSGEYVCRAWNKYG 386 (805)
Q Consensus 358 -~~~----~~~l~i~~v~~~d~G~Y~C~a~n~~g 386 (805)
... ..+|.+.....+|.+.|+|.|.+..-
T Consensus 160 ~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 160 DEDVLFRVTERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp CCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred CcceEEEEEEEEeecCCcccCCceEEEEEEeeCC
Confidence 111 12355556667777899999998763
No 358
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=127.82 Aligned_cols=94 Identities=27% Similarity=0.486 Sum_probs=83.7
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCC-eEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHR-IRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+....+ +....+++..+|.|.++..+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 4 APPTFKVSLMDQ-SVREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCK 80 (99)
T ss_dssp EEEEEEECCCCE-EEETTCCEEEEEEEE--EESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEEcCCce-EecCCCEEEEEEEEE--EcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEE
Confidence 578898888888 999999999999998 899999999999999887654 4445566777899999999999999999
Q ss_pred EEcCCccEEEEEEEEEEE
Q psy2166 769 ATNKWGQAEISVNLECVV 786 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~ 786 (805)
|.|..|....++.|.|..
T Consensus 81 a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 81 AVNEYGARQCEARLEVRG 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCceeEEEEEEEEC
Confidence 999999999999999863
No 359
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.63 E-value=6.7e-15 Score=146.40 Aligned_cols=174 Identities=15% Similarity=0.169 Sum_probs=117.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEE--------------ccCCCceEEEE-eCcEEEEEEcccCcCCceEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKP--------------IFHKNRVKMVS-DFGFVVMDIAYVQSHDSGEYV 378 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~--------------l~~~~~~~~~~-~~~~~~l~i~~v~~~d~G~Y~ 378 (805)
+.+|+.++|.|.+. +.+.+.+.|+|. +.. .....++.+.. ......|.|.+++.+|+|.|.
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 90 (245)
T 3nfj_J 13 QPVGSPLSLECTVE--GTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYL 90 (245)
T ss_dssp EETTCCEEEEEEEE--SCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ecCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEE
Confidence 78999999999998 778899999982 111 01124555554 346778999999999999999
Q ss_pred EEEEeCce------eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 379 CRAWNKYG------EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 379 C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
|.+.|..| .......|.|....
T Consensus 91 C~~~~~~g~~~~~~~~~~~~~l~V~~~~---------------------------------------------------- 118 (245)
T 3nfj_J 91 CAWSVSVGAGVPTIYFGEGSWLTVVEDL---------------------------------------------------- 118 (245)
T ss_dssp EEEECCTTTSSCCCEECCCEEEEEESCG----------------------------------------------------
T ss_pred EEEeeccCCCceeEEECCCeEEEEEccc----------------------------------------------------
Confidence 99998322 11233455554210
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEW 532 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W 532 (805)
....+|.+....+....+.+|+.++|.|.+.+...+.+.++|
T Consensus 119 --------------------------------------~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W 160 (245)
T 3nfj_J 119 --------------------------------------NKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSW 160 (245)
T ss_dssp --------------------------------------GGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred --------------------------------------CCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEE
Confidence 013456666554444446679999999999963334458999
Q ss_pred EECCEEccCCCceEEE--------eeCC---EEEEEEccCCCCC-CEEEEEEEEcCCcceE
Q psy2166 533 FYNGKKLPHGHRYRTF--------HDFG---IVILDILYCYEEN-SGVYECRATNKYGSDV 581 (805)
Q Consensus 533 ~~~g~~l~~~~~~~~~--------~~~~---~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~~ 581 (805)
+|||+.|..+...... .++. .+.|.|.....+| .|.|+|.|.|......
T Consensus 161 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~ 221 (245)
T 3nfj_J 161 WVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCSS
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCCc
Confidence 9999998654221100 1121 2468888887788 6699999999765543
No 360
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.63 E-value=6.4e-15 Score=148.05 Aligned_cols=176 Identities=19% Similarity=0.240 Sum_probs=117.6
Q ss_pred CceecccccccccCCCceEEEEEEEeeCCCC------CeEEEEEEC--CEEcc------------CCCcEEEEEEcCeEE
Q psy2166 203 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQ------TMTVEFLYN--GKPIE------------ASHRIRTVHAFGMVV 262 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p------~~~i~W~k~--g~~l~------------~~~~~~~~~~~~~~~ 262 (805)
+.+...+... .+.+|++++|.|.+ .+.+ .+.+.|||+ |..+. ...++......+...
T Consensus 6 ~~v~q~p~~v-~v~~G~~v~L~C~~--~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~ 82 (264)
T 2gjj_A 6 IVLTQTPSSL-PVSVGEKVTMTCKS--SQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFT 82 (264)
T ss_dssp CCEEEECSEE-EEETTCCEEEEEEE--SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cceEecCCeE-EecCCCcEEEEeEc--CCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEE
Confidence 4455545444 47899999999998 5665 689999984 32111 134565555556789
Q ss_pred EEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEEeccCC-------------CCCCeEE-ecCCCcccccCCCeEEEEEE
Q psy2166 263 LEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECVDKSK-------------GQPPKFT-SHIKSLEGLKDGDSAHFECT 327 (805)
Q Consensus 263 L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~~~~-------------~~~p~~~-~~~~~~~~~~~g~~~~l~C~ 327 (805)
|.|.+++.+|+|.|.|.+.+..+. ....+.|.|...+. ..+|.+. ..+... .+.+|+.++|.|.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~G~~v~L~C~ 161 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE-VVKTGASVKISCK 161 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCE-EECTTCCEEEEEE
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCE-EEcCCCcEEEEEE
Confidence 999999999999999999987542 12234566654310 0012222 222223 4889999999999
Q ss_pred EeecCCC--CcEEEEEECC--EE---cc--------------CCCceEEEEe--CcEEEEEEcccCcCCceEEEEEEEeC
Q psy2166 328 LTPVNDP--ELKVEWFHNG--KP---IF--------------HKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCRAWNK 384 (805)
Q Consensus 328 ~~~~~~p--~~~v~W~~~g--~~---l~--------------~~~~~~~~~~--~~~~~l~i~~v~~~d~G~Y~C~a~n~ 384 (805)
+. +.+ .+.+.|+|+. .. +. ...++.+..+ .....|.|.++..+|+|.|.|.+.|.
T Consensus 162 ~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 162 AS--GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EE--SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred Ee--CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 98 555 3799999963 21 11 0234554432 34678999999999999999999985
No 361
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.62 E-value=9.3e-16 Score=154.04 Aligned_cols=183 Identities=14% Similarity=0.186 Sum_probs=107.0
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEecC-----C------------CCceEEE--ecCcEEEEEEcc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPLE-----L------------GSRFKTT--ADFGFVTLDLTE 130 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i~-----~------------~~~~~~~--~~~~~~~L~I~~ 130 (805)
.+..+.+.+|++|+|.|.+. +.+.+.|.|+|. +.... . ..++... ......+|.|.+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 85 (259)
T 3omz_A 8 RTKSVIRQTGSSAEITCDLA--EGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRN 85 (259)
T ss_dssp ---CEEEETTCCEEEECCC-------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESS
T ss_pred CCceeEecCCCcEEEEEEEc--cCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECC
Confidence 34478899999999999998 567889999992 21110 0 0122221 122345799999
Q ss_pred cccCCCeEEEEEEEeCCe---eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 131 VYDRDQGIYTCRAWNLAG---ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g---~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
++.+|+|.|+|.+.+..+ .......|.|.......... +. .......+|.+..
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~--~~----------------------~~~~~~~~~~v~~ 141 (259)
T 3omz_A 86 LIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDA--KK----------------------DAAKKDGAQKVTQ 141 (259)
T ss_dssp CCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------------------------------CEEEC
T ss_pred CCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCcccc--cc----------------------ccccccCCeeeEE
Confidence 999999999999998765 23334567766432100000 00 0000012345555
Q ss_pred ccccccccCCCceEEEEEEEeeCCCCCeEEEEEECC--EEcc------------CCCcEEEEE--EcCeEEEEEcCCCCc
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG--KPIE------------ASHRIRTVH--AFGMVVLEILGTKIE 271 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g--~~l~------------~~~~~~~~~--~~~~~~L~i~~~~~~ 271 (805)
.+... .+.+|++++|.|.+. ...+.+.+.|||.+ ..+. ...++.... ......|.|.+++.+
T Consensus 142 ~p~~~-~v~~G~~v~L~C~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 219 (259)
T 3omz_A 142 AQSSV-SMPVRKAVTLNCLYE-TSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLE 219 (259)
T ss_dssp CCCCE-EEETTCCEEECCEEE-CCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGG
T ss_pred eCCEE-EEcCCCCEEEEEECC-CccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChh
Confidence 55444 478999999999873 23478899999843 1110 012333321 123467999999999
Q ss_pred ccEEEEEEEEc
Q psy2166 272 DTGVYTCRATN 282 (805)
Q Consensus 272 d~G~Y~C~~~n 282 (805)
|+|.|.|.+.+
T Consensus 220 DsG~Y~C~~~~ 230 (259)
T 3omz_A 220 DSAKYFCALGE 230 (259)
T ss_dssp GCSEEEEEEES
T ss_pred HCEEEEEEEeC
Confidence 99999999985
No 362
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.62 E-value=8.6e-15 Score=148.64 Aligned_cols=182 Identities=13% Similarity=0.092 Sum_probs=119.7
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec-------------C----CCCceEEEec-CcEEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL-------------E----LGSRFKTTAD-FGFVT 125 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i-------------~----~~~~~~~~~~-~~~~~ 125 (805)
+.+... +..+.+.+|+.++|.|.+. +.+.+.|.|+|++ ... . ...|+.+..+ ++..+
T Consensus 25 ~~v~~~-p~~v~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~s 101 (279)
T 2wbj_D 25 AVVSQH-PSWVISKSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLST 101 (279)
T ss_dssp CCEEEE-CSEEEEETTSCEEEEEEES--SSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEE
T ss_pred ceEEeC-CCeEEecCCCeEEEEEEeC--CCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEE
Confidence 444433 4468899999999999997 5778899999963 111 0 1357777653 46779
Q ss_pred EEEcccccCCCeEEEEEEEeCCe------eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCC
Q psy2166 126 LDLTEVYDRDQGIYTCRAWNLAG------ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSED 199 (805)
Q Consensus 126 L~I~~~~~~D~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (805)
|.|.+++.+|+|.|+|.+.+..+ .......|.|..... .
T Consensus 102 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~-----------------------------------~ 146 (279)
T 2wbj_D 102 LTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLK-----------------------------------N 146 (279)
T ss_dssp EEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGG-----------------------------------G
T ss_pred EEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCC-----------------------------------C
Confidence 99999999999999999998421 112234566654210 0
Q ss_pred CCCCceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE---EE----EEcC----eEEEEEcC
Q psy2166 200 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR---TV----HAFG----MVVLEILG 267 (805)
Q Consensus 200 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~---~~----~~~~----~~~L~i~~ 267 (805)
..+|.+....+....+.+|+.++|.|.+.. ..|. +.|.|+|+|+.+....... .. ..++ .+.|.|..
T Consensus 147 ~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~ 225 (279)
T 2wbj_D 147 VFPPEVAVFEPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSA 225 (279)
T ss_dssp CBCCEEEEEECCHHHHHHHSCCEEEEEEEE-EBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCS
T ss_pred CCCCEEEEECCCcccccCCCceEEEEEEee-EcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEECh
Confidence 134555543322223557899999999842 2353 8999999999886542211 00 0122 24588888
Q ss_pred CCCc-ccEEEEEEEEcCCee
Q psy2166 268 TKIE-DTGVYTCRATNKWGQ 286 (805)
Q Consensus 268 ~~~~-d~G~Y~C~~~n~~g~ 286 (805)
...+ |.|.|+|.|.|....
T Consensus 226 ~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 226 TFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp TTTTCTTCEEEEEEEECCBC
T ss_pred HHhccCCCEEEEEEEeCCCC
Confidence 7775 477999999997543
No 363
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.62 E-value=1.6e-14 Score=145.82 Aligned_cols=177 Identities=16% Similarity=0.199 Sum_probs=115.6
Q ss_pred CCceecccccccccCCCceEEEEEEEeeCCCC-----CeEEEEEECC--EE---cc---------CCCcEEEEEEcCeEE
Q psy2166 202 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQ-----TMTVEFLYNG--KP---IE---------ASHRIRTVHAFGMVV 262 (805)
Q Consensus 202 ~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p-----~~~i~W~k~g--~~---l~---------~~~~~~~~~~~~~~~ 262 (805)
.+.+...+... .+.+|++++|.|.+ .+.+ .+.+.|||+. .. +. ...++......+...
T Consensus 15 ~~~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~ 91 (268)
T 1x9q_A 15 DVVMTQTPLSL-PVSLGDQASISCRS--SQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFT 91 (268)
T ss_dssp CCCEEEECSEE-CCCTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cceEEeeCCeE-EecCCCCEEEEeEe--cCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEE
Confidence 34555555544 48899999999998 5555 4899999852 21 11 134565555556789
Q ss_pred EEEcCCCCcccEEEEEEEEcCCee-EEEEEEEEEeccCCCC----CCe--------------EEecCCCcccccCCCeEE
Q psy2166 263 LEILGTKIEDTGVYTCRATNKWGQ-AEISVNLECVDKSKGQ----PPK--------------FTSHIKSLEGLKDGDSAH 323 (805)
Q Consensus 263 L~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~~~~~~----~p~--------------~~~~~~~~~~~~~g~~~~ 323 (805)
|.|.+++.+|+|.|.|.+.|..+. ......|.|...+... +|. ....+... .+.+|+.++
T Consensus 92 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~-~v~~G~~v~ 170 (268)
T 1x9q_A 92 LKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGG-LVQPGGAMK 170 (268)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCE-EECTTCCEE
T ss_pred EEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCce-EecCCCcEE
Confidence 999999999999999999987542 2223455554322101 110 11222233 488999999
Q ss_pred EEEEEeecCCC--CcEEEEEEC--CEEc-------------------cCCCceEEEEeC--cEEEEEEcccCcCCceEEE
Q psy2166 324 FECTLTPVNDP--ELKVEWFHN--GKPI-------------------FHKNRVKMVSDF--GFVVMDIAYVQSHDSGEYV 378 (805)
Q Consensus 324 l~C~~~~~~~p--~~~v~W~~~--g~~l-------------------~~~~~~~~~~~~--~~~~l~i~~v~~~d~G~Y~ 378 (805)
|.|.+. +.+ .+.+.|+|+ +..+ ....++.+..+. ....|.|.+++.+|+|.|.
T Consensus 171 L~C~~~--~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 248 (268)
T 1x9q_A 171 LSCVTS--GFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYY 248 (268)
T ss_dssp EEEEEE--SSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred EEEEec--CccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEE
Confidence 999997 544 378999985 2221 123466665442 3567999999999999999
Q ss_pred EEEEeC
Q psy2166 379 CRAWNK 384 (805)
Q Consensus 379 C~a~n~ 384 (805)
|.+.+.
T Consensus 249 C~a~~~ 254 (268)
T 1x9q_A 249 CTGASY 254 (268)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 999875
No 364
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.62 E-value=1e-15 Score=128.35 Aligned_cols=95 Identities=23% Similarity=0.454 Sum_probs=83.0
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEE-EeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-VHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+....+..+ ....+...|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~~~~~p~~~-~~~~G~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 4 GPPRFIQVPENM-SIDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp EEEECCCCCCCE-EEETTCCEEEEEECE--EESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEeCCCCE-EecCCCEEEEEEEEE--eeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEE
Confidence 578888888888 999999999999998 899999999999999887765433 4456667899999999999999999
Q ss_pred EEcCCccEEEEEEEEEEEe
Q psy2166 769 ATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~ 787 (805)
|.|..|..+.++.|.|...
T Consensus 81 a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 81 AKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEcCCCeEEEEEEEEEEec
Confidence 9999999999999999753
No 365
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.62 E-value=4.6e-15 Score=147.10 Aligned_cols=170 Identities=15% Similarity=0.142 Sum_probs=115.1
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEE--------------CCEEcc---CCCceEEEEe-CcEEEEEEcccCcCCceEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFH--------------NGKPIF---HKNRVKMVSD-FGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~--------------~g~~l~---~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y 377 (805)
+.+|+.++|.|.+. + +.+.|.|+| ++.... ...++.+..+ .....|.|.+++.+|+|.|
T Consensus 14 v~~G~~v~L~C~~~--~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 90 (240)
T 3q5y_A 14 KEKGGRSVLTCIPI--S-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMY 90 (240)
T ss_dssp EETTCCEEEEEECC--T-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEE
T ss_pred ecCCCcEEEEEEeC--C-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEE
Confidence 78999999999985 4 778999998 222111 1246666543 3466899999999999999
Q ss_pred EEEEEeC--c-eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCce
Q psy2166 378 VCRAWNK--Y-GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQS 454 (805)
Q Consensus 378 ~C~a~n~--~-g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (805)
.|.+.+. . ........|.|....
T Consensus 91 ~C~~~~~~~~~~~~~~~~~l~V~~~~------------------------------------------------------ 116 (240)
T 3q5y_A 91 FCASSLRWGDEQYFGPGTRLTVLEDL------------------------------------------------------ 116 (240)
T ss_dssp EEEEESSTTBCCEECCCEEEEEESCG------------------------------------------------------
T ss_pred EEEEccCCCcceEEcCCEEEEEeccc------------------------------------------------------
Confidence 9999832 1 122233455554210
Q ss_pred EEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-EEEEE
Q psy2166 455 AHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-VVEWF 533 (805)
Q Consensus 455 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~v~W~ 533 (805)
....+|.+....+....+.+|+.++|.|.+.+. .|.+ .++|+
T Consensus 117 ------------------------------------~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~-~P~~~~v~W~ 159 (240)
T 3q5y_A 117 ------------------------------------RNVTPPKVSLFEPSKAEIANKQKATLVCLARGF-FPDHVELSWW 159 (240)
T ss_dssp ------------------------------------GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE-BSSCEEEEEE
T ss_pred ------------------------------------cCCCCCeeEEeCCchhhcccCCceEEEEEEeeE-ECCCeEEEEE
Confidence 013556666544444446789999999999962 4544 89999
Q ss_pred ECCEEccCCCceE---EEeeCCE----EEEEEccCCCCC-CEEEEEEEEcCCcc
Q psy2166 534 YNGKKLPHGHRYR---TFHDFGI----VILDILYCYEEN-SGVYECRATNKYGS 579 (805)
Q Consensus 534 ~~g~~l~~~~~~~---~~~~~~~----~~L~i~~v~~~d-~G~Y~C~a~n~~g~ 579 (805)
|||+.+..+.+.. ....++. +.|.|.....+| .|.|+|.|.|....
T Consensus 160 ~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 160 VNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp ETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 9999997543221 1222332 249999888888 67999999987654
No 366
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.62 E-value=6.6e-15 Score=122.44 Aligned_cols=89 Identities=18% Similarity=0.318 Sum_probs=80.6
Q ss_pred eeecCCcccccCCCCeEEEEEEEeecCC-CCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcC
Q psy2166 694 FTSEFQHLSNLSEGEIAHFEASLIPVGD-QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK 772 (805)
Q Consensus 694 ~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 772 (805)
+...+.+. .+.+|+.+.|.|.+. |. |.|.|.|+|++..+..+.++.+...++...|.|.++..+|+|.|+|.|.|.
T Consensus 4 v~~~~~~~-~v~~G~~v~l~C~~~--g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (97)
T 2bk8_A 4 VSGQIMHA-VGEEGGHVKYVCKIE--NYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVND 80 (97)
T ss_dssp EECCCCCE-EECTTCCEEEEEEEE--SCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred eeccCcCE-EEcCCCcEEEEEEEe--ccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECC
Confidence 34445666 899999999999999 86 999999999999999999998877888889999999999999999999999
Q ss_pred CccEEEEEEEEEE
Q psy2166 773 WGQAEISVNLECV 785 (805)
Q Consensus 773 ~G~~~~~~~l~V~ 785 (805)
.|....++.|.|.
T Consensus 81 ~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 81 YGEDSSYAELFVK 93 (97)
T ss_dssp SCEEEEEEEEEET
T ss_pred CCeEeEEEEEEEE
Confidence 9999999999885
No 367
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1e-15 Score=130.81 Aligned_cols=99 Identities=21% Similarity=0.330 Sum_probs=86.8
Q ss_pred CCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccC-CCCeEEEee-CcEEEEEEcCCCCCCCEEEE
Q psy2166 689 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA-SHRIRTVHA-FGMVVLEILGTKIEDTGVYT 766 (805)
Q Consensus 689 ~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~-~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 766 (805)
..+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|+.+.. ..++.+..+ .+...|.|.++..+|+|.|+
T Consensus 6 ~~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 82 (110)
T 2dm2_A 6 SGAPFFEMKLKHY-KIFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYT 82 (110)
T ss_dssp SCCCCBSSCCCCE-EEETTCCEEEEEEBC--CSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCE
T ss_pred CCCCEEEecCcCe-EEeCCCeEEEEEEEE--ecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEE
Confidence 3689999888888 999999999999998 999999999999999886 466666554 56678999999999999999
Q ss_pred EEEEcCCccEEEEEEEEEEEeCCC
Q psy2166 767 CRATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 767 C~a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
|.|.|.+|.....+.|.|...+..
T Consensus 83 C~a~N~~g~~~~~~~l~V~~~~~~ 106 (110)
T 2dm2_A 83 IMAANPQGRISCTGRLMVQAVNSG 106 (110)
T ss_dssp EEEECTTCCEEECCCEEEECCSCC
T ss_pred EEEEECCCeEEEEEEEEEECCCCC
Confidence 999999999999999999775544
No 368
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.62 E-value=1e-14 Score=142.52 Aligned_cols=166 Identities=15% Similarity=0.219 Sum_probs=113.4
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EE---c----------------cCCCceEEEEe--CcEEEEEEcccCcC
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KP---I----------------FHKNRVKMVSD--FGFVVMDIAYVQSH 372 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~---l----------------~~~~~~~~~~~--~~~~~l~i~~v~~~ 372 (805)
+.+|+.++|.|.+.+...+.+.+.|+|.. .. + ....++.+..+ .....|.|.+++.+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 91 (221)
T 3m8o_H 12 VQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLKSD 91 (221)
T ss_dssp ECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCCGG
T ss_pred EcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCCHH
Confidence 78999999999997321336789999732 11 1 01256666654 45678999999999
Q ss_pred CceEEEEEEEeCc--eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeec
Q psy2166 373 DSGEYVCRAWNKY--GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLK 450 (805)
Q Consensus 373 d~G~Y~C~a~n~~--g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (805)
|+|.|.|.+.+.. ......+.|.|...
T Consensus 92 DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~--------------------------------------------------- 120 (221)
T 3m8o_H 92 DTAMYYCVIRGDVYNRQWGQGTLVTVSSA--------------------------------------------------- 120 (221)
T ss_dssp GCEEEEEEEESCTTCCCBBCCEEEEECSC---------------------------------------------------
T ss_pred HCEEEEEEEECCChhheECCCEEEEEecC---------------------------------------------------
Confidence 9999999998763 12223345555311
Q ss_pred CCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC--c
Q psy2166 451 EGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD--L 528 (805)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~--~ 528 (805)
...+|.+....+... .+|+.++|.|.+.+ ..|. +
T Consensus 121 -----------------------------------------~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~-~~P~~~~ 156 (221)
T 3m8o_H 121 -----------------------------------------SPTSPKVFPLSLCST--QPDGNVVIACLVQG-FFPQEPL 156 (221)
T ss_dssp -----------------------------------------CCBCCEEEEEECCSC--CCTTEEEEEEEEEE-EBSSCSE
T ss_pred -----------------------------------------CCCCCeEEEecCccc--ccCCCEEEEEEEEe-eECCCCE
Confidence 124555553222222 68999999999996 2554 6
Q ss_pred EEEEEECCEEcc----------CCCceEEEeeCCEEEEEEccCCCCCCEEEEEEEEcCCcceE
Q psy2166 529 VVEWFYNGKKLP----------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV 581 (805)
Q Consensus 529 ~v~W~~~g~~l~----------~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 581 (805)
.++|+++|+.+. .+.++.+ .+.|.|.....+|+|.|+|.|.|..+...
T Consensus 157 ~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 157 SVTWSESGQGVTARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp EEEESCCSTTCEEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEEEECCEECceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 999999998762 2222222 23599999999999999999999876643
No 369
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.62 E-value=1.7e-15 Score=147.27 Aligned_cols=177 Identities=15% Similarity=0.102 Sum_probs=112.2
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEECC--Eec----------------CCCCceEEEec--CcEEEEEEccccc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KPL----------------ELGSRFKTTAD--FGFVTLDLTEVYD 133 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~i----------------~~~~~~~~~~~--~~~~~L~I~~~~~ 133 (805)
..+.+.+|+.++|.|.+.+...+.+.|.|+|+. ..+ ...+|+.+..+ ++.++|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (215)
T 1c5d_H 8 GPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQT 87 (215)
T ss_dssp CCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCG
T ss_pred CCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCc
Confidence 367899999999999998422235789999852 211 01347777653 3567999999999
Q ss_pred CCCeEEEEEEEeCCee---EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 134 RDQGIYTCRAWNLAGE---TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
+|+|.|.|.+.+..+. ....+.|.|.... ..+|.+....+
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~P~i~~~~~ 130 (215)
T 1c5d_H 88 EDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ-------------------------------------TTAPSVYPLAP 130 (215)
T ss_dssp GGCEEEEEEECCSSSCSCCBCCCEEEEECSSC-------------------------------------CBCCCEEEECC
T ss_pred ccCEEEEEEEecCCcccceEcCCEEEEecCCC-------------------------------------CCCCeEEeccC
Confidence 9999999999886421 1223567765311 12344443322
Q ss_pred cccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcCeEEE--EEcCCCCcccEEEEEEEEcCCeeE
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFGMVVL--EILGTKIEDTGVYTCRATNKWGQA 287 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~~~~L--~i~~~~~~d~G~Y~C~~~n~~g~~ 287 (805)
.. .+.+|+.++|.|.+. ...|.+ .+.|+++|..+....... ....+...+ .+.....+| |.|+|.|.|..+..
T Consensus 131 ~~-~~~~g~~v~L~C~~~-g~~P~p~~v~W~~~g~~~~~~~~~~-~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~ 206 (215)
T 1c5d_H 131 GC-GDTTSSTVTLGCLVK-GYFPEPVTVTWNSGALSSDVHTFPA-VLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASST 206 (215)
T ss_dssp CS-SCCCCSSEEEEEEEE-EEBSSCCEEEEGGGTTCCSCCBCCC-EEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTE
T ss_pred Ch-hhccCCcEEEEEEEe-eeEcCCcEEEEccCCccCceEecCc-ccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCc
Confidence 22 257899999999984 233766 999999987643211111 111232222 122444456 99999999988766
Q ss_pred EEEE
Q psy2166 288 EISV 291 (805)
Q Consensus 288 ~~~~ 291 (805)
....
T Consensus 207 ~~~~ 210 (215)
T 1c5d_H 207 KVDK 210 (215)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 5433
No 370
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.62 E-value=7.9e-15 Score=145.02 Aligned_cols=174 Identities=11% Similarity=0.089 Sum_probs=112.9
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c------------CCCCceEEEec-CcEEEEEEccccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L------------ELGSRFKTTAD-FGFVTLDLTEVYD 133 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i------------~~~~~~~~~~~-~~~~~L~I~~~~~ 133 (805)
.+..+.+.+|+.++|.|.+. .+.+.|.|+|++ .. + ....|+.+..+ ++..+|.|.+++.
T Consensus 5 ~p~~v~v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 5 SPRNKVAVTGGKVTLSCQQT---NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp ECSEEEEETTCCEEEEEEES---SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred CCCeeEEeCCCcEEEEEEeC---CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 34467899999999999986 357899999953 11 1 12457776643 4567999999999
Q ss_pred CCCeEEEEEEEeCCe---e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecc
Q psy2166 134 RDQGIYTCRAWNLAG---E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSE 208 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g---~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 208 (805)
+|+|.|+|.+.+..+ . ......|.|..... ...+|.+...
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~-----------------------------------~~~~P~v~~~ 126 (238)
T 1bec_A 82 SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLR-----------------------------------QVTPPKVSLF 126 (238)
T ss_dssp GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGG-----------------------------------GCBCCEEEEE
T ss_pred ccCEEEEEEEecCCCCccccccCCCEEEEEeccCC-----------------------------------CCCCCceEEE
Confidence 999999999998631 1 11234566654210 0134555443
Q ss_pred cccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE---EEEEcCe----EEEEEcCCCCcc-cEEEEEE
Q psy2166 209 FQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR---TVHAFGM----VVLEILGTKIED-TGVYTCR 279 (805)
Q Consensus 209 ~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~---~~~~~~~----~~L~i~~~~~~d-~G~Y~C~ 279 (805)
.+....+.+|+.++|.|.+.. ..|. +.+.|+|+|..+....... ....++. +.|.|.....+| .|.|+|.
T Consensus 127 ~~~~~~~~~g~~~~L~C~~~g-~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~ 205 (238)
T 1bec_A 127 EPSKAEIANKQKATLVCLARG-FFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQ 205 (238)
T ss_dssp CCCSTTCSSSCSCSEEEEEEE-EBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEE
T ss_pred CCChHHcccCCceEEEEEEee-EeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEE
Confidence 333234668999999999842 2354 5999999999886543211 1223332 234444333333 6799999
Q ss_pred EEcCC
Q psy2166 280 ATNKW 284 (805)
Q Consensus 280 ~~n~~ 284 (805)
|.|..
T Consensus 206 v~~~~ 210 (238)
T 1bec_A 206 VQFHG 210 (238)
T ss_dssp EEECC
T ss_pred EEcCC
Confidence 99864
No 371
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.62 E-value=3.1e-15 Score=149.62 Aligned_cols=175 Identities=10% Similarity=0.088 Sum_probs=114.6
Q ss_pred CCCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Eec------C-----------CCCceEEEec--CcEEEEEEc
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KPL------E-----------LGSRFKTTAD--FGFVTLDLT 129 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~i------~-----------~~~~~~~~~~--~~~~~L~I~ 129 (805)
+..+.+.+|++|+|.|.+. +.+ .+.|.|+|+. ..+ . ...|+.+..+ .+..+|.|.
T Consensus 13 p~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKAS--GYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp CSEEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred CCCEEEcCCCCEEEEEEeC--CcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 3467899999999999998 344 6789999863 211 0 1357777654 356789999
Q ss_pred ccccCCCeEEEEEEEeCCe-e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 130 EVYDRDQGIYTCRAWNLAG-E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 130 ~~~~~D~G~Y~C~a~n~~g-~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
+++.+|+|.|.|.+.+..+ . ....+.|.|.... ..+|.+.
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-------------------------------------~~~P~v~ 133 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK-------------------------------------TTAPSVY 133 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC-------------------------------------CBCCEEE
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCC-------------------------------------CCCCeEE
Confidence 9999999999999998642 1 1123466665311 1234443
Q ss_pred cccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEc---CeEEEEEcCCCCcccEEEEEEEEc
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAF---GMVVLEILGTKIEDTGVYTCRATN 282 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n 282 (805)
...+.. .+.+|+.++|.|.+.. ..|.+ .|.|++++..+...........+ ..+.|.|.....+| |.|+|.|.|
T Consensus 134 ~~~p~~-~v~~g~~v~L~C~~~g-~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n 210 (261)
T 2xqy_G 134 PLAPVC-GDTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAH 210 (261)
T ss_dssp EECCCC-C--CCSEEEEEEEEEE-EBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEE
T ss_pred EeCCCc-cccCCCcEEEEEEEEe-EeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEE
Confidence 322222 2568999999999852 24655 99999998765321000001111 13579999888888 999999999
Q ss_pred CCeeEEE
Q psy2166 283 KWGQAEI 289 (805)
Q Consensus 283 ~~g~~~~ 289 (805)
.......
T Consensus 211 ~~~~~~~ 217 (261)
T 2xqy_G 211 PASSTKV 217 (261)
T ss_dssp GGGTEEE
T ss_pred CCCCccE
Confidence 7655443
No 372
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.62 E-value=3.6e-15 Score=149.15 Aligned_cols=174 Identities=13% Similarity=0.132 Sum_probs=107.5
Q ss_pred cccCCCeEEEEEEEeeCCCC--CcEEEEEECC--EEc------c-----------CCCceEEEee--CCEEEEEEccCCC
Q psy2166 507 QLKEGQSAHFEARLTPVTDP--DLVVEWFYNG--KKL------P-----------HGHRYRTFHD--FGIVILDILYCYE 563 (805)
Q Consensus 507 ~v~~G~~v~L~C~v~~~g~p--~~~v~W~~~g--~~l------~-----------~~~~~~~~~~--~~~~~L~i~~v~~ 563 (805)
.+.+|++++|.|.+. +.+ .+.+.|+|+. ..+ . ...|+.+..+ .+...|.|.+++.
T Consensus 17 ~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 94 (261)
T 2xqy_G 17 LVKPGASVKMSCKAS--GYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTS 94 (261)
T ss_dssp EECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEeC--CcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCc
Confidence 489999999999998 544 6789999862 211 0 1246655443 3456788988888
Q ss_pred CCCEEEEEEEEcCCcceEEEEEEEEeeeeeeeecCCCCeEEEEECCEEccCCCceEEEeeCCEEEEEeccCCCCCcEEEE
Q psy2166 564 ENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYE 643 (805)
Q Consensus 564 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 643 (805)
+|+|.|.|.+.|..+.... |
T Consensus 95 ~DsG~Y~C~~~~~~~~~~~----------------------~-------------------------------------- 114 (261)
T 2xqy_G 95 EDSAVYYCGRLGYVYGFDY----------------------W-------------------------------------- 114 (261)
T ss_dssp GGCEEEEEEEECTTSSEEE----------------------E--------------------------------------
T ss_pred ccCeEEEEEEecCCCcceE----------------------E--------------------------------------
Confidence 8999999988775321000 0
Q ss_pred EEEEeCCcceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCeEEEEEEEeecC-CC
Q psy2166 644 CRATNKYGSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVG-DQ 722 (805)
Q Consensus 644 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p 722 (805)
+ ..+.|.|...+ ..+|.+....... .+.+|+.++|.|.+. | .|
T Consensus 115 -------~---~~~~L~V~~~~-----------------------~~~P~v~~~~p~~-~v~~g~~v~L~C~~~--g~~P 158 (261)
T 2xqy_G 115 -------G---QGTTLTVSSAK-----------------------TTAPSVYPLAPVC-GDTTGSSVTLGCLVK--GYFP 158 (261)
T ss_dssp -------C---CCEEEEECSSC-----------------------CBCCEEEEECCCC-C--CCSEEEEEEEEE--EEBS
T ss_pred -------C---CCEEEEEccCC-----------------------CCCCeEEEeCCCc-cccCCCcEEEEEEEE--eEeC
Confidence 0 00112222100 0234444322223 467899999999998 5 47
Q ss_pred Ce-EEEEEECCEEccCCCCeEEEeeCc---EEEEEEcCCCCCCCEEEEEEEEcCCccEEEE
Q psy2166 723 TM-TVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGVYTCRATNKWGQAEIS 779 (805)
Q Consensus 723 ~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 779 (805)
.+ .|.|+++|..+.......+...+. ...|.|..+..+| |.|+|.|.|........
T Consensus 159 ~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 159 EPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp SCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred CCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 66 999999997653211101111111 2469999999888 99999999987765443
No 373
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.62 E-value=6.4e-15 Score=146.61 Aligned_cols=170 Identities=16% Similarity=0.201 Sum_probs=114.6
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEE--------------CCEEccCC----CceEEEEe-CcEEEEEEcccCcCCceE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFH--------------NGKPIFHK----NRVKMVSD-FGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~--------------~g~~l~~~----~~~~~~~~-~~~~~l~i~~v~~~d~G~ 376 (805)
+.+|+.++|.| .. +.+.+.+.|+| ++..+... .++.+..+ .+...|.|.+++.+|+|.
T Consensus 14 v~~G~~v~L~C-~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 90 (245)
T 4ei6_B 14 IDMGQMVTLNC-DP--VSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAV 90 (245)
T ss_dssp EETTCCEEEEE-EC--CTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEE
T ss_pred ecCCCCEEEEE-Ec--CCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEE
Confidence 78999999999 43 77888999998 33222211 56666543 345689999999999999
Q ss_pred EEEEEEeCc----eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 377 YVCRAWNKY----GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 377 Y~C~a~n~~----g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
|.|.+.+.. +.......|.|....
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------------------------- 118 (245)
T 4ei6_B 91 YFCASSFWGAYAEQFFGPGTRLTVLEDL---------------------------------------------------- 118 (245)
T ss_dssp EEEEEECSSTTCCCEECCCEEEEEESCG----------------------------------------------------
T ss_pred EEEEEccCCCcceEEEcCCcEEEEeccc----------------------------------------------------
Confidence 999998532 222233455554210
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVE 531 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~ 531 (805)
....+|.+....+....+.+|+.++|.|.+.+. .|. +.++
T Consensus 119 --------------------------------------~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~-~p~~~~v~ 159 (245)
T 4ei6_B 119 --------------------------------------KNVFPPEVAVFEPSEAEISHTQKATLVCLATGF-YPDHVELS 159 (245)
T ss_dssp --------------------------------------GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE-BSSCEEEE
T ss_pred --------------------------------------CCCCCceEEEeCCCcccccCCCceEEEEEEeeE-eCCCeEEE
Confidence 012456665554444446789999999999963 444 4999
Q ss_pred EEECCEEccCCCceEEE--------eeCC---EEEEEEccCCCCC-CEEEEEEEEcCCcc
Q psy2166 532 WFYNGKKLPHGHRYRTF--------HDFG---IVILDILYCYEEN-SGVYECRATNKYGS 579 (805)
Q Consensus 532 W~~~g~~l~~~~~~~~~--------~~~~---~~~L~i~~v~~~d-~G~Y~C~a~n~~g~ 579 (805)
|++||+.+..+.+.... .++. .+.|.|.....+| .|.|+|.|.|....
T Consensus 160 W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 160 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 99999998754221110 0111 2348888887788 99999999987544
No 374
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.62 E-value=1.5e-15 Score=146.56 Aligned_cols=181 Identities=15% Similarity=0.149 Sum_probs=106.2
Q ss_pred CeEEecCCCCce-ecCCCcEEEEEEEecCCC--CCceEEEEECCEecCCCC--ceEEEecCc---EEEEEEcccccCCCe
Q psy2166 66 PVFIVPLKPEFK-LGEAQPLHLEAQVEPKND--PNLKIEWIFNGKPLELGS--RFKTTADFG---FVTLDLTEVYDRDQG 137 (805)
Q Consensus 66 p~~~~~~~~~~~-v~~G~~v~L~C~~~~~~~--p~~~v~W~k~g~~i~~~~--~~~~~~~~~---~~~L~I~~~~~~D~G 137 (805)
|.+.+.++.... +.+|+.++|.|.+.+... |.+.|.|+|+|..+.... ......++. ...|.|.....+|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 444444443333 379999999999984311 246999999998876432 111111221 123455555566699
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.|.|..+.......+.+. . ....+|.+.........+ +
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~--~-----------------------------------~~~~~P~v~~~~~~~~~~-~ 123 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKA--K-----------------------------------GQPREPQVYTLPPSRDEL-T 123 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCC--C-----------------------------------SCCBCCEEEEECCCGGGG-G
T ss_pred eEEEEEEcCcCCcceEEEeccC--C-----------------------------------CCCcCCEEEEECCChHHh-c
Confidence 9999999987654222222110 0 001345554433332223 4
Q ss_pred CceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEE-EEEcCe----EEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 218 GEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRT-VHAFGM----VVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~-~~~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
|..++|.|.+.. .+|. +.|.|+|+|..+........ ...++. ..|.|.....+|.|.|+|.|.|...
T Consensus 124 ~~~~~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 124 KNQVSLTCLVKG-FYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp SSEEEEEEEEEE-EBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCcEEEEEEEeC-eECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 556999999852 2443 59999999998863211111 122232 3455665556789999999999754
No 375
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.62 E-value=6.4e-15 Score=147.12 Aligned_cols=134 Identities=8% Similarity=0.041 Sum_probs=91.9
Q ss_pred CEEEEEeccCCCCCcEEEEEEEEeCC----cceEEEEEEEEeeccccccccccccccCCCCCCCCCCCCCCCeeeecCCc
Q psy2166 625 GIVILDILYCYEENSGVYECRATNKY----GSDVTKASLKCVSKTNLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQH 700 (805)
Q Consensus 625 ~~~~L~i~~~~~~d~G~Y~C~a~n~~----g~~~~~~~l~V~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~ 700 (805)
+...|.|.+++.+|+|.|.|.+.|.. +.......|.|...+ ..+|.+......
T Consensus 77 ~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-----------------------~~~P~i~~~~~~ 133 (253)
T 3liz_H 77 NTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK-----------------------TTPPSVYPLAPG 133 (253)
T ss_dssp TEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC-----------------------CBCCEEEEECC-
T ss_pred CEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC-----------------------CCCCeEEEecCC
Confidence 56679999999999999999998863 222334567775211 146777755554
Q ss_pred ccccCCCCeEEEEEEEeecC-CCCe-EEEEEECCEEccCCCCeEEEeeCc---EEEEEEcCCCCCCCEEEEEEEEcCCcc
Q psy2166 701 LSNLSEGEIAHFEASLIPVG-DQTM-TVEFLYNGKPIEASHRIRTVHAFG---MVVLEILGTKIEDTGVYTCRATNKWGQ 775 (805)
Q Consensus 701 ~~~v~~G~~~~l~C~~~~~g-~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 775 (805)
. .+..|+.++|.|.+. | .|.+ .|.|+++|..+...........+. ...|.|..+..+| |.|+|.|.|..+.
T Consensus 134 ~-~~~~g~~v~L~C~~~--g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 134 S-AAQTNSMVTLGCLVK--GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 209 (253)
T ss_dssp ------CCEEEEEEEEE--EEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGT
T ss_pred c-ccCCCCcEEEEEEEe--eEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCC
Confidence 4 577899999999998 5 6766 899999997432110000111111 1469999999999 9999999999998
Q ss_pred EEEEEEEEEE
Q psy2166 776 AEISVNLECV 785 (805)
Q Consensus 776 ~~~~~~l~V~ 785 (805)
......|.+.
T Consensus 210 ~~~~~~~~~~ 219 (253)
T 3liz_H 210 TKVDKKIVPR 219 (253)
T ss_dssp EEEEEECCCC
T ss_pred cceEEEecCc
Confidence 8888877765
No 376
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.61 E-value=7.6e-16 Score=125.16 Aligned_cols=88 Identities=15% Similarity=0.180 Sum_probs=75.3
Q ss_pred CCCeeeecCCcc-cccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHL-SNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~-~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.||.|..++.+. +.+.+|+.+.|.|.+. + |.|.|+|+|||++|..+.++.+..+++...|.|.++..+|+|.|+|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~--~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~ 79 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVD--R-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCV 79 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECS--C-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEEC--C-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEE
Confidence 467777766654 2567999999999985 5 88899999999999999999999999999999999999999999999
Q ss_pred EEcCCccEEEEEEEEE
Q psy2166 769 ATNKWGQAEISVNLEC 784 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V 784 (805)
|.| .+.++.|+|
T Consensus 80 a~n----~~~~~~ltV 91 (91)
T 2lvc_A 80 AGD----ECAYFTVTI 91 (91)
T ss_dssp CSS----CEEEEEEEC
T ss_pred Ecc----eEEEEEEEC
Confidence 966 567777765
No 377
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.61 E-value=1.2e-15 Score=150.42 Aligned_cols=183 Identities=12% Similarity=0.093 Sum_probs=111.7
Q ss_pred CCeEEecCCCCce-ecCCCcEEEEEEEecCC-CCCc-eEEEEECCEecCCCCce-EEEecC----cEEEEEEcccccCCC
Q psy2166 65 KPVFIVPLKPEFK-LGEAQPLHLEAQVEPKN-DPNL-KIEWIFNGKPLELGSRF-KTTADF----GFVTLDLTEVYDRDQ 136 (805)
Q Consensus 65 ~p~~~~~~~~~~~-v~~G~~v~L~C~~~~~~-~p~~-~v~W~k~g~~i~~~~~~-~~~~~~----~~~~L~I~~~~~~D~ 136 (805)
+|.+...++.... +.+|+.++|.|.+.+.. .|.+ .|.|+|++..+...... .....+ ...+|.|.+++.+|+
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 3444444443334 78999999999998431 1655 89999998766532110 001111 234799999999999
Q ss_pred eEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccC
Q psy2166 137 GIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLS 216 (805)
Q Consensus 137 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 216 (805)
|.|+|.+.|..+.......+.. .. ....+|.+...+.... ..
T Consensus 95 g~Y~C~~~~~~~~~~~~~~v~~--~~-----------------------------------~~~~~P~v~v~~~~~~-~~ 136 (239)
T 1i1c_A 95 KTFKCKVNSGAFPAPIEKSISK--PE-----------------------------------GTPRGPQVYTMAPPKE-EM 136 (239)
T ss_dssp CCEEEEEECSSSSSCEEEEECC--CS-----------------------------------SCCBCCEEEEECCCGG-GG
T ss_pred CeEEEEEecccCCCCcEEEEec--CC-----------------------------------CCCcCCEEEEECCChH-Hh
Confidence 9999999998765322222211 00 0114566555444332 23
Q ss_pred CCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEE-EEEcCe----EEEEEcCCCCcccEEEEEEEEcCCee
Q psy2166 217 EGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRT-VHAFGM----VVLEILGTKIEDTGVYTCRATNKWGQ 286 (805)
Q Consensus 217 ~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~-~~~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~g~ 286 (805)
.|+.++|.|.+.. .+|. ..|.|+|+|..+........ ...++. +.|.|.....+|.|.|+|.|.|....
T Consensus 137 ~g~~~~L~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 137 TQSQVSITCMVKG-FYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp GSSEEEEEEEEEE-EBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred cCCcEEEEEEEee-eECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 5889999999853 2444 69999999998854321111 122232 34556555556799999999997643
No 378
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=3.3e-15 Score=129.39 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=83.5
Q ss_pred CCCCCeeeec---CCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEE
Q psy2166 688 DGRPPQFTSE---FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGV 764 (805)
Q Consensus 688 ~~~~P~~~~~---~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 764 (805)
...+|.|... +... .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+. ..++.+....+...|.|.++..+|+|.
T Consensus 18 v~~~P~i~~~~~~~~~~-~v~~G~~~~l~C~~~--g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTY-IRKVGEQLNLVVPFQ--GKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGE 93 (118)
T ss_dssp CSEEEEECCCTTTSSCE-EEESSSCEEEEEEEE--EESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEE
T ss_pred eccCCeEecCcccCCCE-EEECCCEEEEEEEEc--cCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEE
Confidence 3457888653 4555 899999999999999 99999999999999997 567777777777889999999999999
Q ss_pred EEEEEEcCCccEEEEEEEEEEEeC
Q psy2166 765 YTCRATNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 765 Y~C~a~N~~G~~~~~~~l~V~~~~ 788 (805)
|+|.|.|..|..+.++.|.|...|
T Consensus 94 Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 94 YELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEEeCCCeEEEEEEEEEEcCC
Confidence 999999999999999999997543
No 379
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.61 E-value=2e-15 Score=148.79 Aligned_cols=171 Identities=11% Similarity=0.143 Sum_probs=109.9
Q ss_pred ccCCCeEEEEEEEeecC-CCCc-EEEEEECCEEccCCCc-eEEEEe----CcEEEEEEcccCcCCceEEEEEEEeCceee
Q psy2166 316 LKDGDSAHFECTLTPVN-DPEL-KVEWFHNGKPIFHKNR-VKMVSD----FGFVVMDIAYVQSHDSGEYVCRAWNKYGED 388 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~-~p~~-~v~W~~~g~~l~~~~~-~~~~~~----~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~ 388 (805)
+.+|+.++|.|.+.+.. .|.+ .|.|+|++..+..... ...... .....|.|.++..+|+|.|+|.+.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 67899999999998421 2655 8999999866542110 000000 123469999999999999999999988754
Q ss_pred EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCC
Q psy2166 389 FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD 468 (805)
Q Consensus 389 ~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (805)
.....+..
T Consensus 109 ~~~~~v~~------------------------------------------------------------------------ 116 (239)
T 1i1c_A 109 PIEKSISK------------------------------------------------------------------------ 116 (239)
T ss_dssp CEEEEECC------------------------------------------------------------------------
T ss_pred CcEEEEec------------------------------------------------------------------------
Confidence 22222210
Q ss_pred ceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc--eE
Q psy2166 469 LVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR--YR 546 (805)
Q Consensus 469 ~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~--~~ 546 (805)
...+..+|.+.+...... ...|+.++|.|.+.++..+.+.|+|+|||+.+..... +.
T Consensus 117 --------------------~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 175 (239)
T 1i1c_A 117 --------------------PEGTPRGPQVYTMAPPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPT 175 (239)
T ss_dssp --------------------CSSCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCE
T ss_pred --------------------CCCCCcCCEEEEECCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCce
Confidence 012346777776555443 3458899999999963333469999999999854321 11
Q ss_pred EEeeCCE---EEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 547 TFHDFGI---VILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 547 ~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
...++.. +.|.|.....+|.|.|+|.|.|....
T Consensus 176 ~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 176 MDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 1222222 23556554445799999999998644
No 380
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.61 E-value=1e-15 Score=152.49 Aligned_cols=176 Identities=14% Similarity=0.162 Sum_probs=102.1
Q ss_pred CCceecCCCcEEEEEEEecCCCC--CceEEEEECC--Eec-----------------CCCCceEEEec--CcEEEEEEcc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNG--KPL-----------------ELGSRFKTTAD--FGFVTLDLTE 130 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g--~~i-----------------~~~~~~~~~~~--~~~~~L~I~~ 130 (805)
+.+.+.+|+.++|.|.+. +.+ .+.|.|+|.. ..+ ...+|+.+..+ .+..+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp CCEEECTTCEEEEEEEEE--SSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred CCEEEcCCCcEEEEEEec--cccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 357899999999999998 343 5789999853 111 01357777664 4677999999
Q ss_pred cccCCCeEEEEEEEeCCe----------e---EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCC
Q psy2166 131 VYDRDQGIYTCRAWNLAG----------E---TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDS 197 (805)
Q Consensus 131 ~~~~D~G~Y~C~a~n~~g----------~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (805)
++.+|+|.|.|.+.+..| . ....+.|.|...+
T Consensus 86 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~----------------------------------- 130 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS----------------------------------- 130 (257)
T ss_dssp CCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC-----------------------------------
T ss_pred CChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC-----------------------------------
Confidence 999999999999998754 1 1123466665311
Q ss_pred CCCCCCceecccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcc
Q psy2166 198 EDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIED 272 (805)
Q Consensus 198 ~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d 272 (805)
..+|.+....+.. .+.+|+.++|.|.+.. .+|.+ .|.|+++|..+...........++ .+.|.|.+...+|
T Consensus 131 --~~~P~v~~~~p~~-~~~~g~~v~L~C~~~g-~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~ 206 (257)
T 3bn9_D 131 --TKGPSVFPLAPSS-KSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 206 (257)
T ss_dssp --CBCCEECCCCC------------CCCEEEE-EBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC------
T ss_pred --CcCCcEEEecCcc-cccCCCcEEEEEEEee-EECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC
Confidence 1234443322221 2568999999999852 34666 999999987643110000111122 2468888888778
Q ss_pred cEEEEEEEEcCCeeEEEEE
Q psy2166 273 TGVYTCRATNKWGQAEISV 291 (805)
Q Consensus 273 ~G~Y~C~~~n~~g~~~~~~ 291 (805)
|.|+|.|.|.........
T Consensus 207 -g~YtC~v~n~~~~~~~~~ 224 (257)
T 3bn9_D 207 -QTYICNVNHKPSNTKVDK 224 (257)
T ss_dssp --CEEEEEEEGGGTEEEEE
T ss_pred -CeEEEEEEecCCCcCEEE
Confidence 999999999765444333
No 381
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.61 E-value=3.2e-15 Score=144.35 Aligned_cols=170 Identities=17% Similarity=0.211 Sum_probs=103.1
Q ss_pred cCCCeEEEEEEEeecCC--CCcEEEEEECCEEccCCCc-eEEEEeCcEE----EEEEcccCcCCceEEEEEEEeCceeeE
Q psy2166 317 KDGDSAHFECTLTPVND--PELKVEWFHNGKPIFHKNR-VKMVSDFGFV----VMDIAYVQSHDSGEYVCRAWNKYGEDF 389 (805)
Q Consensus 317 ~~g~~~~l~C~~~~~~~--p~~~v~W~~~g~~l~~~~~-~~~~~~~~~~----~l~i~~v~~~d~G~Y~C~a~n~~g~~~ 389 (805)
.+|+.++|.|.+.+... |.+.|.|+|++..+..... ......++.+ .|.|.....+|+|.|+|.|.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 78999999999984211 2459999999987753211 0011111211 234444445569999999999877542
Q ss_pred EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCCCc
Q psy2166 390 TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL 469 (805)
Q Consensus 390 ~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (805)
....+.+
T Consensus 96 ~~~~v~~------------------------------------------------------------------------- 102 (207)
T 1l6x_A 96 IEKTISK------------------------------------------------------------------------- 102 (207)
T ss_dssp EEEEECC-------------------------------------------------------------------------
T ss_pred eEEEecc-------------------------------------------------------------------------
Confidence 2222211
Q ss_pred eEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCc--eEE
Q psy2166 470 VCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHR--YRT 547 (805)
Q Consensus 470 ~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~--~~~ 547 (805)
...+..+|.+....+....+ .|..++|.|.+.+...+.+.|+|+|||..+..... +..
T Consensus 103 -------------------~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~ 162 (207)
T 1l6x_A 103 -------------------AKGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL 162 (207)
T ss_dssp -------------------CCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEE
T ss_pred -------------------CCCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceE
Confidence 00124567766654443323 45569999999963223459999999998864221 111
Q ss_pred EeeCCE---EEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 548 FHDFGI---VILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 548 ~~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
..++.. +.|.|.....+|.|.|+|.|.|....
T Consensus 163 ~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 163 DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp CTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 222222 23566655556899999999997654
No 382
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.60 E-value=2.7e-15 Score=147.33 Aligned_cols=196 Identities=14% Similarity=0.121 Sum_probs=110.7
Q ss_pred CccccCCCCCC------CCcCCCeEEecCCCCce-ecCCCcEEEEEEEecCCC--C-CceEEEEECCEecCCCCce--EE
Q psy2166 50 GKYQRQPSGPE------ETFAKPVFIVPLKPEFK-LGEAQPLHLEAQVEPKND--P-NLKIEWIFNGKPLELGSRF--KT 117 (805)
Q Consensus 50 g~y~c~~~~~~------~~~~~p~~~~~~~~~~~-v~~G~~v~L~C~~~~~~~--p-~~~v~W~k~g~~i~~~~~~--~~ 117 (805)
|.|.|...... ....+|.+.+..+.... +..|+.++|.|.+.+. . | .+.|+|+|||.++...... ..
T Consensus 1 ~~~~~~~~~~~~~c~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~-~p~P~~i~v~W~k~g~~l~~~~~~~~~~ 79 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDV-SHEDPEVKFNWYVDGVEVHNAKTKPREE 79 (240)
T ss_dssp ----------------------CEEEEECCCHHHHHSSSSCCEEEEEEESC-CC--CCCEEEEEETTEEECCCEECCCEE
T ss_pred CceeeeeeecCCCCCccccCCCCEEEEECcChHHhcccCCCcEEEEEEecc-ccCCCccEEEEEECCcccCCceeccceE
Confidence 55666544322 12335655555554555 6679999999999953 3 4 5589999999988543211 11
Q ss_pred EecC---cEEEEEEcccccCCCeEEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCC
Q psy2166 118 TADF---GFVTLDLTEVYDRDQGIYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGV 194 (805)
Q Consensus 118 ~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 194 (805)
..++ ..+.|.|.....+|+|.|+|.|.+..+.......+....
T Consensus 80 ~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~---------------------------------- 125 (240)
T 4acp_A 80 QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK---------------------------------- 125 (240)
T ss_dssp C---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC----------------------------------
T ss_pred CCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC----------------------------------
Confidence 1112 124789998888999999999999865332222222100
Q ss_pred CCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEE-EEcC----eEEEEEcCC
Q psy2166 195 PDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTV-HAFG----MVVLEILGT 268 (805)
Q Consensus 195 ~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~-~~~~----~~~L~i~~~ 268 (805)
....+|.+...+.... ..+|+.++|.|.+... +|. ..+.|+|+|..+......... ..++ .+.|.|...
T Consensus 126 ---~~~~~P~V~v~~~~~~-~~~g~~~~L~C~~~gf-~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~ 200 (240)
T 4acp_A 126 ---GQPREPQVYTLPPSRD-ELTKNQVSLTCLVKGF-YPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKS 200 (240)
T ss_dssp ---SCCBCCEEEEECCCGG-GGGSSEEEEEEEEEEE-BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHH
T ss_pred ---CCCCCCEEEEECCChH-HhcCCceEEEEEEeEE-eCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChH
Confidence 0114566655544432 2358999999999532 444 589999999987532111111 1122 246777666
Q ss_pred CCcccEEEEEEEEcCCe
Q psy2166 269 KIEDTGVYTCRATNKWG 285 (805)
Q Consensus 269 ~~~d~G~Y~C~~~n~~g 285 (805)
..++.|.|+|.|.+...
T Consensus 201 ~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 201 RWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp HHHTTCCEEEEEECTTS
T ss_pred HhCCCCEEEEEEEECCC
Confidence 66789999999998753
No 383
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.60 E-value=4.2e-15 Score=124.58 Aligned_cols=93 Identities=22% Similarity=0.410 Sum_probs=83.8
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEcc--CCCCeEEEeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE--ASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+. ...++.+..+++..+|.|.++..+|+|.|+|
T Consensus 4 ~pP~i~~~~~~~-~~~~G~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (100)
T 3irg_A 4 IPPKIEALPSDI-SIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEEECCCCSEE-EEETTSEEEEEEEEE--EESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCeeecCCCcE-EEcCCCcEEEEEEEE--EcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEE
Confidence 578888888887 999999999999998 89999999999999987 4567777777777899999999999999999
Q ss_pred EEEcCCccEEEEEEEEEE
Q psy2166 768 RATNKWGQAEISVNLECV 785 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~ 785 (805)
.|.|..|..+..+.|.|.
T Consensus 81 ~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 81 SLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcEEEEEEEEEE
Confidence 999999999999999885
No 384
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.60 E-value=5.5e-15 Score=149.26 Aligned_cols=170 Identities=16% Similarity=0.191 Sum_probs=113.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEE--CCEEc------------cCC----CceEEEEe-CcEEEEEEcccCcCCceE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFH--NGKPI------------FHK----NRVKMVSD-FGFVVMDIAYVQSHDSGE 376 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~--~g~~l------------~~~----~~~~~~~~-~~~~~l~i~~v~~~d~G~ 376 (805)
+.+|++++|.|.+. .+.+.+.|+| .+..+ ... .++.+..+ .+...|.|.+++.+|+|.
T Consensus 38 v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 114 (268)
T 3pl6_D 38 TEKGKYVELRCDPI---SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAV 114 (268)
T ss_dssp EETTCCEEEEEBCB---TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEE
T ss_pred ecCCCCEEEEEEeC---CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEE
Confidence 78999999999974 5778999998 22211 111 55665542 345689999999999999
Q ss_pred EEEEEEeC--ceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCce
Q psy2166 377 YVCRAWNK--YGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQS 454 (805)
Q Consensus 377 Y~C~a~n~--~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (805)
|.|.+.|. .+.......|.|.....
T Consensus 115 Y~C~~~~~~~~~~~~~~~~l~V~~~~~----------------------------------------------------- 141 (268)
T 3pl6_D 115 YLCATSALGDTQYFGPGTRLTVLEDLK----------------------------------------------------- 141 (268)
T ss_dssp EEEEEESSSSSCEECCCEEEEEESCGG-----------------------------------------------------
T ss_pred EEEEEecCCCceeeCCcEEEEEecCcc-----------------------------------------------------
Confidence 99999974 22333344566542110
Q ss_pred EEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-EEEEE
Q psy2166 455 AHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-VVEWF 533 (805)
Q Consensus 455 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~v~W~ 533 (805)
...+|.+....+....+.+|+.++|.|.+.+. .|.+ .++|+
T Consensus 142 -------------------------------------~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~-~p~~~~v~W~ 183 (268)
T 3pl6_D 142 -------------------------------------NVFPPEVAVFEPSEAEISHTQKATLVCLATGF-YPDHVELSWW 183 (268)
T ss_dssp -------------------------------------GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE-BSSCEEEEEE
T ss_pred -------------------------------------cccCCceEEeCCCcccccCCCceEEEEEECcc-cCCCeEEEEE
Confidence 12456665544444446779999999999953 3433 99999
Q ss_pred ECCEEccCCCceEE--E------eeCC---EEEEEEccCCCCC-CEEEEEEEEcCCcc
Q psy2166 534 YNGKKLPHGHRYRT--F------HDFG---IVILDILYCYEEN-SGVYECRATNKYGS 579 (805)
Q Consensus 534 ~~g~~l~~~~~~~~--~------~~~~---~~~L~i~~v~~~d-~G~Y~C~a~n~~g~ 579 (805)
|||+.+..+.+... . .++. .+.|.|.....+| +|.|+|.|.|....
T Consensus 184 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 184 VNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp ESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 99998865321110 0 1111 2357888877777 99999999987544
No 385
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.59 E-value=1.1e-15 Score=129.28 Aligned_cols=95 Identities=22% Similarity=0.291 Sum_probs=87.6
Q ss_pred CCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 688 DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 688 ~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
...+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+..+.++.+....+...|.|.++..+|+|.|+|
T Consensus 11 ~~~~~~i~~~p~~~-~v~~G~~v~L~C~~~--g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (106)
T 1nct_A 11 TTLAARILTKPRSM-TVYEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSV 87 (106)
T ss_dssp SSCCCEEEECCCCE-EESSSSCEECCEEEE--CSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEE
T ss_pred CCCCCEEEECCCCE-EEeCCCcEEEEEEEE--EcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEE
Confidence 34789999999998 999999999999998 999999999999999988889888777777899999999999999999
Q ss_pred EEEcCCccEEEEEEEEEE
Q psy2166 768 RATNKWGQAEISVNLECV 785 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~ 785 (805)
.|.|..|..+.++.|.|+
T Consensus 88 ~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 88 VVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CCBCSSCBCCEEEEEEEC
T ss_pred EEEeCCCeEEEEEEEEEE
Confidence 999999999999999884
No 386
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=2.5e-14 Score=141.74 Aligned_cols=181 Identities=11% Similarity=0.146 Sum_probs=115.4
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EE---cc--------------CCCceEEEEeC--cEEEEEEcccCcCCc
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KP---IF--------------HKNRVKMVSDF--GFVVMDIAYVQSHDS 374 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~---l~--------------~~~~~~~~~~~--~~~~l~i~~v~~~d~ 374 (805)
+.+|++++|.|.+.+...+.+.+.|+|+. .. +. ...++.+..+. +...|+|.+++.+|+
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 92 (242)
T 1hxm_B 13 KTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQDI 92 (242)
T ss_dssp EETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGGGC
T ss_pred ecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcccC
Confidence 78999999999997321266889999842 21 10 23566666543 467899999999999
Q ss_pred eEEEEEEEeCce-----e-e-EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeeccee
Q psy2166 375 GEYVCRAWNKYG-----E-D-FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVT 447 (805)
Q Consensus 375 G~Y~C~a~n~~g-----~-~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (805)
|.|.|.+.+... . . .....|.|...+.
T Consensus 93 G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~---------------------------------------------- 126 (242)
T 1hxm_B 93 ATYYCALWEAQQELGKKIKVFGPGTKLIITDKQL---------------------------------------------- 126 (242)
T ss_dssp EEEEEEEEEECSSTTCEEEEECCCEEEEEESSCC----------------------------------------------
T ss_pred EEEEEeeecCCccccccceeEcCcEEEEEccccc----------------------------------------------
Confidence 999999987531 1 1 1234566643210
Q ss_pred eecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC-
Q psy2166 448 QLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP- 526 (805)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p- 526 (805)
....+|...+..+....+.+|+.++|.|.+.+. .|
T Consensus 127 -------------------------------------------~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~-~P~ 162 (242)
T 1hxm_B 127 -------------------------------------------DADVSPKPTIFLPSIAETKLQKAGTYLCLLEKF-FPD 162 (242)
T ss_dssp -------------------------------------------CSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEE-SSC
T ss_pred -------------------------------------------CCCcCCCceEECCChhhcccCCCceEEEEEeeE-ECC
Confidence 000123322222222336789999999999953 35
Q ss_pred CcEEEEEECCE-EccCCCc-eEEEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 527 DLVVEWFYNGK-KLPHGHR-YRTFHDFG---IVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 527 ~~~v~W~~~g~-~l~~~~~-~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
.+.|+|+++|. .+..... .....++. .+.|.|..+.. | |.|+|.|.|..+.......|.+
T Consensus 163 ~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 163 VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 48999999987 5643210 01112222 24688887664 4 9999999999988755555544
No 387
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.59 E-value=8.2e-15 Score=125.16 Aligned_cols=94 Identities=20% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeC-------cEEEEEEcCCCCCCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF-------GMVVLEILGTKIEDT 762 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~-------~~~~L~i~~v~~~d~ 762 (805)
.||+|. +. ....+..+.|.|.+. |+|.|.|+|+|||++|..+.++.+.... ...+|+|.++...|+
T Consensus 3 ~pP~I~--l~---~~~~~~~~~l~c~v~--G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 75 (126)
T 1he7_A 3 MPASVQ--LH---TAVEMHHWCIPFSVD--GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN 75 (126)
T ss_dssp CCCCCC--CC---CCCCCCEEEEEEEEC--CSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGC
T ss_pred CCCEEE--cc---CCccCccEEEEEEEe--eeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCC
Confidence 467762 22 234678999999999 9999999999999999988776543221 245799999999999
Q ss_pred EEEEEEEEcCCccEEEEEEEEEEEeCCC
Q psy2166 763 GVYTCRATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 763 G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
|.|+|+|.|.+|.++.++.|.|...|-+
T Consensus 76 G~YtC~A~N~~G~~~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 76 GNYTLLAANPFGQASASIMAAFMDNPFE 103 (126)
T ss_dssp EEEEEEEEETTEEEEEEEEECCCSCTTS
T ss_pred EEEEEEEEECCCeEEEEEEEEEEcCCCC
Confidence 9999999999999999999999765543
No 388
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.59 E-value=9.3e-15 Score=123.15 Aligned_cols=98 Identities=24% Similarity=0.464 Sum_probs=87.8
Q ss_pred CCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEE
Q psy2166 491 PVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYE 570 (805)
Q Consensus 491 ~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 570 (805)
.+..+|.|...+.+.. +.+|+.++|.|.+. |.|.|.++|+|+|..+..+.++.+..+++...|.|.++..+|+|.|+
T Consensus 4 ~~~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 80 (103)
T 3qp3_A 4 TLDHAPRITLRMRSHR-VPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYR 80 (103)
T ss_dssp TTCEEEEEEECCCCEE-EETTCCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred CCCCCCEEEeCCcceE-EeCCCeEEEEEEEE--ecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEE
Confidence 4567888888776655 89999999999999 67888999999999999888888888888889999999999999999
Q ss_pred EEEEcCCcceEEEEEEEEeee
Q psy2166 571 CRATNKYGSDVTKASLKCVSK 591 (805)
Q Consensus 571 C~a~n~~g~~~~~~~l~V~~~ 591 (805)
|.|.|..|.....+.|.|...
T Consensus 81 C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 81 AVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEEEETTEEEEEEEEEEEECC
T ss_pred EEEEeCCCcEEEEEEEEEECC
Confidence 999999999999999998754
No 389
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.59 E-value=1.5e-15 Score=121.27 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=70.5
Q ss_pred CcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEEE
Q psy2166 699 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI 778 (805)
Q Consensus 699 ~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 778 (805)
.++ .+.+|+.+.|.|.+. | |.|.|+|+|||++|..+.++.+..+++...|.|.+++.+|+|.|+|.|.| ++.
T Consensus 4 t~v-~~~~G~~v~l~C~vs--~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~ 75 (84)
T 2lu7_A 4 TRV-RSTPGGDLELVVHLS--G-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSR 75 (84)
T ss_dssp CCE-EECTTSCEEEECCCS--C-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCE
T ss_pred eEE-EEecCCCEEEEEEEC--C-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEE
Confidence 344 899999999999986 6 88899999999999999999998888888999999999999999999855 567
Q ss_pred EEEEEEE
Q psy2166 779 SVNLECV 785 (805)
Q Consensus 779 ~~~l~V~ 785 (805)
++.|+|+
T Consensus 76 ~a~l~V~ 82 (84)
T 2lu7_A 76 IFLVSVE 82 (84)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 7888885
No 390
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.3e-15 Score=130.21 Aligned_cols=100 Identities=27% Similarity=0.440 Sum_probs=87.1
Q ss_pred CCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEE-EeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 689 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-VHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 689 ~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
..+|.|...+.+. .+.+|+.++|.|.+. |.|.|.|.|+|+|..+....+..+ ....+...|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm3_A 7 GFRPHFLQAPGDL-TVQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTC 83 (110)
T ss_dssp CCCCEEEECCCEE-EEESSSCBCCEEEEE--CSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCE
T ss_pred CCCCcEEeCCCcE-EEeCCCEEEEEEEEE--EcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEE
Confidence 4689999999988 999999999999999 999999999999999887766544 334456789999999999999999
Q ss_pred EEEcCCccEEEEEEEEEEEeCCCc
Q psy2166 768 RATNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
.|.|..|..+.++.|.|...+.++
T Consensus 84 ~a~n~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 84 IATNRAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp EEECSSCEEEECCEEEEECCCCSS
T ss_pred EEECCCCEEEEEEEEEEeCCCCCC
Confidence 999999999999999998765543
No 391
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.59 E-value=3.5e-14 Score=144.13 Aligned_cols=172 Identities=16% Similarity=0.230 Sum_probs=116.5
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EEc-------------c----CCCceEEEEe-CcEEEEEEcccCcCCce
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KPI-------------F----HKNRVKMVSD-FGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~l-------------~----~~~~~~~~~~-~~~~~l~i~~v~~~d~G 375 (805)
+.+|++++|.|.+. +.+.+.+.|+|++ ... . ...++.+..+ .....|.|.+++.+|+|
T Consensus 36 v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 113 (279)
T 2wbj_D 36 SKSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSS 113 (279)
T ss_dssp EETTSCEEEEEEES--SSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCE
T ss_pred ecCCCeEEEEEEeC--CCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCE
Confidence 88999999999996 7788899999853 111 0 1346666553 45678999999999999
Q ss_pred EEEEEEEeCce------eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeee
Q psy2166 376 EYVCRAWNKYG------EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQL 449 (805)
Q Consensus 376 ~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (805)
.|.|.+.|..+ .....+.|.|....
T Consensus 114 ~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~------------------------------------------------- 144 (279)
T 2wbj_D 114 FYICSARDLTSGANNEQFFGPGTRLTVTEDL------------------------------------------------- 144 (279)
T ss_dssp EEEEEEEETTCBTSCCEEECCCEEEEEESCG-------------------------------------------------
T ss_pred EEEEEEcccccCCccceeeCCCEEEEEecCC-------------------------------------------------
Confidence 99999998432 11122455554211
Q ss_pred cCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC-Cc
Q psy2166 450 KEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP-DL 528 (805)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p-~~ 528 (805)
....+|.+....+....+.+|+.++|.|.+.+. .| .+
T Consensus 145 -----------------------------------------~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~-~P~~~ 182 (279)
T 2wbj_D 145 -----------------------------------------KNVFPPEVAVFEPSEAEISHTQKATLVCLATGF-YPDHV 182 (279)
T ss_dssp -----------------------------------------GGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEE-BSSCE
T ss_pred -----------------------------------------CCCCCCEEEEECCCcccccCCCceEEEEEEeeE-cCCCc
Confidence 012467666554443336689999999999953 34 47
Q ss_pred EEEEEECCEEccCCCceE---EE-----eeCC---EEEEEEccCCCCC-CEEEEEEEEcCCcce
Q psy2166 529 VVEWFYNGKKLPHGHRYR---TF-----HDFG---IVILDILYCYEEN-SGVYECRATNKYGSD 580 (805)
Q Consensus 529 ~v~W~~~g~~l~~~~~~~---~~-----~~~~---~~~L~i~~v~~~d-~G~Y~C~a~n~~g~~ 580 (805)
.|+|+|||+++..+.... .. .++. .+.|.|.....+| .|.|+|.|.|.....
T Consensus 183 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~~ 246 (279)
T 2wbj_D 183 ELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 246 (279)
T ss_dssp EEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBCT
T ss_pred EEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCCC
Confidence 999999999986542211 00 1122 2358888777765 678999999976543
No 392
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.58 E-value=4.1e-15 Score=127.70 Aligned_cols=93 Identities=23% Similarity=0.292 Sum_probs=83.2
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+.+.|.|.+. +. |.++|+|+|..+..+.++.+..+++...|.|.+++.+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~-~v~~G~~v~l~C~~~--~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 18 LPIKFTEGLRNE-EATEGATAVLRCELS--KM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp SCCCEEECCCCC-EECTTSCEEEEEEES--SC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE
T ss_pred CCCcccccCCce-EEeCCCeEEEEEEEC--CC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe
Confidence 567898888888 999999999999997 65 6899999999999999999988888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeCCCc
Q psy2166 770 TNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
|....++.|.|...|..+
T Consensus 93 ----~~~~~~~~l~V~~~p~~~ 110 (113)
T 2edh_A 93 ----GKERTSAMLTVRAMPSGP 110 (113)
T ss_dssp ----TTEEEEEEEEECCCCCSS
T ss_pred ----CCCCEEEEEEEeCCCCCc
Confidence 889999999997765543
No 393
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.58 E-value=2.6e-15 Score=150.05 Aligned_cols=174 Identities=12% Similarity=0.037 Sum_probs=113.0
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEec------C---------CCC-ceEEEecCcEEEEEEccccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKPL------E---------LGS-RFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~i------~---------~~~-~~~~~~~~~~~~L~I~~~~~ 133 (805)
.+..+.+.+|+.++|.|.+. +.+.+.|.|+|. +... . ..+ |+.+..++... |.|.+++.
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~ 83 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILK--NSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANM 83 (253)
T ss_dssp ECSEEEEESSCCEEEEEECS--CTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESC
T ss_pred CCCeEEEeCCCcEEEEEEeC--CCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCCh
Confidence 34467899999999999987 577789999982 2110 0 012 66666554433 99999999
Q ss_pred CCCeEEEEEEEeCCe------eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 134 RDQGIYTCRAWNLAG------ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
+|+|.|+|.+.+..+ .....+.|.|..... ...+|.+..
T Consensus 84 ~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~-----------------------------------~~~~P~v~~ 128 (253)
T 3to4_D 84 SQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLK-----------------------------------NVFPPEVAV 128 (253)
T ss_dssp SSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCST-----------------------------------TCBCCEEEE
T ss_pred hhCeEEEEEEecCCCCcccceEECCCEEEEEecCCC-----------------------------------CCCCCeEEE
Confidence 999999999987543 112234566653210 013455544
Q ss_pred ccccccccCCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEE-------EcC----eEEEEEcCCCCcc-cE
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQTM-TVEFLYNGKPIEASHRIRTVH-------AFG----MVVLEILGTKIED-TG 274 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p~~-~i~W~k~g~~l~~~~~~~~~~-------~~~----~~~L~i~~~~~~d-~G 274 (805)
..+....+.+|+.++|.|.+.. .+|.+ .+.|+|+|..+.......... .++ .+.|.|.....+| .|
T Consensus 129 ~~~~~~~~~~g~~~~L~C~~~g-~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~ 207 (253)
T 3to4_D 129 FEPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRN 207 (253)
T ss_dssp EECCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTC
T ss_pred eCCChhhcccCCceEEEEEEce-EECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCC
Confidence 3333323456789999999853 24554 999999999986532211000 122 2468888777777 77
Q ss_pred EEEEEEEcCC
Q psy2166 275 VYTCRATNKW 284 (805)
Q Consensus 275 ~Y~C~~~n~~ 284 (805)
.|+|.|.|..
T Consensus 208 ~ytC~v~h~~ 217 (253)
T 3to4_D 208 HFRCQVQFYG 217 (253)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEeCC
Confidence 9999999864
No 394
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=3.7e-15 Score=124.79 Aligned_cols=91 Identities=26% Similarity=0.369 Sum_probs=79.7
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccC-CCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA-SHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.|.|+|+|..+.. ..++.+. ..+ .|.|.+++.+|+|.|+|.
T Consensus 7 ~~P~i~~~p~~~-~v~~G~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~-~~~--~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 7 GPPIILQGPANQ-TLAVDGTALLKCKAT--GDPLPVISWLKEGFTFPGRDPRATIQ-EQG--TLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp SSCEEEECCCCE-EEESSSEEEECCEEE--CSSCCEEEEEESSSEESSSCSSCEEC-TTC--CEEEESCCTTTCCEEEEE
T ss_pred CCCEEEeCcCCE-EEcCCCcEEEEEEEE--EcCCCEEEEEECCEECCCCCCCEEEc-CCC--EEEEccCCcccCEEEEEE
Confidence 689999999888 999999999999999 999999999999988874 3444433 333 699999999999999999
Q ss_pred EEcCCccEEEEEEEEEEE
Q psy2166 769 ATNKWGQAEISVNLECVV 786 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~ 786 (805)
|.|..|....++.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp EECSSCCCBCCEEEEEES
T ss_pred EEcCCCCEEEEEEEEEec
Confidence 999999999999999864
No 395
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.57 E-value=2.4e-15 Score=128.13 Aligned_cols=95 Identities=19% Similarity=0.252 Sum_probs=73.8
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. |.|.|.+.|+|+|..+....++.+....+ .|.|.++..+|+|.|+|.|
T Consensus 9 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~a 83 (108)
T 3kvq_A 9 VAPTITGNLENQ-TTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQA 83 (108)
T ss_dssp --CCCBSCCCCE-EEETTCCEEEECBCC------CCEEEEESSSBCCCBTTEEEETTTT--EEEECSCCGGGCEEEEEEE
T ss_pred CCCceecCCCCe-EEeCCCeEEEEEECc--CcCCCeEEEEECCeEcccCCCeEEeCCCc--EEEEeecCcccCEEEEEEE
Confidence 578888888888 999999999999998 99999999999999998887776554444 7999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeCC
Q psy2166 770 TNKWGQAEISVNLECVVWSP 789 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~~ 789 (805)
.|..|....++.|.|...+.
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 84 CSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp C----CEEEEEEEEEEC---
T ss_pred EeCCCceEEEEEEEEeCCCc
Confidence 99999999999999976543
No 396
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.57 E-value=1.4e-14 Score=143.30 Aligned_cols=183 Identities=17% Similarity=0.190 Sum_probs=114.7
Q ss_pred CCCceecCCCcEEEEEEEecCCCC--CceEEEEEC--CE---ec---C----------------CCCceEEEec--CcEE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFN--GK---PL---E----------------LGSRFKTTAD--FGFV 124 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~--g~---~i---~----------------~~~~~~~~~~--~~~~ 124 (805)
+..+.+.+|++|+|.|.+.+...+ ...+.|+|. +. .+ . ..+|+.+..+ .+.+
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 346789999999999999842222 458999983 21 11 1 1246766653 4677
Q ss_pred EEEEcccccCCCeEEEEEEEeCCe-----------e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCC
Q psy2166 125 TLDLTEVYDRDQGIYTCRAWNLAG-----------E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQP 191 (805)
Q Consensus 125 ~L~I~~~~~~D~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 191 (805)
+|.|.+++.+|+|.|.|.+.+..+ . ......|.|....
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~----------------------------- 137 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSAS----------------------------- 137 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCC-----------------------------
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCC-----------------------------
Confidence 899999999999999999986521 1 1122345553211
Q ss_pred CCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcC
Q psy2166 192 AGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILG 267 (805)
Q Consensus 192 ~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~ 267 (805)
..+|.+....+.. .+.+|+.++|.|.+.....+...+.|+++|..+...........++ .+.|.|..
T Consensus 138 --------~~~P~v~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~ 208 (239)
T 3tv3_H 138 --------TKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS 208 (239)
T ss_dssp --------CBCCEEEEECCCC-CC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEG
T ss_pred --------CcCCEEEEECCCh-hhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEch
Confidence 1345554333332 2557999999999853222345689999987542111000111111 24688988
Q ss_pred CCCcccEEEEEEEEcCCeeEEEEEEEE
Q psy2166 268 TKIEDTGVYTCRATNKWGQAEISVNLE 294 (805)
Q Consensus 268 ~~~~d~G~Y~C~~~n~~g~~~~~~~l~ 294 (805)
...+| |.|+|.|.|..+.......+.
T Consensus 209 ~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 209 SSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp GGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred hhcCC-CEEEEEEEECCCCceEEEEec
Confidence 88888 999999999877666555544
No 397
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.57 E-value=1.9e-14 Score=139.80 Aligned_cols=173 Identities=13% Similarity=0.167 Sum_probs=110.2
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EEcc----------------CCCceEEEEe--CcEEEEEEcccCcCCce
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KPIF----------------HKNRVKMVSD--FGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~l~----------------~~~~~~~~~~--~~~~~l~i~~v~~~d~G 375 (805)
+.+|++++|.|.+.+...+.+.+.|+|+. ..+. ...++.+..+ .+...|+|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 91 (215)
T 1c5d_H 12 VQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTEDTA 91 (215)
T ss_dssp ECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGGCE
T ss_pred ecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcccCE
Confidence 78999999999997311235789999852 2110 1246666553 34678999999999999
Q ss_pred EEEEEEEeCcee---eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 376 EYVCRAWNKYGE---DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 376 ~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
.|.|.+.|..+. ....+.|.|...
T Consensus 92 ~Y~C~~~~~~~~~~~~~~~~~L~V~~~----------------------------------------------------- 118 (215)
T 1c5d_H 92 IYFCTREDGWNYFDYWGPGTMVTVSSA----------------------------------------------------- 118 (215)
T ss_dssp EEEEEECCSSSCSCCBCCCEEEEECSS-----------------------------------------------------
T ss_pred EEEEEEecCCcccceEcCCEEEEecCC-----------------------------------------------------
Confidence 999999886421 112345655311
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-EEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-VVE 531 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~v~ 531 (805)
...+|.+....+... +.+|+.++|.|.+.+ ..|.+ .|+
T Consensus 119 ---------------------------------------~~~~P~i~~~~~~~~-~~~g~~v~L~C~~~g-~~P~p~~v~ 157 (215)
T 1c5d_H 119 ---------------------------------------QTTAPSVYPLAPGCG-DTTSSTVTLGCLVKG-YFPEPVTVT 157 (215)
T ss_dssp ---------------------------------------CCBCCCEEEECCCSS-CCCCSSEEEEEEEEE-EBSSCCEEE
T ss_pred ---------------------------------------CCCCCeEEeccCChh-hccCCcEEEEEEEee-eEcCCcEEE
Confidence 123566655443333 678999999999995 23666 999
Q ss_pred EEECCEEccCCCceEEEeeCCEEEE--EEccCCCCCCEEEEEEEEcCCcceEEEE
Q psy2166 532 WFYNGKKLPHGHRYRTFHDFGIVIL--DILYCYEENSGVYECRATNKYGSDVTKA 584 (805)
Q Consensus 532 W~~~g~~l~~~~~~~~~~~~~~~~L--~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 584 (805)
|+++|..+..........+ +...+ .|.....+| |.|+|.|.|..|......
T Consensus 158 W~~~g~~~~~~~~~~~~~~-g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 158 WNSGALSSDVHTFPAVLQS-GLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDK 210 (215)
T ss_dssp EGGGTTCCSCCBCCCEEET-TEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EccCCccCceEecCcccCC-CCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEE
Confidence 9999876532111111122 32221 223344456 999999999988765443
No 398
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.3e-15 Score=128.74 Aligned_cols=100 Identities=18% Similarity=0.152 Sum_probs=79.1
Q ss_pred CCeeeecCCcccccCCCCeEEEEEEEeecCC---CCeEEEEEECCEE-cc--CCCCeEEEe--eC----cEEEEEEcCCC
Q psy2166 691 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGD---QTMTVEFLYNGKP-IE--ASHRIRTVH--AF----GMVVLEILGTK 758 (805)
Q Consensus 691 ~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~---p~~~v~W~~~g~~-l~--~~~~~~~~~--~~----~~~~L~i~~v~ 758 (805)
-|.|...|.+. .+.+|+.++|.|.+. |. |.|.|+|||++.. +. ...++.+.. +. ....|+|.+++
T Consensus 7 ~~~F~~~P~~v-~V~eG~~v~L~C~v~--g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 83 (126)
T 2dav_A 7 GILFIEKPQGG-TVKVGEDITFIAKVK--AEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAK 83 (126)
T ss_dssp SCSCCSCCCCC-EEETTCCEEEEEEEE--CCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCC
T ss_pred ccEEEEcCCCe-EEeCCCCEEEEEEEe--ccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCC
Confidence 36788888888 999999999999998 64 8999999997521 11 234555421 11 24689999999
Q ss_pred CCCCEEEEEEEEcCCccEEEEEEEEEEEeCCCcce
Q psy2166 759 IEDTGVYTCRATNKWGQAEISVNLECVVWSPSQTK 793 (805)
Q Consensus 759 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~~~ 793 (805)
.+|+|.|+|+|.|..|.++.++.|+|++.++..+.
T Consensus 84 ~~DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~ 118 (126)
T 2dav_A 84 DNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPN 118 (126)
T ss_dssp TTSCEEEEEEEECSSCEEEECCEEEEECCCCSCCC
T ss_pred cccCEEEEEEEEeCCCcEEEEEEEEEEecCCCCCe
Confidence 99999999999999999999999999985554333
No 399
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.56 E-value=6.3e-15 Score=147.96 Aligned_cols=175 Identities=16% Similarity=0.193 Sum_probs=104.4
Q ss_pred ceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc---C-C-------------CcEEEE--EEcCeEE
Q psy2166 204 QFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN--GKPIE---A-S-------------HRIRTV--HAFGMVV 262 (805)
Q Consensus 204 ~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~--g~~l~---~-~-------------~~~~~~--~~~~~~~ 262 (805)
.+...+... .+.+|++++|.|.+ .+.+.+.+.|||. +.... . . .+.... ...+...
T Consensus 4 ~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 80 (259)
T 3omz_A 4 NLEGRTKSV-IRQTGSSAEITCDL--AEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLR 80 (259)
T ss_dssp -------CE-EEETTCCEEEECCC-------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCE
T ss_pred ccccCCcee-EecCCCcEEEEEEE--ccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEE
Confidence 333333333 47899999999988 5667789999982 21110 0 0 011111 1223457
Q ss_pred EEEcCCCCcccEEEEEEEEcCCe---eEEEEEEEEEeccCCCC------------CCeEEecCCCcccccCCCeEEEEEE
Q psy2166 263 LEILGTKIEDTGVYTCRATNKWG---QAEISVNLECVDKSKGQ------------PPKFTSHIKSLEGLKDGDSAHFECT 327 (805)
Q Consensus 263 L~i~~~~~~d~G~Y~C~~~n~~g---~~~~~~~l~v~~~~~~~------------~p~~~~~~~~~~~~~~g~~~~l~C~ 327 (805)
|.|.+++.+|+|.|.|.+.+..+ .......|.|....... .+.+...+... .+.+|++++|.|.
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~-~v~~G~~v~L~C~ 159 (259)
T 3omz_A 81 MILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSV-SMPVRKAVTLNCL 159 (259)
T ss_dssp EEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCE-EEETTCCEEECCE
T ss_pred EEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEE-EEcCCCCEEEEEE
Confidence 99999999999999999998765 33344556665432111 23444444433 3889999999998
Q ss_pred EeecCCCCcEEEEEECC--EEcc------------CCCceEEEE--eCcEEEEEEcccCcCCceEEEEEEEe
Q psy2166 328 LTPVNDPELKVEWFHNG--KPIF------------HKNRVKMVS--DFGFVVMDIAYVQSHDSGEYVCRAWN 383 (805)
Q Consensus 328 ~~~~~~p~~~v~W~~~g--~~l~------------~~~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~a~n 383 (805)
+.+ ..+.+.+.|+|++ ..+. ...++.+.. ......|+|.+++.+|+|.|.|.+.+
T Consensus 160 ~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 160 YET-SWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp EEC-CCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred CCC-ccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 872 3478899999843 1110 123444331 12345699999999999999999985
No 400
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.56 E-value=1.2e-14 Score=120.25 Aligned_cols=87 Identities=20% Similarity=0.360 Sum_probs=78.2
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.| |.|.|+|+|..+..+.++.+. ++ .|.|.+++.+|+|.|+|.|
T Consensus 8 ~pp~~~~~~~~~-~v~~G~~v~l~C~~~--g~p-p~i~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a 79 (95)
T 2ckn_A 8 QPWGVPVEVESL-LVHPGDLLQLRCRLR--DDV-QSINWLRDGVQLVESNRTRIT--GE--EVEVRDSIPADSGLYACVT 79 (95)
T ss_dssp CSCCBTTBBCCE-EECTTSCEEEECCEE--SSC-CEEEEEBTTBCCCCCSSEEEC--SS--EEEESSCCGGGSEEEEEEE
T ss_pred CCCEEEcCcceE-EEcCCCeEEEEEECC--CCC-CceEEEECCEecCCCCCEEEe--CC--EEEECCCChHHCEEEEEEe
Confidence 678888888888 999999999999999 888 799999999999888776643 33 7999999999999999999
Q ss_pred EcCCccEEEEEEEEE
Q psy2166 770 TNKWGQAEISVNLEC 784 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V 784 (805)
.|..|..+.++.|.|
T Consensus 80 ~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 80 SSPSGSDTTYFSVNV 94 (95)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEE
Confidence 999999999998887
No 401
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.56 E-value=8e-15 Score=145.95 Aligned_cols=169 Identities=13% Similarity=0.197 Sum_probs=97.9
Q ss_pred ccCCCeEEEEEEEeecCCC--CcEEEEEECC--EE---c--------------cCCCceEEEEe--CcEEEEEEcccCcC
Q psy2166 316 LKDGDSAHFECTLTPVNDP--ELKVEWFHNG--KP---I--------------FHKNRVKMVSD--FGFVVMDIAYVQSH 372 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p--~~~v~W~~~g--~~---l--------------~~~~~~~~~~~--~~~~~l~i~~v~~~ 372 (805)
+.+|++++|.|.+. +.+ .+.+.|+|.. .. + ....++.+..+ .+...|.|.+++.+
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (257)
T 3bn9_D 12 VKPGGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE 89 (257)
T ss_dssp ECTTCEEEEEEEEE--SSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred EcCCCcEEEEEEec--cccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 78999999999997 544 5789999853 11 1 01346666654 45678999999999
Q ss_pred CceEEEEEEEeCcee---------e--E--EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCce
Q psy2166 373 DSGEYVCRAWNKYGE---------D--F--TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKF 439 (805)
Q Consensus 373 d~G~Y~C~a~n~~g~---------~--~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (805)
|+|.|.|.+.+..|. . . ..+.|.|...
T Consensus 90 DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~---------------------------------------- 129 (257)
T 3bn9_D 90 DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA---------------------------------------- 129 (257)
T ss_dssp GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS----------------------------------------
T ss_pred hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC----------------------------------------
Confidence 999999999987641 1 1 2245555321
Q ss_pred eeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEE
Q psy2166 440 ITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEAR 519 (805)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~ 519 (805)
...+|.+....+... +.+|+.++|.|.
T Consensus 130 ----------------------------------------------------~~~~P~v~~~~p~~~-~~~g~~v~L~C~ 156 (257)
T 3bn9_D 130 ----------------------------------------------------STKGPSVFPLAPSSK-STSGGTAALGCL 156 (257)
T ss_dssp ----------------------------------------------------CCBCCEECCCCC------------CCCE
T ss_pred ----------------------------------------------------CCcCCcEEEecCccc-ccCCCcEEEEEE
Confidence 023455544333222 578999999999
Q ss_pred EeeCCCCCc-EEEEEECCEEccCCCceEEEeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceE
Q psy2166 520 LTPVTDPDL-VVEWFYNGKKLPHGHRYRTFHDFG----IVILDILYCYEENSGVYECRATNKYGSDV 581 (805)
Q Consensus 520 v~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 581 (805)
+.+ ..|.+ .|+|+++|..+.......+...++ .+.|.|..+..+| |.|+|.|.|......
T Consensus 157 ~~g-~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 157 VKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp EEE-EBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred Eee-EECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 995 24655 999999998643210000111122 2358888887778 999999999755433
No 402
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=2.5e-14 Score=122.99 Aligned_cols=98 Identities=21% Similarity=0.342 Sum_probs=86.4
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
..+|.|...+.... +.+|+.++|.|.+. |.|.+.++|+|+|..+..+.++.+........|.|.+++.+|+|.|+|.
T Consensus 5 ~~pp~i~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (114)
T 2cqv_A 5 SSGPQIIQFPEDQK-VRAGESVELFGKVT--GTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLL 81 (114)
T ss_dssp CCCCEESCCCCSEE-EETTCCEEEEEEEE--SSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEE
T ss_pred CCCCEEEeCCCCeE-EeCCCeEEEEEEEE--cCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEE
Confidence 46777776655554 89999999999999 7899999999999999888888887777778899999999999999999
Q ss_pred EEcCCcceEEEEEEEEeeeee
Q psy2166 573 ATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~ 593 (805)
|.|..|.....+.|.|...+.
T Consensus 82 a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 82 VENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp EECSSCEEECCEEEEEECSCS
T ss_pred EEECCCcEEEEEEEEEECCCC
Confidence 999999999999999987665
No 403
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.56 E-value=1.3e-14 Score=142.89 Aligned_cols=183 Identities=16% Similarity=0.168 Sum_probs=113.0
Q ss_pred CCceecCCCcEEEEEEEecC--CCCCceEEEEECC--E---ec-----C-----------CCCceEEEec--CcEEEEEE
Q psy2166 74 PEFKLGEAQPLHLEAQVEPK--NDPNLKIEWIFNG--K---PL-----E-----------LGSRFKTTAD--FGFVTLDL 128 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~--~~p~~~v~W~k~g--~---~i-----~-----------~~~~~~~~~~--~~~~~L~I 128 (805)
+.+.+.+|++|+|.|.+.+. +.+...|.|+|.. . .+ . ..+|+.+..+ .+.++|.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 87 (232)
T 3qhz_H 8 GPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTM 87 (232)
T ss_dssp CCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEE
T ss_pred CCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEE
Confidence 35789999999999999732 1233445999831 1 11 0 1247777654 36788999
Q ss_pred cccccCCCeEEEEEEEeCC--------eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCC
Q psy2166 129 TEVYDRDQGIYTCRAWNLA--------GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDG 200 (805)
Q Consensus 129 ~~~~~~D~G~Y~C~a~n~~--------g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (805)
.+++.+|+|.|.|.+.+.. ........|.|.... .
T Consensus 88 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~ 130 (232)
T 3qhz_H 88 TNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS-------------------------------------T 130 (232)
T ss_dssp CSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC-------------------------------------C
T ss_pred CcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC-------------------------------------C
Confidence 9999999999999998763 112223456654211 1
Q ss_pred CCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEEE
Q psy2166 201 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVY 276 (805)
Q Consensus 201 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y 276 (805)
.+|.+....+.. .+.+|+.++|.|.+.....+...+.|+++|..+...........++ .+.|.|.....+| |.|
T Consensus 131 ~~P~v~~~~~~~-~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~y 208 (232)
T 3qhz_H 131 KGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 208 (232)
T ss_dssp BCCEEEEECC--------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCC
T ss_pred CCCEEEEecccc-cccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEE
Confidence 345554322222 2567999999999853233356789999986442111000111111 2468898888888 999
Q ss_pred EEEEEcCCeeEEEEEEEEE
Q psy2166 277 TCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 277 ~C~~~n~~g~~~~~~~l~v 295 (805)
+|.|.|..+.......+.+
T Consensus 209 tC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 209 ICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEEEEGGGTEEEEEECCC
T ss_pred EEEEEeCCCCccEEEEeCC
Confidence 9999998877766665543
No 404
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=6e-15 Score=127.79 Aligned_cols=94 Identities=24% Similarity=0.346 Sum_probs=82.3
Q ss_pred CCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccC-CCCeEEEeeCcEEEEEEcCCCCCCCEEEEE
Q psy2166 689 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA-SHRIRTVHAFGMVVLEILGTKIEDTGVYTC 767 (805)
Q Consensus 689 ~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 767 (805)
..||.|...+.+. .+.+|+.+.|.|.+. |.|.+.|.|+|+|..+.. ..++.+.. .+ .|.|.+++.+|+|.|+|
T Consensus 6 ~~pP~i~~~p~~~-~v~~G~~v~l~C~~~--g~p~p~i~W~k~g~~~~~~~~~~~~~~-~~--~L~i~~v~~~D~G~Y~C 79 (118)
T 2eo9_A 6 SGPPVIRQGPVNQ-TVAVDGTFVLSCVAT--GSPVPTILWRKDGVLVSTQDSRIKQLE-NG--VLQIRYAKLGDTGRYTC 79 (118)
T ss_dssp CCSCCCSBCCCCE-EEETTCEEEEECBCC--CSSCCEEEEEESSSBCCTTSTTEEEEE-TT--EEEEESCCGGGCCCEEE
T ss_pred CCCCEEEcCCCCE-EEcCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCCCeEEEcc-CC--EEEEccCCcCCCEEEEE
Confidence 4689999888888 999999999999998 999999999999998875 45555443 44 69999999999999999
Q ss_pred EEEcCCccEEEEEEEEEEEeC
Q psy2166 768 RATNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 768 ~a~N~~G~~~~~~~l~V~~~~ 788 (805)
.|.|..|....++.|.|...+
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 80 IASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp EEECSSCEEEEECCEEEECCS
T ss_pred EEEcCCCcEEEEEEEEEEeCC
Confidence 999999999999999997654
No 405
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.56 E-value=1.7e-14 Score=163.48 Aligned_cols=168 Identities=17% Similarity=0.217 Sum_probs=118.7
Q ss_pred CCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecC------------CCCceEEEecCcEEEEEEcccccCCCeEEE
Q psy2166 73 KPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLE------------LGSRFKTTADFGFVTLDLTEVYDRDQGIYT 140 (805)
Q Consensus 73 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~------------~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 140 (805)
...+.+.+|++++|.|.+.. +.|.+.|+|+|++..+. ...|+.+..++ +|.|.+++.+|+|.|+
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~ 448 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAP-KKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFR 448 (581)
T ss_dssp CEEEEEETTSCEEECCTTCC-SSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEE
T ss_pred hcccceecCCcEEEeeeecC-CCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEE
Confidence 34578899999999999832 58888999999876321 12355555444 7999999999999999
Q ss_pred EEEEeCCeeE-EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCCCc
Q psy2166 141 CRAWNLAGET-FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGE 219 (805)
Q Consensus 141 C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~ 219 (805)
|.+.|..|.. .....|.|..++ .+|.+...... ....+.
T Consensus 449 C~~~n~~~~~~~~~~~l~V~~~~--------------------------------------~~p~i~~~~~~--~~~~~~ 488 (581)
T 3o3u_N 449 CQAMNRNGKETKSNYRVRVYQIP--------------------------------------GKPEIVDSASE--LTAGVP 488 (581)
T ss_dssp EEEECTTSCEEEEEEEEEEEBCC--------------------------------------CCCEEESCCSE--ECTTSC
T ss_pred EEEEcCCCceeEEEEEEEEEcCC--------------------------------------CCCEEEcCCcc--cccCCc
Confidence 9999998876 667788886543 22444333222 133344
Q ss_pred eEEEEEEEeeCCCCCeEEEEEECCEEccCCC-cEEEEE------EcC----eEEEEEcCCC-CcccEEEEEEEEcCCe
Q psy2166 220 IAHFEASLIPVGDQTMTVEFLYNGKPIEASH-RIRTVH------AFG----MVVLEILGTK-IEDTGVYTCRATNKWG 285 (805)
Q Consensus 220 ~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~-~~~~~~------~~~----~~~L~i~~~~-~~d~G~Y~C~~~n~~g 285 (805)
.+.|.|.+. .+.|.+.|+|+++|..+.... .+.+.. ..+ .++|.|.+++ .++.|.|+|.|.|...
T Consensus 489 ~~~l~C~~~-~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 489 NKVGTCVSE-GSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp EEEEEEEEE-EEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred eeEEEEECC-CCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 456799884 236889999999999987543 222211 111 3679999988 5668899999999854
No 406
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=9e-15 Score=123.17 Aligned_cols=94 Identities=21% Similarity=0.327 Sum_probs=83.8
Q ss_pred CCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 689 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 689 ~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
..||.|...+.+. .+.+|+.+.|.|.+. + |.+.|.|+|+|+.+..+.++.+..++....|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~~--~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2edf_A 6 SGPAAIIKPLEDQ-WVAPGEDVELRCELS--R-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCE 81 (103)
T ss_dssp CCCCCEEECCCCE-EECTTSCEEECCEES--S-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEE
T ss_pred CCCcEEEecCCcc-EEcCCCCEEEEEEEe--C-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEE
Confidence 3688999999888 999999999999998 7 88899999999999999999988888888999999999999999999
Q ss_pred EEcCCccEEEEEEEEEEEeCCC
Q psy2166 769 ATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
|.| ...++.|.|...|..
T Consensus 82 a~n----~~~~~~l~V~~~p~~ 99 (103)
T 2edf_A 82 VEA----SKSTASLHVEEKASG 99 (103)
T ss_dssp CSS----CEEEEEEEECCCSSS
T ss_pred Ecc----CCcEEEEEEeCCCCC
Confidence 999 477888888765444
No 407
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=1.2e-14 Score=122.44 Aligned_cols=92 Identities=21% Similarity=0.202 Sum_probs=80.3
Q ss_pred CCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC--CeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 691 PPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH--RIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 691 ~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
|+.|...+.+. .+.+|+.++|.|.+. + |.+.|+|+|+|+.+..+. ++.+..++....|.|.++..+|+|.|+|.
T Consensus 7 p~~~~~~~~~~-~v~~G~~v~l~C~~~--~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 82 (103)
T 1x44_A 7 GIMVTKQLEDT-TAYCGERVELECEVS--E-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVM 82 (103)
T ss_dssp SCCCSBCCCCE-EEETTEEEEEEEECS--S-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEE
T ss_pred CceeeccCCCE-EEECCCCEEEEEEec--C-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEE
Confidence 44588888888 999999999999997 7 779999999999999888 66888888888999999999999999999
Q ss_pred EEcCCccEEEEEEEEEEEeCCC
Q psy2166 769 ATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
|.| .+.++.|.|...|.+
T Consensus 83 a~n----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 83 TTG----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp ETT----EEEEEEEEEECCCSC
T ss_pred ECC----CcEEEEEEEeCCCCC
Confidence 988 678888888765543
No 408
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.55 E-value=7.3e-15 Score=122.75 Aligned_cols=90 Identities=29% Similarity=0.433 Sum_probs=79.5
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.+.|+|+|..+...... ...+...|.|.++..+|+|.|+|.|
T Consensus 10 ~~P~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a 83 (99)
T 2yr3_A 10 VAPSFSSVLKDC-AVIEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYTCLA 83 (99)
T ss_dssp EEEEEEECCCCE-EECTTCCEEEECEEE--EESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEEEEE
T ss_pred cCCceeecCCCC-EEeCCCeEEEEEEEe--eeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEEEEE
Confidence 688999888888 999999999999998 9999999999999988766442 3345668999999999999999999
Q ss_pred EcCCccEEEEEEEEEE
Q psy2166 770 TNKWGQAEISVNLECV 785 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~ 785 (805)
.|..|....++.|.|+
T Consensus 84 ~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 84 ENALGQVSCSAWVTVH 99 (99)
T ss_dssp ECSSCEEEEECCEEEC
T ss_pred EECCCeEEEEEEEEEC
Confidence 9999999998888873
No 409
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=8.8e-15 Score=129.29 Aligned_cols=85 Identities=21% Similarity=0.359 Sum_probs=75.6
Q ss_pred CCcccccCCCCeEEEEEEEeecCCCCeEEEEEECC----------------------------EEc-cCCCCeEEEeeCc
Q psy2166 698 FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG----------------------------KPI-EASHRIRTVHAFG 748 (805)
Q Consensus 698 ~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g----------------------------~~l-~~~~~~~~~~~~~ 748 (805)
+.++ .+.+|++++|.|.+. |.|.|.|+|+|+| ..+ ....++.+...+.
T Consensus 25 p~~~-~v~~G~~v~L~C~~~--G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~ 101 (139)
T 1gxe_A 25 PDTI-VVVAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKD 101 (139)
T ss_dssp CCEE-EESSSSCCCCEEECC--SBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETT
T ss_pred CCCE-EEeCCCeEEEEEEEE--EcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCC
Confidence 4556 899999999999998 9999999999999 555 3557787777777
Q ss_pred EEEEEEcCCCCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 749 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 749 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
...|.|.++..+|+|.|+|.|.|.+|.++.++.|.|.
T Consensus 102 ~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 102 RSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 7899999999999999999999999999999999885
No 410
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.55 E-value=8.1e-14 Score=137.73 Aligned_cols=169 Identities=14% Similarity=0.176 Sum_probs=110.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EE---c------------cCCCceEEEEe-CcEEEEEEcccCcCCceEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KP---I------------FHKNRVKMVSD-FGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~---l------------~~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y 377 (805)
+.+|+.++|.|.+. .+.+.+.|+|++ .. + ....++.+..+ .....|.|.+++.+|+|.|
T Consensus 11 v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (238)
T 1bec_A 11 AVTGGKVTLSCQQT---NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVY 87 (238)
T ss_dssp EETTCCEEEEEEES---SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEE
T ss_pred EeCCCcEEEEEEeC---CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEE
Confidence 78999999999984 357899999853 11 1 01245555432 4567899999999999999
Q ss_pred EEEEEeCce---e-e-EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCC
Q psy2166 378 VCRAWNKYG---E-D-FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEG 452 (805)
Q Consensus 378 ~C~a~n~~g---~-~-~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (805)
.|.+.|..+ . . .....|.|....
T Consensus 88 ~C~~~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------------------------- 115 (238)
T 1bec_A 88 FCASGGGRGSYAEQFFGPGTRLTVLEDL---------------------------------------------------- 115 (238)
T ss_dssp EEEEESCTTCGGGCEECCCEEEEEESCG----------------------------------------------------
T ss_pred EEEEecCCCCccccccCCCEEEEEeccC----------------------------------------------------
Confidence 999998642 1 1 122456554210
Q ss_pred ceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEE
Q psy2166 453 QSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVE 531 (805)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~ 531 (805)
....+|.+....+....+.+|+.++|.|.+.+. .|. +.++
T Consensus 116 --------------------------------------~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~-~P~~~~v~ 156 (238)
T 1bec_A 116 --------------------------------------RQVTPPKVSLFEPSKAEIANKQKATLVCLARGF-FPDHVELS 156 (238)
T ss_dssp --------------------------------------GGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEE-BSCCEEEE
T ss_pred --------------------------------------CCCCCCceEEECCChHHcccCCceEEEEEEeeE-eCCCcEEE
Confidence 012466666554443346789999999999952 354 5999
Q ss_pred EEECCEEccCCCceE---EEeeCCE----EEEEEccCCCCC-CEEEEEEEEcCCc
Q psy2166 532 WFYNGKKLPHGHRYR---TFHDFGI----VILDILYCYEEN-SGVYECRATNKYG 578 (805)
Q Consensus 532 W~~~g~~l~~~~~~~---~~~~~~~----~~L~i~~v~~~d-~G~Y~C~a~n~~g 578 (805)
|+|||..+..+.+.. ....++. +.|.|......| .|.|+|.|.|...
T Consensus 157 W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 157 WWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred EEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 999999987653221 2223332 235555444444 6789999999743
No 411
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.55 E-value=2.7e-14 Score=130.17 Aligned_cols=95 Identities=24% Similarity=0.366 Sum_probs=85.7
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEee-CcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA-FGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.+|.|...+.+. .+.+|+.++|.|.+. |.|.|.|.|+|+|..+....++.+... .+...|.|.+++.+|+|.|+|.
T Consensus 40 ~~P~~~~~~~~~-~v~~G~~v~L~C~~~--g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 40 VKPYFTKTILDM-EVVEGSAARFDCKVE--GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEEE--EESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCcE-EEeCCCeEEEEEEEE--EecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEE
Confidence 578899888888 999999999999998 999999999999999998888876543 4567899999999999999999
Q ss_pred EEcCCccEEEEEEEEEEEe
Q psy2166 769 ATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~ 787 (805)
|.|.+|....++.|.|...
T Consensus 117 a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVETM 135 (154)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEECCCeEEEEEEEEEeCc
Confidence 9999999999999999754
No 412
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.55 E-value=3.6e-14 Score=118.52 Aligned_cols=95 Identities=26% Similarity=0.470 Sum_probs=84.8
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
..+|.|...+.... +.+|++++|.|.+. +.|.+.+.|+|+|..+..+.++.+..+++...|.|.+++.+|+|.|+|.
T Consensus 4 ~~~P~i~~~~~~~~-v~~G~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (99)
T 3puc_A 4 SSKPVIVTGLQDTT-VSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCT 80 (99)
T ss_dssp CEEEEEEECCCCEE-EESSSCEEEEEEEE--EESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEecCccEE-EeCCCcEEEEEEEE--ecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEE
Confidence 45778877766654 89999999999999 6788899999999999988899888888888999999999999999999
Q ss_pred EEcCCcceEEEEEEEEee
Q psy2166 573 ATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~ 590 (805)
|.|..|.....+.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 81 VKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEeCCCcEeEEEEEEEEe
Confidence 999999999999998864
No 413
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=4.3e-14 Score=118.07 Aligned_cols=95 Identities=29% Similarity=0.416 Sum_probs=82.0
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEE-eeCCEEEEEEccCCCCCCEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTF-HDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
..+|.|...+.+.. +.+|+.++|.|.+. |.|.+.+.|+|+|..+..+.++.+. ..++...|.|.+++.+|+|.|+|
T Consensus 3 ~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 79 (99)
T 1g1c_A 3 MEAPKIFERIQSQT-VGQGSDAHFRVRVV--GKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMV 79 (99)
T ss_dssp CEEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCceEecCcceE-EcCCCcEEEEEEEE--EeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEE
Confidence 35688877766655 89999999999999 6788899999999999877776653 45677789999999999999999
Q ss_pred EEEcCCcceEEEEEEEEee
Q psy2166 572 RATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~ 590 (805)
.|.|..|.....+.|.|..
T Consensus 80 ~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 80 KAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEECCCcEEEEEEEEEec
Confidence 9999999999999998865
No 414
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.54 E-value=7.5e-14 Score=114.20 Aligned_cols=89 Identities=18% Similarity=0.190 Sum_probs=75.7
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
.+|.|+..+. ++.+.+|+.++|.|.+. + +.+.|+|+|||..+..+.++.+..++..++|.|.+++.+|+|.|+|.|
T Consensus 4 ~~~~~~~~~~-~~~v~~G~~v~l~C~v~--~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 4 ALIEVEKPLY-GVEVFVGETAHFEIELS--E-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCEEECCC-CEEEETTSCEEEEEEES--S-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCcEeeccCc-ceEEeCCCCEEEEEEEC--C-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEE
Confidence 4566766665 78999999999999997 3 447899999999999999999998888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEec
Q psy2166 144 WNLAGETFTSTTIYCST 160 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~ 160 (805)
.|. ..++.|.|..
T Consensus 80 ~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 80 ANT----KSAANLKVKE 92 (93)
T ss_dssp TTE----EEEEEEEEEC
T ss_pred CCC----cEEEEEEEEc
Confidence 763 4667777753
No 415
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.54 E-value=2.5e-14 Score=141.94 Aligned_cols=182 Identities=13% Similarity=0.140 Sum_probs=113.0
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEEC--CE---ec--------------CCCCceEEEec--CcEEEEEEcccc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GK---PL--------------ELGSRFKTTAD--FGFVTLDLTEVY 132 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~---~i--------------~~~~~~~~~~~--~~~~~L~I~~~~ 132 (805)
..+.+.+|++|+|.|.+.+...+...+.|+|. +. .+ ...+|+.+..+ .+.++|+|.+++
T Consensus 7 ~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (248)
T 3u2s_H 7 GGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLR 86 (248)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 36789999999999999742234568999983 21 11 11357777654 467789999999
Q ss_pred cCCCeEEEEEEEeCC----------------------eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCC
Q psy2166 133 DRDQGIYTCRAWNLA----------------------GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQ 190 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~~----------------------g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 190 (805)
.+|+|.|.|.+.+.. ......+.|.|....
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~---------------------------- 138 (248)
T 3u2s_H 87 VEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSAS---------------------------- 138 (248)
T ss_dssp GGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCC----------------------------
T ss_pred HHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccC----------------------------
Confidence 999999999998741 111123445554211
Q ss_pred CCCCCCCCCCCCCceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEEcC----eEEEEEc
Q psy2166 191 PAGVPDSEDGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG----MVVLEIL 266 (805)
Q Consensus 191 ~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~~~~~~----~~~L~i~ 266 (805)
..+|.+....+.. .+..|+.++|.|.+....++.+.+.|+++|..+...........++ .+.|.|.
T Consensus 139 ---------~~~P~v~~~~~~~-~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~ 208 (248)
T 3u2s_H 139 ---------TKGPSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVP 208 (248)
T ss_dssp ---------CBCCEEEEECCC-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEE
T ss_pred ---------CCCCEEEEeCCCc-cccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEC
Confidence 1335444332222 2457999999999864332257899999986432111000111111 2468888
Q ss_pred CCCCcccEEEEEEEEcCCeeEEEEEEEE
Q psy2166 267 GTKIEDTGVYTCRATNKWGQAEISVNLE 294 (805)
Q Consensus 267 ~~~~~d~G~Y~C~~~n~~g~~~~~~~l~ 294 (805)
....+| |.|+|.|.|..+.......+.
T Consensus 209 ~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 235 (248)
T 3u2s_H 209 SSSLGT-QTYICNVNHKPSNTKVDKKVE 235 (248)
T ss_dssp GGGBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred hhhcCC-CeEEEEEEECCCCcceEEEEc
Confidence 888888 999999999877666555544
No 416
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.54 E-value=6e-14 Score=140.00 Aligned_cols=176 Identities=11% Similarity=0.081 Sum_probs=113.5
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--E--e-c------------CCCCceEEEec-CcEEEEEEccccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--K--P-L------------ELGSRFKTTAD-FGFVTLDLTEVYD 133 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~--~-i------------~~~~~~~~~~~-~~~~~L~I~~~~~ 133 (805)
.+..+.+.+|+.++|.|.+. .+.+.|.|+|+. . . + ....|+.+..+ .+..+|.|.+++.
T Consensus 9 ~p~~v~v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 85 (252)
T 1oga_E 9 SPKYLFRKEGQNVTLSCEQN---LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQK 85 (252)
T ss_dssp SCSEEEEETTCCEEECCEEC---SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCS
T ss_pred cCCeEEEcCCCcEEEEEEeC---CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCCh
Confidence 44467899999999999986 357899999852 1 1 1 12357776542 3456899999999
Q ss_pred CCCeEEEEEEEeCC---eeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccc
Q psy2166 134 RDQGIYTCRAWNLA---GETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQ 210 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~---g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 210 (805)
+|+|.|.|.+.+.. ........|.|..... ...+|.+....+
T Consensus 86 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-----------------------------------~~~~P~v~~~~~ 130 (252)
T 1oga_E 86 NPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLK-----------------------------------NVFPPEVAVFEP 130 (252)
T ss_dssp CCCEEEEEEEESSTTSCCEECCCEEEEEESCGG-----------------------------------GCBCCEEEEECC
T ss_pred hhCEEEEEEEecCCccceeECCCEEEEEecccC-----------------------------------CCCCCeEEEECC
Confidence 99999999999851 1112234566653210 013455554322
Q ss_pred cccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEE---E--E--EEcC----eEEEEEcCCCCc-ccEEEE
Q psy2166 211 HLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIR---T--V--HAFG----MVVLEILGTKIE-DTGVYT 277 (805)
Q Consensus 211 ~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~---~--~--~~~~----~~~L~i~~~~~~-d~G~Y~ 277 (805)
....+.+|+.++|.|.+.. ..|. +.+.|+|+|..+....... . . ..++ .+.|.|...... |.|.|+
T Consensus 131 ~~~~~~~g~~~~L~C~~~g-~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~yt 209 (252)
T 1oga_E 131 SEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFR 209 (252)
T ss_dssp CHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEE
T ss_pred ChhhhccCCceEEEEEEee-EcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEE
Confidence 2223557999999999842 2354 6999999999886542211 0 0 0122 245777765553 678999
Q ss_pred EEEEcCCee
Q psy2166 278 CRATNKWGQ 286 (805)
Q Consensus 278 C~~~n~~g~ 286 (805)
|.+.|....
T Consensus 210 C~v~~~~l~ 218 (252)
T 1oga_E 210 CQVQFYGLS 218 (252)
T ss_dssp EEEEECCBC
T ss_pred EEEEcCCCC
Confidence 999997544
No 417
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.53 E-value=7.5e-14 Score=137.91 Aligned_cols=177 Identities=11% Similarity=0.156 Sum_probs=113.8
Q ss_pred ccCCCeEEEEEEEeecCCC----CcEEEEEECC--E---Ec---c----------------CCCceEEEEe--CcEEEEE
Q psy2166 316 LKDGDSAHFECTLTPVNDP----ELKVEWFHNG--K---PI---F----------------HKNRVKMVSD--FGFVVMD 365 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p----~~~v~W~~~g--~---~l---~----------------~~~~~~~~~~--~~~~~l~ 365 (805)
+.+|+.++|.|.+. +.+ ...+.|++.. . .+ . ...++.+..+ .....|.
T Consensus 12 v~~G~~v~L~C~~~--~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 89 (239)
T 3tv3_H 12 VEASETLSLTCAVS--GDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLK 89 (239)
T ss_dssp ECTTSCEEEEEEEE--SSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEE
T ss_pred EcCCCCEEEEEEEc--CCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEE
Confidence 88999999999997 443 4589999832 1 11 0 1245665544 4567899
Q ss_pred EcccCcCCceEEEEEEEeCce-----------e--eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCc
Q psy2166 366 IAYVQSHDSGEYVCRAWNKYG-----------E--DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAP 432 (805)
Q Consensus 366 i~~v~~~d~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 432 (805)
|.+++.+|+|.|.|.+.+..+ . ......|.|..
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~---------------------------------- 135 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS---------------------------------- 135 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC----------------------------------
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc----------------------------------
Confidence 999999999999999986531 0 01112343321
Q ss_pred ccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCC
Q psy2166 433 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 512 (805)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~ 512 (805)
....+|.+....+... +..|+
T Consensus 136 ----------------------------------------------------------~~~~~P~v~~~~~~~~-~~~g~ 156 (239)
T 3tv3_H 136 ----------------------------------------------------------ASTKGPSVFPLAPSSK-STSGG 156 (239)
T ss_dssp ----------------------------------------------------------CCCBCCEEEEECCCCC-C--TT
T ss_pred ----------------------------------------------------------CCCcCCEEEEECCChh-hccCC
Confidence 1134566664444333 56799
Q ss_pred eEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEe-eCC---EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 513 SAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFH-DFG---IVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 513 ~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
.++|.|.+.+..+++..++|+++|..+.......... ++. .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 157 ~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 157 TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred cEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 9999999996433355799999987542110000111 111 2358899888888 9999999999887776666554
No 418
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=9.5e-15 Score=122.80 Aligned_cols=93 Identities=17% Similarity=0.175 Sum_probs=82.6
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCC-eEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~-~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.||.|...+.+. .+.+|+.++|.|.+. +.|. +.+.|+|||+.+..+.++.+..++....|.|.++..+|+|.|+|.
T Consensus 7 ~p~~~~~~~~~~-~v~~G~~v~l~C~v~--~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 7 GHVGITKRLKTM-EVLEGESCSFECVLS--HESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCCCSBCCCCE-EEESSCCEEEEEECS--SCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEE
T ss_pred CCCEEEecCCCc-EEcCCCcEEEEEEEc--CCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEE
Confidence 577888888888 999999999999998 7775 489999999999999999988888888999999999999999999
Q ss_pred EEcCCccEEEEEEEEEEEeCC
Q psy2166 769 ATNKWGQAEISVNLECVVWSP 789 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~~~ 789 (805)
|. +...+++|+|...|.
T Consensus 84 a~----~~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 84 VR----GLTSKASLIVRERSG 100 (104)
T ss_dssp ET----TEEEEECEEEECCCS
T ss_pred EC----CeeEEEEEEEeCCCc
Confidence 84 477899999987554
No 419
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.53 E-value=1.9e-14 Score=116.78 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=71.0
Q ss_pred CeEEecCCCCc--eecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 66 PVFIVPLKPEF--KLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 66 p~~~~~~~~~~--~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
|.+++.+..+. .+.+|+.++|.|.+. .|.+.|+|+|||..|..+.++.+..+++.++|.|.+++.+|+|.|+|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~---~p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVD---REDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVA 80 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECS---CTTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEEC
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEEC---CCCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEE
Confidence 55555555454 456899999999986 4778899999999999999999999999999999999999999999999
Q ss_pred EeCCeeEEEEEEEEE
Q psy2166 144 WNLAGETFTSTTIYC 158 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V 158 (805)
.| ...+++|+|
T Consensus 81 ~n----~~~~~~ltV 91 (91)
T 2lvc_A 81 GD----ECAYFTVTI 91 (91)
T ss_dssp SS----CEEEEEEEC
T ss_pred cc----eEEEEEEEC
Confidence 54 455566654
No 420
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=2e-14 Score=121.34 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=79.9
Q ss_pred CCCeeeecCCc---ccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEE
Q psy2166 690 RPPQFTSEFQH---LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYT 766 (805)
Q Consensus 690 ~~P~~~~~~~~---~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 766 (805)
.+|.+...+.+ . .+.+|+.++|.|.+. |.|.+ |.|+|+|+.+..+.++.+..++....|.|.+++.+|+|.|+
T Consensus 6 ~~P~~~~~p~~~~~~-~v~~G~~v~l~C~~~--~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 81 (104)
T 2e6p_A 6 SGPVHILSPQDKVSL-TFTTSERVVLTCELS--RVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFE 81 (104)
T ss_dssp SSSCCCCBCCSCEEE-EEESSSCEECCEECS--STTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEE
T ss_pred CCCCEEECCCCCccE-EEeCCCcEEEEEEec--CCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEE
Confidence 56777777776 6 899999999999998 88988 99999999999999998888888889999999999999999
Q ss_pred EEEEcCCccEEEEEEEEEEEeCC
Q psy2166 767 CRATNKWGQAEISVNLECVVWSP 789 (805)
Q Consensus 767 C~a~N~~G~~~~~~~l~V~~~~~ 789 (805)
|.|.|..| .+.|.|.+.|.
T Consensus 82 C~a~n~~~----~~~l~V~~~P~ 100 (104)
T 2e6p_A 82 CRTEGVSA----FFGVTVQDPSG 100 (104)
T ss_dssp EECSSCCC----CEEEEEECCCC
T ss_pred EEECCceE----EEEEEEcCCCC
Confidence 99999754 67777765443
No 421
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.53 E-value=4.1e-14 Score=118.71 Aligned_cols=92 Identities=20% Similarity=0.243 Sum_probs=73.1
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEE--EeeC---cEEEEEEcCCCCCCCEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT--VHAF---GMVVLEILGTKIEDTGV 764 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~~~---~~~~L~i~~v~~~d~G~ 764 (805)
.||+|.... ....|+.+.|.|.+. |+|.|.|+|+|||+.+..+.++.+ ...+ ....|.|.++..+|+|.
T Consensus 3 ~pP~i~~~~----~~~~~~~~~~~c~v~--G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 76 (103)
T 1wwb_X 3 FAPTITFLE----SPTSDHHWCIPFTVK--GNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGD 76 (103)
T ss_dssp CCCCCCCCC----CCCCCCEEEEEEEEE--CSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred CCCEEEecc----CceECcEEEEEEEEE--EeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEE
Confidence 456654221 235688999999999 999999999999999988876432 2111 13459999999999999
Q ss_pred EEEEEEcCCccEEEEEEEEEEEe
Q psy2166 765 YTCRATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 765 Y~C~a~N~~G~~~~~~~l~V~~~ 787 (805)
|+|.|.|.+|.++.++.|.|...
T Consensus 77 Y~C~A~N~~G~~~~~~~l~V~~~ 99 (103)
T 1wwb_X 77 YTLIAKNEYGKDEKQISAHFMGW 99 (103)
T ss_dssp EEEEEECSSCEEEEEEEECCSCC
T ss_pred EEEEEEeCCCcEeEEEEEEECCC
Confidence 99999999999999999998643
No 422
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.53 E-value=3.7e-14 Score=120.44 Aligned_cols=98 Identities=23% Similarity=0.326 Sum_probs=85.6
Q ss_pred CCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 492 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 492 ~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
...+|.|...+.... +.+|+.++|.|.+. +.|.+.+.|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|
T Consensus 10 ~~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 86 (107)
T 3irg_B 10 QGSPPCFLRFPRPVR-VVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCCeeEcCCccEE-EeCCCeEEEEEEEe--ecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEE
Confidence 456788887776554 89999999999998 668889999999999998888888888888899999999999999999
Q ss_pred EEEcCCcceEEEEEEEEeeee
Q psy2166 572 RATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~ 592 (805)
.|.|..|.....+.|.|..+|
T Consensus 87 ~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 87 RARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEEETTEEEEEEEEEEEEC--
T ss_pred EEEcCCCcEEEEEEEEEEcCC
Confidence 999999999999999988654
No 423
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3e-14 Score=118.56 Aligned_cols=92 Identities=15% Similarity=0.263 Sum_probs=78.7
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
.+|.|...+. ++.+.+|+.++|.|.+ .|.+.|+|+|||..+..+.++.+..++..++|.|.+++.+|+|.|+|.|
T Consensus 6 ~p~~~~~~~~-~~~v~~G~~v~l~C~v----~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 6 SGLKILTPLT-DQTVNLGKEICLKCEI----SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAP 80 (100)
T ss_dssp CCCCCSBCCC-CEEEETTSCCCEEEEC----SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCEEeccCC-ceEEcCCCCEEEEEEe----CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEE
Confidence 3456655544 7899999999999998 4567899999999999999999999888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEeccc
Q psy2166 144 WNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~~~ 162 (805)
.|. .....+.|.|..+|
T Consensus 81 ~N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 81 DAY--NVTLPAKVHVISGP 97 (100)
T ss_dssp SSS--CCCEEEEEEEECCS
T ss_pred cCC--CeeEEEEEEEeCCC
Confidence 997 45667788887654
No 424
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.53 E-value=6.6e-14 Score=118.85 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=75.4
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCC---eEEEEEECCE-Ecc--CCCCeEEEe--e----CcEEEEEEcCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQT---MTVEFLYNGK-PIE--ASHRIRTVH--A----FGMVVLEILGT 757 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~---~~v~W~~~g~-~l~--~~~~~~~~~--~----~~~~~L~i~~v 757 (805)
..|.|...|.+. .+.+|+.++|.|.+. |.|. |.|+|+|++. .+. ...++.+.. . .+...|.|.++
T Consensus 3 p~p~f~~~p~~~-~v~~G~~v~L~C~~~--g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 79 (108)
T 3cx2_A 3 PIGLFVMRPQDG-EVTVGGSITFSARVA--GASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDA 79 (108)
T ss_dssp CCCSCSBCCCCE-EEETTCCEEEEEEEE--CC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSC
T ss_pred CccEEEeCCCcE-EEeCCCCEEEEEEEC--CCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecC
Confidence 468888888888 999999999999999 9998 9999999883 222 123444321 1 12468999999
Q ss_pred CCCCCEEEEEEEEcCCccEEEEEEEEEE
Q psy2166 758 KIEDTGVYTCRATNKWGQAEISVNLECV 785 (805)
Q Consensus 758 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 785 (805)
+.+|+|.|+|.|.|.+|..+.++.|+|.
T Consensus 80 ~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 80 QPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999999999985
No 425
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.52 E-value=6e-15 Score=143.16 Aligned_cols=179 Identities=10% Similarity=0.026 Sum_probs=110.5
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCC--CceEEEEECCEecCCCCce-EE-EecC---cEEEEEEcccccCCCe
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDP--NLKIEWIFNGKPLELGSRF-KT-TADF---GFVTLDLTEVYDRDQG 137 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~k~g~~i~~~~~~-~~-~~~~---~~~~L~I~~~~~~D~G 137 (805)
+|.+....+....+.+|+.++|.|.+.+. .| .+.|.| ++..+...... .. ..++ ...+|.|.+++.+|+|
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~-~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g 79 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGL-RDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGK 79 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTC-CSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTC
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeee-ECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCC
Confidence 35555555556788999999999999842 23 268999 44443211000 00 0011 3457999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.+.|..+.......+.+. ....+|.+.........+.+
T Consensus 80 ~Y~C~~~~~~~~~~~~~~i~~~--------------------------------------~~~~~P~v~~~~~~~~~~~~ 121 (214)
T 1ow0_A 80 TFTCTAAYPESKTPLTATLSKS--------------------------------------GNTFRPEVHLLPPPSEELAL 121 (214)
T ss_dssp EEEEEECCSSCSSCEEEEEECC--------------------------------------SSCCCCEEEEECCCTTTTTS
T ss_pred eEEEEEecCCCCCceeEeeccC--------------------------------------CCCCCCEEEecCCCHHHhcc
Confidence 9999999876543222233210 00145655443333334678
Q ss_pred CceEEEEEEEeeCCCC-CeEEEEEECCEEccCCCcEE---EEE---EcCe----EEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 218 GEIAHFEASLIPVGDQ-TMTVEFLYNGKPIEASHRIR---TVH---AFGM----VVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p-~~~i~W~k~g~~l~~~~~~~---~~~---~~~~----~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
|+.++|.|.+.. .+| .+.|.|+|||..+....... ... .++. +.|.|.....+|.|.|+|.|.|...
T Consensus 122 g~~~~L~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 122 NELVTLTCLARG-FSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp SSEEEEEEEEEE-ESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred CCceEEEEEEee-eECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 999999999853 234 46999999999886542111 122 2332 3455554444568999999999754
No 426
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.52 E-value=8.2e-14 Score=136.82 Aligned_cols=182 Identities=14% Similarity=0.177 Sum_probs=117.1
Q ss_pred CCceecCCCcEEEEEEEecCCCCCceEEEEEC--CE---ec--------------CCCCceEEEecC--cEEEEEEcccc
Q psy2166 74 PEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GK---PL--------------ELGSRFKTTADF--GFVTLDLTEVY 132 (805)
Q Consensus 74 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~---~i--------------~~~~~~~~~~~~--~~~~L~I~~~~ 132 (805)
+.+.+.+|++|+|.|.+.+.......+.|||. +. .+ ...+|+.+..+. +.++|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (230)
T 3n9g_H 8 GAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLR 87 (230)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCC
Confidence 35789999999999999742234568999973 21 11 013577776543 57789999999
Q ss_pred cCCCeEEEEEEEeCC-----e-e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCc
Q psy2166 133 DRDQGIYTCRAWNLA-----G-E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQ 204 (805)
Q Consensus 133 ~~D~G~Y~C~a~n~~-----g-~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 204 (805)
.+|+|.|.|.+.+.. + . ....+.|.|.... ..+|.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~P~ 130 (230)
T 3n9g_H 88 SEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS-------------------------------------TKGPS 130 (230)
T ss_dssp GGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC-------------------------------------CBCCE
T ss_pred hhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC-------------------------------------CCCCE
Confidence 999999999998753 1 1 1123456664311 13344
Q ss_pred eecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEE--EEEEcC----eEEEEEcCCCCcccEEEEE
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR--TVHAFG----MVVLEILGTKIEDTGVYTC 278 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~--~~~~~~----~~~L~i~~~~~~d~G~Y~C 278 (805)
+....... .+.+|+.++|.|.+.....+.+.+.| +|..+....... ....++ .+.|.|.....+| |.|+|
T Consensus 131 v~~~~~~~-~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC 206 (230)
T 3n9g_H 131 VFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 206 (230)
T ss_dssp EEEECCCC-CCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEE
T ss_pred EEecCCCc-cccCCCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEE
Confidence 44322222 25689999999998642322578999 665543211100 011111 2479999999999 99999
Q ss_pred EEEcCCeeEEEEEEEEEe
Q psy2166 279 RATNKWGQAEISVNLECV 296 (805)
Q Consensus 279 ~~~n~~g~~~~~~~l~v~ 296 (805)
.|.|..+.......+.+.
T Consensus 207 ~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 207 NVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp EEEEGGGTEEEEEECCCC
T ss_pred EEEECCCCcceEEEccCC
Confidence 999988776666665543
No 427
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.52 E-value=1.1e-15 Score=133.33 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=81.9
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeE-EEEEECCEEccC--CCCeEEE--eeCc--EEEEEEcCCCCCCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMT-VEFLYNGKPIEA--SHRIRTV--HAFG--MVVLEILGTKIEDT 762 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~-v~W~~~g~~l~~--~~~~~~~--~~~~--~~~L~i~~v~~~d~ 762 (805)
.||.|.. +... .+.+|+.+.|.|.+. |.|.|. |.|+++|+.+.. ..++.+. ...+ ...|.|.++..+|+
T Consensus 13 ~~P~i~~-~~~~-~~~~G~~v~l~C~~~--g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (122)
T 2cry_A 13 GPPIISS-TQTQ-HALHGEKGQIKCFIR--STPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADF 88 (122)
T ss_dssp SSCCEEE-ECCC-CCCTTSCCCCCEEEC--CSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHH
T ss_pred cCCCccC-CCeE-EEecCCCEEEEEEEe--ecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhC
Confidence 6788888 7777 999999999999999 999987 999999998875 4666652 2233 56899999999999
Q ss_pred -EEEEEEEEcCCccEEEEEEEEEEEeCCC
Q psy2166 763 -GVYTCRATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 763 -G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
|.|+|.|.|.+|.+...+.|.|...++.
T Consensus 89 ~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 117 (122)
T 2cry_A 89 QTIYNCTAWNSFGSDTEIIRLKEQGSEMS 117 (122)
T ss_dssp HSCEEEEEECSSCEEEEEECCCCSCSSCC
T ss_pred CceEEEEEECCCCeEEEEEEEEECCCCCC
Confidence 9999999999999999999998764443
No 428
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.52 E-value=2.9e-14 Score=139.98 Aligned_cols=180 Identities=11% Similarity=0.105 Sum_probs=111.4
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---c------------C-CCCceEEEecC--cEEEEEEccc
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---L------------E-LGSRFKTTADF--GFVTLDLTEV 131 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---i------------~-~~~~~~~~~~~--~~~~L~I~~~ 131 (805)
.+..+.+.+|+.++|.|.+.+...+.+.+.|+|. +.. + . ...|+.+..+. +.++|.|.++
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (230)
T 1ypz_F 7 PEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSL 86 (230)
T ss_dssp SCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSC
T ss_pred cCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcC
Confidence 3446789999999999999832115678999984 221 1 0 24577776543 6779999999
Q ss_pred ccCCCeEEEEEEEeC--Ce--eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceec
Q psy2166 132 YDRDQGIYTCRAWNL--AG--ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTS 207 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~--~g--~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 207 (805)
+.+|+|.|.|.+.+. .. .....+.|.|..+..... ...+|....
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~--------------------------------~~~~p~~~v 134 (230)
T 1ypz_F 87 EEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLD--------------------------------ADISPKPTI 134 (230)
T ss_dssp CGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCC--------------------------------SCCSCCCCE
T ss_pred ChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCc--------------------------------ccCCCCceE
Confidence 999999999999874 11 111234677652110000 001111111
Q ss_pred ccccccccCCCceEEEEEEEeeCCCCC-eEEEEEE-CCEEccCCCcEEEEEEcC----eEEEEEcCCCCcccEEEEEEEE
Q psy2166 208 EFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLY-NGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYTCRAT 281 (805)
Q Consensus 208 ~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k-~g~~l~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~~~ 281 (805)
..+....+.+|+.++|.|.+.. ..|. +.|.|++ +|..+...........++ .+.|.|..... + |.|+|.|.
T Consensus 135 ~~p~~~~v~~g~~~~L~C~~~g-~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~ 211 (230)
T 1ypz_F 135 FLPSVAETNLHKTGTYLCLLEA-FFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVK 211 (230)
T ss_dssp ECCCHHHHHHHSCEEEEEEEEE-ESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEE
T ss_pred ECCCchhhccCCcceEEEEEee-ecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEE
Confidence 1111123557889999999852 3354 6999999 887775332111112222 24688887765 4 99999999
Q ss_pred cCCee
Q psy2166 282 NKWGQ 286 (805)
Q Consensus 282 n~~g~ 286 (805)
|..+.
T Consensus 212 ~~~~~ 216 (230)
T 1ypz_F 212 HENNK 216 (230)
T ss_dssp CSSCT
T ss_pred ECCCC
Confidence 97654
No 429
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=8.8e-14 Score=120.33 Aligned_cols=99 Identities=19% Similarity=0.217 Sum_probs=83.7
Q ss_pred CCCCCCceEec--CCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEE
Q psy2166 491 PVAEAPKFITQ--ISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 568 (805)
Q Consensus 491 ~~~~~P~~~~~--~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 568 (805)
.+..+|.|... ......+.+|+.++|.|.+. |.|.|.++|+|+|..+. ..++.+...++...|.|.++..+|+|.
T Consensus 17 ~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~--g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~ 93 (118)
T 2e7c_A 17 EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQ--GKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGE 93 (118)
T ss_dssp CCSEEEEECCCTTTSSCEEEESSSCEEEEEEEE--EESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEE
T ss_pred eeccCCeEecCcccCCCEEEECCCEEEEEEEEc--cCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEE
Confidence 44567888654 34455589999999999999 67888999999999997 456666667777889999999999999
Q ss_pred EEEEEEcCCcceEEEEEEEEeeee
Q psy2166 569 YECRATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 569 Y~C~a~n~~g~~~~~~~l~V~~~~ 592 (805)
|+|.|.|..|.....+.|.|...|
T Consensus 94 Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 94 YELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEEeCCCeEEEEEEEEEEcCC
Confidence 999999999999999999998754
No 430
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.52 E-value=2.4e-14 Score=114.29 Aligned_cols=79 Identities=16% Similarity=0.213 Sum_probs=70.0
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCeeEEEEE
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAGETFTST 154 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 154 (805)
++.+.+|+.++|.|.+. .|.+.|+|+|||.+|..+.++.+..+++.++|.|.+++.+|+|.|+|.|.| ....+
T Consensus 5 ~v~~~~G~~v~l~C~vs---~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a 77 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLS---GPGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIF 77 (84)
T ss_dssp CEEECTTSCEEEECCCS---CCSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEE
T ss_pred EEEEecCCCEEEEEEEC---CCCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEE
Confidence 67899999999999986 477889999999999999999999998888999999999999999999844 45667
Q ss_pred EEEEec
Q psy2166 155 TIYCST 160 (805)
Q Consensus 155 ~l~V~~ 160 (805)
.|+|..
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 787754
No 431
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=1.9e-14 Score=121.83 Aligned_cols=91 Identities=21% Similarity=0.269 Sum_probs=82.4
Q ss_pred CCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 689 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 689 ~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
..+|.|...+.+. .+.+|+++.|.|.+. +.|.+ |.|+|+|+.+..+.++.+..++....|.|.++..+|+|.|+|.
T Consensus 6 ~~~p~~~~~~~~~-~v~~G~~v~l~C~~~--~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (106)
T 2dlt_A 6 SGQLEVLQDIADL-TVKAAEQAVFKCEVS--DEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFV 81 (106)
T ss_dssp CCCCCEEECCCCE-EEESSCCEECCCEES--CSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEE
T ss_pred CCCCEEecCCCCe-EEeCCCeEEEEEEEc--CCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEE
Confidence 3689999999998 999999999999998 88888 9999999999999999988888888999999999999999999
Q ss_pred EEcCCccEEEEEEEEEE
Q psy2166 769 ATNKWGQAEISVNLECV 785 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~ 785 (805)
|.|. ....++.|.|.
T Consensus 82 a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 82 PDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EETS--CCCCCBCEEEE
T ss_pred EccC--CceEEEEEEEE
Confidence 9998 55567777776
No 432
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.51 E-value=1.5e-13 Score=135.31 Aligned_cols=179 Identities=11% Similarity=0.145 Sum_probs=111.0
Q ss_pred ccCCCeEEEEEEEeecCC--CCcEEEEEECC-----EEc-----c-----------CCCceEEEEe--CcEEEEEEcccC
Q psy2166 316 LKDGDSAHFECTLTPVND--PELKVEWFHNG-----KPI-----F-----------HKNRVKMVSD--FGFVVMDIAYVQ 370 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~--p~~~v~W~~~g-----~~l-----~-----------~~~~~~~~~~--~~~~~l~i~~v~ 370 (805)
+.+|++++|.|.+.+... +...|.|++.. ..+ . ...++.+..+ .+...|.|.+++
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 91 (232)
T 3qhz_H 12 VKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNMD 91 (232)
T ss_dssp ECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred ECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcCC
Confidence 789999999999973111 23345999731 111 0 1246666654 366789999999
Q ss_pred cCCceEEEEEEEeCce--------eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeee
Q psy2166 371 SHDSGEYVCRAWNKYG--------EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQ 442 (805)
Q Consensus 371 ~~d~G~Y~C~a~n~~g--------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (805)
.+|+|.|.|.+.+..+ .......|.|..
T Consensus 92 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~-------------------------------------------- 127 (232)
T 3qhz_H 92 PVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS-------------------------------------------- 127 (232)
T ss_dssp GGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS--------------------------------------------
T ss_pred hhhCEEEEEEEeeccCccccccceeeCCCeEEEEec--------------------------------------------
Confidence 9999999999987631 111223444421
Q ss_pred ecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEee
Q psy2166 443 ISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTP 522 (805)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~ 522 (805)
....+|.+....+... +..|+.++|.|.+.+
T Consensus 128 ------------------------------------------------~~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~~ 158 (232)
T 3qhz_H 128 ------------------------------------------------ASTKGPSVFPLAPSSK-STSGGTAALGCLVKD 158 (232)
T ss_dssp ------------------------------------------------SCCBCCEEEEECC--------CEEEEEEEEEE
T ss_pred ------------------------------------------------CCCCCCEEEEeccccc-ccCCCcEEEEEEEee
Confidence 1134566654333332 567999999999996
Q ss_pred CCCCCcEEEEEECCEEccCCCceEEEe-eCC---EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 523 VTDPDLVVEWFYNGKKLPHGHRYRTFH-DFG---IVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 523 ~g~p~~~v~W~~~g~~l~~~~~~~~~~-~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
..++.+.++|+++|..+.......... ++. .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 159 ~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 159 YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 433366899999986442110000111 111 2468899888888 9999999999888777666654
No 433
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.51 E-value=2.9e-13 Score=112.42 Aligned_cols=89 Identities=19% Similarity=0.321 Sum_probs=79.9
Q ss_pred ecCCCCceecCCCcEEEEEEEecCCC-CCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEEeCCe
Q psy2166 70 VPLKPEFKLGEAQPLHLEAQVEPKND-PNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAWNLAG 148 (805)
Q Consensus 70 ~~~~~~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 148 (805)
..++.++.+.+|+.++|.|.+. +. |.+.|.|+|++..+..+.++.+...++..+|.|.+++.+|+|.|+|.|.|..|
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~--g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIE--NYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEE--SCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eccCcCEEEcCCCcEEEEEEEe--ccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 3455578999999999999999 55 88999999999999998999988788888999999999999999999999999
Q ss_pred eEEEEEEEEEec
Q psy2166 149 ETFTSTTIYCST 160 (805)
Q Consensus 149 ~~~~~~~l~V~~ 160 (805)
.....+.|.|..
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 999888888854
No 434
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.51 E-value=2.3e-14 Score=143.22 Aligned_cols=168 Identities=14% Similarity=0.196 Sum_probs=110.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CEE---cc--C----------CC-ceEEEEeCcEEEEEEcccCcCCceEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GKP---IF--H----------KN-RVKMVSDFGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~~---l~--~----------~~-~~~~~~~~~~~~l~i~~v~~~d~G~Y 377 (805)
+.+|+.++|.|.+. +.+.+.+.|+|. +.. +. . .. ++.+..+.... |.|.+++.+|+|.|
T Consensus 13 v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~Y 89 (253)
T 3to4_D 13 VPRGQAVNLRCILK--NSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRTL 89 (253)
T ss_dssp EESSCCEEEEEECS--CTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEEE
T ss_pred EeCCCcEEEEEEeC--CCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeEE
Confidence 78999999999986 777889999982 111 10 0 01 44443333222 99999999999999
Q ss_pred EEEEEeCce------eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecC
Q psy2166 378 VCRAWNKYG------EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKE 451 (805)
Q Consensus 378 ~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (805)
.|.+.+..+ .......|.|...
T Consensus 90 ~C~~~~~~~~~~~~~~~~~~t~l~V~~~---------------------------------------------------- 117 (253)
T 3to4_D 90 YCTSSADHWTNTGQLYFGEGSKLTVLED---------------------------------------------------- 117 (253)
T ss_dssp EEEEECSCCSTTCCEEECCCEEEEEESC----------------------------------------------------
T ss_pred EEEEecCCCCcccceEECCCEEEEEecC----------------------------------------------------
Confidence 999987643 1112234554321
Q ss_pred CceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCc-EE
Q psy2166 452 GQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDL-VV 530 (805)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~-~v 530 (805)
.....+|.+....+....+..|+.++|.|.+.+. .|.+ .+
T Consensus 118 --------------------------------------~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~-~P~~i~v 158 (253)
T 3to4_D 118 --------------------------------------LKNVFPPEVAVFEPSEAEISHTQKATLVCLATGF-YPDHVEL 158 (253)
T ss_dssp --------------------------------------STTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEE-BSSCEEE
T ss_pred --------------------------------------CCCCCCCeEEEeCCChhhcccCCceEEEEEEceE-ECCcEEE
Confidence 1113567766655444445678999999999963 4555 99
Q ss_pred EEEECCEEccCCCceEE---E-----eeCCE---EEEEEccCCCCC-CEEEEEEEEcCC
Q psy2166 531 EWFYNGKKLPHGHRYRT---F-----HDFGI---VILDILYCYEEN-SGVYECRATNKY 577 (805)
Q Consensus 531 ~W~~~g~~l~~~~~~~~---~-----~~~~~---~~L~i~~v~~~d-~G~Y~C~a~n~~ 577 (805)
+|+|||..+..+..... . .++.. +.|.|.....+| .|.|+|.|.|..
T Consensus 159 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 159 SWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 99999999865322110 0 12222 468888877777 779999999864
No 435
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=9.2e-14 Score=116.76 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=80.5
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC----------CeEEEeeCcEEEEEEcCCCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH----------RIRTVHAFGMVVLEILGTKI 759 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~----------~~~~~~~~~~~~L~i~~v~~ 759 (805)
.+|.|...+.+. .+.+|+.+.|.|.+. + .|.++|+|||++|..+. ++.+..++....|.|.++..
T Consensus 7 p~~~~~~~l~d~-~v~eG~~a~f~C~vs--~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~ 81 (112)
T 2e6q_A 7 GTARLVAGLEDV-QVYDGEDAVFSLDLS--T--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH 81 (112)
T ss_dssp SCCCEEECCCCE-EEETTCEEEEEEEES--S--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS
T ss_pred CCcEEecCCCCe-EEcCCCcEEEEEEEC--C--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCH
Confidence 468999999999 999999999999998 6 67899999999999988 88888888888999999999
Q ss_pred CCCEEEEEEEEcCCccEEEEEEEEEEEeCCC
Q psy2166 760 EDTGVYTCRATNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 760 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 790 (805)
+|+|.|+|... +....+++|+|+..|-.
T Consensus 82 ~D~G~Y~~~~~---~~~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 82 QDSGALVGFSC---PGVQDSAALTIQESSGP 109 (112)
T ss_dssp TTCSEEEEEEE---TTEEEEEEEEEECSSCS
T ss_pred HHCccEEEEEE---CCeeEEEEEEEeCCCcc
Confidence 99999977443 34577999999865543
No 436
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=9.7e-15 Score=122.39 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=79.6
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC----CeEEEeeCcEEEEEEcCCCCCCCEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH----RIRTVHAFGMVVLEILGTKIEDTGVY 765 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~----~~~~~~~~~~~~L~i~~v~~~d~G~Y 765 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.| +.+.|+|||+.+..+. ++.+..+++...|.|.++..+|+|.|
T Consensus 7 ~p~~~~~~~~~~-~v~~G~~v~l~C~~~--~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 7 GPVLIVTPLEDQ-QVFVGDRVEMAVEVS--EEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCCCEEECCCCE-EEESSCCCBCCEEES--CSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBE
T ss_pred CCCEEEecCCce-EEcCCCCEEEEEEEe--CCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEE
Confidence 678999888888 999999999999998 888 9999999999998877 66888888888999999999999999
Q ss_pred EEEEEcCCccEEEEEEEEEEEe
Q psy2166 766 TCRATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 766 ~C~a~N~~G~~~~~~~l~V~~~ 787 (805)
+|.|.| ...+++|.|...
T Consensus 83 ~C~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 83 QVITNG----GQCEAELIVEEK 100 (101)
T ss_dssp EEECSS----CEECCBEEEECC
T ss_pred EEEEcC----CcEEEEEEEeCC
Confidence 999988 556778888653
No 437
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.50 E-value=1.1e-13 Score=115.72 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=82.2
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+.+.+.+|+.+.|.|.+. .|.+.|.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~---~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA---DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES---CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec---CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 5899998888743899999999999996 4889999999999999999999888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeC
Q psy2166 770 TNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~ 788 (805)
|....++.|.|...|
T Consensus 83 ----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ----GDEKCSTELFVRSGP 97 (100)
T ss_dssp ----TTEEEEEEEEECCSC
T ss_pred ----CCceEEEEEEEecCC
Confidence 888899999987543
No 438
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.50 E-value=1.1e-13 Score=156.88 Aligned_cols=146 Identities=14% Similarity=0.228 Sum_probs=105.9
Q ss_pred CCCeEEEEECCEEcc------------CCCceEEEeeCCEEEEEeccCCCCCcEEEEEEEEeCCcce-EEEEEEEEeecc
Q psy2166 599 QLPEVEWFYNGKKLP------------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD-VTKASLKCVSKT 665 (805)
Q Consensus 599 ~~p~v~W~~~g~~l~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p 665 (805)
|.+.+.|+|++..+. ...+..+..++ .|.|.+++.+|+|.|+|.+.|..|.. ...+.|.|..+|
T Consensus 395 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 471 (581)
T 3o3u_N 395 PPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIP 471 (581)
T ss_dssp SSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCC
T ss_pred CCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCC
Confidence 567999999875321 12344444333 49999999999999999999999988 778899998654
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCeeeecCCcccccCCCCe-EEEEEEEeecC-CCCeEEEEEECCEEccCCC-CeE
Q psy2166 666 NLILESQLPELRRQPAGVPDSEDGRPPQFTSEFQHLSNLSEGEI-AHFEASLIPVG-DQTMTVEFLYNGKPIEASH-RIR 742 (805)
Q Consensus 666 ~~~~~~~~p~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~-~~l~C~~~~~g-~p~~~v~W~~~g~~l~~~~-~~~ 742 (805)
.+|.+..... .+.+|+. +.|.|.+. | +|.|.|+|+|||+.+.... ++.
T Consensus 472 ------------------------~~p~i~~~~~---~~~~~~~~~~l~C~~~--~~~P~~~i~W~~~g~~l~~~~~~~~ 522 (581)
T 3o3u_N 472 ------------------------GKPEIVDSAS---ELTAGVPNKVGTCVSE--GSYPAGTLSWHLDGKPLVPNEKGVS 522 (581)
T ss_dssp ------------------------CCCEEESCCS---EECTTSCEEEEEEEEE--EEBSCCEEEEEETTEECCTTSTTEE
T ss_pred ------------------------CCCEEEcCCc---ccccCCceeEEEEECC--CCCCCCeEEEEECCEECCCCCCeEE
Confidence 3555554433 3455555 56799998 6 6999999999999987643 332
Q ss_pred EEe------eCc----EEEEEEcCCC-CCCCEEEEEEEEcCCccE
Q psy2166 743 TVH------AFG----MVVLEILGTK-IEDTGVYTCRATNKWGQA 776 (805)
Q Consensus 743 ~~~------~~~----~~~L~i~~v~-~~d~G~Y~C~a~N~~G~~ 776 (805)
+.. +.| .++|+|.+++ .++.|.|+|+|+|.++..
T Consensus 523 ~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 523 VKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 211 122 3579999998 556899999999997543
No 439
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.50 E-value=3.7e-14 Score=118.70 Aligned_cols=90 Identities=24% Similarity=0.407 Sum_probs=74.3
Q ss_pred CCCeeeecC----CcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCe---EEEeeCcEEEEEEcCCCCCCC
Q psy2166 690 RPPQFTSEF----QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI---RTVHAFGMVVLEILGTKIEDT 762 (805)
Q Consensus 690 ~~P~~~~~~----~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~---~~~~~~~~~~L~i~~v~~~d~ 762 (805)
.||.|...+ ... .+.+|+.+.|.|.+. |.|.|.+.|+|+|..+....++ ...... ..|.|.+++.+|+
T Consensus 3 ~~P~~~~~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D~ 77 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLH-AVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH--WSLIMESVVPSDK 77 (100)
T ss_dssp EEEEESCTTTTSCCEE-EECTTCCEEEECCEE--EESCCEEEEEETTEECCGGGSTTCCEEEGGG--TEEEECSCCGGGC
T ss_pred CCCEeEcCccccccEE-EecCCCEEEEEEEcc--ccCCCEEEEEECCEEcccccccccEEEecCe--EEEEEccCCcCCC
Confidence 466776544 234 789999999999998 9999999999999998876442 333223 3799999999999
Q ss_pred EEEEEEEEcCCccEEEEEEEEE
Q psy2166 763 GVYTCRATNKWGQAEISVNLEC 784 (805)
Q Consensus 763 G~Y~C~a~N~~G~~~~~~~l~V 784 (805)
|.|+|.|.|..|....++.|.|
T Consensus 78 G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 78 GNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCEEEEEEEEEE
Confidence 9999999999999999998887
No 440
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.50 E-value=7.4e-14 Score=114.93 Aligned_cols=90 Identities=18% Similarity=0.242 Sum_probs=75.0
Q ss_pred CCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECC--EEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 495 APKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNG--KKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 495 ~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g--~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
+|.|...+.. ..+.+|+.+.|.|.+. |.|.|.++|+|+| ..+.... .+........|.|.++..+|+|.|+|.
T Consensus 2 ~P~i~~~~~~-~~v~~G~~~~l~C~~~--g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASRK-IKIKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEECCCCCE-EEECTTBCCEEEEEEE--CCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCeEEcCCCc-eEEeCCCEEEEEEEEE--EcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEE
Confidence 5777655544 4489999999999999 7899999999999 8886553 334445667899999999999999999
Q ss_pred EEcCCcceEEEEEEEEe
Q psy2166 573 ATNKYGSDVTKASLKCV 589 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~ 589 (805)
|.|..|.....+.|.|.
T Consensus 77 a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEC
Confidence 99999999988888873
No 441
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.8e-14 Score=119.78 Aligned_cols=94 Identities=16% Similarity=0.142 Sum_probs=76.1
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCC---CCeEEEEEECCE-EccC--CCCeEEEe--eC----cEEEEEEcCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGD---QTMTVEFLYNGK-PIEA--SHRIRTVH--AF----GMVVLEILGT 757 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~---p~~~v~W~~~g~-~l~~--~~~~~~~~--~~----~~~~L~i~~v 757 (805)
.++.|...|.+. .+.+|+.++|.|.+. |. |.|.|+|||++. .+.. ..++.+.. +. ....|+|.++
T Consensus 11 ~~~~f~~~P~~v-~V~eG~~v~L~C~v~--g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 87 (118)
T 2edn_A 11 PTGVFLKKPDSV-SVETGKDAVVVAKVN--GKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKV 87 (118)
T ss_dssp CSSSCSBCCCCC-EEETTSCEECCEEEE--TTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSC
T ss_pred CcceEEECCCCe-EEeCCCCEEEEEEEe--ccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeC
Confidence 457888888888 999999999999998 64 789999999752 2222 23444422 11 2568999999
Q ss_pred CCCCCEEEEEEEEcCCccEEEEEEEEEEE
Q psy2166 758 KIEDTGVYTCRATNKWGQAEISVNLECVV 786 (805)
Q Consensus 758 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 786 (805)
..+|+|.|+|+|.|..|..+..+.|+|..
T Consensus 88 ~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 88 VLGDRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp CTTTCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred ChhhCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 99999999999999999999999999975
No 442
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.49 E-value=2.8e-13 Score=143.56 Aligned_cols=170 Identities=14% Similarity=0.164 Sum_probs=113.3
Q ss_pred ccCCCeEEEEEEEeecCC--C-CcEEEEEECCEEccCCC--ceEEEEe---CcEEEEEEcccCcCCceEEEEEEEeCcee
Q psy2166 316 LKDGDSAHFECTLTPVND--P-ELKVEWFHNGKPIFHKN--RVKMVSD---FGFVVMDIAYVQSHDSGEYVCRAWNKYGE 387 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~--p-~~~v~W~~~g~~l~~~~--~~~~~~~---~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~ 387 (805)
+.+|+.++|.|.+.+ .. | ...|.|++++..+.... ......+ .....|.|..+..+|.|.|+|.+.+..+.
T Consensus 180 ~~~g~~v~L~C~~~g-~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~ 258 (376)
T 2aty_A 180 LTITLTPKVTCVVVD-ISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 258 (376)
T ss_pred eeeCCeeEEEEEEec-cccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCC
Confidence 678999999999984 22 3 24799999986653211 0000111 12336999999999999999999988764
Q ss_pred eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceEEEEEEEeccCCC
Q psy2166 388 DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP 467 (805)
Q Consensus 388 ~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (805)
......+.+
T Consensus 259 ~~~~~~v~~----------------------------------------------------------------------- 267 (376)
T 2aty_A 259 APIEKTISK----------------------------------------------------------------------- 267 (376)
T ss_pred CceEEEEcC-----------------------------------------------------------------------
Confidence 333222221
Q ss_pred CceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceE-
Q psy2166 468 DLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYR- 546 (805)
Q Consensus 468 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~- 546 (805)
...+..+|.+.+..+... ..+|+.++|.|.+.++..+.+.|+|+|||+++.......
T Consensus 268 ---------------------~~~~~~~P~v~v~~~~~~-~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~ 325 (376)
T 2aty_A 268 ---------------------TKGRPKAPQLYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQP 325 (376)
T ss_pred ---------------------CCCCCcCCeEEeeCCCHH-HhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCc
Confidence 012246777777666554 556999999999996444578999999999885432211
Q ss_pred -EEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 547 -TFHDFG---IVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 547 -~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
...++. .+.|.|.....+|.|.|+|.|.|..-.
T Consensus 326 ~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 326 IMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred eECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 122222 345778777777899999999987543
No 443
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.49 E-value=6.3e-14 Score=117.27 Aligned_cols=96 Identities=21% Similarity=0.437 Sum_probs=79.2
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceE-EEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
..+|.|...+.... +.+|++++|.|.+. |.|.+.+.|+|+|..+....+.. ....++...|.|.+++.+|+|.|+|
T Consensus 3 ~~~P~~~~~p~~~~-~~~G~~~~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 79 (100)
T 2kdg_A 3 MGPPRFIQVPENMS-IDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYAC 79 (100)
T ss_dssp CEEEECCCCCCCEE-EETTCCEEEEEECE--EESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCeEEeCCCCEE-ecCCCEEEEEEEEE--eeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEE
Confidence 35677766555544 89999999999999 67888999999999997765433 3445566789999999999999999
Q ss_pred EEEcCCcceEEEEEEEEeee
Q psy2166 572 RATNKYGSDVTKASLKCVSK 591 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~ 591 (805)
.|.|..|.....+.|.|..+
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 80 VAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEEETTEEEEEEEEEEEECC
T ss_pred EEEcCCCeEEEEEEEEEEec
Confidence 99999999999999998764
No 444
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.49 E-value=2.3e-13 Score=113.56 Aligned_cols=93 Identities=26% Similarity=0.464 Sum_probs=79.6
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCC-ceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGS-RFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
+|.|...+. ...+.+|+.++|.|.+. +.|.+.|.|+|++..+.... ++.+..+++.++|.|.+++.+|+|.|+|.|
T Consensus 5 ~P~~~~~~~-~~~v~~G~~v~l~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (99)
T 1u2h_A 5 PPTFKVSLM-DQSVREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKA 81 (99)
T ss_dssp EEEEEECCC-CEEEETTCCEEEEEEEE--EESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEcCC-ceEecCCCEEEEEEEEE--EcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEE
Confidence 566666554 67899999999999998 67888999999999987664 566666777789999999999999999999
Q ss_pred EeCCeeEEEEEEEEEec
Q psy2166 144 WNLAGETFTSTTIYCST 160 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~ 160 (805)
.|..|.....+.|.|..
T Consensus 82 ~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 82 VNEYGARQCEARLEVRG 98 (99)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCceeEEEEEEEEC
Confidence 99999998888888864
No 445
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.49 E-value=1.4e-13 Score=113.65 Aligned_cols=88 Identities=20% Similarity=0.297 Sum_probs=79.8
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
..|.|...+.+. .+.+|+.+.|.|.+ +.|.+.|.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|
T Consensus 7 ~~~~~~~~~~~~-~v~~G~~v~l~C~~---~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 7 PVSAFSKKPRSV-EVAAGSPAVFEAET---ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCCCSBCCCCE-EEETTSCEEEEEEC---SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CCCeeEeCCCcE-EEeCCCcEEEEEEe---CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 457888888888 99999999999998 67889999999999999888999888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEE
Q psy2166 770 TNKWGQAEISVNLECV 785 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~ 785 (805)
|....+++|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 ----GSSKVKFDLKVI 94 (95)
T ss_dssp ----TTEEEEEEEEEE
T ss_pred ----CCceEEEEEEEe
Confidence 778888999885
No 446
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.49 E-value=1.8e-13 Score=136.97 Aligned_cols=178 Identities=17% Similarity=0.225 Sum_probs=109.4
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---c-------------CCCCceEEEec--CcEEEEEEcccccC
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---L-------------ELGSRFKTTAD--FGFVTLDLTEVYDR 134 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---i-------------~~~~~~~~~~~--~~~~~L~I~~~~~~ 134 (805)
.+.+.+|++|+|.|.+.+.......|.|||. +.. + ...+|+.+..+ .+.++|.|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 5789999999999999732223568999973 211 1 11357777644 35778999999999
Q ss_pred CCeEEEEEEEeCC-----e-e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCcee
Q psy2166 135 DQGIYTCRAWNLA-----G-E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFT 206 (805)
Q Consensus 135 D~G~Y~C~a~n~~-----g-~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 206 (805)
|+|.|.|.+.+.. + . ....+.|.|.... ..+|.+.
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~-------------------------------------~~~P~v~ 131 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS-------------------------------------TKGPSVF 131 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC-------------------------------------CBCCEEE
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEeccc-------------------------------------CCCCEEE
Confidence 9999999998763 1 1 1122356654211 1335544
Q ss_pred cccccccccCCCceEEEEEEEeeCCCC-CeEEEEEECCEEccCCCcE--EEEEEcC----eEEEEEcCCCCcccEEEEEE
Q psy2166 207 SEFQHLSNLSEGEIAHFEASLIPVGDQ-TMTVEFLYNGKPIEASHRI--RTVHAFG----MVVLEILGTKIEDTGVYTCR 279 (805)
Q Consensus 207 ~~~~~~~~v~~g~~~~l~C~~~~~~~p-~~~i~W~k~g~~l~~~~~~--~~~~~~~----~~~L~i~~~~~~d~G~Y~C~ 279 (805)
...... .+.+|+.++|.|.+... +| .+.+.| ++..+...... .....++ .+.|.|.....+| |.|+|.
T Consensus 132 ~~~~~~-~~~~g~~~~L~C~~~~~-~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~ 206 (263)
T 3iu4_H 132 PLAPSS-KGSTSGTAALGCLVKDY-FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICN 206 (263)
T ss_dssp EECCCC-CC----EEEEEEEEEEE-BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEE
T ss_pred EccCcc-ccccCCcEEEEEEEEeE-eCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEE
Confidence 222222 25589999999998642 34 478999 55443221100 0011111 2478898888889 999999
Q ss_pred EEcCCeeEEEEEEEE
Q psy2166 280 ATNKWGQAEISVNLE 294 (805)
Q Consensus 280 ~~n~~g~~~~~~~l~ 294 (805)
+.|..+.......+.
T Consensus 207 v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 207 VNHKPSNTKVDKKVE 221 (263)
T ss_dssp EEEGGGTEEEEEECC
T ss_pred EEECCCCcceeEEEc
Confidence 999877655544443
No 447
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.49 E-value=2.3e-13 Score=134.91 Aligned_cols=180 Identities=11% Similarity=0.130 Sum_probs=111.9
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CE---Ec--------------cCCCceEEEEe--CcEEEEEEcccCcCCc
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GK---PI--------------FHKNRVKMVSD--FGFVVMDIAYVQSHDS 374 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~---~l--------------~~~~~~~~~~~--~~~~~l~i~~v~~~d~ 374 (805)
+.+|+.++|.|.+.+...+...+.|+|. +. .+ ....++.+..+ .....|+|.+++.+|+
T Consensus 11 v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 90 (248)
T 3u2s_H 11 VQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVEDT 90 (248)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHHHC
Confidence 7899999999999732234568999973 21 11 01256666554 4667899999999999
Q ss_pred eEEEEEEEeCce----------------------eeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCc
Q psy2166 375 GEYVCRAWNKYG----------------------EDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAP 432 (805)
Q Consensus 375 G~Y~C~a~n~~g----------------------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 432 (805)
|.|.|.+.+..+ .......|.|..
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~---------------------------------- 136 (248)
T 3u2s_H 91 ATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS---------------------------------- 136 (248)
T ss_dssp EEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS----------------------------------
T ss_pred EEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc----------------------------------
Confidence 999999986421 011112333321
Q ss_pred ccCCCceeeeecceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCC
Q psy2166 433 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQ 512 (805)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~ 512 (805)
....+|.+....+... +..|+
T Consensus 137 ----------------------------------------------------------~~~~~P~v~~~~~~~~-~~~g~ 157 (248)
T 3u2s_H 137 ----------------------------------------------------------ASTKGPSVFPLAPSSK-STSGG 157 (248)
T ss_dssp ----------------------------------------------------------CCCBCCEEEEECCC-------C
T ss_pred ----------------------------------------------------------cCCCCCEEEEeCCCcc-ccCCC
Confidence 1134566654444333 56799
Q ss_pred eEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEe-eCC---EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEE
Q psy2166 513 SAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFH-DFG---IVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 588 (805)
Q Consensus 513 ~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 588 (805)
.++|.|.+.+..++.+.++|+++|..+.......... ++. .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 158 ~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 158 TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred cEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 9999999997433367899999986432110000111 111 2358888888888 9999999999887776665554
Q ss_pred e
Q psy2166 589 V 589 (805)
Q Consensus 589 ~ 589 (805)
.
T Consensus 237 ~ 237 (248)
T 3u2s_H 237 K 237 (248)
T ss_dssp -
T ss_pred C
Confidence 3
No 448
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.48 E-value=4.3e-13 Score=115.33 Aligned_cols=99 Identities=30% Similarity=0.385 Sum_probs=84.3
Q ss_pred CCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCC-CCceEEEecC-cEEEEEEcccccCCCeE
Q psy2166 61 ETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLEL-GSRFKTTADF-GFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 61 ~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~-~~~~~~~~~~-~~~~L~I~~~~~~D~G~ 138 (805)
....+|.|+..+. ++.+.+|+.++|.|.+. |.|.+.|.|+|++..+.. ..++.+..++ +.++|.|.+++.+|+|.
T Consensus 11 ~~~~~p~f~~~p~-~~~v~~G~~v~L~C~~~--g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (116)
T 2kkq_A 11 EHKRAPMFIYKPQ-SKKVLEGDSVKLECQIS--AIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGW 87 (116)
T ss_dssp CCCBCCCBSSCCC-CEEEETTEEEEEEEEBC--CBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEE
T ss_pred CCCCCCeEEeCCC-cEEEeCCCcEEEEEEEe--ccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEE
Confidence 3455678876665 68999999999999998 688889999999999885 4678776654 56689999999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEeccc
Q psy2166 139 YTCRAWNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 139 Y~C~a~n~~g~~~~~~~l~V~~~~ 162 (805)
|+|.|.|..|.....+.|.|..++
T Consensus 88 Y~C~a~N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 88 YTVSAVNEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCS
T ss_pred EEEEEEcCCCeEEEEEEEEEeCCC
Confidence 999999999999999999998755
No 449
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=9.9e-14 Score=116.74 Aligned_cols=93 Identities=23% Similarity=0.222 Sum_probs=84.2
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+.+.|.|. . +.|.+.|+|+|+|..+..+.++.+..+++...|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~-~v~~G~~v~l~C~-~--~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~- 81 (103)
T 2dku_A 7 GANCFTEELTNL-QVEEKGTAVFTCK-T--EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD- 81 (103)
T ss_dssp CCCCCSSCCCCE-EEETTSEEEEEEE-C--SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE-
T ss_pred CCCEeEecCCcE-EEeCCCcEEEEEE-e--CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE-
Confidence 688999889888 9999999999999 4 8899999999999999999999888888888999999999999999998
Q ss_pred EcCCccEEEEEEEEEEEeCCC
Q psy2166 770 TNKWGQAEISVNLECVVWSPS 790 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~~~ 790 (805)
+|....+++|.|...|.+
T Consensus 82 ---~g~~~~~~~l~V~~~p~~ 99 (103)
T 2dku_A 82 ---IGQAQSRAQLLVQGRRSG 99 (103)
T ss_dssp ---CSSCBCCEEEEEECSCCC
T ss_pred ---eCCceEEEEEEEeCccCC
Confidence 688888999999875544
No 450
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.47 E-value=5.3e-14 Score=118.40 Aligned_cols=95 Identities=19% Similarity=0.363 Sum_probs=84.6
Q ss_pred CCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 689 GRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 689 ~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
..||.|...+.+. .+.+|+.+.|.|.+. |.|.+ |.|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~~--~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 6 SGPVRFQEALKDL-EVLEGGAATLRCVLS--SVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp CCCCCCTBCCCCE-EEESSSCEEEEEECS--SCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE
T ss_pred CCCCEEEecCccE-EEECCCcEEEEEEEe--CCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE
Confidence 3688898888888 999999999999998 88988 9999999999988899988888888999999999999999998
Q ss_pred EEcCCccEEEEEEEEEEEeCCCc
Q psy2166 769 ATNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
+|....++.|.|...|..+
T Consensus 82 ----~g~~~~~~~l~V~~~p~~~ 100 (103)
T 2e7b_A 82 ----FGDQTTSATLTVTALPSGP 100 (103)
T ss_dssp ----CSSCBCCBCEEEECCCCCS
T ss_pred ----ECCcEEEEEEEEEeccccc
Confidence 6778888999998755443
No 451
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.47 E-value=3.1e-13 Score=132.19 Aligned_cols=177 Identities=16% Similarity=0.206 Sum_probs=111.5
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---c--------------CCCCceEEEecC--cEEEEEEccccc
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---L--------------ELGSRFKTTADF--GFVTLDLTEVYD 133 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---i--------------~~~~~~~~~~~~--~~~~L~I~~~~~ 133 (805)
.+.+.+|++|+|.|.+.+...+...+.|+|. +.. + ...+|+.+..+. +.++|.|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 5789999999999999742234568999983 211 1 112477766543 577899999999
Q ss_pred CCCeEEEEEEEeCCe-------eE--EEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCc
Q psy2166 134 RDQGIYTCRAWNLAG-------ET--FTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQ 204 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g-------~~--~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 204 (805)
+|+|.|.|.+.+..+ .. ...+.|.|.... ..+|.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~-------------------------------------~~~P~ 131 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT-------------------------------------TKGPS 131 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC-------------------------------------CBCCE
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC-------------------------------------CCCCc
Confidence 999999999976421 01 122345553211 13455
Q ss_pred eecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE--EEEEEcC----eEEEEEcCCCCcccEEEEE
Q psy2166 205 FTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI--RTVHAFG----MVVLEILGTKIEDTGVYTC 278 (805)
Q Consensus 205 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~--~~~~~~~----~~~L~i~~~~~~d~G~Y~C 278 (805)
+....+.. .+.+|+.++|.|.+.....+.+.+.| ++..+...... .....++ .+.|.|.....+| |.|+|
T Consensus 132 i~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC 207 (226)
T 3mlr_H 132 VFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 207 (226)
T ss_dssp EEEEEEEE-CSTTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEE
T ss_pred EEEecCcc-cccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEE
Confidence 54322222 25689999999998643323578999 54433221100 0011111 2478899888889 99999
Q ss_pred EEEcCCeeEEEEEE
Q psy2166 279 RATNKWGQAEISVN 292 (805)
Q Consensus 279 ~~~n~~g~~~~~~~ 292 (805)
.+.|..+.......
T Consensus 208 ~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 208 NVNHKPSNTKVDKK 221 (226)
T ss_dssp EEEEGGGTEEEEEE
T ss_pred EEEECCCCcCeEEE
Confidence 99998776554443
No 452
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.47 E-value=3.6e-13 Score=134.30 Aligned_cols=171 Identities=13% Similarity=0.179 Sum_probs=111.0
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--E--E-cc------------CCCceEEEEe-CcEEEEEEcccCcCCceEE
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--K--P-IF------------HKNRVKMVSD-FGFVVMDIAYVQSHDSGEY 377 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~--~-l~------------~~~~~~~~~~-~~~~~l~i~~v~~~d~G~Y 377 (805)
+.+|++++|.|.+. .+.+.+.|+|+. . . +. ...++.+..+ .....|.|.+++.+|+|.|
T Consensus 15 v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y 91 (252)
T 1oga_E 15 RKEGQNVTLSCEQN---LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFY 91 (252)
T ss_dssp EETTCCEEECCEEC---SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEE
T ss_pred EcCCCcEEEEEEeC---CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEE
Confidence 88999999999984 357899999852 1 1 10 1235554432 2345799999999999999
Q ss_pred EEEEEeCc---eeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCce
Q psy2166 378 VCRAWNKY---GEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQS 454 (805)
Q Consensus 378 ~C~a~n~~---g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (805)
.|.+.+.. ........|.|....
T Consensus 92 ~C~~~~~~~~~~~~~~~~~l~V~~~~------------------------------------------------------ 117 (252)
T 1oga_E 92 LCASSSRSSYEQYFGPGTRLTVTEDL------------------------------------------------------ 117 (252)
T ss_dssp EEEEESSTTSCCEECCCEEEEEESCG------------------------------------------------------
T ss_pred EEEEecCCccceeECCCEEEEEeccc------------------------------------------------------
Confidence 99999862 111122345553210
Q ss_pred EEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC-cEEEEE
Q psy2166 455 AHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD-LVVEWF 533 (805)
Q Consensus 455 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~-~~v~W~ 533 (805)
....+|.+....+....+.+|+.++|.|.+.+. .|. +.|+|+
T Consensus 118 ------------------------------------~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~-~P~~~~v~W~ 160 (252)
T 1oga_E 118 ------------------------------------KNVFPPEVAVFEPSEAEISHTQKATLVCLATGF-YPDHVELSWW 160 (252)
T ss_dssp ------------------------------------GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEE-BSSCEEEEEE
T ss_pred ------------------------------------CCCCCCeEEEECCChhhhccCCceEEEEEEeeE-cCCCcEEEEE
Confidence 013467776654443336689999999999952 354 699999
Q ss_pred ECCEEccCCCceE---EE----eeCC----EEEEEEccCCCC-CCEEEEEEEEcCCcce
Q psy2166 534 YNGKKLPHGHRYR---TF----HDFG----IVILDILYCYEE-NSGVYECRATNKYGSD 580 (805)
Q Consensus 534 ~~g~~l~~~~~~~---~~----~~~~----~~~L~i~~v~~~-d~G~Y~C~a~n~~g~~ 580 (805)
|||+.+..+.... .. ..++ .+.|.|...... |.|.|+|.|.|.....
T Consensus 161 ~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~~ 219 (252)
T 1oga_E 161 VNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLSE 219 (252)
T ss_dssp ETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCT
T ss_pred ECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCCC
Confidence 9999986542211 00 1122 234888766554 6789999999976543
No 453
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=1.5e-13 Score=118.85 Aligned_cols=93 Identities=24% Similarity=0.210 Sum_probs=74.1
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeC----cEEEEEEcCCCCCCCEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF----GMVVLEILGTKIEDTGVY 765 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y 765 (805)
.||.|...... .+ .+...|.|.+. |+|.|.++|+|+|+.+..+.+..+.... ....|.|.++..+|+|.|
T Consensus 7 ~pP~i~~~~~~--~~--~~~~~l~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 80 (118)
T 1wwc_A 7 YPPRVVSLEEP--EL--RLEHCIEFVVR--GNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNY 80 (118)
T ss_dssp CCCCCCCCCCC--CC--CCEEEEEEEEE--CSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEE
T ss_pred cCCceeccCCC--ee--ccceEEEEEee--eeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEE
Confidence 46666554222 22 36688999999 9999999999999999988776654322 345899999999999999
Q ss_pred EEEEEcCCccEEEEEEEEEEEeC
Q psy2166 766 TCRATNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 766 ~C~a~N~~G~~~~~~~l~V~~~~ 788 (805)
+|.|.|.+|..+.++.|.|...|
T Consensus 81 ~C~a~N~~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 81 TLIAKNPLGTANQTINGHFLKEP 103 (118)
T ss_dssp EEEEEETTEEEEEEEEECCSCCC
T ss_pred EEEEECCCCeEeeEEEEEEccCC
Confidence 99999999999999998886543
No 454
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.47 E-value=4.8e-13 Score=141.69 Aligned_cols=182 Identities=13% Similarity=0.133 Sum_probs=114.3
Q ss_pred CeEEecCCCCce-ecCCCcEEEEEEEecCC-CC-CceEEEEECCEecCCCCc--eEEEecC---cEEEEEEcccccCCCe
Q psy2166 66 PVFIVPLKPEFK-LGEAQPLHLEAQVEPKN-DP-NLKIEWIFNGKPLELGSR--FKTTADF---GFVTLDLTEVYDRDQG 137 (805)
Q Consensus 66 p~~~~~~~~~~~-v~~G~~v~L~C~~~~~~-~p-~~~v~W~k~g~~i~~~~~--~~~~~~~---~~~~L~I~~~~~~D~G 137 (805)
|.+.+..+.... +..|+.++|.|.+.+.. .| ...|+|+|++..+..... .....++ ....|.|..++.+|+|
T Consensus 167 p~v~~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g 246 (376)
T 2aty_A 167 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGK 246 (376)
T ss_pred cEEEEeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCC
Confidence 333333333344 78999999999998431 13 347999999876542211 0001111 2347999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCceecccccccccCC
Q psy2166 138 IYTCRAWNLAGETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQFTSEFQHLSNLSE 217 (805)
Q Consensus 138 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~ 217 (805)
.|+|.+.+..+.......+.+.. ....+|.+...+.... ..+
T Consensus 247 ~Y~C~~~~~~~~~~~~~~v~~~~-------------------------------------~~~~~P~v~v~~~~~~-~~~ 288 (376)
T 2aty_A 247 EFKCRVNSAAFPAPIEKTISKTK-------------------------------------GRPKAPQLYTIPPPKE-QMA 288 (376)
T ss_pred EEEEEEecCCCCCceEEEEcCCC-------------------------------------CCCcCCeEEeeCCCHH-Hhc
Confidence 99999998765433222232100 0114566665555442 446
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE-EEEcC----eEEEEEcCCCCcccEEEEEEEEcCCe
Q psy2166 218 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-VHAFG----MVVLEILGTKIEDTGVYTCRATNKWG 285 (805)
Q Consensus 218 g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~~~-~~~~~----~~~L~i~~~~~~d~G~Y~C~~~n~~g 285 (805)
|+.++|.|.+.....+.++|+|+|+|..+........ ...++ .+.|.|.....+|.|.|+|.|.|...
T Consensus 289 g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 289 KDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 8999999999532234679999999998754322111 12222 24677877777889999999998754
No 455
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.47 E-value=4.8e-13 Score=128.65 Aligned_cols=166 Identities=15% Similarity=0.137 Sum_probs=105.9
Q ss_pred CCCCceecCCCcEEEEEEEecCCCCCceEEEEECC--Ee---c-------CCCCceEEEec---CcEEEEEEcccccCCC
Q psy2166 72 LKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNG--KP---L-------ELGSRFKTTAD---FGFVTLDLTEVYDRDQ 136 (805)
Q Consensus 72 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g--~~---i-------~~~~~~~~~~~---~~~~~L~I~~~~~~D~ 136 (805)
.+..+.+.+|+.++|.|.+.. .+ +.|.|+|.. .. + ...+|+.+..+ .+..+|.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~--~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 7 SPSALSLHEGTDSALRCNFTT--TM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp SCSEEEEETTCCEEEEEEESS--CC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred CCCeEEEccCCcEEEEEEEeC--CC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 344678999999999999983 33 479999842 21 1 13468887765 5678999999999999
Q ss_pred eEEEEEEEeCCe---------e--EEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCCCce
Q psy2166 137 GIYTCRAWNLAG---------E--TFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRPPQF 205 (805)
Q Consensus 137 G~Y~C~a~n~~g---------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 205 (805)
|.|.|.+.+..+ . ....+.|.|..... ...+|.+
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~-----------------------------------~~~~P~v 128 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ-----------------------------------PPAKPSV 128 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC-----------------------------------CCCCCEE
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCCC-----------------------------------CCCCCeE
Confidence 999999988632 1 11235677653210 0123433
Q ss_pred ecccccccccCCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEEEcCeEEEEEcCCCCcccEEEEEEEEcCC
Q psy2166 206 TSEFQHLSNLSEGEIAHFEASLIPVGDQT-MTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 284 (805)
Q Consensus 206 ~~~~~~~~~v~~g~~~~l~C~~~~~~~p~-~~i~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 284 (805)
... .+ .++|.|.+.. ..|. +.+.|+++ ..+...........++...+. .....+|.|.|+|.+.|..
T Consensus 129 ~~~--------~~-~~~l~C~~~g-~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~-~~~~~~~~~~ytC~v~~~~ 196 (207)
T 1ypz_E 129 FIM--------KN-GTNVACLVKD-FYPKEVTISLRSS-KKIVEFDPAIVISPSGKYSAV-KLGQYGDSNSVTCSVQHNS 196 (207)
T ss_dssp EEE--------EE-TTEEEEEEEE-ESSSCCEEEEECS-SEEEECCCEEEECTTSSEEEE-ECEEESSTTTCEEEEEETT
T ss_pred EEe--------CC-CCeEEEEEee-EeCCCeEEEEecC-CcccCCccceEEcCCCcEEEE-EeecccCCCcEEEEEEECC
Confidence 321 11 2689999853 3454 79999999 666543222112233444443 2233367899999999987
Q ss_pred eeE
Q psy2166 285 GQA 287 (805)
Q Consensus 285 g~~ 287 (805)
+..
T Consensus 197 ~~~ 199 (207)
T 1ypz_E 197 ETV 199 (207)
T ss_dssp EEE
T ss_pred ccE
Confidence 643
No 456
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.47 E-value=1.4e-13 Score=135.05 Aligned_cols=174 Identities=10% Similarity=0.148 Sum_probs=108.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--EE---cc-------------CCCceEEEEeC--cEEEEEEcccCcCCce
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--KP---IF-------------HKNRVKMVSDF--GFVVMDIAYVQSHDSG 375 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~~---l~-------------~~~~~~~~~~~--~~~~l~i~~v~~~d~G 375 (805)
+.+|++++|.|.+.+...+.+.+.|+|.. .. +. ...++.+..+. +...|.|.+++.+|+|
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 92 (230)
T 1ypz_F 13 RPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEA 92 (230)
T ss_dssp EETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGCS
T ss_pred EeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhCE
Confidence 78999999999997311256789999842 11 10 13456655432 5678999999999999
Q ss_pred EEEEEEEeC--cee--eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecC
Q psy2166 376 EYVCRAWNK--YGE--DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKE 451 (805)
Q Consensus 376 ~Y~C~a~n~--~g~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (805)
.|.|.+.+. ... ....+.|.|..+..
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~-------------------------------------------------- 122 (230)
T 1ypz_F 93 IYYCSYGEGSSGFHKVFAEGTKLIVIPSDK-------------------------------------------------- 122 (230)
T ss_dssp EEEEEECCTTTCCCCEECSCEEEEEECCCT--------------------------------------------------
T ss_pred EEEEEEECCCCCcccccCCCEEEEEecccc--------------------------------------------------
Confidence 999999874 111 11234566541100
Q ss_pred CceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC-CcEE
Q psy2166 452 GQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP-DLVV 530 (805)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p-~~~v 530 (805)
.+....+|...+..+....+.+|+.++|.|.+.++ .| ++.|
T Consensus 123 -------------------------------------~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~-~P~~~~v 164 (230)
T 1ypz_F 123 -------------------------------------RLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAF-FPDVIRV 164 (230)
T ss_dssp -------------------------------------TCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEE-SSCCCEE
T ss_pred -------------------------------------cCcccCCCCceEECCCchhhccCCcceEEEEEeee-cCCCeEE
Confidence 00000122222222222336779999999999963 35 4699
Q ss_pred EEEE-CCEEccCCCceEEEeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 531 EWFY-NGKKLPHGHRYRTFHDFG----IVILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 531 ~W~~-~g~~l~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
+|++ ||+.+..+....+...++ .+.|.|..... | |.|+|.|.|..+.
T Consensus 165 ~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 165 YWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp EEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred EEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 9999 888775331111122232 24689987765 4 9999999998765
No 457
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.47 E-value=2.4e-14 Score=138.83 Aligned_cols=179 Identities=16% Similarity=0.148 Sum_probs=109.5
Q ss_pred CeEEecCCCcccccCCCeEEEEEEEeecCCCC---cEEEEEECCEEccCCC-ceEE-EEe---CcEEEEEEcccCcCCce
Q psy2166 304 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE---LKVEWFHNGKPIFHKN-RVKM-VSD---FGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 304 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~p~---~~v~W~~~g~~l~~~~-~~~~-~~~---~~~~~l~i~~v~~~d~G 375 (805)
|.+....+....+.+|+.++|.|.+. +.+. +.|.| ++..+.... .... ..+ .....|.|.++..+|+|
T Consensus 4 p~v~~~~P~~~~v~~G~~v~L~C~~~--g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g 79 (214)
T 1ow0_A 4 PRLSLHRPALEDLLLGSEANLTCTLT--GLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGK 79 (214)
T ss_dssp CCCEEECCCHHHHHHCSSCCCEEEET--TCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTC
T ss_pred CEEEEECcChHHhccCCCcEEEEEEe--eeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCC
Confidence 44433333333378999999999997 5432 68999 444432110 0000 000 02346889999999999
Q ss_pred EEEEEEEeCceeeEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecceeeecCCceE
Q psy2166 376 EYVCRAWNKYGEDFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSA 455 (805)
Q Consensus 376 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (805)
.|+|.+.|..+.......+.+
T Consensus 80 ~Y~C~~~~~~~~~~~~~~i~~----------------------------------------------------------- 100 (214)
T 1ow0_A 80 TFTCTAAYPESKTPLTATLSK----------------------------------------------------------- 100 (214)
T ss_dssp EEEEEECCSSCSSCEEEEEEC-----------------------------------------------------------
T ss_pred eEEEEEecCCCCCceeEeecc-----------------------------------------------------------
Confidence 999999988764322222211
Q ss_pred EEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEEC
Q psy2166 456 HFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYN 535 (805)
Q Consensus 456 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~ 535 (805)
..+..+|.+.+..+....+..|+.++|.|.+.++.++.+.|+|+||
T Consensus 101 ----------------------------------~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~ 146 (214)
T 1ow0_A 101 ----------------------------------SGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQG 146 (214)
T ss_dssp ----------------------------------CSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEET
T ss_pred ----------------------------------CCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEEC
Confidence 0124567776554433347889999999999963233469999999
Q ss_pred CEEccCCCc----eEEE---eeCCE---EEEEEccCCCCCCEEEEEEEEcCCcc
Q psy2166 536 GKKLPHGHR----YRTF---HDFGI---VILDILYCYEENSGVYECRATNKYGS 579 (805)
Q Consensus 536 g~~l~~~~~----~~~~---~~~~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~ 579 (805)
|..+..+.. .... .++.. +.|.|.....+|.|.|+|.|.|....
T Consensus 147 g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 147 SQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp TEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred CEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 999865421 1212 22222 23555544335689999999997643
No 458
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=1.7e-13 Score=114.92 Aligned_cols=91 Identities=21% Similarity=0.319 Sum_probs=79.2
Q ss_pred CCCCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCC-CCeEEEeeCcEEEEEEcCCCCCCCEEEE
Q psy2166 688 DGRPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS-HRIRTVHAFGMVVLEILGTKIEDTGVYT 766 (805)
Q Consensus 688 ~~~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 766 (805)
...+|.|...+.+.+.+.+|+++.|.|.+ +.|.+.|+|+|+|+.+..+ .++.+..+++...|.|.++..+|+|.|+
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~---~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL---ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC---SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEE
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE---cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEE
Confidence 34788998888873389999999999998 5788999999999999887 7888888888889999999999999999
Q ss_pred EEEEcCCccEEEEEEEEEE
Q psy2166 767 CRATNKWGQAEISVNLECV 785 (805)
Q Consensus 767 C~a~N~~G~~~~~~~l~V~ 785 (805)
|.| |....+++|.|+
T Consensus 89 C~a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 89 CVV----GGEKCSTELFVK 103 (104)
T ss_dssp EEE----TTEEECCEEEEE
T ss_pred EEE----CCCcEEEEEEEe
Confidence 999 557777888875
No 459
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.46 E-value=1.6e-13 Score=116.65 Aligned_cols=93 Identities=20% Similarity=0.283 Sum_probs=82.0
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.||.|...+.+. .+.+|+.++|.|.+. +. |.|.|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|.|
T Consensus 7 ~pp~~~~~~~~~-~v~~G~~v~l~C~~~--~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 81 (108)
T 2dm7_A 7 GPARFTQDLKTK-EASEGATATLQCELS--KV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMC 81 (108)
T ss_dssp CCCCBCSCCBCC-EEETTSCEEEEEEBS--SS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEE
T ss_pred CCCeeeecCCcE-EEeCCCcEEEEEEeC--CC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 689998888888 999999999999987 65 6899999999999889999888888889999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeCCCc
Q psy2166 770 TNKWGQAEISVNLECVVWSPSQ 791 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~~~~ 791 (805)
.| ...++.|.|...|+.+
T Consensus 82 ~n----~~~~~~l~V~~~p~~~ 99 (108)
T 2dm7_A 82 GQ----ERTSATLTVRALPARF 99 (108)
T ss_dssp TT----EEEEEECEEECCCSSC
T ss_pred cC----CEEEEEEEEecCCHHH
Confidence 44 7888899998766543
No 460
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=8.8e-15 Score=125.93 Aligned_cols=92 Identities=18% Similarity=0.286 Sum_probs=80.4
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEE-eeCcEEEEEEcCCCCCCCEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTV-HAFGMVVLEILGTKIEDTGVYTCR 768 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~ 768 (805)
.|+.|...+.+. .+.+|+.++|.|.+. |.|.|.|+|+|||..+..+.++.+. .+++...|.|.++..+|+|.|+|.
T Consensus 12 ~p~~~~~~~~~~-~v~~G~~v~l~C~~~--g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (115)
T 2cr6_A 12 RRVHIIEDLEDV-DVQEGSSATFRCRIS--PANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE 88 (115)
T ss_dssp SCCEEEECCCEE-EEETTSCEECCCEEE--STTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE
T ss_pred CCCeEeccCccE-EEeCCCcEEEEEEEc--CCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE
Confidence 456888888888 999999999999999 9999999999999999988887765 345667899999999999999999
Q ss_pred EEcCCccEEEEEEEEEEEeC
Q psy2166 769 ATNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 769 a~N~~G~~~~~~~l~V~~~~ 788 (805)
| |....++.|+|...|
T Consensus 89 ~----g~~~~~~~L~V~~~p 104 (115)
T 2cr6_A 89 A----GDQRASAALRVTEKP 104 (115)
T ss_dssp E----TTEECCEEEEEECCS
T ss_pred E----CCeeEEEEEEEECCC
Confidence 4 888889999998644
No 461
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.46 E-value=4.2e-13 Score=112.05 Aligned_cols=92 Identities=17% Similarity=0.343 Sum_probs=80.9
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
.+|.|+..+.+.+.+.+|+.++|.|.+. .|.+.|.|+|||..+..+.++.+..++...+|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~---~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA---DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES---CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec---CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 4788887777557899999999999997 5788999999999999888999998888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEeccc
Q psy2166 144 WNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V~~~~ 162 (805)
|.....+.|.|..++
T Consensus 83 ----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ----GDEKCSTELFVRSGP 97 (100)
T ss_dssp ----TTEEEEEEEEECCSC
T ss_pred ----CCceEEEEEEEecCC
Confidence 667778888887654
No 462
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.46 E-value=1.1e-12 Score=128.77 Aligned_cols=178 Identities=15% Similarity=0.220 Sum_probs=116.2
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--E---Ec--------------cCCCceEEEEeC--cEEEEEEcccCcCCc
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--K---PI--------------FHKNRVKMVSDF--GFVVMDIAYVQSHDS 374 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~---~l--------------~~~~~~~~~~~~--~~~~l~i~~v~~~d~ 374 (805)
+.+|+.++|.|.+.+.......+.|+|.. . .+ ....++.+..+. ....|+|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (230)
T 3n9g_H 12 RKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSEDT 91 (230)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhhC
Confidence 78999999999997322345679999731 1 11 012466665543 567899999999999
Q ss_pred eEEEEEEEeCc-----eee---EEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecce
Q psy2166 375 GEYVCRAWNKY-----GED---FTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDV 446 (805)
Q Consensus 375 G~Y~C~a~n~~-----g~~---~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (805)
|.|.|.+.+.. +.. ...+.|.|...
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~----------------------------------------------- 124 (230)
T 3n9g_H 92 AVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSA----------------------------------------------- 124 (230)
T ss_dssp EEEEEEEECCCSSSTTCCEEEECCCEEEEECSS-----------------------------------------------
T ss_pred EEEEEEEccCCCCcccccccccCCCEEEEEEec-----------------------------------------------
Confidence 99999998753 111 12234544211
Q ss_pred eeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCC
Q psy2166 447 TQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDP 526 (805)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p 526 (805)
...+|.+....+... +.+|+.++|.|.+.+..++
T Consensus 125 ---------------------------------------------~~~~P~v~~~~~~~~-~~~g~~v~L~C~~~~~~P~ 158 (230)
T 3n9g_H 125 ---------------------------------------------STKGPSVFPLAPSSK-STSGGTAALGCLVKDYFPE 158 (230)
T ss_dssp ---------------------------------------------CCBCCEEEEECCCCC-CCTTCEEEEEEEEEEEBSS
T ss_pred ---------------------------------------------CCCCCEEEecCCCcc-ccCCCCEEEEEEEEeEECC
Confidence 134566654333333 5689999999999974333
Q ss_pred CcEEEEEECCEEccCCCce--EEEeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 527 DLVVEWFYNGKKLPHGHRY--RTFHDFG----IVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 527 ~~~v~W~~~g~~l~~~~~~--~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
.+.++| +|..+..+... .....++ .+.|.|.....+| |.|+|.|.|..+.......|.|.
T Consensus 159 ~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 159 PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred CEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 678999 66555321100 0111111 2469999988889 99999999998887777666654
No 463
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.46 E-value=3.6e-13 Score=110.24 Aligned_cols=84 Identities=15% Similarity=0.227 Sum_probs=71.7
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.++.|...|.+. .+.+|+.+.|.|.+. |+|.|.+.|+|+|..+....+ + .|.|.++..+|+|.|+|.|
T Consensus 2 ~~~~i~~~p~~~-~v~~G~~~~l~C~~~--g~p~p~i~W~~~~~~~~~~~~-------~--~L~i~~v~~~d~G~Y~C~a 69 (91)
T 3bfo_A 2 SKLQICVEPTSQ-KLMPGSTLVLQCVAV--GSPIPHYQWFKNELPLTHETK-------K--LYMVPYVDLEHQGTYWCHV 69 (91)
T ss_dssp CCCEEEECCCCE-EECTTSCEEEECEEE--CSSCCEEEEEETTEECTTCCS-------S--EEEESSCCGGGCEEEEEEE
T ss_pred CceEEEECCCcc-EecCCCcEEEEEEec--cCCCCEEEEEcCCeeCCcCCC-------C--eEEECCCCHHhCEEEEEEE
Confidence 467788888888 899999999999998 999999999999998876543 2 6999999999999999999
Q ss_pred EcCCccEE-EEEEEEEE
Q psy2166 770 TNKWGQAE-ISVNLECV 785 (805)
Q Consensus 770 ~N~~G~~~-~~~~l~V~ 785 (805)
.|..|... ..+.|.|.
T Consensus 70 ~n~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 70 YNDRDSQDSKKVEIIID 86 (91)
T ss_dssp ECSSCEEECCCEEEEEC
T ss_pred EcCCCCEEeeeEEEEEe
Confidence 99999654 44666663
No 464
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.46 E-value=4.4e-13 Score=133.97 Aligned_cols=180 Identities=16% Similarity=0.203 Sum_probs=111.9
Q ss_pred CceecCCCcEEEEEEEecCCCCCceEEEEEC--CEe---c--------------CCCCceEEEec--CcEEEEEEccccc
Q psy2166 75 EFKLGEAQPLHLEAQVEPKNDPNLKIEWIFN--GKP---L--------------ELGSRFKTTAD--FGFVTLDLTEVYD 133 (805)
Q Consensus 75 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~--g~~---i--------------~~~~~~~~~~~--~~~~~L~I~~~~~ 133 (805)
.+.+.+|++|+|.|.+.+.......+.|+|. +.. + ...+|+.+..+ .+.++|+|.+++.
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (256)
T 3sob_H 32 GGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRA 111 (256)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCc
Confidence 5689999999999999742233568999973 211 1 12357776654 3577899999999
Q ss_pred CCCeEEEEEEEeCCe-----------eEEEEEEEEEeccccccccccCCCCcchhhhhHhhhhhhcCCCCCCCCCCCCCC
Q psy2166 134 RDQGIYTCRAWNLAG-----------ETFTSTTIYCSTKESLIERTQHPKGEEGLEKIQDLEESLRRQPAGVPDSEDGRP 202 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g-----------~~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (805)
+|+|.|.|.+.+..+ .......|.|.... ..+
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~-------------------------------------~~~ 154 (256)
T 3sob_H 112 EDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAS-------------------------------------TKG 154 (256)
T ss_dssp GGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSC-------------------------------------CBC
T ss_pred ccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCC-------------------------------------CCC
Confidence 999999999987421 11223456664311 133
Q ss_pred CceecccccccccCCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE--EEEEEcC----eEEEEEcCCCCcccEEE
Q psy2166 203 PQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI--RTVHAFG----MVVLEILGTKIEDTGVY 276 (805)
Q Consensus 203 p~~~~~~~~~~~v~~g~~~~l~C~~~~~~~p~~~i~W~k~g~~l~~~~~~--~~~~~~~----~~~L~i~~~~~~d~G~Y 276 (805)
|.+....+.. .+.+|+.++|.|.+.....+.+.+.| ++..+...... .....++ .+.|.|.....+| |.|
T Consensus 155 P~i~~~~~~~-~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~y 230 (256)
T 3sob_H 155 PSVFPLAPSS-KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 230 (256)
T ss_dssp CEEEEECCC------TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCC
T ss_pred CEEEEECCCc-ccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceE
Confidence 5444322222 25689999999998643322578999 55544321100 0011111 2478899988899 999
Q ss_pred EEEEEcCCeeEEEEEEEEE
Q psy2166 277 TCRATNKWGQAEISVNLEC 295 (805)
Q Consensus 277 ~C~~~n~~g~~~~~~~l~v 295 (805)
+|.+.|..+.......+.+
T Consensus 231 tC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 231 ICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp EEEEEEGGGTEEEEEECCC
T ss_pred EEEEEeCCCCcceEEEecc
Confidence 9999998776665555543
No 465
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=9.1e-14 Score=115.82 Aligned_cols=85 Identities=19% Similarity=0.349 Sum_probs=72.9
Q ss_pred CCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEE
Q psy2166 698 FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 777 (805)
Q Consensus 698 ~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 777 (805)
+.+. .+.+|+.++|.|.+. |.| |.|.|+|+|..+....++.+. ++ .|.|.++..+|+|.|+|.|.|..|...
T Consensus 10 p~~~-~v~~G~~v~L~C~~~--g~p-p~i~W~k~g~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 81 (99)
T 2cr3_A 10 VESF-LVHPGDLLQLRCRLR--DDV-QSINWLRDGVQLAESNRTRIT--GE--EVEVQDSVPADSGLYACVTSSPSGSDT 81 (99)
T ss_dssp EEEC-CBCTTSCEEEECCCC--SSC-CEEEEEESSSBCCCCSSEEEC--SS--EEEETTCCTTTCEEEEEEEEETTEEEE
T ss_pred CcCe-EEeCCCcEEEEEEec--CCC-CeEEEEECCEECCCCCcEEEE--CC--EEEEccCCHHHCEEEEEEEEeCCceEE
Confidence 4455 899999999999998 877 799999999998877776654 33 799999999999999999999999999
Q ss_pred EEEEEEEEEeCCC
Q psy2166 778 ISVNLECVVWSPS 790 (805)
Q Consensus 778 ~~~~l~V~~~~~~ 790 (805)
..+.|.|...+++
T Consensus 82 ~~~~l~V~~~~~s 94 (99)
T 2cr3_A 82 TYFSVNVSDALPS 94 (99)
T ss_dssp EEEEECBCSCCSC
T ss_pred EEEEEEEecCCCC
Confidence 9988888765544
No 466
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.46 E-value=1.1e-13 Score=116.71 Aligned_cols=95 Identities=17% Similarity=0.273 Sum_probs=83.5
Q ss_pred CcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 62 TFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 62 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
...+|.|+..+. .+.+.+|+.++|.|.+. |.|.+.|.|+|+|..+..+.++.+...+...+|.|.+++.+|+|.|+|
T Consensus 11 ~~~~~~i~~~p~-~~~v~~G~~v~L~C~~~--g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 87 (106)
T 1nct_A 11 TTLAARILTKPR-SMTVYEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSV 87 (106)
T ss_dssp SSCCCEEEECCC-CEEESSSSCEECCEEEE--CSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEE
T ss_pred CCCCCEEEECCC-CEEEeCCCcEEEEEEEE--EcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEE
Confidence 345677766555 78999999999999998 688899999999999998889988887777899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEe
Q psy2166 142 RAWNLAGETFTSTTIYCS 159 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~ 159 (805)
.|.|..|.....+.|.|+
T Consensus 88 ~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 88 VVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CCBCSSCBCCEEEEEEEC
T ss_pred EEEeCCCeEEEEEEEEEE
Confidence 999999998888888874
No 467
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=1.6e-13 Score=116.96 Aligned_cols=98 Identities=22% Similarity=0.366 Sum_probs=83.2
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccC-CCceEEEee-CCEEEEEEccCCCCCCEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPH-GHRYRTFHD-FGIVILDILYCYEENSGVYE 570 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~-~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~ 570 (805)
..+|.|...+.... +.+|+.++|.|.+. |.|.+.++|+|+|..+.. ..++.+..+ ++...|.|.+++.+|+|.|+
T Consensus 6 ~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 82 (110)
T 2dm2_A 6 SGAPFFEMKLKHYK-IFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYT 82 (110)
T ss_dssp SCCCCBSSCCCCEE-EETTCCEEEEEEBC--CSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCE
T ss_pred CCCCEEEecCcCeE-EeCCCeEEEEEEEE--ecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEE
Confidence 46788777666554 89999999999998 788899999999999875 556666554 55668999999999999999
Q ss_pred EEEEcCCcceEEEEEEEEeeeee
Q psy2166 571 CRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 571 C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
|.|.|..|.....+.|.|...+.
T Consensus 83 C~a~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 83 IMAANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp EEEECTTCCEEECCCEEEECCSC
T ss_pred EEEEECCCeEEEEEEEEEECCCC
Confidence 99999999999999999987664
No 468
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.45 E-value=4.4e-13 Score=122.02 Aligned_cols=104 Identities=23% Similarity=0.360 Sum_probs=87.0
Q ss_pred cCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEee-CCEEEEEEccCCCCCCE
Q psy2166 489 AAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHD-FGIVILDILYCYEENSG 567 (805)
Q Consensus 489 ~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~~L~i~~v~~~d~G 567 (805)
.+.+..+|.|...+.... +.+|+.++|.|.+. |.|.+.++|+|+|..+..+.++.+... ++...|.|.+++.+|+|
T Consensus 35 ~~~v~~~P~~~~~~~~~~-v~~G~~v~L~C~~~--g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 111 (154)
T 1fhg_A 35 EEKPHVKPYFTKTILDME-VVEGSAARFDCKVE--GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDA 111 (154)
T ss_dssp CCCCCEEEEEEECCCCEE-EETTSCEEEEEEEE--EESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCE
T ss_pred cccCCCCCeEEccCCcEE-EeCCCeEEEEEEEE--EecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCE
Confidence 445567888888777654 89999999999999 678889999999999988888877543 45678999999999999
Q ss_pred EEEEEEEcCCcceEEEEEEEEeeeeeee
Q psy2166 568 VYECRATNKYGSDVTKASLKCVSKTNLI 595 (805)
Q Consensus 568 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 595 (805)
.|+|.|.|..|.....+.|.|...+.+.
T Consensus 112 ~Y~C~a~N~~G~~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 112 KYTCKAVNSLGEATCTAELLVETMGKEG 139 (154)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECC----
T ss_pred EEEEEEEECCCeEEEEEEEEEeCcCcCC
Confidence 9999999999999999999999877643
No 469
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.45 E-value=2.9e-13 Score=113.24 Aligned_cols=94 Identities=23% Similarity=0.392 Sum_probs=78.9
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEcc--CCCceEEEeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLP--HGHRYRTFHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
.+|.|...+.. ..+.+|+.++|.|.+. +.|.+.+.|+|+|..+. ...++.+..++....|.|.+++.+|+|.|+|
T Consensus 4 ~pP~i~~~~~~-~~~~~G~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (100)
T 3irg_A 4 IPPKIEALPSD-ISIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEEECCCCSE-EEEETTSEEEEEEEEE--EESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCeeecCCCc-EEEcCCCcEEEEEEEE--EcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEE
Confidence 45666555444 3489999999999998 66888999999999986 4557777777777889999999999999999
Q ss_pred EEEcCCcceEEEEEEEEee
Q psy2166 572 RATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~ 590 (805)
.|.|..|.....+.|.|..
T Consensus 81 ~a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 81 SLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCcEEEEEEEEEEe
Confidence 9999999999888888753
No 470
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.45 E-value=5.7e-13 Score=113.74 Aligned_cols=93 Identities=16% Similarity=0.119 Sum_probs=74.8
Q ss_pred CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeC-------CEEEEEEccCCCCCC
Q psy2166 494 EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDF-------GIVILDILYCYEENS 566 (805)
Q Consensus 494 ~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~-------~~~~L~i~~v~~~d~ 566 (805)
.||+| .+.. ...+..+.|.|.+. |.|.|.|+|+|||++|..+.+..+.... ....|.|.++...|+
T Consensus 3 ~pP~I--~l~~---~~~~~~~~l~c~v~--G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 75 (126)
T 1he7_A 3 MPASV--QLHT---AVEMHHWCIPFSVD--GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN 75 (126)
T ss_dssp CCCCC--CCCC---CCCCCEEEEEEEEC--CSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGC
T ss_pred CCCEE--EccC---CccCccEEEEEEEe--eeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCC
Confidence 56775 3332 34678999999999 8899999999999999887775443211 235799999999999
Q ss_pred EEEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 567 GVYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 567 G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
|.|+|.|.|..|....++.|.|...|.
T Consensus 76 G~YtC~A~N~~G~~~~t~~l~v~~~P~ 102 (126)
T 1he7_A 76 GNYTLLAANPFGQASASIMAAFMDNPF 102 (126)
T ss_dssp EEEEEEEEETTEEEEEEEEECCCSCTT
T ss_pred EEEEEEEEECCCeEEEEEEEEEEcCCC
Confidence 999999999999999999998876653
No 471
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=1.6e-13 Score=115.29 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=76.1
Q ss_pred CeEEecCCCCceecCCCcEEEEEEEecCCCC-CceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEEE
Q psy2166 66 PVFIVPLKPEFKLGEAQPLHLEAQVEPKNDP-NLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRAW 144 (805)
Q Consensus 66 p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 144 (805)
|.|+. .+.++.+.+|+.++|.|.+. +.| .+.+.|+|||..+..+.++.+..++..++|.|.+++.+|+|.|+|.|
T Consensus 9 ~~~~~-~~~~~~v~~G~~v~l~C~v~--~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a- 84 (104)
T 2eny_A 9 VGITK-RLKTMEVLEGESCSFECVLS--HESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV- 84 (104)
T ss_dssp CCCSB-CCCCEEEESSCCEEEEEECS--SCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE-
T ss_pred CEEEe-cCCCcEEcCCCcEEEEEEEc--CCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE-
Confidence 44544 44478999999999999998 455 34799999999999999999998888889999999999999999998
Q ss_pred eCCeeEEEEEEEEEeccc
Q psy2166 145 NLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 145 n~~g~~~~~~~l~V~~~~ 162 (805)
++....+.|.|..++
T Consensus 85 ---~~~~~~a~L~V~~~p 99 (104)
T 2eny_A 85 ---RGLTSKASLIVRERS 99 (104)
T ss_dssp ---TTEEEEECEEEECCC
T ss_pred ---CCeeEEEEEEEeCCC
Confidence 456678889988755
No 472
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=7.4e-13 Score=111.21 Aligned_cols=91 Identities=13% Similarity=0.199 Sum_probs=76.6
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCC----------ceEEEecCcEEEEEEccccc
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGS----------RFKTTADFGFVTLDLTEVYD 133 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~----------~~~~~~~~~~~~L~I~~~~~ 133 (805)
++|.|+..+. +..|.+|+.++|.|.+. + .+.+.|+|||++|..+. |+.+..++..++|+|.+++.
T Consensus 7 p~~~~~~~l~-d~~v~eG~~a~f~C~vs--~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~ 81 (112)
T 2e6q_A 7 GTARLVAGLE-DVQVYDGEDAVFSLDLS--T--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH 81 (112)
T ss_dssp SCCCEEECCC-CEEEETTCEEEEEEEES--S--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS
T ss_pred CCcEEecCCC-CeEEcCCCcEEEEEEEC--C--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCH
Confidence 4566766665 78999999999999998 3 66899999999999887 99999888899999999999
Q ss_pred CCCeEEEEEEEeCCeeEEEEEEEEEeccc
Q psy2166 134 RDQGIYTCRAWNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 134 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 162 (805)
+|+|.|+|..-+ ...+++.|+|..+|
T Consensus 82 ~D~G~Y~~~~~~---~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 82 QDSGALVGFSCP---GVQDSAALTIQESS 107 (112)
T ss_dssp TTCSEEEEEEET---TEEEEEEEEEECSS
T ss_pred HHCccEEEEEEC---CeeEEEEEEEeCCC
Confidence 999999774433 44578899998765
No 473
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=2.7e-13 Score=113.32 Aligned_cols=95 Identities=23% Similarity=0.319 Sum_probs=78.7
Q ss_pred CCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccC-CCceEEEeeCCEEEEEEccCCCCCCEEEE
Q psy2166 492 VAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPH-GHRYRTFHDFGIVILDILYCYEENSGVYE 570 (805)
Q Consensus 492 ~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 570 (805)
...+|.|...+.... +.+|+.++|.|.+. |.|.+.+.|+|+|..+.. ..++.+..++ .|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~i~~~p~~~~-v~~G~~~~l~C~~~--g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~ 78 (100)
T 2edj_A 5 SSGPPIILQGPANQT-LAVDGTALLKCKAT--GDPLPVISWLKEGFTFPGRDPRATIQEQG---TLQIKNLRISDTGTYT 78 (100)
T ss_dssp CCSSCEEEECCCCEE-EESSSEEEECCEEE--CSSCCEEEEEESSSEESSSCSSCEECTTC---CEEEESCCTTTCCEEE
T ss_pred CCCCCEEEeCcCCEE-EcCCCcEEEEEEEE--EcCCCEEEEEECCEECCCCCCCEEEcCCC---EEEEccCCcccCEEEE
Confidence 356788887766654 89999999999999 788899999999998873 4455443333 4999999999999999
Q ss_pred EEEEcCCcceEEEEEEEEeeee
Q psy2166 571 CRATNKYGSDVTKASLKCVSKT 592 (805)
Q Consensus 571 C~a~n~~g~~~~~~~l~V~~~~ 592 (805)
|.|.|..|.....+.|.|..++
T Consensus 79 C~a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 79 CVATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp EEEECSSCCCBCCEEEEEESCC
T ss_pred EEEEcCCCCEEEEEEEEEecCC
Confidence 9999999999999999987653
No 474
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.44 E-value=3.1e-13 Score=119.30 Aligned_cols=85 Identities=22% Similarity=0.307 Sum_probs=74.3
Q ss_pred CCcccccCCCeEEEEEEEeeCCCCCcEEEEEECC----------------------------EEc-cCCCceEEEeeCCE
Q psy2166 503 SDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNG----------------------------KKL-PHGHRYRTFHDFGI 553 (805)
Q Consensus 503 ~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g----------------------------~~l-~~~~~~~~~~~~~~ 553 (805)
+....+.+|++++|.|.+. |.|.|.|+|+|+| ..+ ....++.+...+..
T Consensus 25 p~~~~v~~G~~v~L~C~~~--G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~ 102 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDR 102 (139)
T ss_dssp CCEEEESSSSCCCCEEECC--SBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTE
T ss_pred CCCEEEeCCCeEEEEEEEE--EcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCE
Confidence 4455699999999999999 7899999999999 555 35567777777778
Q ss_pred EEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 554 VILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 554 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 103 s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 103 SIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 899999999999999999999999999999988875
No 475
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=2.7e-13 Score=115.86 Aligned_cols=95 Identities=14% Similarity=0.105 Sum_probs=75.0
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecC-CCCCceEEEEECCEe-cC--CCCceEEEec--C----cEEEEEEcccccC
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPK-NDPNLKIEWIFNGKP-LE--LGSRFKTTAD--F----GFVTLDLTEVYDR 134 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~-~~p~~~v~W~k~g~~-i~--~~~~~~~~~~--~----~~~~L~I~~~~~~ 134 (805)
.|.|+..+. ++.|.+|+.++|.|.+.+. +.|.|.|+|||++.. +. .+.++.+... . ..++|+|.+++.+
T Consensus 7 ~~~F~~~P~-~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 7 GILFIEKPQ-GGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp SCSCCSCCC-CCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred ccEEEEcCC-CeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcc
Confidence 366766664 7899999999999999843 348999999997521 11 2456665422 1 2578999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEec
Q psy2166 135 DQGIYTCRAWNLAGETFTSTTIYCST 160 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~~~~~~~l~V~~ 160 (805)
|+|.|+|.|.|..|..+..+.|+|..
T Consensus 86 DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 86 FAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999987
No 476
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=9e-13 Score=112.98 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=76.6
Q ss_pred CCCeeeecCCc---ccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEE
Q psy2166 690 RPPQFTSEFQH---LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYT 766 (805)
Q Consensus 690 ~~P~~~~~~~~---~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 766 (805)
.||.+...+.+ . .+.+|+.+.|.|.+ +.|.+.+.|+|+|+.+..+.++.+..++....|.|.++..+|+|.|+
T Consensus 9 ~pp~~~~~p~~~~~~-~~~~G~~v~L~C~~---~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 84 (113)
T 2cpc_A 9 DVSSWIVYPSGKVYV-AAVRLERVVLTCEL---CRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYL 84 (113)
T ss_dssp SCSCSEEESCSCEEE-EEETTCCEEEEEEE---SCTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEE
T ss_pred cCCcEEEccCCceeE-EEEcCCeEEEEEEe---cCCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEE
Confidence 45655555554 4 78899999999998 46889999999999999989998887777789999999999999999
Q ss_pred EEEEcCCccEEEEEEEEEEEeC
Q psy2166 767 CRATNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 767 C~a~N~~G~~~~~~~l~V~~~~ 788 (805)
|.|.| .+.++.|.|...|
T Consensus 85 C~a~n----~~~~~~l~V~~~p 102 (113)
T 2cpc_A 85 CEIDD----ESASFTVTVTEPP 102 (113)
T ss_dssp EESSS----CEEEEEEEEECCC
T ss_pred EEEec----CcEEEEEEEecCC
Confidence 99999 5677888886533
No 477
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.42 E-value=2.1e-12 Score=110.65 Aligned_cols=99 Identities=24% Similarity=0.290 Sum_probs=83.4
Q ss_pred cccCCCC-CCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCC
Q psy2166 487 AQAAPVA-EAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEEN 565 (805)
Q Consensus 487 ~~~~~~~-~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d 565 (805)
...+.+. .||.|...+.+.. +.+|++++|.|.+. +. |.++|+|+|..+..+.++.+..++....|.|.+++.+|
T Consensus 10 ~~~l~V~~~pp~~~~~~~~~~-v~~G~~v~l~C~~~--~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
T 2edh_A 10 SAMLTVRALPIKFTEGLRNEE-ATEGATAVLRCELS--KM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAED 84 (113)
T ss_dssp CCCCCCCCSCCCEEECCCCCE-ECTTSCEEEEEEES--SC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTT
T ss_pred EEEEEEEcCCCcccccCCceE-EeCCCeEEEEEEEC--CC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhh
Confidence 3344455 4568877766654 99999999999997 54 57999999999998889999888888899999999999
Q ss_pred CEEEEEEEEcCCcceEEEEEEEEeeeeee
Q psy2166 566 SGVYECRATNKYGSDVTKASLKCVSKTNL 594 (805)
Q Consensus 566 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 594 (805)
+|.|+|.| |.....+.|.|...|..
T Consensus 85 ~G~Y~C~a----~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 85 AGEYLCMC----GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp CEEEEEEE----TTEEEEEEEEECCCCCS
T ss_pred CEEEEEEe----CCCCEEEEEEEeCCCCC
Confidence 99999999 88888999999887754
No 478
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.42 E-value=7.6e-13 Score=110.90 Aligned_cols=95 Identities=21% Similarity=0.242 Sum_probs=74.6
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE--EeeC---CEEEEEEccCCCCCCE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT--FHDF---GIVILDILYCYEENSG 567 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~--~~~~---~~~~L~i~~v~~~d~G 567 (805)
..||++.. +.. ...|..+.|.|.+. |.|.|.++|+|||+.|..+.+... ...+ ....|.|.++..+|+|
T Consensus 2 ~~pP~i~~-~~~---~~~~~~~~~~c~v~--G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 75 (103)
T 1wwb_X 2 HFAPTITF-LES---PTSDHHWCIPFTVK--GNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNG 75 (103)
T ss_dssp CCCCCCCC-CCC---CCCCCEEEEEEEEE--CSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred CCCCEEEe-ccC---ceECcEEEEEEEEE--EeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCE
Confidence 45666532 111 34688999999999 889999999999999987765422 2111 1345999999999999
Q ss_pred EEEEEEEcCCcceEEEEEEEEeeeee
Q psy2166 568 VYECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 568 ~Y~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.|+|.|.|..|....++.|.|...|.
T Consensus 76 ~Y~C~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 76 DYTLIAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp EEEEEEECSSCEEEEEEEECCSCCCC
T ss_pred EEEEEEEeCCCcEeEEEEEEECCCCC
Confidence 99999999999999999999887654
No 479
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=7.4e-13 Score=111.23 Aligned_cols=91 Identities=14% Similarity=0.218 Sum_probs=75.4
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCC--ceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGS--RFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~--~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
+|..+...+.++.+.+|+.++|.|.+. + |.+.|.|+|||..+..+. +|.+..++...+|.|.+++.+|+|.|+|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~--~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 82 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVS--E-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVM 82 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECS--S-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEE
T ss_pred CCceeeccCCCEEEECCCCEEEEEEec--C-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEE
Confidence 454333444478999999999999997 4 668999999999998887 78998888888999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccc
Q psy2166 143 AWNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~ 162 (805)
|.| ....+.|.|..++
T Consensus 83 a~n----~~~~~~l~V~~~p 98 (103)
T 1x44_A 83 TTG----GQSSAKLSVDLKS 98 (103)
T ss_dssp ETT----EEEEEEEEEECCC
T ss_pred ECC----CcEEEEEEEeCCC
Confidence 976 4667778887654
No 480
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=3.1e-13 Score=112.69 Aligned_cols=94 Identities=23% Similarity=0.402 Sum_probs=78.0
Q ss_pred CCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEE
Q psy2166 490 APVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVY 569 (805)
Q Consensus 490 ~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 569 (805)
..+..+|.|...+.... +.+|++++|.|.+. |.|.|.+.|+|+|..+...... ...+...|.|.++..+|+|.|
T Consensus 6 ~~~~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y 79 (99)
T 2yr3_A 6 SGMEVAPSFSSVLKDCA-VIEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTY 79 (99)
T ss_dssp SCCCEEEEEEECCCCEE-ECTTCCEEEECEEE--EESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCE
T ss_pred CCcccCCceeecCCCCE-EeCCCeEEEEEEEe--eeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEE
Confidence 34567888888776654 89999999999998 6688899999999988765432 234556799999999999999
Q ss_pred EEEEEcCCcceEEEEEEEEe
Q psy2166 570 ECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 570 ~C~a~n~~g~~~~~~~l~V~ 589 (805)
+|.|.|..|.....+.|.|.
T Consensus 80 ~C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 80 TCLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp EEEEECSSCEEEEECCEEEC
T ss_pred EEEEEECCCeEEEEEEEEEC
Confidence 99999999999888888773
No 481
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.41 E-value=9.5e-13 Score=112.66 Aligned_cols=94 Identities=17% Similarity=0.292 Sum_probs=75.0
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEE-E--ee-----CcEEEEEEcCCCCCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT-V--HA-----FGMVVLEILGTKIED 761 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~-~--~~-----~~~~~L~i~~v~~~d 761 (805)
.+|.|...+.+. .+.+|+.++|.|.+.+.+.|.+.+.|+|+|..+........ . .. .....|.|.+++.+|
T Consensus 9 ~~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 9 PXPQITVQPETQ-SAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CSCEEEECCCCE-EECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCeEEeCCCCc-EEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 689999999988 99999999999999843445689999999998876432111 0 00 013589999999999
Q ss_pred CEEEEEEEEcCCcc-EEEEEEEEE
Q psy2166 762 TGVYTCRATNKWGQ-AEISVNLEC 784 (805)
Q Consensus 762 ~G~Y~C~a~N~~G~-~~~~~~l~V 784 (805)
+|.|+|.|.|..|. .+..+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 99999999999998 557888877
No 482
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.41 E-value=2e-13 Score=116.11 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=71.1
Q ss_pred CCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEE
Q psy2166 490 APVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVY 569 (805)
Q Consensus 490 ~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 569 (805)
+.+..+|.|...+.... +.+|+.++|.|.+. |.|.+.+.|+|+|..+....++.....+. .|.|.+++.+|+|.|
T Consensus 5 v~~~~~P~~~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y 79 (108)
T 3kvq_A 5 VLERVAPTITGNLENQT-TSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLY 79 (108)
T ss_dssp ------CCCBSCCCCEE-EETTCCEEEECBCC------CCEEEEESSSBCCCBTTEEEETTTT--EEEECSCCGGGCEEE
T ss_pred ECccCCCceecCCCCeE-EeCCCeEEEEEECc--CcCCCeEEEEECCeEcccCCCeEEeCCCc--EEEEeecCcccCEEE
Confidence 34467888887766654 89999999999998 77888999999999998776666544433 599999999999999
Q ss_pred EEEEEcCCcceEEEEEEEEeeeee
Q psy2166 570 ECRATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 570 ~C~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
+|.|.|..|.....+.|.|..++.
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 80 TCQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EEEEC----CEEEEEEEEEEC---
T ss_pred EEEEEeCCCceEEEEEEEEeCCCc
Confidence 999999999999999999987664
No 483
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.41 E-value=8.1e-13 Score=112.25 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=75.6
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCE-Ec-------cCCCCeEEEee-CcEEEEEEcCCCCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGK-PI-------EASHRIRTVHA-FGMVVLEILGTKIE 760 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~-~l-------~~~~~~~~~~~-~~~~~L~i~~v~~~ 760 (805)
.+|.|...+.+. .+.+|++++|.|.+. +.|.+.+.|+|++. .+ ....++.+... .+...|.|.+++.+
T Consensus 5 ~~p~~~~~~~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 81 (108)
T 3m45_A 5 GSQGQFPLTQNV-TVVEGGTAILTCRVD--QNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLS 81 (108)
T ss_dssp ---CCCEECCCE-EEETTSCEEEEEEES--SCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGG
T ss_pred cCCCccccCCee-EEEeCCcEEEEeEEc--CCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChh
Confidence 467778888888 999999999999998 88999999999774 22 22346665332 34678999999999
Q ss_pred CCEEEEEEEEcCCccEEEEEEEEEEEe
Q psy2166 761 DTGVYTCRATNKWGQAEISVNLECVVW 787 (805)
Q Consensus 761 d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 787 (805)
|+|.|+|.|.| .|..+..+.|.|.+.
T Consensus 82 D~G~Y~C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 82 DEGQYTCSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp GCEEEEEEECS-SSCEEEEEEEEEECC
T ss_pred HCeEEEEEEEc-CCCcEEEEEEEEEcC
Confidence 99999999999 899999999999753
No 484
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=4.3e-13 Score=115.28 Aligned_cols=97 Identities=16% Similarity=0.271 Sum_probs=79.2
Q ss_pred CCcCCC-eEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEE-ecCcEEEEEEcccccCCCeE
Q psy2166 61 ETFAKP-VFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTT-ADFGFVTLDLTEVYDRDQGI 138 (805)
Q Consensus 61 ~~~~~p-~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~-~~~~~~~L~I~~~~~~D~G~ 138 (805)
.+..+| .|...+ .++.+.+|+.++|.|.+. +.|.+.|.|+|||..+..+.++.+. .+++.++|.|.+++.+|+|.
T Consensus 8 ~V~~~p~~~~~~~-~~~~v~~G~~v~l~C~~~--g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 84 (115)
T 2cr6_A 8 LVQGRRVHIIEDL-EDVDVQEGSSATFRCRIS--PANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGT 84 (115)
T ss_dssp CCCSSCCEEEECC-CEEEEETTSCEECCCEEE--STTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEE
T ss_pred EEcCCCCeEeccC-ccEEEeCCCcEEEEEEEc--CCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEE
Confidence 334444 454444 578999999999999999 6888899999999999988888776 34666789999999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEeccccc
Q psy2166 139 YTCRAWNLAGETFTSTTIYCSTKESL 164 (805)
Q Consensus 139 Y~C~a~n~~g~~~~~~~l~V~~~~~~ 164 (805)
|+|.+ |.....+.|.|..++.+
T Consensus 85 Y~C~~----g~~~~~~~L~V~~~p~~ 106 (115)
T 2cr6_A 85 IYFEA----GDQRASAALRVTEKPSV 106 (115)
T ss_dssp EEEEE----TTEECCEEEEEECCSSC
T ss_pred EEEEE----CCeeEEEEEEEECCCce
Confidence 99995 67777889999877654
No 485
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.40 E-value=1.1e-12 Score=108.25 Aligned_cols=87 Identities=18% Similarity=0.307 Sum_probs=73.1
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTCRA 143 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 143 (805)
.+|.|... +..+.+.+|+.++|.|.+. +.| +.|.|+|||..+..+.++.+.. + +|.|.+++.+|+|.|+|.|
T Consensus 8 ~pp~~~~~-~~~~~v~~G~~v~l~C~~~--g~p-p~i~W~k~g~~~~~~~~~~~~~--~--~L~i~~~~~~D~G~Y~C~a 79 (95)
T 2ckn_A 8 QPWGVPVE-VESLLVHPGDLLQLRCRLR--DDV-QSINWLRDGVQLVESNRTRITG--E--EVEVRDSIPADSGLYACVT 79 (95)
T ss_dssp CSCCBTTB-BCCEEECTTSCEEEECCEE--SSC-CEEEEEBTTBCCCCCSSEEECS--S--EEEESSCCGGGSEEEEEEE
T ss_pred CCCEEEcC-cceEEEcCCCeEEEEEECC--CCC-CceEEEECCEecCCCCCEEEeC--C--EEEECCCChHHCEEEEEEe
Confidence 34555444 4478999999999999998 566 7999999999998888877652 2 8999999999999999999
Q ss_pred EeCCeeEEEEEEEEE
Q psy2166 144 WNLAGETFTSTTIYC 158 (805)
Q Consensus 144 ~n~~g~~~~~~~l~V 158 (805)
.|..|.......|.|
T Consensus 80 ~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 80 SSPSGSDTTYFSVNV 94 (95)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEE
Confidence 999999888887776
No 486
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.40 E-value=3.5e-12 Score=124.63 Aligned_cols=175 Identities=17% Similarity=0.255 Sum_probs=110.1
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--E---Ec--------------cCCCceEEEEeC--cEEEEEEcccCcCCc
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--K---PI--------------FHKNRVKMVSDF--GFVVMDIAYVQSHDS 374 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~---~l--------------~~~~~~~~~~~~--~~~~l~i~~v~~~d~ 374 (805)
+.+|+.++|.|.+.+...+...+.|+|.. . .+ ....|+.+..+. ....|+|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (226)
T 3mlr_H 12 KQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASDT 91 (226)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGGC
T ss_pred EecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCcccC
Confidence 78999999999997322345689999832 1 11 012466665543 567899999999999
Q ss_pred eEEEEEEEeCce-------eeE--EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeecc
Q psy2166 375 GEYVCRAWNKYG-------EDF--TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISD 445 (805)
Q Consensus 375 G~Y~C~a~n~~g-------~~~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (805)
|.|.|.+.+..+ ... ....|.|..
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~----------------------------------------------- 124 (226)
T 3mlr_H 92 GKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSS----------------------------------------------- 124 (226)
T ss_dssp EEEEEEEEEEEESSSEEEEEEEECCCEEEEECC-----------------------------------------------
T ss_pred EEEEEeEccCCCcccccchhhhhCCccEEeecc-----------------------------------------------
Confidence 999999976431 000 112344321
Q ss_pred eeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCC
Q psy2166 446 VTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTD 525 (805)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~ 525 (805)
....+|.+....+... +.+|+.++|.|.+.+..+
T Consensus 125 ---------------------------------------------~~~~~P~i~~~~~~~~-~~~g~~~~l~C~~~~~~p 158 (226)
T 3mlr_H 125 ---------------------------------------------GTTKGPSVFPLAPSSK-STSGGTAALGCLVKDYFP 158 (226)
T ss_dssp ---------------------------------------------CCCBCCEEEEEEEEEC-STTSSEEEEEEEEEEEBS
T ss_pred ---------------------------------------------CCCCCCcEEEecCccc-ccCCCCEEEEEEEEEEEC
Confidence 1134566654333322 568999999999997433
Q ss_pred CCcEEEEEECCEEccCCCce--EEEeeCC----EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEE
Q psy2166 526 PDLVVEWFYNGKKLPHGHRY--RTFHDFG----IVILDILYCYEENSGVYECRATNKYGSDVTKASL 586 (805)
Q Consensus 526 p~~~v~W~~~g~~l~~~~~~--~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 586 (805)
+.+.++| ++..+..+... .....++ .+.|.|.....+| |.|+|.|.|..+.......|
T Consensus 159 ~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 159 EPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 222 (226)
T ss_dssp SCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEEC
T ss_pred CCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeEEEc
Confidence 3679999 55433211000 0111111 2368999988889 99999999988776544443
No 487
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=1e-12 Score=110.14 Aligned_cols=92 Identities=18% Similarity=0.421 Sum_probs=77.9
Q ss_pred CCcCCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCC-CceEEEecCcEEEEEEcccccCCCeEE
Q psy2166 61 ETFAKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELG-SRFKTTADFGFVTLDLTEVYDRDQGIY 139 (805)
Q Consensus 61 ~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~-~~~~~~~~~~~~~L~I~~~~~~D~G~Y 139 (805)
....+|.|+..++..+.+.+|+.++|.|.+. .|.+.|.|+|||..+..+ .++.+..++..++|.|.+++.+|+|.|
T Consensus 11 ~~~~~p~f~~~~~~~~~v~~G~~v~L~C~~~---~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 87 (104)
T 1pd6_A 11 DEKKSTAFQKKLEPAYQVSKGHKIRLTVELA---DHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAY 87 (104)
T ss_dssp CCSTTSSCSEECCSEEEEETTSCEEEEEECS---SSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEE
T ss_pred CccCCCEEEEcCCCcEEEecCCCEEEEEEEc---CCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEE
Confidence 3456788888887668999999999999984 777889999999999887 789988888888999999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEe
Q psy2166 140 TCRAWNLAGETFTSTTIYCS 159 (805)
Q Consensus 140 ~C~a~n~~g~~~~~~~l~V~ 159 (805)
+|.| +.....+.|.|.
T Consensus 88 ~C~a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 88 QCVV----GGEKCSTELFVK 103 (104)
T ss_dssp EEEE----TTEEECCEEEEE
T ss_pred EEEE----CCCcEEEEEEEe
Confidence 9999 445556666664
No 488
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.40 E-value=2.1e-12 Score=129.13 Aligned_cols=179 Identities=13% Similarity=0.179 Sum_probs=109.3
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEECC--E---Ec-------------cCCCceEEEEe--CcEEEEEEcccCcCCce
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHNG--K---PI-------------FHKNRVKMVSD--FGFVVMDIAYVQSHDSG 375 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~g--~---~l-------------~~~~~~~~~~~--~~~~~l~i~~v~~~d~G 375 (805)
+.+|+.++|.|.+.+.......+.|+|.. . .+ ....++.+..+ .....|+|.+++.+|+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG 91 (263)
T 3iu4_H 12 VAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTA 91 (263)
T ss_dssp ECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred EcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHHCE
Confidence 88999999999997322235689999732 1 11 01246666544 35678999999999999
Q ss_pred EEEEEEEeCce-----ee-E--EEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeeeccee
Q psy2166 376 EYVCRAWNKYG-----ED-F--TRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQISDVT 447 (805)
Q Consensus 376 ~Y~C~a~n~~g-----~~-~--~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (805)
.|.|.+.+..+ .. . ....|.|..
T Consensus 92 ~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~------------------------------------------------- 122 (263)
T 3iu4_H 92 MYYCARSGVREGRAQAWFAYWGQGTLVTVSA------------------------------------------------- 122 (263)
T ss_dssp EEEEEEEECC---CEEEEEEECCCEEEEECS-------------------------------------------------
T ss_pred EEEEEEEeCCCCccccccceeCCceEEEEec-------------------------------------------------
Confidence 99999987631 11 1 123444421
Q ss_pred eecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeCCCCC
Q psy2166 448 QLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPD 527 (805)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~ 527 (805)
....+|.+....+... +.+|+.++|.|.+.++.++.
T Consensus 123 -------------------------------------------~~~~~P~v~~~~~~~~-~~~g~~~~L~C~~~~~~P~~ 158 (263)
T 3iu4_H 123 -------------------------------------------ASTKGPSVFPLAPSSK-GSTSGTAALGCLVKDYFPEP 158 (263)
T ss_dssp -------------------------------------------SCCBCCEEEEECCCCC-C----EEEEEEEEEEEBSSC
T ss_pred -------------------------------------------ccCCCCEEEEccCccc-cccCCcEEEEEEEEeEeCCc
Confidence 1134566654333333 56899999999999743335
Q ss_pred cEEEEEECCEEccCCC---ceEEEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEee
Q psy2166 528 LVVEWFYNGKKLPHGH---RYRTFHDFG---IVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 590 (805)
Q Consensus 528 ~~v~W~~~g~~l~~~~---~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 590 (805)
+.++| ++..+..+. ......++. .+.|.|.....+| |.|+|.|.|..+.......|.+..
T Consensus 159 ~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~~~ 224 (263)
T 3iu4_H 159 VTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPAQ 224 (263)
T ss_dssp CEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECCCC-
T ss_pred eEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEcCCC
Confidence 89999 554442210 011111111 2368898877778 999999999988766665555433
No 489
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.6e-13 Score=112.37 Aligned_cols=87 Identities=16% Similarity=0.234 Sum_probs=74.5
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEE
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 769 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 769 (805)
.+|.|...+.+. .+.+|+.++|.|.+. |.|.+.|.|+|+|..+..... ..|.|.++..+|+|.|+|.|
T Consensus 9 ~~~~i~~~p~~~-~v~~G~~v~l~C~~~--g~p~~~v~W~k~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a 76 (96)
T 2ens_A 9 EEVQLVVEPEGG-AVAPGGTVTLTCEVP--AQPSPQIHWMKDGVPLPLPPS---------PVLILPEIGPQDQGTYSCVA 76 (96)
T ss_dssp CSCCCEEESTTS-EECTTCEEEEECCCS--SCSSCCCCCEESSSBCSSCCC---------SEEEEESCCTTTCEEEECEE
T ss_pred CCCEEEECCCCC-EEcCCCeEEEEEEEc--cCCCCEEEEEECCEECcCCCC---------CEEEECCCCcccCEEEEEEE
Confidence 578888888888 899999999999998 999999999999998875432 26999999999999999999
Q ss_pred EcCCccEEEEEEEEEEEeC
Q psy2166 770 TNKWGQAEISVNLECVVWS 788 (805)
Q Consensus 770 ~N~~G~~~~~~~l~V~~~~ 788 (805)
.|..|....+..+.|.+..
T Consensus 77 ~n~~~~~~~s~~~~v~V~~ 95 (96)
T 2ens_A 77 THSSHGPQESRAVSISIIE 95 (96)
T ss_dssp CCSSCCCEECCCEEEEECC
T ss_pred EeCCCCcEEEEEEEEEEeC
Confidence 9988877677667666543
No 490
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.39 E-value=2.9e-13 Score=116.92 Aligned_cols=93 Identities=28% Similarity=0.407 Sum_probs=72.4
Q ss_pred CCCeeeecCCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCC-----CeEEEeeCcEEEEEEc--CCCCCCC
Q psy2166 690 RPPQFTSEFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH-----RIRTVHAFGMVVLEIL--GTKIEDT 762 (805)
Q Consensus 690 ~~P~~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~-----~~~~~~~~~~~~L~i~--~v~~~d~ 762 (805)
.||.|...+.+. .+.+|+.+.|.|.+. |.|.|.|+|+|+|..+.... +.....++....|.|. ++..+|+
T Consensus 8 ~pP~i~~~p~~~-~v~~G~~v~L~C~~~--g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~ 84 (117)
T 2v9t_A 8 FPPRIVEHPSDL-IVSKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (117)
T ss_dssp EEEEEEECCCCE-EECTTCCEEECCEEE--EESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSC
T ss_pred CCCeeEcCCCCE-EEcCCCcEEEEEECC--ccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcC
Confidence 688999988888 999999999999998 99999999999999887653 2222333433333333 6789999
Q ss_pred EEEEEEEEcCCccEEE-EEEEEEE
Q psy2166 763 GVYTCRATNKWGQAEI-SVNLECV 785 (805)
Q Consensus 763 G~Y~C~a~N~~G~~~~-~~~l~V~ 785 (805)
|.|+|.|.|.+|.... .++|.|.
T Consensus 85 G~Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 85 GVYVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEEeCccceEeeeEEEEhh
Confidence 9999999999997654 4556654
No 491
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=7.3e-13 Score=111.33 Aligned_cols=93 Identities=18% Similarity=0.347 Sum_probs=80.4
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEEEeeCCEEEEEEccCCCCCCEEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 572 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 572 (805)
..||.|...+.+.. +.+|++++|.|.+. + |.+.+.|+|+|+.+..+.++.+..++....|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~~-v~~G~~v~l~C~~~--~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2edf_A 6 SGPAAIIKPLEDQW-VAPGEDVELRCELS--R-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCE 81 (103)
T ss_dssp CCCCCEEECCCCEE-ECTTSCEEECCEES--S-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEE
T ss_pred CCCcEEEecCCccE-EcCCCCEEEEEEEe--C-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEE
Confidence 46677777766654 99999999999998 5 67789999999999888899888888888999999999999999999
Q ss_pred EEcCCcceEEEEEEEEeeeee
Q psy2166 573 ATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 573 a~n~~g~~~~~~~l~V~~~~~ 593 (805)
|.| ....+.|.|..++.
T Consensus 82 a~n----~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 82 VEA----SKSTASLHVEEKAS 98 (103)
T ss_dssp CSS----CEEEEEEEECCCSS
T ss_pred Ecc----CCcEEEEEEeCCCC
Confidence 998 46778888887665
No 492
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=2.4e-13 Score=116.01 Aligned_cols=98 Identities=22% Similarity=0.414 Sum_probs=83.1
Q ss_pred CCCCceEecCCCcccccCCCeEEEEEEEeeCCCCCcEEEEEECCEEccCCCceEE-EeeCCEEEEEEccCCCCCCEEEEE
Q psy2166 493 AEAPKFITQISDVTQLKEGQSAHFEARLTPVTDPDLVVEWFYNGKKLPHGHRYRT-FHDFGIVILDILYCYEENSGVYEC 571 (805)
Q Consensus 493 ~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~g~p~~~v~W~~~g~~l~~~~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C 571 (805)
..+|.|...+.... +.+|+.++|.|.+. +.|.+.+.|+|+|..+....+... ...++...|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~~~~~~-v~~G~~v~l~C~~~--g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm3_A 7 GFRPHFLQAPGDLT-VQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTC 83 (110)
T ss_dssp CCCCEEEECCCEEE-EESSSCBCCEEEEE--CSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCE
T ss_pred CCCCcEEeCCCcEE-EeCCCEEEEEEEEE--EcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEE
Confidence 46888888766654 89999999999999 788899999999999876655544 334456789999999999999999
Q ss_pred EEEcCCcceEEEEEEEEeeeee
Q psy2166 572 RATNKYGSDVTKASLKCVSKTN 593 (805)
Q Consensus 572 ~a~n~~g~~~~~~~l~V~~~~~ 593 (805)
.|.|..|.....+.|.|..++.
T Consensus 84 ~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 84 IATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp EEECSSCEEEECCEEEEECCCC
T ss_pred EEECCCCEEEEEEEEEEeCCCC
Confidence 9999999999999999988765
No 493
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=4.6e-13 Score=112.04 Aligned_cols=90 Identities=17% Similarity=0.291 Sum_probs=74.6
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCC----ceEEEecCcEEEEEEcccccCCCeEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGS----RFKTTADFGFVTLDLTEVYDRDQGIY 139 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~----~~~~~~~~~~~~L~I~~~~~~D~G~Y 139 (805)
.+|.|...+. ++.+.+|+.++|.|.+. +.| +.|.|+|||..+..+. +|.+..++...+|.|.+++.+|+|.|
T Consensus 7 ~p~~~~~~~~-~~~v~~G~~v~l~C~~~--~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y 82 (101)
T 2edk_A 7 GPVLIVTPLE-DQQVFVGDRVEMAVEVS--EEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRY 82 (101)
T ss_dssp CCCCEEECCC-CEEEESSCCCBCCEEES--CSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBE
T ss_pred CCCEEEecCC-ceEEcCCCCEEEEEEEe--CCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEE
Confidence 4566665554 68999999999999998 566 8999999999998776 77888888888999999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEecc
Q psy2166 140 TCRAWNLAGETFTSTTIYCSTK 161 (805)
Q Consensus 140 ~C~a~n~~g~~~~~~~l~V~~~ 161 (805)
+|.|.| ....+.|.|..+
T Consensus 83 ~C~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 83 QVITNG----GQCEAELIVEEK 100 (101)
T ss_dssp EEECSS----CEECCBEEEECC
T ss_pred EEEEcC----CcEEEEEEEeCC
Confidence 999976 345566777643
No 494
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.38 E-value=3.9e-12 Score=127.06 Aligned_cols=178 Identities=13% Similarity=0.176 Sum_probs=111.7
Q ss_pred ccCCCeEEEEEEEeecCCCCcEEEEEEC--CE---Ec--------------cCCCceEEEEe--CcEEEEEEcccCcCCc
Q psy2166 316 LKDGDSAHFECTLTPVNDPELKVEWFHN--GK---PI--------------FHKNRVKMVSD--FGFVVMDIAYVQSHDS 374 (805)
Q Consensus 316 ~~~g~~~~l~C~~~~~~~p~~~v~W~~~--g~---~l--------------~~~~~~~~~~~--~~~~~l~i~~v~~~d~ 374 (805)
+.+|++++|.|.+.+.......+.|+|. +. .+ ....|+.+..+ .+...|+|.+++.+|+
T Consensus 35 v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 114 (256)
T 3sob_H 35 VQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAEDT 114 (256)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCcccC
Confidence 7899999999999732223568999973 11 11 01246666554 3567899999999999
Q ss_pred eEEEEEEEeCce---------e--eEEEEEEEEEecccccccCCChhHHHHHHHhhhccCCCCccccCcccCCCceeeee
Q psy2166 375 GEYVCRAWNKYG---------E--DFTRATIKCFGKGGVYLDSLQPESLARIRELENAQGQQPVAQAAPVAEAPKFITQI 443 (805)
Q Consensus 375 G~Y~C~a~n~~g---------~--~~~~~~l~V~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (805)
|.|.|.+.+..+ . ......|.|..
T Consensus 115 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~--------------------------------------------- 149 (256)
T 3sob_H 115 AVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSS--------------------------------------------- 149 (256)
T ss_dssp EEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECS---------------------------------------------
T ss_pred EEEEEEEecCCCccccccccceeEECCCEEEEEec---------------------------------------------
Confidence 999999986431 1 11223444421
Q ss_pred cceeeecCCceEEEEEEEeccCCCCceEEEeecccCCCCCCcccccCCCCCCCceEecCCCcccccCCCeEEEEEEEeeC
Q psy2166 444 SDVTQLKEGQSAHFEARLTPVTDPDLVCELFSNFFPSQGQQPVAQAAPVAEAPKFITQISDVTQLKEGQSAHFEARLTPV 523 (805)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~L~C~v~~~ 523 (805)
....+|.+....+... +.+|+.++|.|.+.+.
T Consensus 150 -----------------------------------------------~~~~~P~i~~~~~~~~-~~~g~~v~L~C~~~~~ 181 (256)
T 3sob_H 150 -----------------------------------------------ASTKGPSVFPLAPSSK-STSGGTAALGCLVKDY 181 (256)
T ss_dssp -----------------------------------------------SCCBCCEEEEECCC------TTEEEEEEEEEEE
T ss_pred -----------------------------------------------CCCCCCEEEEECCCcc-cccCCcEEEEEEEEEE
Confidence 1134566654333332 6789999999999964
Q ss_pred CCCCcEEEEEECCEEccCCCc---eEEEeeCC---EEEEEEccCCCCCCEEEEEEEEcCCcceEEEEEEEEe
Q psy2166 524 TDPDLVVEWFYNGKKLPHGHR---YRTFHDFG---IVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 589 (805)
Q Consensus 524 g~p~~~v~W~~~g~~l~~~~~---~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 589 (805)
.++.+.++| +|..+..+.. .....++. .+.|.|.....+| |.|+|.|.|..+.......|.+.
T Consensus 182 ~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 182 FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred ECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 333678999 6655432110 01111111 2468999988899 99999999998877766666543
No 495
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.2e-12 Score=111.43 Aligned_cols=93 Identities=23% Similarity=0.206 Sum_probs=78.4
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCCceEEEEECCEecCC-CCceEEEecCcEEEEEEcccccCCCeEEEEE
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLEL-GSRFKTTADFGFVTLDLTEVYDRDQGIYTCR 142 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 142 (805)
.+|.|...+ ..+.+.+|+.++|.|.+. |.|.+.|.|+|||..+.. ..++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 7 ~pP~i~~~p-~~~~v~~G~~v~l~C~~~--g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 7 GPPVIRQGP-VNQTVAVDGTFVLSCVAT--GSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCI 80 (118)
T ss_dssp CSCCCSBCC-CCEEEETTCEEEEECBCC--CSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEE
T ss_pred CCCEEEcCC-CCEEEcCCCeEEEEEEEE--ecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEE
Confidence 456665544 468899999999999998 788899999999998864 5577766655 799999999999999999
Q ss_pred EEeCCeeEEEEEEEEEeccc
Q psy2166 143 AWNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 143 a~n~~g~~~~~~~l~V~~~~ 162 (805)
|.|..|.....+.|.|..++
T Consensus 81 a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 81 ASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp EECSSCEEEEECCEEEECCS
T ss_pred EEcCCCcEEEEEEEEEEeCC
Confidence 99999998888888887653
No 496
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=110.19 Aligned_cols=92 Identities=16% Similarity=0.230 Sum_probs=76.3
Q ss_pred CCCeEEecCCCC--ceecCCCcEEEEEEEecCCCCCceEEEEECCEecCCCCceEEEecCcEEEEEEcccccCCCeEEEE
Q psy2166 64 AKPVFIVPLKPE--FKLGEAQPLHLEAQVEPKNDPNLKIEWIFNGKPLELGSRFKTTADFGFVTLDLTEVYDRDQGIYTC 141 (805)
Q Consensus 64 ~~p~~~~~~~~~--~~v~~G~~v~L~C~~~~~~~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 141 (805)
.+|.++..+... +.+.+|+.++|.|.+. +.|.+ |.|+|||..+..+.++.+..++....|.|.+++.+|+|.|+|
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~--~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 82 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELS--RVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFEC 82 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECS--STTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEec--CCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEE
Confidence 356666555533 6889999999999998 57777 999999999998889999888888899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEeccc
Q psy2166 142 RAWNLAGETFTSTTIYCSTKE 162 (805)
Q Consensus 142 ~a~n~~g~~~~~~~l~V~~~~ 162 (805)
.|.|..+ .+.|.|..++
T Consensus 83 ~a~n~~~----~~~l~V~~~P 99 (104)
T 2e6p_A 83 RTEGVSA----FFGVTVQDPS 99 (104)
T ss_dssp ECSSCCC----CEEEEEECCC
T ss_pred EECCceE----EEEEEEcCCC
Confidence 9988643 5667776654
No 497
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.37 E-value=3.7e-12 Score=107.94 Aligned_cols=93 Identities=11% Similarity=0.159 Sum_probs=72.5
Q ss_pred CCCeEEecCCCCceecCCCcEEEEEEEecCCCCC---ceEEEEECCEecC---CCCceEEEec------CcEEEEEEccc
Q psy2166 64 AKPVFIVPLKPEFKLGEAQPLHLEAQVEPKNDPN---LKIEWIFNGKPLE---LGSRFKTTAD------FGFVTLDLTEV 131 (805)
Q Consensus 64 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~---~~v~W~k~g~~i~---~~~~~~~~~~------~~~~~L~I~~~ 131 (805)
+.|.|+..+. .+.+.+|+.++|.|.+. |.|. +.|.|+|++.... .+.++.+... ....+|.|.++
T Consensus 3 p~p~f~~~p~-~~~v~~G~~v~L~C~~~--g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 79 (108)
T 3cx2_A 3 PIGLFVMRPQ-DGEVTVGGSITFSARVA--GASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDA 79 (108)
T ss_dssp CCCSCSBCCC-CEEEETTCCEEEEEEEE--CC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSC
T ss_pred CccEEEeCCC-cEEEeCCCCEEEEEEEC--CCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecC
Confidence 4577766554 78999999999999999 6777 8999999873221 2345554321 12568999999
Q ss_pred ccCCCeEEEEEEEeCCeeEEEEEEEEEe
Q psy2166 132 YDRDQGIYTCRAWNLAGETFTSTTIYCS 159 (805)
Q Consensus 132 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 159 (805)
+.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 80 ~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 80 QPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999999999885
No 498
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.37 E-value=1.1e-12 Score=108.31 Aligned_cols=80 Identities=16% Similarity=0.262 Sum_probs=68.8
Q ss_pred CCcccccCCCCeEEEEEEEeecCCCCeEEEEEECCEEccCCCCeEEEeeCcEEEEEEcCCCCCCCEEEEEEEEcCCccEE
Q psy2166 698 FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 777 (805)
Q Consensus 698 ~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 777 (805)
|.+. .+.+|+.+.|.|.+. | .|.+.|+|+|..+..+.++.+. .+ .|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 8 p~~~-~v~~G~~~~l~C~~~--~--~p~v~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a~n~~g~~~ 78 (95)
T 4hwu_A 8 PEAY-VVAPGESLELQCMLK--D--AAVISWTKDGVHLGPNNRTVLI--GE--YLQIKGATPRDSGLYACTAARTVDSET 78 (95)
T ss_dssp CEEE-EECTTSCEEEECCCC--T--TCEEEEEETTEEECCCSSEEEE--TT--EEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCcE-EECCCCEEEEEEEeC--C--CCEEEEEECCEECCCCceEEEe--CC--EEEECcCCcccCEEEEEEEccCCCcEE
Confidence 3444 799999999999987 6 4699999999999888777653 33 699999999999999999999999998
Q ss_pred EEEEEEEEE
Q psy2166 778 ISVNLECVV 786 (805)
Q Consensus 778 ~~~~l~V~~ 786 (805)
..+.|.|..
T Consensus 79 ~~~~l~V~~ 87 (95)
T 4hwu_A 79 WIFMVNVTD 87 (95)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEeC
Confidence 888888864
No 499
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=2.2e-12 Score=108.95 Aligned_cols=96 Identities=19% Similarity=0.159 Sum_probs=74.6
Q ss_pred CCeEEecCCCCceecCCCcEEEEEEEecC-CCCCceEEEEECCE-ecCC--CCceEEEec--C----cEEEEEEcccccC
Q psy2166 65 KPVFIVPLKPEFKLGEAQPLHLEAQVEPK-NDPNLKIEWIFNGK-PLEL--GSRFKTTAD--F----GFVTLDLTEVYDR 134 (805)
Q Consensus 65 ~p~~~~~~~~~~~v~~G~~v~L~C~~~~~-~~p~~~v~W~k~g~-~i~~--~~~~~~~~~--~----~~~~L~I~~~~~~ 134 (805)
.+.|+..+ .++.|.+|+.++|.|.+.+. +.|.|.|+|||++. .+.. +.++.+... . ..++|+|.+++.+
T Consensus 12 ~~~f~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 90 (118)
T 2edn_A 12 TGVFLKKP-DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLG 90 (118)
T ss_dssp SSSCSBCC-CCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTT
T ss_pred cceEEECC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChh
Confidence 45666655 57899999999999999843 24899999999752 2222 345555432 1 2578999999999
Q ss_pred CCeEEEEEEEeCCeeEEEEEEEEEecc
Q psy2166 135 DQGIYTCRAWNLAGETFTSTTIYCSTK 161 (805)
Q Consensus 135 D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 161 (805)
|+|.|+|.|.|..|..++.+.|+|..+
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 999999999999999999999999753
No 500
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.36 E-value=2.5e-12 Score=111.92 Aligned_cols=83 Identities=18% Similarity=0.171 Sum_probs=65.4
Q ss_pred ccCCCCeEEEEEEEeecC--CCCeEEEEEECCEEcc-----CCCCeEEEee---CcEEEEEEcCCCCCCCEEEEEEEEcC
Q psy2166 703 NLSEGEIAHFEASLIPVG--DQTMTVEFLYNGKPIE-----ASHRIRTVHA---FGMVVLEILGTKIEDTGVYTCRATNK 772 (805)
Q Consensus 703 ~v~~G~~~~l~C~~~~~g--~p~~~v~W~~~g~~l~-----~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~ 772 (805)
.+.+|+++.|.|.+. | .|.+.|.|+++|..+. ...+...... .....|.|.+++.+|+|.|+|.|.|.
T Consensus 19 ~v~~G~~v~L~C~~~--g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 19 ELSVGEKLVLNCTAR--TELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp EEEETCCEEEEEEEE--ECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred EEecCCeEEEEEEEE--cCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 789999999999999 6 5667999999987443 1112111111 13457999999999999999999999
Q ss_pred CccEEEEEEEEEEEe
Q psy2166 773 WGQAEISVNLECVVW 787 (805)
Q Consensus 773 ~G~~~~~~~l~V~~~ 787 (805)
.|....++.|.|...
T Consensus 97 ~g~~~~~~~l~V~~~ 111 (122)
T 3s35_X 97 LMTKKNSTFVRVHEK 111 (122)
T ss_dssp SCEEEEEEEEEEEEE
T ss_pred CCceEEEEEEEEecc
Confidence 999999999999764
Done!