Query psy2167
Match_columns 79
No_of_seqs 104 out of 195
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 18:02:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2167.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2167hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zara1 a.4.5.56 (A:2-90) Rio2 53.7 3.8 0.00028 23.7 2.2 18 48-65 18-35 (89)
2 d2gsca1 a.29.16.1 (A:9-125) Un 43.5 12 0.00086 21.4 3.3 39 17-56 74-112 (117)
3 d1v54e_ a.118.11.1 (E:) Cytoch 41.7 4.1 0.0003 24.4 0.9 22 45-66 23-44 (105)
4 d2hyja2 a.121.1.1 (A:83-200) P 41.5 15 0.0011 20.4 3.5 36 16-51 56-91 (118)
5 d2rlda1 a.29.16.1 (A:1-115) Un 38.5 19 0.0014 20.7 3.7 35 20-55 80-114 (115)
6 d2i10a2 a.121.1.1 (A:79-194) P 37.2 18 0.0013 20.0 3.4 37 16-52 56-92 (116)
7 d2vcha1 c.87.1.10 (A:6-476) Hy 32.9 12 0.00089 24.1 2.3 31 21-52 440-470 (471)
8 d1yzma1 a.2.19.1 (A:456-501) F 32.4 26 0.0019 17.8 3.1 29 17-45 10-38 (46)
9 d2aeea1 c.61.1.1 (A:1-208) Oro 31.6 18 0.0013 23.0 3.0 26 20-50 178-203 (208)
10 d2g7sa2 a.121.1.1 (A:77-192) P 30.3 25 0.0018 19.1 3.2 35 15-49 54-88 (116)
11 d1b4fa_ a.60.1.2 (A:) EphB2 re 29.9 24 0.0018 18.3 3.0 24 31-54 49-72 (74)
12 d1b0xa_ a.60.1.2 (A:) EphA4 re 28.2 37 0.0027 17.4 3.6 24 31-54 47-70 (72)
13 d1d2da_ a.16.1.3 (A:) Multifun 27.7 40 0.0029 17.6 5.3 40 20-61 11-50 (56)
14 d1a9xa1 a.92.1.1 (A:403-555) C 26.4 36 0.0026 20.6 3.7 34 20-55 85-122 (153)
15 d1g8ma1 c.24.1.3 (A:4-200) IMP 25.4 30 0.0022 22.2 3.2 34 20-53 128-174 (197)
16 d2fcwa1 a.13.1.1 (A:216-320) a 23.9 45 0.0033 19.5 3.6 35 22-57 11-45 (105)
17 d1t9ha2 c.37.1.8 (A:68-298) Pr 23.4 28 0.002 22.6 2.8 25 22-46 200-226 (231)
18 d1ucpa_ a.77.1.5 (A:) Apoptosi 23.2 24 0.0018 19.5 2.2 22 42-63 18-40 (91)
19 d1y14a_ a.60.8.2 (A:) RNA poly 23.1 13 0.00097 23.7 1.1 21 28-49 154-174 (176)
20 d1u0la2 c.37.1.8 (A:69-293) Pr 22.6 27 0.0019 22.5 2.6 25 22-46 197-223 (225)
21 d1wtya_ a.24.16.2 (A:) Probabl 22.2 58 0.0042 18.8 3.9 30 20-53 57-86 (116)
22 d1wuda1 a.60.8.1 (A:530-606) H 20.3 32 0.0024 18.1 2.3 17 38-54 4-20 (77)
No 1
>d1zara1 a.4.5.56 (A:2-90) Rio2 serine protein kinase N-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=53.67 E-value=3.8 Score=23.67 Aligned_cols=18 Identities=17% Similarity=0.333 Sum_probs=13.0
Q ss_pred HHHhcccccCcceecchh
Q psy2167 48 RRKLGSIISYDTVCVPLV 65 (79)
Q Consensus 48 R~~l~~L~~yDWVpIPLv 65 (79)
+.==....+|.|||+++.
T Consensus 18 ~aiE~gmrnhE~VP~~lI 35 (89)
T d1zara1 18 DAIFKNLWDYEYVPLQLI 35 (89)
T ss_dssp HHHHTTTTTCSSEEHHHH
T ss_pred HHHHhccccCccccHHHH
Confidence 333446788999999875
No 2
>d2gsca1 a.29.16.1 (A:9-125) Uncharacterized protein XCC0516 {Xanthomonas campestris pv. campestris [TaxId: 340]}
Probab=43.49 E-value=12 Score=21.37 Aligned_cols=39 Identities=13% Similarity=0.042 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhccccc
Q psy2167 17 WATNIINRARKEALISSDHVVQTLLYELSEHRRKLGSIIS 56 (79)
Q Consensus 17 Wa~~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~~L~~ 56 (79)
-.-.++.-|++.|.|+.+ .+..+.+++.+....++.+.+
T Consensus 74 E~~~~l~la~~~~~i~~~-~~~~l~~~~~ei~k~L~~~ik 112 (117)
T d2gsca1 74 ELDTQVQIAARLGYSRSE-DDQSVRRQVDLVFAKLTALMN 112 (117)
T ss_dssp HHHHHHHHHHHTTCSCHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 345678889999999755 688888888888777766543
No 3
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=41.69 E-value=4.1 Score=24.40 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=18.9
Q ss_pred HHHHHHhcccccCcceecchhh
Q psy2167 45 SEHRRKLGSIISYDTVCVPLVY 66 (79)
Q Consensus 45 ~~FR~~l~~L~~yDWVpIPLvY 66 (79)
=+.|+++.+|+.||-||=|=+-
T Consensus 23 we~rrgmN~l~~~DlVPeP~Ii 44 (105)
T d1v54e_ 23 WELRKGMNTLVGYDLVPEPKII 44 (105)
T ss_dssp HHHHHHHHHHTTSSBCCCHHHH
T ss_pred HHHHHHHHHHhccccCCCcHHH
Confidence 3689999999999999988654
No 4
>d2hyja2 a.121.1.1 (A:83-200) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=41.52 E-value=15 Score=20.38 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHh
Q psy2167 16 VWATNIINRARKEALISSDHVVQTLLYELSEHRRKL 51 (79)
Q Consensus 16 ~Wa~~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l 51 (79)
++....+.+|+++|-|..|.....+-..+...-.++
T Consensus 56 ~~l~~~l~~a~~~G~i~~~~d~~~lA~~l~~~~~G~ 91 (118)
T d2hyja2 56 EQLRADLTAAVDKGELPAGFDVEQALFEIVAAGLAL 91 (118)
T ss_dssp HHHHHHHHHHHHTTSSCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 578899999999999987655555555555444433
No 5
>d2rlda1 a.29.16.1 (A:1-115) Uncharacterized protein BT0352 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=38.51 E-value=19 Score=20.66 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcccc
Q psy2167 20 NIINRARKEALISSDHVVQTLLYELSEHRRKLGSII 55 (79)
Q Consensus 20 ~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~~L~ 55 (79)
..+.-|++.|.++.+ .+..+.+|+.+...-|+.+.
T Consensus 80 ~~l~la~~~~~i~~~-~~~~l~~~~~ei~k~L~~~i 114 (115)
T d2rlda1 80 YWLELLIRTEYITRE-QYESINNDSTEINKLLISII 114 (115)
T ss_dssp HHHHHHHHTTSSCHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHH-HHHHHHHHHHHHHHHHHHHh
Confidence 456678889999866 68899999998888776543
No 6
>d2i10a2 a.121.1.1 (A:79-194) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=37.16 E-value=18 Score=19.96 Aligned_cols=37 Identities=8% Similarity=-0.030 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhc
Q psy2167 16 VWATNIINRARKEALISSDHVVQTLLYELSEHRRKLG 52 (79)
Q Consensus 16 ~Wa~~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~ 52 (79)
.++...+.+|.++|.|.++.....+-+-+...-.++.
T Consensus 56 ~~l~~~l~~a~~~Gel~~~~d~~~lA~~l~~~~~Gl~ 92 (116)
T d2i10a2 56 QTVLDRFEKALADGDLPAGTDCTALARYVMAAVYGLS 92 (116)
T ss_dssp HHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4678889999999999876556666555555544443
No 7
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=32.88 E-value=12 Score=24.06 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=21.9
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhc
Q psy2167 21 IINRARKEALISSDHVVQTLLYELSEHRRKLG 52 (79)
Q Consensus 21 ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~ 52 (79)
.+++|.+||= .|...+..++++.+++|+...
T Consensus 440 ~~~~a~~~gG-~s~~~~~~~~~~~~~~~~~~~ 470 (471)
T d2vcha1 440 AACRVLKDDG-TSTKALSLVALKWKAHKKELE 470 (471)
T ss_dssp HHHHHTSTTS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-CHHHHHHHHHHHHHHhhHhhc
Confidence 3455545542 567788999999999998653
No 8
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.44 E-value=26 Score=17.77 Aligned_cols=29 Identities=21% Similarity=0.222 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy2167 17 WATNIINRARKEALISSDHVVQTLLYELS 45 (79)
Q Consensus 17 Wa~~ll~~ar~eg~i~~~~~~~~l~~ei~ 45 (79)
=.-+.++.|+..|+++.-..+..-+.||.
T Consensus 10 ~ik~yI~QAk~a~R~dEV~~Le~NLreLq 38 (46)
T d1yzma1 10 NITSFIRQAKAAGRMDEVRTLQENLRQLQ 38 (46)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34567899999999885444444444443
No 9
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}
Probab=31.61 E-value=18 Score=22.95 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=21.2
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2167 20 NIINRARKEALISSDHVVQTLLYELSEHRRK 50 (79)
Q Consensus 20 ~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~ 50 (79)
.|+..++++|+|+++ ..++|++|+++
T Consensus 178 dll~~~~~~~~i~~~-----~~~~i~~~~~~ 203 (208)
T d2aeea1 178 ELIAVAKLQGYITND-----GLHLLKKFKED 203 (208)
T ss_dssp HHHHHHHHHTSSCHH-----HHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCHH-----HHHHHHHHHhC
Confidence 688999999999864 47888888864
No 10
>d2g7sa2 a.121.1.1 (A:77-192) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=30.29 E-value=25 Score=19.12 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2167 15 LVWATNIINRARKEALISSDHVVQTLLYELSEHRR 49 (79)
Q Consensus 15 i~Wa~~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~ 49 (79)
.+|...++.++.++|-|.++.....+-..+...-.
T Consensus 54 ~~~l~~~l~~a~~~g~~~~~~d~~~lA~~l~~~~~ 88 (116)
T d2g7sa2 54 SDWLTAVLERGIAQGRLVLTGTARANAEIFMATVH 88 (116)
T ss_dssp HHHHHHHHHHHHHTTCBCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHH
Confidence 36899999999999988766545555555444433
No 11
>d1b4fa_ a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.92 E-value=24 Score=18.33 Aligned_cols=24 Identities=13% Similarity=0.242 Sum_probs=20.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccc
Q psy2167 31 ISSDHVVQTLLYELSEHRRKLGSI 54 (79)
Q Consensus 31 i~~~~~~~~l~~ei~~FR~~l~~L 54 (79)
|++...-++++.+|++.|+++..+
T Consensus 49 I~~~ghr~ril~~i~~Lr~~~~~~ 72 (74)
T d1b4fa_ 49 VTLAGHQKKILNSIQVMRAQMNQI 72 (74)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHh
Confidence 677778899999999999988654
No 12
>d1b0xa_ a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.17 E-value=37 Score=17.43 Aligned_cols=24 Identities=13% Similarity=0.225 Sum_probs=20.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccc
Q psy2167 31 ISSDHVVQTLLYELSEHRRKLGSI 54 (79)
Q Consensus 31 i~~~~~~~~l~~ei~~FR~~l~~L 54 (79)
|++...-++++..|...|+++..+
T Consensus 47 I~~~ghr~ki~~ai~~Lr~~~~~~ 70 (72)
T d1b0xa_ 47 ITAITHQNKILSSVQAMRTQMQQM 70 (72)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 777778899999999999998765
No 13
>d1d2da_ a.16.1.3 (A:) Multifunctional Glu-Pro-tRNA synthase (EPRS) second repeated element {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=27.68 E-value=40 Score=17.55 Aligned_cols=40 Identities=10% Similarity=0.097 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcccccCccee
Q psy2167 20 NIINRARKEALISSDHVVQTLLYELSEHRRKLGSIISYDTVC 61 (79)
Q Consensus 20 ~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~~L~~yDWVp 61 (79)
+++|+-..++ .+......-+++|.+.+.++..+..=||-|
T Consensus 11 d~VR~LKa~k--a~K~~i~~aV~~LL~LK~~yk~~tG~d~kp 50 (56)
T d1d2da_ 11 EVVRKLKAEK--APKAKVTEAVECLLSLKAEYKEKTGKEYVP 50 (56)
T ss_dssp HHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHCSSSSSSCCC
T ss_pred HHHHHHHccC--CCHHHHHHHHHHHHHHHHHHHHhhCCCCCC
Confidence 4566666666 344568999999999999999999999976
No 14
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]}
Probab=26.38 E-value=36 Score=20.56 Aligned_cols=34 Identities=12% Similarity=0.206 Sum_probs=25.6
Q ss_pred HHHHHHHHhcCCCCHHHHHHHH----HHHHHHHHHhcccc
Q psy2167 20 NIINRARKEALISSDHVVQTLL----YELSEHRRKLGSII 55 (79)
Q Consensus 20 ~ll~~ar~eg~i~~~~~~~~l~----~ei~~FR~~l~~L~ 55 (79)
.++++|.+.| -||.....++ ++|++.|.+++..-
T Consensus 85 ~~l~~aK~~G--FSD~~ia~l~~~~e~~vr~~R~~~~i~p 122 (153)
T d1a9xa1 85 DFLRQLKRKG--FADARLAKLAGVREAEIRKLRDQYDLHP 122 (153)
T ss_dssp HHHHHHHHTT--CCHHHHHHHTTSCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHcC--CCHHHHHHHHcCcHHHHHHHHHHccCCC
Confidence 4678888888 5776666654 49999999987653
No 15
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.39 E-value=30 Score=22.21 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=25.1
Q ss_pred HHHHHHHHhcC----CCCHHHHHHHHHHHH---------HHHHHhcc
Q psy2167 20 NIINRARKEAL----ISSDHVVQTLLYELS---------EHRRKLGS 53 (79)
Q Consensus 20 ~ll~~ar~eg~----i~~~~~~~~l~~ei~---------~FR~~l~~ 53 (79)
+|+|.|.|-.. +.++..+..+++|+. +||++|+.
T Consensus 128 sliRAAAKN~~~V~Vl~dP~dY~~~i~~l~~~~~~~~s~~~Rk~LA~ 174 (197)
T d1g8ma1 128 ALLRAAAKNHARVTVVCDPADYSSVAKEMAASKDKDTSVETRRHLAL 174 (197)
T ss_dssp HHHHHHHHTTTTCEEECCGGGHHHHHHHHHTSTTSSCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeEeccHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Confidence 67887777543 456778999999984 58888763
No 16
>d2fcwa1 a.13.1.1 (A:216-320) alpha-2-Macroglobulin receptor associated protein (RAP) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.93 E-value=45 Score=19.50 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=27.2
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcccccC
Q psy2167 22 INRARKEALISSDHVVQTLLYELSEHRRKLGSIISY 57 (79)
Q Consensus 22 l~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~~L~~y 57 (79)
|-+...++.++.| .+..+=+||+-|-+.+..+..|
T Consensus 11 LW~~A~~~nFt~~-EL~SlkeEL~HfE~rl~K~rH~ 45 (105)
T d2fcwa1 11 LWDLAQSANLTDK-ELEAFREELKHFEAKIEKHNHY 45 (105)
T ss_dssp HHHHHHTSCCCHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455567777755 7999999999999998877654
No 17
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=23.42 E-value=28 Score=22.56 Aligned_cols=25 Identities=8% Similarity=0.211 Sum_probs=20.2
Q ss_pred HHHHHHhcCCCCHH--HHHHHHHHHHH
Q psy2167 22 INRARKEALISSDH--VVQTLLYELSE 46 (79)
Q Consensus 22 l~~ar~eg~i~~~~--~~~~l~~ei~~ 46 (79)
+++|.++|.|.... .+.++++|+++
T Consensus 200 V~~av~~g~i~~~Ry~~Y~~l~~e~~~ 226 (231)
T d1t9ha2 200 VKQAVEDGELKQYRYDHYVEFMTEIKD 226 (231)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 67899999998664 67888888865
No 18
>d1ucpa_ a.77.1.5 (A:) Apoptosis-associated speck-like protein Asc {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.16 E-value=24 Score=19.52 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=16.5
Q ss_pred HHHHHHHHHhcccc-cCcceecc
Q psy2167 42 YELSEHRRKLGSII-SYDTVCVP 63 (79)
Q Consensus 42 ~ei~~FR~~l~~L~-~yDWVpIP 63 (79)
+|+++|+..|.... .-..-+||
T Consensus 18 ~ElkkFK~~L~~~~l~~~~~~Ip 40 (91)
T d1ucpa_ 18 EELKKFKLKLLSVPLREGYGRIP 40 (91)
T ss_dssp HHHHHHHHHTTTSCCCSSSCCCC
T ss_pred HHHHHHHHHHCcccccccCCCCC
Confidence 58999999997643 55666777
No 19
>d1y14a_ a.60.8.2 (A:) RNA polymerase II subunit RBP4 (RpoF) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.12 E-value=13 Score=23.68 Aligned_cols=21 Identities=33% Similarity=0.396 Sum_probs=17.0
Q ss_pred hcCCCCHHHHHHHHHHHHHHHH
Q psy2167 28 EALISSDHVVQTLLYELSEHRR 49 (79)
Q Consensus 28 eg~i~~~~~~~~l~~ei~~FR~ 49 (79)
+|++. |..++.++++|.++|+
T Consensus 154 ~~k~~-de~Lq~IL~~L~~~r~ 174 (176)
T d1y14a_ 154 NNKIS-DDELERILKELSNLET 174 (176)
T ss_dssp TTTSC-HHHHHHHHHHHHHHCC
T ss_pred cccCC-HHHHHHHHHHHHHhhc
Confidence 45665 5689999999999984
No 20
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.60 E-value=27 Score=22.54 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=19.9
Q ss_pred HHHHHHhcCCCCHH--HHHHHHHHHHH
Q psy2167 22 INRARKEALISSDH--VVQTLLYELSE 46 (79)
Q Consensus 22 l~~ar~eg~i~~~~--~~~~l~~ei~~ 46 (79)
+++|.++|.|.... .+.++.+|+++
T Consensus 197 Vk~av~~g~i~~~Ry~~Y~~l~~el~~ 223 (225)
T d1u0la2 197 VKEAVENGEIAESRYENYVKMFYELLG 223 (225)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 68899999998664 67788888864
No 21
>d1wtya_ a.24.16.2 (A:) Probable nucleotidyltransferase subunit TTHA0048 {Thermus thermophilus [TaxId: 274]}
Probab=22.16 E-value=58 Score=18.78 Aligned_cols=30 Identities=23% Similarity=0.242 Sum_probs=19.9
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcc
Q psy2167 20 NIINRARKEALISSDHVVQTLLYELSEHRRKLGS 53 (79)
Q Consensus 20 ~ll~~ar~eg~i~~~~~~~~l~~ei~~FR~~l~~ 53 (79)
+++++|.+.|+|.++. .+-++.+=|+...-
T Consensus 57 ~~~r~A~~~glI~d~~----~W~~m~~~RN~tsH 86 (116)
T d1wtya_ 57 AAIRGAFQVGLLPEDP----FWLEMLELRNLTNH 86 (116)
T ss_dssp HHHHHHHHHTSSCCCH----HHHHHHHHHHHGGG
T ss_pred HHHHHHHHcCCCCCHH----HHHHHHHHhhhhch
Confidence 5789999999998763 34444444655443
No 22
>d1wuda1 a.60.8.1 (A:530-606) HRDC domain from RecQ helicase {Escherichia coli [TaxId: 562]}
Probab=20.34 E-value=32 Score=18.12 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHhccc
Q psy2167 38 QTLLYELSEHRRKLGSI 54 (79)
Q Consensus 38 ~~l~~ei~~FR~~l~~L 54 (79)
+.+.++|+++|..++.-
T Consensus 4 ~~L~~~L~~~R~~~A~~ 20 (77)
T d1wuda1 4 RKLFAKLRKLRKSIADE 20 (77)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 36789999999998753
Done!