Query psy2170
Match_columns 78
No_of_seqs 104 out of 353
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 18:06:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2170.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2170hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o7d_A Lysosomal alpha-mannosi 99.8 1.3E-20 4.6E-25 139.6 6.0 66 6-71 12-85 (298)
2 3bvx_A Alpha-mannosidase 2; fa 99.8 1.4E-19 4.9E-24 150.5 6.2 65 7-71 80-144 (1045)
3 2wyh_A Alpha-mannosidase; hydr 99.7 4E-17 1.4E-21 133.7 6.2 64 7-71 25-89 (923)
4 3lvt_A Glycosyl hydrolase, fam 99.6 9.4E-17 3.2E-21 131.8 4.8 65 6-71 5-70 (899)
5 1k1x_A 4-alpha-glucanotransfer 73.8 4 0.00014 32.8 4.5 56 8-67 4-60 (659)
6 3i5q_B Nucleoporin NUP170; hel 70.8 3.1 0.0001 30.1 2.9 56 14-72 153-213 (252)
7 3i5p_A Nucleoporin NUP170; hel 36.4 29 0.00099 27.3 3.4 56 14-72 426-486 (525)
8 2jz8_A Uncharacterized protein 30.3 9.6 0.00033 23.7 -0.2 11 11-21 4-14 (87)
9 2juw_A UPF0352 protein SO_2176 23.6 45 0.0015 20.4 1.9 23 28-50 6-28 (80)
10 2jpq_A UPF0352 protein VP2129; 23.2 46 0.0016 20.5 1.9 23 28-50 6-28 (83)
11 1oi7_A Succinyl-COA synthetase 22.8 39 0.0013 23.9 1.8 38 38-78 187-231 (288)
12 2jrx_A UPF0352 protein YEJL; h 21.1 45 0.0015 20.5 1.6 23 28-50 6-28 (83)
13 2yv1_A Succinyl-COA ligase [AD 20.8 45 0.0015 23.7 1.8 37 38-78 193-236 (294)
14 2jr2_A UPF0352 protein CPS_261 20.5 40 0.0014 20.5 1.2 23 28-50 6-28 (76)
15 2nu8_A Succinyl-COA ligase [AD 20.3 61 0.0021 22.8 2.4 38 38-78 187-231 (288)
No 1
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=99.81 E-value=1.3e-20 Score=139.58 Aligned_cols=66 Identities=39% Similarity=0.888 Sum_probs=60.6
Q ss_pred ccceEEEeeCccCCchhhhhHHHHHHH--------hHhhHHHHHHHHHhcCCCCeEEhhhHHHHHHHHhhcccc
Q psy2170 6 LLTIVFLVPHSHNDPGWLKTFESYYHS--------QTRMILNNMVEKLVQHPNMTFIWSEISFFSQWWERSRKL 71 (78)
Q Consensus 6 ~~~~VhlVPHSH~D~GWl~T~eeYy~~--------~v~~Ildsvv~~L~~dp~rrF~~~Ei~ff~~Ww~~q~~~ 71 (78)
.+.+||+|||||+|+||+.|+++||.+ .+.++++++++.|+++|+++|+|+|++||.+||+++.++
T Consensus 12 ~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~~~~Pe 85 (298)
T 1o7d_A 12 DMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWRQQTNA 85 (298)
T ss_dssp SSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHTSCHH
T ss_pred CceEEEEeCCCCCcccccccHHHhhccccchhHHHHHHHHHHHHHHHHHHCCCCeEEEecchHhHHHHHhcCHH
Confidence 356799999999999999999999974 588999999999999999999999999999999887654
No 2
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=99.78 E-value=1.4e-19 Score=150.48 Aligned_cols=65 Identities=48% Similarity=0.990 Sum_probs=61.6
Q ss_pred cceEEEeeCccCCchhhhhHHHHHHHhHhhHHHHHHHHHhcCCCCeEEhhhHHHHHHHHhhcccc
Q psy2170 7 LTIVFLVPHSHNDPGWLKTFESYYHSQTRMILNNMVEKLVQHPNMTFIWSEISFFSQWWERSRKL 71 (78)
Q Consensus 7 ~~~VhlVPHSH~D~GWl~T~eeYy~~~v~~Ildsvv~~L~~dp~rrF~~~Ei~ff~~Ww~~q~~~ 71 (78)
+.+||+|||||+|+||+.|+++||...++++++++++.|++||++||+|+|++||.+||+++.++
T Consensus 80 ~~~V~lV~HsH~D~gWl~t~~e~~~~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~e~~Pe 144 (1045)
T 3bvx_A 80 KLKVFVVPHSHNDPGWIQTFEEYYQHDTKHILSNALRHLHDNPEMKFIWAEISYFARFYHDLGEN 144 (1045)
T ss_dssp CEEEEEEEEEECCSSSSSCHHHHHHHTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHHSCHH
T ss_pred ceEEEEEecCCCCccccchHHHhhhHHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHHHCCHH
Confidence 56899999999999999999999998899999999999999999999999999999999987654
No 3
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=99.67 E-value=4e-17 Score=133.74 Aligned_cols=64 Identities=17% Similarity=0.334 Sum_probs=57.1
Q ss_pred cceEEEeeCccCCchhhhhHHHHHHHhHhhHHHHHHHHHhcCCCCe-EEhhhHHHHHHHHhhcccc
Q psy2170 7 LTIVFLVPHSHNDPGWLKTFESYYHSQTRMILNNMVEKLVQHPNMT-FIWSEISFFSQWWERSRKL 71 (78)
Q Consensus 7 ~~~VhlVPHSH~D~GWl~T~eeYy~~~v~~Ildsvv~~L~~dp~rr-F~~~Ei~ff~~Ww~~q~~~ 71 (78)
+++||+|||||+|+||+.|+++|+. .+.++++++++.|++||+++ |+|+|..++-+||.++.++
T Consensus 25 ~~~v~~v~HsH~D~~Wl~t~~~~~~-~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~~~p~ 89 (923)
T 2wyh_A 25 TKKVHIISHSHWDREWYMAYEQHHM-RLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLKVRPE 89 (923)
T ss_dssp CEEEEEEEBCBCCSSSSSCHHHHHH-HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGG
T ss_pred ceEEEEEccCCCCcccccHHHHHHH-HHHHHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHHCHH
Confidence 5789999999999999999999975 77799999999999999998 9998876666899877654
No 4
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=99.64 E-value=9.4e-17 Score=131.84 Aligned_cols=65 Identities=17% Similarity=0.299 Sum_probs=52.6
Q ss_pred ccceEEEeeCccCCchhhhhHHHHHHHhHhhHHHHHHHHHhcCCCCeEEhhh-HHHHHHHHhhcccc
Q psy2170 6 LLTIVFLVPHSHNDPGWLKTFESYYHSQTRMILNNMVEKLVQHPNMTFIWSE-ISFFSQWWERSRKL 71 (78)
Q Consensus 6 ~~~~VhlVPHSH~D~GWl~T~eeYy~~~v~~Ildsvv~~L~~dp~rrF~~~E-i~ff~~Ww~~q~~~ 71 (78)
|+++||+|||||+|+||+.|+++|+. .+.++++++++.|+++|+++|++.| ..+|.+||.++.++
T Consensus 5 ~~~~v~~v~HsH~D~~Wl~t~~e~~~-~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~ 70 (899)
T 3lvt_A 5 TKKKVYIVSHSHWDREWYLPYEEHHM-RLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPE 70 (899)
T ss_dssp CCEEEEEEEEECC----CCCHHHHHH-HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGG
T ss_pred ccceEEEECCCCCChHhcCcHHHHHH-HHHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHH
Confidence 35689999999999999999999976 7789999999999999999998864 55777899877654
No 5
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=73.82 E-value=4 Score=32.80 Aligned_cols=56 Identities=20% Similarity=0.175 Sum_probs=37.9
Q ss_pred ceEEEeeCccCCchh-hhhHHHHHHHhHhhHHHHHHHHHhcCCCCeEEhhhHHHHHHHHhh
Q psy2170 8 TIVFLVPHSHNDPGW-LKTFESYYHSQTRMILNNMVEKLVQHPNMTFIWSEISFFSQWWER 67 (78)
Q Consensus 8 ~~VhlVPHSH~D~GW-l~T~eeYy~~~v~~Ildsvv~~L~~dp~rrF~~~Ei~ff~~Ww~~ 67 (78)
..|.+|-|.|.|.+| .-.++ .-+..-...+++.|.+.|+.||...=...+-.|.++
T Consensus 4 ~~l~lv~H~HqP~~~~~~~~e----~a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~ 60 (659)
T 1k1x_A 4 INFIFGIHNHQPLGNFGWVFE----EAYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEE 60 (659)
T ss_dssp EEEEEEEEECCCTTCCHHHHH----HHHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHH
T ss_pred eEEEEEEEccCCCccCcHHHH----HHHHHHHHHHHHHHHhCCCcEEEEEccHHHHHHHHH
Confidence 479999999999994 22232 233345556888889999999884445555556543
No 6
>3i5q_B Nucleoporin NUP170; helical stack, membrane, mRNA transport, nuclear pore complex, nucleus, phosphoprotein, protein transport; 2.20A {Saccharomyces cerevisiae}
Probab=70.79 E-value=3.1 Score=30.06 Aligned_cols=56 Identities=20% Similarity=0.513 Sum_probs=37.5
Q ss_pred eCccCCchhhhhH-HHH---HHHhHhhHHHHHHHHHhcCCCCeEEhhhHHHH-HHHHhhccccc
Q psy2170 14 PHSHNDPGWLKTF-ESY---YHSQTRMILNNMVEKLVQHPNMTFIWSEISFF-SQWWERSRKLR 72 (78)
Q Consensus 14 PHSH~D~GWl~T~-eeY---y~~~v~~Ildsvv~~L~~dp~rrF~~~Ei~ff-~~Ww~~q~~~~ 72 (78)
|.-+.++||+-.. -+- | +.+-.++++++.. .+.+++|+-.||.|| +.|..+..+.|
T Consensus 153 ~~~~~~~gwv~~~fl~~gV~~-~~L~~vl~~L~~~--~g~~~~~~~~ei~~li~~W~~~~~r~r 213 (252)
T 3i5q_B 153 PKEHIVSGSIVSIFITAGVSF-NKMYYILKELIET--SDSDNSVFNKEMTWLIHEWYKSDRKFR 213 (252)
T ss_dssp CGGGCCTTTTHHHHHHHTCCH-HHHHHHHHHHHHT--CSSCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cccCCCCCcHHHHHHHcCCCH-HHHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHHHHHhHHh
Confidence 4457788998742 111 1 1344678888877 566778999999886 66777766655
No 7
>3i5p_A Nucleoporin NUP170; helical stack, membrane, mRNA transport, nuclear pore complex, nucleus, phosphoprotein, protein transport; 3.20A {Saccharomyces cerevisiae}
Probab=36.35 E-value=29 Score=27.27 Aligned_cols=56 Identities=20% Similarity=0.513 Sum_probs=36.7
Q ss_pred eCccCCchhhhhH-HHH---HHHhHhhHHHHHHHHHhcCCCCeEEhhhHHHH-HHHHhhccccc
Q psy2170 14 PHSHNDPGWLKTF-ESY---YHSQTRMILNNMVEKLVQHPNMTFIWSEISFF-SQWWERSRKLR 72 (78)
Q Consensus 14 PHSH~D~GWl~T~-eeY---y~~~v~~Ildsvv~~L~~dp~rrF~~~Ei~ff-~~Ww~~q~~~~ 72 (78)
|..+.++||+-.. -+- + +.+-.+++++++. .+.+++++-.||.|+ +.|..+..+.|
T Consensus 426 ~~~~~~~~wv~~~~~~~gv~~-~~l~~vy~~l~~~--~~~~~~~~~~~~~~li~~W~~~~~~~~ 486 (525)
T 3i5p_A 426 PKEHIVSGSIVSIFITAGVSF-NKMYYILKELIET--SDSDNSVFNKEMTWLIHEWYKSDRKFR 486 (525)
T ss_dssp CGGGCCTTTTHHHHHHHTCCH-HHHHHHHHHHHHH--CCSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccCCCCChHHHHHHHcCCCH-HHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667889998642 211 1 1344677777777 555667888899876 67777766555
No 8
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=30.34 E-value=9.6 Score=23.74 Aligned_cols=11 Identities=45% Similarity=0.908 Sum_probs=9.0
Q ss_pred EEeeCccCCch
Q psy2170 11 FLVPHSHNDPG 21 (78)
Q Consensus 11 hlVPHSH~D~G 21 (78)
++|||-|+|.|
T Consensus 4 ~~iphf~n~~~ 14 (87)
T 2jz8_A 4 YNIPHFQNDLG 14 (87)
T ss_dssp SCCCCBCCSSC
T ss_pred ccccceecCCC
Confidence 46899999876
No 9
>2juw_A UPF0352 protein SO_2176; homodimer, helix, dimer, all alpha, northeast structural GEN consortium, NESG, structural genomics; NMR {Shewanella oneidensis} SCOP: a.284.1.1 PDB: 2qti_A
Probab=23.62 E-value=45 Score=20.43 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=18.8
Q ss_pred HHHHHhHhhHHHHHHHHHhcCCC
Q psy2170 28 SYYHSQTRMILNNMVEKLVQHPN 50 (78)
Q Consensus 28 eYy~~~v~~Ildsvv~~L~~dp~ 50 (78)
.|-..++..|++.++..|+++..
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~A 28 (80)
T 2juw_A 6 KYSNTQVESLIAEILVVLEKHKA 28 (80)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHHHHhcCC
Confidence 35567889999999999998754
No 10
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural genomics, PSI-2, protein structure initiative; NMR {Vibrio parahaemolyticus} SCOP: a.284.1.1
Probab=23.20 E-value=46 Score=20.51 Aligned_cols=23 Identities=26% Similarity=0.345 Sum_probs=18.7
Q ss_pred HHHHHhHhhHHHHHHHHHhcCCC
Q psy2170 28 SYYHSQTRMILNNMVEKLVQHPN 50 (78)
Q Consensus 28 eYy~~~v~~Ildsvv~~L~~dp~ 50 (78)
.|-..++..|++.++..|+++..
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~A 28 (83)
T 2jpq_A 6 KYTDEQVEKILAEVALVLEKHAA 28 (83)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccHHHHHHHHHHHHHHHHhcCC
Confidence 35567889999999999998754
No 11
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=22.76 E-value=39 Score=23.93 Aligned_cols=38 Identities=16% Similarity=0.354 Sum_probs=28.1
Q ss_pred HHHHHHHHhcCCCCe--EEhhhHH-----HHHHHHhhccccccccccC
Q psy2170 38 LNNMVEKLVQHPNMT--FIWSEIS-----FFSQWWERSRKLRIIPIVA 78 (78)
Q Consensus 38 ldsvv~~L~~dp~rr--F~~~Ei~-----ff~~Ww~~q~~~~~~~~~~ 78 (78)
+..+++.|.+||+-+ -++.|.. ++.++-+. .|-.|||+
T Consensus 187 ~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~ 231 (288)
T 1oi7_A 187 FKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD---HMKKPVVG 231 (288)
T ss_dssp HHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH---HCCSCEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEE
Confidence 557889999999999 5677753 66666653 56678874
No 12
>2jrx_A UPF0352 protein YEJL; homodimer, alpha helix, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: a.284.1.1
Probab=21.13 E-value=45 Score=20.55 Aligned_cols=23 Identities=22% Similarity=0.411 Sum_probs=18.5
Q ss_pred HHHHHhHhhHHHHHHHHHhcCCC
Q psy2170 28 SYYHSQTRMILNNMVEKLVQHPN 50 (78)
Q Consensus 28 eYy~~~v~~Ildsvv~~L~~dp~ 50 (78)
.|-..++..|++.++..|+++..
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~A 28 (83)
T 2jrx_A 6 RYSDEQVEQLLAELLNVLEKHKA 28 (83)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHHHHhcCC
Confidence 46667888999999999998643
No 13
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=20.84 E-value=45 Score=23.67 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCCe--EEhhhHH-----HHHHHHhhccccccccccC
Q psy2170 38 LNNMVEKLVQHPNMT--FIWSEIS-----FFSQWWERSRKLRIIPIVA 78 (78)
Q Consensus 38 ldsvv~~L~~dp~rr--F~~~Ei~-----ff~~Ww~~q~~~~~~~~~~ 78 (78)
+..+++.|.+||+-+ -++.|.. ++.++-.. |-.|||+
T Consensus 193 ~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~~~~~~~~----~~KPVv~ 236 (294)
T 2yv1_A 193 YKEVLDLFEKDDETEAIVMIGEIGGGAEEEAAKFIEK----MKKPVIG 236 (294)
T ss_dssp HHHHHHHHHTCTTCSEEEEEEESSSSHHHHHHHHHTT----CSSCEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh----CCCCEEE
Confidence 557889999999998 6677763 66777654 6678874
No 14
>2jr2_A UPF0352 protein CPS_2611; dimer, all alpha helix, homodimer, structural genomics, PSI, structure initiative; NMR {Colwellia psychrerythraea} SCOP: a.284.1.1 PDB: 2ota_A
Probab=20.52 E-value=40 Score=20.48 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=18.3
Q ss_pred HHHHHhHhhHHHHHHHHHhcCCC
Q psy2170 28 SYYHSQTRMILNNMVEKLVQHPN 50 (78)
Q Consensus 28 eYy~~~v~~Ildsvv~~L~~dp~ 50 (78)
.|-..++..|++.++..|+++..
T Consensus 6 KYsd~qvE~ll~eli~VLEKH~A 28 (76)
T 2jr2_A 6 KYSNERVEKIIQDLLDVLVKEEV 28 (76)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHHHHhcCC
Confidence 35567888999999999998743
No 15
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=20.32 E-value=61 Score=22.77 Aligned_cols=38 Identities=16% Similarity=0.292 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCCe--EEhhhH-----HHHHHHHhhccccccccccC
Q psy2170 38 LNNMVEKLVQHPNMT--FIWSEI-----SFFSQWWERSRKLRIIPIVA 78 (78)
Q Consensus 38 ldsvv~~L~~dp~rr--F~~~Ei-----~ff~~Ww~~q~~~~~~~~~~ 78 (78)
+..+++.|.+||+-+ -++.|. .+..++-+. .|-.|||+
T Consensus 187 ~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~ 231 (288)
T 2nu8_A 187 FIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE---HVTKPVVG 231 (288)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH---HCCSCEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEE
Confidence 457889999999999 667886 366666654 56788874
Done!