RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2167
         (79 letters)



>d1vqok1 b.39.1.1 (K:1-132) Ribosomal protein L14 {Archaeon
           Haloarcula marismortui [TaxId: 2238]}
          Length = 132

 Score = 22.4 bits (48), Expect = 6.4
 Identities = 4/25 (16%), Positives = 11/25 (44%)

Query: 46  EHRRKLGSIISYDTVCVPLVYTQQN 70
             RR  G+ + ++     +V   ++
Sbjct: 79  PIRRPDGTRVKFEDNAAVIVDENED 103


>d1t98a1 a.4.5.65 (A:8-118) Chromosome partition protein MukF
          (KicB), N-terminal domain {Escherichia coli [TaxId:
          562]}
          Length = 111

 Score = 22.5 bits (48), Expect = 6.7
 Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 3/35 (8%)

Query: 14 PLVWATNIINRARKEALIS---SDHVVQTLLYELS 45
            V A N IN   ++ L++   S+      +Y L+
Sbjct: 63 IGVRANNAINDMVRQRLLNRFTSEQAEGNAIYRLT 97


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.133    0.408 

Gapped
Lambda     K      H
   0.267   0.0653    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 282,102
Number of extensions: 9304
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 2
Length of query: 79
Length of database: 2,407,596
Length adjustment: 45
Effective length of query: 34
Effective length of database: 1,789,746
Effective search space: 60851364
Effective search space used: 60851364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.0 bits)