Your job contains 1 sequence.
>psy2168
MGSVHAKEIPSQPYDELDSDPNDAMLGHVMVAPARVDRVKVEGIGRTYDDIITDSIKQTE
IFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYEITFRVKELKRY
RAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLRKPFFGPIDSML
SGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNSIEWNGLIREIQPASRGTPFAIRE
SAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLHRVVHRYT
LKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLFQVNYPLGPYITA
QASLDAGLLGSFSQDKTFTLCDRFFLGGPLGLRGFAHYGIGPKSGGSSLGGTVYWQGAYH
IYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYGIGLAIR
FAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2168
(516 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C8A2 - symbol:SAMM50 "Uncharacterized protein... 428 2.8e-80 2
ZFIN|ZDB-GENE-040426-806 - symbol:samm50 "sorting and ass... 433 8.4e-79 2
ZFIN|ZDB-GENE-041114-30 - symbol:samm50l "sorting and ass... 434 3.6e-78 2
UNIPROTKB|Q2HJ55 - symbol:SAMM50 "Sorting and assembly ma... 454 5.7e-43 1
MGI|MGI:1915903 - symbol:Samm50 "sorting and assembly mac... 445 5.2e-42 1
UNIPROTKB|Q9Y512 - symbol:SAMM50 "Sorting and assembly ma... 445 5.2e-42 1
UNIPROTKB|E2QSZ0 - symbol:SAMM50 "Uncharacterized protein... 444 6.6e-42 1
UNIPROTKB|F6UPR4 - symbol:SAMM50 "Uncharacterized protein... 444 6.6e-42 1
RGD|1303219 - symbol:Samm50 "sorting and assembly machine... 438 2.8e-41 1
UNIPROTKB|G3MZZ3 - symbol:SAMM50 "Sorting and assembly ma... 421 1.8e-39 1
UNIPROTKB|A8MZI2 - symbol:SAMM50 "Sorting and assembly ma... 379 5.1e-35 1
FB|FBgn0033989 - symbol:CG7639 species:7227 "Drosophila m... 359 6.7e-33 1
UNIPROTKB|I3LLW3 - symbol:SAMM50 "Uncharacterized protein... 323 8.5e-29 1
WB|WBGene00001662 - symbol:gop-3 species:6239 "Caenorhabd... 265 1.9e-20 1
UNIPROTKB|G4N9M6 - symbol:MGG_09978 "Sorting assembly mac... 185 8.8e-19 2
UNIPROTKB|I3LQ32 - symbol:CGI-51 "Uncharacterized protein... 230 1.8e-18 1
POMBASE|SPAC17C9.06 - symbol:sam50 "mitochondrial sorting... 243 9.9e-18 1
TAIR|locus:2074618 - symbol:AT3G11070 "AT3G11070" species... 159 6.0e-13 2
SGD|S000004971 - symbol:SAM50 "Essential component of the... 191 2.6e-12 2
CGD|CAL0004681 - symbol:SAM50 species:5476 "Candida albic... 191 7.7e-12 1
UNIPROTKB|Q5A4H6 - symbol:CaO19.7358 "Putative uncharacte... 191 7.7e-12 1
TAIR|locus:2169702 - symbol:AT5G05520 "AT5G05520" species... 152 2.5e-11 2
ASPGD|ASPL0000065328 - symbol:AN10873 species:162425 "Eme... 169 2.1e-09 1
UNIPROTKB|Q48LL0 - symbol:bamA "Outer membrane protein as... 118 8.6e-06 2
UNIPROTKB|Q2GD52 - symbol:bamA "Outer membrane protein as... 98 9.4e-06 2
TIGR_CMR|NSE_0718 - symbol:NSE_0718 "outer membrane prote... 98 9.4e-06 2
UNIPROTKB|Q74AT3 - symbol:yaeT "Outer membrane protein as... 124 0.00032 1
TIGR_CMR|GSU_2268 - symbol:GSU_2268 "outer membrane prote... 124 0.00032 1
>UNIPROTKB|E1C8A2 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401 CTD:25813
GeneTree:ENSGT00390000011355 OMA:DTRNSSI EMBL:AADN02006711
IPI:IPI00602465 RefSeq:XP_416458.2 UniGene:Gga.10268
ProteinModelPortal:E1C8A2 Ensembl:ENSGALT00000022959 GeneID:418234
KEGG:gga:418234 NextBio:20821433 Uniprot:E1C8A2
Length = 469
Score = 428 (155.7 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 110/306 (35%), Positives = 165/306 (53%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGH----VMVAP-AR----------VDRVKVEGIG 45
MG+VHA+ + P S P+ LG V V P A+ V V +G+G
Sbjct: 1 MGTVHARSLEPLPA----SGPDFGALGEEAELVEVEPEAKQEILENKDVVVQHVHFDGLG 56
Query: 46 RTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPE 105
RT DDII I ++FK+ ++ + HE R +L RL F+QV++ ID +G DA P
Sbjct: 57 RTRDDIIMYEI--ADVFKAKNLIDVMRKSHEAREKLLRLGIFRQVEVLIDTCQGDDALP- 113
Query: 106 HGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYN 165
+G ++TF V EL+R T +GNNEGS+V+ K PNL GR E + YGTK Y
Sbjct: 114 NGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKFPNLLGRAEKVTFQFSYGTKETSYG 173
Query: 166 LTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIK--NSIEWNGL 223
L+ KP G + S +L + + P SS + ++G+ ++ FP K ++++W G+
Sbjct: 174 LSFFKPQPGNFERNFSVNLYKVTGQFPWSSLRETDRGISTEFN--FPIWKTNHTLKWEGV 231
Query: 224 IREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GG 282
RE+ +R F++RE +G++LKSS+ +D R+ ILP+ G + + E AG GG
Sbjct: 232 WRELGCLARTASFSVREESGHSLKSSISHAMVIDSRNSSILPKRGALLKINQELAGYTGG 291
Query: 283 DVGFQK 288
DV F K
Sbjct: 292 DVSFLK 297
Score = 397 (144.8 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 87/220 (39%), Positives = 122/220 (55%)
Query: 299 YTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGFQKYSSLFQVNYPLGPY 357
++LKSS+ +D R+ ILP+ G + + E AG GGDV F K FQ+N L
Sbjct: 252 HSLKSSISHAMVIDSRNSSILPKRGALLKINQELAGYTGGDVSFLKEDFEFQLNKQLLWD 311
Query: 358 ITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQG 417
ASL G+L DK ++ D + Y IGP+S G LGG YW G
Sbjct: 312 SVFSASLWGGMLVPIG-DKPSSIADRFYLGGPTSVRGFSMYSIGPQSDGDYLGGEAYWAG 370
Query: 418 AYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASE-ITSKWRKLGEELRISYGIG 476
H+YTPLPF +P +G F D FR +FF NAG++ +++ + + +KL E +R SYG G
Sbjct: 371 GLHLYTPLPF-RPGRGGFGDLFRTHFFLNAGNLCNLNYGDGPKAHLQKLAEYIRWSYGAG 429
Query: 477 LAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
+ +R +AR+E+NYCFP Q D + G+QFG GI F+
Sbjct: 430 IVLRLGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL 469
>ZFIN|ZDB-GENE-040426-806 [details] [associations]
symbol:samm50 "sorting and assembly machinery
component 50 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0019867 "outer membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
ZFIN:ZDB-GENE-040426-806 GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775
CTD:25813 OrthoDB:EOG4H72BD HOGENOM:HOG000015411 EMBL:BC044493
IPI:IPI00488752 RefSeq:NP_956436.1 UniGene:Dr.80333
ProteinModelPortal:Q803G5 STRING:Q803G5 PRIDE:Q803G5 GeneID:393111
KEGG:dre:393111 InParanoid:Q803G5 NextBio:20814184
ArrayExpress:Q803G5 Uniprot:Q803G5
Length = 469
Score = 433 (157.5 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 108/302 (35%), Positives = 165/302 (54%)
Query: 1 MGSVHAKEIPSQPYD--ELDSDPNDAMLGH--------VMV-APARVDRVKVEGIGRTYD 49
MG+VHA+ + P EL +D LG V+ V V ++G+GRT +
Sbjct: 1 MGTVHARSLDPLPMQGPELGVQADDMDLGEPEREEKQEVLENKDVVVQHVHIDGLGRTKE 60
Query: 50 DIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYE 109
DI+T I ++F + ++ + HE R +L RL F+ V++ ID ++G DA P +G +
Sbjct: 61 DILTYEI--ADVFHAKNLIDVMKKSHEARQKLLRLGIFRHVEVVIDTAEGADALP-NGLD 117
Query: 110 ITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLR 169
+TF V+EL+R T +GNNEGS+V+ K+PN+ GR E + YGTK Y L+
Sbjct: 118 VTFEVRELRRMTGSYNTMVGNNEGSMVLGIKLPNVLGRAEKLTFQFSYGTKETSYGLSFF 177
Query: 170 KPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGLIREI 227
KP G + S +L + + P SS + ++G+ + I FP + S ++W G+ RE+
Sbjct: 178 KPQPGHFERNFSLNLYKVTGQFPWSSLRETDRGVSAE--ISFPIWRTSHTLKWEGVWREL 235
Query: 228 QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGF 286
+R FA+RE +G++LKSSL +D R+ ILPR G + + E AG GGDV F
Sbjct: 236 GCLARTASFAVREESGHSLKSSLAHAMVIDTRNSTILPRKGALLKINQELAGYTGGDVSF 295
Query: 287 QK 288
K
Sbjct: 296 LK 297
Score = 378 (138.1 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 86/220 (39%), Positives = 118/220 (53%)
Query: 299 YTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGFQKYSSLFQVNYPLGPY 357
++LKSSL +D R+ ILPR G + + E AG GGDV F K Q+N L
Sbjct: 252 HSLKSSLAHAMVIDTRNSTILPRKGALLKINQELAGYTGGDVSFLKEDFEIQLNKTLFWD 311
Query: 358 ITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQG 417
SL G+L + K ++ D + Y IGP+S G LGG YW G
Sbjct: 312 SVLSTSLWGGMLLPLGE-KASSIADRFYLGGPTSVRGFSMYSIGPQSEGDYLGGEAYWAG 370
Query: 418 AYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASE-ITSKWRKLGEELRISYGIG 476
H+YTPLPF +P +G F D FR +FF NAG++ +++ E + KL E +R SYG G
Sbjct: 371 GVHLYTPLPF-RPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLSKLAECIRWSYGAG 429
Query: 477 LAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
+ +R +AR+E+NYC P Q D + G+QFG GI F+
Sbjct: 430 IVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL 469
>ZFIN|ZDB-GENE-041114-30 [details] [associations]
symbol:samm50l "sorting and assembly machinery
component 50 homolog, like" species:7955 "Danio rerio" [GO:0019867
"outer membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005741 "mitochondrial outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 ZFIN:ZDB-GENE-041114-30
GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775 OrthoDB:EOG4H72BD
HOGENOM:HOG000015411 EMBL:BC085536 IPI:IPI00489535
RefSeq:NP_001007344.1 UniGene:Dr.124972 ProteinModelPortal:Q5U3I0
GeneID:492471 KEGG:dre:492471 CTD:492471 NextBio:20865031
Uniprot:Q5U3I0
Length = 469
Score = 434 (157.8 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 105/300 (35%), Positives = 162/300 (54%)
Query: 1 MGSVHAKEIPSQPYDELDSDPN-DAMLGHVMVAPAR----------VDRVKVEGIGRTYD 49
MG+VHA+ + S P D N D M V + V V +EG+GRT +
Sbjct: 1 MGTVHARSMDSYPMYGRDLGVNTDDMEVMEAVQETKQEVLENKDVVVQHVNIEGLGRTKE 60
Query: 50 DIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYE 109
D + I +++F + +++ + HE R +L RL F+ V++ ID S+G DA P +G +
Sbjct: 61 DYLGYEI--SDVFTARNLVEVMRKSHEARQRLLRLGIFRDVEVVIDISEGADALP-NGLD 117
Query: 110 ITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLR 169
+TF V ELKR T +GNNEGS+V+ K+PN+ GRGE + YGTK Y L+
Sbjct: 118 VTFEVTELKRLTGSYNTMVGNNEGSMVLGIKLPNMLGRGEKLTFQFSYGTKETSYGLSFF 177
Query: 170 KPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNSIEWNGLIREIQP 229
KP G + + +L + + P SS K ++G+ + ++ ++++W G+ RE+
Sbjct: 178 KPQSGYFERNFTVNLYKVTGQFPWSSLKETDRGVSTELSLPLWMTDHTLKWEGVWRELGC 237
Query: 230 ASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGFQK 288
+R FA+RE +G+TLKS+L +D R+ ILPR G + + E AG GGD F K
Sbjct: 238 LARSASFAVREESGHTLKSALSHTMVVDTRNSAILPRKGALLRINQELAGYTGGDANFLK 297
Score = 371 (135.7 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 85/220 (38%), Positives = 116/220 (52%)
Query: 299 YTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGFQKYSSLFQVNYPLGPY 357
+TLKS+L +D R+ ILPR G + + E AG GGD F K Q+N
Sbjct: 252 HTLKSALSHTMVVDTRNSAILPRKGALLRINQELAGYTGGDANFLKEDVELQLNKQFIWG 311
Query: 358 ITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQG 417
ASL G++ T ++ D Y IGP+S G LGG YW G
Sbjct: 312 SVLSASLWGGMIYPLGAQPT-SIADRFYLGGPTSVRGFGMYSIGPQSEGDYLGGEAYWAG 370
Query: 418 AYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASE-ITSKWRKLGEELRISYGIG 476
H+YTPLPF + KG +D FR +FF NAG+I +++ E + +KL E +R SYG G
Sbjct: 371 GLHLYTPLPF-RSNKGGLADLFRTHFFLNAGNICNLNYGEGPRAHLQKLAECIRWSYGAG 429
Query: 477 LAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
+ +R +AR+E+NYCFP Q D + G+QFG GI F+
Sbjct: 430 IILRLGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL 469
>UNIPROTKB|Q2HJ55 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9913 "Bos taurus" [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021
GO:GO:0005741 EMBL:BT025460 EMBL:BC113305 IPI:IPI00705726
RefSeq:NP_001040088.1 UniGene:Bt.1696 ProteinModelPortal:Q2HJ55
DNASU:618777 GeneID:618777 KEGG:bta:618777 CTD:25813
NextBio:20901345 Uniprot:Q2HJ55
Length = 469
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 116/306 (37%), Positives = 168/306 (54%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGH----VMVAP-AR----------VDRVKVEGIG 45
MG+VHA+ + P S P+ LG V V P A+ V V +G+G
Sbjct: 1 MGTVHARSLEPLPA----SGPDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLG 56
Query: 46 RTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPE 105
RT DDII I+ ++FK+ +++ + HE R +L RL F+QV + ID +G DA P
Sbjct: 57 RTKDDIIMYEIR--DVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDDALP- 113
Query: 106 HGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYN 165
+G ++TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y
Sbjct: 114 NGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYG 173
Query: 166 LTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGL 223
L+ KP G D S +L + + P SS + ++G+ +Y+ FPT K S ++W G+
Sbjct: 174 LSFFKPQPGNFDRNFSVNLYKVTGQFPWSSLRETDRGVSAEYS--FPTWKTSHTVKWEGV 231
Query: 224 IREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GG 282
RE+ SR FA+R+ +G++LKSSL +D R+ ILP+ G + + E AG GG
Sbjct: 232 WRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGALLKVNQELAGYTGG 291
Query: 283 DVGFQK 288
DV F K
Sbjct: 292 DVSFLK 297
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 91/247 (36%), Positives = 134/247 (54%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILP+ G + + E
Sbjct: 225 TVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGALLKVNQE 284
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N L ASL G+L DK ++ D
Sbjct: 285 LAGYTGGDVSFLKEDFELQLNKQLILDTVFSASLWGGMLVPMG-DKPSSIADRFYLGGPT 343
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + +GP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 344 SVRGFSMHSVGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 402
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQF 509
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P QR D + G+QF
Sbjct: 403 CNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQRGDRICDGVQF 462
Query: 510 GFGITFI 516
G GI F+
Sbjct: 463 GAGIRFL 469
>MGI|MGI:1915903 [details] [associations]
symbol:Samm50 "sorting and assembly machinery component 50
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0001401
"mitochondrial sorting and assembly machinery complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0019867 "outer membrane"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=ISO] InterPro:IPR000184 Pfam:PF01103
MGI:MGI:1915903 GO:GO:0016021 GO:GO:0005743 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 CTD:25813 GeneTree:ENSGT00390000011355
OMA:DTRNSSI HOVERGEN:HBG054614 OrthoDB:EOG4H72BD EMBL:AK039949
EMBL:BC119180 EMBL:BC119178 EMBL:AK159740 EMBL:AK161378
EMBL:AK167806 EMBL:AK169351 EMBL:AK169066 EMBL:AK168510
EMBL:AK144975 EMBL:AK084395 EMBL:AK041783 IPI:IPI00221608
RefSeq:NP_848729.1 UniGene:Mm.290725 ProteinModelPortal:Q8BGH2
SMR:Q8BGH2 IntAct:Q8BGH2 STRING:Q8BGH2 PhosphoSite:Q8BGH2
REPRODUCTION-2DPAGE:Q8BGH2 PaxDb:Q8BGH2 PRIDE:Q8BGH2
Ensembl:ENSMUST00000023071 GeneID:68653 KEGG:mmu:68653
UCSC:uc007xbx.1 HOGENOM:HOG000015411 InParanoid:Q8BGH2
NextBio:327634 Bgee:Q8BGH2 Genevestigator:Q8BGH2 Uniprot:Q8BGH2
Length = 469
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 113/302 (37%), Positives = 161/302 (53%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGHVMVAP-AR----------VDRVKVEGIGRTYD 49
MG+VHA+ + P D V V P A+ V V +G+GRT D
Sbjct: 1 MGTVHARSLEPLPSSGTDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLGRTKD 60
Query: 50 DIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYE 109
DII I E+FK+ +++ + HE R +L RL F+QV + ID G DA P +G +
Sbjct: 61 DIIICEIG--EVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTCHGEDALP-NGLD 117
Query: 110 ITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLR 169
+TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y L+
Sbjct: 118 VTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFF 177
Query: 170 KPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGLIREI 227
KP G + S +L + + P SS + ++G+ +Y+ FP K S ++W G+ RE+
Sbjct: 178 KPQPGNFERNFSVNLYKVTGQFPWSSLRETDRGVSAEYS--FPLWKTSHTVKWEGVWREL 235
Query: 228 QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGF 286
SR FA+R+ +G++LKSSL +D R+ ILPR G + + E AG GGDV F
Sbjct: 236 GCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALFKVNQELAGYTGGDVSF 295
Query: 287 QK 288
K
Sbjct: 296 IK 297
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 92/247 (37%), Positives = 133/247 (53%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILPR G + + E
Sbjct: 225 TVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALFKVNQE 284
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N PL SL G+L DK ++ D
Sbjct: 285 LAGYTGGDVSFIKEDFELQLNKPLALDSVFSTSLWGGMLVPIG-DKPSSIADRFYLGGPT 343
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + IGP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 344 SVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 402
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQF 509
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P Q D + G+QF
Sbjct: 403 CNLNYGEGPKAHIRKLAECIRWSYGAGVVLRLGNIARLELNYCIPMGVQGGDRICDGVQF 462
Query: 510 GFGITFI 516
G GI F+
Sbjct: 463 GAGIRFL 469
>UNIPROTKB|Q9Y512 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9606 "Homo sapiens" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006626 "protein targeting to mitochondrion"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IDA]
[GO:0001401 "mitochondrial sorting and assembly machinery complex"
evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0045040 "protein
import into mitochondrial outer membrane" evidence=IDA]
Reactome:REACT_17015 InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021
GO:GO:0005743 EMBL:CH471138 GO:GO:0044267 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 EMBL:AL035398 CTD:25813 OMA:DTRNSSI
EMBL:AF151809 EMBL:AY189688 EMBL:AK001087 EMBL:CR456483
EMBL:AK222657 EMBL:BC007830 EMBL:BC011681 EMBL:BC015200
IPI:IPI00412713 RefSeq:NP_056195.3 UniGene:Hs.505824
ProteinModelPortal:Q9Y512 SMR:Q9Y512 IntAct:Q9Y512
MINT:MINT-1451034 STRING:Q9Y512 PhosphoSite:Q9Y512 DMDM:118572715
PaxDb:Q9Y512 PeptideAtlas:Q9Y512 PRIDE:Q9Y512 DNASU:25813
Ensembl:ENST00000350028 GeneID:25813 KEGG:hsa:25813 UCSC:uc003bej.3
GeneCards:GC22P044342 HGNC:HGNC:24276 HPA:HPA034537 MIM:612058
neXtProt:NX_Q9Y512 PharmGKB:PA142670954 HOVERGEN:HBG054614
OrthoDB:EOG4H72BD PhylomeDB:Q9Y512 ChiTaRS:SAMM50 GenomeRNAi:25813
NextBio:47039 ArrayExpress:Q9Y512 Bgee:Q9Y512 CleanEx:HS_SAMM50
Genevestigator:Q9Y512 GermOnline:ENSG00000100347 Uniprot:Q9Y512
Length = 469
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 115/306 (37%), Positives = 166/306 (54%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGH----VMVAP-AR----------VDRVKVEGIG 45
MG+VHA+ + P S P+ LG V V P A+ V V +G+G
Sbjct: 1 MGTVHARSLEPLP----SSGPDFGGLGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLG 56
Query: 46 RTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPE 105
RT DDII I ++FK+ +++ + HE R +L RL F+QV + ID +G DA P
Sbjct: 57 RTKDDIIICEIG--DVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDDALP- 113
Query: 106 HGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYN 165
+G ++TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y
Sbjct: 114 NGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYG 173
Query: 166 LTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGL 223
L+ KP G + S +L + + P SS + ++G+ +Y+ FP K S ++W G+
Sbjct: 174 LSFFKPRPGNFERNFSVNLYKVTGQFPWSSLRETDRGMSAEYS--FPIWKTSHTVKWEGV 231
Query: 224 IREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GG 282
RE+ SR FA+R+ +G++LKSSL +D R+ ILPR G + + E AG GG
Sbjct: 232 WRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQELAGYTGG 291
Query: 283 DVGFQK 288
DV F K
Sbjct: 292 DVSFIK 297
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 91/247 (36%), Positives = 132/247 (53%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILPR G + + E
Sbjct: 225 TVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQE 284
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N L AS G+L DK ++ D
Sbjct: 285 LAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIG-DKPSSIADRFYLGGPT 343
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + IGP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 344 SIRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 402
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQF 509
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P Q D + G+QF
Sbjct: 403 CNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQF 462
Query: 510 GFGITFI 516
G GI F+
Sbjct: 463 GAGIRFL 469
>UNIPROTKB|E2QSZ0 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045040 "protein import into mitochondrial
outer membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401 CTD:25813
GeneTree:ENSGT00390000011355 EMBL:AAEX03007251 EMBL:AAEX03007252
RefSeq:XP_531702.3 Ensembl:ENSCAFT00000001384
Ensembl:ENSCAFT00000047071 GeneID:474473 KEGG:cfa:474473
NextBio:20850481 Uniprot:E2QSZ0
Length = 469
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 112/302 (37%), Positives = 163/302 (53%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGHVMVAP-AR----------VDRVKVEGIGRTYD 49
MG+VHA+ + P + D V V P A+ V V +G+GRT D
Sbjct: 1 MGTVHARSLEPLPANGPDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLGRTKD 60
Query: 50 DIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYE 109
DII I ++FK+ +++ + HE R +L RL F+QV + ID +G DA P +G +
Sbjct: 61 DIIICEIG--DVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDDALP-NGLD 117
Query: 110 ITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLR 169
+TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y L+
Sbjct: 118 VTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFF 177
Query: 170 KPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGLIREI 227
KP G + S +L + + P SS + ++G+ +Y+ FP K S ++W G+ RE+
Sbjct: 178 KPQPGNFERNFSVNLYKVTGQFPWSSLRETDRGVSAEYS--FPIWKTSHTVKWEGVWREL 235
Query: 228 QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGF 286
SR FA+R+ +G++LKSSL +D R+ ILPR G + + E AG GGDV F
Sbjct: 236 GCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQELAGYTGGDVSF 295
Query: 287 QK 288
K
Sbjct: 296 IK 297
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 90/247 (36%), Positives = 132/247 (53%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILPR G + + E
Sbjct: 225 TVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQE 284
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N L SL G+L DK ++ D
Sbjct: 285 LAGYTGGDVSFIKEDFELQLNKQLVFDSVFSTSLWGGVLVPIG-DKPSSIADRFYLGGPT 343
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + +GP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 344 SVRGFSMHSVGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 402
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQF 509
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P Q+ D G+QF
Sbjct: 403 CNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQKGDRTCDGVQF 462
Query: 510 GFGITFI 516
G GI F+
Sbjct: 463 GAGIRFL 469
>UNIPROTKB|F6UPR4 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019867 "outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
GeneTree:ENSGT00390000011355 EMBL:AAEX03007251 EMBL:AAEX03007252
Ensembl:ENSCAFT00000001384 Uniprot:F6UPR4
Length = 456
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 112/302 (37%), Positives = 163/302 (53%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGHVMVAP-AR----------VDRVKVEGIGRTYD 49
MG+VHA+ + P + D V V P A+ V V +G+GRT D
Sbjct: 1 MGTVHARSLEPLPANGPDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLGRTKD 60
Query: 50 DIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYE 109
DII I ++FK+ +++ + HE R +L RL F+QV + ID +G DA P +G +
Sbjct: 61 DIIICEIG--DVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDDALP-NGLD 117
Query: 110 ITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLR 169
+TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y L+
Sbjct: 118 VTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFF 177
Query: 170 KPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGLIREI 227
KP G + S +L + + P SS + ++G+ +Y+ FP K S ++W G+ RE+
Sbjct: 178 KPQPGNFERNFSVNLYKVTGQFPWSSLRETDRGVSAEYS--FPIWKTSHTVKWEGVWREL 235
Query: 228 QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGF 286
SR FA+R+ +G++LKSSL +D R+ ILPR G + + E AG GGDV F
Sbjct: 236 GCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQELAGYTGGDVSF 295
Query: 287 QK 288
K
Sbjct: 296 IK 297
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 84/233 (36%), Positives = 124/233 (53%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILPR G + + E
Sbjct: 225 TVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQE 284
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N L SL G+L DK ++ D
Sbjct: 285 LAGYTGGDVSFIKEDFELQLNKQLVFDSVFSTSLWGGVLVPIG-DKPSSIADRFYLGGPT 343
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + +GP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 344 SVRGFSMHSVGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 402
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDS 502
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P Q+ DS
Sbjct: 403 CNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQKGDS 455
>RGD|1303219 [details] [associations]
symbol:Samm50 "sorting and assembly machinery component 50
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0001401 "mitochondrial sorting and assembly machinery complex"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005741 "mitochondrial outer membrane" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0016021 "integral to membrane" evidence=IEA;ISO] [GO:0045040
"protein import into mitochondrial outer membrane"
evidence=IEA;ISO] InterPro:IPR000184 Pfam:PF01103 RGD:1303219
GO:GO:0016021 GO:GO:0005743 eggNOG:COG4775 GO:GO:0045040
GO:GO:0001401 CTD:25813 GeneTree:ENSGT00390000011355
HOVERGEN:HBG054614 OrthoDB:EOG4H72BD HOGENOM:HOG000015411
EMBL:BC079302 IPI:IPI00372941 RefSeq:NP_001004241.1
UniGene:Rn.12611 ProteinModelPortal:Q6AXV4 STRING:Q6AXV4
PhosphoSite:Q6AXV4 PRIDE:Q6AXV4 DNASU:300111
Ensembl:ENSRNOT00000016520 GeneID:300111 KEGG:rno:300111
InParanoid:Q6AXV4 NextBio:646352 Genevestigator:Q6AXV4
Uniprot:Q6AXV4
Length = 469
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 111/302 (36%), Positives = 160/302 (52%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGHVMVAP-AR----------VDRVKVEGIGRTYD 49
MG+VHA+ + P D V V P A+ V V +G+ RT D
Sbjct: 1 MGTVHARSLEPLPSSGTDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLERTKD 60
Query: 50 DIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYE 109
DII I E+FK+ +++ + HE R +L RL F+QV + ID G DA P +G +
Sbjct: 61 DIIICEIG--EVFKAKNLIEVMRRSHEAREKLLRLGIFRQVDVLIDTCHGEDALP-NGLD 117
Query: 110 ITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLR 169
+TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y L+
Sbjct: 118 VTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFF 177
Query: 170 KPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGLIREI 227
KP G + S +L + + P SS + ++G+ +Y+ FP K S ++W G+ RE+
Sbjct: 178 KPQPGNFEKNFSVNLYKVTGQFPWSSLRETDRGVSAEYS--FPLCKTSHTVKWEGVWREL 235
Query: 228 QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGF 286
+R FA+R+ +G++LKSSL +D R+ ILPR G + + E AG GGDV F
Sbjct: 236 GCLARTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQELAGYTGGDVSF 295
Query: 287 QK 288
K
Sbjct: 296 IK 297
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 98/270 (36%), Positives = 143/270 (52%)
Query: 254 TSLDKRDDKILPRHG-QFCQGS--VEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFI 308
+SL + D + + C+ S V++ G+ ++G + +S R ++LKSSL
Sbjct: 202 SSLRETDRGVSAEYSFPLCKTSHTVKWEGVWRELGCLARTASFAVRKESGHSLKSSLSHA 261
Query: 309 TSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAG 367
+D R+ ILPR G + + E AG GGDV F K Q+N PL SL G
Sbjct: 262 MVIDSRNSSILPRRGALLKVNQELAGYTGGDVSFIKEDFELQLNKPLVLDSVFSTSLWGG 321
Query: 368 LLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPF 427
+L DK ++ D + + IGP+S G LGG YW G H+YTPLPF
Sbjct: 322 MLVPIG-DKLSSIADRFYLGGPTSVRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPF 380
Query: 428 TKPTKGSFSDNFRLNFFANAGSIQDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLAR 486
+P +G F + FR +FF NAG++ +++ E + RKL E +R SYG G+ +R +AR
Sbjct: 381 -RPGQGGFGELFRTHFFLNAGNLCNLNYGEGPRAHIRKLAECIRWSYGAGIVLRLGNIAR 439
Query: 487 VEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
+E+NYC P QR D + G+QFG GI F+
Sbjct: 440 LELNYCIPMGVQRGDRICDGVQFGAGIRFL 469
>UNIPROTKB|G3MZZ3 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9913 "Bos taurus" [GO:0045040 "protein import into
mitochondrial outer membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=IEA] InterPro:IPR000184
Pfam:PF01103 GO:GO:0005743 GO:GO:0045040 GO:GO:0001401
GeneTree:ENSGT00390000011355 OMA:DTRNSSI EMBL:DAAA02014865
EMBL:DAAA02014866 EMBL:DAAA02014867 Ensembl:ENSBTAT00000063243
Uniprot:G3MZZ3
Length = 469
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 115/306 (37%), Positives = 163/306 (53%)
Query: 1 MGSVHAKEIPSQPYDELDSDPNDAMLGH----VMVAP-AR----------VDRVKVEGIG 45
MG+VHA+ + P S P+ LG V V P A+ V V +G+G
Sbjct: 1 MGTVHARSLEPLPA----SGPDFGALGEEAEFVEVEPEAKQEILENKDVVVQHVHFDGLG 56
Query: 46 RTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPE 105
RT DDII I+ ++FK+ +++ + HE R +L RL F+QV + ID +G DA P
Sbjct: 57 RTKDDIIMYEIR--DVFKAKNLIEVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDDALP- 113
Query: 106 HGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYN 165
+G ++TF V EL+R T +GNNEGS+V+ K+PNL GR E + YGTK Y
Sbjct: 114 NGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYG 173
Query: 166 LTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGL 223
L+ KP G D S + + P SS L Q + + + FPT K S ++W G+
Sbjct: 174 LSFFKPQPGNFDRNFSVNDHTIMEMFPWSS--LGGQSIGVSASTSFPTWKTSHTVKWEGV 231
Query: 224 IREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GG 282
RE+ SR FA+R+ +G++LKSSL +D R+ ILP+ G + + E AG GG
Sbjct: 232 WRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGALLKVNQELAGYTGG 291
Query: 283 DVGFQK 288
DV F K
Sbjct: 292 DVSFLK 297
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 91/247 (36%), Positives = 134/247 (54%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILP+ G + + E
Sbjct: 225 TVKWEGVWRELGCLSRVASFAVRKESGHSLKSSLSHSMVIDSRNSSILPKRGALLKVNQE 284
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N L ASL G+L DK ++ D
Sbjct: 285 LAGYTGGDVSFLKEDFELQLNKQLILDTVFSASLWGGMLVPMG-DKPSSIADRFYLGGPT 343
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + +GP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 344 SVRGFSMHSVGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 402
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQF 509
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P QR D + G+QF
Sbjct: 403 CNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQRGDRICDGVQF 462
Query: 510 GFGITFI 516
G GI F+
Sbjct: 463 GAGIRFL 469
>UNIPROTKB|A8MZI2 [details] [associations]
symbol:SAMM50 "Sorting and assembly machinery component 50
homolog" species:9606 "Homo sapiens" [GO:0019867 "outer membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 GO:GO:0005743
GO:GO:0019867 EMBL:AL035398 HGNC:HGNC:24276 HOVERGEN:HBG054614
ChiTaRS:SAMM50 IPI:IPI01018135 STRING:A8MZI2
Ensembl:ENST00000396202 ArrayExpress:A8MZI2 Bgee:A8MZI2
Uniprot:A8MZI2
Length = 259
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 91/247 (36%), Positives = 132/247 (53%)
Query: 274 SVEFAGLGGDVG-FQKYSSLH-RVVHRYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVE 331
+V++ G+ ++G + +S R ++LKSSL +D R+ ILPR G + + E
Sbjct: 15 TVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRGALLKVNQE 74
Query: 332 FAGL-GGDVGFQKYSSLFQVNYPLGPYITAQASLDAGLLGSFSQDKTFTLCDXXXXXXXX 390
AG GGDV F K Q+N L AS G+L DK ++ D
Sbjct: 75 LAGYTGGDVSFIKEDFELQLNKQLIFDSVFSASFWGGMLVPIG-DKPSSIADRFYLGGPT 133
Query: 391 XXXXXAHYGIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSI 450
+ + IGP+S G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++
Sbjct: 134 SIRGFSMHSIGPQSEGDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNL 192
Query: 451 QDMSASE-ITSKWRKLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQF 509
+++ E + RKL E +R SYG G+ +R +AR+E+NYC P Q D + G+QF
Sbjct: 193 CNLNYGEGPKAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQTGDRICDGVQF 252
Query: 510 GFGITFI 516
G GI F+
Sbjct: 253 GAGIRFL 259
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 211 FPTIKNS--IEWNGLIREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHG 268
FP K S ++W G+ RE+ SR FA+R+ +G++LKSSL +D R+ ILPR G
Sbjct: 7 FPIWKTSHTVKWEGVWRELGCLSRTASFAVRKESGHSLKSSLSHAMVIDSRNSSILPRRG 66
Query: 269 QFCQGSVEFAGL-GGDVGFQK 288
+ + E AG GGDV F K
Sbjct: 67 ALLKVNQELAGYTGGDVSFIK 87
>FB|FBgn0033989 [details] [associations]
symbol:CG7639 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0019867 "outer membrane"
evidence=IEA] InterPro:IPR000184 Pfam:PF01103 EMBL:AE013599
GO:GO:0016021 GO:GO:0005741 eggNOG:COG4775
GeneTree:ENSGT00390000011355 EMBL:AY071492 EMBL:AY094882
RefSeq:NP_995838.1 UniGene:Dm.19297 ProteinModelPortal:Q9V784
SMR:Q9V784 IntAct:Q9V784 STRING:Q9V784 PaxDb:Q9V784 PRIDE:Q9V784
EnsemblMetazoa:FBtr0087424 GeneID:36675 KEGG:dme:Dmel_CG7639
UCSC:CG7639-RB FlyBase:FBgn0033989 InParanoid:Q9V784 OMA:DTRNSSI
OrthoDB:EOG4Q2BXG PhylomeDB:Q9V784 GenomeRNAi:36675 NextBio:799806
Bgee:Q9V784 GermOnline:CG7639 Uniprot:Q9V784
Length = 443
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 87/268 (32%), Positives = 141/268 (52%)
Query: 34 ARVDRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIE 93
ARVDRV V G+ RT++D + + +FK+S F L+ + ++ L L F+ V +
Sbjct: 23 ARVDRVNVSGLLRTHNDYVMRAADG--LFKASNFQDLMLEAMSTKSYLHELGIFKDVSVH 80
Query: 94 IDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGELAEM 153
ID S+G DA+P+ GYE+TF+ E+ R T IG NEGS+ +PN+ GRGE +
Sbjct: 81 IDVSRGADASPQ-GYEVTFKGNEMSRMMGSAGTEIGQNEGSLRTELTIPNILGRGENISL 139
Query: 154 SYVYG-TKSLVYNLTLRKPFFGPIDSM----LSGSLLRQVNEMPASSCKLLEQGLILDYA 208
Y T++ L KPFF +S S+ RQ + SS + G ++D++
Sbjct: 140 QGSYSSTRANDLQLKFWKPFFHTRFKENRPEMSFSIFRQTDRFDISSFQTTNIGYLVDFS 199
Query: 209 ---ILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILP 265
++ + +S+++ IR++ ++ PFAIR+ G L S L++ D RD + P
Sbjct: 200 AHTMVGVDLTHSLQYENAIRDVGLLNKSVPFAIRDHCGPKLASLLRYSVVYDNRDGNVFP 259
Query: 266 RHGQFCQGSVEFAGLGGDVGFQKYSSLH 293
G + + E+ GLGG+V + S+ H
Sbjct: 260 TRGIYLKSVNEYCGLGGNVAYTS-STAH 286
Score = 258 (95.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 60/216 (27%), Positives = 99/216 (45%)
Query: 301 LKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLFQVNYPLGPYITA 360
L S L++ D RD + P G + + E+ GLGG+V + ++ ++N PL + A
Sbjct: 240 LASLLRYSVVYDNRDGNVFPTRGIYLKSVNEYCGLGGNVAYTSSTAHGELNVPLFAGLVA 299
Query: 361 QASLDAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQGAYH 420
Q G++ + G GP + +G +W H
Sbjct: 300 QFCARVGVVKETKNTTQLPISSLFYCGGPLTLRGFKFGGAGPVVESTPIGAQSFWCTGAH 359
Query: 421 IYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYGIGLAIR 480
++ PLPF K + + +FR++FF N G+ S E +R ++G+GLA++
Sbjct: 360 LWAPLPFAGVFK-NLASHFRMHFFYNIGNNNSFST-----------ENMRSAFGMGLAVK 407
Query: 481 FAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
A AR+E+NYC P +Q D ++ G QFG G F+
Sbjct: 408 LAERARIELNYCVPVRHQDTDRILNGFQFGIGYEFV 443
>UNIPROTKB|I3LLW3 [details] [associations]
symbol:SAMM50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0001401 "mitochondrial sorting and assembly
machinery complex" evidence=IEA] InterPro:IPR000184 Pfam:PF01103
GO:GO:0005743 GO:GO:0045040 GO:GO:0001401
GeneTree:ENSGT00390000011355 OMA:DASFVKN Ensembl:ENSSSCT00000027711
Uniprot:I3LLW3
Length = 356
Score = 323 (118.8 bits), Expect = 8.5e-29, P = 8.5e-29
Identities = 81/230 (35%), Positives = 119/230 (51%)
Query: 62 FKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYEITFRVKELKRYR 121
FK +++ + HE R +L RL F+QV + ID +G DA P +G ++TF V EL+R
Sbjct: 66 FKEKNSKKVMRKSHEAREKLLRLGIFRQVDVLIDTCQGDDALP-NGLDVTFEVMELRRLT 124
Query: 122 AGVTTSIGNNEGSVVVWGKMPNLYGRGELAEMSYVYGTKSLVYNLTLRKPFFGPIDSMLS 181
T +GNNEGS+V+ K+PNL GR E + YGTK Y L+ KP G + S
Sbjct: 125 GSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQPGNFERNFS 184
Query: 182 GSLLRQVNEMPASSCKLLEQGLILDYAILFPTIKNS--IEWNGLIREIQPASRGTPFAIR 239
+L + + P SS + ++G+ +Y FP ++S ++W G + A P+ R
Sbjct: 185 VNLYKVTGQFPWSSLRETDRGVSAEYC--FPVWRSSHTVKWTGCGGGLDAA----PWPGR 238
Query: 240 ESAGYTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGL-GGDVGFQK 288
+L + LD R+ ILPR G + + E AG GGDV F K
Sbjct: 239 VLGAQSLLQPREHAMVLDSRNSSILPRRGALLKVNQELAGYTGGDVSFIK 288
>WB|WBGene00001662 [details] [associations]
symbol:gop-3 species:6239 "Caenorhabditis elegans"
[GO:0019867 "outer membrane" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0016021 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005741 GO:GO:0000003 EMBL:FO080774 eggNOG:COG4775
EMBL:AY052771 PIR:T15758 RefSeq:NP_498119.1 UniGene:Cel.19335
ProteinModelPortal:P46576 STRING:P46576 PaxDb:P46576
EnsemblMetazoa:C34E10.1.1 EnsemblMetazoa:C34E10.1.2
EnsemblMetazoa:C34E10.1.3 GeneID:175723 KEGG:cel:CELE_C34E10.1
UCSC:C34E10.1.2 CTD:175723 WormBase:C34E10.1
GeneTree:ENSGT00390000011355 HOGENOM:HOG000154249 InParanoid:P46576
OMA:DASFVKN NextBio:889368 Uniprot:P46576
Length = 434
Score = 265 (98.3 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 74/261 (28%), Positives = 126/261 (48%)
Query: 33 PARVDRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQI 92
P+ V+ V+ G+ T +D + + +E+++S +L+ H L+ +
Sbjct: 20 PSIVEAVQFHGVRITKNDALVKEV--SELYRSKNLDELVHNSHLAARHLQEVGLMDNAVA 77
Query: 93 EIDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNN-EGSVVVWGKMPNLYGRGELA 151
ID S P + GY + F V+E K + AGV + N + V + ++ GRGE
Sbjct: 78 LIDTS--PSSN--EGYVVNFLVREPKSFTAGVKAGVSTNGDADVSLNAGKQSVGGRGEAI 133
Query: 152 EMSYVYGTKS-LVYNLTLRKPFFG-PIDSMLSGSLLRQVNEMPASSCKLLEQGLILDY-- 207
Y Y K +N++ KPF G S +S +L R + MP + + E +L Y
Sbjct: 134 NTQYTYTVKGDHCFNISAIKPFLGWQKYSNVSATLYRSLAHMPWNQSDVDENAAVLAYNG 193
Query: 208 AILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRH 267
+ + + ++ N + R ++ A+R F++RE AG+TLK SL+ ++D RD IL
Sbjct: 194 QLWNQKLLHQVKLNAIWRTLR-ATRDAAFSVREQAGHTLKFSLENAVAVDTRDRPILASR 252
Query: 268 GQFCQGSVEFAGLGGDVGFQK 288
G + + E+AG+ GD F K
Sbjct: 253 GILARFAQEYAGVFGDASFVK 273
Score = 206 (77.6 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 64/218 (29%), Positives = 96/218 (44%)
Query: 299 YTLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLFQVNYPLGPYI 358
+TLK SL+ ++D RD IL G + + E+AG+ GD F K + Q PL
Sbjct: 229 HTLKFSLENAVAVDTRDRPILASRGILARFAQEYAGVFGDASFVKNTLDLQAAAPLPLGF 288
Query: 359 TAQASLDAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQGA 418
AS A L D+ + D IG K+ S LGG G
Sbjct: 289 ILAASFQAKHLKGLG-DREVHILDRCYLGGQQDVRGFGLNTIGVKADNSCLGGGASLAGV 347
Query: 419 YHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYGIGLA 478
H+Y PL P F+ + F +GS+ + + + ++L + R+S G GLA
Sbjct: 348 VHLYRPLI---PPNMLFA-----HAFLASGSVASVHSKNLV---QQLQDTQRVSAGFGLA 396
Query: 479 IRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
F + R+E+NY +P Y DS++ G G G+ F+
Sbjct: 397 FVFKSIFRLELNYTYPLKYVLGDSLLGGFHIGAGVNFL 434
Score = 42 (19.8 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 198 LLEQGLILDYAILFPTIKNSIEW---NGLIREIQPASRGTPFAIRES--AGYTLKSSLKF 252
L E GL+ + L T +S E N L+RE + + G + + A +L + +
Sbjct: 66 LQEVGLMDNAVALIDTSPSSNEGYVVNFLVREPKSFTAGVKAGVSTNGDADVSLNAGKQ- 124
Query: 253 ITSLDKRDDKILPRHGQFCQGSVEF--AGLGGDVGFQKYSSLHRVVHR 298
S+ R + I ++ +G F + + +G+QKYS++ ++R
Sbjct: 125 --SVGGRGEAINTQYTYTVKGDHCFNISAIKPFLGWQKYSNVSATLYR 170
Score = 39 (18.8 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 7 KEIPSQPYDELDSDPNDAMLGH--VMVAPARVDRVKVEGIGRT 47
+ + P+++ D D N A+L + + + +VK+ I RT
Sbjct: 170 RSLAHMPWNQSDVDENAAVLAYNGQLWNQKLLHQVKLNAIWRT 212
>UNIPROTKB|G4N9M6 [details] [associations]
symbol:MGG_09978 "Sorting assembly machinery 50 kDa
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
EMBL:CM001234 RefSeq:XP_003717533.1 ProteinModelPortal:G4N9M6
EnsemblFungi:MGG_09978T0 GeneID:2680964 KEGG:mgr:MGG_09978
Uniprot:G4N9M6
Length = 518
Score = 185 (70.2 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 69/277 (24%), Positives = 126/277 (45%)
Query: 24 AMLGHVMVAPARVDRVKVEG---IGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQ 80
A++ M PA V+ + + G + R + D I + E ++T G ++ + V +
Sbjct: 45 ALIQQQMSRPATVNAINIHGANNLRRGFLDPIVKPLVDDENNAATTLGDVLGRLETVTTK 104
Query: 81 LERLQCFQQVQIEIDASKGPDATPEHGY---EITFRVKELKRYRAGVTTSIGNNEGSVVV 137
L R F++ + EI S ++ P I +V E R T +G+ EGS
Sbjct: 105 LARFDLFKK-EPEIWLSSAGESDPLAAVTDLNIDIKVTERGRLMLKTGTDLGDTEGSAYG 163
Query: 138 WGKMPNLYGRGELAEMSYVYGTKSL-VYNLTLRKPFFGPIDSMLSGSLLRQVNEMPASSC 196
+ N++G E ++ GT++ Y+ P D S L E P +S
Sbjct: 164 NLLLRNVFGGAETLSLNASAGTRTRSAYSAVFATPINSNPDYRFSLEALTSATEKPWASH 223
Query: 197 KLLEQGLILDYAILFPT-IKNSIEWNGLIREIQP-ASRGTPFAIRESAGYTLKSSLKFIT 254
+ + + A++ + +S R++ A++ +P ++R AG ++K+SL+ I
Sbjct: 224 EEVTKSATARLALVSASGDTHSFAAGEAWRQVTGLAAKASP-SVRTDAGDSVKTSLQHIF 282
Query: 255 SLDKRDDKILPRHGQFCQGSVEFAG---LGGDVGFQK 288
+ D+RD+ ++P+ G + + E AG LGGDV F K
Sbjct: 283 TRDRRDNPLMPQSGYLLRTTSELAGWGPLGGDVSFSK 319
Score = 117 (46.2 bits), Expect = 8.8e-19, Sum P(2) = 8.8e-19
Identities = 37/134 (27%), Positives = 61/134 (45%)
Query: 399 GIGPKSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAG---SIQDMSA 455
G+GP+ G ++GG VY ++ P+P P RL FAN G ++D S
Sbjct: 390 GLGPRDGADAVGGDVYAAAGVNMLLPVPKAGP-----DSPLRLQLFANGGRMVGLKDRSE 444
Query: 456 SEITSKWRK--LGEELRISYG---IGLAIRFAGL--------ARVEINYCFPYSYQRDDS 502
++ TS + ++ ++G GL AG+ AR E+N+ P + +
Sbjct: 445 NKSTSGMEAGAVFRGMKSAFGDLITGLPSMSAGVGLVYAHPVARFELNFSLPLVMRMGEE 504
Query: 503 VVPGMQFGFGITFI 516
G+QFG G+ F+
Sbjct: 505 SRKGLQFGVGVNFL 518
Score = 88 (36.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 300 TLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAG---LGGDVGFQK 343
++K+SL+ I + D+RD+ ++P+ G + + E AG LGGDV F K
Sbjct: 273 SVKTSLQHIFTRDRRDNPLMPQSGYLLRTTSELAGWGPLGGDVSFSK 319
>UNIPROTKB|I3LQ32 [details] [associations]
symbol:CGI-51 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019867 "outer membrane" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 GO:GO:0019867
GeneTree:ENSGT00390000011355 Ensembl:ENSSSCT00000024039
Uniprot:I3LQ32
Length = 98
Score = 230 (86.0 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 44/97 (45%), Positives = 61/97 (62%)
Query: 406 GSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASE-ITSKWRK 464
G LGG YW G H+YTPLPF +P +G F + FR +FF NAG++ +++ E + RK
Sbjct: 2 GDYLGGEAYWAGGLHLYTPLPF-RPGQGGFGELFRTHFFLNAGNLCNLNYGEGPKAHIRK 60
Query: 465 LGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDD 501
L E +R SYG G+ +R +AR+E+NYC P Q D
Sbjct: 61 LAECIRWSYGAGIVLRLGNIARLELNYCIPMGVQGGD 97
>POMBASE|SPAC17C9.06 [details] [associations]
symbol:sam50 "mitochondrial sorting and assembly
machinery complex subunit Sam50 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043623 "cellular protein complex assembly" evidence=ISO]
[GO:0045040 "protein import into mitochondrial outer membrane"
evidence=ISO] InterPro:IPR000184 Pfam:PF01103 PomBase:SPAC17C9.06
GO:GO:0016021 EMBL:CU329670 GO:GO:0043623 eggNOG:COG4775
GO:GO:0045040 GO:GO:0001401 OMA:DTRNSSI PIR:T11586
RefSeq:NP_594600.1 ProteinModelPortal:Q10478 STRING:Q10478
EnsemblFungi:SPAC17C9.06.1 GeneID:2542441 KEGG:spo:SPAC17C9.06
HOGENOM:HOG000170308 OrthoDB:EOG45XC52 NextBio:20803498
Uniprot:Q10478
Length = 475
Score = 243 (90.6 bits), Expect = 9.9e-18, P = 9.9e-18
Identities = 71/222 (31%), Positives = 103/222 (46%)
Query: 300 TLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLG---GDVGFQKYSSLFQVNYPLGP 356
+LK SL + + D RD ++P G + + ++E AG G GD F K Q L
Sbjct: 261 SLKQSLSYTYTRDTRDHLMIPTKGDYVRQTLELAGFGFLPGDASFLKSEFWGQKAVALNS 320
Query: 357 YITAQASLDA--GLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVY 414
+ SL A G L S ++ K +LCD + IGPK G SLGGT Y
Sbjct: 321 SRSVSLSLSARIGALHSLNK-KQVSLCDRFMLGGSTSLRGFSEDRIGPKDGRDSLGGTAY 379
Query: 415 WQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYG 474
+ + PLP K S FRL FANAG + ++++ ++ + + IS G
Sbjct: 380 MAFSMSLLFPLP-----KVDASKPFRLQLFANAGGLSNLTSPNPCGTYKSILSKPCISTG 434
Query: 475 IGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
+GL + AR E+N+ P + D G+QFG GI F+
Sbjct: 435 LGL-VYATPAARFELNFTLPIATTEKDIGRKGLQFGAGIDFM 475
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 68/269 (25%), Positives = 118/269 (43%)
Query: 33 PARVDRVKVEGIGRTYDDIITDSIKQ----TEIFKSSTFGQLIFQCHEVRNQLERLQCFQ 88
P + ++V G T I +K ++ KS + + + E L ++
Sbjct: 43 PVGISSIRVTGAHHTRPSFIRKVLKTCLDTSKPAKSRSLLETLNAIQETTGNLMAFNVYE 102
Query: 89 QVQIEIDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRG 148
I+ID + + + ++T +VKE R T +GN EG+V N++G
Sbjct: 103 TANIKIDRASS-SVSGDDDLDVTIQVKEKPRLYVETGTDVGNVEGNVHANVLARNVFGGA 161
Query: 149 ELAEMSYVYGTKSL-VYNLTLRKPFFGPIDSML--SG-SLLRQVNEMPASSCKLLEQG-- 202
EL + YGT++ ++ P + L +G S LR + SS LL +G
Sbjct: 162 ELLSGNVSYGTRNRSTMSVNFETPVNADPKTRLRFNGHSNLRDNKSI--SSHDLLTKGIT 219
Query: 203 LILDYAILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDK 262
L L + L+ ++ + N L R++ + ++R AG +LK SL + + D RD
Sbjct: 220 LSLQHQDLWSG-EHLLSQNLLWRQVTHLTEYASPSVRLEAGDSLKQSLSYTYTRDTRDHL 278
Query: 263 ILPRHGQFCQGSVEFAGLG---GDVGFQK 288
++P G + + ++E AG G GD F K
Sbjct: 279 MIPTKGDYVRQTLELAGFGFLPGDASFLK 307
>TAIR|locus:2074618 [details] [associations]
symbol:AT3G11070 "AT3G11070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0031307 "integral to mitochondrial outer membrane"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0031307 EMBL:AC009991
EMBL:AC073395 eggNOG:COG4775 ProtClustDB:CLSN2684056 EMBL:AY099576
EMBL:BT002158 IPI:IPI00540026 RefSeq:NP_187718.1 UniGene:At.39812
ProteinModelPortal:Q9SRL6 IntAct:Q9SRL6 PaxDb:Q9SRL6 PRIDE:Q9SRL6
EnsemblPlants:AT3G11070.1 GeneID:820278 KEGG:ath:AT3G11070
TAIR:At3g11070 HOGENOM:HOG000241488 InParanoid:Q9SRL6 OMA:CIADRFF
PhylomeDB:Q9SRL6 Genevestigator:Q9SRL6 Uniprot:Q9SRL6
Length = 520
Score = 159 (61.0 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 66/257 (25%), Positives = 107/257 (41%)
Query: 33 PARVDRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQI 92
P RV V + G +T D II + +++T +L+ + L L F V I
Sbjct: 76 PVRVHDVIIGGNEKTKDHIIEAEVDAVR--EATTLQELLEASRVANSNLRALDIFDSVNI 133
Query: 93 EIDASKGPDATPEHGYEITFRVKELKRY---RAGVTTSIGNNEGSVVVWGKMPNLYGRGE 149
+D+ GP P + V E K + G T SV K N++G G+
Sbjct: 134 TLDS--GPPELPGTT-NVVIDVVESKSPLTGQIGAYTRAEARSSSVEASLKYKNIFGYGD 190
Query: 150 LAEMSYVYGT-KSLVYNLTLRKPFFGPIDSMLSGSLLRQVNE-MPASSCKLLEQGLILD- 206
+ + S VYG S L + P F + + + L + + SS K GL L
Sbjct: 191 IWDGSIVYGCDNSAEVGLGMYLPRFRGLSTPFTSRLFLSTQDWLKFSSYKERSLGLSLGL 250
Query: 207 YAILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPR 266
++ + + +I W LI Q A+ +IR G++L S+LK+ D+R+ + P
Sbjct: 251 FSSKYHELIYTIAWRNLIDPSQAAA----VSIRRQLGHSLLSALKYTFRFDQRNSSLRPT 306
Query: 267 HGQFCQGSVEFAGLGGD 283
+G + + GL D
Sbjct: 307 NGYAFISTSQIGGLAPD 323
Score = 89 (36.4 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 33/117 (28%), Positives = 47/117 (40%)
Query: 399 GIGP---KSGGSSLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSA 455
G+GP K G S V A + L F P + + FA AG++ +S
Sbjct: 401 GVGPSEPKRKGDSERDFVGGDAAVTAFADLSFDLPVRWLRERGIHGHVFACAGNMAKLSE 460
Query: 456 SEITSKWR-KLGEELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGF 511
+E + K E R S G G+ + L R+E+NYC Q D G+ F
Sbjct: 461 NEFRNFTAPKFLETFRTSVGAGIVLP-TSLFRMELNYCHILKKQEHDQARSGVFLTF 516
>SGD|S000004971 [details] [associations]
symbol:SAM50 "Essential component of the SAM/TOB complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005741 "mitochondrial
outer membrane" evidence=IEA;IDA] [GO:0015266 "protein channel
activity" evidence=IDA] [GO:0031307 "integral to mitochondrial
outer membrane" evidence=IDA] [GO:0045040 "protein import into
mitochondrial outer membrane" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006461 "protein complex
assembly" evidence=IMP;IPI] [GO:0001401 "mitochondrial sorting and
assembly machinery complex" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0019867 "outer membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
Reactome:REACT_85873 InterPro:IPR000184 Pfam:PF01103 SGD:S000004971
GO:GO:0006461 EMBL:BK006947 GO:GO:0031307 Reactome:REACT_118590
eggNOG:COG4775 GO:GO:0045040 GO:GO:0015266 GO:GO:0001401
TCDB:1.B.33.3.1 GeneTree:ENSGT00390000011355 HOGENOM:HOG000170308
OrthoDB:EOG45XC52 EMBL:Z71302 PIR:S62938 RefSeq:NP_014372.1
ProteinModelPortal:P53969 IntAct:P53969 STRING:P53969 PaxDb:P53969
PeptideAtlas:P53969 EnsemblFungi:YNL026W GeneID:855705
KEGG:sce:YNL026W CYGD:YNL026w NextBio:980043 ArrayExpress:P53969
Genevestigator:P53969 GermOnline:YNL026W Uniprot:P53969
Length = 484
Score = 191 (72.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 56/218 (25%), Positives = 101/218 (46%)
Query: 301 LKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLFQVNYPLGPYITA 360
L++ L LDKRD + P G + S E + G + Q + + ++ +IT
Sbjct: 274 LRTILGHTFVLDKRDHIMCPTKGSMLKWSNELSP-GKHLKTQLELNSVK-SWMNDDFITF 331
Query: 361 QASLDAGLLGSFSQDKTFT--LCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGTVYWQGA 418
++ G L + S ++ +CD +G+GP+ ++GG +
Sbjct: 332 STTIKTGYLKNLSSQQSLPVHICDKFQSGGPSDIRGFQTFGLGPRDLYDAVGGDAFVSYG 391
Query: 419 YHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYGIGLA 478
+++ LP+ K K NFRL++F N G + + + + + +L +E S GIGL
Sbjct: 392 LSVFSRLPWKKVEKS----NFRLHWFFNGGKLVNHDNTSLGNCIGQLSKEHSTSTGIGLV 447
Query: 479 IRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
+R +AR E+N+ P + +D + G QFG G+ F+
Sbjct: 448 LRHP-MARFELNFTLPITAHENDLIRKGFQFGLGLAFL 484
Score = 47 (21.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 39 VKVEGIGRTYDDIITDSIKQT----EIFKSSTFGQLI 71
++V G+ T D I S+ Q I KS T GQL+
Sbjct: 29 IRVAGVVTTGTDHIDPSVLQAYLDDTIMKSITLGQLV 65
>CGD|CAL0004681 [details] [associations]
symbol:SAM50 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0031307 "integral to
mitochondrial outer membrane" evidence=IEA] [GO:0001401
"mitochondrial sorting and assembly machinery complex"
evidence=IEA] [GO:0045040 "protein import into mitochondrial outer
membrane" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0015266 "protein channel activity" evidence=IEA]
InterPro:IPR000184 Pfam:PF01103 CGD:CAL0004681 GO:GO:0005886
EMBL:AACQ01000066 GO:GO:0019867 eggNOG:COG4775 RefSeq:XP_716599.1
ProteinModelPortal:Q5A4H6 STRING:Q5A4H6 GeneID:3641721
KEGG:cal:CaO19.7358 Uniprot:Q5A4H6
Length = 507
Score = 191 (72.3 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 65/226 (28%), Positives = 104/226 (46%)
Query: 302 KSSLKFITSLDKRDDKILPRHGQFCQ-G------SVEFAGLGGDVGFQKYSSLFQVNYPL 354
KSS+ + + D RD+K LP G+F Q G S+ F L F K + Q +
Sbjct: 287 KSSISYNLNYDTRDNKHLPTKGKFFQIGLEYNDPSILFFKLKNQYPFIKTVTQSQFIHRF 346
Query: 355 GPYITAQASLDA--GLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGT 412
P+I + + GLL ++DK +L D G+GPK S +GG
Sbjct: 347 -PFINSNLIITNKFGLLYPLTKDKNSSLLDRFYIGGPNDVRSFLLNGLGPKDYNSCIGGD 405
Query: 413 VYWQGAYHIYTPLPFTKPTKGSFS-DNFRLNFFANAGSIQDMSA-SEITSKWRKLGEELR 470
++ G + T +P K + +F NF +NF G +D+S + + + L +
Sbjct: 406 LFLNGGISLITDIP--KYNESNFKIHNF-INFGRLVGFNKDISLFNNLQNLNLTLTSQYS 462
Query: 471 ISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
ISYG G+ +AR E+N+ P DS+ G+Q+G G++F+
Sbjct: 463 ISYGFGILFNHP-MARFELNFVLPLVTHERDSLRKGIQYGIGVSFL 507
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 62/292 (21%), Positives = 114/292 (39%)
Query: 33 PARVDRVKVEGIGRTY-DDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQ 91
P ++ V++ G+ Y D+ + + + + G + +++ L +Q
Sbjct: 67 PIKIRNVQITN-GQLYRDEFLKYQFRNLLNGEIMSLGNYVKNVNQISKDLINSGIIDNLQ 125
Query: 92 IEIDASKGPDATPEHGYEIT--FRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGE 149
+ + P + Y + F + KR+ A T+IGN EG + + NL+G GE
Sbjct: 126 VVNNLVNPPMFSKSQAYHVVPVFNIVPSKRFFAKTGTNIGNGEGDGYIQFQFKNLFGGGE 185
Query: 150 LAEMSYVYGTKSLV-YNLTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYA 208
+ GTK+ Y L +P + M LL + + +G+I
Sbjct: 186 NLIFDAITGTKTKSSYLLNYNQPIGNNLQYMNENLLLINTRNLDWLQSNVTTRGMINKLY 245
Query: 209 ILFPTIKNSIEWNGLIR---EIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILP 265
F + ++ +I + + +G KSS+ + + D RD+K LP
Sbjct: 246 TRFHGDITCLNHEIILENSWKILNNHSSKSMQVLQQSGSQFKSSISYNLNYDTRDNKHLP 305
Query: 266 RHGQFCQ-G------SVEFAGLGGDVGFQKYSSLHRVVHRYTLKSSLKFITS 310
G+F Q G S+ F L F K + + +HR+ +S IT+
Sbjct: 306 TKGKFFQIGLEYNDPSILFFKLKNQYPFIKTVTQSQFIHRFPFINSNLIITN 357
>UNIPROTKB|Q5A4H6 [details] [associations]
symbol:CaO19.7358 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000184 Pfam:PF01103
CGD:CAL0004681 GO:GO:0005886 EMBL:AACQ01000066 GO:GO:0019867
eggNOG:COG4775 RefSeq:XP_716599.1 ProteinModelPortal:Q5A4H6
STRING:Q5A4H6 GeneID:3641721 KEGG:cal:CaO19.7358 Uniprot:Q5A4H6
Length = 507
Score = 191 (72.3 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 65/226 (28%), Positives = 104/226 (46%)
Query: 302 KSSLKFITSLDKRDDKILPRHGQFCQ-G------SVEFAGLGGDVGFQKYSSLFQVNYPL 354
KSS+ + + D RD+K LP G+F Q G S+ F L F K + Q +
Sbjct: 287 KSSISYNLNYDTRDNKHLPTKGKFFQIGLEYNDPSILFFKLKNQYPFIKTVTQSQFIHRF 346
Query: 355 GPYITAQASLDA--GLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKSGGSSLGGT 412
P+I + + GLL ++DK +L D G+GPK S +GG
Sbjct: 347 -PFINSNLIITNKFGLLYPLTKDKNSSLLDRFYIGGPNDVRSFLLNGLGPKDYNSCIGGD 405
Query: 413 VYWQGAYHIYTPLPFTKPTKGSFS-DNFRLNFFANAGSIQDMSA-SEITSKWRKLGEELR 470
++ G + T +P K + +F NF +NF G +D+S + + + L +
Sbjct: 406 LFLNGGISLITDIP--KYNESNFKIHNF-INFGRLVGFNKDISLFNNLQNLNLTLTSQYS 462
Query: 471 ISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITFI 516
ISYG G+ +AR E+N+ P DS+ G+Q+G G++F+
Sbjct: 463 ISYGFGILFNHP-MARFELNFVLPLVTHERDSLRKGIQYGIGVSFL 507
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 62/292 (21%), Positives = 114/292 (39%)
Query: 33 PARVDRVKVEGIGRTY-DDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQ 91
P ++ V++ G+ Y D+ + + + + G + +++ L +Q
Sbjct: 67 PIKIRNVQITN-GQLYRDEFLKYQFRNLLNGEIMSLGNYVKNVNQISKDLINSGIIDNLQ 125
Query: 92 IEIDASKGPDATPEHGYEIT--FRVKELKRYRAGVTTSIGNNEGSVVVWGKMPNLYGRGE 149
+ + P + Y + F + KR+ A T+IGN EG + + NL+G GE
Sbjct: 126 VVNNLVNPPMFSKSQAYHVVPVFNIVPSKRFFAKTGTNIGNGEGDGYIQFQFKNLFGGGE 185
Query: 150 LAEMSYVYGTKSLV-YNLTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYA 208
+ GTK+ Y L +P + M LL + + +G+I
Sbjct: 186 NLIFDAITGTKTKSSYLLNYNQPIGNNLQYMNENLLLINTRNLDWLQSNVTTRGMINKLY 245
Query: 209 ILFPTIKNSIEWNGLIR---EIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILP 265
F + ++ +I + + +G KSS+ + + D RD+K LP
Sbjct: 246 TRFHGDITCLNHEIILENSWKILNNHSSKSMQVLQQSGSQFKSSISYNLNYDTRDNKHLP 305
Query: 266 RHGQFCQ-G------SVEFAGLGGDVGFQKYSSLHRVVHRYTLKSSLKFITS 310
G+F Q G S+ F L F K + + +HR+ +S IT+
Sbjct: 306 TKGKFFQIGLEYNDPSILFFKLKNQYPFIKTVTQSQFIHRFPFINSNLIITN 357
>TAIR|locus:2169702 [details] [associations]
symbol:AT5G05520 "AT5G05520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0043090 "amino acid
import" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244
GO:GO:0005739 EMBL:CP002688 GO:GO:0009536 EMBL:AB005241
GO:GO:0019867 OMA:RNSAIFP EMBL:AY059801 EMBL:AY093246
IPI:IPI00524138 RefSeq:NP_568157.1 UniGene:At.24120
ProteinModelPortal:Q9FFG3 SMR:Q9FFG3 PRIDE:Q9FFG3
EnsemblPlants:AT5G05520.1 GeneID:830435 KEGG:ath:AT5G05520
TAIR:At5g05520 InParanoid:Q9FFG3 PhylomeDB:Q9FFG3
ProtClustDB:CLSN2684056 Genevestigator:Q9FFG3 Uniprot:Q9FFG3
Length = 524
Score = 152 (58.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 71/256 (27%), Positives = 109/256 (42%)
Query: 35 RVDRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRN-QLERLQCFQQVQIE 93
RV V V+G +T D +I + ++ + +T Q + + +V N L+ L F V+I
Sbjct: 75 RVHDVIVKGNEKTKDHVIEAEV---DVVRQATTLQELLKASKVANFNLQALDIFDSVKIT 131
Query: 94 IDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNNEG-SVVVWG--KMPNLYGRGEL 150
+D+ GP P + V E K G + E S + G K N++G G++
Sbjct: 132 LDS--GPPELPGTT-NVVIDVVESKSPITGQIGTFTKAEARSSSLEGSLKYKNIFGYGDI 188
Query: 151 AEMSYVYGTK-SLVYNLTLRKPFF-GPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDY- 207
+ S YG S L + P F G S L + + SS K GL L
Sbjct: 189 WDGSLAYGCDHSAEVGLGMYLPRFRGRPTPFTSRVYLSTQDWLKFSSYKERALGLSLGLI 248
Query: 208 AILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRH 267
A + + +I W LI Q ASR +IR G+ L S+LK+ D+R+ + P
Sbjct: 249 ASKYHELAYNIAWRNLIDPSQMASR----SIRRQLGHNLVSALKYTFKFDQRNSSLRPTR 304
Query: 268 GQFCQGSVEFAGLGGD 283
G + + GL D
Sbjct: 305 GYSFISTSQIGGLAPD 320
Score = 81 (33.6 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 409 LGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWR-KLGE 467
+GG V A + L F P K + FA AG++ ++S ++ + KL E
Sbjct: 422 VGGDV----AVTAFADLSFDFPLKWFRDRGIHGHVFACAGNMAELSENKYRNFTAPKLLE 477
Query: 468 ELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITF 515
R S G G+ + L R+E+NYC Q D + GF +TF
Sbjct: 478 TFRSSVGAGIVVP-TSLFRMELNYCHILKKQEHDRA----KSGFFMTF 520
>ASPGD|ASPL0000065328 [details] [associations]
symbol:AN10873 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019867 "outer membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000184 Pfam:PF01103 EMBL:BN001304 GO:GO:0019867
EnsemblFungi:CADANIAT00000489 OMA:RNSAIFP Uniprot:C8VCB1
Length = 516
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 67/241 (27%), Positives = 104/241 (43%)
Query: 300 TLKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLG---GDVGFQKYSSLFQVNYPLG- 355
++KSS+ + D+RD+ LP G + + E AG G GDV F K Q P+
Sbjct: 277 SVKSSVFHSWTTDRRDNPFLPSRGYYAKAFNELAGWGPLKGDVAFWKSEIETQSAIPIPI 336
Query: 356 PYITAQASLD------AGLLGSFSQD-----KTFTLCDXXXXXXXXXXXXXAHYGIGPKS 404
P + + + AGLL S D + L D G+GP+
Sbjct: 337 PGVKGDSGVSFTTGFRAGLLYPLSLDSDSRPRLSRLNDRFQLGGPTDVRGFRLSGLGPRD 396
Query: 405 GGSSLGGTVYWQGAYHIYTPLPFT---KPTK-GSFSDNFRLNFFANAGSIQDMSASEITS 460
G ++GG VY G+ ++ P+P KP + +F + RL NA S+SE+
Sbjct: 397 GTDAVGGDVYAAGSANLLFPVPRVGAEKPLRLQAFVNGGRLLPLRNAQKAAPSSSSEVKD 456
Query: 461 KWR----KLGEEL-RISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITF 515
+ ++G L I+ G+GL AR E+N P ++ + G+Q G GI F
Sbjct: 457 AMKFTLSEIGNGLPSIAAGVGLVYAHPA-ARFELNISLPLVLRKGEEGRKGLQLGIGINF 515
Query: 516 I 516
+
Sbjct: 516 L 516
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 60/220 (27%), Positives = 99/220 (45%)
Query: 79 NQLERLQCFQQ-VQIEIDASKGPDA-TPEHGYEITFRVKELKRYRAGVTTSIGNNEGSVV 136
++L R FQQ V + +D + + T + + VKE R T +GN EGS
Sbjct: 107 DKLNRFDIFQQPVSVYLDQTPASETQTGLTNISVYYSVKEKSRVLLKTGTDLGNAEGSA- 165
Query: 137 VWGKM--PNLYGRGELAEMSYVYGTKSL-VYNLTLRKPFFGPIDSMLS-GSLLRQVNEMP 192
+G + N++G E + GT++ Y P F D L G + +
Sbjct: 166 -YGNLLWRNVFGGAENLNFNASLGTRTRSAYQAAFDTPIFSDPDFRLELGGIASSTQKTW 224
Query: 193 ASSCKLLEQGLILDYAILFPTIKNSIEWNGLIREIQP-ASRGTPFAIRESAGYTLKSSLK 251
AS ++L+ G + ++ I ++G R++ A +P +R +AG ++KSS+
Sbjct: 225 ASHEEVLKGGWSKLRWLSRSGQRHEIGYSGFWRQVTGLADNASP-TVRANAGDSVKSSVF 283
Query: 252 FITSLDKRDDKILPRHGQFCQGSVEFAGLG---GDVGFQK 288
+ D+RD+ LP G + + E AG G GDV F K
Sbjct: 284 HSWTTDRRDNPFLPSRGYYAKAFNELAGWGPLKGDVAFWK 323
>UNIPROTKB|Q48LL0 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01430 InterPro:IPR000184
InterPro:IPR010827 Pfam:PF01103 Pfam:PF07244 GO:GO:0016021
GO:GO:0005886 GO:GO:0009279 EMBL:CP000058 GenomeReviews:CP000058_GR
GO:GO:0051205 eggNOG:COG4775 KO:K07277 GO:GO:0043165
InterPro:IPR023707 PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 OMA:GVTWYSP
RefSeq:YP_273714.1 ProteinModelPortal:Q48LL0 STRING:Q48LL0
GeneID:3557991 KEGG:psp:PSPPH_1459 PATRIC:19972061
HOGENOM:HOG000261767 ProtClustDB:CLSK868128 Uniprot:Q48LL0
Length = 790
Score = 118 (46.6 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 30 MVAPAR---VDRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQC 86
MV P + +R+ G +T D+++ ++Q E +ST+ LI Q +VR LERL
Sbjct: 340 MVDPGKRAYANRINFRGNTKTADEVLRREMRQMEGGWASTY--LIDQS-KVR--LERLGF 394
Query: 87 FQQVQIEIDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWG---KMPN 143
F++V +E A G D +I + V+E + +T S+G + + ++ G N
Sbjct: 395 FKEVNVETPAVPGTDDQ----VDINYAVEE--QASGNITASVGFAQSAGLILGGSISQNN 448
Query: 144 LYGRGELAEMSYVYGTKSLVYNLTLRKPFFGP 175
+ G G A + YN P+F P
Sbjct: 449 ILGTGNFASLGMTRSEYQTKYNFAFTNPYFTP 480
Score = 68 (29.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 408 SLGGTVYWQGAYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQ-DMSASEITSKWRKLG 466
+LGG + G P+PF K K + R + F + G++ D T +
Sbjct: 688 ALGGNILITGGMEYLFPMPFVKDQK-----SLRTSLFWDFGTVYADKCYLSTTQNCGNIN 742
Query: 467 -EELRISYGIGLAIRFAGLARVEINYCFPYSYQRDDSVVPGMQFGFGITF 515
+++ S G+G+ ++ L + + P + +D+ QF G TF
Sbjct: 743 IDQMASSVGVGVTW-YSPLGPLSFDLAVPIK-KPEDAETQVFQFSLGQTF 790
>UNIPROTKB|Q2GD52 [details] [associations]
symbol:bamA "Outer membrane protein assembly factor BamA"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
GO:GO:0051205 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_506594.1
ProteinModelPortal:Q2GD52 STRING:Q2GD52 GeneID:3932170
KEGG:nse:NSE_0718 PATRIC:22681451 HOGENOM:HOG000127209 OMA:GVTWYSP
ProtClustDB:CLSK2528112 BioCyc:NSEN222891:GHFU-730-MONOMER
Uniprot:Q2GD52
Length = 744
Score = 98 (39.6 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 58/281 (20%), Positives = 114/281 (40%)
Query: 13 PYDELDSDPN-DAMLGHVMVAPARVDRVKVEGIGRTYDDIITDS--IKQTEIFKSSTFGQ 69
P + D+D D V R+ ++ + G RT D +I + + ++++ S
Sbjct: 316 PQYQPDADGRVDVTYYVVSTKKYRIRKINISGNIRTRDTVIRREMLLSENDLYQPSKVA- 374
Query: 70 LIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIG 129
+ R ++ L F +V IE + D + + RVKE ++ G
Sbjct: 375 ------DSRRRILNLGFFDEVYIE---ERKVD---DQNLILEVRVKERPTGTLNLSGGYG 422
Query: 130 NNEGSVVVWGKMPN-LYGRGELAEMSYVYGTKSLVYNLTL-RKPFFGPIDSMLSGSLLRQ 187
++ G + + N L+G + + + Y++ RK F + + +
Sbjct: 423 SDVGFFGNFSFVENNLFGTSDRLVVELQRASLGSNYSVEFQRKRIFDTFITAGASVFYKN 482
Query: 188 VNEMPASSCKLLEQGL--ILDYAILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYT 245
NE K G + Y+ L ++ + ++ I P +++ SAG
Sbjct: 483 RNEKANGLYKFSSVGGDGSVSYS-LRDDLRLHLGYSLSFDRIFDVDGDAPESVKRSAGTK 541
Query: 246 LKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGF 286
+ S++ + L+K D+ +PR+G + +FAG+GGDV F
Sbjct: 542 ILSAVSYSLFLNKLDNYFVPRYGYGVRFGNKFAGIGGDVKF 582
Score = 88 (36.0 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 48/193 (24%), Positives = 83/193 (43%)
Query: 303 SSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLFQVNYPLGPYI-TAQ 361
S++ + L+K D+ +PR+G + +FAG+GGDV F + S F+ + + +A
Sbjct: 544 SAVSYSLFLNKLDNYFVPRYGYGVRFGNKFAGIGGDVKFLR--SDFKAGGFVSIFDQSAV 601
Query: 362 ASL--DAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKS--GGSSLGGTVYWQG 417
SL AG + +S D GIGP+ G +LGG + G
Sbjct: 602 LSLVVRAGNIFGYSGQGV----DVANRFFLNEMRGFDSLGIGPRDVDTGDALGGNSFILG 657
Query: 418 AYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYGIGL 477
+ P+ P + + + FF G++ + ++T++ LR S G GL
Sbjct: 658 TAEVQVPMRL--PVEL----DLKAAFFYEVGTLAGV---DVTAEKVYDSHALRSSIGAGL 708
Query: 478 AIRFA-GLARVEI 489
G+ RV++
Sbjct: 709 VWNSPFGVLRVDV 721
>TIGR_CMR|NSE_0718 [details] [associations]
symbol:NSE_0718 "outer membrane protein, OMP85 family"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
GO:GO:0051205 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG4775 KO:K07277 GO:GO:0043165 InterPro:IPR023707
PIRSF:PIRSF006076 TIGRFAMs:TIGR03303 RefSeq:YP_506594.1
ProteinModelPortal:Q2GD52 STRING:Q2GD52 GeneID:3932170
KEGG:nse:NSE_0718 PATRIC:22681451 HOGENOM:HOG000127209 OMA:GVTWYSP
ProtClustDB:CLSK2528112 BioCyc:NSEN222891:GHFU-730-MONOMER
Uniprot:Q2GD52
Length = 744
Score = 98 (39.6 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 58/281 (20%), Positives = 114/281 (40%)
Query: 13 PYDELDSDPN-DAMLGHVMVAPARVDRVKVEGIGRTYDDIITDS--IKQTEIFKSSTFGQ 69
P + D+D D V R+ ++ + G RT D +I + + ++++ S
Sbjct: 316 PQYQPDADGRVDVTYYVVSTKKYRIRKINISGNIRTRDTVIRREMLLSENDLYQPSKVA- 374
Query: 70 LIFQCHEVRNQLERLQCFQQVQIEIDASKGPDATPEHGYEITFRVKELKRYRAGVTTSIG 129
+ R ++ L F +V IE + D + + RVKE ++ G
Sbjct: 375 ------DSRRRILNLGFFDEVYIE---ERKVD---DQNLILEVRVKERPTGTLNLSGGYG 422
Query: 130 NNEGSVVVWGKMPN-LYGRGELAEMSYVYGTKSLVYNLTL-RKPFFGPIDSMLSGSLLRQ 187
++ G + + N L+G + + + Y++ RK F + + +
Sbjct: 423 SDVGFFGNFSFVENNLFGTSDRLVVELQRASLGSNYSVEFQRKRIFDTFITAGASVFYKN 482
Query: 188 VNEMPASSCKLLEQGL--ILDYAILFPTIKNSIEWNGLIREIQPASRGTPFAIRESAGYT 245
NE K G + Y+ L ++ + ++ I P +++ SAG
Sbjct: 483 RNEKANGLYKFSSVGGDGSVSYS-LRDDLRLHLGYSLSFDRIFDVDGDAPESVKRSAGTK 541
Query: 246 LKSSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGF 286
+ S++ + L+K D+ +PR+G + +FAG+GGDV F
Sbjct: 542 ILSAVSYSLFLNKLDNYFVPRYGYGVRFGNKFAGIGGDVKF 582
Score = 88 (36.0 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 48/193 (24%), Positives = 83/193 (43%)
Query: 303 SSLKFITSLDKRDDKILPRHGQFCQGSVEFAGLGGDVGFQKYSSLFQVNYPLGPYI-TAQ 361
S++ + L+K D+ +PR+G + +FAG+GGDV F + S F+ + + +A
Sbjct: 544 SAVSYSLFLNKLDNYFVPRYGYGVRFGNKFAGIGGDVKFLR--SDFKAGGFVSIFDQSAV 601
Query: 362 ASL--DAGLLGSFSQDKTFTLCDXXXXXXXXXXXXXAHYGIGPKS--GGSSLGGTVYWQG 417
SL AG + +S D GIGP+ G +LGG + G
Sbjct: 602 LSLVVRAGNIFGYSGQGV----DVANRFFLNEMRGFDSLGIGPRDVDTGDALGGNSFILG 657
Query: 418 AYHIYTPLPFTKPTKGSFSDNFRLNFFANAGSIQDMSASEITSKWRKLGEELRISYGIGL 477
+ P+ P + + + FF G++ + ++T++ LR S G GL
Sbjct: 658 TAEVQVPMRL--PVEL----DLKAAFFYEVGTLAGV---DVTAEKVYDSHALRSSIGAGL 708
Query: 478 AIRFA-GLARVEI 489
G+ RV++
Sbjct: 709 VWNSPFGVLRVDV 721
>UNIPROTKB|Q74AT3 [details] [associations]
symbol:yaeT "Outer membrane protein assembly factor BamA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827
Pfam:PF01103 Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051205 KO:K07277
GO:GO:0043165 InterPro:IPR023707 PIRSF:PIRSF006076
TIGRFAMs:TIGR03303 OMA:IEPRITR RefSeq:NP_953317.1
ProteinModelPortal:Q74AT3 GeneID:2687454 KEGG:gsu:GSU2268
PATRIC:22027391 HOGENOM:HOG000017982 ProtClustDB:CLSK828786
BioCyc:GSUL243231:GH27-2244-MONOMER Uniprot:Q74AT3
Length = 765
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 67/258 (25%), Positives = 105/258 (40%)
Query: 37 DRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDA 96
DR+ V G +T D +I +K E S+ G + + +L L F++ I
Sbjct: 354 DRINVSGNTKTRDKVIRRELKVAEGETYSSTG-----LKQSKQRLMNLGFFEEAAIS--T 406
Query: 97 SKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMP--NLYGRGELAEMS 154
KG + E+ ++ VKE + + +G ++ G + N G G A ++
Sbjct: 407 VKG---SAENKLDVNIEVKEKPTGTFSIGAGYSSLDG-LIGQGSVSQGNFLGLGLRANLA 462
Query: 155 YVYGTKSLVYNLTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTI 214
G KS +NL L P+F L G L R + + + + Y L T+
Sbjct: 463 ASIGGKSSTFNLGLTDPYFLDTRWTLGGDLYRTERDYLDFTRRATGGDIKAGYP-LSDTL 521
Query: 215 KNSIEWNGLIREI---QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFC 271
+ + +EI PA R P E+ T SS+ + D D ++ P G
Sbjct: 522 RTLWVYKYEQKEIFDISPALRVVP----ETNSTT--SSIYVSLTRDTTDYRLDPTRGMVN 575
Query: 272 QGSVEFAGLGGDVGFQKY 289
SVEFAGLGG F +Y
Sbjct: 576 NLSVEFAGLGGTNRFLRY 593
>TIGR_CMR|GSU_2268 [details] [associations]
symbol:GSU_2268 "outer membrane protein, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0009279 "cell outer membrane" evidence=ISS]
HAMAP:MF_01430 InterPro:IPR000184 InterPro:IPR010827 Pfam:PF01103
Pfam:PF07244 GO:GO:0016021 GO:GO:0005886 GO:GO:0009279
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0051205 KO:K07277
GO:GO:0043165 InterPro:IPR023707 PIRSF:PIRSF006076
TIGRFAMs:TIGR03303 OMA:IEPRITR RefSeq:NP_953317.1
ProteinModelPortal:Q74AT3 GeneID:2687454 KEGG:gsu:GSU2268
PATRIC:22027391 HOGENOM:HOG000017982 ProtClustDB:CLSK828786
BioCyc:GSUL243231:GH27-2244-MONOMER Uniprot:Q74AT3
Length = 765
Score = 124 (48.7 bits), Expect = 0.00032, P = 0.00032
Identities = 67/258 (25%), Positives = 105/258 (40%)
Query: 37 DRVKVEGIGRTYDDIITDSIKQTEIFKSSTFGQLIFQCHEVRNQLERLQCFQQVQIEIDA 96
DR+ V G +T D +I +K E S+ G + + +L L F++ I
Sbjct: 354 DRINVSGNTKTRDKVIRRELKVAEGETYSSTG-----LKQSKQRLMNLGFFEEAAIS--T 406
Query: 97 SKGPDATPEHGYEITFRVKELKRYRAGVTTSIGNNEGSVVVWGKMP--NLYGRGELAEMS 154
KG + E+ ++ VKE + + +G ++ G + N G G A ++
Sbjct: 407 VKG---SAENKLDVNIEVKEKPTGTFSIGAGYSSLDG-LIGQGSVSQGNFLGLGLRANLA 462
Query: 155 YVYGTKSLVYNLTLRKPFFGPIDSMLSGSLLRQVNEMPASSCKLLEQGLILDYAILFPTI 214
G KS +NL L P+F L G L R + + + + Y L T+
Sbjct: 463 ASIGGKSSTFNLGLTDPYFLDTRWTLGGDLYRTERDYLDFTRRATGGDIKAGYP-LSDTL 521
Query: 215 KNSIEWNGLIREI---QPASRGTPFAIRESAGYTLKSSLKFITSLDKRDDKILPRHGQFC 271
+ + +EI PA R P E+ T SS+ + D D ++ P G
Sbjct: 522 RTLWVYKYEQKEIFDISPALRVVP----ETNSTT--SSIYVSLTRDTTDYRLDPTRGMVN 575
Query: 272 QGSVEFAGLGGDVGFQKY 289
SVEFAGLGG F +Y
Sbjct: 576 NLSVEFAGLGGTNRFLRY 593
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 516 503 0.00085 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 617 (66 KB)
Total size of DFA: 286 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.67u 0.09s 37.76t Elapsed: 00:00:12
Total cpu time: 37.69u 0.09s 37.78t Elapsed: 00:00:13
Start: Thu Aug 15 12:37:38 2013 End: Thu Aug 15 12:37:51 2013