BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2172
(291 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/283 (86%), Positives = 260/283 (91%)
Query: 1 MDYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS 60
MDY+FK+K S+ER +VEDLF+YEGCKVGRGTYGHVYKA+RKD D +DYALKQIEGTG+S
Sbjct: 3 MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS 62
Query: 61 MSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXX 120
MSACREIALLRELKHPNVI+L VFLSH DRKVWLLFDYAEHDLWHIIKFHRA+KAN
Sbjct: 63 MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP 122
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
SLLYQILDGIHYLH+NWVLHRDLKPANILVMGEG ERGRVKIADMGFARLF
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
N+PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 241 IKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKMPEHPTLLKDF 283
IKTSNPYHHDQLDRIF+VMGFP +KDWEDI+KMPEH TL+KDF
Sbjct: 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDF 285
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 155/253 (61%), Gaps = 33/253 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
KVG GTYG VYKA+ +S R ALK+I E G+ +A REI+LL+EL HPN+++L
Sbjct: 28 KVGEGTYGVVYKAK---DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
I V H++R + L+F++ E DL ++ ++ + LYQ+L G+ +
Sbjct: 85 IDVI--HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY--------LYQLLRGVAH 134
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H + +LHRDLKP N+L+ +G +K+AD G AR F P++ VVT WYRA
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTH---EVVTLWYRA 187
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
P++L+G++ Y+ ++DIW+IGCIFAE++T +P+F +D DQL +IFS++G
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD---------DQLPKIFSILGT 238
Query: 262 PLEKDWEDIRKMP 274
P ++W ++++P
Sbjct: 239 PNPREWPQVQELP 251
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 155/253 (61%), Gaps = 33/253 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
KVG GTYG VYKA+ +S R ALK+I E G+ +A REI+LL+EL HPN+++L
Sbjct: 28 KVGEGTYGVVYKAK---DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
I V H++R + L+F++ E DL ++ ++ + LYQ+L G+ +
Sbjct: 85 IDVI--HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY--------LYQLLRGVAH 134
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H + +LHRDLKP N+L+ +G +K+AD G AR F P++ VVT WYRA
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTH---EVVTLWYRA 187
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
P++L+G++ Y+ ++DIW+IGCIFAE++T +P+F +D DQL +IFS++G
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD---------DQLPKIFSILGT 238
Query: 262 PLEKDWEDIRKMP 274
P ++W ++++P
Sbjct: 239 PNPREWPQVQELP 251
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 158/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ + DL KF A+ S L+Q+L G+ +
Sbjct: 71 LDVI--HTENKLYLVFEHVDQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 174
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 225
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLSF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 223 PDEVVWPGVTSMPDY 237
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 223 PDEVVWPGVTSMPDY 237
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 69 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 119
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRA 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 223
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 224 PDEVVWPGVTSMPDY 238
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 67 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 117
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 170
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 221
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 222 PDEVVWPGVTSMPDY 236
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 67 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 117
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 170
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 221
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 17 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 75 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 125
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 178
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 229
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 230 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 264
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 17 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 75 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 125
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 178
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 229
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 230 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 264
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 72 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 122
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTH---EVVTLWYRA 175
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 226
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 261
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 70 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 120
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 173
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 224
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 71 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 174
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 225
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 70 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 120
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 173
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 224
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 223 PDEVVWPGVTSMPDY 237
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 14 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 72 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 122
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 175
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 226
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 261
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 69 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 119
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 223
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 67 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 117
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 170
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 221
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 178 bits (451), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 71 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 174
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 225
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 223 PDEVVWPGVTSMPDY 237
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 70 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 120
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 173
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 224
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 71 LDVI--HTENKLYLVFEFLSMDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 122 CHSHRVLHRDLKPENLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 174
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 225
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 147/255 (57%), Gaps = 31/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 67 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 117
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 170
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 221
Query: 262 PLEKDWEDIRKMPEH 276
P E W + MP++
Sbjct: 222 PDEVVWPGVTSMPDY 236
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 69 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 119
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGA----IKLADFGLARAFGVPVRTYXH---EVVTLWYRA 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 223
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 69 LDVI--HTENKLYLVFEFLSMDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 119
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 120 CHSHRVLHRDLKPENLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 223
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 157/275 (57%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 11 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 69 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 119
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 223
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 258
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 176 bits (447), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL K A A S L+Q+L G+ +
Sbjct: 67 LDVI--HTENKLYLVFEHVHQDL----KTFMDASA---LTGIPLPLIKSYLFQLLQGLAF 117
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 170
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 221
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL K A A S L+Q+L G+ +
Sbjct: 71 LDVI--HTENKLYLVFEFLHQDL----KTFMDASA---LTGIPLPLIKSYLFQLLQGLAF 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 174
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 225
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + AL +I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + AL +I E G+ +A REI+LL+EL HPN++ L
Sbjct: 9 KIGEGTYGVVYKARNKLTGEV--VALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL KF A+ S L+Q+L G+ +
Sbjct: 67 LDVI--HTENKLYLVFEFLHQDLK---KFMDASALTGIPLPLIK----SYLFQLLQGLAF 117
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYTH---EVVTLWYRA 170
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 221
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 10 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL F A+ S L+Q+L G+ +
Sbjct: 68 LDVI--HTENKLYLVFEFLHQDLK---DFMDASALTGIPLPLIK----SYLFQLLQGLAF 118
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 119 CHSHRVLHRDLKPENLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 171
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 222
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 257
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 12 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL F A+ S L+Q+L G+ +
Sbjct: 70 LDVI--HTENKLYLVFEFLSMDLK---DFMDASALTGIPLPLIK----SYLFQLLQGLAF 120
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 173
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 224
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 259
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 156/275 (56%), Gaps = 36/275 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKAR K + ALK+I E G+ +A REI+LL+EL HPN++ L
Sbjct: 13 KIGEGTYGVVYKARNKLTGEV--VALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V H + K++L+F++ DL F A+ S L+Q+L G+ +
Sbjct: 71 LDVI--HTENKLYLVFEFLSMDLK---DFMDASALTGIPLPLIK----SYLFQLLQGLAF 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS+ VLHRDLKP N+L+ EG +K+AD G AR F P++ VVT WYRA
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEG----AIKLADFGLARAFGVPVRTYXH---EVVTLWYRA 174
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
PE+LLG ++Y+ A+DIW++GCIFAE++T +F E DQL RIF +G
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI---------DQLFRIFRTLGT 225
Query: 262 PLEKDWEDIRKMPEH-PTLLK----DFNEQICKME 291
P E W + MP++ P+ K DF++ + ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 260
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 145/255 (56%), Gaps = 33/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKA+ N+ +ALK+I E G+ + REI++L+ELKH N++ L
Sbjct: 9 KIGEGTYGVVYKAQ---NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V H +++ L+F++ + DL ++ S L Q+L+GI Y
Sbjct: 66 YDVI--HTKKRLVLVFEHLDQDLKKLLDVCEGG--------LESVTAKSFLLQLLNGIAY 115
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H VLHRDLKP N+L+ EG +KIAD G AR F P++ VVT WYRA
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG----ELKIADFGLARAFGIPVRKYTH---EVVTLWYRA 168
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
P++L+G++ Y+ IDIW++GCIFAE++ P+F E DQL RIF ++G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---------ADQLMRIFRILGT 219
Query: 262 PLEKDWEDIRKMPEH 276
P K+W ++ ++P++
Sbjct: 220 PNSKNWPNVTELPKY 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/255 (38%), Positives = 145/255 (56%), Gaps = 33/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKA+ N+ +ALK+I E G+ + REI++L+ELKH N++ L
Sbjct: 9 KIGEGTYGVVYKAQ---NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V H +++ L+F++ + DL ++ S L Q+L+GI Y
Sbjct: 66 YDVI--HTKKRLVLVFEHLDQDLKKLLDVCEGG--------LESVTAKSFLLQLLNGIAY 115
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H VLHRDLKP N+L+ EG +KIAD G AR F P++ VVT WYRA
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG----ELKIADFGLARAFGIPVRKYTH---EVVTLWYRA 168
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
P++L+G++ Y+ IDIW++GCIFAE++ P+F E DQL RIF ++G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSE---------ADQLMRIFRILGT 219
Query: 262 PLEKDWEDIRKMPEH 276
P K+W ++ ++P++
Sbjct: 220 PNSKNWPNVTELPKY 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/255 (37%), Positives = 145/255 (56%), Gaps = 33/255 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG VYKA+ N+ +ALK+I E G+ + REI++L+ELKH N++ L
Sbjct: 9 KIGEGTYGVVYKAQ---NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V H +++ L+F++ + DL ++ S L Q+L+GI Y
Sbjct: 66 YDVI--HTKKRLVLVFEHLDQDLKKLLDVCEGG--------LESVTAKSFLLQLLNGIAY 115
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H VLHRDLKP N+L+ EG +KIAD G AR F P++ +VT WYRA
Sbjct: 116 CHDRRVLHRDLKPQNLLINREG----ELKIADFGLARAFGIPVRKYTH---EIVTLWYRA 168
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGF 261
P++L+G++ Y+ IDIW++GCIFAE++ P+F E DQL RIF ++G
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---------ADQLMRIFRILGT 219
Query: 262 PLEKDWEDIRKMPEH 276
P K+W ++ ++P++
Sbjct: 220 PNSKNWPNVTELPKY 234
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 144/256 (56%), Gaps = 30/256 (11%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVIN 80
K+G GTYG VYKA D A+K+I E G+ +A RE++LL+EL+H N+I
Sbjct: 40 TKLGEGTYGEVYKA--IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIE 97
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L SV H++ ++ L+F+YAE+DL K S LYQ+++G++
Sbjct: 98 LKSVI--HHNHRLHLIFEYAENDL---------KKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 141 YLHSNWVLHRDLKPANILV-MGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
+ HS LHRDLKP N+L+ + + E +KI D G AR F P++ ++T WY
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH---EIITLWY 203
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
R PE+LLG+RHY+ ++DIW+I CI+AE+L P+F E DQL +IF V+
Sbjct: 204 RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI---------DQLFKIFEVL 254
Query: 260 GFPLEKDWEDIRKMPE 275
G P + W + +P+
Sbjct: 255 GLPDDTTWPGVTALPD 270
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 147/256 (57%), Gaps = 33/256 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG V+KA+ ++ + ALK++ + G+ SA REI LL+ELKH N++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEI--VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V H+D+K+ L+F++ + DL K+ + + S L+Q+L G+ +
Sbjct: 67 HDVL--HSDKKLTLVFEFCDQDLK---KYFDSCNGDLDPEIVK-----SFLFQLLKGLGF 116
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS VLHRDLKP N+L+ G +K+AD G AR F P++ + VVT WYR
Sbjct: 117 CHSRNVLHRDLKPQNLLIN----RNGELKLADFGLARAFGIPVRCYS---AEVVTLWYRP 169
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
P++L GA+ Y+ +ID+W+ GCIFAEL + P+F D DQL RIF ++G
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD---------DQLKRIFRLLG 220
Query: 261 FPLEKDWEDIRKMPEH 276
P E+ W + K+P++
Sbjct: 221 TPTEEQWPSMTKLPDY 236
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 147/256 (57%), Gaps = 33/256 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G GTYG V+KA+ ++ + ALK++ + G+ SA REI LL+ELKH N++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEI--VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V H+D+K+ L+F++ + DL K+ + + S L+Q+L G+ +
Sbjct: 67 HDVL--HSDKKLTLVFEFCDQDLK---KYFDSCNGDLDPEIVK-----SFLFQLLKGLGF 116
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
HS VLHRDLKP N+L+ G +K+A+ G AR F P++ + VVT WYR
Sbjct: 117 CHSRNVLHRDLKPQNLLIN----RNGELKLANFGLARAFGIPVRCYS---AEVVTLWYRP 169
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
P++L GA+ Y+ +ID+W+ GCIFAEL + P+F D DQL RIF ++G
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD---------DQLKRIFRLLG 220
Query: 261 FPLEKDWEDIRKMPEH 276
P E+ W + K+P++
Sbjct: 221 TPTEEQWPSMTKLPDY 236
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 140/254 (55%), Gaps = 26/254 (10%)
Query: 26 KVGRGTYGHVYKARRKDNS---DTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
K+G GTY VYK K ++ L EGT +A REI+L++ELKH N++ L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT--PSTAIREISLMKELKHENIVRLY 69
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
V H + K+ L+F++ ++DL K+ + +Q+L G+ +
Sbjct: 70 DVI--HTENKLTLVFEFMDNDL---KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
H N +LHRDLKP N+L+ +RG++K+ D G AR F P+ + VVT WYRAP
Sbjct: 125 HENKILHRDLKPQNLLIN----KRGQLKLGDFGLARAFGIPVNTFSS---EVVTLWYRAP 177
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGFP 262
++L+G+R Y+ +IDIW+ GCI AE++T +P+F ++ +QL IF +MG P
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---------EQLKLIFDIMGTP 228
Query: 263 LEKDWEDIRKMPEH 276
E W + K+P++
Sbjct: 229 NESLWPSVTKLPKY 242
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 140/260 (53%), Gaps = 35/260 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE-------GTGLSMSACREIALLRELKHPNVI 79
+G G + VYKAR K+ + A+K+I+ G++ +A REI LL+EL HPN+I
Sbjct: 18 LGEGQFATVYKARDKNTNQI--VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ F + + L+FD+ E DL IIK + + + L G+
Sbjct: 76 GLLDAF--GHKSNISLVFDFMETDLEVIIKDNSLV--------LTPSHIKAYMLMTLQGL 125
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YLH +W+LHRDLKP N+L+ E G +K+AD G A+ F +P + VVT WY
Sbjct: 126 EYLHQHWILHRDLKPNNLLL----DENGVLKLADFGLAKSFGSPNRAYXH---QVVTRWY 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPELL GAR Y +D+WA+GCI AELL P F D+ DQL RIF +
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELLLRVP-FLPGDSDL--------DQLTRIFETL 229
Query: 260 GFPLEKDWEDIRKMPEHPTL 279
G P E+ W D+ +P++ T
Sbjct: 230 GTPTEEQWPDMCSLPDYVTF 249
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 138/260 (53%), Gaps = 37/260 (14%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT----GLSMSACREIALLRELK---HPN 77
++G G YG VYKAR D ALK + GL +S RE+ALLR L+ HPN
Sbjct: 10 AEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 78 VINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V+ L+ V S DR KV L+F++ + DL R L+ Q
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDL-------RTYLDKAPPPGLPAETIKDLMRQ 120
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
L G+ +LH+N ++HRDLKP NILV G VK+AD G AR+++ + LDPVV
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGT----VKLADFGLARIYSYQMA----LDPVV 172
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 254
VT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F E DQL +
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE---------ADQLGK 222
Query: 255 IFSVMGFPLEKDWEDIRKMP 274
IF ++G P E DW +P
Sbjct: 223 IFDLIGLPPEDDWPRDVSLP 242
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 137/260 (52%), Gaps = 37/260 (14%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT----GLSMSACREIALLRELK---HPN 77
++G G YG VYKAR D ALK + GL +S RE+ALLR L+ HPN
Sbjct: 10 AEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 78 VINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V+ L+ V S DR KV L+F++ + DL R L+ Q
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDL-------RTYLDKAPPPGLPAETIKDLMRQ 120
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
L G+ +LH+N ++HRDLKP NILV G VK+AD G AR+++ + L PVV
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGT----VKLADFGLARIYSYQMA----LAPVV 172
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 254
VT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F E DQL +
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE---------ADQLGK 222
Query: 255 IFSVMGFPLEKDWEDIRKMP 274
IF ++G P E DW +P
Sbjct: 223 IFDLIGLPPEDDWPRDVSLP 242
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/260 (38%), Positives = 137/260 (52%), Gaps = 37/260 (14%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT----GLSMSACREIALLRELK---HPN 77
++G G YG VYKAR D ALK + GL +S RE+ALLR L+ HPN
Sbjct: 10 AEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 78 VINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V+ L+ V S DR KV L+F++ + DL R L+ Q
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDL-------RTYLDKAPPPGLPAETIKDLMRQ 120
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
L G+ +LH+N ++HRDLKP NILV G VK+AD G AR+++ + L PVV
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGT----VKLADFGLARIYSYQMA----LFPVV 172
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 254
VT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F E DQL +
Sbjct: 173 VTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE---------ADQLGK 222
Query: 255 IFSVMGFPLEKDWEDIRKMP 274
IF ++G P E DW +P
Sbjct: 223 IFDLIGLPPEDDWPRDVSLP 242
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 152/285 (53%), Gaps = 49/285 (17%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELK-HPNVIN 80
K+G+G YG V+K+ + + A+K+I + + + REI +L EL H N++N
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEV--VAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L++V + NDR V+L+FDY E DL H +AN ++YQ++ I
Sbjct: 74 LLNVLRADNDRDVYLVFDYMETDL------HAVIRANILEPVHKQY----VVYQLIKVIK 123
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK-----PLA------- 188
YLHS +LHRD+KP+NIL+ E VK+AD G +R F N + PL+
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAEC----HVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 189 --DLDPV----VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D P+ V T WYRAPE+LLG+ YTK ID+W++GCI E+L +PIF
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF-------- 231
Query: 243 TSNPYHHDQLDRIFSVMGFPLEKDWEDIRKMPEHPTLLKDFNEQI 287
+QL+RI V+ FP +D E I+ P T+++ E++
Sbjct: 232 -PGSSTMNQLERIIGVIDFPSNEDVESIQS-PFAKTMIESLKEKV 274
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 138/263 (52%), Gaps = 40/263 (15%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIE-------GTGLSMSACREIALLRELK--- 74
++G G YG VYKAR D ALK + G GL +S RE+ALLR L+
Sbjct: 15 AEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 75 HPNVINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
HPNV+ L+ V S DR KV L+F++ + DL R L
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL-------RTYLDKAPPPGLPAETIKDL 125
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
+ Q L G+ +LH+N ++HRDLKP NILV G VK+AD G AR+++ + L
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGT----VKLADFGLARIYSYQMA----LT 177
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 251
PVVVT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F E DQ
Sbjct: 178 PVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSE---------ADQ 227
Query: 252 LDRIFSVMGFPLEKDWEDIRKMP 274
L +IF ++G P E DW +P
Sbjct: 228 LGKIFDLIGLPPEDDWPRDVSLP 250
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 36/262 (13%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIE----GTGLSMSACREIALLRELK---HPN 77
++G G YG V+KAR N R ALK++ G+ +S RE+A+LR L+ HPN
Sbjct: 17 AEIGEGAYGKVFKARDLKNGG-RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 78 VINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V+ L V +S DR K+ L+F++ + DL + +++Q
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD-------KVPEPGVPTETIKDMMFQ 128
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L G+ +LHS+ V+HRDLKP NILV G++K+AD G AR+++ + L VV
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSS----GQIKLADFGLARIYSFQMA----LTSVV 180
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 254
VT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F + DQL +
Sbjct: 181 VTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSD---------VDQLGK 230
Query: 255 IFSVMGFPLEKDWEDIRKMPEH 276
I V+G P E+DW +P
Sbjct: 231 ILDVIGLPGEEDWPRDVALPRQ 252
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 36/262 (13%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIE----GTGLSMSACREIALLRELK---HPN 77
++G G YG V+KAR N R ALK++ G+ +S RE+A+LR L+ HPN
Sbjct: 17 AEIGEGAYGKVFKARDLKNGG-RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 78 VINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V+ L V +S DR K+ L+F++ + DL + +++Q
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD-------KVPEPGVPTETIKDMMFQ 128
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L G+ +LHS+ V+HRDLKP NILV G++K+AD G AR+++ + L VV
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSS----GQIKLADFGLARIYSFQMA----LTSVV 180
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 254
VT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F + DQL +
Sbjct: 181 VTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSD---------VDQLGK 230
Query: 255 IFSVMGFPLEKDWEDIRKMPEH 276
I V+G P E+DW +P
Sbjct: 231 ILDVIGLPGEEDWPRDVALPRQ 252
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 150 bits (380), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 141/262 (53%), Gaps = 36/262 (13%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIE----GTGLSMSACREIALLRELK---HPN 77
++G G YG V+KAR N R ALK++ G+ +S RE+A+LR L+ HPN
Sbjct: 17 AEIGEGAYGKVFKARDLKNGG-RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 78 VINLISV-FLSHNDR--KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V+ L V +S DR K+ L+F++ + DL + +++Q
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD-------KVPEPGVPTETIKDMMFQ 128
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L G+ +LHS+ V+HRDLKP NILV G++K+AD G AR+++ + L VV
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSS----GQIKLADFGLARIYSFQMA----LTSVV 180
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 254
VT WYRAPE+LL + Y +D+W++GCIFAE+ +P+F + DQL +
Sbjct: 181 VTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSD---------VDQLGK 230
Query: 255 IFSVMGFPLEKDWEDIRKMPEH 276
I V+G P E+DW +P
Sbjct: 231 ILDVIGLPGEEDWPRDVALPRQ 252
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 134/263 (50%), Gaps = 45/263 (17%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLI 82
K+G GTY VYK + K + ALK+I G +A RE++LL++LKH N++ L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNL--VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 83 SVFLSHNDRKVWLLFDYAEHDL-------WHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
+ H ++ + L+F+Y + DL +II H L+Q+
Sbjct: 67 DII--HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVK---------------LFLFQL 109
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
L G+ Y H VLHRDLKP N+L+ ERG +K+AD G AR + P K D VV
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLIN----ERGELKLADFGLARAKSIPTK---TYDNEVV 162
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
T WYR P++LLG+ Y+ ID+W +GCIF E+ T P+F + +QL I
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE---------EQLHFI 213
Query: 256 FSVMGFPLEKDWEDIRKMPEHPT 278
F ++G P E+ W I E T
Sbjct: 214 FRILGTPTEETWPGILSNEEFKT 236
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 124/226 (54%), Gaps = 25/226 (11%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVIN 80
K+G+GT+G V+KAR + + ALK++ E G ++A REI +L+ LKH NV+N
Sbjct: 24 AKIGQGTFGEVFKARHRKTG--QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 81 LISVFLS----HNDRK--VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
LI + + +N K ++L+FD+ EHDL A + ++
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDL--------AGLLSNVLVKFTLSEIKRVMQM 133
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD-LDPV 193
+L+G++Y+H N +LHRD+K AN+L+ +G+ +K+AD G AR F+ +
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
VVT WYR PELLLG R Y ID+W GCI AE+ T PI E
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 30/240 (12%)
Query: 11 NERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACRE 66
+E +K E L K+G+GT+G V+KAR + + ALK++ E G ++A RE
Sbjct: 14 DEVSKYEKL-----AKIGQGTFGEVFKARHRKTG--QKVALKKVLMENEKEGFPITALRE 66
Query: 67 IALLRELKHPNVINLISVFLS----HNDRK--VWLLFDYAEHDLWHIIKFHRAAKANXXX 120
I +L+ LKH NV+NLI + + +N K ++L+FD+ EHDL A +
Sbjct: 67 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL--------AGLLSNVL 118
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
++ +L+G++Y+H N +LHRD+K AN+L+ +G+ +K+AD G AR F
Sbjct: 119 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAF 174
Query: 181 NNPLKPLAD-LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ + VVT WYR PELLLG R Y ID+W GCI AE+ T PI E
Sbjct: 175 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 121/225 (53%), Gaps = 25/225 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G+GT+G V+KAR + + ALK++ E G ++A REI +L+ LKH NV+NL
Sbjct: 25 KIGQGTFGEVFKARHRKTG--QKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 82 ISVFLSHND------RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
I + + ++L+FD+ EHDL A + ++ +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDL--------AGLLSNVLVKFTLSEIKRVMQML 134
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD-LDPVV 194
L+G++Y+H N +LHRD+K AN+L+ +G+ +K+AD G AR F+ + V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
VT WYR PELLLG R Y ID+W GCI AE+ T PI E
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 140 bits (352), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 130/240 (54%), Gaps = 30/240 (12%)
Query: 11 NERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACRE 66
+E +K E L K+G+GT+G V+KAR + + ALK++ E G ++A RE
Sbjct: 15 DEVSKYEKL-----AKIGQGTFGEVFKARHRKTG--QKVALKKVLMENEKEGFPITALRE 67
Query: 67 IALLRELKHPNVINLISVFLS----HNDRK--VWLLFDYAEHDLWHIIKFHRAAKANXXX 120
I +L+ LKH NV+NLI + + +N K ++L+FD+ EHDL A +
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL--------AGLLSNVL 119
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
++ +L+G++Y+H N +LHRD+K AN+L+ +G+ +K+AD G AR F
Sbjct: 120 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV----LKLADFGLARAF 175
Query: 181 NNPLKPLAD-LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ + VVT WYR PELLLG R Y ID+W GCI AE+ T PI E
Sbjct: 176 SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 122/215 (56%), Gaps = 27/215 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINL 81
K+G G+YG V+K R +D A+K+ + + A REI +L++LKHPN++NL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQI--VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHII-KFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ VF R++ L+F+Y +H + H + ++ R + S+ +Q L ++
Sbjct: 68 LEVF--RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK---------SITWQTLQAVN 116
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL-DPVVVTFWY 199
+ H + +HRD+KP NIL+ + +K+ D GFARL P +D D V T WY
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSV----IKLCDFGFARLLTGP----SDYYDDEVATRWY 168
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
R+PELL+G Y +D+WAIGC+FAELL+ P++
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLW 203
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 23/212 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
VG G+YG V K R KD R A+K+ + + A REI LL++L+H N++NL+
Sbjct: 33 VGEGSYGMVMKCRNKDTG--RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
V ++ +L+F++ +H + ++ L+QI++GI +
Sbjct: 91 EV--CKKKKRWYLVFEFVDHTILDDLELFPNG--------LDYQVVQKYLFQIINGIGFC 140
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HS+ ++HRD+KP NILV G+ VK+ D GFAR P + D V T WYRAP
Sbjct: 141 HSHNIIHRDIKPENILVSQSGV----VKLCDFGFARTLAAPGEVY---DDEVATRWYRAP 193
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
ELL+G Y KA+D+WAIGC+ E+ EP+F
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 130/253 (51%), Gaps = 31/253 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A D+ A+K+I E REI +L +H NVI +
Sbjct: 51 IGEGAYGMVSSAY--DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 84 VFLSHN---DRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + R V+++ D E DL+ ++K + + + LYQIL G+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY----------FLYQILRGLK 158
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 159 YIHSANVLHRDLKPSNLLIN----TTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 265
Query: 261 FPLEKDWEDIRKM 273
P ++D I M
Sbjct: 266 SPSQEDLNCIINM 278
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTX----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 245
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 246 SPSQEDLNXI 255
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTX----DLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 245
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 246 SPSQEDLNXI 255
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 33 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 140
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 141 YIHSANVLHRDLKPSNLLLN----TTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 247
Query: 261 FPLEKD 266
P ++D
Sbjct: 248 SPSQED 253
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 39 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 146
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 147 YIHSANVLHRDLKPSNLLLN----TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 253
Query: 261 FPLEKD 266
P ++D
Sbjct: 254 SPSQED 259
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 139 YIHSANVLHRDLKPSNLLLN----TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 245
Query: 261 FPLEKD 266
P ++D
Sbjct: 246 SPSQED 251
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 33 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 140
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 247
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 248 SPSQEDLNCI 257
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 51 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 158
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 159 YIHSANVLHRDLKPSNLLLN----TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 265
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 266 SPSQEDLNCI 275
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 245
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 246 SPSQEDLNCI 255
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 31 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTX----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 245
Query: 261 FPLEKD 266
P ++D
Sbjct: 246 SPSQED 251
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 33 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 140
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 247
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 248 SPSQEDLNCI 257
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 29 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 136
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 243
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 244 SPSQEDLNCI 253
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 36 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 143
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 199
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 250
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 251 SPSQEDLNCI 260
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 37 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 144
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 200
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 251
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 252 SPSQEDLNCI 261
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 28 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 135
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 191
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 242
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 243 SPSQEDLNCI 252
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 142
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 249
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 250 SPSQEDLNCI 259
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 142
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTX----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 249
Query: 261 FPLEKD 266
P ++D
Sbjct: 250 SPSQED 255
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY----------FLYQILRGLK 142
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 249
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 250 SPSQEDLNCI 259
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 142
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 249
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 250 SPSQEDLNCI 259
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 36 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 143
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 250
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 251 SPSQEDLNCI 260
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 31/246 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 142
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTX----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 249
Query: 261 FPLEKD 266
P ++D
Sbjct: 250 SPSQED 255
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 29 IGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 136
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 243
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 244 SPEQEDLNCI 253
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+++I E REI +L +H N+I +
Sbjct: 35 IGEGAYGMVCSAY--DNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+++ D E DL+ ++K + + LYQIL G+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY----------FLYQILRGLK 142
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTC----DLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 249
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 250 SPSQEDLNCI 259
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 127/250 (50%), Gaps = 31/250 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI---EGTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A DN + A+K+I E REI +L +H N+I +
Sbjct: 51 IGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + + V+L+ DL+ ++K + + LYQIL G+
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY----------FLYQILRGLK 158
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y+HS VLHRDLKP+N+L+ +KI D G AR+ + L V T WYR
Sbjct: 159 YIHSANVLHRDLKPSNLLLN----TTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE++L ++ YTK+IDIW++GCI AE+L++ PIF + ++ DQL+ I ++G
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---------HYLDQLNHILGILG 265
Query: 261 FPLEKDWEDI 270
P ++D I
Sbjct: 266 SPSQEDLNCI 275
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 32/240 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
VG G YG V A K + + A+K++ + + A RE+ LL+ ++H NVI L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGE--KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
VF + + + +D + ++ F + L+YQ+L G+ Y+
Sbjct: 90 DVFTPASSLRNF-------YDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYI 142
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HS V+HRDLKP N+ V E +KI D G AR + A++ VVT WYRAP
Sbjct: 143 HSAGVVHRDLKPGNLAVN----EDCELKILDFGLARHAD------AEMTGYVVTRWYRAP 192
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGFP 262
E++L HY + +DIW++GCI AE+LT + +F + + DQL +I V G P
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD---------YLDQLTQILKVTGVP 243
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 121/240 (50%), Gaps = 32/240 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
VG G YG V A K + + A+K++ + + A RE+ LL+ ++H NVI L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGE--KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
VF + + + +D + ++ F + L+YQ+L G+ Y+
Sbjct: 108 DVFTPASSLRNF-------YDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYI 160
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HS V+HRDLKP N+ V E +KI D G AR + A++ VVT WYRAP
Sbjct: 161 HSAGVVHRDLKPGNLAVN----EDCELKILDFGLARHAD------AEMTGYVVTRWYRAP 210
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGFP 262
E++L HY + +DIW++GCI AE+LT + +F + + DQL +I V G P
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD---------YLDQLTQILKVTGVP 261
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 68/299 (22%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G G+YGHV +A D + R A+K+I + C REIA+L L H +V+ ++
Sbjct: 61 IGTGSYGHVCEAY--DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 83 SVFLSHNDRK---VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+ + + K ++++ + A+ D + + +LLY +L G+
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFR---------TPVYLTELHIKTLLYNLLVGV 169
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP--------LKPLAD-- 189
Y+HS +LHRDLKPAN LV + VK+ D G AR + P + P D
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDC----SVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 190 --------------LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT------ 229
L VVT WYRAPEL+L +YT+AID+W+IGCIFAELL
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
Query: 230 -----SEPIFHCR-----QEDIKTSNPY------HHDQLDRIFSVMGFPLEKDWEDIRK 272
P+F D K N + + DQL+ IF+++G P E+D E + K
Sbjct: 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEK 344
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 122/245 (49%), Gaps = 33/245 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGT----GLSMSACREIALLRELKHPNVINLI 82
+G G YG V ARR+ + A+K+I + RE+ +L+ KH N+I +
Sbjct: 62 IGNGAYGVVSSARRRLTG--QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 83 SVF---LSHND-RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ + + + + V+++ D E DL II + LYQ+L G
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY---------FLYQLLRG 170
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTF 197
+ Y+HS V+HRDLKP+N+LV E +KI D G AR L +P + + V T
Sbjct: 171 LKYMHSAQVIHRDLKPSNLLVN----ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFS 257
WYRAPEL+L YT+AID+W++GCIF E+L +F + Y H QL I
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--------YVH-QLQLIMM 277
Query: 258 VMGFP 262
V+G P
Sbjct: 278 VLGTP 282
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 37/243 (15%)
Query: 27 VGRGTYGHV---YKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLIS 83
VG G YG V Y AR + + + + + + RE+ LL+ LKH NVI L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 84 VFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
VF +V+L+ DL +I+K + + L+YQ+L G+
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF----------LVYQLLRGL 144
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y+HS ++HRDLKP+N+ V E ++I D G AR + ++ V T WY
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVN----EDSELRILDFGLARQADE------EMTGYVATRWY 194
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPE++L HY + +DIW++GCI AELL + +F + DQL RI V+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD---------YIDQLKRIMEVV 245
Query: 260 GFP 262
G P
Sbjct: 246 GTP 248
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 37/243 (15%)
Query: 27 VGRGTYGHV---YKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLIS 83
VG G YG V Y AR + + + + + + RE+ LL+ LKH NVI L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 84 VFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
VF +V+L+ DL +I+K + + L+YQ+L G+
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF----------LVYQLLRGL 144
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y+HS ++HRDLKP+N+ V E ++I D G AR + ++ V T WY
Sbjct: 145 KYIHSAGIIHRDLKPSNVAVN----EDSELRILDFGLARQADE------EMTGYVATRWY 194
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPE++L HY + +DIW++GCI AELL + +F + DQL RI V+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD---------YIDQLKRIMEVV 245
Query: 260 GFP 262
G P
Sbjct: 246 GTP 248
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 122/245 (49%), Gaps = 33/245 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGT----GLSMSACREIALLRELKHPNVINLI 82
+G G YG V ARR+ + A+K+I + RE+ +L+ KH N+I +
Sbjct: 63 IGNGAYGVVSSARRRLTG--QQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 83 SVF---LSHND-RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ + + + + V+++ D E DL II + LYQ+L G
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRY---------FLYQLLRG 171
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTF 197
+ Y+HS V+HRDLKP+N+LV E +KI D G AR L +P + + V T
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVN----ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFS 257
WYRAPEL+L YT+AID+W++GCIF E+L +F + Y H QL I
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--------YVH-QLQLIMM 278
Query: 258 VMGFP 262
V+G P
Sbjct: 279 VLGTP 283
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 119/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L A HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ + + A RE+ LL+ ++H NVI L+
Sbjct: 33 VGSGAYGAVCSA--VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF +L+ + DL ++K + + L+YQ+L G
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF----------LVYQMLKG 140
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+H+ ++HRDLKP N+ V E +KI D G AR + +++ VVT W
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVN----EDCELKILDFGLARQAD------SEMXGXVVTRW 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L YT+ +DIW++GCI AE++T + +F K S+ H DQL I V
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF-------KGSD--HLDQLKEIMKV 241
Query: 259 MGFP 262
G P
Sbjct: 242 TGTP 245
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 119/243 (48%), Gaps = 37/243 (15%)
Query: 27 VGRGTYGHV---YKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLIS 83
VG G YG V Y AR + + + + + + RE+ LL+ LKH NVI L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 84 VFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
VF +V+L+ DL +I+K + + L+YQ+L G+
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF----------LVYQLLRGL 136
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y+HS ++HRDLKP+N+ V E ++I D G AR + ++ V T WY
Sbjct: 137 KYIHSAGIIHRDLKPSNVAVN----EDCELRILDFGLARQADE------EMTGYVATRWY 186
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPE++L HY + +DIW++GCI AELL + +F + DQL RI V+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD---------YIDQLKRIMEVV 237
Query: 260 GFP 262
G P
Sbjct: 238 GTP 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 36 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 143
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVN----EDSELKILDFGLARHTDD------EMTGYVATRW 193
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 244
Query: 259 MGFP 262
+G P
Sbjct: 245 VGTP 248
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 32 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVN----EDSELKILDFGLARHTDD------EMTGYVATRW 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 240
Query: 259 MGFP 262
+G P
Sbjct: 241 VGTP 244
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDXELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 42 VGSGAYGSVCAAF--DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 149
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 250
Query: 259 MGFP 262
+G P
Sbjct: 251 VGTP 254
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 41 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 148
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVN----EDXELKILDFGLARHTDD------EMTGYVATRW 198
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 249
Query: 259 MGFP 262
+G P
Sbjct: 250 VGTP 253
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 40 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 98 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 147
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 197
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 248
Query: 259 MGFP 262
+G P
Sbjct: 249 VGTP 252
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 141/294 (47%), Gaps = 61/294 (20%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+GRG+YG+VY A D + ++ A+K++ + C REI +L LK +I L
Sbjct: 34 IGRGSYGYVYLAY--DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLY 91
Query: 83 SVFLSHNDRK---VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+ + + K ++++ + A+ DL + K ++LY +L G
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSDLKKLFK---------TPIFLTEEHIKTILYNLLLGE 142
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN-----NPLKPLAD----- 189
+++H + ++HRDLKPAN L+ + VK+ D G AR N N + L +
Sbjct: 143 NFIHESGIIHRDLKPANCLLNQDC----SVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 190 ---------LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-----------T 229
L VVT WYRAPEL+L +YTK+IDIW+ GCIFAELL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 230 SEPIF---HC-----RQEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKMPE 275
P+F C + K + DQL+ IF+++G P E D ++I K PE
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINK-PE 311
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 49 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 156
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 206
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 257
Query: 259 MGFP 262
+G P
Sbjct: 258 VGTP 261
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 50 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 157
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMXGXVATRW 207
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 258
Query: 259 MGFP 262
+G P
Sbjct: 259 VGTP 262
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 137/277 (49%), Gaps = 40/277 (14%)
Query: 5 FKIKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA 63
K+ S+ +T + Y CKV G G++G V++A+ ++ + A+K++
Sbjct: 25 IKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEV---AIKKVLQD--KRFK 79
Query: 64 CREIALLRELKHPNVINLISVFLSHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXX 119
RE+ ++R +KHPNV++L + F S+ D+K + L+ +Y ++ + + K
Sbjct: 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP 139
Query: 120 XXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL 179
+YQ+L + Y+HS + HRD+KP N+L+ G +K+ D G A++
Sbjct: 140 MLLIKLY-----MYQLLRSLAYIHSIGICHRDIKPQNLLL---DPPSGVLKLIDFGSAKI 191
Query: 180 FNNPLKPLADLDP---VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
L +P + + +YRAPEL+ GA +YT IDIW+ GC+ AEL+ +P+F
Sbjct: 192 -------LIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG 244
Query: 237 RQEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
DQL I V+G P E I+ M
Sbjct: 245 ES---------GIDQLVEIIKVLGTP---SREQIKTM 269
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 50 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 157
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 207
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 258
Query: 259 MGFP 262
+G P
Sbjct: 259 VGTP 262
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMAGFVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 35 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN----EDXELKILDFGLARHTDD------EMTGYVATRW 192
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 243
Query: 259 MGFP 262
+G P
Sbjct: 244 VGTP 247
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMAGFVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 42 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 149
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 250
Query: 259 MGFP 262
+G P
Sbjct: 251 VGTP 254
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 42 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 149
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 250
Query: 259 MGFP 262
+G P
Sbjct: 251 VGTP 254
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 41 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 148
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 198
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 249
Query: 259 MGFP 262
+G P
Sbjct: 250 VGTP 253
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 32 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 240
Query: 259 MGFP 262
+G P
Sbjct: 241 VGTP 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 50 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 157
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 207
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 258
Query: 259 MGFP 262
+G P
Sbjct: 259 VGTP 262
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 32 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 240
Query: 259 MGFP 262
+G P
Sbjct: 241 VGTP 244
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 35 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 192
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 243
Query: 259 MGFP 262
+G P
Sbjct: 244 VGTP 247
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 29 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 136
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 186
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 237
Query: 259 MGFP 262
+G P
Sbjct: 238 VGTP 241
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGXVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 36 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 143
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 193
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 244
Query: 259 MGFP 262
+G P
Sbjct: 245 VGTP 248
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 53 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 160
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 210
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 261
Query: 259 MGFP 262
+G P
Sbjct: 262 VGTP 265
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 49 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 156
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 206
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 257
Query: 259 MGFP 262
+G P
Sbjct: 258 VGTP 261
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 32 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 240
Query: 259 MGFP 262
+G P
Sbjct: 241 VGTP 244
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 37 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 194
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 245
Query: 259 MGFP 262
+G P
Sbjct: 246 VGTP 249
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 122/258 (47%), Gaps = 42/258 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V + D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 59 VGSGAYGSVCSSY--DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 166
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 216
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY +DIW++GCI AELLT +F H +QL +I +
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD---------HINQLQQIMRL 267
Query: 259 MGFPLEKDWEDIRKMPEH 276
G P I +MP H
Sbjct: 268 TGTP---PASVISRMPSH 282
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 36 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 143
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 193
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF---------PGTDHIDQLKLILRL 244
Query: 259 MGFP 262
+G P
Sbjct: 245 VGTP 248
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 26 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMAGFVATRW 183
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 234
Query: 259 MGFP 262
+G P
Sbjct: 235 VGTP 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 26 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 183
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 234
Query: 259 MGFP 262
+G P
Sbjct: 235 VGTP 238
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDAGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 27 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 134
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 184
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 235
Query: 259 MGFP 262
+G P
Sbjct: 236 VGTP 239
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 53 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 160
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMXGYVATRW 210
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 261
Query: 259 MGFP 262
+G P
Sbjct: 262 VGTP 265
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 28 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 135
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 185
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 236
Query: 259 MGFP 262
+G P
Sbjct: 237 VGTP 240
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 35 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 192
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 243
Query: 259 MGFP 262
+G P
Sbjct: 244 VGTP 247
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 27 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 134
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 184
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 235
Query: 259 MGFP 262
+G P
Sbjct: 236 VGTP 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
+G G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 35 IGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVN----EDXELKILDFGLARHTDD------EMTGYVATRW 192
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 243
Query: 259 MGFP 262
+G P
Sbjct: 244 VGTP 247
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 26 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 183
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 234
Query: 259 MGFP 262
+G P
Sbjct: 235 VGTP 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 115/227 (50%), Gaps = 29/227 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS--ACREIALLRELKHPNVINLISV 84
+G G G V+ A DN + A+K+I T A REI ++R L H N++ + +
Sbjct: 19 LGCGGNGLVFSA--VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 85 FLSHNDR------------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
+ V+++ +Y E DL ++++ + + +
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL----------FM 126
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L G+ Y+HS VLHRDLKPAN+ + E + +KI D G AR+ + L
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDL---VLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+VT WYR+P LLL +YTKAID+WA GCIFAE+LT + +F E
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDYGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 36 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 143
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 193
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF---------PGTDHIDQLKLILRL 244
Query: 259 MGFP 262
+G P
Sbjct: 245 VGTP 248
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDRGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G R ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDSELKILDFGLCRHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDGGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 37 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR + ++ V T W
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTAD------EMTGYVATRW 194
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 245
Query: 259 MGFP 262
+G P
Sbjct: 246 VGTP 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 37 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR + ++ V T W
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTAD------EMTGYVATRW 194
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 245
Query: 259 MGFP 262
+G P
Sbjct: 246 VGTP 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 37 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR + ++ V T W
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTAD------EMTGYVATRW 194
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 245
Query: 259 MGFP 262
+G P
Sbjct: 246 VGTP 249
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 26 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF----------LIYQILRG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D G AR ++ ++ V T W
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFGLARHTDD------EMTGYVATRW 183
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 234
Query: 259 MGFP 262
+G P
Sbjct: 235 VGTP 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI G AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILGFGLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM----SACREIALLRELKHPNVINLI 82
VG G YG V A D A+K++ S+ RE+ LL+ +KH NVI L+
Sbjct: 30 VGSGAYGSVCAAF--DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
VF V+L+ DL +I+K + + L+YQIL G
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF----------LIYQILRG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y+HS ++HRDLKP+N+ V E +KI D AR ++ ++ V T W
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVN----EDCELKILDFYLARHTDD------EMTGYVATRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++L HY + +DIW++GCI AELLT +F H DQL I +
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD---------HIDQLKLILRL 238
Query: 259 MGFP 262
+G P
Sbjct: 239 VGTP 242
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTG---LSMSACREIALLRELKHPNVINLIS 83
+G G YG V A K + A+K+IE ++ REI +L+ KH N+I + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEI--VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ N +V+++ + + DL +I + + +YQ L +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY----------FIYQTLRAVK 126
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN-------PLKPLADLDPV 193
LH + V+HRDLKP+N+L+ +K+ D G AR+ + P + +
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNC----DLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 253
V T WYRAPE++L + Y++A+D+W+ GCI AEL PIF R Y H QL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD--------YRH-QLL 233
Query: 254 RIFSVMGFP 262
IF ++G P
Sbjct: 234 LIFGIIGTP 242
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTG---LSMSACREIALLRELKHPNVINLIS 83
+G G YG V A K + A+K+IE ++ REI +L+ KH N+I + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEI--VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ N +V+++ + + DL +I + + +YQ L +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY----------FIYQTLRAVK 126
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN-------PLKPLADLDPV 193
LH + V+HRDLKP+N+L+ +K+ D G AR+ + P + +
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNC----DLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 253
V T WYRAPE++L + Y++A+D+W+ GCI AEL PIF R Y H QL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD--------YRH-QLL 233
Query: 254 RIFSVMGFP 262
IF ++G P
Sbjct: 234 LIFGIIGTP 242
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 40/255 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISVF 85
+G G++G VY+A+ D+ + A+K++ +G RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQGKAFKN---RELQIMRKLDHCNIVRLRYFF 82
Query: 86 LSHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
S ++K + L+ DY ++ + + + AK +YQ+ + Y
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAY 137
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFW 198
+HS + HRD+KP N+L+ + +K+ D G A K L +P + + +
Sbjct: 138 IHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRY 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKV 238
Query: 259 MGFPLEKDWEDIRKM 273
+G P E IR+M
Sbjct: 239 LGTPTR---EQIREM 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 40/255 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISVF 85
+G G++G VY+A+ D+ + A+K++ +G RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQGKAFKN---RELQIMRKLDHCNIVRLRYFF 82
Query: 86 LSHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
S ++K + L+ DY ++ + + + AK +YQ+ + Y
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAY 137
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFW 198
+HS + HRD+KP N+L+ + +K+ D G A K L +P + + +
Sbjct: 138 IHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRY 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKV 238
Query: 259 MGFPLEKDWEDIRKM 273
+G P E IR+M
Sbjct: 239 LGTPTR---EQIREM 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 40/255 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISVF 85
+G G++G VY+A+ D+ + A+K++ +G RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQGKAFKN---RELQIMRKLDHCNIVRLRYFF 82
Query: 86 LSHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
S ++K + L+ DY ++ + + + AK +YQ+ + Y
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAY 137
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFW 198
+HS + HRD+KP N+L+ + +K+ D G A K L +P + + +
Sbjct: 138 IHSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRY 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKV 238
Query: 259 MGFPLEKDWEDIRKM 273
+G P E IR+M
Sbjct: 239 LGTPTR---EQIREM 250
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 119/249 (47%), Gaps = 38/249 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTG---LSMSACREIALLRELKHPNVINLIS 83
+G G YG V A K + A+K+IE ++ REI +L+ KH N+I + +
Sbjct: 19 LGEGAYGVVCSATHKPTGEI--VAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 84 VFLS---HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ N +V+++ + + DL +I + + +YQ L +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY----------FIYQTLRAVK 126
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN-------PLKPLADLDPV 193
LH + V+HRDLKP+N+L+ +K+ D G AR+ + P + +
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNC----DLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 253
V T WYRAPE++L + Y++A+D+W+ GCI AEL PIF R Y H QL
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD--------YRH-QLL 233
Query: 254 RIFSVMGFP 262
IF ++G P
Sbjct: 234 LIFGIIGTP 242
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 135/294 (45%), Gaps = 63/294 (21%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+GRG+YG+VY A D + ++ A+K++ + C REI +L LK +I L
Sbjct: 36 IGRGSYGYVYLAY--DKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLH 93
Query: 83 SVFLSHNDRK---VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+ + + K ++++ + A+ DL + K ++LY +L G
Sbjct: 94 DLIIPEDLLKFDELYIVLEIADSDLKKLFK---------TPIFLTEQHVKTILYNLLLGE 144
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--------NPLKPL---- 187
++H + ++HRDLKPAN L+ + VKI D G AR N N L+
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDC----SVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 188 ----------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE------ 231
L VVT WYRAPEL+L +YT +IDIW+ GCIFAELL
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 232 -----PIF---HC-----RQEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRK 272
P+F C K + DQL+ IF+V+G P E+D + I K
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITK 314
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 117
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 172
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 173 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 222
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 273
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 274 GTPTR---EQIREM 284
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 47 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 102
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 157
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 158 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 207
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 258
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 259 GTPTR---EQIREM 269
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 95
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 150
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 151 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 200
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 251
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 252 GTPTR---EQIREM 262
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 29 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 84
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAYI 139
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 140 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 189
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 240
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 241 GTPTR---EQIREM 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 56 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 111
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 166
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV---VTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P V + +Y
Sbjct: 167 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 216
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 267
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 268 GTPTR---EQIREM 278
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 36 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 91
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 146
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 147 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 196
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 247
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 248 GTPTR---EQIREM 258
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 83
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAYI 138
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 139 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 188
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 239
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 240 GTPTR---EQIREM 250
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 40 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 95
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 150
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 151 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 200
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 251
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 252 GTPTR---EQIREM 262
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 32 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 87
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAYI 142
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 143 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 192
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 243
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 244 GTPTR---EQIREM 254
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 83
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAYI 138
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 139 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 188
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 239
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 240 GTPTR---EQIREM 250
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 83
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAYI 138
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 139 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSXICSRYY 188
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 239
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 240 GTPTR---EQIREM 250
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 62 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 117
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 172
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV---VTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P V + +Y
Sbjct: 173 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 222
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 273
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 274 GTPTR---EQIREM 284
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 107 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 162
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 217
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV---VTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P V + +Y
Sbjct: 218 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 267
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 318
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 319 GTPTR---EQIREM 329
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 83
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY-----MYQLFRSLAYI 138
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 139 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 188
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 239
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 240 GTPTR---EQIREM 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 64 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 119
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 174
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV---VTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P V + +Y
Sbjct: 175 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 224
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 275
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 276 GTPTR---EQIREM 286
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 33 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 88
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 143
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV---VTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P V + +Y
Sbjct: 144 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 193
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 244
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 245 GTPTR---EQIREM 255
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 66 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 121
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 176
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV---VTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P V + +Y
Sbjct: 177 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 226
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 277
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 278 GTPTR---EQIREM 288
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 38/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G++G VY+A+ D+ + A+K++ + RE+ ++R+L H N++ L F
Sbjct: 41 IGNGSFGVVYQAKLCDSGEL--VAIKKVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFY 96
Query: 87 SHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
S ++K + L+ DY ++ + + + AK +YQ+ + Y+
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-----YMYQLFRSLAYI 151
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP---VVVTFWY 199
HS + HRD+KP N+L+ + +K+ D G A K L +P + + +Y
Sbjct: 152 HSFGICHRDIKPQNLLL---DPDTAVLKLCDFGSA-------KQLVRGEPNVSYICSRYY 201
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
RAPEL+ GA YT +ID+W+ GC+ AELL +PIF DQL I V+
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF---------PGDSGVDQLVEIIKVL 252
Query: 260 GFPLEKDWEDIRKM 273
G P E IR+M
Sbjct: 253 GTPTR---EQIREM 263
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----------LDHERMSYLL 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTAGTSFM----MTP 184
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 234
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 235 NKVIEQLGTP 244
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----------LDHERMSYLL 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTAGTSFM----MTP 184
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 234
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 235 NKVIEQLGTP 244
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLL 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTAGTSFM----MTP 184
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 234
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 235 NKVIEQLGTP 244
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 32/246 (13%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N+I L++VF + + D++ +++ A + LLYQ+L
Sbjct: 84 NIIGLLNVFTPQKSLEEF-------QDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
GI +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFM----MTPYVVT 188
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
+YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVI 238
Query: 257 SVMGFP 262
+G P
Sbjct: 239 EQLGTP 244
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----------LDHERMSYLL 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTAGTSFM----MTP 184
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 234
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 235 NKVIEQLGTP 244
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----------LDHERMSYLL 125
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXT----LKILDFGLARTAGTSFM----MTP 177
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 178 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 227
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 228 NKVIEQLGTP 237
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 32/246 (13%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N+I L++VF + + D++ +++ A + LLYQ+L
Sbjct: 84 NIIGLLNVFTPQKSLEEF-------QDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
GI +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFM----MTPYVVT 188
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
+YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVI 238
Query: 257 SVMGFP 262
+G P
Sbjct: 239 EQLGTP 244
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 70 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 176
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 228
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 229 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 278
Query: 259 MGFP 262
+G P
Sbjct: 279 LGTP 282
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 33 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 191
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 192 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 241
Query: 259 MGFP 262
+G P
Sbjct: 242 LGTP 245
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 32/246 (13%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N+I L++VF + + D++ +++ A + LLYQ+L
Sbjct: 84 NIIGLLNVFTPQKSLEEF-------QDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
GI +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFM----MTPYVVT 188
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
+YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVI 238
Query: 257 SVMGFP 262
+G P
Sbjct: 239 EQLGTP 244
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 138
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR ++P VVT +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MEPEVVTRY 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 191 YRAPEVILGM-GYKENVDIWSVGCIMGEMVCHKILFPGRD---------YIDQWNKVIEQ 240
Query: 259 MGFP 262
+G P
Sbjct: 241 LGTP 244
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLL 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTP 184
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 185 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 234
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 235 NKVIEQLGTP 244
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 70 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 176
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 228
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 229 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 278
Query: 259 MGFP 262
+G P
Sbjct: 279 LGTP 282
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLL 133
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTP 185
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 186 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 235
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 236 NKVIEQLGTP 245
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 32 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 138
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 191 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 240
Query: 259 MGFP 262
+G P
Sbjct: 241 LGTP 244
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 26 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 132
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 184
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 185 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 234
Query: 259 MGFP 262
+G P
Sbjct: 235 LGTP 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 77 NVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
N+I+L++VF + V+L+ + + +L +I+ LL
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLL 126
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
YQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR + P
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTP 178
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
VVT +YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ
Sbjct: 179 YVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQW 228
Query: 253 DRIFSVMGFP 262
+++ +G P
Sbjct: 229 NKVIEQLGTP 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 25 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 131
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 183
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 184 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 233
Query: 259 MGFP 262
+G P
Sbjct: 234 LGTP 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I+L+
Sbjct: 31 IGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+L+ + + +L +I+ LLYQ+L G
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 137
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ + +F R + DQ +++
Sbjct: 190 YRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRD---------YIDQWNKVIEQ 239
Query: 259 MGFP 262
+G P
Sbjct: 240 LGTP 243
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 103/204 (50%), Gaps = 33/204 (16%)
Query: 63 ACREIALLRELKHPNVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANX 118
A RE+ LL+ + H N+I+L++VF + V+L+ + + +L +I
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME------- 120
Query: 119 XXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR 178
LLYQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR
Sbjct: 121 ----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLAR 172
Query: 179 LFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
+ + P VVT +YRAPE++LG Y + +DIW++GCI EL+ IF
Sbjct: 173 TASTNFM----MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 239 EDIKTSNPYHHDQLDRIFSVMGFP 262
H DQ +++ +G P
Sbjct: 228 ---------HIDQWNKVIEQLGTP 242
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 33 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 191
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 192 YRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVIEQ 241
Query: 259 MGFP 262
+G P
Sbjct: 242 LGTP 245
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 138
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 191 YRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLF---------PGTDHIDQWNKVIEQ 240
Query: 259 MGFP 262
+G P
Sbjct: 241 LGTP 244
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 138
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 191 YRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVIEQ 240
Query: 259 MGFP 262
+G P
Sbjct: 241 LGTP 244
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 138
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR ++P VVT +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MEPEVVTRY 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +D+W++GCI E++ + +F R + DQ +++
Sbjct: 191 YRAPEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRD---------YIDQWNKVIEQ 240
Query: 259 MGFP 262
+G P
Sbjct: 241 LGTP 244
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 32/246 (13%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N+I L++VF + + D++ +++ A + LLYQ+L
Sbjct: 84 NIIGLLNVFTPQKSLEEF-------QDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
GI +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVT 188
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
+YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVI 238
Query: 257 SVMGFP 262
+G P
Sbjct: 239 EQLGTP 244
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 34 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 140
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MVPFVVTRY 192
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 193 YRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVIEQ 242
Query: 259 MGFP 262
+G P
Sbjct: 243 LGTP 246
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 32 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 138
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPEVVTRY 190
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +DIW++GCI E++ +F H DQ +++
Sbjct: 191 YRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTD---------HIDQWNKVIEQ 240
Query: 259 MGFP 262
+G P
Sbjct: 241 LGTP 244
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVVAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N+I L++VF + + D++ +++ A + LLYQ+L
Sbjct: 84 NIIGLLNVFTPQKSLEEF-------QDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
GI +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFM----MTPYVVT 188
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
+YRAPE++LG Y + +DIW++G I E++ +F H DQ +++
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTD---------HIDQWNKVI 238
Query: 257 SVMGFP 262
+G P
Sbjct: 239 EQLGTP 244
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 37 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 143
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 195
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +D+W++GCI E++ + +F R + DQ +++
Sbjct: 196 YRAPEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRD---------YIDQWNKVIEQ 245
Query: 259 MGFP 262
+G P
Sbjct: 246 LGTP 249
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 39/244 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVINLI 82
+G G G V A D R+ A+K++ + + A RE+ L++ + H N+I L+
Sbjct: 26 IGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 83 SVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+VF + V+++ + + +L +I+ LLYQ+L G
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----------LDHERMSYLLYQMLCG 132
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
I +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT +
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTSFM----MTPYVVTRY 184
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
YRAPE++LG Y + +D+W++GCI E++ + +F R + DQ +++
Sbjct: 185 YRAPEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRD---------YIDQWNKVIEQ 234
Query: 259 MGFP 262
+G P
Sbjct: 235 LGTP 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 32/246 (13%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHP 76
Y+ K +G G G V A D R+ A+K++ + + A RE+ L++ + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAY--DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N+I L++VF + + D++ +++ A + LLYQ+L
Sbjct: 84 NIIGLLNVFTPQKSLEEF-------QDVYIVMELMDANLSQVIQMELDHERMSYLLYQML 136
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
GI +LHS ++HRDLKP+NI+V + +KI D G AR + P VVT
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFM----MTPYVVT 188
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
+YRAPE++LG Y + +DIW++G I E++ +F H DQ +++
Sbjct: 189 RYYRAPEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTD---------HIDQWNKVI 238
Query: 257 SVMGFP 262
+G P
Sbjct: 239 EQLGTP 244
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 33/204 (16%)
Query: 63 ACREIALLRELKHPNVINLISVFLSHND----RKVWLLFDYAEHDLWHIIKFHRAAKANX 118
A RE+ LL+ + H N+I+L++VF + V+L+ + + +L +I
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME------- 122
Query: 119 XXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR 178
LLYQ+L GI +LHS ++HRDLKP+NI+V + +KI D G AR
Sbjct: 123 ----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLAR 174
Query: 179 LFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
+ P VVT +YRAPE++LG Y +DIW++GCI EL+ IF
Sbjct: 175 TACTNFM----MTPYVVTRYYRAPEVILGM-GYAANVDIWSVGCIMGELVKGCVIFQGTD 229
Query: 239 EDIKTSNPYHHDQLDRIFSVMGFP 262
H DQ +++ +G P
Sbjct: 230 ---------HIDQWNKVIEQLGTP 244
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 135/281 (48%), Gaps = 43/281 (15%)
Query: 9 TSNERTKVE-DLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREI 67
++ER++ E D F E G+GT+G V + K S A+K++ + RE+
Sbjct: 13 AADERSRKEMDRFQVER-MAGQGTFGTVQLGKEK--STGMSVAIKKVIQDPRFRN--REL 67
Query: 68 ALLRELK---HPNVINLISVF--LSHNDRK---VWLLFDYAEHDLWHIIK-FHRAAKANX 118
++++L HPN++ L S F L DR+ + ++ +Y L + ++R A
Sbjct: 68 QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPP 127
Query: 119 XXXXXXXXXXXSLLYQILDGIHYLH--SNWVLHRDLKPANILVMGEGIERGRVKIADMGF 176
L+Q++ I LH S V HRD+KP N+LV G +K+ D G
Sbjct: 128 PILIKV------FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV---NEADGTLKLCDFGS 178
Query: 177 ARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
A+ L P + + +YRAPEL+ G +HYT A+DIW++GCIFAE++ EPIF
Sbjct: 179 AK----KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234
Query: 237 RQEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM-PEH 276
QL I V+G P E +RK+ P H
Sbjct: 235 DNS---------AGQLHEIVRVLGCP---SREVLRKLNPSH 263
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 139/320 (43%), Gaps = 74/320 (23%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLIS 83
G +G G++G V + D + +ALK++ RE+ +++ L H N+I L+
Sbjct: 12 GKTLGTGSFGIVCEVF--DIESGKRFALKKVLQD--PRYKNRELDIMKVLDHVNIIKLVD 67
Query: 84 VFLSHNDRKV------------------------WLLFDYAEHDLWHII------KFHRA 113
F + D + ++ + +++ ++I H+
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 114 AKANXXXXXXXXXXXXSL-LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
K+ S+ +YQ+ + ++HS + HRD+KP N+LV + +K+
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD---NTLKLC 184
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D G A+ L P + + +YRAPEL+LGA YT +ID+W+IGC+F EL+ +P
Sbjct: 185 DFGSAK----KLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 233 IFHCRQEDIKTSNPYHHDQLDRIFSVMGFPLE--------------------KDWEDIRK 272
+F S DQL RI +MG P + KDW I
Sbjct: 241 LF---------SGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKI-- 289
Query: 273 MPE-HPTLLKDFNEQICKME 291
+PE P+L D EQI + E
Sbjct: 290 LPEGTPSLAIDLLEQILRYE 309
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 22 YEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINL 81
Y G + G +R N+ + + + + L REI LL HPN++ L
Sbjct: 35 YGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL 94
Query: 82 ISVFLSHND---RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+F+ + K++L+ + DL +I R + +Y IL G
Sbjct: 95 RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY--------FMYHILLG 146
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV--VVT 196
+H LH V+HRDL P NIL+ + + I D AR + AD + V
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLA----DNNDITICDFNLAR------EDTADANKTHYVTH 196
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
WYRAPEL++ + +TK +D+W+ GC+ AE+ + +F + S Y +QL++I
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF-------RGSTFY--NQLNKIV 247
Query: 257 SVMGFPLEKD 266
V+G P +D
Sbjct: 248 EVVGTPKIED 257
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 22 YEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINL 81
Y G + G +R N+ + + + + L REI LL HPN++ L
Sbjct: 35 YGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGL 94
Query: 82 ISVFLSHND---RKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+F+ + K++L+ + DL +I R + +Y IL G
Sbjct: 95 RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY--------FMYHILLG 146
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV--VVT 196
+H LH V+HRDL P NIL+ + + I D AR + AD + V
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLA----DNNDITICDFNLAR------EDTADANKTHYVTH 196
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
WYRAPEL++ + +TK +D+W+ GC+ AE+ + +F + S Y +QL++I
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF-------RGSTFY--NQLNKIV 247
Query: 257 SVMGFPLEKD 266
V+G P +D
Sbjct: 248 EVVGTPKIED 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 40/246 (16%)
Query: 4 EFKIKTSNERTKVED--LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIE 55
E K NE +K L D+E G +G+G +G+VY AR K + ALK Q+E
Sbjct: 16 ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLE 73
Query: 56 GTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKF 110
G+ RE+ + L+HPN++ L F H+ +V+L+ +YA +L + KF
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKF 131
Query: 111 HRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVK 170
A + + ++ + + Y HS V+HRD+KP N+L+ G +K
Sbjct: 132 DEQRTA-------------TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELK 174
Query: 171 IADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
IAD G++ P + D + T Y PE++ G H K +D+W++G + E L
Sbjct: 175 IADFGWSV-----HAPSSRRDDLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVG 228
Query: 231 EPIFHC 236
+P F
Sbjct: 229 KPPFEA 234
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL----SMSACREIALLRELKHPNVIN 80
C +G+G++G V K KD ++YA+K I + + RE+ LL++L HPN++
Sbjct: 28 CMLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 81 LISVFLSHNDRKVWLLFD-YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L + + +++ + Y +L+ IIK R ++ + ++ Q+ G
Sbjct: 86 LFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR----------IIKQVFSG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERG-RVKIADMGFARLFNNPLKPLADLDPVVVTF 197
I Y+H + ++HRDLKP NIL+ E E+ +KI D G + F K + + T
Sbjct: 134 ITYMHKHNIVHRDLKPENILL--ESKEKDCDIKIIDFGLSTCFQQNTK----MKDRIGTA 187
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+Y APE+L G Y + D+W+ G I LL+ P F+ + E
Sbjct: 188 YYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL----SMSACREIALLRELKHPNVIN 80
C +G+G++G V K KD ++YA+K I + + RE+ LL++L HPN++
Sbjct: 28 CMLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 81 LISVFLSHNDRKVWLLFD-YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L + + +++ + Y +L+ IIK R ++ + ++ Q+ G
Sbjct: 86 LFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVFSG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERG-RVKIADMGFARLFNNPLKPLADLDPVVVTF 197
I Y+H + ++HRDLKP NIL+ E E+ +KI D G + F K + + T
Sbjct: 134 ITYMHKHNIVHRDLKPENILL--ESKEKDCDIKIIDFGLSTCFQQNTK----MKDRIGTA 187
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+Y APE+L G Y + D+W+ G I LL+ P F+ + E
Sbjct: 188 YYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 20 FDYEGCKV--GRGTYGHVYKARRKDNSDTRDYALKQI--EGTGLSMSACREIALLRELKH 75
+D G +V G+GTYG VY R D S+ A+K+I + S EIAL + LKH
Sbjct: 21 YDENGDRVVLGKGTYGIVYAGR--DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 78
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
N++ + F + K+++ L +++ + QI
Sbjct: 79 KNIVQYLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTK------QI 131
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
L+G+ YLH N ++HRD+K N+L+ G +KI+D G + K LA ++P
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLI---NTYSGVLKISDFGTS-------KRLAGINPCTE 181
Query: 196 TF----WYRAPELL-LGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
TF Y APE++ G R Y KA DIW++GC E+ T +P F+
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 112/222 (50%), Gaps = 29/222 (13%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL----SMSACREIALLRELKHPNVIN 80
C +G+G++G V K KD ++YA+K I + + RE+ LL++L HPN++
Sbjct: 28 CMLGKGSFGEVLKC--KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 81 LISVFLSHNDRKVWLLFD-YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L + + +++ + Y +L+ IIK R ++ + ++ Q+ G
Sbjct: 86 LFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA----------RIIKQVFSG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERG-RVKIADMGFARLFNNPLKPLADLDPVVVTF 197
I Y+H + ++HRDLKP NIL+ E E+ +KI D G + F K + + T
Sbjct: 134 ITYMHKHNIVHRDLKPENILL--ESKEKDCDIKIIDFGLSTCFQQNTK----MKDRIGTA 187
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+Y APE+L G Y + D+W+ G I LL+ P F+ + E
Sbjct: 188 YYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 40/246 (16%)
Query: 4 EFKIKTSNERTKVED--LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIE 55
E K NE +K L D+E G +G+G +G+VY AR K + ALK Q+E
Sbjct: 16 ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLE 73
Query: 56 GTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKF 110
G+ RE+ + L+HPN++ L F H+ +V+L+ +YA +L + KF
Sbjct: 74 KAGVEHQLRREVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKF 131
Query: 111 HRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVK 170
A + + ++ + + Y HS V+HRD+KP N+L+ G +K
Sbjct: 132 DEQRTA-------------TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELK 174
Query: 171 IADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
IAD G++ P + + T Y PE++ G H K +D+W++G + E L
Sbjct: 175 IADFGWSV-----HAPSSRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVG 228
Query: 231 EPIFHC 236
+P F
Sbjct: 229 KPPFEA 234
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 40/246 (16%)
Query: 4 EFKIKTSNERTKVED--LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIE 55
E K NE +K L D+E G +G+G +G+VY AR K + ALK Q+E
Sbjct: 7 ELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLE 64
Query: 56 GTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKF 110
G+ RE+ + L+HPN++ L F H+ +V+L+ +YA +L + KF
Sbjct: 65 KAGVEHQLRREVEIQSHLRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKF 122
Query: 111 HRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVK 170
A + + ++ + + Y HS V+HRD+KP N+L+ G +K
Sbjct: 123 DEQRTA-------------TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELK 165
Query: 171 IADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
IAD G++ P + + T Y PE++ G H K +D+W++G + E L
Sbjct: 166 IADFGWS-----VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVG 219
Query: 231 EPIFHC 236
+P F
Sbjct: 220 KPPFEA 225
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 35/219 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA----CREIALLRELKHPNVINL 81
K+G G YG V R K R A+K I T +S S+ E+A+L+ L HPN++ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVER--AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 82 ISVFLSHNDRKVWLLFD-YAEHDLW----HIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
F + R +L+ + Y +L+ H +KF+ A ++ Q+L
Sbjct: 102 YDFF--EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA-------------VIIKQVL 146
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIER-GRVKIADMGFARLFNNPLKPLADLDPVVV 195
G+ YLH + ++HRDLKP N+L+ E E+ +KI D G + +F N K + +
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLL--ESKEKDALIKIVDFGLSAVFENQKK----MKERLG 200
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T +Y APE+L + Y + D+W+IG I LL P F
Sbjct: 201 TAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 20 FDYEGCKV--GRGTYGHVYKARRKDNSDTRDYALKQI--EGTGLSMSACREIALLRELKH 75
+D G +V G+GTYG VY R D S+ A+K+I + S EIAL + LKH
Sbjct: 7 YDENGDRVVLGKGTYGIVYAGR--DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH 64
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
N++ + F + K+++ L +++ + QI
Sbjct: 65 KNIVQYLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTK------QI 117
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
L+G+ YLH N ++HRD+K N+L+ G +KI+D G + K LA ++P
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVLI---NTYSGVLKISDFGTS-------KRLAGINPCTE 167
Query: 196 TF----WYRAPELL-LGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
TF Y APE++ G R Y KA DIW++GC E+ T +P F+
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 66 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 112
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 113 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 161
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ D + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 162 SRRDTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 115 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWSV-----HAPS 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ D + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 40/252 (15%)
Query: 18 DLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
D FD G +G+G +G+VY AR K N ALK Q+E G+ REI +
Sbjct: 15 DDFDI-GRPLGKGKFGNVYLAREKQNKFI--MALKVLFKSQLEKEGVEHQLRREIEIQSH 71
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
L+HPN++ + + F H+ ++++L+ ++A +L+ ++ H +
Sbjct: 72 LRHPNILRMYNYF--HDRKRIYLMLEFAPRGELYKELQKH---------GRFDEQRSATF 120
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
+ ++ D +HY H V+HRD+KP N+L MG +G +KIAD G++ P
Sbjct: 121 MEELADALHYCHERKVIHRDIKPENLL-MG---YKGELKIADFGWSV-----HAPSLRRR 171
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 251
+ T Y PE++ G H K +D+W G + E L P F +P H +
Sbjct: 172 XMCGTLDYLPPEMIEGKTHDEK-VDLWCAGVLCYEFLVGMPPF---------DSPSHTET 221
Query: 252 LDRIFSV-MGFP 262
RI +V + FP
Sbjct: 222 HRRIVNVDLKFP 233
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 120/252 (47%), Gaps = 40/252 (15%)
Query: 18 DLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
D FD G +G+G +G+VY AR K N ALK Q+E G+ REI +
Sbjct: 14 DDFDI-GRPLGKGKFGNVYLAREKQNKFI--MALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
L+HPN++ + + F H+ ++++L+ ++A +L+ ++ H +
Sbjct: 71 LRHPNILRMYNYF--HDRKRIYLMLEFAPRGELYKELQKH---------GRFDEQRSATF 119
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
+ ++ D +HY H V+HRD+KP N+L MG +G +KIAD G++ P
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLL-MG---YKGELKIADFGWSV-----HAPSLRRR 170
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 251
+ T Y PE++ G H K +D+W G + E L P F +P H +
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEK-VDLWCAGVLCYEFLVGMPPF---------DSPSHTET 220
Query: 252 LDRIFSV-MGFP 262
RI +V + FP
Sbjct: 221 HRRIVNVDLKFP 232
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ + P
Sbjct: 117 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS--VHAPSSRR 168
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
DL T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 169 TDL---CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ + P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIADFGWS--VHAPSSRR 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
DL T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 TDL---CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 47/259 (18%)
Query: 20 FDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTG-LSMSACREIALLRELKHP- 76
+ YE KV G+G++G V KA D+ + ALK + A EI +L L+
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 77 -----NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
NVI+++ F N + + F+ +L+ +IK ++
Sbjct: 155 KDNTMNVIHMLENFTFRNH--ICMTFELLSMNLYELIKKNK-------FQGFSLPLVRKF 205
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-----RLFNNPLKP 186
+ IL + LH N ++H DLKP NIL+ +G R +K+ D G + R++
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQG--RSGIKVIDFGSSCYEHQRVYT----- 258
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 246
+ + +YRAPE++LGAR Y ID+W++GCI AELLT P+ E
Sbjct: 259 ------XIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEG------ 305
Query: 247 YHHDQLDRIFSVMGFPLEK 265
DQL + ++G P +K
Sbjct: 306 ---DQLACMIELLGMPSQK 321
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 66 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 112
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ + P
Sbjct: 113 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS--VHAPSSRR 164
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
DL T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 165 TDL---CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ + P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS--VHAPSSRR 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
DL T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 TDL---CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 47/259 (18%)
Query: 20 FDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTG-LSMSACREIALLRELKHP- 76
+ YE KV G+G++G V KA D+ + ALK + A EI +L L+
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 77 -----NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
NVI+++ F N + + F+ +L+ +IK ++
Sbjct: 155 KDNTMNVIHMLENFTFRNH--ICMTFELLSMNLYELIKKNK-------FQGFSLPLVRKF 205
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-----RLFNNPLKP 186
+ IL + LH N ++H DLKP NIL+ +G R +K+ D G + R++
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQG--RSGIKVIDFGSSCYEHQRVYT----- 258
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 246
+ + +YRAPE++LGAR Y ID+W++GCI AELLT P+ E
Sbjct: 259 ------XIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEG------ 305
Query: 247 YHHDQLDRIFSVMGFPLEK 265
DQL + ++G P +K
Sbjct: 306 ---DQLACMIELLGMPSQK 321
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEH-----DLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA----------- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 117 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 165
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 36/256 (14%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS--------ACREI 67
VED ++ G ++G G + V K R+K ++YA K I+ LS S RE+
Sbjct: 10 VEDHYEM-GEELGSGQFAIVRKCRQKGTG--KEYAAKFIKKRRLSSSRRGVSREEIEREV 66
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
+LRE++HPN+I L +F + D V +L + +L+ + + +
Sbjct: 67 NILREIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFLAEKESLTEDEAT------- 118
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
L QILDG+HYLHS + H DLKP NI+++ + + R+K+ D G A + ++
Sbjct: 119 --QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----HKIEAG 172
Query: 188 ADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDI 241
+ + T + APE++ LG D+W+IG I LL+ F +QE +
Sbjct: 173 NEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGETKQETL 227
Query: 242 KTSNPYHHDQLDRIFS 257
+ ++D + FS
Sbjct: 228 TNISAVNYDFDEEYFS 243
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 115 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 36/258 (13%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS--------ACR 65
+ VED ++ G ++G G + V K R+K ++YA K I+ LS S R
Sbjct: 1 SMVEDHYEM-GEELGSGQFAIVRKCRQKGTG--KEYAAKFIKKRRLSSSRRGVSREEIER 57
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
E+ +LRE++HPN+I L +F + D V +L + +L+ + + +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFLAEKESLTEDEAT----- 111
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
L QILDG+HYLHS + H DLKP NI+++ + + R+K+ D G A + ++
Sbjct: 112 ----QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----HKIE 163
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ + T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGETKQE 218
Query: 240 DIKTSNPYHHDQLDRIFS 257
+ + ++D + FS
Sbjct: 219 TLTNISAVNYDFDEEYFS 236
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 117 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 165
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K++ ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ + P
Sbjct: 112 --TYITELANALSYCHSKKVIHRDIKPENLL-LGSA---GELKIADFGWS--VHAPSSRR 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
A L T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 AAL---CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 66 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 112
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 113 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----CHAPS 161
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEH-----DLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTA----------- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 117 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 165
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 47/259 (18%)
Query: 20 FDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTG-LSMSACREIALLRELKHP- 76
+ YE KV G+G +G V KA D+ + ALK + A EI +L L+
Sbjct: 97 YRYEVLKVIGKGXFGQVVKAY--DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 77 -----NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
NVI+++ F N + + F+ +L+ +IK ++
Sbjct: 155 KDNTMNVIHMLENFTFRNH--ICMTFELLSMNLYELIKKNK-------FQGFSLPLVRKF 205
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-----RLFNNPLKP 186
+ IL + LH N ++H DLKP NIL+ +G R +K+ D G + R++
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQG--RSGIKVIDFGSSCYEHQRVYX----- 258
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 246
+ + +YRAPE++LGAR Y ID+W++GCI AELLT P+ E
Sbjct: 259 ------XIQSRFYRAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEG------ 305
Query: 247 YHHDQLDRIFSVMGFPLEK 265
DQL + ++G P +K
Sbjct: 306 ---DQLACMIELLGMPXQK 321
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 160
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 160
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 116/243 (47%), Gaps = 39/243 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKHPNVINL 81
+G+G +G+VY AR K N ALK Q+E G+ REI + L+HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFI--MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ F H+ ++++L+ ++A +L+ ++ H + + ++ D +H
Sbjct: 80 YNYF--HDRKRIYLMLEFAPRGELYKELQKH---------GRFDEQRSATFMEELADALH 128
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y H V+HRD+KP N+L MG +G +KIAD G++ P + T Y
Sbjct: 129 YCHERKVIHRDIKPENLL-MG---YKGELKIADFGWSV-----HAPSLRRRXMCGTLDYL 179
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV-M 259
PE++ G H K +D+W G + E L P F +P H + RI +V +
Sbjct: 180 PPEMIEGKTHDEK-VDLWCAGVLCYEFLVGMPPF---------DSPSHTETHRRIVNVDL 229
Query: 260 GFP 262
FP
Sbjct: 230 KFP 232
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 67 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 113
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ P
Sbjct: 114 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIADFGWS-----VHAPS 162
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 163 SRRXXLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ P
Sbjct: 115 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIADFGWS-----VHAPS 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-----EIALLRELKHPNVIN 80
K+GRG + VY+A D ALK+++ L + R EI LL++L HPNVI
Sbjct: 39 KIGRGQFSEVYRAACL--LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ F+ N+ + L A DL +IK + K Q+ +
Sbjct: 97 YYASFIEDNELNIVLELADA-GDLSRMIKHFKKQK-----RLIPERTVWKYFVQLCSALE 150
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
++HS V+HRD+KPAN+ + G+ VK+ D+G R F++ L V T +Y
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGV----VKLGDLGLGRFFSSKTTAAHSL---VGTPYYM 203
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
+PE + Y DIW++GC+ E+ + F+
Sbjct: 204 SPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFY 237
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 63
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 64 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 110
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ P
Sbjct: 111 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIADFGWS-----VHAPS 159
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 115 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 SRRAALCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 68
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 69 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 115
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 116 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 164
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ + P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIADFGWS--VHAPSSRR 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
A L T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 AAL---CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 115 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 SRRXXLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 160
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 70 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 117 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 165
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE + G H K +D+W++G + E L +P F
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEK-VDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 39/231 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKHPNV 78
G +G+G +G+VY AR + + ALK Q+E G+ RE+ + L+HPN+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFI--LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 79 INLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
+ L F H+ +V+L+ +YA +L + +F A + +
Sbjct: 75 LRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-------------TYIT 119
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P + D +
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSN----GELKIADFGWS-----VHAPSSRRDTL 170
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK 242
T Y PE++ G H K +D+W++G + E L P F H QE +
Sbjct: 171 CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 65 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 111
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P
Sbjct: 112 --TYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWS-----VHAPS 160
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 161 SRRXXLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K ALK Q+E G+ RE+ +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 61
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 62 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 108
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIAD G++ P
Sbjct: 109 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIADFGWS-----VHAPS 157
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 67 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 113
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIA+ G++ P
Sbjct: 114 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIANFGWS-----VHAPS 162
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 36/259 (13%)
Query: 13 RTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS--------AC 64
++ VED ++ G ++G G + V K R+K ++YA K I+ L S
Sbjct: 21 QSMVEDHYEM-GEELGSGQFAIVRKCRQKGTG--KEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
RE+ +LRE++HPN+I L +F + D V +L + +L+ + + +
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTD-VVLILELVSGGELFDFLAEKESLTEDEAT---- 132
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
L QILDG+HYLHS + H DLKP NI+++ + + R+K+ D G A + +
Sbjct: 133 -----QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----HKI 183
Query: 185 KPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQ 238
+ + + T + APE++ LG D+W+IG I LL+ F +Q
Sbjct: 184 EAGNEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGETKQ 238
Query: 239 EDIKTSNPYHHDQLDRIFS 257
E + + ++D + FS
Sbjct: 239 ETLTNISAVNYDFDEEYFS 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 38/229 (16%)
Query: 19 LFDYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRE 72
L D+E G +G+G +G+VY AR K + ALK Q+E G+ RE+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFI--LALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXX 127
L+HPN++ L F H+ +V+L+ +YA +L + KF A
Sbjct: 68 LRHPNILRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA----------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
+ + ++ + + Y HS V+HRD+KP N+L +G G +KIA+ G++ P
Sbjct: 115 --TYITELANALSYCHSKRVIHRDIKPENLL-LGSA---GELKIANFGWS-----VHAPS 163
Query: 188 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
+ + T Y PE++ G H K +D+W++G + E L +P F
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 31/227 (13%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKH 75
Y+G +V G+G++G V KD ++ A+K Q++ S RE+ LL++L H
Sbjct: 28 YKGQRVLGKGSFGEVILC--KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 76 PNVINLISVFLSHNDRKVWLLFD--YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLL 132
PN++ L F D+ + L Y +L+ II R ++ + ++
Sbjct: 86 PNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------II 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q+L GI Y+H N ++HRDLKP N+L+ + + ++I D G + F K +
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLESKS-KDANIRIIDFGLSTHFEASKK----MKD 187
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ T +Y APE+L G Y + D+W+ G I LL+ P F+ E
Sbjct: 188 KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 26/225 (11%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA----CREIALLRELKH 75
DYE +G G+YG K RRK SD + K+++ ++ + E+ LLRELKH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRK--SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
PN++ + + ++++ +Y E DL +I K ++ Q
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQ 119
Query: 135 ILDGIHYLH-----SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
+ + H + VLHRDLKPAN+ + G + VK+ D G AR+ N+ +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNH---DTSF 172
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
V T +Y +PE + Y + DIW++GC+ EL P F
Sbjct: 173 AKTFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 26/225 (11%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA----CREIALLRELKH 75
DYE +G G+YG K RRK SD + K+++ ++ + E+ LLRELKH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRK--SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
PN++ + + ++++ +Y E DL +I K ++ Q
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQ 119
Query: 135 ILDGIHYLH-----SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
+ + H + VLHRDLKPAN+ + G + VK+ D G AR+ N+ +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNH---DTSF 172
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
V T +Y +PE + Y + DIW++GC+ EL P F
Sbjct: 173 AKAFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 31/227 (13%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKH 75
Y+G +V G+G++G V KD ++ A+K Q++ S RE+ LL++L H
Sbjct: 51 YKGQRVLGKGSFGEVILC--KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 76 PNVINLISVFLSHNDRKVWLLFD--YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLL 132
PN++ L F D+ + L Y +L+ II R ++ + ++
Sbjct: 109 PNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------II 155
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q+L GI Y+H N ++HRDLKP N+L+ + + ++I D G + F K +
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLESKS-KDANIRIIDFGLSTHFEASKK----MKD 210
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ T +Y APE+L G Y + D+W+ G I LL+ P F+ E
Sbjct: 211 KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 255
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 26/225 (11%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA----CREIALLRELKH 75
DYE +G G+YG K RRK SD + K+++ ++ + E+ LLRELKH
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRK--SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
PN++ + + ++++ +Y E DL +I K ++ Q
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI-----TKGTKERQYLDEEFVLRVMTQ 119
Query: 135 ILDGIHYLH-----SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
+ + H + VLHRDLKPAN+ + G + VK+ D G AR+ N+ +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDG----KQNVKLGDFGLARILNHDEDFAKE 175
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
V T +Y +PE + Y + DIW++GC+ EL P F
Sbjct: 176 F---VGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 31/227 (13%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKH 75
Y+G +V G+G++G V KD ++ A+K Q++ S RE+ LL++L H
Sbjct: 52 YKGQRVLGKGSFGEVILC--KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 76 PNVINLISVFLSHNDRKVWLLFD--YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLL 132
PN++ L F D+ + L Y +L+ II R ++ + ++
Sbjct: 110 PNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------II 156
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q+L GI Y+H N ++HRDLKP N+L+ + + ++I D G + F K +
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLESKS-KDANIRIIDFGLSTHFEASKK----MKD 211
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ T +Y APE+L G Y + D+W+ G I LL+ P F+ E
Sbjct: 212 KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 256
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 111/227 (48%), Gaps = 31/227 (13%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKH 75
Y+G +V G+G++G V KD ++ A+K Q++ S RE+ LL++L H
Sbjct: 34 YKGQRVLGKGSFGEVILC--KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 76 PNVINLISVFLSHNDRKVWLLFD--YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLL 132
PN++ L F D+ + L Y +L+ II R ++ + ++
Sbjct: 92 PNIMKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA----------RII 138
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q+L GI Y+H N ++HRDLKP N+L+ + + ++I D G + F K +
Sbjct: 139 RQVLSGITYMHKNKIVHRDLKPENLLLESKS-KDANIRIIDFGLSTHFEASKK----MKD 193
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ T +Y APE+L G Y + D+W+ G I LL+ P F+ E
Sbjct: 194 KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 238
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKHPNV 78
G +G+G +G+VY AR + + ALK Q+E G+ RE+ + L+HPN+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFI--LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 79 INLISVFLSHNDRKVWLLFDYAE-----HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
+ L F H+ +V+L+ +YA +L + +F A + +
Sbjct: 75 LRLYGYF--HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-------------TYIT 119
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
++ + + Y HS V+HRD+KP N+L+ G +KIAD G++ P + +
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSN----GELKIADFGWS-----VHAPSSRRTTL 170
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK 242
T Y PE++ G H K +D+W++G + E L P F H QE +
Sbjct: 171 CGTLDYLPPEMIEGRMHDEK-VDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 48/243 (19%)
Query: 10 SNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIAL 69
+ R + D F+ E ++GRG VY+ ++K + YALK ++ T EI +
Sbjct: 45 GSNRDALSDFFEVES-ELGRGATSIVYRCKQKGTQ--KPYALKVLKKTVDKKIVRTEIGV 101
Query: 70 LRELKHPNVINLISVFLSHNDRKVWL-------LFD-------YAEHDLWHIIKFHRAAK 115
L L HPN+I L +F + + + L LFD Y+E D +K
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK------ 155
Query: 116 ANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMG 175
QIL+ + YLH N ++HRDLKP N+L + +KIAD G
Sbjct: 156 ------------------QILEAVAYLHENGIVHRDLKPENLLYATPAPD-APLKIADFG 196
Query: 176 FARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIF 234
+++ + + + V T Y APE+L G Y +D+W++G I LL EP +
Sbjct: 197 LSKIVEHQVL----MKTVCGTPGYCAPEILRGC-AYGPEVDMWSVGIITYILLCGFEPFY 251
Query: 235 HCR 237
R
Sbjct: 252 DER 254
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 46/230 (20%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS---------------ACREIALL 70
K+G G YG V + K+ + A+K I+ + EI+LL
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEK--AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 71 RELKHPNVINLISVFLSHNDRKVWLLFD--YAEHDLWHII----KFHRAAKANXXXXXXX 124
+ L HPN+I L VF D+K + L Y +L+ I KF AN
Sbjct: 101 KSLDHPNIIKLFDVF---EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN------- 150
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
++ QIL GI YLH + ++HRD+KP NIL+ + +KI D G + F+
Sbjct: 151 ------IMKQILSGICYLHKHNIVHRDIKPENILLENKN-SLLNIKIVDFGLSSFFSKDY 203
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
K L + T +Y APE+L + Y + D+W+ G I LL P F
Sbjct: 204 K----LRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 45/236 (19%)
Query: 21 DYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-REIALLRELKHPNV 78
D+E V G+G +G V KAR + D+R YA+K+I T +S E+ LL L H V
Sbjct: 7 DFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 79 INLISVFLSHND-----------RKVWLLFDYAE----HDLWHIIKFHRAAKANXXXXXX 123
+ + +L + +++ +Y E +DL H ++
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ---------- 114
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
L QIL+ + Y+HS ++HRDLKP NI + E VKI D G A+ +
Sbjct: 115 -RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID----ESRNVKIGDFGLAKNVHRS 169
Query: 184 LKPLA-----------DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
L L +L + T Y A E+L G HY + ID++++G IF E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 45/236 (19%)
Query: 21 DYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-REIALLRELKHPNV 78
D+E V G+G +G V KAR + D+R YA+K+I T +S E+ LL L H V
Sbjct: 7 DFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 79 INLISVFLSHND-----------RKVWLLFDYAE----HDLWHIIKFHRAAKANXXXXXX 123
+ + +L + +++ +Y E +DL H ++
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE------- 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
L QIL+ + Y+HS ++HRDLKP NI + E VKI D G A+ +
Sbjct: 118 ----YWRLFRQILEALSYIHSQGIIHRDLKPMNIFID----ESRNVKIGDFGLAKNVHRS 169
Query: 184 LKPLA-----------DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
L L +L + T Y A E+L G HY + ID++++G IF E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS----ACREIALLRELKHPNVINL 81
K+G G++G K D R Y +K+I + +S + RE+A+L +KHPN++
Sbjct: 31 KIGEGSFGKAILV--KSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
F + ++++ DY E DL+ I + QI +
Sbjct: 89 RESF--EENGSLYIVMDYCEGGDLFKRINAQKGV-------LFQEDQILDWFVQICLALK 139
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
++H +LHRD+K NI + +G V++ D G AR+ N+ ++ LA + T +Y
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGT----VQLGDFGIARVLNSTVE-LAR--ACIGTPYYL 192
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+PE+ + Y DIWA+GC+ EL T
Sbjct: 193 SPEICEN-KPYNNKSDIWALGCVLYELCT 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR R+ A+K I+ T L+ ++ RE+ +++ L HPN++ L
Sbjct: 23 IGKGNFAKVKLARHVLTG--REVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 81 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR---------AKFRQIVSAVQY 129
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H +++HRDLK N+L+ G+ +KIAD GF+ F K LD + Y A
Sbjct: 130 CHQKYIVHRDLKAENLLLDGD----MNIKIADFGFSNEFTVGNK----LDTFCGSPPYAA 181
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
PEL G ++ +D+W++G I L++ F
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-----CREIALLRELKHPNVIN 80
++G G++G VY AR NS+ A+K++ +G + +E+ L++L+HPN I
Sbjct: 61 EIGHGSFGAVYFARDVRNSEV--VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+L + WL+ +Y +++ H+ ++ + L G+
Sbjct: 119 YRGCYL--REHTAWLVMEYCLGSASDLLEVHKKP--------LQEVEIAAVTHGALQGLA 168
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLHS+ ++HRD+K NIL+ E G VK+ D G A + +A + V T ++
Sbjct: 169 YLHSHNMIHRDVKAGNILLS----EPGLVKLGDFGSASI-------MAPANXFVGTPYWM 217
Query: 201 APELLLGA--RHYTKAIDIWAIGCIFAELLTSEP 232
APE++L Y +D+W++G EL +P
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGVFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 17 EDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHP 76
ED ++ G ++G G +G VYKA+ K+ S + + EI +L HP
Sbjct: 36 EDFWEIIG-ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY--- 133
N++ L+ F Y E++LW +I+F + S +
Sbjct: 95 NIVKLLDAF-------------YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 134 -QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q LD ++YLH N ++HRDLK NIL + G +K+AD G + + + D
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLD----GDIKLADFGVSA---KNTRTIQRRDS 194
Query: 193 VVVTFWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTSEPIFH 235
+ T ++ APE+++ R Y D+W++G E+ EP H
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 30/214 (14%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-----CREIALLRELKHPNVIN 80
++G G++G VY AR NS+ A+K++ +G + +E+ L++L+HPN I
Sbjct: 22 EIGHGSFGAVYFARDVRNSEV--VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+L + WL+ +Y +++ H+ ++ + L G+
Sbjct: 80 YRGCYL--REHTAWLVMEYCLGSASDLLEVHKKP--------LQEVEIAAVTHGALQGLA 129
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLHS+ ++HRD+K NIL+ E G VK+ D G A + +A + V T ++
Sbjct: 130 YLHSHNMIHRDVKAGNILLS----EPGLVKLGDFGSASI-------MAPANXFVGTPYWM 178
Query: 201 APELLLGA--RHYTKAIDIWAIGCIFAELLTSEP 232
APE++L Y +D+W++G EL +P
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 8 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 117 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 175 ------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQE 223
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 224 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 254
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSD---TRDYALKQIEGTGLSMSACREIALLRE 72
+ D++D+ +G G + V A K + A K +EG SM EIA+L +
Sbjct: 16 IRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHK 72
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIK--FHRAAKANXXXXXXXXXXXXS 130
+KHPN++ L ++ S + + I++ F+ A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------------R 120
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
L++Q+LD + YLH ++HRDLKP N+L E ++ I+D G +++ + P + L
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMED----PGSVL 175
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L + Y+KA+D W+IG I LL P F+
Sbjct: 176 STACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGKFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 8 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 116
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 117 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 175 ------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQE 223
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 224 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 254
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTD-VILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPAFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 17 EDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHP 76
ED ++ G ++G G +G VYKA+ K+ S + + EI +L HP
Sbjct: 36 EDFWEIIG-ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY--- 133
N++ L+ F Y E++LW +I+F + S +
Sbjct: 95 NIVKLLDAF-------------YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 134 -QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q LD ++YLH N ++HRDLK NIL + G +K+AD G + + + D
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLD----GDIKLADFGVSA---KNTRXIQRRDS 194
Query: 193 VVVTFWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTSEPIFH 235
+ T ++ APE+++ R Y D+W++G E+ EP H
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLEA-----DMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 43/274 (15%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYDT-GEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
++L+E++HPNVI L V+ + D + +L A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDV-ILILELVAGGELFDFL----AEKESLTEEEAT--- 117
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLK 185
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N K
Sbjct: 118 --EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 186 PLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQE 239
+ T + APE++ LG D+W+IG I LL+ F +QE
Sbjct: 176 ------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQE 224
Query: 240 DIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
+ + +++ D FS L KD+ IR++
Sbjct: 225 TLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 29/227 (12%)
Query: 17 EDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHP 76
ED ++ G ++G G +G VYKA+ K+ S + + EI +L HP
Sbjct: 36 EDFWEIIG-ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY--- 133
N++ L+ F Y E++LW +I+F + S +
Sbjct: 95 NIVKLLDAF-------------YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 134 -QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q LD ++YLH N ++HRDLK NIL + G +K+AD G + + + D
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLD----GDIKLADFGVSA---KNTRXIQRRDX 194
Query: 193 VVVTFWYRAPELLLGA----RHYTKAIDIWAIGCIFAELLTSEPIFH 235
+ T ++ APE+++ R Y D+W++G E+ EP H
Sbjct: 195 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 31/227 (13%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELKH 75
Y+G +V G+G++G V KD ++ A+K Q++ S RE+ LL++L H
Sbjct: 28 YKGQRVLGKGSFGEVILC--KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 76 PNVINLISVFLSHNDRKVWLLFD--YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLL 132
PN+ L F D+ + L Y +L+ II R ++ + ++
Sbjct: 86 PNIXKLYEFF---EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR----------II 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
Q+L GI Y H N ++HRDLKP N+L+ + + ++I D G + F K
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLESKS-KDANIRIIDFGLSTHFEASKK----XKD 187
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
+ T +Y APE+L G Y + D+W+ G I LL+ P F+ E
Sbjct: 188 KIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 232
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 12 ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYA---LKQIEGTGLSMSACRE-- 66
++ KVED +D G ++G G + V K R K S +YA +K+ + CRE
Sbjct: 6 KQQKVEDFYDI-GEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 67 ---IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX 123
+++LR++ HPN+I L V+ + D V +L + +L+ + A K +
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
S + QILDG++YLH+ + H DLKP NI+++ + I +K+ D G A +
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HE 168
Query: 184 LKPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCR 237
++ + + T + APE++ LG D+W+IG I LL+ F +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTK 223
Query: 238 QEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
QE + +D + FS L KD+ IRK+
Sbjct: 224 QETLANITAVSYDFDEEFFSQTS-ELAKDF--IRKL 256
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 34/238 (14%)
Query: 26 KVGRGTYGHVYKARR-KDNSDTRDYALKQIEGTGLSMSACREIALLRELKH-PNVINLIS 83
K+GRG Y V++A +N LK ++ + REI +L L+ PN+I L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK----REIKILENLRGGPNIITLAD 99
Query: 84 VFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
+ R L+F++ + +Y+IL + Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
S ++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PE
Sbjct: 149 SMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPE 201
Query: 204 LLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
LL+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSD---TRDYALKQIEGTGLSMSACREIALLRE 72
+ D++D+ +G G + V A K + A + +EG SM EIA+L +
Sbjct: 16 IRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHK 72
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIK--FHRAAKANXXXXXXXXXXXXS 130
+KHPN++ L ++ S + + I++ F+ A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------------R 120
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
L++Q+LD + YLH ++HRDLKP N+L E ++ I+D G +++ + P + L
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMED----PGSVL 175
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L + Y+KA+D W+IG I LL P F+
Sbjct: 176 STACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 45/275 (16%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC-REI 67
V+D +D G ++G G + V K R K S YA K I+ G+S RE+
Sbjct: 9 VDDYYD-TGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 68 ALLRELKHPNVINLISVFLSHNDRKVWLLFD-YAEHDLWHIIKFHRAAKANXXXXXXXXX 126
++L+E++HPNVI L V+ + D V L+ + A +L+ + A K +
Sbjct: 66 SILKEIQHPNVITLHEVYENKTD--VILIGELVAGGELFDFL----AEKESLTEEEAT-- 117
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPL 184
L QIL+G++YLHS + H DLKP NI+++ + + R+KI D G A F N
Sbjct: 118 ---EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 185 KPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQ 238
K + T + APE++ LG D+W+IG I LL+ F +Q
Sbjct: 175 K------NIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTKQ 223
Query: 239 EDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
E + + +++ D FS L KD+ IR++
Sbjct: 224 ETLANVSAVNYEFEDEYFSNTS-ALAKDF--IRRL 255
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSD---TRDYALKQIEGTGLSMSACREIALLRE 72
+ D++D+ +G G + V A K + A + +EG SM EIA+L +
Sbjct: 16 IRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHK 72
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIK--FHRAAKANXXXXXXXXXXXXS 130
+KHPN++ L ++ S + + I++ F+ A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------------R 120
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
L++Q+LD + YLH ++HRDLKP N+L E ++ I+D G +++ + P + L
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMED----PGSVL 175
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L + Y+KA+D W+IG I LL P F+
Sbjct: 176 STACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 26/225 (11%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSD---TRDYALKQIEGTGLSMSACREIALLRE 72
+ D++D+ +G G + V A K + A + +EG SM EIA+L +
Sbjct: 16 IRDIYDFRDV-LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHK 72
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIK--FHRAAKANXXXXXXXXXXXXS 130
+KHPN++ L ++ S + + I++ F+ A+
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS------------R 120
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
L++Q+LD + YLH ++HRDLKP N+L E ++ I+D G +++ + P + L
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMED----PGSVL 175
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L + Y+KA+D W+IG I LL P F+
Sbjct: 176 STACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A+K I+ T L+ S+ RE+ +++ L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTG--KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 80 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR---------AKFRQIVSAVQY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTFGNKLDAFCGAPP------Y 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 114/242 (47%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L + PN++
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--MGGPNIV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 138
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 191
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 242
Query: 259 MG 260
+G
Sbjct: 243 LG 244
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A+K I+ T L+ S+ RE+ +++ L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTG--KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 80 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR---------AKFRQIVSAVQY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTFGNKLDTFCGSPP------Y 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR R+ A+K I+ T L+ ++ RE+ +++ L HPN++ L
Sbjct: 20 IGKGNFAKVKLARHILTG--REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K S QI+ + Y
Sbjct: 78 EVI--ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR---------SKFRQIVSAVQY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H ++HRDLK N+L+ + +KIAD GF+ F K LD + Y A
Sbjct: 127 CHQKRIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTVGGK----LDTFCGSPPYAA 178
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
PEL G ++ +D+W++G I L++ F
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A+K I+ T L+ S+ RE+ +++ L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTG--KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 80 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR---------AKFRQIVSAVQY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTFGNKLDTFCGSPP------Y 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 30 GTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFLSHN 89
G +G VYKA+ K+ S + + EI +L HPN++ L+ F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF---- 76
Query: 90 DRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY----QILDGIHYLHSN 145
Y E++LW +I+F + S + Q LD ++YLH N
Sbjct: 77 ---------YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 127
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRDLK NIL + G +K+AD G + N + D + T ++ APE++
Sbjct: 128 KIIHRDLKAGNILFTLD----GDIKLADFGVSA--KNTRTXIQRRDSFIGTPYWMAPEVV 181
Query: 206 LGA----RHYTKAIDIWAIGCIFAELLTSEPIFH 235
+ R Y D+W++G E+ EP H
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 37 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 95 VKLYFTF--QDDEKLYFGLSYAKNGC--LLKYIRKIGSFDETCTRFYTA------EIVSA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 145 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANSFVGTAQ 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + +K+ D+WA+GCI +L+ P F E
Sbjct: 200 YVSPELLT-EKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNIV 90
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 91 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 139
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 192
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 243
Query: 259 MG 260
+G
Sbjct: 244 LG 245
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNIV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 138
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 191
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 242
Query: 259 MG 260
+G
Sbjct: 243 LG 244
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNIV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 138
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 191
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 242
Query: 259 MG 260
+G
Sbjct: 243 LG 244
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 34 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNIV 91
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 92 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 140
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 141 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 193
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 244
Query: 259 MG 260
+G
Sbjct: 245 LG 246
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNIV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 138
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 191
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 242
Query: 259 MG 260
+G
Sbjct: 243 LG 244
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNIV 90
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 91 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 139
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 192
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 243
Query: 259 MG 260
+G
Sbjct: 244 LG 245
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNIV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 138
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 191
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 242
Query: 259 MG 260
+G
Sbjct: 243 LG 244
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNIV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 90 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 138
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 191
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 242
Query: 259 MG 260
+G
Sbjct: 243 LG 244
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 45/236 (19%)
Query: 21 DYEGCKV-GRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-REIALLRELKHPNV 78
D+E V G+G +G V KAR + D+R YA+K+I T +S E+ LL L H V
Sbjct: 7 DFEEIAVLGQGAFGQVVKAR--NALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 79 INLISVFLSHND--------RKVWLLF---DYAE----HDLWHIIKFHRAAKANXXXXXX 123
+ + +L + +K LF +Y E +DL H ++
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ---------- 114
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
L QIL+ + Y+HS ++HR+LKP NI + E VKI D G A+ +
Sbjct: 115 -RDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFID----ESRNVKIGDFGLAKNVHRS 169
Query: 184 LKPLA-----------DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
L L +L + T Y A E+L G HY + ID +++G IF E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 31/242 (12%)
Query: 21 DYEGC-KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
DYE KVGRG Y V++ +N++ + + + + L PN++
Sbjct: 53 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNIV 110
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L+ + + + L+F+Y + + ++ +Y++L +
Sbjct: 111 KLLDIVRDQHSKTPSLIFEYVNNTDFKVL-----------YPTLTDYDIRYYIYELLKAL 159
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y HS ++HRD+KP N+++ E ++++ D G A ++ P + + V + ++
Sbjct: 160 DYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYH----PGKEYNVRVASRYF 212
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
+ PELL+ + Y ++D+W++GC+FA ++ EP F+ +HDQL +I V
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHD---------NHDQLVKIAKV 263
Query: 259 MG 260
+G
Sbjct: 264 LG 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR R+ A+K I+ T L+ ++ RE+ +++ L HPN++ L
Sbjct: 23 IGKGNFAKVKLARHILTG--REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K S QI+ + Y
Sbjct: 81 EVI--ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR---------SKFRQIVSAVQY 129
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
H ++HRDLK N+L+ + +KIAD GF+ F K LD Y A
Sbjct: 130 CHQKRIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTVGGK----LDAFCGAPPYAA 181
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
PEL G ++ +D+W++G I L++ F
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 35 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 93 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 143 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANAFVGTAQ 197
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 198 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 37 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 95 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 145 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 241
Y +PELL + K+ D+WA+GCI +L+ P F E +
Sbjct: 200 YVSPELLT-EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 34 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 92 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 141
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 142 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANSFVGTAQ 196
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 197 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 23/223 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 37 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 95 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 145 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 241
Y +PELL + K+ D+WA+GCI +L+ P F E +
Sbjct: 200 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A++ I+ T L+ S+ RE+ +++ L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTG--KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 80 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR---------AKFRQIVSAVQY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTFGNKLDTFCGSPP------Y 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A+K I+ T L+ S+ RE+ + + L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTG--KEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 80 EVI--ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR---------AKFRQIVSAVQY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD----XNIKIADFGFSNEFTFGNKLDAFCGAPP------Y 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 38 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 96 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 145
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 146 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANSFVGTAQ 200
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 201 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A++ I+ T L+ S+ RE+ +++ L HPN++ L
Sbjct: 22 IGKGNFAKVKLARHILTG--KEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 80 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR---------AKFRQIVSAVQY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTFGNKLDEFCGSPP------Y 178
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 14 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 72 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 121
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 122 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 176
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 177 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 13 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 71 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 120
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 121 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 175
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 176 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 30/215 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC----REIALLRELKHPNVINLI 82
+G+G + V AR ++ A+K I+ T L+ S+ RE+ +++ L HPN++ L
Sbjct: 15 IGKGNFAKVKLARHILTG--KEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V ++ ++L+ +YA +++ + H K + QI+ + Y
Sbjct: 73 EVI--ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR---------AKFRQIVSAVQY 121
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWY 199
H +++HRDLK N+L+ + +KIAD GF+ F N L P Y
Sbjct: 122 CHQKFIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTFGNKLDTFCGSPP------Y 171
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APEL G ++ +D+W++G I L++ F
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 12 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 70 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 119
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 120 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 174
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 175 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 12 ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC 64
++ KVED +D G ++G G + V K R K S +YA K I+ G+S
Sbjct: 6 KQQKVEDFYDI-GEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 65 -REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX 123
RE+++LR++ H NVI L V+ + D V +L + +L+ + A K +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
S + QILDG++YLH+ + H DLKP NI+++ + I +K+ D G A +
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HE 168
Query: 184 LKPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCR 237
++ + + T + APE++ LG D+W+IG I LL+ F +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTK 223
Query: 238 QEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
QE + +D + FS L KD+ IRK+
Sbjct: 224 QETLANITAVSYDFDEEFFSQTS-ELAKDF--IRKL 256
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 37 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 95 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 145 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 200 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 15 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 73 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 122
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 123 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 177
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 178 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 35 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 93 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 143 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 197
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 198 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 34 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 92 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 141
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 142 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 196
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 197 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 19 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 77 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 126
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 127 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 181
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 182 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 37 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 95 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 145 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 200 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 35 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 93 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 143 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 197
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 198 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 38 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 96 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 145
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 146 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 200
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 201 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL---SMSACREIALLRE 72
++ +F+++ +G G + V A K + + +A+K I L S EIA+LR+
Sbjct: 20 IKKIFEFKET-LGTGAFSEVVLAEEK--ATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIK--FHRAAKANXXXXXXXXXXXXS 130
+KH N++ L ++ S N + + I++ F+ A+ +
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS------------T 124
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD- 189
L+ Q+LD ++YLH ++HRDLKP N+L + E ++ I+D G +++ D
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD-EESKIMISDFGLSKMEGK-----GDV 178
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
+ T Y APE +L + Y+KA+D W+IG I LL P F+
Sbjct: 179 MSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 223
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 37 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 95 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 145 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 199
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 200 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 40 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 98 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 147
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 148 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 202
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 203 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 49/230 (21%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL--SMSACREIALLRELKHPNVINLISV 84
+G G + V+ +++ + +ALK I+ + S EIA+L+++KH N++ L +
Sbjct: 17 LGSGAFSEVFLVKQRLTG--KLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 85 FLSHNDRKVWL-------LFD-------YAEHDLWHIIKFHRAAKANXXXXXXXXXXXXS 130
+ S + + LFD Y E D +I+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ--------------------- 113
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
Q+L + YLH N ++HRDLKP N+L + E ++ I D G +++ N + A
Sbjct: 114 ---QVLSAVKYLHENGIVHRDLKPENLLYLTPE-ENSKIMITDFGLSKMEQNGIMSTACG 169
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
P Y APE +L + Y+KA+D W+IG I LL P F+ E
Sbjct: 170 TP-----GYVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ V AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 42 GKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 100 VKLYFCF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 149
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 150 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 204
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 205 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 12 ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC 64
++ KVED +D G ++G G + V K R K S +YA K I+ G+S
Sbjct: 6 KQQKVEDFYDI-GEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 65 -REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX 123
RE+++LR++ H NVI L V+ + D V +L + +L+ + A K +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
S + QILDG++YLH+ + H DLKP NI+++ + I +K+ D G A +
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HE 168
Query: 184 LKPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCR 237
++ + + T + APE++ LG D+W+IG I LL+ F +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTK 223
Query: 238 QEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
QE + +D + FS L KD+ IRK+
Sbjct: 224 QETLANITAVSYDFDEEFFSQTS-ELAKDF--IRKL 256
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 12 ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC 64
++ KVED +D G ++G G + V K R K S +YA K I+ G+S
Sbjct: 6 KQQKVEDFYDI-GEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 65 -REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX 123
RE+++LR++ H NVI L V+ + D V +L + +L+ + A K +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
S + QILDG++YLH+ + H DLKP NI+++ + I +K+ D G A +
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HE 168
Query: 184 LKPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCR 237
++ + + T + APE++ LG D+W+IG I LL+ F +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTK 223
Query: 238 QEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
QE + +D + FS L KD+ IRK+
Sbjct: 224 QETLANITSVSYDFDEEFFSHTS-ELAKDF--IRKL 256
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 12 ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC 64
++ KVED +D G ++G G + V K R K S +YA K I+ G+S
Sbjct: 6 KQQKVEDFYDI-GEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 65 -REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX 123
RE+++LR++ H NVI L V+ + D V +L + +L+ + A K +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
S + QILDG++YLH+ + H DLKP NI+++ + I +K+ D G A +
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HE 168
Query: 184 LKPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCR 237
++ + + T + APE++ LG D+W+IG I LL+ F +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTK 223
Query: 238 QEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
QE + +D + FS L KD+ IRK+
Sbjct: 224 QETLANITSVSYDFDEEFFSHTS-ELAKDF--IRKL 256
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 25/212 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLIS 83
K+G+G G VY A D + ++ A++Q ++ EI ++RE K+PN++N +
Sbjct: 27 KIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 84 VFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+L ++ +W++ +Y A L ++ ++ + L + +L
Sbjct: 85 SYLVGDE--LWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRECLQALEFL 132
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HSN V+HRD+K NIL+ G++ G VK+ D GF +++ V T ++ AP
Sbjct: 133 HSNQVIHRDIKSDNILL---GMD-GSVKLTDFGFCAQITPEQSKRSEM---VGTPYWMAP 185
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E++ + Y +DIW++G + E++ EP +
Sbjct: 186 EVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-----CREIALLRELKHPNVIN 80
K+G G YG V + K R A+K I+ + ++ ++ E+A+L++L HPN++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAER--AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 81 LISVFLSHNDRKVWLLFD-YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F + R +L+ + Y +L+ II + ++ + ++ Q+L G
Sbjct: 69 LYEFF--EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSG 116
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
YLH + ++HRDLKP N+L+ + + +KI D G + F K + + T +
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRD-ALIKIVDFGLSAHFEVGGK----MKERLGTAY 171
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y APE+L + Y + D+W+ G I LL P F
Sbjct: 172 YIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 12 ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGT-------GLSMSAC 64
++ KVED +D G ++G G + V K R K S +YA K I+ G+S
Sbjct: 6 KQQKVEDFYDI-GEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEI 62
Query: 65 -REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX 123
RE+++LR++ H NVI L V+ + D V +L + +L+ + A K +
Sbjct: 63 EREVSILRQVLHHNVITLHDVYENRTD-VVLILELVSGGELFDFL----AQKESLSEEEA 117
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
S + QILDG++YLH+ + H DLKP NI+++ + I +K+ D G A +
Sbjct: 118 T-----SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HE 168
Query: 184 LKPLADLDPVVVTFWYRAPELL----LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCR 237
++ + + T + APE++ LG D+W+IG I LL+ F +
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLE-----ADMWSIGVITYILLSGASPFLGDTK 223
Query: 238 QEDIKTSNPYHHDQLDRIFSVMGFPLEKDWEDIRKM 273
QE + +D + FS L KD+ IRK+
Sbjct: 224 QETLANITSVSYDFDEEFFSHTS-ELAKDF--IRKL 256
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELKHPNV 78
G +G G++ AR + + +R+YA+K +E + RE ++ L HP
Sbjct: 35 GKILGEGSFSTTVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ L F +D K++ YA++ ++K+ R + +I+
Sbjct: 93 VKLYFTF--QDDEKLYFGLSYAKNG--ELLKYIRKIGSFDETCTRFYTA------EIVSA 142
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH ++HRDLKP NIL+ E ++I D G A++ +P A + V T
Sbjct: 143 LEYLHGKGIIHRDLKPENILLN----EDMHIQITDFGTAKVL-SPESKQARANXFVGTAQ 197
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y +PELL + K+ D+WA+GCI +L+ P F E
Sbjct: 198 YVSPELLT-EKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 26/221 (11%)
Query: 17 EDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHP 76
E++FD K+G G+YG VYKA K+ A+KQ+ +EI+++++ P
Sbjct: 28 EEVFDVLE-KLGEGSYGSVYKAIHKETGQI--VAIKQVPVESDLQEIIKEISIMQQCDSP 84
Query: 77 NVINLISVFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
+V+ + + D +W++ +Y + II+ ++L
Sbjct: 85 HVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIIRLRNKT--------LTEDEIATILQST 134
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
L G+ YLH +HRD+K NIL+ E G K+AD G A + +A + V+
Sbjct: 135 LKGLEYLHFMRKIHRDIKAGNILLNTE----GHAKLADFGVAGQLTD---XMAKRNXVIG 187
Query: 196 TFWYRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T ++ APE++ +G Y DIW++G E+ +P +
Sbjct: 188 TPFWMAPEVIQEIG---YNCVADIWSLGITAIEMAEGKPPY 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLIS 83
K+G+G G VY A D + ++ A++Q ++ EI ++RE K+PN++N +
Sbjct: 27 KIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 84 VFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+L ++ +W++ +Y A L ++ ++ + L + +L
Sbjct: 85 SYLVGDE--LWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRECLQALEFL 132
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HSN V+HRD+K NIL+ G++ G VK+ D GF + +V T ++ AP
Sbjct: 133 HSNQVIHRDIKSDNILL---GMD-GSVKLTDFGFCAQIT---PEQSKRSTMVGTPYWMAP 185
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E++ + Y +DIW++G + E++ EP +
Sbjct: 186 EVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLI 82
K+G+G++G V+K DN + A+K I+ +EI +L + P V
Sbjct: 34 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 83 SVFLSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+L D K+W++ +Y + DL A ++L +IL G
Sbjct: 92 GSYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------------TILREILKG 136
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLADLDPVVVTF 197
+ YLHS +HRD+K AN+L+ E G VK+AD G A +L + +K + V T
Sbjct: 137 LDYLHSEKKIHRDIKAANVLLS----EHGEVKLADFGVAGQLTDTQIK----RNTFVGTP 188
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
++ APE++ + + +KA DIW++G EL EP
Sbjct: 189 FWMAPEVIKQSAYDSKA-DIWSLGITAIELARGEP 222
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + + ++ +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNNTDFKQLR-----------QTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-----EIALLRELKHPNVIN 80
K+G G YG V + K R A+K I+ + ++ ++ E+A+L++L HPN++
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAER--AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 81 LISVFLSHNDRKVWLLFD-YAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F + R +L+ + Y +L+ II + ++ + ++ Q+L G
Sbjct: 86 LYEFF--EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----------IMKQVLSG 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
YLH + ++HRDLKP N+L+ + + +KI D G + F K + + T +
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRD-ALIKIVDFGLSAHFEVGGK----MKERLGTAY 188
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y APE+L + Y + D+W+ G I LL P F
Sbjct: 189 YIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLIS 83
K+G+G G VY A D + ++ A++Q ++ EI ++RE K+PN++N +
Sbjct: 27 KIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 84 VFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+L ++ +W++ +Y A L ++ ++ + L + +L
Sbjct: 85 SYLVGDE--LWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRECLQALEFL 132
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HSN V+HRD+K NIL+ G++ G VK+ D GF + + V T ++ AP
Sbjct: 133 HSNQVIHRDIKSDNILL---GMD-GSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAP 185
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E++ + Y +DIW++G + E++ EP +
Sbjct: 186 EVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLIS 83
K+G+G G VY A D + ++ A++Q ++ EI ++RE K+PN++N +
Sbjct: 28 KIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 84 VFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+L ++ +W++ +Y A L ++ ++ + L + +L
Sbjct: 86 SYLVGDE--LWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRECLQALEFL 133
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HSN V+HRD+K NIL+ G++ G VK+ D GF + + V T ++ AP
Sbjct: 134 HSNQVIHRDIKSDNILL---GMD-GSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAP 186
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E++ + Y +DIW++G + E++ EP +
Sbjct: 187 EVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLI 82
K+G+G++G V+K DN + A+K I+ +EI +L + P V
Sbjct: 14 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 83 SVFLSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+L D K+W++ +Y + DL A ++L +IL G
Sbjct: 72 GSYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------------TILREILKG 116
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLADLDPVVVTF 197
+ YLHS +HRD+K AN+L+ E G VK+AD G A +L + +K + V T
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLS----EHGEVKLADFGVAGQLTDTQIK----RNTFVGTP 168
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
++ APE++ + + +KA DIW++G EL EP
Sbjct: 169 FWMAPEVIKQSAYDSKA-DIWSLGITAIELARGEP 202
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 43 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 100
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 101 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 149
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 150 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 202
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 249
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLI 82
K+G+G++G V+K DN + A+K I+ +EI +L + P V
Sbjct: 29 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 83 SVFLSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+L D K+W++ +Y + DL A ++L +IL G
Sbjct: 87 GSYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------------TILREILKG 131
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLADLDPVVVTF 197
+ YLHS +HRD+K AN+L+ E G VK+AD G A +L + +K + V T
Sbjct: 132 LDYLHSEKKIHRDIKAANVLLS----EHGEVKLADFGVAGQLTDTQIK----RNXFVGTP 183
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
++ APE++ + + +KA DIW++G EL EP
Sbjct: 184 FWMAPEVIKQSAYDSKA-DIWSLGITAIELARGEP 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 53/263 (20%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-----------------C---- 64
++G+G+YG V K +N +T YA+K + L A C
Sbjct: 20 EIGKGSYG-VVKLAYNENDNTY-YAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPR 77
Query: 65 -------REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKAN 117
+EIA+L++L HPNV+ L+ V N+ ++++F+ + + +
Sbjct: 78 GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 118 XXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA 177
++ GI YLH ++HRD+KP+N+LV E G +KIAD G +
Sbjct: 138 QARFY---------FQDLIKGIEYLHYQKIIHRDIKPSNLLVG----EDGHIKIADFGVS 184
Query: 178 RLFNNPLKPLADLDPVVVTFWYRAPELLLGARHY--TKAIDIWAIGC-----IFAELLTS 230
F L++ V T + APE L R KA+D+WA+G +F +
Sbjct: 185 NEFKGSDALLSN---TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM 241
Query: 231 EPIFHCRQEDIKTSNPYHHDQLD 253
+ C IK+ DQ D
Sbjct: 242 DERIMCLHSKIKSQALEFPDQPD 264
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKD----------NSDTRDYALKQIEGTGLSMSACR 65
++DLF ++ K+G G +G V+ + N D ++QIE
Sbjct: 20 IDDLFIFKR-KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA--------- 69
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
EI +L+ L HPN+I + VF +++ ++++ + E R A
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHN--MYIVMETCEGGEL----LERIVSAQARGKALSE 123
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
L+ Q+++ + Y HS V+H+DLKP NIL +KI D G A LF K
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS-PHSPIKIIDFGLAELF----K 178
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
T Y APE+ R T DIW+ G + LLT
Sbjct: 179 SDEHSTNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 42 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 99
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 100 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 148
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 149 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 201
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 202 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 248
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 43 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 100
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 101 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 149
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 150 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 202
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 249
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 49 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 106
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 107 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 155
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+++ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 156 GIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 208
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 209 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 34/215 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLI 82
K+G+G++G V+K DN + A+K I+ +EI +L + P V
Sbjct: 14 KIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 83 SVFLSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+L D K+W++ +Y + DL A ++L +IL G
Sbjct: 72 GSYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-------------TILREILKG 116
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLADLDPVVVTF 197
+ YLHS +HRD+K AN+L+ E G VK+AD G A +L + +K + V T
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLS----EHGEVKLADFGVAGQLTDTQIK----RNXFVGTP 168
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
++ APE++ + + +KA DIW++G EL EP
Sbjct: 169 FWMAPEVIKQSAYDSKA-DIWSLGITAIELARGEP 202
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR PN+I L +
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--GGPNIITLADIV 101
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
R L+F++ + +Y+IL + Y HS
Sbjct: 102 KDPVSRTPALVFEHVNN-----------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 150
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRD+KP N+L+ E ++++ D G A ++ P + + V + +++ PELL
Sbjct: 151 GIMHRDVKPHNVLI---DHEHRKLRLIDWGLAEFYH----PGQEYNVRVASRYFKGPELL 203
Query: 206 LGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ + Y ++D+W++GC+ A ++ EP FH ++DQL RI V+G
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD---------NYDQLVRIAKVLG 250
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 28/220 (12%)
Query: 21 DYE-GCKVGRGTYGHVYKARRKDNSDTRDYALK-----QIEGTGLSMSACREIALLRELK 74
D+E G +G+G +G+VY AR K + ALK QIE G+ REI + L
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFI--VALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
HPN++ L + F ++ R+++L+ +YA + K +++ +
Sbjct: 82 HPNILRLYNYF--YDRRRIYLILEYAPRGELY--------KELQKSCTFDEQRTATIMEE 131
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+ D + Y H V+HRD+KP N+L+ +G +KIAD G++ P +
Sbjct: 132 LADALMYCHGKKVIHRDIKPENLLLG----LKGELKIADFGWSV-----HAPSLRRKTMC 182
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T Y PE++ G H K +D+W IG + ELL P F
Sbjct: 183 GTLDYLPPEMIEGRMHNEK-VDLWCIGVLCYELLVGNPPF 221
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 48/245 (19%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR N+I LI
Sbjct: 45 KLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLR--GGTNIIKLIDTV 102
Query: 86 LSHNDRKVWLLFDYAEH----DLWHI-----IKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
+ L+F+Y + L+ I I+F+ +Y++L
Sbjct: 103 KDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFY--------------------MYELL 142
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
+ Y HS ++HRD+KP N+++ ++ ++++ D G A ++ P + + V +
Sbjct: 143 KALDYCHSKGIMHRDVKPHNVMI---DHQQKKLRLIDWGLAEFYH----PAQEYNVRVAS 195
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+++ PELL+ + Y ++D+W++GC+ A ++ EP FH + ++DQL RI
Sbjct: 196 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD---------NYDQLVRI 246
Query: 256 FSVMG 260
V+G
Sbjct: 247 AKVLG 251
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 48/245 (19%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+GRG Y V++A N++ + + + + LR N+I LI
Sbjct: 50 KLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLR--GGTNIIKLIDTV 107
Query: 86 LSHNDRKVWLLFDYAEH----DLWHI-----IKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
+ L+F+Y + L+ I I+F+ +Y++L
Sbjct: 108 KDPVSKTPALVFEYINNTDFKQLYQILTDFDIRFY--------------------MYELL 147
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
+ Y HS ++HRD+KP N+++ ++ ++++ D G A ++ P + + V +
Sbjct: 148 KALDYCHSKGIMHRDVKPHNVMI---DHQQKKLRLIDWGLAEFYH----PAQEYNVRVAS 200
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+++ PELL+ + Y ++D+W++GC+ A ++ EP FH + ++DQL RI
Sbjct: 201 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD---------NYDQLVRI 251
Query: 256 FSVMG 260
V+G
Sbjct: 252 AKVLG 256
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLIS 83
K+G+G G VY A D + ++ A++Q ++ EI ++RE K+PN++N +
Sbjct: 28 KIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 84 VFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+L ++ +W++ +Y A L ++ ++ + L + +L
Sbjct: 86 SYLVGDE--LWVVMEYLAGGSLTDVV----------TETCMDEGQIAAVCRECLQALEFL 133
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HSN V+HR++K NIL+ G++ G VK+ D GF + +V T ++ AP
Sbjct: 134 HSNQVIHRNIKSDNILL---GMD-GSVKLTDFGFCAQIT---PEQSKRSTMVGTPYWMAP 186
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E++ + Y +DIW++G + E++ EP +
Sbjct: 187 EVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 19 LFDYEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS---ACREIALLRELK 74
L D+E + +GRG +G V++A K+ D +YA+K+I ++ RE+ L +L+
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 75 HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXX 126
HP ++ + +L N KV+L Y + L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYL---YIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
+ QI + + +LHS ++HRDLKP+NI + + VK+ D G + +
Sbjct: 119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV----VKVGDFGLVTAMDQDEEE 174
Query: 187 LADLDPV---------VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 237
L P+ V T Y +PE + G Y+ +DI+++G I ELL F +
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLYP---FSTQ 230
Query: 238 QEDIKT 243
E ++T
Sbjct: 231 MERVRT 236
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G VY R+ D YA+K ++ + M +AL + +++L+S
Sbjct: 196 IGRGGFGEVYGCRKADTGKM--YAMKCLDKKRIKMKQGETLALNERI----MLSLVST-- 247
Query: 87 SHNDRKVWLLFDYAEH---DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIH 140
D + YA H L I+ + + + +I+ G+
Sbjct: 248 --GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
++H+ +V++RDLKPANIL+ E G V+I+D+G A F+ KP A V T Y
Sbjct: 306 HMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKK-KPHAS----VGTHGYM 356
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE+L Y + D +++GC+ +LL F RQ K + ++DR+ M
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF--RQHKTKDKH-----EIDRMTLTMA 409
Query: 261 FPLEKDWE-DIRKMPEHPTLLKDFNEQI 287
L + ++R + E L +D N ++
Sbjct: 410 VELPDSFSPELRSLLEG-LLQRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G VY R+ D YA+K ++ + M +AL + +++L+S
Sbjct: 197 IGRGGFGEVYGCRKADTGKM--YAMKCLDKKRIKMKQGETLALNERI----MLSLVST-- 248
Query: 87 SHNDRKVWLLFDYAEH---DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIH 140
D + YA H L I+ + + + +I+ G+
Sbjct: 249 --GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
++H+ +V++RDLKPANIL+ E G V+I+D+G A F+ KP A V T Y
Sbjct: 307 HMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKK-KPHAS----VGTHGYM 357
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE+L Y + D +++GC+ +LL F RQ K + ++DR+ M
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF--RQHKTKDKH-----EIDRMTLTMA 410
Query: 261 FPLEKDWE-DIRKMPEHPTLLKDFNEQI 287
L + ++R + E L +D N ++
Sbjct: 411 VELPDSFSPELRSLLEG-LLQRDVNRRL 437
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G VY R+ D YA+K ++ + M +AL + +++L+S
Sbjct: 197 IGRGGFGEVYGCRKADTGKM--YAMKCLDKKRIKMKQGETLALNERI----MLSLVST-- 248
Query: 87 SHNDRKVWLLFDYAEH---DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIH 140
D + YA H L I+ + + + +I+ G+
Sbjct: 249 --GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
++H+ +V++RDLKPANIL+ E G V+I+D+G A F+ KP A V T Y
Sbjct: 307 HMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKK-KPHAS----VGTHGYM 357
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE+L Y + D +++GC+ +LL F RQ K + ++DR+ M
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF--RQHKTKDKH-----EIDRMTLTMA 410
Query: 261 FPLEKDWE-DIRKMPEHPTLLKDFNEQI 287
L + ++R + E L +D N ++
Sbjct: 411 VELPDSFSPELRSLLEG-LLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 34/268 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G VY R+ D YA+K ++ + M +AL + +++L+S
Sbjct: 197 IGRGGFGEVYGCRKADTGKM--YAMKCLDKKRIKMKQGETLALNERI----MLSLVST-- 248
Query: 87 SHNDRKVWLLFDYAEH---DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIH 140
D + YA H L I+ + + + +I+ G+
Sbjct: 249 --GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
++H+ +V++RDLKPANIL+ E G V+I+D+G A F+ KP A V T Y
Sbjct: 307 HMHNRFVVYRDLKPANILL----DEHGHVRISDLGLACDFSKK-KPHAS----VGTHGYM 357
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVMG 260
APE+L Y + D +++GC+ +LL F RQ K + ++DR+ M
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF--RQHKTKDKH-----EIDRMTLTMA 410
Query: 261 FPLEKDWE-DIRKMPEHPTLLKDFNEQI 287
L + ++R + E L +D N ++
Sbjct: 411 VELPDSFSPELRSLLEG-LLQRDVNRRL 437
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G VYKA+ K+ + + + EI +L HP ++ L+ +
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++D K+W++ ++ I + Q+L+ +++LHS
Sbjct: 86 --YHDGKLWIMIEFCPGGAVDAIMLE-------LDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRDLK N+L+ E G +++AD G + LK L D + T ++ APE++
Sbjct: 137 RIIHRDLKAGNVLMTLE----GDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 206 LGARH----YTKAIDIWAIGCIFAELLTSEPIFH 235
+ Y DIW++G E+ EP H
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 20/214 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G VYKA+ K+ + + + EI +L HP ++ L+ +
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++D K+W++ ++ I + Q+L+ +++LHS
Sbjct: 78 --YHDGKLWIMIEFCPGGAVDAIMLE-------LDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
++HRDLK N+L+ E G +++AD G + LK L D + T ++ APE++
Sbjct: 129 RIIHRDLKAGNVLMTLE----GDIRLADFGVS---AKNLKTLQKRDSFIGTPYWMAPEVV 181
Query: 206 LGARH----YTKAIDIWAIGCIFAELLTSEPIFH 235
+ Y DIW++G E+ EP H
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXX 123
+EI + + HPN+++ + F+ ++ +WL+ + + IIK H AK
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDE--LWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVL 118
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
++L ++L+G+ YLH N +HRD+K NIL+ E G V+IAD G +
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG----EDGSVQIADFGVSAF---- 170
Query: 184 LKPLADL------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
L D+ V T + APE++ R Y DIW+ G EL T +H
Sbjct: 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 63 ACREIALLRELK-HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXX 121
A EI LL E HPNVI DR +++ + +L +++ + N
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCS--ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 130
Query: 122 XXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGE---------GIERGRVKIA 172
SLL QI G+ +LHS ++HRDLKP NILV G E R+ I+
Sbjct: 131 KEYNPI--SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 173 DMGFARLFNNPLKPL-ADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLT 229
D G + ++ +L+ T +RAPELL + R T++IDI+++GC+F +L+
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 63 ACREIALLRELK-HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXX 121
A EI LL E HPNVI DR +++ + +L +++ + N
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCS--ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 130
Query: 122 XXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGE---------GIERGRVKIA 172
SLL QI G+ +LHS ++HRDLKP NILV G E R+ I+
Sbjct: 131 KEYNPI--SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 173 DMGFARLFNNPLKPL-ADLDPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLT 229
D G + ++ +L+ T +RAPELL + R T++IDI+++GC+F +L+
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE----GTGLSMSACREIALLRELKH-PNVIN 80
++GRG + V + K S ++YA K ++ G EIA+L K P VIN
Sbjct: 36 ELGRGKFAVVRQCISK--STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L V+ N ++ L+ +YA + A+ L+ QIL+G++
Sbjct: 94 LHEVY--ENTSEIILILEYAAGGEIFSLCLPELAE------MVSENDVIRLIKQILEGVY 145
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH N ++H DLKP NIL + G +KI D G +R + +L ++ T Y
Sbjct: 146 YLHQNNIVHLDLKPQNIL-LSSIYPLGDIKIVDFGMSRKIGHA----CELREIMGTPEYL 200
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE +L T A D+W IG I LLT
Sbjct: 201 APE-ILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 18/178 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXX 123
+EI + + HPN+++ + F+ ++ +WL+ + + IIK H AK
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDE--LWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVL 113
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
++L ++L+G+ YLH N +HRD+K NIL+ E G V+IAD G +
Sbjct: 114 DESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG----EDGSVQIADFGVSAF---- 165
Query: 184 LKPLADL------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
L D+ V T + APE++ R Y DIW+ G EL T +H
Sbjct: 166 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 63 ACREIALLRELK-HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXX 121
A EI LL E HPNVI DR +++ + +L +++ + N
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCS--ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 112
Query: 122 XXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGE---------GIERGRVKIA 172
SLL QI G+ +LHS ++HRDLKP NILV G E R+ I+
Sbjct: 113 KEYNPI--SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 173 DMGFARLFNNPLKPL-ADLDPVVVTFWYRAPELLLGA------RHYTKAIDIWAIGCIFA 225
D G + ++ +L+ T +RAPELL + R T++IDI+++GC+F
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 226 ELLT 229
+L+
Sbjct: 231 YILS 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLI 82
++G+G++G V+K DN + A+K I+ +EI +L + V
Sbjct: 30 RIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 83 SVFLSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+L + K+W++ +Y + DL F A ++L +IL G
Sbjct: 88 GSYLKGS--KLWIIMEYLGGGSALDLLRAGPFDEFQIA-------------TMLKEILKG 132
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLADLDPVVVTF 197
+ YLHS +HRD+K AN+L+ E+G VK+AD G A +L + +K + V T
Sbjct: 133 LDYLHSEKKIHRDIKAANVLLS----EQGDVKLADFGVAGQLTDTQIK----RNTFVGTP 184
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
++ APE++ + + +KA DIW++G EL EP
Sbjct: 185 FWMAPEVIQQSAYDSKA-DIWSLGITAIELAKGEP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLY----------FYQMLLA 126
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ + + + T
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKILGE----TSLMRTLCGTPT 181
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK---TSNPYH 248
Y APE+L +G Y +A+D W++G I L+ P F H Q +K TS Y+
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 84 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLY----------FYQMLLA 132
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ + + + T
Sbjct: 133 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKILGE----TSLMRTLCGTPT 187
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK---TSNPYH 248
Y APE+L +G Y +A+D W++G I L+ P F H Q +K TS Y+
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 203 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKL----------YFYQMLLA 251
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ L + + + T
Sbjct: 252 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKI----LGETSLMRTLCGTPT 306
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
Y APE+L +G Y +A+D W++G I L+ P F + + + + + I
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 257 SVMGFPLEKDWEDIRKM 273
V EK + ++K+
Sbjct: 367 EVWAEVSEKALDLVKKL 383
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLY----------FYQMLLA 126
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ + + + T
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKILGE----TSLMRTLCGTPT 181
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK---TSNPYH 248
Y APE+L +G Y +A+D W++G I L+ P F H Q +K TS Y+
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 26/257 (10%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 217 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLY----------FYQMLLA 265
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ L + + + T
Sbjct: 266 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKI----LGETSLMRTLCGTPT 320
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 256
Y APE+L +G Y +A+D W++G I L+ P F + + + + + I
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 380
Query: 257 SVMGFPLEKDWEDIRKM 273
V EK + ++K+
Sbjct: 381 EVWAEVSEKALDLVKKL 397
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 77 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLY----------FYQMLLA 125
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ + + + T
Sbjct: 126 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKILGE----TSLMRTLCGTPT 180
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK---TSNPYH 248
Y APE+L +G Y +A+D W++G I L+ P F H Q +K TS Y+
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 27 VGRGTYGHVYKARRKDNS--------DTRDYALKQIEGTGLSMSACREIALLRELKHPNV 78
+G G G V A + R +A+ +++ EI +L++L HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I + + F + + V L + E ++ R +A YQ+L
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLY----------FYQMLLA 126
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLH N ++HRDLKP N+L+ + E +KI D G +++ + + + T
Sbjct: 127 VQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKILGE----TSLMRTLCGTPT 181
Query: 199 YRAPELL--LGARHYTKAIDIWAIGCIFAELLTSEPIF--HCRQEDIK---TSNPYH 248
Y APE+L +G Y +A+D W++G I L+ P F H Q +K TS Y+
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 11 NERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACRE 66
N TK D +D + ++G+G + V + K + ++A K I LS RE
Sbjct: 22 NASTKFSDNYDVKE-ELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXX 122
+ R+L+HPN++ L + +L+FD +L+ I +F+ A A+
Sbjct: 79 ARICRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---- 132
Query: 123 XXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN 182
+ QIL+ I Y HSN ++HR+LKP N+L+ + + VK+AD G A N+
Sbjct: 133 --------CIQQILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVND 183
Query: 183 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T Y +PE +L Y+K +DIWA G I LL P F
Sbjct: 184 S----EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 37/233 (15%)
Query: 10 SNERTKV--EDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSAC 64
+N+ ++V E+LF + ++G+G++G VYK DN A+K I+
Sbjct: 9 ANQHSRVDPEELFT-KLDRIGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQ 65
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXX 120
+EI +L + P + +L K+W++ +Y + DL A
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKST--KLWIIMEYLGGGSALDLLKPGPLEETYIA---- 119
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RL 179
++L +IL G+ YLHS +HRD+K AN+L+ E+G VK+AD G A +L
Sbjct: 120 ---------TILREILKGLDYLHSERKIHRDIKAANVLLS----EQGDVKLADFGVAGQL 166
Query: 180 FNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
+ +K + V T ++ APE++ + + KA DIW++G EL EP
Sbjct: 167 TDTQIK----RNXFVGTPFWMAPEVIKQSAYDFKA-DIWSLGITAIELAKGEP 214
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 63 ACREIALLRELK-HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXX 121
A EI LL E HPNVI DR +++ + +L +++ + N
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCS--ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQ 112
Query: 122 XXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGE---------GIERGRVKIA 172
SLL QI G+ +LHS ++HRDLKP NILV G E R+ I+
Sbjct: 113 KEYNPI--SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 173 DMGFARLFNNPLKPL-ADLDPVVVTFWYRAPELLLGA------RHYTKAIDIWAIGCIFA 225
D G + ++ +L+ T +RAPELL + R T++IDI+++GC+F
Sbjct: 171 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 226 ELLT 229
+L+
Sbjct: 231 YILS 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 26/225 (11%)
Query: 15 KVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEG-----TGLSMSACREIAL 69
K+ED G +G+G++ VY+A + A+K I+ G+ E+ +
Sbjct: 9 KIEDF--KVGNLLGKGSFAGVYRAESIHTG--LEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 70 LRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
+LKHP+++ L + F N V+L+ + + H + +R K
Sbjct: 65 HCQLKHPSILELYNYFEDSN--YVYLVLE-----MCHNGEMNRYLK--NRVKPFSENEAR 115
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
++QI+ G+ YLHS+ +LHRDL +N+L+ +KIAD G A P +
Sbjct: 116 HFMHQIITGMLYLHSHGILHRDLTLSNLLL----TRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
L T Y +PE+ + H ++ D+W++GC+F LL P F
Sbjct: 172 L---CGTPNYISPEIATRSAHGLES-DVWSLGCMFYTLLIGRPPF 212
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 38/245 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLREL-KHPN-----VI 79
+G+G++G V KA D + A+K I+ ++ + E+ LL + KH ++
Sbjct: 62 IGKGSFGQVVKAY--DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+L F+ N + L+F+ ++L+ +++ N Q+ +
Sbjct: 120 HLKRHFMFRNH--LCLVFEMLSYNLYDLLR-------NTNFRGVSLNLTRKFAQQMCTAL 170
Query: 140 HYLHSN--WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+L + ++H DLKP NIL+ +R +KI D G + + + +
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNP--KRSAIKIVDFGSSCQLGQRIYQ------XIQSR 222
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFS 257
+YR+PE+LLG Y AID+W++GCI E+ T EP+F S DQ+++I
Sbjct: 223 FYRSPEVLLGM-PYDLAIDMWSLGCILVEMHTGEPLF---------SGANEVDQMNKIVE 272
Query: 258 VMGFP 262
V+G P
Sbjct: 273 VLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 38/245 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLREL-KHPN-----VI 79
+G+G++G V KA D + A+K I+ ++ + E+ LL + KH ++
Sbjct: 43 IGKGSFGQVVKAY--DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 100
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+L F+ N + L+F+ ++L+ +++ N Q+ +
Sbjct: 101 HLKRHFMFRNH--LCLVFEMLSYNLYDLLR-------NTNFRGVSLNLTRKFAQQMCTAL 151
Query: 140 HYLHSN--WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+L + ++H DLKP NIL+ +R +KI D G + + + +
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNP--KRSAIKIVDFGSSCQLGQRIYQ------XIQSR 203
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFS 257
+YR+PE+LLG Y AID+W++GCI E+ T EP+F S DQ+++I
Sbjct: 204 FYRSPEVLLGM-PYDLAIDMWSLGCILVEMHTGEPLF---------SGANEVDQMNKIVE 253
Query: 258 VMGFP 262
V+G P
Sbjct: 254 VLGIP 258
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA----CREIALLRELKHPNVINL 81
++G G +G+V + +D + A+KQ LS C EI ++++L HPNV++
Sbjct: 21 RLGTGGFGYVLRWIHQDTGE--QVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 82 ISV-----FLSHNDRKVWLLFDYAEH-DLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V L+ ND + L +Y E DL ++ +F +LL
Sbjct: 78 REVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIR-------TLLSD 129
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL-DPV 193
I + YLH N ++HRDLKP NI V+ G +R KI D+G+A+ + +L
Sbjct: 130 ISSALRYLHENRIIHRDLKPENI-VLQPGPQRLIHKIIDLGYAKELDQ-----GELCTEF 183
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
V T Y APE LL + YT +D W+ G + E +T
Sbjct: 184 VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA----CREIALLRELKHPNVINL 81
++G G +G+V + +D + A+KQ LS C EI ++++L HPNV++
Sbjct: 22 RLGTGGFGYVLRWIHQDTGE--QVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 82 ISV-----FLSHNDRKVWLLFDYAEH-DLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
V L+ ND + L +Y E DL ++ +F +LL
Sbjct: 79 REVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIR-------TLLSD 130
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL-DPV 193
I + YLH N ++HRDLKP NI V+ G +R KI D+G+A+ + +L
Sbjct: 131 ISSALRYLHENRIIHRDLKPENI-VLQPGPQRLIHKIIDLGYAKELDQ-----GELCTEF 184
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
V T Y APE LL + YT +D W+ G + E +T
Sbjct: 185 VGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVINL 81
+G G++G V A + + ALK I L+ S REI+ LR L+HP++I L
Sbjct: 12 LGEGSFGKVKLAYH--TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S ++ + ++ +YA ++L+ +I++ + ++ QI+ +
Sbjct: 70 YDVIKSKDE--IIMVIEYAGNELFDYIVQRDKMSEQEAR----------RFFQQIISAVE 117
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--NPLKPLADLDPVVVTFW 198
Y H + ++HRDLKP N+L+ E VKIAD G + + N LK +
Sbjct: 118 YCHRHKIVHRDLKPENLLLD----EHLNVKIADFGLSNIMTDGNFLKTSCG------SPN 167
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELL 228
Y APE++ G + +D+W+ G I +L
Sbjct: 168 YAAPEVISGKLYAGPEVDVWSCGVILYVML 197
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 38/245 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLREL-KHPN-----VI 79
+G+G++G V KA D + A+K I+ ++ + E+ LL + KH ++
Sbjct: 62 IGKGSFGQVVKAY--DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+L F+ N + L+F+ ++L+ +++ N Q+ +
Sbjct: 120 HLKRHFMFRNH--LCLVFEMLSYNLYDLLR-------NTNFRGVSLNLTRKFAQQMCTAL 170
Query: 140 HYLHSN--WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+L + ++H DLKP NIL+ +R +KI D G + + + +
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNP--KRXAIKIVDFGSSCQLGQRIYQ------XIQSR 222
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFS 257
+YR+PE+LLG Y AID+W++GCI E+ T EP+F S DQ+++I
Sbjct: 223 FYRSPEVLLGM-PYDLAIDMWSLGCILVEMHTGEPLF---------SGANEVDQMNKIVE 272
Query: 258 VMGFP 262
V+G P
Sbjct: 273 VLGIP 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVINL 81
+G G++G V A + + ALK I L+ S REI+ LR L+HP++I L
Sbjct: 22 LGEGSFGKVKLAYH--TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S ++ + ++ +YA ++L+ +I++ + ++ QI+ +
Sbjct: 80 YDVIKSKDE--IIMVIEYAGNELFDYIVQRDKMSEQEAR----------RFFQQIISAVE 127
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--NPLKPLADLDPVVVTFW 198
Y H + ++HRDLKP N+L+ E VKIAD G + + N LK +
Sbjct: 128 YCHRHKIVHRDLKPENLLLD----EHLNVKIADFGLSNIMTDGNFLKTSCG------SPN 177
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELL 228
Y APE++ G + +D+W+ G I +L
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVML 207
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 37/229 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS----------ACREIALLRELK-H 75
+GRG V + + + ++A+K +E T +S RE +LR++ H
Sbjct: 102 IGRGVSSVVRRCVHR--ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
P++I LI + S + ++L+FD + A + S++ +
Sbjct: 160 PHIITLIDSYESSS--FMFLVFDLMRKGELFDYLTEKVALSEKETR--------SIMRSL 209
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
L+ + +LH+N ++HRDLKP NIL+ + +++++D GF+ L+P L +
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILL----DDNMQIRLSDFGFS----CHLEPGEKLRELCG 261
Query: 196 TFWYRAPELL---LGARH--YTKAIDIWAIGCIFAELLTSEPIF-HCRQ 238
T Y APE+L + H Y K +D+WA G I LL P F H RQ
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ 310
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVINL 81
+G G++G V A + + ALK I L+ S REI+ LR L+HP++I L
Sbjct: 16 LGEGSFGKVKLAYH--TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S ++ + ++ +YA ++L+ +I++ + ++ QI+ +
Sbjct: 74 YDVIKSKDE--IIMVIEYAGNELFDYIVQRDKMSEQEAR----------RFFQQIISAVE 121
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--NPLKPLADLDPVVVTFW 198
Y H + ++HRDLKP N+L+ E VKIAD G + + N LK +
Sbjct: 122 YCHRHKIVHRDLKPENLLLD----EHLNVKIADFGLSNIMTDGNFLKTSCG------SPN 171
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELL 228
Y APE++ G + +D+W+ G I +L
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVML 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVINL 81
+G G++G V A + + ALK I L+ S REI+ LR L+HP++I L
Sbjct: 21 LGEGSFGKVKLAYH--TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S ++ + ++ +YA ++L+ +I++ + ++ QI+ +
Sbjct: 79 YDVIKSKDE--IIMVIEYAGNELFDYIVQRDKMSEQEAR----------RFFQQIISAVE 126
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--NPLKPLADLDPVVVTFW 198
Y H + ++HRDLKP N+L+ E VKIAD G + + N LK +
Sbjct: 127 YCHRHKIVHRDLKPENLLLD----EHLNVKIADFGLSNIMTDGNFLKTSCG------SPN 176
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELL 228
Y APE++ G + +D+W+ G I +L
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVML 206
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 31/229 (13%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIAL 69
TK D +D + ++G+G + V + K ++A K I LS RE +
Sbjct: 2 TKFSDNYDVKE-ELGKGAFSVVRRCVHKTTG--LEFAAKIINTKKLSARDFQKLEREARI 58
Query: 70 LRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXX 125
R+L+HPN++ L + +L+FD +L+ I +F+ A A+
Sbjct: 59 CRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH------- 109
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+ QIL+ I Y HSN ++HR+LKP N+L+ + + VK+AD G A N+
Sbjct: 110 -----CIQQILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDS-- 161
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T Y +PE +L Y+K +DIWA G I LL P F
Sbjct: 162 --EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIAL 69
TK D +D + ++G+G + V + K + ++A K I LS RE +
Sbjct: 2 TKFSDNYDVKE-ELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 70 LRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXX 125
R+L+HPN++ L + +L+FD +L+ I +F+ A A+
Sbjct: 59 CRKLQHPNIVRLHDSI--QEESFHYLVFDLVTGGELFEDIVAREFYSEADASH------- 109
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+ QIL+ I Y HSN ++HR+LKP N+L+ + + VK+AD G A N+
Sbjct: 110 -----CIQQILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDS-- 161
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T Y +PE +L Y+K +DIWA G I LL P F
Sbjct: 162 --EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIAL 69
TK D +D + ++G+G + V + K + ++A K I LS RE +
Sbjct: 1 TKFSDNYDVKE-ELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLEREARI 57
Query: 70 LRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXX 125
R+L+HPN++ L + +L+FD +L+ I +F+ A A+
Sbjct: 58 CRKLQHPNIVRLHDSIQEESFH--YLVFDLVTGGELFEDIVAREFYSEADASH------- 108
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+ QIL+ I Y HSN ++HR+LKP N+L+ + + VK+AD G A N+
Sbjct: 109 -----CIQQILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVNDS-- 160
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T Y +PE +L Y+K +DIWA G I LL P F
Sbjct: 161 --EAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDT-RDYALKQIEGTGLSMSAC------REIALLRELKHPNVI 79
+G+G YG V++ R+ ++T + +A+K ++ + +A E +L E+KHP ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 80 NLISVFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+LI F K++L+ +Y + +L+ ++ R L +I
Sbjct: 85 DLIYAF--QTGGKLYLILEYLSGGELF--MQLEREG-------IFMEDTACFYLAEISMA 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ +LH +++RDLKP NI++ +G VK+ D G + + T
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLN----HQGHVKLTDFGLCK---ESIHDGTVTHTFCGTIE 186
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y APE+L+ + H +A+D W++G + ++LT P F
Sbjct: 187 YMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDT-RDYALKQIEGTGLSMSAC------REIALLRELKHPNVI 79
+G+G YG V++ R+ ++T + +A+K ++ + +A E +L E+KHP ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 80 NLISVFLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+LI F K++L+ +Y + +L+ ++ R L +I
Sbjct: 85 DLIYAF--QTGGKLYLILEYLSGGELF--MQLEREG-------IFMEDTACFYLAEISMA 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ +LH +++RDLKP NI++ +G VK+ D G + + T
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLN----HQGHVKLTDFGLCK---ESIHDGTVTHXFCGTIE 186
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y APE+L+ + H +A+D W++G + ++LT P F
Sbjct: 187 YMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 39/219 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF- 85
+G G +G V+KA+ + D + Y +K+++ + A RE+ L +L H N+++ +
Sbjct: 19 IGSGGFGQVFKAKHR--IDGKTYVIKRVKYN--NEKAEREVKALAKLDHVNIVHYNGCWD 74
Query: 86 ----------LSHNDRKVWLLF------DYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
+ + K LF D + W I+ R K +
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW--IEKRRGEKLDKVLAL------- 125
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
L QI G+ Y+HS +++RDLKP+NI + ++ +VKI D G N K
Sbjct: 126 ELFEQITKGVDYIHSKKLINRDLKPSNIFL----VDTKQVKIGDFGLVTSLKNDGKRXRS 181
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
T Y +PE + ++ Y K +D++A+G I AELL
Sbjct: 182 KG----TLRYMSPE-QISSQDYGKEVDLYALGLILAELL 215
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVI 79
YE K +G G +G R K +++ A+K IE G ++ + REI R L+HPN++
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNEL--VAVKYIERGEKIAANVKREIINHRSLRHPNIV 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
V L+ + ++ +YA F R A Q++ G+
Sbjct: 79 RFKEVILTPT--HLAIVMEYASGGEL----FERICNAGRFSEDEARF----FFQQLISGV 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR---LFNNPLKPLADLDPVVVT 196
Y H+ V HRDLK N L+ +G R+KI D G+++ L + P V T
Sbjct: 129 SYCHAMQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKS-------TVGT 179
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y APE+LL + K D+W+ G +L F +E
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 27/213 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+G G+ G V AR K + + + E+ ++R+ +H NV+ + +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 86 LSHNDRKVWLLFDY----AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
L + +W+L ++ A D+ ++ + A ++ +L + Y
Sbjct: 112 LVGEE--LWVLMEFLQGGALTDIVSQVRLNEEQIA-------------TVCEAVLQALAY 156
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
LH+ V+HRD+K +IL+ + GRVK++D GF + K + +V T ++ A
Sbjct: 157 LHAQGVIHRDIKSDSILLTLD----GRVKLSDFGFCAQIS---KDVPKRKXLVGTPYWMA 209
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
PE ++ Y +DIW++G + E++ EP +
Sbjct: 210 PE-VISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 105/254 (41%), Gaps = 36/254 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISVF 85
+G G +G R K + A+K IE G + + REI R L+HPN++ V
Sbjct: 28 IGSGNFGVARLMRDKLTKEL--VAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
L+ + ++ +YA + R A Q+L G+ Y HS
Sbjct: 86 LTPT--HLAIIMEYASGGEL----YERICNAGRFSEDEARF----FFQQLLSGVSYCHSM 135
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFAR---LFNNPLKPLADLDPVVVTFWYRAP 202
+ HRDLK N L+ +G R+KI D G+++ L + P V T Y AP
Sbjct: 136 QICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKS-------TVGTPAYIAP 186
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV-MGF 261
E+LL + K D+W+ G +L F ED + Y + RI SV
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF----EDPEEPRDYRK-TIQRILSVKYSI 241
Query: 262 PLEKDWEDIRKMPE 275
P +DIR PE
Sbjct: 242 P-----DDIRISPE 250
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+EI LLR L+H NVI L+ V + +K++++ +Y + ++ +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLD-------SVPEKRFP 107
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
Q++DG+ YLHS ++H+D+KP N+L+ G +KI+ +G A L
Sbjct: 108 VCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL----TTGGTLKISALGVAEA----L 159
Query: 185 KPLADLDPVVVTFW---YRAPELLLGARHYTK-AIDIWAIGCIFAELLTS 230
P A D + ++ PE+ G ++ +DIW+ G + T
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 121/255 (47%), Gaps = 37/255 (14%)
Query: 13 RTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRE 72
+ K+ED ++ +G+G++G V+ A K + +A+K ++ + M E ++ +
Sbjct: 13 KLKIEDFILHK--MLGKGSFGKVFLAEFKKTNQF--FAIKALKKDVVLMDDDVECTMVEK 68
Query: 73 ------LKHPNVINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXX 124
+HP + ++ F + + ++ + +Y ++HI H+ +
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKEN--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA- 125
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+I+ G+ +LHS +++RDLK NIL+ + G +KIAD G + N L
Sbjct: 126 ---------EIILGLQFLHSKGIVYRDLKLDNILLDKD----GHIKIADFGMCK--ENML 170
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED---- 240
A + T Y APE+LLG + Y ++D W+ G + E+L + FH + E+
Sbjct: 171 GD-AKTNXFCGTPDYIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 241 -IKTSNPYHHDQLDR 254
I+ NP++ L++
Sbjct: 229 SIRMDNPFYPRWLEK 243
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVI 79
YE K +G G +G R K ++ A+K IE G + + REI R L+HPN++
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANEL--VAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
V L+ + ++ +YA F R A Q++ G+
Sbjct: 79 RFKEVILTPT--HLAIVMEYASGGEL----FERICNAGRFSEDEARF----FFQQLISGV 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y H+ V HRDLK N L+ +G R+KIAD G+++ +P + V T Y
Sbjct: 129 SYAHAMQVAHRDLKLENTLL--DGSPAPRLKIADFGYSKASVLHSQPKS----AVGTPAY 182
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
APE+LL + K D+W+ G +L F +E
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACRE-----IALLRELKHPNVIN 80
K+G G+ G V A K + A+K+++ L RE + ++R+ H NV++
Sbjct: 52 KIGEGSTGIVCIATEKHTG--KQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ S +L ++ +W++ ++ E I H ++ +L +
Sbjct: 107 MYSSYLVGDE--LWVVMEFLEGGALTDIVTHTRMNEEQIA---------TVCLSVLRALS 155
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH+ V+HRD+K +IL+ + GR+K++D GF + K + +V T ++
Sbjct: 156 YLHNQGVIHRDIKSDSILLTSD----GRIKLSDFGFCAQVS---KEVPKRKXLVGTPYWM 208
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APE ++ Y +DIW++G + E++ EP +
Sbjct: 209 APE-VISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRE------LKHPNVIN 80
+G+G++G V+ A K + +A+K ++ + M E ++ + +HP + +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQF--FAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 81 LISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+ F + + ++ + +Y ++HI H+ + +I+ G
Sbjct: 84 MFCTFQTKEN--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA----------EIILG 131
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ +LHS +++RDLK NIL+ + G +KIAD G + N L A + T
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKD----GHIKIADFGMCK--ENMLGD-AKTNEFCGTPD 184
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED-----IKTSNPYHHDQLD 253
Y APE+LLG + Y ++D W+ G + E+L + FH + E+ I+ NP++ L+
Sbjct: 185 YIAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLE 243
Query: 254 R 254
+
Sbjct: 244 K 244
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 50/223 (22%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
VGRG +G V KA+ + +D A+KQIE + E+ L + HPN++ L L
Sbjct: 17 VGRGAFGVVCKAKWR----AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 87 SHNDRKVWLLFDYAE-HDLWHI------IKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+ V L+ +YAE L+++ + ++ AA A S Q G+
Sbjct: 73 N----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA------------MSWCLQCSQGV 116
Query: 140 HYLHS---NWVLHRDLKPANILVMGEGIERGRVKIADMGFA-----RLFNNPLKPLADLD 191
YLHS ++HRDLKP N+L++ G +KI D G A + NN
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGT---VLKICDFGTACDIQTHMTNNK-------- 165
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+ + APE+ G+ +Y++ D+++ G I E++T F
Sbjct: 166 ---GSAAWMAPEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 50/223 (22%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
VGRG +G V KA+ + +D A+KQIE + E+ L + HPN++ L L
Sbjct: 16 VGRGAFGVVCKAKWR----AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 87 SHNDRKVWLLFDYAE-HDLWHI------IKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
+ V L+ +YAE L+++ + ++ AA A S Q G+
Sbjct: 72 N----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA------------MSWCLQCSQGV 115
Query: 140 HYLHS---NWVLHRDLKPANILVMGEGIERGRVKIADMGFA-----RLFNNPLKPLADLD 191
YLHS ++HRDLKP N+L++ G +KI D G A + NN
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGT---VLKICDFGTACDIQTHMTNNK-------- 164
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+ + APE+ G+ +Y++ D+++ G I E++T F
Sbjct: 165 ---GSAAWMAPEVFEGS-NYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 27 VGRGTYGHV-----YKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINL 81
+G G++G V YK ++K + + + ++ + + M REI+ L+ L+HP++I L
Sbjct: 17 LGEGSFGKVKLATHYKTQQK--VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + D + ++ +YA +L+ +I++ R + QI+ I
Sbjct: 75 YDVITTPTD--IVMVIEYAGGELFDYIVEKKRMTEDEGR----------RFFQQIICAIE 122
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--NPLKPLADLDPVVVTFW 198
Y H + ++HRDLKP N+L+ + VKIAD G + + N LK +
Sbjct: 123 YCHRHKIVHRDLKPENLLLD----DNLNVKIADFGLSNIMTDGNFLKTSCG------SPN 172
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
Y APE++ G + +D+W+ G + +L
Sbjct: 173 YAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVI 79
YE K +G G +G R K +++ A+K IE G + + REI R L+HPN++
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNEL--VAVKYIERGEKIDENVKREIINHRSLRHPNIV 77
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
V L+ + ++ +YA F R A Q++ G+
Sbjct: 78 RFKEVILTPT--HLAIVMEYASGGEL----FERICNAGRFSEDEARF----FFQQLISGV 127
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y H+ V HRDLK N L+ +G R+KI D G+++ +P + V T Y
Sbjct: 128 SYCHAMQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKS----TVGTPAY 181
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
APE+LL + K D+W+ G +L F +E
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 221
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 52/232 (22%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF- 85
+G G +G V+KA+ + D + Y +++++ + A RE+ L +L H N+++ +
Sbjct: 20 IGSGGFGQVFKAKHR--IDGKTYVIRRVKYN--NEKAEREVKALAKLDHVNIVHYNGCWD 75
Query: 86 ------------LSHND-----------RKVWLLF------DYAEHDLWHIIKFHRAAKA 116
L +D K LF D + W I+ R K
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW--IEKRRGEKL 133
Query: 117 NXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGF 176
+ L QI G+ Y+HS ++HRDLKP+NI + ++ +VKI D G
Sbjct: 134 DKVLAL-------ELFEQITKGVDYIHSKKLIHRDLKPSNIFL----VDTKQVKIGDFGL 182
Query: 177 ARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
N K T Y +PE + ++ Y K +D++A+G I AELL
Sbjct: 183 VTSLKNDGKRTRSKG----TLRYMSPE-QISSQDYGKEVDLYALGLILAELL 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXX 123
RE+ +L H N++++I V D +L+ +Y E L I+ H +
Sbjct: 60 REVHNSSQLSHQNIVSMIDV--DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI--- 114
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
+ QILDGI + H ++HRD+KP NIL+ +KI D G A+ +
Sbjct: 115 ------NFTNQILDGIKHAHDMRIVHRDIKPQNILIDS----NKTLKIFDFGIAKALSE- 163
Query: 184 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
L + V+ T Y +PE G + DI++IG + E+L EP F+
Sbjct: 164 -TSLTQTNHVLGTVQYFSPEQAKG-EATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 28/236 (11%)
Query: 15 KVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEG-TGLSMSAC-REIALLRE 72
K ED++ +G G Y V A N ++YA+K IE G S S RE+ L +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNG--KEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 73 LK-HPNVINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXX 129
+ + N++ LI F +D + +L+F+ + L HI K
Sbjct: 67 CQGNKNILELIEFF--EDDTRFYLVFEKLQGGSILAHIQK----------QKHFNEREAS 114
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMG-EGIERGRVKIADMGFARLFNNPLKPLA 188
++ + + +LH+ + HRDLKP NIL E + ++ D+G NN P+
Sbjct: 115 RVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT 174
Query: 189 --DLDPVVVTFWYRAPELLL----GARHYTKAIDIWAIGCIFAELLTSEPIF--HC 236
+L + Y APE++ A Y K D+W++G + +L+ P F HC
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRD+KPANIL+ VK+ D G AR + + V+ T
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATNA----VKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
Y +PE G ++ D++++GC+ E+LT EP F D S Y H + D I
Sbjct: 184 QYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPF---TGDSPVSVAYQHVREDPI 237
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK-HPNVINLISVF 85
+G G++ K K ++ +A+K I + + +EI L+ + HPN++ L VF
Sbjct: 19 LGEGSFSICRKCVHKKSNQA--FAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
H+ +L+ + F R K ++ +++ + ++H
Sbjct: 76 --HDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASY----IMRKLVSAVSHMHDV 125
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLF---NNPLKPLADLDPVVVTFWYRAP 202
V+HRDLKP N+L E + +KI D GFARL N PLK T Y AP
Sbjct: 126 GVVHRDLKPENLLFTDEN-DNLEIKIIDFGFARLKPPDNQPLK------TPCFTLHYAAP 178
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 245
E LL Y ++ D+W++G I +L+ + F + ++
Sbjct: 179 E-LLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 111/230 (48%), Gaps = 29/230 (12%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDT-RDYALKQIE------GTGLSMSAC-REIALLRE 72
YE C+V G+G + V RR N +T + +A+K ++ GLS RE ++
Sbjct: 26 YELCEVIGKGAFSVV---RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-HDL-WHIIKFHRAAKANXXXXXXXXXXXXS 130
LKHP+++ L+ + S D ++++F++ + DL + I+K A
Sbjct: 83 LKHPHIVELLETYSS--DGMLYMVFEFMDGADLCFEIVKRADAG------FVYSEAVASH 134
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLAD 189
+ QIL+ + Y H N ++HRD+KP N+L+ + VK+ D G A +L + L
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPENVLLASKE-NSAPVKLGDFGVAIQLGESGLVAGGR 193
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
V T + APE ++ Y K +D+W G I LL+ F+ +E
Sbjct: 194 ----VGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ LA T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLAG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIALLRELKHPNVINL 81
++G+G + V + +K + T++YA K I LS RE + R LKHPN++ L
Sbjct: 38 ELGKGAFSVVRRCVKK--TPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 95
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+L+FD +L+ I +++ A A+ ++QIL+
Sbjct: 96 HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADAS------------HCIHQILE 141
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
++++H + ++HRDLKP N+L + + VK+AD G A + T
Sbjct: 142 SVNHIHQHDIVHRDLKPENLL-LASKCKGAAVKLADFGLAIEVQGEQQAWFGF---AGTP 197
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y +PE+L Y K +DIWA G I LL P F
Sbjct: 198 GYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 132 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 188 APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 159
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 160 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 216 APESLTESK-FSVASDVWSFGVVLYELFT 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 126
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 127 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 183 APESLTESK-FSVASDVWSFGVVLYELFT 210
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL-------SMSACREIALLRELKHPNVI 79
+G+G + Y+ D + +A K + + L MS EIA+ + L +P+V+
Sbjct: 34 LGKGGFAKCYEITDMDTKEV--FAGKVVPKSMLLKPHQKEKMST--EIAIHKSLDNPHVV 89
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F +D V+++ + +++ H+ KA + Q + G+
Sbjct: 90 GFHGFF--EDDDFVYVVLEICRR--RSLLELHKRRKA------VTEPEARYFMRQTIQGV 139
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YLH+N V+HRDLK N L + + ++ VKI D G A + DL T Y
Sbjct: 140 QYLHNNRVIHRDLKLGN-LFLNDDMD---VKIGDFGLATKIEFDGERKKDL---CGTPNY 192
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
APE+L H + +DIW++GCI LL +P F C +E
Sbjct: 193 IAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKE 233
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 134
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 135 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 191 APESLTESK-FSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 135
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 136 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 192 APESLTESK-FSVASDVWSFGVVLYELFT 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRD+KPANI++ VK+ D G AR + + V+ T
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
Y +PE G ++ D++++GC+ E+LT EP F D S Y H + D I
Sbjct: 184 QYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPF---TGDSPVSVAYQHVREDPI 237
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRD+KPANI++ VK+ D G AR + + V+ T
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
Y +PE G ++ D++++GC+ E+LT EP F D S Y H + D I
Sbjct: 184 QYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPF---TGDSPVSVAYQHVREDPI 237
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRD+KPANI++ VK+ D G AR + + V+ T
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
Y +PE G ++ D++++GC+ E+LT EP F D S Y H + D I
Sbjct: 184 QYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPF---TGDSPVSVAYQHVREDPI 237
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 127
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 128 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 184 APESLTESK-FSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 133
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 134 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 190 APESLTESK-FSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 128
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 129 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 185 APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRD+KPANI++ VK+ D G AR + + V+ T
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
Y +PE G ++ D++++GC+ E+LT EP F D S Y H + D I
Sbjct: 184 QYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPD---SVAYQHVREDPI 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRD+KPANI++ VK+ D G AR + + V+ T
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
Y +PE G ++ D++++GC+ E+LT EP F D S Y H + D I
Sbjct: 201 QYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPF---TGDSPVSVAYQHVREDPI 254
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 132
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 133 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 189 APESLTESK-FSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ QI G+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGME 128
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 129 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 185 APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G+Y + K + ++A+K I+ + + EI LLR +HPN+I L V+
Sbjct: 30 IGVGSYSVCKRCIHK--ATNMEFAVKIIDKSKRDPTEEIEI-LLRYGQHPNIITLKDVY- 85
Query: 87 SHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ + V+++ + + +L I KF +A+ ++L+ I + YL
Sbjct: 86 -DDGKYVYVVTELMKGGELLDKILRQKFFSEREAS------------AVLFTITKTVEYL 132
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
H+ V+HRDLKP+NIL + E ++I D GFA+ L + P T + AP
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTP-CYTANFVAP 189
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
E +L + Y A DIW++G + +LT F +D
Sbjct: 190 E-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD 226
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 146
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 147 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 203 APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H A + + QI G+
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAH-AERIDHIKLLQYTS-------QICKGME 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 132 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 188 APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 128
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 129 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 185 APESLTESK-FSVASDVWSFGVVLYELFT 212
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 46 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 104
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 105 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 159 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVT 204
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 205 DFGFAKRVKGATWTLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 257
Query: 233 IFHCRQ 238
F Q
Sbjct: 258 PFFADQ 263
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 146
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 147 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 203 APESLTESK-FSVASDVWSFGVVLYELFT 230
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G+Y + K + +YA+K I+ + S EI LLR +HPN+I L V+
Sbjct: 35 IGVGSYSECKRCVHK--ATNMEYAVKVIDKSKRDPSEEIEI-LLRYGQHPNIITLKDVY- 90
Query: 87 SHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ + V+L+ + +L I KF +A+ +L+ I + YL
Sbjct: 91 -DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF------------VLHTIGKTVEYL 137
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HS V+HRDLKP+NIL + E ++I D GFA+ L + P T + AP
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTP-CYTANFVAP 194
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E +L + Y + DIW++G + +L F
Sbjct: 195 E-VLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 12 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 70
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 71 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 124
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ E+G +++
Sbjct: 125 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----EQGYIQVT 170
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 171 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 223
Query: 233 IFHCRQ 238
F Q
Sbjct: 224 PFFADQ 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
A+ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FAEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL-------SMSACREIALLRELKHPNVI 79
+G+G + Y+ D + +A K + + L MS EIA+ + L +P+V+
Sbjct: 50 LGKGGFAKCYEITDMDTKEV--FAGKVVPKSMLLKPHQKEKMST--EIAIHKSLDNPHVV 105
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F +D V+++ + +++ H+ KA + Q + G+
Sbjct: 106 GFHGFF--EDDDFVYVVLEICRR--RSLLELHKRRKA------VTEPEARYFMRQTIQGV 155
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YLH+N V+HRDLK N L + + ++ VKI D G A + DL T Y
Sbjct: 156 QYLHNNRVIHRDLKLGN-LFLNDDMD---VKIGDFGLATKIEFDGERKKDL---CGTPNY 208
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
APE+L H + +DIW++GCI LL +P F C +E
Sbjct: 209 IAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 20/220 (9%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVI 79
YE K +G G +G R K +++ A+K IE G + + REI R L+HPN++
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNEL--VAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
V L+ + ++ +YA F R A Q++ G+
Sbjct: 79 RFKEVILTPT--HLAIVMEYASGGEL----FERICNAGRFSEDEARF----FFQQLISGV 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
Y H+ V HRDLK N L+ +G R+KI G+++ +P + V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKS----TVGTPAY 182
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
APE+LL + K D+W+ G +L F +E
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G+Y + K + ++A+K I+ + + EI LLR +HPN+I L V+
Sbjct: 30 IGVGSYSVCKRCIHK--ATNXEFAVKIIDKSKRDPTEEIEI-LLRYGQHPNIITLKDVY- 85
Query: 87 SHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ + V+++ + + +L I KF +A+ ++L+ I + YL
Sbjct: 86 -DDGKYVYVVTELXKGGELLDKILRQKFFSEREAS------------AVLFTITKTVEYL 132
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWYR 200
H+ V+HRDLKP+NIL + E ++I D GFA+ N L L T +
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-----LXTPCYTANFV 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
APE +L + Y A DIW++G + LT F +D
Sbjct: 188 APE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDD 226
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ ++ + L ++ H+ QI G+
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE--------RIDHIKLLQYTSQICKGME 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HRDL NILV E RVKI D G ++ + +P ++
Sbjct: 132 YLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 188 APESLTESK-FSVASDVWSFGVVLYELFT 215
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS--MSACREIALLRELKHPNVINLISV 84
+G G +G V+K ++ + A K I+ G+ EI+++ +L H N+I L
Sbjct: 97 LGGGRFGQVHKC--EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
F S ND + L+ +Y + F R + + QI +GI ++H
Sbjct: 155 FESKND--IVLVMEYVDGGEL----FDRIIDESYNLTELDTIL---FMKQICEGIRHMHQ 205
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
++LH DLKP NIL + + ++KI D G AR + KP L T + APE
Sbjct: 206 MYILHLDLKPENILCVNR--DAKQIKIIDFGLARRY----KPREKLKVNFGTPEFLAPE- 258
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
++ + D+W++G I LL+
Sbjct: 259 VVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 26/227 (11%)
Query: 18 DLFDYEGCKV-GRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMS----ACREIALLR 71
D +E KV G+G++G V+ ++ SD R YA+K ++ L + E +L
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 72 ELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXS 130
E+ HP ++ L F + K++L+ D+ DL F R +K
Sbjct: 82 EVNHPFIVKLHYAF--QTEGKLYLILDFLRGGDL-----FTRLSKE----VMFTEEDVKF 130
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
L ++ + +LHS +++RDLKP NIL+ E G +K+ D G ++ + K
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 237
T Y APE ++ R +T++ D W+ G + E+LT F +
Sbjct: 187 ---CGTVEYMAPE-VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G G+Y + K + +YA+K I+ + S EI LLR +HPN+I L V+
Sbjct: 35 IGVGSYSECKRCVHK--ATNMEYAVKVIDKSKRDPSEEIEI-LLRYGQHPNIITLKDVY- 90
Query: 87 SHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ + V+L+ + +L I KF +A+ +L+ I + YL
Sbjct: 91 -DDGKHVYLVTELMRGGELLDKILRQKFFSEREASF------------VLHTIGKTVEYL 137
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
HS V+HRDLKP+NIL + E ++I D GFA+ L + P T + AP
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTP-CYTANFVAP 194
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E +L + Y + DIW++G + +L F
Sbjct: 195 E-VLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM--SACREIALLRELKHPNVINLISV 84
+GRG++G V A +K R A K+I + +EI +++ L HPN+I L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRR--AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
F + D ++L+ + +L+ + R + + ++ +L + Y H
Sbjct: 92 FEDNTD--IYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSAVAYCH 140
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
V HRDLKP N L + + + +K+ D G A F KP + V T +Y +P+
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPD-SPLKLIDFGLAARF----KPGKMMRTKVGTPYYVSPQ 195
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF-SVMGFP 262
+L G Y D W+ G + LL P F S P + + +I FP
Sbjct: 196 VLEGL--YGPECDEWSAGVMMYVLLCGYPPF---------SAPTDXEVMLKIREGTFTFP 244
Query: 263 LEKDWEDIRKMPEHPTLLK 281
EKDW ++ P+ +L++
Sbjct: 245 -EKDWLNVS--PQAESLIR 260
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 26/223 (11%)
Query: 22 YEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVI 79
YE K +G G +G R K +++ A+K IE G + + REI R L+HPN++
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNEL--VAVKYIERGEKIDENVKREIINHRSLRHPNIV 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
V L+ + ++ +YA F R A Q++ G+
Sbjct: 79 RFKEVILTPT--HLAIVMEYASGGEL----FERICNAGRFSEDEARF----FFQQLISGV 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR---LFNNPLKPLADLDPVVVT 196
Y H+ V HRDLK N L+ +G R+KI G+++ L + P V T
Sbjct: 129 SYCHAMQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKD-------TVGT 179
Query: 197 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
Y APE+LL + K D+W+ G +L F +E
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
E+ ++R+ +H NV+ + + +L ++ +W++ ++ E I H
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDE--LWVVMEFLEGGALTDIVTH---------TRMNE 246
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
++ +L + LH+ V+HRD+K +IL+ + GRVK++D GF + K
Sbjct: 247 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVS---K 299
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+ +V T ++ APE L+ Y +DIW++G + E++ EP +
Sbjct: 300 EVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM--SACREIALLRELKHPNVINLISV 84
+GRG++G V A +K R A K+I + +EI +++ L HPN+I L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRR--AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
F + D ++L+ + +L+ + R + + ++ +L + Y H
Sbjct: 75 FEDNTD--IYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSAVAYCH 123
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
V HRDLKP N L + + + +K+ D G A F KP + V T +Y +P+
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPD-SPLKLIDFGLAARF----KPGKMMRTKVGTPYYVSPQ 178
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF-SVMGFP 262
+L G Y D W+ G + LL P F S P + + +I FP
Sbjct: 179 VLEGL--YGPECDEWSAGVMMYVLLCGYPPF---------SAPTDXEVMLKIREGTFTFP 227
Query: 263 LEKDWEDIRKMPEHPTLLK 281
EKDW ++ P+ +L++
Sbjct: 228 -EKDWLNVS--PQAESLIR 243
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 29/238 (12%)
Query: 7 IKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMS-- 62
+K +E+ D +E KV G+G++G V+ ++ SD R YA+K ++ L +
Sbjct: 14 VKEGHEKA---DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR 70
Query: 63 --ACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX 119
E +L E+ HP ++ L F + K++L+ D+ DL F R +K
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAF--QTEGKLYLILDFLRGGDL-----FTRLSKE--- 120
Query: 120 XXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL 179
L ++ + +LHS +++RDLKP NIL+ E G +K+ D G ++
Sbjct: 121 -VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKE 175
Query: 180 FNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 237
+ K T Y APE ++ R +T++ D W+ G + E+LT F +
Sbjct: 176 SIDHEKKAYSF---CGTVEYMAPE-VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKH 75
FD E +GRG++ VYK D T + A +++ L+ S + E L+ L+H
Sbjct: 30 FDIE---IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQH 84
Query: 76 PNVINLISVFLSH-NDRKVWLLFD--YAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
PN++ + S +K +L L +K + K S
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLR---------SWC 135
Query: 133 YQILDGIHYLHSNW--VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
QIL G+ +LH+ ++HRDLK NI + G G VKI D+G A LK +
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFITG---PTGSVKIGDLGLA-----TLKRASFA 187
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCR 237
V+ T + APE Y +++D++A G E TSE P C+
Sbjct: 188 KAVIGTPEFXAPEXY--EEKYDESVDVYAFGXCXLEXATSEYPYSECQ 233
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 29/238 (12%)
Query: 7 IKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMS-- 62
+K +E+ D +E KV G+G++G V+ ++ SD R YA+K ++ L +
Sbjct: 15 VKEGHEKA---DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR 71
Query: 63 --ACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX 119
E +L E+ HP ++ L F + K++L+ D+ DL F R +K
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHYAF--QTEGKLYLILDFLRGGDL-----FTRLSKE--- 121
Query: 120 XXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL 179
L ++ + +LHS +++RDLKP NIL+ E G +K+ D G ++
Sbjct: 122 -VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKE 176
Query: 180 FNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 237
+ K T Y APE ++ R +T++ D W+ G + E+LT F +
Sbjct: 177 SIDHEKKAYSF---CGTVEYMAPE-VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 230
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 24 GCKVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
G ++GRG +G V+ R R DN+ + ++ L +E +L++ HPN++ LI
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD---GI 139
V + ++++ + + + F R A +LL + D G+
Sbjct: 179 GV--CTQKQPIYIVMELVQGG--DFLTFLRTEGAR--------LRVKTLLQMVGDAAAGM 226
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N LV E+ +KI+D G +R + + + V W
Sbjct: 227 EYLESKCCIHRDLAARNCLV----TEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWT 282
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R Y+ D+W+ G + E +
Sbjct: 283 -APEALNYGR-YSSESDVWSFGILLWETFS 310
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 26 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 84
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 85 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 138
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 139 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVT 184
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 185 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 237
Query: 233 IFHCRQ 238
F Q
Sbjct: 238 PFFADQ 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLXG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACRE-----IALLRELKHPNVIN 80
K+G G+ G V A + S + A+K+++ L RE + ++R+ +H NV+
Sbjct: 81 KIGEGSTGIVCIATVR--SSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + +L ++ +W++ ++ E I H ++ +L +
Sbjct: 136 MYNSYLVGDE--LWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALS 184
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
LH+ V+HRD+K +IL+ + GRVK++D GF + K + +V T ++
Sbjct: 185 VLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVS---KEVPRRKXLVGTPYWM 237
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APE L+ Y +DIW++G + E++ EP +
Sbjct: 238 APE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 51/237 (21%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK------------ 74
+GRG V + K ++YA+K I+ TG + E+ LRE
Sbjct: 25 LGRGVSSVVRRCIHKPTC--KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 75 HPNVINLISV-------FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
HPN+I L FL + K LFDY + K R
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR--------------- 127
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
++ +L+ I LH ++HRDLKP NIL+ + +K+ D GF+ L P
Sbjct: 128 --KIMRALLEVICALHKLNIVHRDLKPENILLDDD----MNIKLTDFGFS----CQLDPG 177
Query: 188 ADLDPVVVTFWYRAPELLLGARH-----YTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
L V T Y APE++ + + Y K +D+W+ G I LL P F R++
Sbjct: 178 EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL-------SMSACREIALLRELKHPNVI 79
+G+G + Y+ D + +A K + + L MS EIA+ + L +P+V+
Sbjct: 50 LGKGGFAKCYEITDMDTKEV--FAGKVVPKSMLLKPHQKEKMST--EIAIHKSLDNPHVV 105
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F +D V+++ + +++ H+ KA + Q + G+
Sbjct: 106 GFHGFF--EDDDFVYVVLEICRR--RSLLELHKRRKA------VTEPEARYFMRQTIQGV 155
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLKPLADLDPVVVTF 197
YLH+N V+HRDLK N L + + ++ VKI D G A F+ K + T
Sbjct: 156 QYLHNNRVIHRDLKLGN-LFLNDDMD---VKIGDFGLATKIEFDGERK-----KTLCGTP 206
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
Y APE+L H + +DIW++GCI LL +P F C +E
Sbjct: 207 NYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 51/237 (21%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK------------ 74
+GRG V + K ++YA+K I+ TG + E+ LRE
Sbjct: 12 LGRGVSSVVRRCIHKPTC--KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 75 HPNVINLISV-------FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
HPN+I L FL + K LFDY + K R
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR--------------- 114
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
++ +L+ I LH ++HRDLKP NIL+ + +K+ D GF+ L P
Sbjct: 115 --KIMRALLEVICALHKLNIVHRDLKPENILLDDD----MNIKLTDFGFS----CQLDPG 164
Query: 188 ADLDPVVVTFWYRAPELLLGARH-----YTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
L V T Y APE++ + + Y K +D+W+ G I LL P F R++
Sbjct: 165 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 221
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC--REIALLRELKHPNVINLIS 83
K+G G+ G V A + S + A+K+++ E+ ++R+ +H NV+ + +
Sbjct: 36 KIGEGSTGIVCIATVR--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 84 VFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
+L ++ +W++ ++ E I H ++ +L + LH
Sbjct: 94 SYLVGDE--LWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLH 142
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+ V+HRD+K +IL+ + GRVK++D GF + K + +V T ++ APE
Sbjct: 143 AQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVS---KEVPRRKXLVGTPYWMAPE 195
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
L+ Y +DIW++G + E++ EP +
Sbjct: 196 -LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACRE-----IALLRELKHPNVIN 80
K+G G+ G V A + S + A+K+++ L RE + ++R+ +H NV+
Sbjct: 38 KIGEGSTGIVCIATVR--SSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ + +L ++ +W++ ++ E I H ++ +L +
Sbjct: 93 MYNSYLVGDE--LWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALS 141
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
LH+ V+HRD+K +IL+ + GRVK++D GF + K + +V T ++
Sbjct: 142 VLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVS---KEVPRRKXLVGTPYWM 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
APE L+ Y +DIW++G + E++ EP +
Sbjct: 195 APE-LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 51/237 (21%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK------------ 74
+GRG V + K ++YA+K I+ TG + E+ LRE
Sbjct: 25 LGRGVSSVVRRCIHKPTC--KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 82
Query: 75 HPNVINLISV-------FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXX 127
HPN+I L FL + K LFDY + K R
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR--------------- 127
Query: 128 XXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL 187
++ +L+ I LH ++HRDLKP NIL+ + +K+ D GF+ L P
Sbjct: 128 --KIMRALLEVICALHKLNIVHRDLKPENILLDDD----MNIKLTDFGFS----CQLDPG 177
Query: 188 ADLDPVVVTFWYRAPELLLGARH-----YTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
L V T Y APE++ + + Y K +D+W+ G I LL P F R++
Sbjct: 178 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL-------SMSACREIALLRELKHPNVI 79
+G+G + Y+ D + +A K + + L MS EIA+ + L +P+V+
Sbjct: 50 LGKGGFAKCYEITDMDTKEV--FAGKVVPKSMLLKPHQKEKMST--EIAIHKSLDNPHVV 105
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F +D V+++ + +++ H+ KA + Q + G+
Sbjct: 106 GFHGFF--EDDDFVYVVLEICRR--RSLLELHKRRKA------VTEPEARYFMRQTIQGV 155
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLKPLADLDPVVVTF 197
YLH+N V+HRDLK N L + + ++ VKI D G A F+ K + T
Sbjct: 156 QYLHNNRVIHRDLKLGN-LFLNDDMD---VKIGDFGLATKIEFDGERK-----KXLCGTP 206
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
Y APE+L H + +DIW++GCI LL +P F C +E
Sbjct: 207 NYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKE 249
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC--REIALLRELKHPNVINLIS 83
K+G G+ G V A + S + A+K+++ E+ ++R+ +H NV+ + +
Sbjct: 31 KIGEGSTGIVCIATVR--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 84 VFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
+L ++ +W++ ++ E I H ++ +L + LH
Sbjct: 89 SYLVGDE--LWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLH 137
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+ V+HRD+K +IL+ + GRVK++D GF + K + +V T ++ APE
Sbjct: 138 AQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVS---KEVPRRKXLVGTPYWMAPE 190
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
L+ Y +DIW++G + E++ EP +
Sbjct: 191 -LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 103
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +YA H+ + R ++ + QI
Sbjct: 104 LVKLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA----------QI 151
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+++ ++G +K+ D GFA+ L
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGFAKRVKGRTWXLCG------ 201
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 24 GCKVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
G ++GRG +G V+ R R DN+ + ++ L +E +L++ HPN++ LI
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD---GI 139
V + ++++ + + + F R A +LL + D G+
Sbjct: 179 GV--CTQKQPIYIVMELVQGG--DFLTFLRTEGAR--------LRVKTLLQMVGDAAAGM 226
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N LV E+ +KI+D G +R + + + V W
Sbjct: 227 EYLESKCCIHRDLAARNCLV----TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW- 281
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R Y+ D+W+ G + E +
Sbjct: 282 TAPEALNYGR-YSSESDVWSFGILLWETFS 310
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC--REIALLRELKHPNVINLIS 83
K+G G+ G V A + S + A+K+++ E+ ++R+ +H NV+ + +
Sbjct: 27 KIGEGSTGIVCIATVR--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 84 VFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
+L ++ +W++ ++ E I H ++ +L + LH
Sbjct: 85 SYLVGDE--LWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCLAVLQALSVLH 133
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+ V+HRD+K +IL+ + GRVK++D GF + K + +V T ++ APE
Sbjct: 134 AQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVS---KEVPRRKXLVGTPYWMAPE 186
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
L+ Y +DIW++G + E++ EP +
Sbjct: 187 -LISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 50/229 (21%)
Query: 27 VGRGTYGHVY-----------KARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKH 75
+G G +G VY KA R D + ++ + +E L LKH
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVR---------QEAKLFAMLKH 65
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXX--XXXSLLY 133
PN+I L V L E +L +++F R N +
Sbjct: 66 PNIIALRGVCLK-------------EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV 112
Query: 134 QILDGIHYLHSNWV---LHRDLKPANILVMGEGIERGRV-----KIADMGFARLFNNPLK 185
QI G++YLH + +HRDLK +NIL++ + +E G + KI D G AR ++ K
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILIL-QKVENGDLSNKILKITDFGLAREWHRTTK 171
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
A + + APE++ A ++K D+W+ G + ELLT E F
Sbjct: 172 MSA-----AGAYAWMAPEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSA--CREIALLRELKHPNVINL 81
++G+G +G V R D A+KQ++ +G REI +L+ L ++
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 82 ISVFLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--QILDG 138
V + + L+ +Y L ++ HRA LLY QI G
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----------RLDASRLLLYSSQICKG 126
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV--- 195
+ YL S +HRDL NILV E VKIAD G A+L PL D D VV
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESE----AHVKIADFGLAKLL--PL----DKDYYVVREP 176
Query: 196 ----TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
FWY APE L +++ D+W+ G + EL T
Sbjct: 177 GQSPIFWY-APE-SLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 46 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 104
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 105 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
+ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 159 FXEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVT 204
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 205 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 257
Query: 233 IFHCRQ 238
F Q
Sbjct: 258 PFFADQ 263
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSA--CREIALLRELKHPNVINL 81
++G+G +G V R D A+KQ++ +G REI +L+ L ++
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 82 ISVFLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--QILDG 138
V ++ L+ +Y L ++ HRA LLY QI G
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA----------RLDASRLLLYSSQICKG 123
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV--- 195
+ YL S +HRDL NILV E VKIAD G A+L PL D D VV
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESE----AHVKIADFGLAKLL--PL----DKDXXVVREP 173
Query: 196 ----TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
FWY APE L +++ D+W+ G + EL T
Sbjct: 174 GQSPIFWY-APE-SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLS--MSACREIALLRELKHPNVINL 81
++G+G +G V R D A+K+++ + REI +L+ L+H N++
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V S R + L+ +Y + L ++ H+ + QI G+
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--------QICKGME 129
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL + +HR+L NILV E RVKI D G ++ + +P ++
Sbjct: 130 YLGTKRYIHRNLATRNILVENE----NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L ++ ++ A D+W+ G + EL T
Sbjct: 186 APESLTESK-FSVASDVWSFGVVLYELFT 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 40/220 (18%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYA-----------LKQIEGTGLSMSACREIALLRELKH 75
+G G++G V+ R + N R YA LKQ+E T E +L + H
Sbjct: 14 LGTGSFGRVHLIRSRHNG--RYYAMKVLKKEIVVRLKQVEHTN------DERLMLSIVTH 65
Query: 76 PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
P +I + F + ++++++ DY E + R ++ L
Sbjct: 66 PFIIRMWGTF--QDAQQIFMIMDYIEGG--ELFSLLRKSQRFPNPVAKFYAAEVCL---- 117
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP NIL+ + G +KI D GFA+ + L
Sbjct: 118 --ALEYLHSKDIIYRDLKPENILLD----KNGHIKITDFGFAKYVPDVTYXLCG------ 165
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE ++ + Y K+ID W+ G + E+L F+
Sbjct: 166 TPDYIAPE-VVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSA--CREIALLRELKHPNVINL 81
++G+G +G V R D A+KQ++ +G REI +L+ L ++
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 82 ISVFLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--QILDG 138
V + + L+ +Y L ++ HRA LLY QI G
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----------RLDASRLLLYSSQICKG 139
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV--- 195
+ YL S +HRDL NILV E VKIAD G A+L PL D D VV
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESE----AHVKIADFGLAKLL--PL----DKDYYVVREP 189
Query: 196 ----TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
FWY APE L +++ D+W+ G + EL T
Sbjct: 190 GQSPIFWY-APE-SLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E + + + P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRIQQAVNFPF 103
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +YA H+ + R ++ + QI
Sbjct: 104 LVKLEFSF--KDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA----------QI 151
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +K+AD GFA+ L
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIKVADFGFAKRVKGRTWXLCG------ 201
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
+ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FXEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQI----EGTGLSMSACREIALLRELKHPNVI 79
G +G+G +G K ++ + +K++ E T + +E+ ++R L+HPNV+
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEV--MVMKELIRFDEET--QRTFLKEVKVMRCLEHPNVL 70
Query: 80 NLISVFLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
I V + D+++ + +Y + L IIK S I G
Sbjct: 71 KFIGVL--YKDKRLNFITEYIKGGTLRGIIK--------SMDSQYPWSQRVSFAKDIASG 120
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF----NNP--LKPLADLD- 191
+ YLHS ++HRDL N LV E V +AD G ARL P L+ L D
Sbjct: 121 MAYLHSMNIIHRDLNSHNCLVR----ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 192 ----PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
VV ++ APE++ G R Y + +D+++ G + E++
Sbjct: 177 KKRYTVVGNPYWMAPEMING-RSYDEKVDVFSFGIVLCEII 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
+ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FXEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 20 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 78
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 79 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 132
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
+ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 133 FXEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 178
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 179 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 231
Query: 233 IFHCRQ 238
F Q
Sbjct: 232 PFFADQ 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 94/218 (43%), Gaps = 36/218 (16%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSA--CREIALLRELKHPNVINL 81
++G+G +G V R D A+KQ++ +G REI +L+ L ++
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 82 ISVFLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--QILDG 138
V + + L+ +Y L ++ HRA LLY QI G
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA----------RLDASRLLLYSSQICKG 127
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV--- 195
+ YL S +HRDL NILV E VKIAD G A+L PL D D VV
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESE----AHVKIADFGLAKLL--PL----DKDYYVVREP 177
Query: 196 ----TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
FWY APE L +++ D+W+ G + EL T
Sbjct: 178 GQSPIFWY-APE-SLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYAL---KQIEGTGLSMSACREIALLRELKHPNVIN 80
G +G GT+G V + + + ++I + REI L+ +HP++I
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 81 LISVFLSHNDRKVWLLFDYAEH-DLW-HIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L V + +D ++++ +Y +L+ +I K R + L QIL G
Sbjct: 81 LYQVISTPSD--IFMVMEYVSGGELFDYICKNGRLDEKESR----------RLFQQILSG 128
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ Y H + V+HRDLKP N+L+ KIAD G + + ++ L +
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAH----MNAKIADFGLSNMMSDG----EFLRXSCGSPN 180
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELL 228
Y APE++ G + +DIW+ G I LL
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALL 210
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
+ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FXEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +K+AD GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIKVADFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +K+AD GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIKVADFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +K+AD GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIKVADFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 45 DTRDYALKQIEGTGLSMSACREIALLREL-KHPNVINLISVFLSHNDRKV-WLLFDYAEH 102
D RD A+K+I S A RE+ LLRE +HPNVI F + DR+ ++ +
Sbjct: 47 DNRDVAVKRILPECFSF-ADREVQLLRESDEHPNVIRY---FCTEKDRQFQYIAIELCAA 102
Query: 103 DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILV-MG 161
L ++ A +LL Q G+ +LHS ++HRDLKP NIL+ M
Sbjct: 103 TLQEYVEQKDFAHLGLEPI--------TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154
Query: 162 EGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLL--GARHYTKAIDIWA 219
+ + I+D G + + V T + APE+L + T +DI++
Sbjct: 155 NAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFS 214
Query: 220 IGCIF 224
GC+F
Sbjct: 215 AGCVF 219
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + ++ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 168
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 168
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 168
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 113
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 114 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 166
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERL---LNKMC 168
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKH-PNVINLISV 84
VG GTYG VYK R A+K ++ TG + EI +L++ H N+
Sbjct: 32 VGNGTYGQVYKGRHVKTGQL--AAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 85 FLSHN----DRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
F+ N D ++WL+ ++ + + K N + +IL G+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFC--GAGSVTDLIKNTKGNTLKEEWIAY----ICREILRGLS 143
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
+LH + V+HRD+K N+L+ E VK+ D G + + + + + + T ++
Sbjct: 144 HLHQHKVIHRDIKGQNVLL----TENAEVKLVDFGVSAQLD---RTVGRRNTFIGTPYWM 196
Query: 201 APELLLGARH----YTKAIDIWAIGCIFAELLTSEP 232
APE++ + Y D+W++G E+ P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 168
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN-NPLKPLADLDPVVV 195
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F N + L L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERL--LNKMCG 169
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 36/216 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN-NPLKPLADLDPVVV 195
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F N + L L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL--LNKMCG 168
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHC 236
F
Sbjct: 237 PFFA 240
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMX 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMC 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 115
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERL---LNKMX 168
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMX 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMX 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L + APE++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCGTPEAL------APEIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+++ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLIID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y APE+++ ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE---GTGLSMSACREIALLRELKHPNVINLIS 83
+G G YG V A + + A+K ++ + +EI + + L H NV+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA--VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 84 VFLSHNDRKVWL-------LFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQIL 136
N + ++L LFD E D+ +Q++
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDI-----------------GMPEPDAQRFFHQLM 114
Query: 137 DGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVV 194
G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN + L+ +
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL---LNKMX 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
T Y APELL + + +D+W+ G + +L E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLA 188
+Q++ G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN +
Sbjct: 109 FFHQLMAGVVYLHGIGITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERL-- 162
Query: 189 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
L+ + T Y APELL + + +D+W+ G + +L E
Sbjct: 163 -LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 37/246 (15%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSD---------TRDYALK 52
D+ K +T ++ T D FD +G G++G V + K++ + + LK
Sbjct: 25 DFLKKWETPSQNTAQLDQFDRIKT-LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK 83
Query: 53 QIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHR 112
QIE T E +L+ + P ++ L F +++ + + + H+ + R
Sbjct: 84 QIEHT------LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 113 AAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA 172
++ + QI+ YLHS +++RDLKP N+L+ ++G +++
Sbjct: 138 FSEPHARFYAA----------QIVLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVT 183
Query: 173 DMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEP 232
D GFA+ L T Y AP ++L ++ Y KA+D WA+G + E+ P
Sbjct: 184 DFGFAKRVKGRTWXLCG------TPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYP 236
Query: 233 IFHCRQ 238
F Q
Sbjct: 237 PFFADQ 242
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLA 188
+Q++ G+ YLH + HRD+KP N+L+ ER +KI+D G A +F NN +
Sbjct: 110 FFHQLMAGVVYLHGIGITHRDIKPENLLL----DERDNLKISDFGLATVFRYNNRERL-- 163
Query: 189 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
L+ + T Y APELL + + +D+W+ G + +L E
Sbjct: 164 -LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDT-------RDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
+G+G + ++ D + + LK + +SM EI++ R L H +V+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 102
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F ND V+++ + +++ H+ KA L QI+ G
Sbjct: 103 GFHG-FFEDNDF-VFVVLELCRR--RSLLELHKRRKA------LTEPEARYYLRQIVLGC 152
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLKPLADLDPVVVTF 197
YLH N V+HRDLK N L + E +E VKI D G A ++ K + + T
Sbjct: 153 QYLHRNRVIHRDLKLGN-LFLNEDLE---VKIGDFGLATKVEYDGERKKV-----LCGTP 203
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
Y APE +L + ++ +D+W+IGCI LL +P F C +E
Sbjct: 204 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 246
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 35/224 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDT-------RDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
+G+G + ++ D + + LK + +SM EI++ R L H +V+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F ND V+++ + +++ H+ KA L QI+ G
Sbjct: 79 GFHG-FFEDNDF-VFVVLELCRR--RSLLELHKRRKA------LTEPEARYYLRQIVLGC 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLKPLADLDPVVVTF 197
YLH N V+HRDLK N L + E +E VKI D G A ++ K + P
Sbjct: 129 QYLHRNRVIHRDLKLGN-LFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTP----- 179
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
Y APE +L + ++ +D+W+IGCI LL +P F C +E
Sbjct: 180 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 95
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 96 LVKLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 143
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 193
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 194 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 235
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 27 VGRGTYGHVYKARRKDNSDT-------RDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
+G+G + ++ D + + LK + +SM EI++ R L H +V+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 104
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F ND V+++ + +++ H+ KA L QI+ G
Sbjct: 105 GFHG-FFEDNDF-VFVVLELCRR--RSLLELHKRRKA------LTEPEARYYLRQIVLGC 154
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL--FNNPLKPLADLDPVVVTF 197
YLH N V+HRDLK N L + E +E VKI D G A ++ K + + T
Sbjct: 155 QYLHRNRVIHRDLKLGN-LFLNEDLE---VKIGDFGLATKVEYDGERKKV-----LCGTP 205
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
Y APE +L + ++ +D+W+IGCI LL +P F C +E
Sbjct: 206 NYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 248
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 31 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 87
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 88 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 143
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 144 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 191
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 192 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 247 IPFEHDEEIIR 257
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 11 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 67
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 68 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 123
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 124 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 171
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 172 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 227 IPFEHDEEIIR 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 102
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 103 LVKLEYSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 150
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVTDFGFAKRVKGRTWXLCG------ 200
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDT-------RDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
+G+G + ++ D + + LK + +SM EI++ R L H +V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 80
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F ND V+++ + +++ H+ KA L QI+ G
Sbjct: 81 GFHG-FFEDNDF-VFVVLELCRR--RSLLELHKRRKA------LTEPEARYYLRQIVLGC 130
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YLH N V+HRDLK N L + E +E VKI D G A + L T Y
Sbjct: 131 QYLHRNRVIHRDLKLGN-LFLNEDLE---VKIGDFGLATKVEYDGERKKTL---CGTPNY 183
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
APE +L + ++ +D+W+IGCI LL +P F C +E
Sbjct: 184 IAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 123
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 124 LVKLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 171
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 221
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 222 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 102
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 103 LVKLEYSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 150
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVTDFGFAKRVKGRTWXLCG------ 200
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDT-------RDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
+G+G + ++ D + + LK + +SM EI++ R L H +V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 80
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F ND V+++ + +++ H+ KA L QI+ G
Sbjct: 81 GFHG-FFEDNDF-VFVVLELCRR--RSLLELHKRRKA------LTEPEARYYLRQIVLGC 130
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YLH N V+HRDLK N L + E +E VKI D G A + L T Y
Sbjct: 131 QYLHRNRVIHRDLKLGN-LFLNEDLE---VKIGDFGLATKVEYDGERKKTL---CGTPNY 183
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
APE +L + ++ +D+W+IGCI LL +P F C +E
Sbjct: 184 IAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 224
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 12 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 68
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 69 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 124
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 125 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 172
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 173 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 228 IPFEHDEEIIR 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 11 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 67
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 68 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 123
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 124 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 171
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 172 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 226
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 227 IPFEHDEEIIR 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 102
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 103 LVKLEYSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 150
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLID----QQGYIQVTDFGFAKRVKGRTWXLCG------ 200
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 103
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 104 LVKLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 151
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 201
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 103
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 104 LVKLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 151
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 201
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 12 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 68
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 69 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 124
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 125 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 172
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 173 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 228 IPFEHDEEIIR 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 103
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R ++ + QI
Sbjct: 104 LVKLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA----------QI 151
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 201
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 79 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 127
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP--LKPLADLDPVVVTFWY 199
L +HRDL N LV E VK+AD G +RL P P+ T
Sbjct: 128 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT--- 180
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L + K+ D+WA G + E+ T
Sbjct: 181 -APESLAYNKFSIKS-DVWAFGVLLWEIAT 208
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 12 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 68
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 69 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 124
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 125 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 172
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 173 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 228 IPFEHDEEIIR 238
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 39 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 95
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 96 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 151
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 152 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 199
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 200 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 255 IPFEHDEEIIR 265
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 80 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP--LKPLADLDPVVVTFWY 199
L +HRDL N LV E VK+AD G +RL P P+ T
Sbjct: 129 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT--- 181
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L + K+ D+WA G + E+ T
Sbjct: 182 -APESLAYNKFSIKS-DVWAFGVLLWEIAT 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 24 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 80
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 81 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 137 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 184
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 185 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 240 IPFEHDEEIIR 250
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 39 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 95
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 96 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 151
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 152 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 199
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 200 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 254
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 255 IPFEHDEEIIR 265
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + + + + LKQIE T E +L+ + P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 102
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +YA H+ + R ++ + QI
Sbjct: 103 LVKLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA----------QI 150
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+++ ++G +K+ D GFA+ L
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGFAKRVKGRTWXLCG------ 200
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDT-------RDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
+G+G + ++ D + + LK + +SM EI++ R L H +V+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM----EISIHRSLAHQHVV 84
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F ND V+++ + +++ H+ KA L QI+ G
Sbjct: 85 GFHG-FFEDNDF-VFVVLELCRR--RSLLELHKRRKA------LTEPEARYYLRQIVLGC 134
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YLH N V+HRDLK N L + E +E VKI D G A + L T Y
Sbjct: 135 QYLHRNRVIHRDLKLGN-LFLNEDLE---VKIGDFGLATKVEYDGERKKTL---CGTPNY 187
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH--CRQE 239
APE +L + ++ +D+W+IGCI LL +P F C +E
Sbjct: 188 IAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE 228
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 44 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 100
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 101 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 156
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 157 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 204
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 205 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 259
Query: 232 PIFHCRQEDIK 242
F +E I+
Sbjct: 260 IPFEHDEEIIR 270
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ N+ LK GT S E ++++LKH ++ L +V
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKP--GTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++ ++++ +Y ++ F + + + Q+ G+ Y+
Sbjct: 74 ---SEEPIYIVTEYMNKG--SLLDFLKDGEGRALKLPNLV----DMAAQVAAGMAYIERM 124
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV G G+ KIAD G ARL + + APE
Sbjct: 125 NYIHRDLRSANILV-GNGL---ICKIADFGLARLIED--NEXTARQGAKFPIKWTAPEAA 178
Query: 206 LGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL+T
Sbjct: 179 LYGRFTIKS-DVWSFGILLTELVT 201
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+++ ++G +K+ D GFA+ L
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGFAKRVKGRTWXLCG---- 201
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+++ ++G +K+ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+++ ++G +K+ D GFA+ L
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGFAKRVKGRTWXLCG---- 201
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+++ ++G +K+ D GFA+ L
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGFAKRVKGRTWXLCG---- 201
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWTLCG---- 201
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWTLCG---- 186
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 187 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIALLRELKHPNVINL 81
++G+G + V + + ++YA K I LS RE + R LKHPN++ L
Sbjct: 11 ELGKGAFSVVRRCMKIPTG--QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 82 ---ISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQ 134
IS H +L+FD +L+ I +++ A A+ + Q
Sbjct: 69 HDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASH------------CIQQ 111
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
IL+ +++ H N ++HRDLKP N+L+ + + VK+AD G A +
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKS-KGAAVKLADFGLAIEVQGDQQAWFGF---A 167
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
T Y +PE+L Y K +D+WA G I LL P F
Sbjct: 168 GTPGYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + K+ + + LKQIE T E +L+ + P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 95
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +Y H+ + R + + QI
Sbjct: 96 LVKLEFSF--KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA----------QI 143
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 193
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 194 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 21/210 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYAL---KQIEGTGLSMSACREIALLRELKHPNVIN 80
G +G GT+G V + + ++I + REI L+ +HP++I
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L V + D + + + +I K R + L QIL +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----------RLFQQILSAVD 125
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y H + V+HRDLKP N+L+ KIAD G + + ++ L + Y
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAH----MNAKIADFGLSNMMSDG----EFLRTSCGSPNYA 177
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTS 230
APE++ G + +DIW+ G I LL
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 201
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 24 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 80
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 81 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 137 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 184
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 185 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 240 IPFEHDEEII 249
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 25 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 81
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 82 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 138 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 185
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 186 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 241 IPFEHDEEII 250
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 25 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 81
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 82 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 138 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 185
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 186 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 241 IPFEHDEEII 250
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 24 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 80
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 81 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 137 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 184
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 185 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 240 IPFEHDEEII 249
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 29/217 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIALLRELKHPNVINL 81
++G+G + V + + ++YA K I LS RE + R LKHPN++ L
Sbjct: 11 ELGKGAFSVVRRCMKIPTG--QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+L+FD +L+ I +++ A A+ + QIL+
Sbjct: 69 HDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADAS------------HCIQQILE 114
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+++ H N ++HRDLKP N+L+ + + VK+AD G A + T
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKS-KGAAVKLADFGLAIEVQGDQQAWFGF---AGTP 170
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y +PE+L Y K +D+WA G I LL P F
Sbjct: 171 GYLSPEVLR-KDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 201
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 202 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 26 KVGRGTYGHVYKAR---RKDNSDTRDYALKQIE--GTGLSMSACREIALLR-ELKHPNVI 79
++G +G VYK T+ A+K ++ G R A+LR L+HPNV+
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL-------- 131
L+ V D+ + ++F Y H H R+ ++ +L
Sbjct: 93 CLLGVVT--KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR---------LFNN 182
+ QI G+ YL S+ V+H+DL N+LV ++ VKI+D+G R L N
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVY----DKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 183 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
L P+ + APE ++ + ++ DIW+ G + E+ +
Sbjct: 207 SLLPIR----------WMAPEAIMYGK-FSIDSDIWSYGVVLWEVFS 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 25 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 81
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 82 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 138 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 185
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 186 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 241 IPFEHDEEII 250
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 25 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 81
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 82 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 137
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 138 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 185
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 186 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 240
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 241 IPFEHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 106/250 (42%), Gaps = 38/250 (15%)
Query: 6 KIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIE---------- 55
K+ E+ +E + G +G G +G VY R SD A+K +E
Sbjct: 24 KLAPGKEKEPLESQYQV-GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGEL 80
Query: 56 --GTGLSMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFH 111
GT + M E+ LL+++ VI L+ F + + L DL+ I
Sbjct: 81 PNGTRVPM----EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER 136
Query: 112 RAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKI 171
A + S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+
Sbjct: 137 GALQEELAR---------SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKL 184
Query: 172 ADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 231
D G L + + D D V Y PE + R++ ++ +W++G + +++ +
Sbjct: 185 IDFGSGALLKDTV--YTDFDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 239
Query: 232 PIFHCRQEDI 241
F +E I
Sbjct: 240 IPFEHDEEII 249
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+L+ ++G +++ D GFA+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLI----DQQGYIQVTDFGFAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS-----MSACREIALLRELKHPNVINL 81
+G+G++G V ++ D + YA+K + + +E+ +++ L+HP ++NL
Sbjct: 23 IGKGSFGKVCIVQKNDTK--KMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
F D +F + L +++H + + +++ + Y
Sbjct: 81 WYSFQDEED-----MFMVVDLLLGGDLRYHLQQNVHFKEETVKL-----FICELVMALDY 130
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWY 199
L + ++HRD+KP NIL+ E G V I D A + + +A P Y
Sbjct: 131 LQNQRIIHRDMKPDNILL----DEHGHVHITDFNIAAMLPRETQITTMAGTKP------Y 180
Query: 200 RAPELLLGAR--HYTKAIDIWAIGCIFAELLTSEPIFHCR 237
APE+ + Y+ A+D W++G ELL +H R
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 26 KVGRGTYGHVYKAR---RKDNSDTRDYALKQIE--GTGLSMSACREIALLR-ELKHPNVI 79
++G +G VYK T+ A+K ++ G R A+LR L+HPNV+
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL-------- 131
L+ V D+ + ++F Y H H R+ ++ +L
Sbjct: 76 CLLGVVT--KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR---------LFNN 182
+ QI G+ YL S+ V+H+DL N+LV ++ VKI+D+G R L N
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVY----DKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 183 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
L P+ + APE ++ + ++ DIW+ G + E+ +
Sbjct: 190 SLLPIR----------WMAPEAIMYGK-FSIDSDIWSYGVVLWEVFS 225
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDXX 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 80/211 (37%), Gaps = 23/211 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD-----YALKQIEGTGLSMSACREIALLRELKHPNVINL 81
+G G +G V R D +LK G +EI +LR L H N++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ + L+ ++ K N QI G+ Y
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL-------KYAVQICKGMDY 141
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLA---DLDPVVVTFW 198
L S +HRDL N+LV E +VKI D G + + D D V FW
Sbjct: 142 LGSRQYVHRDLAARNVLVESE----HQVKIGDFGLTKAIETDKEXXTVKDDRDSPV--FW 195
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
Y APE L+ ++ Y A D+W+ G ELLT
Sbjct: 196 Y-APECLMQSKFYI-ASDVWSFGVTLHELLT 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 85/210 (40%), Gaps = 21/210 (10%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYAL---KQIEGTGLSMSACREIALLRELKHPNVIN 80
G +G GT+G V + + ++I + REI L+ +HP++I
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L V + D + + + +I K R + L QIL +
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR----------RLFQQILSAVD 125
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
Y H + V+HRDLKP N+L+ KIAD G + + ++ L + Y
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAH----MNAKIADFGLSNMMSDG----EFLRDSCGSPNYA 177
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLTS 230
APE++ G + +DIW+ G I LL
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 80/211 (37%), Gaps = 23/211 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD-----YALKQIEGTGLSMSACREIALLRELKHPNVINL 81
+G G +G V R D +LK G +EI +LR L H N++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ + L+ ++ K N QI G+ Y
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV-------QICKGMDY 129
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLA---DLDPVVVTFW 198
L S +HRDL N+LV E +VKI D G + + D D V FW
Sbjct: 130 LGSRQYVHRDLAARNVLVESE----HQVKIGDFGLTKAIETDKEXXTVKDDRDSPV--FW 183
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
Y APE L+ ++ Y A D+W+ G ELLT
Sbjct: 184 Y-APECLMQSKFYI-ASDVWSFGVTLHELLT 212
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDXX 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS--------MSACREIALLRELKH 75
G +G G +G VY R SD A+K +E +S E+ LL+++
Sbjct: 13 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 76 --PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
VI L+ F + + L DL+ I A + S +
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------SFFW 121
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D D
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTDFDGT 176
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 177 RV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 27 VGRGTYGHVYKARRKDNSD---------TRDYALKQIEGTGLSMSACREIALLRELKHPN 77
+G G++G V + + + + LKQIE T E +L+ + P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT------LNEKRILQAVNFPF 102
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQI 135
++ L F ++ ++++ +YA H+ + R ++ + QI
Sbjct: 103 LVKLEFSF--KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA----------QI 150
Query: 136 LDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVV 195
+ YLHS +++RDLKP N+++ ++G +++ D GFA+ L
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI----DQQGYIQVTDFGFAKRVKGRTWXLCG------ 200
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS--------MSACREIALLRELKH 75
G +G G +G VY R SD A+K +E +S E+ LL+++
Sbjct: 9 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 76 --PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
VI L+ F + + L DL+ I A + S +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------SFFW 117
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D D
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTDFDGT 172
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 173 RV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIE------------GTGLSMSACREIALLR 71
G +G G +G VY R SD A+K +E GT + M E+ LL+
Sbjct: 14 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPM----EVVLLK 67
Query: 72 ELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
++ VI L+ F + + L DL+ I A +
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--------- 118
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTD 173
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 174 FDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDT-RDYALKQIE------GTGLSMSAC-REIALLRE 72
YE C+V G+G + V RR N +T + +A+K ++ GLS RE ++
Sbjct: 26 YELCEVIGKGPFSVV---RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-HDL-WHIIKFHRAAKANXXXXXXXXXXXXS 130
LKHP+++ L+ + S D ++++F++ + DL + I+K A
Sbjct: 83 LKHPHIVELLETYSS--DGMLYMVFEFMDGADLCFEIVKRADAG------FVYSEAVASH 134
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLAD 189
+ QIL+ + Y H N ++HRD+KP +L+ + VK+ G A +L + L
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKE-NSAPVKLGGFGVAIQLGESGLVAGGR 193
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
V T + APE ++ Y K +D+W G I LL+ F+ +E
Sbjct: 194 ----VGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIE------------GTGLSMSACREIALLR 71
G +G G +G VY R SD A+K +E GT + M E+ LL+
Sbjct: 14 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPM----EVVLLK 67
Query: 72 ELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
++ VI L+ F + + L DL+ I A +
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--------- 118
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTD 173
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 174 FDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 32/239 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYA------LKQIEGTGLSMSACREIALLRELKHPNVIN 80
+G G +G V++AR + LK+ + RE AL+ E +PN++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 81 LISVFLSHNDRKVWLLFDYAEH----------------DLWHIIKFHRAAKANXXXXXXX 124
L+ V + + LLF+Y + L H RA ++
Sbjct: 115 LLGV--CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+ Q+ G+ YL +HRDL N LV GE + VKIAD G +R +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-GENMV---VKIADFGLSRNIYSAD 228
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS--EPIFHCRQEDI 241
AD + + W PE + R YT D+WA G + E+ + +P + E++
Sbjct: 229 YYKADGNDAIPIRWM-PPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIE------------GTGLSMSACREIALLR 71
G +G G +G VY R SD A+K +E GT + M E+ LL+
Sbjct: 36 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPM----EVVLLK 89
Query: 72 ELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
++ VI L+ F + + L DL+ I A +
Sbjct: 90 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--------- 140
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D
Sbjct: 141 SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTD 195
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 196 FDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 245
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIE------------GTGLSMSACREIALLR 71
G +G G +G VY R SD A+K +E GT + M E+ LL+
Sbjct: 14 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPM----EVVLLK 67
Query: 72 ELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
++ VI L+ F + + L DL+ I A +
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--------- 118
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTD 173
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 174 FDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 223
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS--------MSACREIALLRELKH 75
G +G G +G VY R SD A+K +E +S E+ LL+++
Sbjct: 12 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 76 --PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
VI L+ F + + L DL+ I A + S +
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------SFFW 120
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D D
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTDFDGT 175
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 176 RV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+G+G +G VY D + R +L +I + RE L+R L HPNV+ LI
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L LL DL ++F R+ + N S Q+ G+ YL
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDL---LQFIRSPQRN-----PTVKDLISFGLQVARGMEYL 140
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
+HRDL N ++ E VK+AD G AR + + + + + A
Sbjct: 141 AEQKFVHRDLAARNCML----DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L R TK+ D+W+ G + ELLT
Sbjct: 197 LESLQTYRFTTKS-DVWSFGVLLWELLT 223
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS--------MSACREIALLRELKH 75
G +G G +G VY R SD A+K +E +S E+ LL+++
Sbjct: 9 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 76 --PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
VI L+ F + + L DL+ I A + S +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------SFFW 117
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D D
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTDFDGT 172
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 173 RV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 218
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 22 YEGCKV-GRGTYGHVYKARRKDNSDT-RDYALKQIE------GTGLSMSAC-REIALLRE 72
YE C+V G+G + V RR N +T + +A+K ++ GLS RE ++
Sbjct: 28 YELCEVIGKGPFSVV---RRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 84
Query: 73 LKHPNVINLISVFLSHNDRKVWLLFDYAE-HDL-WHIIKFHRAAKANXXXXXXXXXXXXS 130
LKHP+++ L+ + S D ++++F++ + DL + I+K A
Sbjct: 85 LKHPHIVELLETYSS--DGMLYMVFEFMDGADLCFEIVKRADAG------FVYSEAVASH 136
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLAD 189
+ QIL+ + Y H N ++HRD+KP +L+ + VK+ G A +L + L
Sbjct: 137 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKE-NSAPVKLGGFGVAIQLGESGLVAGGR 195
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
V T + APE ++ Y K +D+W G I LL+ F+ +E
Sbjct: 196 ----VGTPHFMAPE-VVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVIEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEXTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 76 --CTREPPFYIIIEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 124
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL + + A
Sbjct: 125 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTA 178
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 179 PESLAYNKFSIKS-DVWAFGVLLWEIAT 205
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 166 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTSH----NSL 220
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 221 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 172 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTSH----NSL 226
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 227 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 270
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 48/231 (20%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALK--------QIEGTGLSMSACREIALLRELKHPNV 78
+G+G++G V A RK + YA+K Q + +M R +ALL K P +
Sbjct: 27 LGKGSFGKVMLADRKGTEEL--YAIKILKKDVVIQDDDVECTMVEKRVLALLD--KPPFL 82
Query: 79 INLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--Q 134
L S F + + +++ + +Y ++HI + + + ++ Y +
Sbjct: 83 TQLHSCFQTVD--RLYFVMEYVNGGDLMYHIQQVGKFKEPQ------------AVFYAAE 128
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
I G+ +LH +++RDLK N+++ EG +KIAD G + +D V
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEG----HIKIADFGMCKEHM--------MDGVT 176
Query: 195 V-----TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
T Y APE++ + Y K++D WA G + E+L +P F ED
Sbjct: 177 TREFCGTPDYIAPEII-AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 128 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 182
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 183 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 226
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 176
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 177 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 30/222 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALK--------QIEGTGLSMSACREIALLRELKHPNV 78
+G+G++G V AR K+ D YA+K Q + +M+ R ++L R HP +
Sbjct: 31 LGKGSFGKVMLARVKETGDL--YAVKVLKKDVILQDDDVECTMTEKRILSLAR--NHPFL 86
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F + + + F ++HI K R +A +I+
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA----------EIISA 136
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ +LH +++RDLK N+L+ E G K+AD G + + T
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHE----GHCKLADFGMCK---EGICNGVTTATFCGTPD 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
Y APE +L Y A+D WA+G + E+L F ED
Sbjct: 190 YIAPE-ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED 230
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 127 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 181
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 182 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 126 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 180
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 181 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 79 --CTREPPFYIIIEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 127
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 128 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKW-TA 181
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 182 PESLAYNKFSIKS-DVWAFGVLLWEIAT 208
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 176
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 177 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVIEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 174
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 175 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 3 YEFKIKTSN--ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDT--RDYALKQIEGTG 58
YE K T+N ER G K+G G +G VYK + + + A+ I
Sbjct: 18 YELKNVTNNFDERP-----ISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 59 LSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH----------DLWHII 108
L +EI ++ + +H N++ L+ S + + L++ Y + D +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLG--FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 109 KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGR 168
+H K + +GI++LH N +HRD+K ANIL+ E
Sbjct: 131 SWHMRCK---------------IAQGAANGINFLHENHHIHRDIKSANILL----DEAFT 171
Query: 169 VKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
KI+D G AR + +V T Y APE L G T DI++ G + E++
Sbjct: 172 AKISDFGLARA-SEKFAQTVMXSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEII 228
Query: 229 TSEP 232
T P
Sbjct: 229 TGLP 232
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 149 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 205 LESLQTQKFTTKS-DVWSFGVLLWELMT 231
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVMEYMSKGC--LLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 121 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 175
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 176 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 219
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 78 --CTREPPFYIIIEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 127 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 180
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 181 PESLAYNKFSIKS-DVWAFGVLLWEIAT 207
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 136 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 190
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 191 TTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIE------------GTGLSMSACREIALLR 71
G +G G +G VY R SD A+K +E GT + M E+ LL+
Sbjct: 13 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPM----EVVLLK 66
Query: 72 ELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXX 129
++ VI L+ F + + L DL+ I A +
Sbjct: 67 KVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR--------- 117
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTD 172
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 173 FDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 222
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 120 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSL 174
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 175 TEPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 218
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 78 --CTREPPFYIIIEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 127 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 180
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 181 PESLAYNKFSIKS-DVWAFGVLLWEIAT 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 18 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 75 V---SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRLPQLV----DMAAQIASGMAYVER 125
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 126 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 179
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 180 ALYGRFTIKS-DVWSFGILLTELTT 203
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 83 --CTREPPFYIIIEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 131
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 132 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 185
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 186 PESLAYNKFSIKS-DVWAFGVLLWEIAT 212
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 191 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 248 V---SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRLPQLV----DMAAQIASGMAYVER 298
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 299 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 352
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 353 ALYGRFTIKS-DVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 191 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 248 V---SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRLPQLV----DMAAQIASGMAYVER 298
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 299 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 352
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 353 ALYGRFTIKS-DVWSFGILLTELTT 376
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I G+ LH +++RDLKP NIL+ + G ++I+D+G A +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEG----QTIKGR 345
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
V T Y APE++ R YT + D WA+GC+ E++ + F R++ IK
Sbjct: 346 VGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 393
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS--------MSACREIALLRELKH 75
G +G G +G VY R SD A+K +E +S E+ LL+++
Sbjct: 9 GPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 76 --PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
VI L+ F + + L DL+ I A + S +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR---------SFFW 117
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D D
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTDFDGT 172
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI 241
V Y PE + R++ ++ +W++G + +++ + F +E I
Sbjct: 173 RV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 148 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 204 LESLQTQKFTTKS-DVWSFGVLLWELMT 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 3 YEFKIKTSN--ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDT--RDYALKQIEGTG 58
YE K T+N ER G K+G G +G VYK + + + A+ I
Sbjct: 18 YELKNVTNNFDERP-----ISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 59 LSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH----------DLWHII 108
L +EI ++ + +H N++ L+ S + + L++ Y + D +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLG--FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 109 KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGR 168
+H K + +GI++LH N +HRD+K ANIL+ E
Sbjct: 131 SWHMRCK---------------IAQGAANGINFLHENHHIHRDIKSANILL----DEAFT 171
Query: 169 VKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
KI+D G AR + +V T Y APE L G T DI++ G + E++
Sbjct: 172 AKISDFGLARA-SEKFAQTVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEII 228
Query: 229 TSEP 232
T P
Sbjct: 229 TGLP 232
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+++ ++G +K+ D G A+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI----DQQGYIKVTDFGLAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 76 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 124
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL + A
Sbjct: 125 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTG--DTFTAHAGAKFPIKWTA 178
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 179 PESLAYNKFSIKS-DVWAFGVLLWEIAT 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I G+ LH +++RDLKP NIL+ + G ++I+D+G A +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL----DDHGHIRISDLGLAVHVPEG----QTIKGR 345
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
V T Y APE++ R YT + D WA+GC+ E++ + F R++ IK
Sbjct: 346 VGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 393
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 43/244 (17%)
Query: 3 YEFKIKTSN--ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDT--RDYALKQIEGTG 58
YE K T+N ER G K+G G +G VYK + + + A+ I
Sbjct: 12 YELKNVTNNFDERP-----ISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 59 LSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH----------DLWHII 108
L +EI ++ + +H N++ L+ S + + L++ Y + D +
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLG--FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 109 KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGR 168
+H K + +GI++LH N +HRD+K ANIL+ E
Sbjct: 125 SWHMRCK---------------IAQGAANGINFLHENHHIHRDIKSANILL----DEAFT 165
Query: 169 VKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
KI+D G AR + +V T Y APE L G T DI++ G + E++
Sbjct: 166 AKISDFGLARA-SEKFAQXVMXXRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEII 222
Query: 229 TSEP 232
T P
Sbjct: 223 TGLP 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 16 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 73 V---SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 123
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 124 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 177
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 178 ALYGRFTIKS-DVWSFGILLTELTT 201
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVCEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 8 KTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALK---QIEGTGLSMSA 63
K + R K ED YE KV GRG +G V R K S + YA+K + E S SA
Sbjct: 65 KIRDLRMKAED---YEVVKVIGRGAFGEVQLVRHK--STRKVYAMKLLSKFEMIKRSDSA 119
Query: 64 C--REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXX 120
E ++ P V+ L F +DR ++++ +Y DL +++ +N
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNLM-------SNYDV 170
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
+ + LD IH S +HRD+KP N+L+ + G +K+AD G
Sbjct: 171 PEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKM 223
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLL---GARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
N + + D V T Y +PE+L G +Y + D W++G E+L + F+
Sbjct: 224 NK--EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 145 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 201 LESLQTQKFTTKS-DVWSFGVLLWELMT 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 8 KTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALK---QIEGTGLSMSA 63
K + R K ED YE KV GRG +G V R K S + YA+K + E S SA
Sbjct: 60 KIRDLRMKAED---YEVVKVIGRGAFGEVQLVRHK--STRKVYAMKLLSKFEMIKRSDSA 114
Query: 64 C--REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXX 120
E ++ P V+ L F +DR ++++ +Y DL +++ +N
Sbjct: 115 FFWEERDIMAFANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNLM-------SNYDV 165
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
+ + LD IH S +HRD+KP N+L+ + G +K+AD G
Sbjct: 166 PEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKM 218
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLL---GARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
N + + D V T Y +PE+L G +Y + D W++G E+L + F+
Sbjct: 219 NK--EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 22 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 79 V---SEEPIYIVTEYMNKG--SLLDFLKGETGKYLRLPQLV----DMSAQIASGMAYVER 129
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 130 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 183
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 184 ALYGRFTIKS-DVWSFGILLTELTT 207
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 8 KTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRDYALK---QIEGTGLSMSA 63
K + R K ED YE KV GRG +G V R K S + YA+K + E S SA
Sbjct: 65 KIRDLRMKAED---YEVVKVIGRGAFGEVQLVRHK--STRKVYAMKLLSKFEMIKRSDSA 119
Query: 64 C--REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXX 120
E ++ P V+ L F +DR ++++ +Y DL +++ +N
Sbjct: 120 FFWEERDIMAFANSPWVVQLFYAF--QDDRYLYMVMEYMPGGDLVNLM-------SNYDV 170
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
+ + LD IH S +HRD+KP N+L+ + G +K+AD G
Sbjct: 171 PEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLL----DKSGHLKLADFGTCMKM 223
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLL---GARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
N + + D V T Y +PE+L G +Y + D W++G E+L + F+
Sbjct: 224 NK--EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 83 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 131
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 132 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTX-TAHAGAKFPIKW-TA 185
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 186 PESLAYNKFSIKS-DVWAFGVLLWEIAT 212
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 150 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 206 LESLQTQKFTTKS-DVWSFGVLLWELMT 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 150 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 206 LESLQTQKFTTKS-DVWSFGVLLWELMT 232
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 191 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 248 V---SEEPIYIVGEYMSKG--SLLDFLKGETGKYLRLPQLV----DMAAQIASGMAYVER 298
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 299 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 352
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 353 ALYGRFTIKS-DVWSFGILLTELTT 376
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 14 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 71 V---SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 121
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 122 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 175
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 176 ALYGRFTIKS-DVWSFGILLTELTT 199
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 50 ALKQIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-HDLWHII 108
ALK+ G L REI +LR L H +++ ++ V L+ +Y L +
Sbjct: 44 ALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 103
Query: 109 KFHRAAKANXXXXXXXXXXXXSLLY--QILDGIHYLHSNWVLHRDLKPANILVMGEGIER 166
H A LL+ QI +G+ YLH+ +HR L N+L+ + +
Sbjct: 104 PRHCVGLAQL------------LLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-- 149
Query: 167 GRVKIADMGFARLF---NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 223
VKI D G A+ + + D D V FWY APE L + Y A D+W+ G
Sbjct: 150 --VKIGDFGLAKAVPEGHEYYRVREDGDSPV--FWY-APECLKECKFYY-ASDVWSFGVT 203
Query: 224 FAELLT 229
ELLT
Sbjct: 204 LYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 50 ALKQIEGTGLSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-HDLWHII 108
ALK+ G L REI +LR L H +++ ++ V L+ +Y L +
Sbjct: 45 ALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL 104
Query: 109 KFHRAAKANXXXXXXXXXXXXSLLY--QILDGIHYLHSNWVLHRDLKPANILVMGEGIER 166
H A LL+ QI +G+ YLH+ +HR L N+L+ + +
Sbjct: 105 PRHCVGLAQL------------LLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL-- 150
Query: 167 GRVKIADMGFARLF---NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI 223
VKI D G A+ + + D D V FWY APE L + Y A D+W+ G
Sbjct: 151 --VKIGDFGLAKAVPEGHEYYRVREDGDSPV--FWY-APECLKECKFYY-ASDVWSFGVT 204
Query: 224 FAELLT 229
ELLT
Sbjct: 205 LYELLT 210
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
Query: 7 IKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMS-- 62
+K +E+ D +E KV G+G++G V+ R+ D+ YA+K ++ L +
Sbjct: 18 VKAGSEKA---DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 63 --ACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX 119
E +L ++ HP V+ L F + K++L+ D+ DL F R +K
Sbjct: 75 VRTKMERDILADVNHPFVVKLHYAF--QTEGKLYLILDFLRGGDL-----FTRLSKE--- 124
Query: 120 XXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARL 179
L ++ G+ +LHS +++RDLKP NIL+ E G +K+ D G ++
Sbjct: 125 -VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL----DEEGHIKLTDFGLSKE 179
Query: 180 FNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 237
+ K T Y APE ++ + ++ + D W+ G + E+LT F +
Sbjct: 180 AIDHEKKAYSF---CGTVEYMAPE-VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGK 233
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN +
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINN-IDY 212
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + + APE L R YT D+W+ G + E+ T
Sbjct: 213 YKNTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 78 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 127 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 180
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 181 PESLAYNKFSIKS-DVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 78 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 127 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 180
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 181 PESLAYNKFSIKS-DVWAFGVLLWEIAT 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 83 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 131
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 132 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 185
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 186 PESLAYNKFSIKS-DVWAFGVLLWEIAT 212
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 149 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 205 LESLQTQKFTTKS-DVWSFGVLLWELMT 231
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 43/244 (17%)
Query: 3 YEFKIKTSN--ERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDT--RDYALKQIEGTG 58
YE K T+N ER G K G G +G VYK + + + A+ I
Sbjct: 9 YELKNVTNNFDERP-----ISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 59 LSMSACREIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH----------DLWHII 108
L +EI + + +H N++ L+ S + + L++ Y + D +
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLG--FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 109 KFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGR 168
+H K + +GI++LH N +HRD+K ANIL+ E
Sbjct: 122 SWHXRCK---------------IAQGAANGINFLHENHHIHRDIKSANILLD----EAFT 162
Query: 169 VKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
KI+D G AR + +V T Y APE L G T DI++ G + E++
Sbjct: 163 AKISDFGLARA-SEKFAQXVXXSRIVGTTAYXAPEALRG--EITPKSDIYSFGVVLLEII 219
Query: 229 TSEP 232
T P
Sbjct: 220 TGLP 223
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 168 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 224 LESLQTQKFTTKS-DVWSFGVLLWELMT 250
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 22 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 79 V---SEEPIYIVTEYMNKG--SLLDFLKGETGKYLRLPQLV----DMSAQIASGMAYVER 129
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 130 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEWTARQGAKFPIKWTAPEA 183
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 184 ALYGRFTIKS-DVWSFGILLTELTT 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVTEYMSKGC--LLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 151 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 207 LESLQTQKFTTKS-DVWSFGVLLWELMT 233
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 147 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 203 LESLQTQKFTTKS-DVWSFGVLLWELMT 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 150 ASKKFVHRDLAARNCMLD----EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 206 LESLQTQKFTTKS-DVWSFGVLLWELMT 232
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 91 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 139
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 140 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 193
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 194 PESLAYNKFSIKS-DVWAFGVLLWEIAT 220
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 142 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 198 LESLQTQKFTTKS-DVWSFGVLLWELMT 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 150 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 206 LESLQTQKFTTKS-DVWSFGVLLWELMT 232
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 83 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 131
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 132 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 185
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 186 PESLAYNKFSIKS-DVWAFGVLLWEIAT 212
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANIL-VMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
+ YQI +++LHSN + H DLKP NIL V + E KI R NP + D
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--ERTLINPDIKVVD 180
Query: 190 L----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+V T YRAPE++L A +++ D+W+IGCI E +F
Sbjct: 181 FGSATYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 83 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 131
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 132 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 185
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 186 PESLAYNKFSIKS-DVWAFGVLLWEIAT 212
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 87 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLV----TENNVMKIADFGLARDINNIDYY 200
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 201 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 89 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 202
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 203 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ YL
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 169 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 225 LESLQTQKFTTKS-DVWSFGVLLWELMT 251
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 92 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 205
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 206 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 246
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 148 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 204 LESLQTQKFTTKS-DVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 155 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 211 LESLQTQKFTTKS-DVWSFGVLLWELMT 237
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 274 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 331 V---SEEPIYIVTEYMSKG--SLLDFLKGETGKYLRLPQLV----DMAAQIASGMAYVER 381
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 382 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 435
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 436 ALYGRFTIKS-DVWSFGILLTELTT 459
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL-------SMSACREIALLRELKHPNVI 79
+G+G++G V AR K ++ YA+K ++ + + + R + LL+ +KHP ++
Sbjct: 46 IGKGSFGKVLLARHK--AEEVFYAVKVLQKKAILKKKEEKHIMSERNV-LLKNVKHPFLV 102
Query: 80 NLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F + + K++ + DY +L++ ++ R +I
Sbjct: 103 GLHFSFQTAD--KLYFVLDYINGGELFYHLQRERCFLEPRARFYAA---------EIASA 151
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ YLHS +++RDLKP NIL+ + G + + D G + ++ + T
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQ----GHIVLTDFGLCK---ENIEHNSTTSTFCGTPE 204
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
Y APE +L + Y + +D W +G + E+L P F+ R
Sbjct: 205 YLAPE-VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 80 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 129 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 182
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 183 PESLAYNKFSIKS-DVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 80 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 128
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 129 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 182
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 183 PESLAYNKFSIKS-DVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 82 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 130
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 131 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 184
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 185 PESLAYNKFSIKS-DVWAFGVLLWEIAT 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 25 CKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVINLIS 83
++G G++G VYK K + D LK ++ T A R E+A+LR+ +H N++
Sbjct: 42 TRIGSGSFGTVYKG--KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL---- 95
Query: 84 VFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD------ 137
L Y D I+ + + + ++Q++D
Sbjct: 96 -----------LFMGYMTKDNLAIVT--QWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 138 -GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVT 196
G+ YLH+ ++HRD+K NI + EG+ VKI D G A + + P
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIF-LHEGLT---VKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 197 FWYRAPELLLGARH--YTKAIDIWAIGCIFAELLTSE-PIFHCRQED 240
W APE++ + ++ D+++ G + EL+T E P H D
Sbjct: 199 LWM-APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 78 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 127 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 180
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 181 PESLAYNKFSIKS-DVWAFGVLLWEIAT 207
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR +++ + + + + A
Sbjct: 209 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 265 LESLQTQKFTTKS-DVWSFGVLLWELMT 291
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 146 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 259
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 260 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 300
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI--EGTGLSMSACREIALLRELKHPNVINLIS 83
K+G G + +V + D YALK+I A RE + R HPN++ L++
Sbjct: 36 KLGEGGFSYVDLV--EGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 84 VFLSHNDRK--VWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L K WLL + + LW+ I+ + LL I G+
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIE-----RLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF---NNPLKPLADLDPVVVTF 197
+H+ HRDLKP NIL+ EG + + + M A + + L D T
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEG-QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 198 WYRAPELLLGARHYT--KAIDIWAIGCIFAELLTSE 231
YRAPEL H + D+W++GC+ ++ E
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 78 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 126
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL + + A
Sbjct: 127 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK--WTA 180
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 181 PESLAYNKFSIKS-DVWAFGVLLWEIAT 207
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADL 190
++ I I +LHS+ + HRD+KP N+L + + +K+ D GFA+ L
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE-KDAVLKLTDFGFAKETTQ-----NAL 167
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 168 QTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 211
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRV-KIADMGFARLFNNPLKPLAD 189
++ I I +LHS+ + HRD+KP N+L + E+ V K+ D GFA+
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK--EKDAVLKLTDFGFAKETTQ-----NA 185
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
L T +Y APE +LG Y K+ D+W++G I LL P F+
Sbjct: 186 LQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 230
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++++H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 25 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 82 V---SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 132
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL ANILV GE + K+AD G ARL + + APE
Sbjct: 133 MNYVHRDLAAANILV-GENL---VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEA 186
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 187 ALYGRFTIKS-DVWSFGILLTELTT 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G +G VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 76 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 124
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL + + A
Sbjct: 125 LEKKNFIHRDLAARNCLVG----ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK--WTA 178
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 179 PESLAYNKFSIKS-DVWAFGVLLWEIAT 205
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 15 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ + ++ +Y ++ F + + QI G+ Y+
Sbjct: 72 V---SEEPIXIVTEYMSKG--SLLDFLKGETGKYLRLPQLV----DMAAQIASGMAYVER 122
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G ARL + + APE
Sbjct: 123 MNYVHRDLRAANILV-GENL---VCKVADFGLARLIED--NEXTARQGAKFPIKWTAPEA 176
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 177 ALYGRFTIKS-DVWSFGILLTELTT 200
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIALLRELKHPNVINL 81
++G+G + V + + ++YA K I LS RE + R LKHPN++ L
Sbjct: 29 ELGKGAFSVVRRCVKVLAG--QEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 86
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+L+FD +L+ I +++ A A+ + QIL+
Sbjct: 87 HDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEADAS------------HCIQQILE 132
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+ + H V+HRDLKP N+L + ++ VK+AD G A + T
Sbjct: 133 AVLHCHQMGVVHRDLKPENLL-LASKLKGAAVKLADFGLAIEVEGEQQAWFGF---AGTP 188
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y +PE+L Y K +D+WA G I LL P F
Sbjct: 189 GYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
QI+ YLHS +++RDLKP N+++ ++G +++ D G A+ L
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMI----DQQGYIQVTDFGLAKRVKGRTWXLCG---- 200
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
T Y APE++L ++ Y KA+D WA+G + E+ P F Q
Sbjct: 201 --TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E ++IAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMRIADFGLARDINNIDYY 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA---RLFNNPLKPLADL 190
QI+ G+ +LH +++RDLKP N+L+ + G V+I+D+G A + K A
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAGQTKTKGYAG- 351
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
T + APELLLG Y ++D +A+G E++ + F R E ++
Sbjct: 352 -----TPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY----ALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+GRG +G VY DN + + +L +I G E ++++ HPNV++L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ L + +L DL + I+ Q+ G+ +L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIR--------NETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLDPVVVTFWYRA 201
S +HRDL N ++ E+ VK+AD G AR + + + + + + A
Sbjct: 151 ASKKFVHRDLAARNCML----DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E L + TK+ D+W+ G + EL+T
Sbjct: 207 LESLQTQKFTTKS-DVWSFGVLLWELMT 233
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
I + I YLHS + HRD+KP N+L + +K+ D GFA+ + L
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS----HNSLTTPC 224
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T +Y APE +LG Y K+ D W++G I LL P F+
Sbjct: 225 YTPYYVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFY 264
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA---RLFNNPLKPLADL 190
QI+ G+ +LH +++RDLKP N+L+ + G V+I+D+G A + K A
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAGQTKTKGYAG- 351
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
T + APELLLG Y ++D +A+G E++ + F R E ++
Sbjct: 352 -----TPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA---RLFNNPLKPLADL 190
QI+ G+ +LH +++RDLKP N+L+ + G V+I+D+G A + K A
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAGQTKTKGYAG- 351
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
T + APELLLG Y ++D +A+G E++ + F R E ++
Sbjct: 352 -----TPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA---RLFNNPLKPLADL 190
QI+ G+ +LH +++RDLKP N+L+ + G V+I+D+G A + K A
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL----DDDGNVRISDLGLAVELKAGQTKTKGYAG- 351
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
T + APELLLG Y ++D +A+G E++ + F R E ++
Sbjct: 352 -----TPGFMAPELLLG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+INL+ D ++++ YA +L ++ R
Sbjct: 100 HKNIINLLGA--CTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G+G +G V+ N TR A+K ++ +S A +E ++++L+H ++ L +V
Sbjct: 192 KLGQGCFGEVWMGTW--NGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
++ ++++ +Y ++ F + + QI G+ Y+
Sbjct: 249 V---SEEPIYIVTEYMSKG--SLLDFLKGEMGKYLRLPQLV----DMAAQIASGMAYVER 299
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
+HRDL+ ANILV GE + K+AD G RL + + APE
Sbjct: 300 MNYVHRDLRAANILV-GENL---VCKVADFGLGRLIED--NEYTARQGAKFPIKWTAPEA 353
Query: 205 LLGARHYTKAIDIWAIGCIFAELLT 229
L R K+ D+W+ G + EL T
Sbjct: 354 ALYGRFTIKS-DVWSFGILLTELTT 377
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-----LLRELKHPNVINL 81
+G G +G V KAR K + D A+K+++ S R+ A L + HPN+INL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAK----------ANXXXXXXXXXXXXSL 131
+ + ++L +YA H +++ F R ++ AN
Sbjct: 92 LGA--CEHRGYLYLAIEYAPHG--NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
+ G+ YL +HRDL NILV E KIAD G +R +K
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVG----ENYVAKIADFGLSRGQEVYVKKTMGRL 203
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
PV W L YT D+W+ G + E+++ +C
Sbjct: 204 PVR---WMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYC 243
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-----LLRELKHPNVINL 81
+G G +G V KAR K + D A+K+++ S R+ A L + HPN+INL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAK----------ANXXXXXXXXXXXXSL 131
+ + ++L +YA H +++ F R ++ AN
Sbjct: 82 LGA--CEHRGYLYLAIEYAPHG--NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
+ G+ YL +HRDL NILV E KIAD G +R +K
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVG----ENYVAKIADFGLSRGQEVYVKKTMGRL 193
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
PV W L YT D+W+ G + E+++ +C
Sbjct: 194 PVR---WMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYC 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V K + + + L +E + RE+ +L E P ++
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F S + + + EH D + + + AK + +L G+ YL
Sbjct: 83 FYSDGEISICM-----EHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLR 131
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y AP
Sbjct: 132 EKHQIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMAP 182
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G EL
Sbjct: 183 ERLQGT-HYSVQSDIWSMGLSLVEL 206
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 92 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDX 205
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 206 XKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 84 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 134
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 135 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 187
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 236
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 78 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 128
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 129 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 181
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDY--ALKQIEGTGLS---MSACREIALLRELKHPNVINL 81
+G G +G VYK K +S ++ A+K ++ + E ++ + H N+I L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V + + + ++ +Y E+ + KF R +L I G+ Y
Sbjct: 112 EGVISKY--KPMMIITEYMENG--ALDKFLREKDGEFSVLQLV-----GMLRGIAAGMKY 162
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L + +HRDL NILV + K++D G +R+ + + + + A
Sbjct: 163 LANMNYVHRDLAARNILVNSNLV----CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE + R +T A D+W+ G + E++T
Sbjct: 219 PE-AISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFN--------- 181
+ QI + + +LHS ++HRDLKP+NI + + VK+ D G +
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV----VKVGDFGLVTAMDQDEEEQTVL 224
Query: 182 NPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
P+ A V T Y +PE + G +Y+ +DI+++G I ELL S
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYS 272
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 19 LFDYEGCK-VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS---ACREIALLRELK 74
L D+E + +GRG +G V++A+ K D +YA+K+I ++ RE+ L +L+
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNK--VDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 62
Query: 75 HPNVINLISVFLSHNDRK 92
HP ++ + +L K
Sbjct: 63 HPGIVRYFNAWLETPPEK 80
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 87 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 137
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 138 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 190
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 239
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 86 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 136
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 137 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 189
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 238
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+I L+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIITLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 112 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 161
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G AR+ + + + +
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 218 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 11 NERTKVEDLFDYEGCKV---GRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACRE 66
++ KV +L D + K+ G G G V+K K + L +E + RE
Sbjct: 57 TQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE 116
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXX 125
+ +L E P ++ F ++D ++ + ++ + L ++K +A +
Sbjct: 117 LQVLHECNSPYIVGFYGAF--YSDGEISICMEHMDGGSLDQVLK--KAGR-------IPE 165
Query: 126 XXXXSLLYQILDGIHYL-HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+ ++ G+ YL + ++HRD+KP+NILV RG +K+ D G + + +
Sbjct: 166 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSM 221
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 227
+ V T Y +PE L G HY+ DIW++G E+
Sbjct: 222 A-----NSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEM 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 11 NERTKVEDLFDYEGCKV---GRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACRE 66
++ KV +L D + K+ G G G V+K K + L +E + RE
Sbjct: 22 TQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE 81
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXX 125
+ +L E P ++ F ++D ++ + ++ + L ++K KA
Sbjct: 82 LQVLHECNSPYIVGFYGAF--YSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILG 134
Query: 126 XXXXSLLYQILDGIHYL-HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+ ++ G+ YL + ++HRD+KP+NILV RG +K+ D G + + +
Sbjct: 135 KVSIA----VIKGLTYLREKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSM 186
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 227
+ V T Y +PE L G HY+ DIW++G E+
Sbjct: 187 A-----NSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEM 223
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 78 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 128
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 129 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 181
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 80 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 130
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 131 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 183
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 232
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 83 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 133
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 134 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-A 186
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 235
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 79 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 129
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 130 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-A 182
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 231
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 88 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 138
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 139 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-A 191
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 240
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 84 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 134
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 135 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-A 187
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 236
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANIL-VMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
+ YQI +++LHSN + H DLKP NIL V + E KI R NP + D
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD--ERTLINPDIKVVD 180
Query: 190 L----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+V YRAPE++L A +++ D+W+IGCI E +F
Sbjct: 181 FGSATYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 73 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 123
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 124 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-A 176
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 225
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 93/223 (41%), Gaps = 25/223 (11%)
Query: 24 GCKVGRGTYGHVYKAR-----RKDNSDTRDYALKQI--EGTGLSMS-ACREIALLREL-K 74
G +G G +G V A + + A+K + + T +S E+ +++ + K
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX-------XXXXXXX 126
H N+I+L+ D ++++ +YA +L ++ R
Sbjct: 100 HKNIIHLLGA--CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 127 XXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKP 186
S YQ+ G+ YL S +HRDL N+LV E +KIAD G AR NN
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNIDYY 213
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 214 KKTTNGRLPVKWM-APEALFD-RVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 78 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 128
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + APE
Sbjct: 129 NYIHRDLRAANILVS----DTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-A 181
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G V++ + T +++GT + +EI++L +H N+++L F
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFE 71
Query: 87 SHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
S + + ++F++ D++ + N S ++Q+ + + +LHS+
Sbjct: 72 SMEE--LVMIFEFISGLDIFE--------RINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+ H D++P NI+ +KI + G AR LKP + + Y APE+
Sbjct: 122 NIGHFDIRPENIIYQTR--RSSTIKIIEFGQAR----QLKPGDNFRLLFTAPEYYAPEV- 174
Query: 206 LGARH--YTKAIDIWAIGCIFAELLT 229
+H + A D+W++G + LL+
Sbjct: 175 --HQHDVVSTATDMWSLGTLVYVLLS 198
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 11 NERTKVEDLFDYEGCKV---GRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACRE 66
++ KV +L D + K+ G G G V+K K + L +E + RE
Sbjct: 14 TQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE 73
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXX 125
+ +L E P ++ F ++D ++ + ++ + L ++K KA
Sbjct: 74 LQVLHECNSPYIVGFYGAF--YSDGEISICMEHMDGGSLDQVLK-----KAGRIPEQILG 126
Query: 126 XXXXSLLYQILDGIHYL-HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+ ++ G+ YL + ++HRD+KP+NILV RG +K+ D G + + +
Sbjct: 127 KVSIA----VIKGLTYLREKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSM 178
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 227
+ V T Y +PE L G HY+ DIW++G E+
Sbjct: 179 A-----NSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEM 215
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 31/228 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGL--------SMSACREIALLRELK- 74
G +G+G +G V+ R +D A+K I + S++ E+ALL ++
Sbjct: 36 GPLLGKGGFGTVFAGHRL--TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 75 ---HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
HP VI L+ F + + L DL+ I
Sbjct: 94 GGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR---------CF 144
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
Q++ I + HS V+HRD+K NIL+ + RG K+ D G L ++ +P D D
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILI---DLRRGCAKLIDFGSGALLHD--EPYTDFD 199
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
V Y PE + +++ +W++G + +++ + F QE
Sbjct: 200 GTRV---YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE 244
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ +Y + +++ + R LLY QI + Y
Sbjct: 97 --CTLEPPFYIVTEYMPYG--NLLDYLRECNREEVTAVV-------LLYMATQISSAMEY 145
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL N LV E VK+AD G +RL A W A
Sbjct: 146 LEKKNFIHRDLAARNCLVG----ENHVVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 199
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L ++ D+WA G + E+ T
Sbjct: 200 PE-SLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 285 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVSAVV-------LLYMATQISSAMEY 333
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HR+L N LV E VK+AD G +RL A W A
Sbjct: 334 LEKKNFIHRNLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 387
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 388 PESLAYNKFSIKS-DVWAFGVLLWEIAT 414
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 60 SMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKAN 117
SM A + LL H PN ++++ VF + + L+ Y EH +I + +K
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY-EHRGIPLIYVKQISK-- 138
Query: 118 XXXXXXXXXXXXSLLYQILDGIHYLHSN-WVLHRDLKPANIL--VMGEGIERGRVKIADM 174
Q+L G+ Y+H ++H D+KP N+L ++ ++KIAD+
Sbjct: 139 ----------------QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182
Query: 175 GFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
G A ++ + T YR+PE+LLGA + DIW+ C+ EL+T + +F
Sbjct: 183 GNACWYDE------HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLF 235
Query: 235 HCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ D S D + +I ++G
Sbjct: 236 ---EPDEGHSYTKDDDHIAQIIELLG 258
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 112 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 161
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 162 YLSDMGFVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 218 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 60 SMSACREIALLRELKH--PNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKAN 117
SM A + LL H PN ++++ VF + + L+ Y EH +I + +K
Sbjct: 82 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY-EHRGIPLIYVKQISK-- 138
Query: 118 XXXXXXXXXXXXSLLYQILDGIHYLHSN-WVLHRDLKPANIL--VMGEGIERGRVKIADM 174
Q+L G+ Y+H ++H D+KP N+L ++ ++KIAD+
Sbjct: 139 ----------------QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182
Query: 175 GFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
G A ++ + T YR+PE+LLGA + DIW+ C+ EL+T + +F
Sbjct: 183 GNACWYDE------HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLF 235
Query: 235 HCRQEDIKTSNPYHHDQLDRIFSVMG 260
+ D S D + +I ++G
Sbjct: 236 ---EPDEGHSYTKDDDHIAQIIELLG 258
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V+K K + L +E + RE+ +L E P ++
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F ++D ++ + ++ + L ++K +A + + ++ G+ YL
Sbjct: 73 F--YSDGEISICMEHMDGGSLDQVLK--KAGR-------IPEQILGKVSIAVIKGLTYLR 121
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y +P
Sbjct: 122 EKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSP 172
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G E+
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEM 196
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLS----MSACREIALLRELKHPNVINLI 82
+G+G + V + + +YA K I LS RE + R LKH N++ L
Sbjct: 12 IGKGAFSVVRRCVKL--CTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 83 SVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
+L+FD +L+ I +++ A A+ + QIL+
Sbjct: 70 DSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADAS------------HCIQQILEA 115
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
+ + H V+HRDLKP N+L + + VK+AD G A + T
Sbjct: 116 VLHCHQMGVVHRDLKPENLL-LASKCKGAAVKLADFGLAIEVQGDQQAWFGF---AGTPG 171
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
Y +PE+L Y K +DIWA G I LL P F
Sbjct: 172 YLSPEVLR-KEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V+K K + L +E + RE+ +L E P ++
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F ++D ++ + ++ + L ++K +A + + ++ G+ YL
Sbjct: 73 F--YSDGEISICMEHMDGGSLDQVLK--KAGR-------IPEQILGKVSIAVIKGLTYLR 121
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y +P
Sbjct: 122 EKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSP 172
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G E+
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V+K K + L +E + RE+ +L E P ++
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F ++D ++ + ++ + L ++K +A + + ++ G+ YL
Sbjct: 73 F--YSDGEISICMEHMDGGSLDQVLK--KAGR-------IPEQILGKVSIAVIKGLTYLR 121
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y +P
Sbjct: 122 EKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSP 172
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G E+
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEM 196
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 112 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 161
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 218 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 282 --CTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 330
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HR+L N LV E VK+AD G +RL A W A
Sbjct: 331 LEKKNFIHRNLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 384
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 385 PESLAYNKFSIKS-DVWAFGVLLWEIAT 411
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 25/248 (10%)
Query: 3 YEFKIKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLS 60
YE +T +E K D + KV G G +G V R K S A+K ++ G +
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYT 86
Query: 61 MSACR----EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAK 115
R E +++ + HPN+I L V + V ++ +Y E+ L ++ H A
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 116 ANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMG 175
+L I G+ YL +HRDL NIL+ + K++D G
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV----CKVSDFG 192
Query: 176 FARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPI 233
+R+ + + + + +PE + R +T A D+W+ G + E+++ P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 234 FHCRQEDI 241
+ +D+
Sbjct: 252 WEMSNQDV 259
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 112 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 161
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 218 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G YG VY+ K S T A+K ++ + + +E A+++E+KHPN++ L+ V
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLT--VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLY---QILDGIHY 141
+ +++ ++ + +++ + R LLY QI + Y
Sbjct: 324 CT--REPPFYIITEFMTYG--NLLDYLRECNRQEVNAVV-------LLYMATQISSAMEY 372
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HR+L N LV E VK+AD G +RL A W A
Sbjct: 373 LEKKNFIHRNLAARNCLVG----ENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKW-TA 426
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
PE L + K+ D+WA G + E+ T
Sbjct: 427 PESLAYNKFSIKS-DVWAFGVLLWEIAT 453
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 25/248 (10%)
Query: 3 YEFKIKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLS 60
YE +T +E K D + KV G G +G V R K S A+K ++ G +
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYT 86
Query: 61 MSACR----EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAK 115
R E +++ + HPN+I L V + V ++ +Y E+ L ++ H A
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 116 ANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMG 175
+L I G+ YL +HRDL NIL+ + K++D G
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV----CKVSDFG 192
Query: 176 FARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPI 233
+R+ + + + + +PE + R +T A D+W+ G + E+++ P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 234 FHCRQEDI 241
+ +D+
Sbjct: 252 WEMSNQDV 259
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 29/225 (12%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-----LLRELKHPNVINL 81
+G G +G V KAR K + D A+K+++ S R+ A L + HPN+INL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAK----------ANXXXXXXXXXXXXSL 131
+ + ++L +YA H +++ F R ++ AN
Sbjct: 89 LGA--CEHRGYLYLAIEYAPHG--NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 132 LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
+ G+ YL +HR+L NILV E KIAD G +R +K
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVG----ENYVAKIADFGLSRGQEVYVKKTMGRL 200
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
PV W L YT D+W+ G + E+++ +C
Sbjct: 201 PVR---WMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTPYC 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 81 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 194
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 195 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 236
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V+K K + L +E + RE+ +L E P ++
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F ++D ++ + ++ + L ++K +A + + ++ G+ YL
Sbjct: 73 F--YSDGEISICMEHMDGGSLDQVLK--KAGR-------IPEQILGKVSIAVIKGLTYLR 121
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y +P
Sbjct: 122 EKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSP 172
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G E+
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEM 196
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V+K K + L +E + RE+ +L E P ++
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F ++D ++ + ++ + L ++K +A + + ++ G+ YL
Sbjct: 73 F--YSDGEISICMEHMDGGSLDQVLK--KAGR-------IPEQILGKVSIAVIKGLTYLR 121
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y +P
Sbjct: 122 EKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDSMA-----NSFVGTRSYMSP 172
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G E+
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEM 196
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 72 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HASETKFEMKKLIDIARQTAR 119
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFLH----EDNTVKIGDFGLATV-KSRWSGSHQFEQLSGSI 174
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSE 231
+ APE+ + + Y+ D++A G + EL+T +
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 38/226 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALK--------QIEGTGLSMSACREIALLRELKHPNV 78
+G+G++G V + RK + YA+K Q + +M R +AL K P +
Sbjct: 28 LGKGSFGKVMLSERKGTDEL--YAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFL 83
Query: 79 INLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--Q 134
L S F + + +++ + +Y ++HI + R + + ++ Y +
Sbjct: 84 TQLHSCFQTMD--RLYFVMEYVNGGDLMYHIQQVGRFKEPH------------AVFYAAE 129
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
I G+ +L S +++RDLK N+++ EG +KIAD G + +
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEG----HIKIADFGMCK---ENIWDGVTTKXFC 182
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
T Y APE++ + Y K++D WA G + E+L + F ED
Sbjct: 183 GTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 77 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 190
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 191 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 232
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVIN-LISV 84
+G GT+G V + ++ ALK I G A R EI +L+++K + N + V
Sbjct: 27 LGEGTFGKVVECLDHARGKSQ-VALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCV 85
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL------LYQILDG 138
+S W F++ H I F K L YQ+
Sbjct: 86 LMSD-----W--FNFHGH---MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135
Query: 139 IHYLHSNWVLHRDLKPANILVMG---------------EGIERGRVKIADMGFARLFNNP 183
+ +LH N + H DLKP NIL + + ++ +++AD G A +
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE- 194
Query: 184 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
+V T YR PE++L + + D+W+IGCI E +F +
Sbjct: 195 -----HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHE 243
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 110 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 159
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 160 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 216 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 100 EGVV--TKSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 149
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 150 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 206 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSAC---REIALLREL- 73
G +G G +G V A + K N T+ A+K ++ E+ +++ +
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 74 KHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
KH N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 85 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 198
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 199 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 23/174 (13%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHII---KFHRAAKANXXX 120
RE + R LKHPN++ L +L+FD +L+ I +++ A A+
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAREYYSEADAS--- 113
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
+ QIL+ + + H V+HR+LKP N+L + ++ VK+AD G A
Sbjct: 114 ---------HCIQQILEAVLHCHQMGVVHRNLKPENLL-LASKLKGAAVKLADFGLAIEV 163
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+ T Y +PE+L Y K +D+WA G I LL P F
Sbjct: 164 EGEQQAWFGF---AGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 84 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 197
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 198 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 239
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVIN-LISV 84
+G GT+G V + ++ ALK I G A R EI +L+++K + N + V
Sbjct: 36 LGEGTFGKVVECLDHARGKSQ-VALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCV 94
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL------LYQILDG 138
+S W F++ H I F K L YQ+
Sbjct: 95 LMSD-----W--FNFHGH---MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 144
Query: 139 IHYLHSNWVLHRDLKPANILVMG---------------EGIERGRVKIADMGFARLFNNP 183
+ +LH N + H DLKP NIL + + ++ +++AD G A +
Sbjct: 145 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE- 203
Query: 184 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
+V T YR PE++L + + D+W+IGCI E +F +
Sbjct: 204 -----HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHE 252
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 92 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 205
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 112 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 161
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G R+ + + + +
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 218 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 92 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 205
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 247
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI------EGTGLSMSACREIALLRELKHPNVIN 80
+GRG+Y V R K R YA+K + + + + + HP ++
Sbjct: 28 IGRGSYAKVLLVRLKKTD--RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 81 LISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L S F + +++ + +Y ++H+ + + + + +I
Sbjct: 86 LHSCF--QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----------EISLA 133
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
++YLH +++RDLK N+L+ E G +K+ D G + L+P T
Sbjct: 134 LNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 186
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
Y APE+L G Y ++D WA+G + E++ F + +S+ + D +F V
Sbjct: 187 YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDI----VGSSDNPDQNTEDYLFQV 241
Query: 259 MGFPLEKDWEDIRKMP-EHPTLLKDF 283
+ LEK R M + ++LK F
Sbjct: 242 I---LEKQIRIPRSMSVKAASVLKSF 264
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ +Y E+ L ++ H A +L I G+
Sbjct: 83 EGVVT--KSKPVMIVTEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 132
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 189 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 7 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 64 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 112
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKXF 165
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 166 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVIN-LISV 84
+G GT+G V + ++ ALK I G A R EI +L+++K + N + V
Sbjct: 59 LGEGTFGKVVECLDHARGKSQ-VALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCV 117
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL------LYQILDG 138
+S W F++ H I F K L YQ+
Sbjct: 118 LMSD-----W--FNFHGH---MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 167
Query: 139 IHYLHSNWVLHRDLKPANILVMG---------------EGIERGRVKIADMGFARLFNNP 183
+ +LH N + H DLKP NIL + + ++ +++AD G A +
Sbjct: 168 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE- 226
Query: 184 LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
+V T YR PE++L + + D+W+IGCI E +F +
Sbjct: 227 -----HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHE 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 24/205 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIALLRELKHPNVINLISV 84
++G G G V+K K + L +E + RE+ +L E P ++
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 85 FLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL- 142
F S D ++ + ++ + L ++K KA + ++ G+ YL
Sbjct: 76 FYS--DGEISICMEHMDGGSLDQVLK-----KAGRIPEQILGKVSIA----VIKGLTYLR 124
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+ ++HRD+KP+NILV RG +K+ D G + + + + V T Y +P
Sbjct: 125 EKHKIMHRDVKPSNILVN----SRGEIKLCDFGVSGQLIDEMA-----NEFVGTRSYMSP 175
Query: 203 ELLLGARHYTKAIDIWAIGCIFAEL 227
E L G HY+ DIW++G E+
Sbjct: 176 ERLQGT-HYSVQSDIWSMGLSLVEM 199
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 7 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 64 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 112
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKTF 165
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 166 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 7 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 64 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 112
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKTF 165
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 166 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMSACREI----ALLRELKHPNVINL 81
+G G +G V + R K A+K ++G G + RE +++ + +HPN+I L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V N V +L ++ E+ + F R +L I G+ Y
Sbjct: 81 EGVV--TNSMPVMILTEFMENG--ALDSFLRLNDGQFTVIQLV-----GMLRGIASGMRY 131
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF-NNPLKP--LADLDPVVVTFW 198
L +HRDL NILV + K++D G +R N P + L + W
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLV----CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
APE + R +T A D W+ G + E+++ P + +D+
Sbjct: 188 T-APE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV 230
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 94/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ R ++
Sbjct: 133 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 246
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 247 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 288
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 7 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 64 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 112
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKXF 165
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 166 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 24/211 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMSACREI----ALLRELKHPNVINL 81
+G G +G V + R K A+K ++G G + RE +++ + +HPN+I L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKG-GYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V N V +L ++ E+ + F R +L I G+ Y
Sbjct: 83 EGVVT--NSMPVMILTEFMENG--ALDSFLRLNDGQFTVIQLV-----GMLRGIASGMRY 133
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF-NNPLKP--LADLDPVVVTFW 198
L +HRDL NILV + K++D G +R N P + L + W
Sbjct: 134 LAEMSYVHRDLAARNILVNSNLV----CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE + R +T A D W+ G + E+++
Sbjct: 190 T-APE-AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 12 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 69 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 117
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKXF 170
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 171 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 10 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 67 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 115
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKTF 168
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 169 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 38/226 (16%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALK--------QIEGTGLSMSACREIALLRELKHPNV 78
+G+G++G V + RK + YA+K Q + +M R +AL K P +
Sbjct: 349 LGKGSFGKVMLSERKGTDEL--YAVKILKKDVVIQDDDVECTMVEKRVLAL--PGKPPFL 404
Query: 79 INLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLY--Q 134
L S F + + +++ + +Y ++HI + R + + ++ Y +
Sbjct: 405 TQLHSCFQTMD--RLYFVMEYVNGGDLMYHIQQVGRFKEPH------------AVFYAAE 450
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
I G+ +L S +++RDLK N+++ EG +KIAD G + +
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEG----HIKIADFGMCK---ENIWDGVTTKXFC 503
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
T Y APE++ + Y K++D WA G + E+L + F ED
Sbjct: 504 GTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 74 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 124
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HR+L+ ANILV + KIAD G ARL + + + APE
Sbjct: 125 NYIHRNLRAANILVS----DTLSCKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-A 177
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 226
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 28/222 (12%)
Query: 20 FDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMS-----ACREIALLRELK 74
FDY +G+GT+G V R K + R YA+K + + E +L+ +
Sbjct: 7 FDYLKL-LGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
HP + L F +H+ ++ + +YA +L+ + R
Sbjct: 64 HPFLTALKYAFQTHD--RLCFVMEYANGGELFFHLSRERVFTEERARFYGA--------- 112
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
+I+ + YLHS V++RD+K N+++ + G +KI D G + + A +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCK---EGISDGATMKXF 165
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
T Y APE +L Y +A+D W +G + E++ F+
Sbjct: 166 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 40/237 (16%)
Query: 10 SNERTKVEDLFDYEGCKVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIA 68
S +RT D+ E C VG+G YG V++ + +N + ++ + S RE
Sbjct: 1 SMQRTVARDITLLE-C-VGKGRYGEVWRGSWQGENVAVKIFSSRD------EKSWFRETE 52
Query: 69 LLRE--LKHPNVINLISVFLS--HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
L L+H N++ I+ ++ H+ ++WL+ Y H++ + + + +
Sbjct: 53 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY--HEMGSLYDYLQLTTLDTVSCLR- 109
Query: 125 XXXXXSLLYQILDGIHYLH--------SNWVLHRDLKPANILVMGEGIERGRVKIADMGF 176
++ I G+ +LH + HRDLK NILV + G+ IAD+G
Sbjct: 110 ------IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK----KNGQCCIADLGL 159
Query: 177 ARLFNNPLKPL-ADLDPVVVTFWYRAPELL-----LGARHYTKAIDIWAIGCIFAEL 227
A + + L +P V T Y APE+L + K +DIWA G + E+
Sbjct: 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G G V+ ++ +LKQ G+ + E L+++L+H ++ L +V
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
++++ +Y E+ ++ F + + QI +G+ ++
Sbjct: 78 ---TQEPIYIITEYMENG--SLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER 128
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+HRDL+ ANILV + KIAD G ARL + + + + APE
Sbjct: 129 NYIHRDLRAANILVS----DTLSCKIADFGLARLIEDAEXTAREGAKFPIK--WTAPE-A 181
Query: 206 LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSVM 259
+ +T D+W+ G + E++T H R +NP L+R + ++
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT-----HGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
S +Q+L+ + + H+ VLHRD+K NIL+ + RG +K+ D G L + + D
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFGSGALLKDTV--YTD 215
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 242
D V Y PE + R++ ++ +W++G + +++ + F +E I+
Sbjct: 216 FDGTRV---YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-LLRELKHPNVINLISV 84
++G G +G V+ +++ A+K ++ +S+ A E A L++ L+H ++ L +V
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKV---AVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 85 FLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
+ ++++ +Y A+ L +K K QI +G+ Y+
Sbjct: 77 V--TREEPIYIITEYMAKGSLLDFLKSDEGGKV-------LLPKLIDFSAQIAEGMAYIE 127
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+HRDL+ AN+LV E KIAD G AR+ + + + APE
Sbjct: 128 RKNYIHRDLRAANVLVS----ESLMCKIADFGLARVIED--NEYTAREGAKFPIKWTAPE 181
Query: 204 LL-LGARHYTKAIDIWAIGCIFAELLT 229
+ G +T D+W+ G + E++T
Sbjct: 182 AINFGC--FTIKSDVWSFGILLYEIVT 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXX 123
+EI +LR L H ++I ++ + L+ +Y L + H A
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL----- 119
Query: 124 XXXXXXSLLY--QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF- 180
LL+ QI +G+ YLHS +HR+L N+L+ + + VKI D G A+
Sbjct: 120 -------LLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRL----VKIGDFGLAKAVP 168
Query: 181 --NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + D D V FWY APE L + Y A D+W+ G ELLT
Sbjct: 169 EGHEYYRVREDGDSPV--FWY-APECLKEYKFYY-ASDVWSFGVTLYELLT 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+G G++G V++A + ++Q RE+A+++ L+HPN++ +
Sbjct: 44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
+ + + +Y +R + S+ Y + G++YLH+
Sbjct: 104 TQPPNLSI--VTEYLSRG-----SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 146 --WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
++HRDLK N+LV ++ VK+ D G +RL + L W APE
Sbjct: 157 NPPIVHRDLKSPNLLV----DKKYTVKVCDFGLSRLKASXF--LXSKXAAGTPEWM-APE 209
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLT 229
+L K+ D+++ G I EL T
Sbjct: 210 VLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 28/171 (16%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLW-HIIKFHRAAKANXXXXXX 123
EI L+ L+H ++ L V + N K++++ +Y +L+ +II R ++
Sbjct: 58 EIEALKNLRHQHICQLYHVLETAN--KIFMVLEYCPGGELFDYIISQDRLSEEETRV--- 112
Query: 124 XXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNP 183
+ QI+ + Y+HS HRDLKP N+L E ++K+ D G
Sbjct: 113 -------VFRQIVSAVAYVHSQGYAHRDLKPENLLF----DEYHKLKLIDFGLCA----- 156
Query: 184 LKPLAD----LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 230
KP + L + Y APEL+ G + D+W++G + L+
Sbjct: 157 -KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 30/216 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 84 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HASETKFEMKKLIDIARQTAR 131
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLH----EDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSI 186
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSE 231
+ APE+ + + Y+ D++A G + EL+T +
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 30/226 (13%)
Query: 21 DYEGCKV-GRGTYGHVYKARRKDNSDTRDYALK---QIEGTGLSMSAC--REIALLRELK 74
DY+ KV GRG +G V R K + + YA+K + E S SA E ++
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHK--ASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLY 133
P V+ L F +D+ ++++ +Y DL +++ +N + +
Sbjct: 134 SPWVVQLFCAF--QDDKYLYMVMEYMPGGDLVNLM-------SNYDVPEKWAKFYTAEVV 184
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPV 193
LD IH S ++HRD+KP N+L+ + G +K+AD G + + D
Sbjct: 185 LALDAIH---SMGLIHRDVKPDNMLL----DKHGHLKLADFGTCMKMDE--TGMVHCDTA 235
Query: 194 VVTFWYRAPELLL---GARHYTKAIDIWAIGCIFAELLTSEPIFHC 236
V T Y +PE+L G +Y + D W++G E+L + F+
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 281
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
K+G G++G V++A + ++Q RE+A+++ L+HPN++ +
Sbjct: 44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
+ + + +Y +R + S+ Y + G++YLH+
Sbjct: 104 TQPPNLSI--VTEYLSRG-----SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 146 --WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
++HR+LK N+LV ++ VK+ D G +RL + L+ W APE
Sbjct: 157 NPPIVHRNLKSPNLLV----DKKYTVKVCDFGLSRLKASTF--LSSKSAAGTPEWM-APE 209
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLT 229
+L K+ D+++ G I EL T
Sbjct: 210 VLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI------EGTGLSMSACREIALLRELKHPNVIN 80
+GRG+Y V R K R YA+K + + + + + HP ++
Sbjct: 13 IGRGSYAKVLLVRLKKTD--RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 81 LISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L S F + +++ + +Y ++H+ + + + + +I
Sbjct: 71 LHSCF--QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----------EISLA 118
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
++YLH +++RDLK N+L+ E G +K+ D G + L+P T
Sbjct: 119 LNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 171
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
Y APE+L G Y ++D WA+G + E++ F + +S+ + D +F V
Sbjct: 172 YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDI----VGSSDNPDQNTEDYLFQV 226
Query: 259 M 259
+
Sbjct: 227 I 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 38/220 (17%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRE--LKHPNVINLIS 83
VG+G YG V++ + +N + ++ + S RE L L+H N++ I+
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIA 98
Query: 84 VFLS--HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
++ H+ ++WL+ Y H++ + + + + ++ I G+ +
Sbjct: 99 SDMTSRHSSTQLWLITHY--HEMGSLYDYLQLTTLDTVSCLR-------IVLSIASGLAH 149
Query: 142 LH--------SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL-ADLDP 192
LH + HRDLK NILV + G+ IAD+G A + + L +P
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVK----KNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 193 VVVTFWYRAPELL-----LGARHYTKAIDIWAIGCIFAEL 227
V T Y APE+L + K +DIWA G + E+
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 38/220 (17%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRE--LKHPNVINLIS 83
VG+G YG V++ + +N + ++ + S RE L L+H N++ I+
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIA 69
Query: 84 VFLS--HNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
++ H+ ++WL+ Y H++ + + + + ++ I G+ +
Sbjct: 70 SDMTSRHSSTQLWLITHY--HEMGSLYDYLQLTTLDTVSCLR-------IVLSIASGLAH 120
Query: 142 LH--------SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPL-ADLDP 192
LH + HRDLK NILV + G+ IAD+G A + + L +P
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVK----KNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 193 VVVTFWYRAPELL-----LGARHYTKAIDIWAIGCIFAEL 227
V T Y APE+L + K +DIWA G + E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+VGRG++G V+ R KD A+K++ L + E+ L P ++ L
Sbjct: 81 RVGRGSFGEVH--RMKDKQTGFQCAVKKVR---LEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 86 LSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
V + + E L +IK + L Q L+G+ YLH+
Sbjct: 136 --REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---------LGQALEGLEYLHT 184
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWYRAP 202
+LH D+K N+L+ +G R + D G A + K L D + T + AP
Sbjct: 185 RRILHGDVKADNVLLSSDG---SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTS 230
E+++G K +DIW+ C+ +L
Sbjct: 242 EVVMGKPCDAK-VDIWSSCCMMLHMLNG 268
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 22/120 (18%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGE------GIERGR---------VKIADMG 175
+ +Q+ + +LH N + H DLKP NIL + +E+ R V++ D G
Sbjct: 142 MAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG 201
Query: 176 FARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
A + +V T YRAPE++L +++ D+W+IGCI E +F
Sbjct: 202 SATFDHE------HHSTIVSTRHYRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFTLFQ 254
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+VGRG++G V+ R KD A+K++ L + E+ L P ++ L
Sbjct: 65 RVGRGSFGEVH--RMKDKQTGFQCAVKKVR---LEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 86 LSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
V + + E L +IK + L Q L+G+ YLH+
Sbjct: 120 --REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY---------YLGQALEGLEYLHT 168
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWYRAP 202
+LH D+K N+L+ +G R + D G A + K L D + T + AP
Sbjct: 169 RRILHGDVKADNVLLSSDG---SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTS 230
E+++G K +DIW+ C+ +L
Sbjct: 226 EVVMGKPCDAK-VDIWSSCCMMLHMLNG 252
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 27/229 (11%)
Query: 7 IKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACRE 66
I N K +DL ++GRG YG V K R + A+K+I T S R
Sbjct: 41 IGNQNFEVKADDLEPI--MELGRGAYGVVEKMRHVPSGQI--MAVKRIRATVNSQEQKRL 96
Query: 67 IALL----RELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXX 122
+ L R + P + D VW+ + + L KF++ +
Sbjct: 97 LMDLDISMRTVDCPFTVTFYGALFREGD--VWICMELMDTSL---DKFYK--QVIDKGQT 149
Query: 123 XXXXXXXSLLYQILDGIHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARLFN 181
+ I+ + +LHS V+HRD+KP+N+L+ G+VK+ D G +
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA----LGQVKMCDFGISGYLV 205
Query: 182 NPLKPLADLDPVVVTFWYRAPELL---LGARHYTKAIDIWAIGCIFAEL 227
+ + D Y APE + L + Y+ DIW++G EL
Sbjct: 206 DSVAKTIDAG----CKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 101/241 (41%), Gaps = 34/241 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI------EGTGLSMSACREIALLRELKHPNVIN 80
+GRG+Y V R K R YA+K + + + + + HP ++
Sbjct: 17 IGRGSYAKVLLVRLKKTD--RIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 81 LISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L S F + +++ + +Y ++H+ + + + + +I
Sbjct: 75 LHSCF--QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----------EISLA 122
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
++YLH +++RDLK N+L+ E G +K+ D G + L+P T
Sbjct: 123 LNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 175
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
Y APE+L G Y ++D WA+G + E++ F + +S+ + D +F V
Sbjct: 176 YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDI----VGSSDNPDQNTEDYLFQV 230
Query: 259 M 259
+
Sbjct: 231 I 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 41/256 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 96 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQ 143
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSI 198
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+ APE+ + Y+ D++A G + EL+T + + SN + DQ+ I
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--I 247
Query: 256 FSVMGFPLEKDWEDIR 271
F V L D +R
Sbjct: 248 FMVGRGYLSPDLSKVR 263
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 41/256 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 95 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQ 142
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSI 197
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+ APE+ + Y+ D++A G + EL+T + + SN + DQ+ I
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--I 246
Query: 256 FSVMGFPLEKDWEDIR 271
F V L D +R
Sbjct: 247 FMVGRGYLSPDLSKVR 262
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ + E+ L ++ H A +L I G+
Sbjct: 112 EGVVT--KSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 161
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 162 YLSDMGAVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 218 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 41/256 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 73 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQ 120
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSI 175
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+ APE+ + Y+ D++A G + EL+T + + SN + DQ+ I
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--I 224
Query: 256 FSVMGFPLEKDWEDIR 271
F V L D +R
Sbjct: 225 FMVGRGYLSPDLSKVR 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 27/224 (12%)
Query: 24 GCKVGRGTYGHVYKA------RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELK--- 74
G +G G +G V A + K N T+ A+K ++ I+ + +K
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK-VAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAA-------KANXXXXXXXX 125
H N+INL+ D ++++ +YA +L ++ ++
Sbjct: 92 KHKNIINLLGA--CTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
S YQ+ G+ YL S +HRDL N+LV + + +KIAD G AR ++
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIADFGLARDIHHIDY 205
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE L R YT D+W+ G + E+ T
Sbjct: 206 YKKTTNGRLPVKWM-APEALFD-RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVIN 80
++G G +G V+ A + S T+D L ++ A RE LL L+H +++
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 81 LISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRA-------AKANXXXXXXXXXXXXSLL 132
V + + ++F+Y +H DL ++ H + +
Sbjct: 82 FYGV--CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLD 191
QI G+ YL S +HRDL N LV + VKI D G +R +++ +
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLL----VKIGDFGMSRDVYSTDYYRVG--G 193
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
++ + PE ++ R +T D+W+ G I E+ T +P F ++
Sbjct: 194 HTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA---CREIALLRELKHPNVINLIS 83
+G+G +V++ R K D +A+K RE +L++L H N++ L +
Sbjct: 17 LGQGATANVFRGRHKKTGDL--FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 84 VFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ R L+ ++ L+ +++ A +L ++ G+++L
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG------LPESEFLIVLRDVVGGMNHL 128
Query: 143 HSNWVLHRDLKPANIL-VMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
N ++HR++KP NI+ V+GE + K+ D G AR L+ + T Y
Sbjct: 129 RENGIVHRNIKPGNIMRVIGED-GQSVYKLTDFGAAR----ELEDDEQFVSLYGTEEYLH 183
Query: 202 PELLLGA-------RHYTKAIDIWAIGCIFAELLTSEPIF 234
P++ A + Y +D+W+IG F T F
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA---CREIALLRELKHPNVINLIS 83
+G+G +V++ R K D +A+K RE +L++L H N++ L +
Sbjct: 17 LGQGATANVFRGRHKKTGDL--FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 84 VFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
+ R L+ ++ L+ +++ A +L ++ G+++L
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG------LPESEFLIVLRDVVGGMNHL 128
Query: 143 HSNWVLHRDLKPANIL-VMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW--- 198
N ++HR++KP NI+ V+GE + K+ D G AR L D + V +
Sbjct: 129 RENGIVHRNIKPGNIMRVIGED-GQSVYKLTDFGAAR-------ELEDDEQFVXLYGTEE 180
Query: 199 YRAPELLLGA-------RHYTKAIDIWAIGCIFAELLTSEPIF 234
Y P++ A + Y +D+W+IG F T F
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G +G V+ A ++ A+K ++ +S+ A E +++ L+H ++ L +V
Sbjct: 189 KLGAGQFGEVWMATYNKHTKV---AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 85 FLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
++++ ++ A+ L +K +K QI +G+ ++
Sbjct: 246 V---TKEPIYIITEFMAKGSLLDFLKSDEGSK-------QPLPKLIDFSAQIAEGMAFIE 295
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN-PLKPLADLDPVVVTFWYRAP 202
+HRDL+ ANILV + KIAD G AR+ P+K + AP
Sbjct: 296 QRNYIHRDLRAANILVSASLV----CKIADFGLARVGAKFPIK-------------WTAP 338
Query: 203 ELL-LGARHYTKAIDIWAIGCIFAELLT 229
E + G+ +T D+W+ G + E++T
Sbjct: 339 EAINFGS--FTIKSDVWSFGILLMEIVT 364
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 38/266 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQI------EGTGLSMSACREIALLRELKHPNVIN 80
+GRG+Y V R K R YA++ + + + + + HP ++
Sbjct: 60 IGRGSYAKVLLVRLKKTD--RIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 81 LISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L S F + +++ + +Y ++H+ + + + + +I
Sbjct: 118 LHSCF--QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA----------EISLA 165
Query: 139 IHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFW 198
++YLH +++RDLK N+L+ E G +K+ D G + L+P T
Sbjct: 166 LNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCK---EGLRPGDTTSTFCGTPN 218
Query: 199 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
Y APE+L G Y ++D WA+G + E++ F + +S+ + D +F V
Sbjct: 219 YIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDI----VGSSDNPDQNTEDYLFQV 273
Query: 259 MGFPLEKDWEDIRKMP-EHPTLLKDF 283
+ LEK R + + ++LK F
Sbjct: 274 I---LEKQIRIPRSLSVKAASVLKSF 296
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 35/253 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVINLI 82
G ++G G++G VYK K + D L T + A + E+ +LR+ +H N++
Sbjct: 15 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 69
Query: 83 SVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+F+ ++ + ++ ++ + E L+H + + + Q G+
Sbjct: 70 -LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMD 120
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH+ ++HRDLK NI + E VKI D G A + + + + + +
Sbjct: 121 YLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWM 175
Query: 201 APEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
APE+ + Y+ D++A G + EL+T + + SN + DQ+ IF V
Sbjct: 176 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--IFMV 224
Query: 259 MGFPLEKDWEDIR 271
L D +R
Sbjct: 225 GRGYLSPDLSKVR 237
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXX 123
+EI +LR L H ++I ++ + L+ +Y L + H A
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL----- 119
Query: 124 XXXXXXSLLY--QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF- 180
LL+ QI +G+ YLH+ +HR+L N+L+ + + VKI D G A+
Sbjct: 120 -------LLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRL----VKIGDFGLAKAVP 168
Query: 181 --NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + D D V FWY APE L + Y A D+W+ G ELLT
Sbjct: 169 EGHEYYRVREDGDSPV--FWY-APECLKEYKFYY-ASDVWSFGVTLYELLT 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 35/253 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVINLI 82
G ++G G++G VYK K + D L T + A + E+ +LR+ +H N++
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 67
Query: 83 SVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+F+ ++ + ++ ++ + E L+H + + + Q G+
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMD 118
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH+ ++HRDLK NI + E VKI D G A + + + + + +
Sbjct: 119 YLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWM 173
Query: 201 APEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
APE+ + Y+ D++A G + EL+T + + SN + DQ+ IF V
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--IFMV 222
Query: 259 MGFPLEKDWEDIR 271
L D +R
Sbjct: 223 GRGYLSPDLSKVR 235
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 41/256 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 73 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQ 120
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSI 175
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+ APE+ + Y+ D++A G + EL+T + + SN + DQ+ I
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--I 224
Query: 256 FSVMGFPLEKDWEDIR 271
F V L D +R
Sbjct: 225 FMVGRGYLSPDLSKVR 240
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 30/216 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ ++ ++ + E L+H + + + Q
Sbjct: 84 ----LFMGYSTAPQLAIVTQWCEGSSLYHHL--------HASETKFEMKKLIDIARQTAR 131
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLH----EDNTVKIGDFGLA-TEKSRWSGSHQFEQLSGSI 186
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSE 231
+ APE+ + + Y+ D++A G + EL+T +
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G +G V+ A ++ A+K ++ +S+ A E +++ L+H ++ L +V
Sbjct: 195 KLGAGQFGEVWMATYNKHTKV---AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 85 FLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
++++ ++ A+ L +K +K QI +G+ ++
Sbjct: 252 V---TKEPIYIITEFMAKGSLLDFLKSDEGSK-------QPLPKLIDFSAQIAEGMAFIE 301
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+HRDL+ ANILV + KIAD G AR+ + + + APE
Sbjct: 302 QRNYIHRDLRAANILVSASLV----CKIADFGLARVIED--NEYTAREGAKFPIKWTAPE 355
Query: 204 LL-LGARHYTKAIDIWAIGCIFAELLT 229
+ G+ +T D+W+ G + E++T
Sbjct: 356 AINFGS--FTIKSDVWSFGILLMEIVT 380
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALL----RELKHPNVINL 81
++GRG YG V K R + A+K+I T S R + L R + P +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQI--MAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
D VW+ + + L KF++ + + I+ + +
Sbjct: 72 YGALFREGD--VWICMELMDTSL---DKFYK--QVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 142 LHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPL-ADLDPVVVTFW 198
LHS V+HRD+KP+N+L+ G+VK+ D G + L ++ K + A P
Sbjct: 125 LHSKLSVIHRDVKPSNVLINA----LGQVKMCDFGISGYLVDDVAKDIDAGCKP------ 174
Query: 199 YRAPELL---LGARHYTKAIDIWAIGCIFAEL 227
Y APE + L + Y+ DIW++G EL
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 25/248 (10%)
Query: 3 YEFKIKTSNERTKVEDLFDYEGCKV-GRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLS 60
YE +T +E K D + KV G G +G V R K S A+K ++ G +
Sbjct: 28 YEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYT 86
Query: 61 MSACR----EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAK 115
R E +++ + HPN+I L V + V ++ + E+ L ++ H A
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVT--KSKPVMIVTEXMENGSLDSFLRKHDA-- 142
Query: 116 ANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMG 175
+L I G+ YL +HRDL NIL+ + K++D G
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV----CKVSDFG 192
Query: 176 FARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPI 233
+R+ + + + + +PE + R +T A D+W+ G + E+++ P
Sbjct: 193 LSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
Query: 234 FHCRQEDI 241
+ +D+
Sbjct: 252 WEMSNQDV 259
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX-XXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R A AN + +I D
Sbjct: 91 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 150 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 206 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 235
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-LLRELKHPNVINLISV 84
K+G G +G V+ +++ A+K ++ +S+ A E A L++ L+H ++ L +V
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKV---AVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 85 FLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
+ ++++ ++ A+ L +K K QI +G+ Y+
Sbjct: 76 V--TKEEPIYIITEFMAKGSLLDFLKSDEGGKV-------LLPKLIDFSAQIAEGMAYIE 126
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+HRDL+ AN+LV E KIAD G AR+ + + + APE
Sbjct: 127 RKNYIHRDLRAANVLVS----ESLMCKIADFGLARVIED--NEYTAREGAKFPIKWTAPE 180
Query: 204 LL-LGARHYTKAIDIWAIGCIFAELLT 229
+ G +T ++W+ G + E++T
Sbjct: 181 AINFGC--FTIKSNVWSFGILLYEIVT 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 40/222 (18%)
Query: 28 GRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
RG +G V+KA+ D + + L+ + S + REI +KH N++ I+
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQ----SWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 87 SHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD----GIHYL 142
++ +V +LW I FH K + + L + + G+ YL
Sbjct: 80 RGSNLEV---------ELWLITAFHD--KGSLTDYLKGNIITWNELCHVAETMSRGLSYL 128
Query: 143 HSN--W---------VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLD 191
H + W + HRD K N+L+ + +AD G A F P KP D
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLT----AVLADFGLAVRF-EPGKPPGDTH 183
Query: 192 PVVVTFWYRAPELLLGARHYTK----AIDIWAIGCIFAELLT 229
V T Y APE+L GA ++ + ID++A+G + EL++
Sbjct: 184 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXX-XXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R A AN + +I D
Sbjct: 81 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 140 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 196 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 225
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 117/273 (42%), Gaps = 62/273 (22%)
Query: 14 TKVEDLFD---YEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTG-LSMSACREIAL 69
K+ DLF+ + K+G G + V+ D R A+K ++ + +A EI L
Sbjct: 23 VKIGDLFNGRYHVIRKLGWGHFSTVWLCW--DMQGKRFVAMKVVKSAQHYTETALDEIKL 80
Query: 70 LRELKH-----PN---VINLISVF--LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXX 119
L+ ++ PN V+ LI F N V ++F+ H H++K+ K+N
Sbjct: 81 LKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGH---HLLKW--IIKSNYQ 135
Query: 120 XXXXXXXXXXSLLYQILDGIHYLHSNW-VLHRDLKPANIL----------VMGEGIERGR 168
S++ Q+L G+ YLHS ++H D+KP NIL + E E +
Sbjct: 136 GLPVRCVK--SIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQK 193
Query: 169 V--------KIADMGFARLFNNPLKP---------LADLDPV----------VVTFWYRA 201
++ A L NPL P +ADL + T YR+
Sbjct: 194 AGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRS 253
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E+L+GA + T A DIW+ C+ EL T + +F
Sbjct: 254 IEVLIGAGYSTPA-DIWSTACMAFELATGDYLF 285
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTR-DYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
VG G +G V R K S A+K ++ G + R E +++ + HPN+I L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 82 ISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ + E+ L ++ H A +L I G+
Sbjct: 83 EGVV--TKSKPVMIVTEXMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMK 132
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NIL+ + K++D G +R+ + + + +
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 189 SPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V+ + A+K I EG E ++ +L HP ++ L V
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKV---AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 85 FLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
L + L+F++ EH L ++ R A + + +G+ YL
Sbjct: 69 CLEQA--PICLVFEFMEHGCLSDYLRTQRGLFA--------AETLLGMCLDVCEGMAYLE 118
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
V+HRDL N LV E +K++D G R + + V + +PE
Sbjct: 119 EACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--WASPE 172
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPI 233
+ +R+ +K+ D+W+ G + E+ + I
Sbjct: 173 VFSFSRYSSKS-DVWSFGVLMWEVFSEGKI 201
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSA-CREIALLRELKHPNVINLISV 84
K+G G +G V+ A ++ A+K ++ +S+ A E +++ L+H ++ L +V
Sbjct: 22 KLGAGQFGEVWMATYNKHTKV---AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 85 FLSHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
++++ ++ A+ L +K +K QI +G+ ++
Sbjct: 79 V---TKEPIYIITEFMAKGSLLDFLKSDEGSK-------QPLPKLIDFSAQIAEGMAFIE 128
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
+HRDL+ ANILV + KIAD G AR+ + + + APE
Sbjct: 129 QRNYIHRDLRAANILVSASLV----CKIADFGLARVIED--NEYTAREGAKFPIKWTAPE 182
Query: 204 LL-LGARHYTKAIDIWAIGCIFAELLT 229
+ G+ +T D+W+ G + E++T
Sbjct: 183 AINFGS--FTIKSDVWSFGILLMEIVT 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYA-----LKQIEGTGLSMSACREIALLRELKHPNVINL 81
+G G +G VYK +T L + G ++ E ++ + HP+++ L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V LS + V L + ++++ K N + QI G+ Y
Sbjct: 83 LGVCLSPTIQLVTQLMPHG-----CLLEYVHEHKDNIGSQLLL-----NWCVQIAKGMMY 132
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L ++HRDL N+LV VKI D G ARL K + D + + A
Sbjct: 133 LEERRLVHRDLAARNVLVKSP----NHVKITDFGLARLLEGDEKEY-NADGGKMPIKWMA 187
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E + R +T D+W+ G EL+T
Sbjct: 188 LE-CIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++GRG++G V+ R KD A+K++ L + E+ L P ++ L
Sbjct: 79 RLGRGSFGEVH--RMKDKQTGFQCAVKKVR---LEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 86 LSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
V + + E L +IK + L Q L+G+ YLH+
Sbjct: 134 --REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---------LGQALEGLEYLHT 182
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWYRAP 202
+LH D+K N+L+ +G R + D G A + K L D + T + AP
Sbjct: 183 RRILHGDVKADNVLLSSDG---SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTS 230
E+++G K +DIW+ C+ +L
Sbjct: 240 EVVMGKPCDAK-VDIWSSCCMMLHMLNG 266
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 134 QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF---NNPLKPLADL 190
QI +G+ YLH+ +HRDL N+L+ + + VKI D G A+ + + D
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRL----VKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 191 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNP 246
D V FWY APE L + Y A D+W+ G ELLT HC D S P
Sbjct: 198 DSPV--FWY-APECLKEYKFYY-ASDVWSFGVTLYELLT-----HC---DSSQSPP 241
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V+ + A+K I EG E ++ +L HP ++ L V
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKV---AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 85 FLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
L + L+F++ EH L ++ R A + + +G+ YL
Sbjct: 71 CLEQA--PICLVFEFMEHGCLSDYLRTQRGLFA--------AETLLGMCLDVCEGMAYLE 120
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRA 201
V+HRDL N LV E +K++D G R L + PV + +
Sbjct: 121 EACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WAS 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPI 233
PE+ +R+ +K+ D+W+ G + E+ + I
Sbjct: 173 PEVFSFSRYSSKS-DVWSFGVLMWEVFSEGKI 203
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V+ + A+K I EG E ++ +L HP ++ L V
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKV---AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 85 FLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
L + L+F++ EH L ++ R A + + +G+ YL
Sbjct: 74 CLEQA--PICLVFEFMEHGCLSDYLRTQRGLFA--------AETLLGMCLDVCEGMAYLE 123
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRA 201
V+HRDL N LV E +K++D G R L + PV + +
Sbjct: 124 EACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WAS 175
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPI 233
PE+ +R+ +K+ D+W+ G + E+ + I
Sbjct: 176 PEVFSFSRYSSKS-DVWSFGVLMWEVFSEGKI 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 21/206 (10%)
Query: 27 VGRGTYGHV----YKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
+G G +G V Y + K + +E +R+ HP+++ LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
V + VW++ + L + F + K + YQ+ + YL
Sbjct: 78 GVI---TENPVWIIMELC--TLGELRSFLQVRKFSLDLASLILYA-----YQLSTALAYL 127
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
S +HRD+ N+LV VK+ D G +R + A + + + AP
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTXXKASKGKLPIK--WMAP 181
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELL 228
E + R +T A D+W G E+L
Sbjct: 182 E-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 41/256 (16%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVI 79
G ++G G++G VYK + D A+K + T + + E+ +LR+ +H N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHG-----DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 80 NLISVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+F+ ++ + ++ ++ + E L+H + + + Q
Sbjct: 96 ----LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQ 143
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YLH+ ++HRDLK NI + E VKI D G A + + + +
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSI 198
Query: 198 WYRAPEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 255
+ APE+ + Y+ D++A G + EL+T + + SN + DQ+ I
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--I 247
Query: 256 FSVMGFPLEKDWEDIR 271
F V L D +R
Sbjct: 248 FMVGRGYLSPDLSKVR 263
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----------EIALLREL-K 74
++G G+YG V+K R K+ D R YA+K+ SMS R E+ ++ +
Sbjct: 64 RLGHGSYGEVFKVRSKE--DGRLYAVKR------SMSPFRGPKDRARKLAEVGSHEKVGQ 115
Query: 75 HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQ 134
HP + L + + +L+ E + + A A+ +LL
Sbjct: 116 HPCCVRLEQAW-----EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL-- 168
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMG-FARLFNNPLKPLADLDPV 193
+ +LHS ++H D+KPANI + RGR K+ D G L + + DP
Sbjct: 169 ---ALAHLHSQGLVHLDVKPANIFLG----PRGRCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 194 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
Y APELL G+ Y A D++++G E+ + + H
Sbjct: 222 -----YMAPELLQGS--YGTAADVFSLGLTILEVACNMELPH 256
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM---SACREIALLRELKHPNVINLI 82
++G G +G V++ K + R + K I T + + EI+++ +L HP +INL
Sbjct: 58 ELGSGAFGVVHRCVEK--ATGRVFVAKFI-NTPYPLDKYTVKNEISIMNQLHHPKLINLH 114
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
F + + L F L F R A + + + Q +G+ ++
Sbjct: 115 DAFEDKYEMVLILEF------LSGGELFDRIAAEDYKMSEAEVI---NYMRQACEGLKHM 165
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
H + ++H D+KP NI M E + VKI D G A N P + T + AP
Sbjct: 166 HEHSIVHLDIKPENI--MCETKKASSVKIIDFGLATKLN----PDEIVKVTTATAEFAAP 219
Query: 203 ELL--LGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 243
E++ YT D+WAIG + LL+ F ++D++T
Sbjct: 220 EIVDREPVGFYT---DMWAIGVLGYVLLSGLSPF-AGEDDLET 258
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 24/223 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALK-QIEGTGLSMSACR----EIALLRELKHPNVINL 81
+G G +G V R K RD A+ + G + R E +++ + HPNV++L
Sbjct: 51 IGAGEFGEVCSGRLK-LPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 82 ISVFLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
V + V ++ ++ E+ L ++ H +L I G+
Sbjct: 110 EGVVT--RGKPVMIVIEFMENGALDAFLRKHDG--------QFTVIQLVGMLRGIAAGMR 159
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL +HRDL NILV + K++D G +R+ + + + + +
Sbjct: 160 YLADMGYVHRDLAARNILVNSNLV----CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
APE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 216 APEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 257
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 22/210 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V+ + A+K I EG+ E ++ +L HP ++ L V
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKV---AIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 85 FLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
L + L+F++ EH L ++ R A + + +G+ YL
Sbjct: 91 CLEQA--PICLVFEFMEHGCLSDYLRTQRGLFA--------AETLLGMCLDVCEGMAYLE 140
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
V+HRDL N LV E +K++D G R + + V + +PE
Sbjct: 141 EACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--WASPE 194
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPI 233
+ +R+ +K+ D+W+ G + E+ + I
Sbjct: 195 VFSFSRYSSKS-DVWSFGVLMWEVFSEGKI 223
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 35/253 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVINLI 82
G ++G G++G VYK K + D L T + A + E+ +LR+ +H N++ +
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 83 SVFLSHNDRKV--WLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+ V W H L HII+ + Q G+
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHL-HIIE-----------TKFEMIKLIDIARQTAQGMD 118
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH+ ++HRDLK NI + E VKI D G A + + + + + +
Sbjct: 119 YLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWM 173
Query: 201 APEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
APE+ + Y+ D++A G + EL+T + + SN + DQ+ IF V
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--IFMV 222
Query: 259 MGFPLEKDWEDIR 271
L D +R
Sbjct: 223 GRGYLSPDLSKVR 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-------LLRELKHPNVI 79
+G+GT+G V + K + R YA+K ++ + A E+A +L+ +HP +
Sbjct: 16 LGKGTFGKVILVKEK--ATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 71
Query: 80 NLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F +H+ ++ + +YA +L+ + R + +I+
Sbjct: 72 ALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGA---------EIVSA 120
Query: 139 IHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+ YLHS V++RDLK N+++ +G +KI D G + +K A + T
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDG----HIKITDFGLCK---EGIKDGATMKXFCGTP 173
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
Y APE+L Y +A+D W +G + E++ F+
Sbjct: 174 EYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 35/253 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVINLI 82
G ++G G++G VYK K + D L T + A + E+ +LR+ +H N++
Sbjct: 33 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 87
Query: 83 SVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+F+ ++ + ++ ++ + E L+H + + + Q G+
Sbjct: 88 -LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMD 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 139 YLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLA-TEKSRWSGSHQFEQLSGSILWM 193
Query: 201 APEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
APE+ + Y+ D++A G + EL+T + + SN + DQ+ IF V
Sbjct: 194 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--IFMV 242
Query: 259 MGFPLEKDWEDIR 271
L D +R
Sbjct: 243 GRGYLSPDLSKVR 255
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 21/208 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYA-----LKQIEGTGLSMSACREIALLRELKHPNVINL 81
+G G +G VYK +T L + G ++ E ++ + HP+++ L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ V LS + V L + ++++ K N + QI G+ Y
Sbjct: 106 LGVCLSPTIQLVTQLMPHG-----CLLEYVHEHKDNIGSQLLL-----NWCVQIAKGMMY 155
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L ++HRDL N+LV VKI D G ARL K + D + + A
Sbjct: 156 LEERRLVHRDLAARNVLVKSP----NHVKITDFGLARLLEGDEKEY-NADGGKMPIKWMA 210
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
E + R +T D+W+ G EL+T
Sbjct: 211 LE-CIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 35/253 (13%)
Query: 24 GCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-EIALLRELKHPNVINLI 82
G ++G G++G VYK K + D L T + A + E+ +LR+ +H N++
Sbjct: 13 GQRIGSGSFGTVYKG--KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 67
Query: 83 SVFLSHNDR-KVWLLFDYAE-HDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
+F+ ++ + ++ ++ + E L+H + + + Q G+
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHL--------HIIETKFEMIKLIDIARQTAQGMD 118
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YLH+ ++HRDLK NI + E VKI D G A + + + + +
Sbjct: 119 YLHAKSIIHRDLKSNNIFLH----EDLTVKIGDFGLATE-KSRWSGSHQFEQLSGSILWM 173
Query: 201 APEL--LLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFSV 258
APE+ + Y+ D++A G + EL+T + + SN + DQ+ IF V
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ---------LPYSNINNRDQI--IFMV 222
Query: 259 MGFPLEKDWEDIR 271
L D +R
Sbjct: 223 GRGYLSPDLSKVR 235
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-------LLRELKHPNVI 79
+G+GT+G V + K + R YA+K ++ + A E+A +L+ +HP +
Sbjct: 18 LGKGTFGKVILVKEK--ATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 73
Query: 80 NLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F +H+ ++ + +YA +L+ + R + +I+
Sbjct: 74 ALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGA---------EIVSA 122
Query: 139 IHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+ YLHS V++RDLK N+++ +G +KI D G + +K A + T
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDG----HIKITDFGLCK---EGIKDGATMKXFCGTP 175
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
Y APE+L Y +A+D W +G + E++ F+
Sbjct: 176 EYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 18/207 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVINLI 82
+G G +G V R K + G + R E +++ + HPN+I+L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
V + V ++ +Y E+ + F R +L I G+ YL
Sbjct: 97 GVVTKC--KPVMIITEYMENG--SLDAFLRKNDGRFTVIQLV-----GMLRGIGSGMKYL 147
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
+HRDL NILV + K++D G +R+ + + + + AP
Sbjct: 148 SDMSAVHRDLAARNILVNSNLV----CKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E + R +T A D+W+ G + E+++
Sbjct: 204 E-AIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-------LLRELKHPNVI 79
+G+GT+G V K+ + R YA+K ++ + A E+A +L+ +HP +
Sbjct: 159 LGKGTFGKVILV--KEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 214
Query: 80 NLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F +H+ ++ + +YA +L+ + R + +I+
Sbjct: 215 ALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGA---------EIVSA 263
Query: 139 IHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+ YLHS V++RDLK N+++ +G +KI D G + +K A + T
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDG----HIKITDFGLCK---EGIKDGATMKTFCGTP 316
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
Y APE+L Y +A+D W +G + E++ F+
Sbjct: 317 EYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 353
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-------LLRELKHPNVI 79
+G+GT+G V + K + R YA+K ++ + A E+A +L+ +HP +
Sbjct: 17 LGKGTFGKVILVKEK--ATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 72
Query: 80 NLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F +H+ ++ + +YA +L+ + R + +I+
Sbjct: 73 ALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGA---------EIVSA 121
Query: 139 IHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+ YLHS V++RDLK N+++ +G +KI D G + +K A + T
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDG----HIKITDFGLCK---EGIKDGATMKXFCGTP 174
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
Y APE+L Y +A+D W +G + E++ F+
Sbjct: 175 EYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 88 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 138
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + + PV + P
Sbjct: 139 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEETSSVGSKFPVR----WSPP 190
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 191 EVLMYSKFSSKS-DIWAFGVLMWEIYS 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 72 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 122
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + + PV + P
Sbjct: 123 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPP 174
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 175 EVLMYSKFSSKS-DIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 73 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 123
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + + PV + P
Sbjct: 124 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPP 175
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 176 EVLMYSKFSSKS-DIWAFGVLMWEIYS 201
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 44/254 (17%)
Query: 15 KVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRD-YALKQIEGTGLSMSACREIALLREL 73
++ ++F E K+G GT+ VY A + + ALK + T + E+ L
Sbjct: 18 QLSNVFKIED-KIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 74 KHPNVINLISVFLSHNDRKVWLLFDYAEH----DLWHIIKFHRAAKANXXXXXXXXXXXX 129
+ + + ND V + Y EH D+ + + F +
Sbjct: 77 GGQDNVMGVKYCFRKNDH-VVIAMPYLEHESFLDILNSLSFQEVRE-------------- 121
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANIL---------VMGEGIERGR--VKIADMGFA- 177
+ + + +H ++HRD+KP+N L ++ G+ +G KI + F
Sbjct: 122 -YMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180
Query: 178 ------RLFNNP----LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 227
R N L + P T +RAPE+L + T AID+W+ G IF L
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 228 LTSEPIFHCRQEDI 241
L+ F+ +D+
Sbjct: 241 LSGRYPFYKASDDL 254
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 18/212 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G VYK R D + LK+ G + E+ ++ H N++ L +
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCM 105
Query: 87 SHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
+ +R L++ Y A + ++ ++ S G+ YLH +
Sbjct: 106 TPTER--LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA-----RGLAYLHDH 158
Query: 146 W---VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
++HRD+K ANIL+ E + D G A+L + K V T + AP
Sbjct: 159 CDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMD--YKDXHVXXAVRGTIGHIAP 212
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E L + K D++ G + EL+T + F
Sbjct: 213 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 89
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL- 132
H NV+NL+ + + ++ ++ + ++ + R+ + L
Sbjct: 90 HHLNVVNLLGA-CTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 133 --------YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIXKDP 202
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 203 DXVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 68 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 118
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + + PV + P
Sbjct: 119 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPP 170
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 171 EVLMYSKFSSKS-DIWAFGVLMWEIYS 196
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIA-------LLRELKHPNVI 79
+G+GT+G V K+ + R YA+K ++ + A E+A +L+ +HP +
Sbjct: 156 LGKGTFGKVILV--KEKATGRYYAMKILKKE--VIVAKDEVAHTLTENRVLQNSRHPFLT 211
Query: 80 NLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
L F +H+ ++ + +YA +L+ + R + +I+
Sbjct: 212 ALKYSFQTHD--RLCFVMEYANGGELFFHLSRERVFSEDRARFYGA---------EIVSA 260
Query: 139 IHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
+ YLHS V++RDLK N+++ +G +KI D G + +K A + T
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDG----HIKITDFGLCK---EGIKDGATMKTFCGTP 313
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 235
Y APE+L Y +A+D W +G + E++ F+
Sbjct: 314 EYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 94/231 (40%), Gaps = 27/231 (11%)
Query: 5 FKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSAC 64
F+ N K +DL ++GRG YG V K R + A+K+I T S
Sbjct: 22 FQGAXENFEVKADDLEPIX--ELGRGAYGVVEKXRHVPSGQIX--AVKRIRATVNSQEQK 77
Query: 65 REIALL----RELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXX 120
R + L R + P + D VW+ + + L KF++ +
Sbjct: 78 RLLXDLDISXRTVDCPFTVTFYGALFREGD--VWICXELXDTSL---DKFYK--QVIDKG 130
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFARL 179
+ I+ + +LHS V+HRD+KP+N+L+ G+VK D G +
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA----LGQVKXCDFGISGY 186
Query: 180 FNNPLKPLADLDPVVVTFWYRAPELL---LGARHYTKAIDIWAIGCIFAEL 227
+ + D+D Y APE + L + Y+ DIW++G EL
Sbjct: 187 LVDDVA--KDIDAGCKP--YXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V+ + A+K I EG E ++ +L HP ++ L V
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKV---AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 85 FLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
L + L+F++ EH L ++ R A + + +G+ YL
Sbjct: 71 CLEQA--PICLVFEFMEHGCLSDYLRTQRGLFA--------AETLLGMCLDVCEGMAYLE 120
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRA 201
V+HRDL N LV E +K++D G R L + PV + +
Sbjct: 121 EASVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK----WAS 172
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLTSEPI 233
PE+ +R+ +K+ D+W+ G + E+ + I
Sbjct: 173 PEVFSFSRYSSKS-DVWSFGVLMWEVFSEGKI 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 63 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 117
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 118 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 168
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 169 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 79 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 129
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + + PV + P
Sbjct: 130 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPP 181
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 182 EVLMYSKFSSKS-DIWAFGVLMWEIYS 207
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 16 VEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTG---LSMSACREIALLRE 72
V ++ +GC + G G +Y A + N + R LK + +G A E L E
Sbjct: 78 VAGQYEVKGC-IAHGGLGWIYLALDR-NVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE 135
Query: 73 LKHPNVINLISVFLSHNDRKV----WLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXX 128
+ HP+++ + + F+ H DR +++ +Y K + A
Sbjct: 136 VVHPSIVQIFN-FVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAI--------- 185
Query: 129 XSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLA 188
+ L +IL + YLHS +++ DLKP NI++ E ++K+ D+G N+
Sbjct: 186 -AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-----QLKLIDLGAVSRINS------ 233
Query: 189 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
+ T ++APE++ T A DI+ +G A L P + R D
Sbjct: 234 -FGYLYGTPGFQAPEIVRTGP--TVATDIYTVGRTLAALTLDLPTRNGRYVD 282
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 21/209 (10%)
Query: 24 GCKVGRGTYGHV----YKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVI 79
G +G G +G V Y + K + +E +R+ HP+++
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
LI V + VW++ + L + F + K + YQ+ +
Sbjct: 455 KLIGVI---TENPVWIIMELC--TLGELRSFLQVRKFSLDLASLILYA-----YQLSTAL 504
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRD+ N+LV VK+ D G +R + A + + +
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDC----VKLGDFGLSRYMEDSTYYKASKGKLPIK--W 558
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELL 228
APE + R +T A D+W G E+L
Sbjct: 559 MAPE-SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 62 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 116
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 117 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 167
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 168 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 114
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 115 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 165
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 166 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 88
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 147
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIXKDPD 203
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 204 XVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++GRG++G V+ R +D A+K++ L + E+ L P ++ L
Sbjct: 100 RLGRGSFGEVH--RMEDKQTGFQCAVKKVR---LEVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 86 LSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
V + + E L ++K + L Q L+G+ YLHS
Sbjct: 155 --REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALY---------YLGQALEGLEYLHS 203
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWYRAP 202
+LH D+K N+L+ +G + D G A + K L D + T + AP
Sbjct: 204 RRILHGDVKADNVLLSSDG---SHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTS 230
E++LG R +D+W+ C+ +L
Sbjct: 261 EVVLG-RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 440 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKFSLDLASLI 494
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 495 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 545
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 546 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 114
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 115 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 165
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 166 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 88 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 142
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 143 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 193
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 194 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 57 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 111
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 112 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 162
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 163 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 79
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 138
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIXKDPD 194
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 195 XVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 65 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKYSLDLASLI 119
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 120 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDST 170
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 171 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 65 REIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXX 124
+E +R+ HP+++ LI V + VW++ + L + F + K +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVI---TENPVWIIMELC--TLGELRSFLQVRKFSLDLASLI 114
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
YQ+ + YL S +HRD+ N+LV VK+ D G +R +
Sbjct: 115 LYA-----YQLSTALAYLESKRFVHRDIAARNVLVSATDC----VKLGDFGLSRYMEDST 165
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 228
A + + + APE + R +T A D+W G E+L
Sbjct: 166 YYKASKGKLPIK--WMAPE-SINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
E +++ + HPN+I+L V + V ++ +Y E+ + F R
Sbjct: 65 EASIMGQFDHPNIIHLEGVVTKC--KPVMIITEYMENG--SLDAFLRKNDGRFTVIQLV- 119
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+L I G+ YL +HRDL NILV + K++D G +R+ + +
Sbjct: 120 ----GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLV----CKVSDFGMSRVLEDDPE 171
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+ + APE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 172 AAYTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 44/104 (42%), Gaps = 20/104 (19%)
Query: 149 HRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGA 208
HRD+KP NILV + + D G A + + L L V T +Y APE
Sbjct: 157 HRDVKPENILVSADDF----AYLVDFGIASATTD--EKLTQLGNTVGTLYYXAPE-RFSE 209
Query: 209 RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 252
H T DI+A+ C+ E LT P PY DQL
Sbjct: 210 SHATYRADIYALTCVLYECLTGSP-------------PYQGDQL 240
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 76 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YL++N +HRDL N +V E VKI D G R ++
Sbjct: 135 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 191 WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREI----ALLRELKHPNVINL 81
++G GT G V+K R + A+KQ+ +G R + +L+ P ++
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHV--IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
F+++ D V++ + + K + + I+ ++Y
Sbjct: 90 FGTFITNTD--VFIAMELMGTCAEKLKKRMQGP--------IPERILGKMTVAIVKALYY 139
Query: 142 L-HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA-RLFNNPLKPLADLDPVVVTFWY 199
L + V+HRD+KP+NIL+ ERG++K+ D G + RL ++ K D Y
Sbjct: 140 LKEKHGVIHRDVKPSNILL----DERGQIKLCDFGISGRLVDDKAK-----DRSAGCAAY 190
Query: 200 RAPELL----LGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQE 239
APE + Y D+W++G EL T + P +C+ +
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 28/224 (12%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 79
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 138
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIXKDPD 194
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 195 XVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 88 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 138
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + + PV + P
Sbjct: 139 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEYTSSVGSKFPVR----WSPP 190
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 191 EVLMYSKFSSKS-DIWAFGVLMWEIYS 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 16/178 (8%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
E +++ + HPN+I+L V + V ++ +Y E+ + F R
Sbjct: 59 EASIMGQFDHPNIIHLEGVVTKC--KPVMIITEYMENG--SLDAFLRKNDGRFTVIQLV- 113
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLK 185
+L I G+ YL +HRDL NILV + K++D G +R+ + +
Sbjct: 114 ----GMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLV----CKVSDFGMSRVLEDDPE 165
Query: 186 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+ + APE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 166 AAYTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 85 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTF 197
G+ YL++N +HRDL N +V E VKI D G R ++
Sbjct: 144 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 200 WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 22/222 (9%)
Query: 27 VGRGTYGHVYKARRK-DNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVINL 81
+G G +G V R K A+K ++ G + R E +++ + HPN+I+L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
V + V ++ +Y E+ K N +L I G+ Y
Sbjct: 89 EGVVT--KSKPVMIVTEYMENG-----SLDTFLKKNDGQFTVIQLV--GMLRGISAGMKY 139
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L +HRDL NIL+ + K++D G +R+ + + + + A
Sbjct: 140 LSDMGYVHRDLAARNILINSNLV----CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 195
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
PE + R +T A D+W+ G + E+++ P + +D+
Sbjct: 196 PE-AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV 236
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 90
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL- 132
H NV+NL+ + + ++ ++ + + + + +K N L
Sbjct: 91 HHLNVVNLLGA-CTKPGGPLMVIVEFCK---FGNLSTYLRSKRNEFVPYKPEDLYKDFLT 146
Query: 133 --------YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR
Sbjct: 147 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS----EKNVVKICDFGLARDIXKDP 202
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 203 DXVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 88
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 147
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP- 202
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 203 DXVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 20/217 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V++ + + + +EI + L+HP ++NL F
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
+D ++ +++++ F + A + + Q+ G+ ++H N
Sbjct: 118 --EDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAV---EYMRQVCKGLCHMHEN 168
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+H DLKP NI+ + +K+ D G L P + T + APE+
Sbjct: 169 NYVHLDLKPENIMFTTK--RSNELKLIDFGLTAH----LDPKQSVKVTTGTAEFAAPEVA 222
Query: 206 LG--ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
G +YT D+W++G + LL+ F +D
Sbjct: 223 EGKPVGYYT---DMWSVGVLSYILLSGLSPFGGENDD 256
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 23/208 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++GRG++G V+ R +D A+K++ L + E+ L P ++ L
Sbjct: 81 RLGRGSFGEVH--RMEDKQTGFQCAVKKVR---LEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 86 LSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
V + + E L ++K + L Q L+G+ YLHS
Sbjct: 136 --REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALY---------YLGQALEGLEYLHS 184
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF--NNPLKPLADLDPVVVTFWYRAP 202
+LH D+K N+L+ +G + D G A + K L D + T + AP
Sbjct: 185 RRILHGDVKADNVLLSSDG---SHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTS 230
E++LG R +D+W+ C+ +L
Sbjct: 242 EVVLG-RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 88/217 (40%), Gaps = 20/217 (9%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
++G G +G V++ + + + +EI + L+HP ++NL F
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 86 LSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
+D ++ +++++ F + A + + Q+ G+ ++H N
Sbjct: 224 --EDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAV---EYMRQVCKGLCHMHEN 274
Query: 146 WVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELL 205
+H DLKP NI+ + +K+ D G L P + T + APE+
Sbjct: 275 NYVHLDLKPENIMFTTK--RSNELKLIDFGLTAH----LDPKQSVKVTTGTAEFAAPEVA 328
Query: 206 LG--ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
G +YT D+W++G + LL+ F +D
Sbjct: 329 EGKPVGYYT---DMWSVGVLSYILLSGLSPFGGENDD 362
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V + + D A+K I EG+ E ++ L H ++ L V
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDV---AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
R ++++ +Y + ++ + R + + + + + YL S
Sbjct: 73 --CTKQRPIFIITEYMANGC--LLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLES 123
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLADLDPVVVTFWYRAP 202
LHRDL N LV +G+ VK++D G +R L + PV + P
Sbjct: 124 KQFLHRDLAARNCLVNDQGV----VKVSDFGLSRYVLDDEYTSSRGSKFPVR----WSPP 175
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLT 229
E+L+ ++ +K+ DIWA G + E+ +
Sbjct: 176 EVLMYSKFSSKS-DIWAFGVLMWEIYS 201
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR--LFNNPLKPLA 188
++ + + +LH+ + HRDLKP NIL + VKI D G N P++
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPN-QVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 189 --DLDPVVVTFWYRAPELLLG----ARHYTKAIDIWAIGCIFAELLTSEPIF 234
+L + Y APE++ A Y K D+W++G I LL+ P F
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 88
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL-- 131
H NV+NL+ + + ++ ++ + ++ + R+ + +L
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 132 ----LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKP 186
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP-DY 200
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 201 VRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 30/223 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 88
Query: 75 -HPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSL-- 131
H NV+NL+ + + ++ ++ + ++ + R+ + +L
Sbjct: 89 HHLNVVNLLGA-CTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 132 ----LYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKP 186
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLS----EKNVVKIXDFGLARDIYKDP-DY 200
Query: 187 LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 201 VRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 241
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 116/324 (35%), Gaps = 53/324 (16%)
Query: 2 DYEFKIKTSNERTKVEDLFDYEGCKVGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSM 61
+YE+ +K R +E G +G G +G V A S T ++
Sbjct: 33 EYEYDLKWEFPRENLEF-----GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA 87
Query: 62 SACREIALLRELK-------HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRA 113
+ AL+ ELK H N++NL+ ++L+F+Y + DL + ++ R
Sbjct: 88 DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PIYLIFEYCCYGDLLNYLRSKRE 145
Query: 114 A--------------KANXXXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILV 159
+ YQ+ G+ +L +HRDL N+LV
Sbjct: 146 KFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV 205
Query: 160 MGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA 219
+ VKI D G AR + + + + W APE L YT D+W+
Sbjct: 206 THGKV----VKICDFGLARDIMSDSNYVVRGNARLPVKW-MAPESLFEG-IYTIKSDVWS 259
Query: 220 IGCIFAELLT-----------SEPIFHCRQEDIKTSNPYHHDQLDRIFSVMGFPLEKDWE 268
G + E+ + + Q K P++ + I+ +M + W
Sbjct: 260 YGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATE--EIYIIM----QSCWA 313
Query: 269 -DIRKMPEHPTLLKDFNEQICKME 291
D RK P P L Q+ E
Sbjct: 314 FDSRKRPSFPNLTSFLGCQLADAE 337
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARR-KDNS--DTRDYALKQIEGTGLSMSAC----RE 66
T ++ +YE ++G+G +G V+K R KD S + L EG + RE
Sbjct: 15 TLADNEIEYEK-QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHII--KFHRAAKANXXXXXXX 124
+ ++ L HPN++ L L HN ++ + F DL+H + K H +
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEF-VPCGDLYHRLLDKAHPIKWS-------- 122
Query: 125 XXXXXSLLYQILDGIHYLHSN--WVLHRDLKPANILVMGEGIERGRV--KIADMGFARLF 180
L+ I GI Y+ + ++HRDL+ NI + E V K+AD G ++
Sbjct: 123 --VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD-ENAPVCAKVADFGLSQ-- 177
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAELLTSEPIF 234
+ + + ++ F + APE +GA YT+ D ++ I +LT E F
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 125
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 184
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP- 239
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 240 DYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 79
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 138
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP- 193
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 194 DYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 33/234 (14%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQIEGTG-LSMSACREIALLRELKHPNVINLISV 84
K+G GT+G V + DN + YA+K + + SA E +L+++++ ++ N V
Sbjct: 42 KMGDGTFGRVLLCQHIDNK--KYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 85 -----FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
F+ ++ + L+F+ L+ II + N + +IL +
Sbjct: 100 KYHGKFMYYDH--MCLIFEPLGPSLYEII-----TRNNYNGFHIEDIKLYCI--EILKAL 150
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRV---KIADMGFARLFNNPLKPLADLDPVVVT 196
+YL + H DLKP NIL+ E+ + ++ D +++ + +D T
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT 210
Query: 197 F------------WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 238
F YRAPE++L + + D+W+ GC+ AEL T +F +
Sbjct: 211 FKSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHE 263
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 90
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KEAPEDLYKDFLTL 149
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP- 204
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 205 DYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 79
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 138
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP- 193
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 194 DYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 30/225 (13%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACREIALLRELK------ 74
G +GRG +G V +A + R A+K ++ G + S R AL+ ELK
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHR--ALMSELKILIHIG 88
Query: 75 -HPNVINLISVFLSHNDR--------KVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXX 125
H NV+NL+ K L Y + + + A +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY-KVAPEDLYKDFLTL 147
Query: 126 XXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL 184
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP- 202
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ D + W APE + R YT D+W+ G + E+ +
Sbjct: 203 DYVRKGDARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 113/276 (40%), Gaps = 42/276 (15%)
Query: 27 VGRGTYGHVYKA--RRKDNSDTRDYALKQ-------IEGTGLSMSACREIALLRELKHPN 77
+G G +G V+ A + K+ + K+ IE L EIA+L ++H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG-KVTLEIAILSRVEHAN 90
Query: 78 VINLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILD 137
+I ++ +F + ++ + + DL+ I H + Q++
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH---------PRLDEPLASYIFRQLVS 141
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFA------RLFNNPLKPLADLD 191
+ YL ++HRD+K NI++ E +K+ D G A +LF
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIA----EDFTIKLIDFGSAAYLERGKLFYT--------- 188
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS--NPYH- 248
T Y APE+L+G + +++W++G L+ E F +E ++ + PY
Sbjct: 189 -FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV 247
Query: 249 HDQLDRIFSVMGFPLEKDWEDIRKMPEHPTLLKDFN 284
+L + S + P+ + + K+ P + + N
Sbjct: 248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHP 76
G +G G +G V KA K + A+K ++ S S R E +L+++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHP 86
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX---------------X 120
+VI L D + L+ +YA++ L ++ R
Sbjct: 87 HVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
S +QI G+ YL ++HRDL NILV E ++KI+D G +R
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVA----EGRKMKISDFGLSRDV 200
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
+ + W L YT D+W+ G + E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTL---------- 248
Query: 241 IKTSNPYHHDQLDRIFSVM 259
NPY +R+F+++
Sbjct: 249 --GGNPYPGIPPERLFNLL 265
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 98/259 (37%), Gaps = 44/259 (16%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHP 76
G +G G +G V KA K + A+K ++ S S R E +L+++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHP 86
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX---------------X 120
+VI L D + L+ +YA++ L ++ R
Sbjct: 87 HVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
S +QI G+ YL ++HRDL NILV E ++KI+D G +R
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA----EGRKMKISDFGLSRDV 200
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 240
+ + W L YT D+W+ G + E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLF--DHIYTTQSDVWSFGVLLWEIVTL---------- 248
Query: 241 IKTSNPYHHDQLDRIFSVM 259
NPY +R+F+++
Sbjct: 249 --GGNPYPGIPPERLFNLL 265
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 41/144 (28%)
Query: 131 LLYQILDGIHYLHSNW-VLHRDLKPANIL----------VMGEGIERGR----------V 169
++ Q+L G+ YLH+ ++H D+KP NIL + E E R V
Sbjct: 151 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 210
Query: 170 KIADMGFARLFNNPLKP---------LADLDPV----------VVTFWYRAPELLLGARH 210
A NPL+P +ADL + T YR+ E+L+G+ +
Sbjct: 211 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 270
Query: 211 YTKAIDIWAIGCIFAELLTSEPIF 234
T A DIW+ C+ EL T + +F
Sbjct: 271 NTPA-DIWSTACMAFELATGDYLF 293
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 22/231 (9%)
Query: 13 RTKVEDLFDYE-----GCKVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-- 64
+ K+ED+ E G +G+G +G V +A+ ++++ A+K ++ ++ S
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 65 --REIALLRELKHPNVINLISVFLSHNDRK----VWLLFDYAEHDLWHIIKFHRAAKANX 118
RE A ++E HP+V L+ V L + ++ + +H H F A++
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH--AFLLASRIGE 129
Query: 119 XXXXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR 178
+ I G+ YL S +HRDL N ++ E V +AD G +R
Sbjct: 130 NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML----AEDMTVCVADFGLSR 185
Query: 179 LFNNPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W L YT D+WA G E++T
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALES--LADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 43/231 (18%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-------------EIALLREL 73
+G G +G VY+ Y + E +++ C+ E +++ L
Sbjct: 16 LGEGFFGEVYEGV---------YTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 74 KHPNVINLISVFLSHNDRKVWLLFD-YAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
HP+++ LI + + W++ + Y +L H + + N SL
Sbjct: 67 DHPHIVKLIGII---EEEPTWIIMELYPYGELGHYL------ERNKNSLKVLTLVLYSL- 116
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
QI + YL S +HRD+ NILV VK+ D G +R + A +
Sbjct: 117 -QICKAMAYLESINCVHRDIAVRNILVASPEC----VKLGDFGLSRYIEDEDYYKASVTR 171
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+ + + +PE + R +T A D+W E+L+ +P F +D+
Sbjct: 172 LPIK--WMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 43/231 (18%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-------------EIALLREL 73
+G G +G VY+ Y + E +++ C+ E +++ L
Sbjct: 20 LGEGFFGEVYEGV---------YTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 74 KHPNVINLISVFLSHNDRKVWLLFD-YAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
HP+++ LI + + W++ + Y +L H + + N SL
Sbjct: 71 DHPHIVKLIGII---EEEPTWIIMELYPYGELGHYL------ERNKNSLKVLTLVLYSL- 120
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
QI + YL S +HRD+ NILV VK+ D G +R + A +
Sbjct: 121 -QICKAMAYLESINCVHRDIAVRNILVASPEC----VKLGDFGLSRYIEDEDYYKASVTR 175
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+ + + +PE + R +T A D+W E+L+ +P F +D+
Sbjct: 176 LPIK--WMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 41/144 (28%)
Query: 131 LLYQILDGIHYLHSNW-VLHRDLKPANIL----------VMGEGIERGR----------V 169
++ Q+L G+ YLH+ ++H D+KP NIL + E E R V
Sbjct: 135 IIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAV 194
Query: 170 KIADMGFARLFNNPLKP---------LADLDPV----------VVTFWYRAPELLLGARH 210
A NPL+P +ADL + T YR+ E+L+G+ +
Sbjct: 195 STAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGY 254
Query: 211 YTKAIDIWAIGCIFAELLTSEPIF 234
T A DIW+ C+ EL T + +F
Sbjct: 255 NTPA-DIWSTACMAFELATGDYLF 277
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 22/210 (10%)
Query: 26 KVGRGTYGHVYKARRKDNSDTRDYALKQI-EGTGLSMSACREIALLRELKHPNVINLISV 84
++G G +G V+ + A+K I EG E ++ +L HP ++ L V
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKV---AIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 85 FLSHNDRKVWLLFDYAEHD-LWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLH 143
L + L+ ++ EH L ++ R A + + +G+ YL
Sbjct: 72 CLEQA--PICLVTEFMEHGCLSDYLRTQRGLFA--------AETLLGMCLDVCEGMAYLE 121
Query: 144 SNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPE 203
V+HRDL N LV E +K++D G R + + V + +PE
Sbjct: 122 EACVIHRDLAARNCLVG----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--WASPE 175
Query: 204 LLLGARHYTKAIDIWAIGCIFAELLTSEPI 233
+ +R+ +K+ D+W+ G + E+ + I
Sbjct: 176 VFSFSRYSSKS-DVWSFGVLMWEVFSEGKI 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 78 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 137 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 193 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAA-KANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 91 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 150 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 206 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 82 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 141 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 197 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 226
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 43/231 (18%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR-------------EIALLREL 73
+G G +G VY+ Y + E +++ C+ E +++ L
Sbjct: 32 LGEGFFGEVYEGV---------YTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 74 KHPNVINLISVFLSHNDRKVWLLFD-YAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLL 132
HP+++ LI + + W++ + Y +L H + + N SL
Sbjct: 83 DHPHIVKLIGII---EEEPTWIIMELYPYGELGHYL------ERNKNSLKVLTLVLYSL- 132
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP 192
QI + YL S +HRD+ NILV VK+ D G +R + A +
Sbjct: 133 -QICKAMAYLESINCVHRDIAVRNILVASPEC----VKLGDFGLSRYIEDEDYYKASVTR 187
Query: 193 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDI 241
+ + + +PE + R +T A D+W E+L+ +P F +D+
Sbjct: 188 LPIK--WMSPE-SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+G+G +G V++ + R + + ++ ++ E + + + +LR H N++ I+
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLR---HENILGFIAAD 105
Query: 86 LSHNDR--KVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
N ++WL+ DY EH L+ + + + L+ + G
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP--VVVTFWYR 200
+ + HRDLK NILV + G IAD+G A ++ + D+ P V T Y
Sbjct: 166 PA--IAHRDLKSKNILVK----KNGTCCIADLGLAVRHDSATDTI-DIAPNHRVGTKRYM 218
Query: 201 APELL---LGARHYT--KAIDIWAIGCIFAEL 227
APE+L + +H+ K DI+A+G +F E+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 37/236 (15%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARR-KDNS--DTRDYALKQIEGTGLSMSAC----RE 66
T ++ +YE ++G+G +G V+K R KD S + L EG + RE
Sbjct: 15 TLADNEIEYEK-QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHII--KFHRAAKANXXXXXXX 124
+ ++ L HPN++ L L HN ++ + F DL+H + K H +
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEF-VPCGDLYHRLLDKAHPIKWS-------- 122
Query: 125 XXXXXSLLYQILDGIHYLHSN--WVLHRDLKPANILVMGEGIERGRV--KIADMGFARLF 180
L+ I GI Y+ + ++HRDL+ NI + E V K+AD G ++
Sbjct: 123 --VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD-ENAPVCAKVADFGTSQ-- 177
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAELLTSEPIF 234
+ + + ++ F + APE +GA YT+ D ++ I +LT E F
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 84 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 143 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 199 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 228
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 131 LLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIA--DMGFARLFNNPLKPLA 188
++ + + +LH+ + HRDLKP NIL + VKI D+G N P++
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPN-QVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 189 --DLDPVVVTFWYRAPELLLG----ARHYTKAIDIWAIGCIFAELLTSEPIF 234
+L + Y APE++ A Y K D+W++G I LL+ P F
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+G+G +G V++ + R + + ++ ++ E + + + +LR H N++ I+
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLR---HENILGFIAAD 67
Query: 86 LSHNDR--KVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
N ++WL+ DY EH L+ + + + L+ + G
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP--VVVTFWYR 200
+ + HRDLK NILV + G IAD+G A ++ + D+ P V T Y
Sbjct: 128 PA--IAHRDLKSKNILVK----KNGTCCIADLGLAVRHDSATDTI-DIAPNHRVGTKRYM 180
Query: 201 APELL---LGARHYT--KAIDIWAIGCIFAEL 227
APE+L + +H+ K DI+A+G +F E+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 84 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 143 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 197
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 198 --RWMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 228
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+G+G +G V++ + R + + ++ ++ E + + + +LR H N++ I+
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLR---HENILGFIAAD 69
Query: 86 LSHNDR--KVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
N ++WL+ DY EH L+ + + + L+ + G
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP--VVVTFWYR 200
+ + HRDLK NILV + G IAD+G A ++ + D+ P V T Y
Sbjct: 130 PA--IAHRDLKSKNILVK----KNGTCCIADLGLAVRHDSATDTI-DIAPNHRVGTKRYM 182
Query: 201 APELL---LGARHYT--KAIDIWAIGCIFAEL 227
APE+L + +H+ K DI+A+G +F E+
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 134
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 135 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 191 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 54/264 (20%)
Query: 24 GCKVGRGTYGHVYKARR---KDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHP 76
G +G G +G V KA K + A+K ++ S S R E +L+++ HP
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHP 86
Query: 77 NVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXX---------------X 120
+VI L D + L+ +YA++ L ++ R
Sbjct: 87 HVIKLYGA--CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 121 XXXXXXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF 180
S +QI G+ YL ++HRDL NILV E ++KI+D G +R
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA----EGRKMKISDFGLSR-- 198
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARH-----YTKAIDIWAIGCIFAELLTSEPIFH 235
+ + D V R P + YT D+W+ G + E++T
Sbjct: 199 -----DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL----- 248
Query: 236 CRQEDIKTSNPYHHDQLDRIFSVM 259
NPY +R+F+++
Sbjct: 249 -------GGNPYPGIPPERLFNLL 265
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 85 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 144 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 200 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 229
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+G+G +G V++ + R + + ++ ++ E + + + +LR H N++ I+
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLR---HENILGFIAAD 66
Query: 86 LSHNDR--KVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
N ++WL+ DY EH L+ + + + L+ + G
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP--VVVTFWYR 200
+ + HRDLK NILV + G IAD+G A ++ + D+ P V T Y
Sbjct: 127 PA--IAHRDLKSKNILVK----KNGTCCIADLGLAVRHDSATDTI-DIAPNHRVGTKRYM 179
Query: 201 APELL---LGARHYT--KAIDIWAIGCIFAEL 227
APE+L + +H+ K DI+A+G +F E+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 85 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 134
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 135 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 191 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+G+G +G V++ + R + + ++ ++ E + + + +LR H N++ I+
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLR---HENILGFIAAD 72
Query: 86 LSHNDR--KVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
N ++WL+ DY EH L+ + + + L+ + G
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP--VVVTFWYR 200
+ + HRDLK NILV + G IAD+G A ++ + D+ P V T Y
Sbjct: 133 PA--IAHRDLKSKNILVK----KNGTCCIADLGLAVRHDSATDTI-DIAPNHRVGTKRYM 185
Query: 201 APELL---LGARHYT--KAIDIWAIGCIFAEL 227
APE+L + +H+ K DI+A+G +F E+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 18/182 (9%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXX 124
E +++ + HPN+I L V R ++ +Y E+ L ++ H
Sbjct: 100 EASIMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDG--------QFT 149
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+L + G+ YL +HRDL N+LV + K++D G +R+ +
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV----CKVSDFGLSRVLEDDP 205
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDIK 242
+ + APE + R ++ A D+W+ G + E+L P ++ D+
Sbjct: 206 DAAXTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 243 TS 244
+S
Sbjct: 265 SS 266
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 129 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 185 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 124
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 125 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 181 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G+G +G V + N A+K I+ + + E +++ +L+H N++ L+ V +
Sbjct: 20 IGKGEFGDVMLGDYRGNK----VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 87 SHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNW 146
++++ +Y ++ + R+ + + + + YL N
Sbjct: 76 EEKG-GLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLL----KFSLDVCEAMEYLEGNN 128
Query: 147 VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLL 206
+HRDL N+LV + + K++D G + + + D + + APE L
Sbjct: 129 FVHRDLAARNVLVSEDNV----AKVSDFGLTK------EASSTQDTGKLPVKWTAPEALR 178
Query: 207 GARHYTKAIDIWAIGCIFAELLT 229
A TK+ D+W+ G + E+ +
Sbjct: 179 EAAFSTKS-DVWSFGILLWEIYS 200
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 27 VGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVF 85
+G+G +G V++ + R + + ++ ++ E + + + +LR H N++ I+
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLR---HENILGFIAAD 92
Query: 86 LSHNDR--KVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
N ++WL+ DY EH L+ + + + L+ + G
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDP--VVVTFWYR 200
+ + HRDLK NILV + G IAD+G A ++ + D+ P V T Y
Sbjct: 153 PA--IAHRDLKSKNILVK----KNGTCCIADLGLAVRHDSATDTI-DIAPNHRVGTKRYM 205
Query: 201 APELL---LGARHYT--KAIDIWAIGCIFAEL 227
APE+L + +H+ K DI+A+G +F E+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G+G +G V + N A+K I+ + + E +++ +L+H N++ L+ V +
Sbjct: 201 IGKGEFGDVMLGDYRGNK----VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 87 SHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNW 146
++++ +Y ++ + R+ + + + + YL N
Sbjct: 257 EEKG-GLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLL----KFSLDVCEAMEYLEGNN 309
Query: 147 VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLL 206
+HRDL N+LV + + K++D G + + + D + + APE L
Sbjct: 310 FVHRDLAARNVLVSEDNV----AKVSDFGLTK------EASSTQDTGKLPVKWTAPEALR 359
Query: 207 GARHYTKAIDIWAIGCIFAELLT 229
+ TK+ D+W+ G + E+ +
Sbjct: 360 EKKFSTKS-DVWSFGILLWEIYS 381
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLISV 84
+G G +G VYK +D + ALK+ E + EI L +HP++++LI
Sbjct: 47 IGHGVFGKVYKGVLRDGAKV---ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
N+ + L++ Y E+ +K H ++ + G+HYLH+
Sbjct: 104 CDERNE--MILIYKYMENG---NLKRHLYG-SDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
++HRD+K NIL+ E KI D G ++ L V T Y PE
Sbjct: 158 RAIIHRDVKSINILLD----ENFVPKITDFGISKK-GTELDQTHLXXVVKGTLGYIDPEY 212
Query: 205 LLGARHYTKAIDIWAIGCIFAELLTS 230
+ R T+ D+++ G + E+L +
Sbjct: 213 FIKGR-LTEKSDVYSFGVVLFEVLCA 237
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 124
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 125 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 181 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 79 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 128
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 129 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 185 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQ--IEGTGLSMSACREIALLRELKHPNVINLISV 84
+G G +G VYK +D + ALK+ E + EI L +HP++++LI
Sbjct: 47 IGHGVFGKVYKGVLRDGAKV---ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF 103
Query: 85 FLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHS 144
N+ + L++ Y E+ +K H ++ + G+HYLH+
Sbjct: 104 CDERNE--MILIYKYMENG---NLKRHLYG-SDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 145 NWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPEL 204
++HRD+K NIL+ E KI D G ++ L V T Y PE
Sbjct: 158 RAIIHRDVKSINILLD----ENFVPKITDFGISKK-GTELGQTHLXXVVKGTLGYIDPEY 212
Query: 205 LLGARHYTKAIDIWAIGCIFAELLTS 230
+ R T+ D+++ G + E+L +
Sbjct: 213 FIKGR-LTEKSDVYSFGVVLFEVLCA 237
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 26 KVGRGTYGHVYKAR-RKDNSDTRDYALKQIEGTGLSMSAC-----REIALLRELKHPNVI 79
K+G G++G V + + T A+K ++ LS RE+ + L H N+I
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 80 NLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGI 139
L V L+ + V L L ++ H+ Q+ +G+
Sbjct: 75 RLYGVVLTPPMKMVTELAPLGS--LLDRLRKHQG--------HFLLGTLSRYAVQVAEGM 124
Query: 140 HYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWY 199
YL S +HRDL N+L+ R VKI D G R + V F +
Sbjct: 125 GYLESKRFIHRDLAARNLLL----ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 200 RAPELLLGARHYTKAIDIWAIGCIFAELLT 229
APE L R ++ A D W G E+ T
Sbjct: 181 CAPE-SLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 21 DYEGCKV-GRGTYGHVYKARRKDNSDT-RDYALKQIEGTGLSMSACR------EIALLRE 72
++E KV G G YG V+ R+ DT + YA+K ++ + A E +L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 114
Query: 73 LKH-PNVINLISVFLSHNDRKVWLLFDYAEHD--LWHIIKFHRAAKANXXXXXXXXXXXX 129
++ P ++ L F + K+ L+ DY H+ + R +
Sbjct: 115 IRQSPFLVTLHYAF--QTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY-------- 164
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLAD 189
+ +I+ + +LH +++RD+K NIL+ G V + D G ++ F +AD
Sbjct: 165 --VGEIVLALEHLHKLGIIYRDIKLENILLD----SNGHVVLTDFGLSKEF------VAD 212
Query: 190 LDPVVVTFW----YRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 239
F Y AP+++ G + KA+D W++G + ELLT F E
Sbjct: 213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI +G++
Sbjct: 79 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAEGMN 128
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 129 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 185 LESIL--HRIYTHQSDVWSYGVTVWELMT 211
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 113 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N +V E VKI D G R ++ K L PV
Sbjct: 172 GMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 227
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 228 ---WMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G+G +G V + N A+K I+ + + E +++ +L+H N++ L+ V +
Sbjct: 29 IGKGEFGDVMLGDYRGNK----VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 87 SHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNW 146
++++ +Y ++ + R+ + + + + YL N
Sbjct: 85 EEKG-GLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLL----KFSLDVCEAMEYLEGNN 137
Query: 147 VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLL 206
+HRDL N+LV + + K++D G + + + D + + APE L
Sbjct: 138 FVHRDLAARNVLVSEDNV----AKVSDFGLTK------EASSTQDTGKLPVKWTAPEALR 187
Query: 207 GARHYTKAIDIWAIGCIFAELLT 229
+ TK+ D+W+ G + E+ +
Sbjct: 188 EKKFSTKS-DVWSFGILLWEIYS 209
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 86/212 (40%), Gaps = 18/212 (8%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+GRG +G VYK R D LK+ G + E+ ++ H N++ L +
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97
Query: 87 SHNDRKVWLLFDY-AEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSN 145
+ +R L++ Y A + ++ ++ S G+ YLH +
Sbjct: 98 TPTER--LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA-----RGLAYLHDH 150
Query: 146 W---VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAP 202
++HRD+K ANIL+ E + D G A+L + K V + AP
Sbjct: 151 CDPKIIHRDVKAANILL----DEEFEAVVGDFGLAKLMD--YKDXHVXXAVRGXIGHIAP 204
Query: 203 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 234
E L + K D++ G + EL+T + F
Sbjct: 205 EYLSTGKSSEKT-DVFGYGVMLLELITGQRAF 235
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLISVFL 86
+G+G +G V + N A+K I+ + + E +++ +L+H N++ L+ V +
Sbjct: 14 IGKGEFGDVMLGDYRGNK----VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 87 SHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYLHSNW 146
++++ +Y ++ + R+ + + + + YL N
Sbjct: 70 EEKG-GLYIVTEYMAKG--SLVDYLRSRGRSVLGGDCLL----KFSLDVCEAMEYLEGNN 122
Query: 147 VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRAPELLL 206
+HRDL N+LV + + K++D G + + + D + + APE L
Sbjct: 123 FVHRDLAARNVLVSEDNV----AKVSDFGLTK------EASSTQDTGKLPVKWTAPEALR 172
Query: 207 GARHYTKAIDIWAIGCIFAELLT 229
+ TK+ D+W+ G + E+ +
Sbjct: 173 EKKFSTKS-DVWSFGILLWEIYS 194
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 83 LLGICLTSTVQLIMQLMPFG-----XLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 132
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 133 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 189 LESIL--HRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 82 LLGICLTSTVQLITQLMPFG-----XLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 18/182 (9%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXX 124
E +++ + HPN+I L V R ++ +Y E+ L ++ H
Sbjct: 100 EASIMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDG--------QFT 149
Query: 125 XXXXXSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPL 184
+L + G+ YL +HRDL N+LV + K++D G +R+ +
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLV----CKVSDFGLSRVLEDDP 205
Query: 185 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT--SEPIFHCRQEDIK 242
+ + APE + R ++ A D+W+ G + E+L P ++ D+
Sbjct: 206 DAAYTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 243 TS 244
+S
Sbjct: 265 SS 266
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 66 EIALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHIIKF--HRAAKANXXXXXX 123
E+ ++ ++K+ + + ++++ V+++++Y E+D I+KF +
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDE--VYIIYEYMEND--SILKFDEYFFVLDKNYTCFI 148
Query: 124 XXXXXXSLLYQILDGIHYLHSNW-VLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFN 181
++ +L+ Y+H+ + HRD+KP+NIL+ + GRVK++D G + + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD----KNGRVKLSDFGESEYMVD 204
Query: 182 NPLKPLADLDPVVVTFWYRAPELLLGARHYTKA-IDIWAIG-CIFAELLTSEP 232
+K T+ + PE Y A +DIW++G C++ P
Sbjct: 205 KKIKGSRG------TYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 86 LLGICLTSTVQLIMQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 135
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 136 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 192 LESIL--HRIYTHQSDVWSYGVTVWELMT 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 8/109 (7%)
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLF---NNPLKP 186
+++ QI +HYLH+ + HRD+KP N L + +K+ D G ++ F NN
Sbjct: 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTN--KSFEIKLVDFGLSKEFYKLNN--GE 227
Query: 187 LADLDPVVVTFWYRAPELL-LGARHYTKAIDIWAIGCIFAELLTSEPIF 234
+ T ++ APE+L Y D W+ G + LL F
Sbjct: 228 YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 85 LLGICLTSTVQLIMQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 134
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 82 LLGICLTSTVQLIMQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 84 LLGICLTSTVQLIMQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 133
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 83 LLGICLTSTVQLIMQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 132
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 133 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 189 LESIL--HRIYTHQSDVWSYGVTVWELMT 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 92 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 141
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 142 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 198 LESIL--HRIYTHQSDVWSYGVTVWELMT 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 107 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 156
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 157 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 213 LESIL--HRIYTHQSDVWSYGVTVWELMT 239
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 85 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 134
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 76 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 125
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 126 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 182 LESIL--HRIYTHQSDVWSYGVTVWELMT 208
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 130 SLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLA 188
S +Q+ G+ +L S +HRDL NIL+ E VKI D G AR ++ NP +
Sbjct: 203 SYSFQVARGMEFLSSRKCIHRDLAARNILLS----ENNVVKICDFGLARDIYKNP-DYVR 257
Query: 189 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
D + W APE + + TK+ D+W+ G + E+ +
Sbjct: 258 KGDTRLPLKWM-APESIFDKIYSTKS-DVWSYGVLLWEIFS 296
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 88 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 137
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 138 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 194 LESIL--HRIYTHQSDVWSYGVTVWELMT 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 85 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 134
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 89 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 138
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 139 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 195 LESIL--HRIYTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 82 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L+ +H +H + ++H DLKPAN L++ G +K+ D G A P D V
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQM-QPDTTSVVKDSQV 217
Query: 195 VTFWYRAPELL----------LGARHYTKAIDIWAIGCIF 224
T Y PE + + D+W++GCI
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 85 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 134
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 135 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 191 LESIL--HRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 84 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 133
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLD 191
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P + D
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP-DYVRKGD 259
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ W APE + R YT D+W+ G + E+ +
Sbjct: 260 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 295
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 26 KVGRGTYGHVY----KARRKDNSDTRDYALKQI-EGTGLS--MSACREIALLRELKHPNV 78
++G+G++G VY K KD +TR A+K + E + + E ++++E +V
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 79 INLISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRA-AKANXXXXXXXXXXXXSLLYQILD 137
+ L+ V +S + ++ DL ++ R + N + +I D
Sbjct: 78 VRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 138 GIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPL--KPLADLDPVV 194
G+ YL++N +HRDL N V E VKI D G R ++ K L PV
Sbjct: 137 GMAYLNANKFVHRDLAARNCXV----AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV- 191
Query: 195 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
W L G +T D+W+ G + E+ T
Sbjct: 192 --RWMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 82 LLGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 131
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 188 LESIL--HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLD 191
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P + D
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP-DYVRKGD 261
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ W APE + R YT D+W+ G + E+ +
Sbjct: 262 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLD 191
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P + D
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP-DYVRKGD 252
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ W APE + R YT D+W+ G + E+ +
Sbjct: 253 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 288
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 37/236 (15%)
Query: 14 TKVEDLFDYEGCKVGRGTYGHVYKARR-KDNS--DTRDYALKQIEGTGLSMSAC----RE 66
T ++ +YE ++G+G +G V+K R KD S + L EG + RE
Sbjct: 15 TLADNEIEYEK-QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQRE 73
Query: 67 IALLRELKHPNVINLISVFLSHNDRKVWLLFDYAEHDLWHII--KFHRAAKANXXXXXXX 124
+ ++ L HPN++ L L HN ++ + F DL+H + K H +
Sbjct: 74 VFIMSNLNHPNIVKLYG--LMHNPPRMVMEF-VPCGDLYHRLLDKAHPIKWS-------- 122
Query: 125 XXXXXSLLYQILDGIHYLHSN--WVLHRDLKPANILVMGEGIERGRV--KIADMGFARLF 180
L+ I GI Y+ + ++HRDL+ NI + E V K+AD ++
Sbjct: 123 --VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD-ENAPVCAKVADFSLSQ-- 177
Query: 181 NNPLKPLADLDPVVVTFWYRAPELLLGARH--YTKAIDIWAIGCIFAELLTSEPIF 234
+ + + ++ F + APE +GA YT+ D ++ I +LT E F
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 85/220 (38%), Gaps = 44/220 (20%)
Query: 26 KVGRGTYGHVYKA---RRKDNSDTRDYALKQIEGTGLSMSACREIALLRELKHPNVINLI 82
++G G +G V + RK D LKQ + RE ++ +L +P ++ LI
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
V + + L+ + A H KF + LL+Q+ G+ YL
Sbjct: 77 GVCQAE---ALMLVMEMAGGGPLH--KFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 126
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN-------------PLKPLAD 189
+HRDL N+L+ + R KI+D G ++ PLK
Sbjct: 127 EEKNFVHRDLAARNVLL----VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLK---- 178
Query: 190 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
WY APE + R ++ D+W+ G E L+
Sbjct: 179 --------WY-APE-CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 133 YQILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFAR-LFNNPLKPLADLD 191
+Q+ G+ +L S +HRDL NIL+ E+ VKI D G AR ++ +P + D
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLS----EKNVVKICDFGLARDIYKDP-DYVRKGD 254
Query: 192 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ W APE + R YT D+W+ G + E+ +
Sbjct: 255 ARLPLKWM-APETIFD-RVYTIQSDVWSFGVLLWEIFS 290
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 21/208 (10%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIE-GTGLSMSACREIA----LLRELKHPNVINL 81
+G G +G VYK + + +E S A +EI ++ + +P+V L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 82 ISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHY 141
+ + L+ + + L + ++ + R K N + QI G++Y
Sbjct: 117 LGICLTSTVQLITQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMNY 166
Query: 142 LHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYRA 201
L ++HRDL N+LV VKI D G A+L K V W
Sbjct: 167 LEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 202 PELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 223 ESIL--HRIYTHQSDVWSYGVTVWELMT 248
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L+ +H +H + ++H DLKPAN L++ G +K+ D G A P D V
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQM-QPDTTSVVKDSQV 170
Query: 195 VTFWYRAPELL----------LGARHYTKAIDIWAIGCIF 224
T Y PE + + D+W++GCI
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L+ +H +H + ++H DLKPAN L++ G +K+ D G A P D V
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQM-QPDTTSVVKDSQV 217
Query: 195 VTFWYRAPELL----------LGARHYTKAIDIWAIGCIF 224
T Y PE + + D+W++GCI
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L+ +H +H + ++H DLKPAN L++ G +K+ D G A P D V
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQM-QPDTTSVVKDSQV 189
Query: 195 VTFWYRAPELL----------LGARHYTKAIDIWAIGCIF 224
T Y PE + + D+W++GCI
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 30/214 (14%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTGLSMSACR----EIALLRELKHPNVINLI 82
+G G +G V K + + +G + R E +++ + HPNVI+L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 83 SVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIHYL 142
V V ++ ++ E+ + F R +L I G+ YL
Sbjct: 101 GVVTKST--PVMIITEFMENG--SLDSFLRQNDGQFTVIQLV-----GMLRGIAAGMKYL 151
Query: 143 HSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV-------V 195
+HRDL NILV + K++D G +R + DP +
Sbjct: 152 ADMNYVHRDLAARNILVNSNLV----CKVSDFGLSRFLEDDTS-----DPTYTSALGGKI 202
Query: 196 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ APE + R +T A D+W+ G + E+++
Sbjct: 203 PIRWTAPE-AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 42/224 (18%)
Query: 27 VGRGTYGHVYKARRKDNSDTRDYALKQIEGTG--LSMSACREIALLRELK-HPNVINLIS 83
+ G + VY+A +D R+YALK++ + + +E+ +++L HPN++ S
Sbjct: 36 LAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 84 VFL-----SHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDG 138
S + +LL E +++F + ++ + YQ
Sbjct: 94 AASIGKEESDTGQAEFLLL--TELCKGQLVEFLKKMESRGPLSCDTVL---KIFYQTCRA 148
Query: 139 IHYLHSNW--VLHRDLKPANILVMGEGIERGRVKIADMGFARLFNN------PLKPLADL 190
+ ++H ++HRDLK N+L+ +G +K+ D G A ++ + A +
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGT----IKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 191 DPVV---VTFWYRAPELL-------LGARHYTKAIDIWAIGCIF 224
+ + T YR PE++ +G + DIWA+GCI
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQ-----DIWALGCIL 243
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 135 ILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVV 194
+L+ +H +H + ++H DLKPAN L++ G +K+ D G A P D V
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQM-QPDXXXVVKDSQV 189
Query: 195 VTFWYRAPELL----------LGARHYTKAIDIWAIGCIF 224
T Y PE + + D+W++GCI
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 23/209 (11%)
Query: 27 VGRGTYGHVYKARRKDNSDTRD--YALKQIEGTGLSMSACREIA----LLRELKHPNVIN 80
+G G +G VYK + A+K++ S A +EI ++ + +P+V
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 81 LISVFLSHNDRKVWLLFDYAEHDLWHIIKFHRAAKANXXXXXXXXXXXXSLLYQILDGIH 140
L+ + L+ + + L + ++ + R K N + QI G++
Sbjct: 84 LLGICLTSTVQLIMQLMPFG-----CLLDYVREHKDNIGSQYLL-----NWCVQIAKGMN 133
Query: 141 YLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLADLDPVVVTFWYR 200
YL ++HRDL N+LV VKI D G A+L K V W
Sbjct: 134 YLEDRRLVHRDLAARNVLVKTP----QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 201 APELLLGARHYTKAIDIWAIGCIFAELLT 229
+L R YT D+W+ G EL+T
Sbjct: 190 LESIL--HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 24 GCKVGRGTYGHVYKARR----KDNSDTRDYALKQIEGTGLSMSACREIALLRELK----- 74
G +G G +G V +A K+++ + A+K ++ T A + AL+ ELK
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTA---HADEKEALMSELKIMSHL 106
Query: 75 --HPNVINLISVFLSHNDRKVWLLFDYAEH-DLWHIIKFHRAAKANXXXXXXXXXXXXSL 131
H N++NL+ +H V ++ +Y + DL + ++ R A+A+ L
Sbjct: 107 GQHENIVNLLGA-CTHGG-PVLVITEYCCYGDLLNFLR--RKAEADLDKEDGRPLELRDL 162
Query: 132 LY---QILDGIHYLHSNWVLHRDLKPANILVMGEGIERGRVKIADMGFARLFNNPLKPLA 188
L+ Q+ G+ +L S +HRD+ N+L+ + KI D G AR N +
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV----AKIGDFGLARDIMNDSNYIV 218
Query: 189 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 229
+ + W APE + YT D+W+ G + E+ +
Sbjct: 219 KGNARLPVKWM-APESIFDCV-YTVQSDVWSYGILLWEIFS 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.141 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,106,526
Number of Sequences: 62578
Number of extensions: 362578
Number of successful extensions: 3407
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 766
Number of HSP's gapped (non-prelim): 1179
length of query: 291
length of database: 14,973,337
effective HSP length: 98
effective length of query: 193
effective length of database: 8,840,693
effective search space: 1706253749
effective search space used: 1706253749
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)