Query psy2177
Match_columns 677
No_of_seqs 413 out of 3201
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 18:15:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2177hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2uxw_A VERY-long-chain specifi 100.0 3.9E-97 1E-101 852.4 54.5 578 44-676 17-595 (607)
2 3owa_A Acyl-COA dehydrogenase; 100.0 2.8E-87 9.6E-92 768.8 53.8 537 52-676 13-591 (597)
3 2z1q_A Acyl-COA dehydrogenase; 100.0 4.2E-84 1.4E-88 741.0 45.1 529 47-676 4-569 (577)
4 2jif_A Short/branched chain sp 100.0 1.4E-65 4.7E-70 563.6 40.4 384 48-498 10-395 (404)
5 2d29_A Acyl-COA dehydrogenase; 100.0 8.5E-65 2.9E-69 553.5 38.8 370 73-498 7-378 (387)
6 2dvl_A Acyl-COA dehydrogenase; 100.0 9.9E-65 3.4E-69 550.2 37.9 361 73-498 3-365 (372)
7 1ukw_A Acyl-COA dehydrogenase; 100.0 1.3E-64 4.3E-69 550.7 38.5 365 73-498 5-371 (379)
8 3pfd_A Acyl-COA dehydrogenase; 100.0 3.5E-65 1.2E-69 557.9 34.1 366 73-498 19-386 (393)
9 1rx0_A Acyl-COA dehydrogenase 100.0 2.5E-64 8.4E-69 551.4 40.1 365 73-498 19-385 (393)
10 2vig_A Short-chain specific ac 100.0 3.1E-64 1.1E-68 550.0 40.8 366 73-498 6-373 (391)
11 3r7k_A Probable acyl COA dehyd 100.0 9.2E-65 3.1E-69 556.6 35.2 365 73-498 29-396 (403)
12 2pg0_A Acyl-COA dehydrogenase; 100.0 3.4E-64 1.2E-68 548.4 39.3 366 73-498 10-378 (385)
13 1buc_A Butyryl-COA dehydrogena 100.0 1.7E-64 5.7E-69 550.2 36.3 367 73-498 5-376 (383)
14 1egd_A Medium chain acyl-COA d 100.0 4.2E-64 1.4E-68 549.9 38.6 368 73-498 16-385 (396)
15 1ivh_A Isovaleryl-COA dehydrog 100.0 3.9E-64 1.3E-68 549.8 38.0 368 73-498 13-384 (394)
16 3p4t_A Putative acyl-COA dehyd 100.0 2.2E-64 7.6E-69 553.5 36.0 366 73-498 26-394 (403)
17 3nf4_A Acyl-COA dehydrogenase; 100.0 3.9E-64 1.3E-68 548.0 37.0 363 73-498 16-380 (387)
18 3ii9_A Glutaryl-COA dehydrogen 100.0 2.5E-64 8.4E-69 551.7 29.8 364 73-498 19-384 (396)
19 3sf6_A Glutaryl-COA dehydrogen 100.0 2.1E-63 7.3E-68 545.7 36.5 359 73-498 30-391 (403)
20 3swo_A Glutaryl-COA dehydrogen 100.0 8.1E-64 2.8E-68 548.1 32.0 359 73-498 26-386 (399)
21 2eba_A Putative glutaryl-COA d 100.0 3.8E-63 1.3E-67 540.1 36.8 361 73-498 11-374 (385)
22 2ix5_A Acyl-coenzyme A oxidase 100.0 2.8E-63 9.5E-68 550.7 34.3 361 73-498 55-417 (436)
23 1r2j_A Protein FKBI; polyketid 100.0 1.4E-63 4.9E-68 540.2 29.5 352 86-498 2-356 (366)
24 3mpi_A Glutaryl-COA dehydrogen 100.0 4E-63 1.4E-67 541.9 32.2 365 73-498 5-376 (397)
25 1siq_A GCD, glutaryl-COA dehyd 100.0 4E-62 1.4E-66 533.3 36.2 362 73-498 14-377 (392)
26 4hr3_A Putative acyl-COA dehyd 100.0 5.2E-63 1.8E-67 544.2 29.2 368 73-498 9-403 (415)
27 3mkh_A Nitroalkane oxidase; ox 100.0 2.5E-60 8.7E-65 526.3 34.1 369 73-498 7-409 (438)
28 2c12_A Nitroalkane oxidase; ox 100.0 1.9E-59 6.5E-64 519.7 37.2 371 73-498 6-412 (439)
29 2wbi_A Acyl-COA dehydrogenase 100.0 2.5E-60 8.4E-65 525.5 29.5 372 73-511 23-417 (428)
30 3mxl_A Nitrososynthase; flavin 100.0 6.4E-57 2.2E-61 491.6 27.6 356 73-498 9-386 (395)
31 3djl_A Protein AIDB; alpha hel 100.0 8E-55 2.7E-59 494.3 41.7 402 109-602 89-515 (541)
32 2or0_A Hydroxylase; APC7385, r 100.0 1.7E-55 5.9E-60 484.2 26.6 352 73-498 18-394 (414)
33 2jbr_A P-hydroxyphenylacetate 100.0 3E-55 1E-59 483.7 26.8 352 68-498 31-407 (422)
34 3m9v_A FAD-dependent oxidoredu 100.0 8E-55 2.7E-59 482.4 28.3 356 73-498 20-397 (439)
35 2rfq_A 3-HSA hydroxylase, oxyg 100.0 1.6E-54 5.3E-59 472.9 28.9 344 83-498 11-379 (394)
36 1w07_A Acyl-COA oxidase; oxido 100.0 1.5E-51 5.1E-56 478.0 40.2 501 82-673 32-588 (659)
37 2ddh_A Acyl-COA oxidase; beta 100.0 3E-48 1E-52 450.0 42.6 466 127-674 75-592 (661)
38 1u8v_A Gamma-aminobutyrate met 100.0 8.1E-38 2.8E-42 350.9 28.9 272 168-501 120-424 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 2E-37 6.8E-42 347.1 26.2 239 173-423 122-387 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 8.2E-34 2.8E-38 318.8 25.3 259 171-456 127-413 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.9 2.6E-26 8.9E-31 258.2 25.3 238 175-423 134-392 (517)
42 3owa_A Acyl-COA dehydrogenase; 91.0 1.2 4.2E-05 50.6 12.2 92 328-423 464-556 (597)
43 1rx0_A Acyl-COA dehydrogenase 89.1 2.6 8.8E-05 45.0 12.2 75 588-662 283-357 (393)
44 3p4t_A Putative acyl-COA dehyd 89.0 3.3 0.00011 44.3 13.0 83 588-670 292-374 (403)
45 2ix5_A Acyl-coenzyme A oxidase 88.3 3.2 0.00011 45.0 12.5 76 588-664 316-391 (436)
46 2pg0_A Acyl-COA dehydrogenase; 87.9 4.2 0.00014 43.0 12.8 82 588-670 277-358 (385)
47 3ii9_A Glutaryl-COA dehydrogen 87.6 6.8 0.00023 41.6 14.3 83 588-671 283-365 (396)
48 1siq_A GCD, glutaryl-COA dehyd 86.7 4.9 0.00017 42.7 12.5 76 588-664 276-351 (392)
49 2vig_A Short-chain specific ac 86.7 4.7 0.00016 42.8 12.4 74 588-662 272-345 (391)
50 3pfd_A Acyl-COA dehydrogenase; 86.6 3.5 0.00012 43.9 11.3 75 588-662 284-358 (393)
51 2eba_A Putative glutaryl-COA d 86.4 5.3 0.00018 42.3 12.6 74 588-662 273-346 (385)
52 3r7k_A Probable acyl COA dehyd 86.0 6.1 0.00021 42.1 12.9 82 588-670 295-376 (403)
53 1buc_A Butyryl-COA dehydrogena 85.8 5.5 0.00019 42.0 12.3 75 588-663 275-349 (383)
54 2dvl_A Acyl-COA dehydrogenase; 85.3 7.3 0.00025 40.9 12.9 76 588-664 264-339 (372)
55 1ukw_A Acyl-COA dehydrogenase; 84.9 6.9 0.00023 41.3 12.5 74 588-662 270-343 (379)
56 3mpi_A Glutaryl-COA dehydrogen 84.7 6.2 0.00021 41.8 12.1 82 588-669 274-355 (397)
57 1r2j_A Protein FKBI; polyketid 84.6 4.2 0.00014 42.8 10.6 77 588-664 254-330 (366)
58 2jif_A Short/branched chain sp 84.4 7 0.00024 41.8 12.4 75 588-663 294-368 (404)
59 2rfq_A 3-HSA hydroxylase, oxyg 84.2 11 0.00036 39.9 13.7 77 587-663 268-351 (394)
60 3swo_A Glutaryl-COA dehydrogen 84.2 7.1 0.00024 41.5 12.3 75 588-663 285-359 (399)
61 2d29_A Acyl-COA dehydrogenase; 84.0 7.8 0.00027 41.0 12.5 74 588-662 277-350 (387)
62 2wbi_A Acyl-COA dehydrogenase 83.5 3.1 0.00011 44.9 9.2 75 588-662 308-383 (428)
63 3sf6_A Glutaryl-COA dehydrogen 83.5 7.9 0.00027 41.3 12.3 75 588-663 290-364 (403)
64 2c12_A Nitroalkane oxidase; ox 83.4 8 0.00027 41.7 12.5 77 588-664 306-385 (439)
65 1egd_A Medium chain acyl-COA d 83.3 7 0.00024 41.5 11.8 76 588-664 284-359 (396)
66 2uxw_A VERY-long-chain specifi 82.8 5.3 0.00018 45.4 11.1 72 588-659 321-392 (607)
67 4hr3_A Putative acyl-COA dehyd 82.2 5.3 0.00018 42.7 10.4 76 588-663 300-376 (415)
68 1ivh_A Isovaleryl-COA dehydrog 81.8 6.8 0.00023 41.6 11.0 74 588-662 283-356 (394)
69 2z1q_A Acyl-COA dehydrogenase; 81.0 6.4 0.00022 44.4 10.9 78 588-665 292-382 (577)
70 3nf4_A Acyl-COA dehydrogenase; 80.9 7.7 0.00026 41.0 10.9 76 587-663 278-353 (387)
71 2jbr_A P-hydroxyphenylacetate 79.5 9.3 0.00032 40.9 11.2 77 587-663 296-379 (422)
72 2or0_A Hydroxylase; APC7385, r 78.9 9.4 0.00032 40.7 10.9 73 589-661 285-364 (414)
73 3mkh_A Nitroalkane oxidase; ox 78.3 14 0.00048 39.7 12.1 80 590-669 305-387 (438)
74 3djl_A Protein AIDB; alpha hel 72.7 21 0.00071 39.9 11.9 78 588-665 327-409 (541)
75 1w07_A Acyl-COA oxidase; oxido 62.0 40 0.0014 38.6 11.6 74 591-664 323-407 (659)
76 3mxl_A Nitrososynthase; flavin 59.9 55 0.0019 34.2 11.6 82 589-670 273-365 (395)
77 2ddh_A Acyl-COA oxidase; beta 51.7 44 0.0015 38.2 9.7 68 591-658 320-398 (661)
78 3hwc_A Chlorophenol-4-monooxyg 48.5 51 0.0017 36.6 9.2 71 592-662 316-390 (515)
79 3m9v_A FAD-dependent oxidoredu 45.4 64 0.0022 34.4 9.3 82 589-670 284-376 (439)
80 2yyk_A 4-hydroxyphenylacetate- 41.7 86 0.0029 34.3 9.7 71 592-662 312-386 (481)
81 1u8v_A Gamma-aminobutyrate met 36.6 79 0.0027 34.7 8.4 67 592-658 320-390 (490)
No 1
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=3.9e-97 Score=852.37 Aligned_cols=578 Identities=58% Similarity=0.928 Sum_probs=521.2
Q ss_pred hhcccCcchhHhhccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHHHhhCCCcccCcCCCCCHHHHHHHHHcCCCCC
Q psy2177 44 KAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKNDSLETVEPNTLEGLWDLGAFSL 123 (677)
Q Consensus 44 ~~~~~~~~f~~~lf~g~~~~~~~~~~p~~l~~e~~~~~~~l~~~~~~f~~~~~~p~~~d~~~~~p~e~~~~l~~~Gl~~l 123 (677)
..++++.||.+++|.|+++++++|+||+.+++|++++++++++.+++|+++.++|...|..+.+|+++|+.|++.||+++
T Consensus 17 ~~~~~~~~~~~~lf~g~~~~~~~~~~p~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~~~~p~~~~~~l~e~Gl~~l 96 (607)
T 2uxw_A 17 NLYFQSMSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGL 96 (607)
T ss_dssp ----CCCCHHHHHTTTCCCCTTTSSCCCCCCHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTSCCHHHHHHHHHTTTTCT
T ss_pred cCCCCCccHHHHhcCCCCCHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHhhcCHHHhccccCCCHHHHHHHHHcCCcCC
Confidence 57889999999999999999999999998999999999999999999999988887777888999999999999999999
Q ss_pred CCcccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCC
Q psy2177 124 QVPQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSD 203 (677)
Q Consensus 124 ~vP~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD 203 (677)
.+|++|||.|++..+++.+.|++++.|+++++++++|.+++...|..+|+++||++|||++++|++++|+++|||++|||
T Consensus 97 ~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD 176 (607)
T 2uxw_A 97 QVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSD 176 (607)
T ss_dssp TSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSC
T ss_pred CCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCC
Confidence 99999999999999999999999999999999998888777788899999999999999999999999999999999999
Q ss_pred CCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCC
Q psy2177 204 AGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKA 283 (677)
Q Consensus 204 ~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg 283 (677)
+.+++|+|++++||++|+|||+|+||||++.||+++|+|+++..+++.|.+.+|+++|+||++.|||++.+.|+++|+++
T Consensus 177 ~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg 256 (607)
T 2uxw_A 177 AASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKA 256 (607)
T ss_dssp GGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTT
T ss_pred cccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCC
Confidence 99999999998888889999999999999999999999999643322232236899999999999999999999999999
Q ss_pred CCceEEEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHH
Q psy2177 284 SNTAEVYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLA 363 (677)
Q Consensus 284 ~~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La 363 (677)
+++++|.|+||+||.+++||.+|+|++.++.+++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|+
T Consensus 257 ~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La 336 (607)
T 2uxw_A 257 SNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLA 336 (607)
T ss_dssp SCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHH
T ss_pred CCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhh
Q psy2177 364 RMALLHYVTESLAYMISGNMDNGSQDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAK 443 (677)
Q Consensus 364 ~m~~~~~aa~al~~~~a~~~d~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~ 443 (677)
+|.+.+++++++++.++..+|.+.++..++++++|+++++.+++++++++|++||+||+. +
T Consensus 337 ~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~-------------e------ 397 (607)
T 2uxw_A 337 RMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMK-------------E------ 397 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSS-------------T------
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC-------------c------
Confidence 999999999999999999999876666789999999999999999999999999999999 8
Q ss_pred hhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhccCCCcchhHHHHHHHHhhhHHHHHH
Q psy2177 444 ESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKNDSLETVEPNTLEGIQYAGGHLRELQK 523 (677)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~~~~~~~~ia~~~l~~~~~~l~~~~~ 523 (677)
+|++|+||| ++ ++.||||||+|++++ |++.++|++++.++...+
T Consensus 398 -------------------~~l~r~~Rd-----a~-----~~~i~eGt~~i~~~~-------ia~~glq~~~~~~~~~~~ 441 (607)
T 2uxw_A 398 -------------------PGVERVLRD-----LR-----IFRIFEGTNDILRLF-------VALQGCMDKGKELSGLGS 441 (607)
T ss_dssp -------------------TSHHHHHHH-----HG-----GGGTSSSCHHHHHHH-------HHHHHHHHHHHHHHGGGC
T ss_pred -------------------cHHHHHHHh-----cc-----cceeeCChHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 999999999 99 999999999999999 999999998888766677
Q ss_pred HhcCCCCchhHHHHHHHHHHHHHhcCCCCCCCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH
Q psy2177 524 AFKNPTAHLGLIIGEVKKRGLKSIGLSTPPSLHHVVHANLAESGVLCSKSVVLFGEAVESLLLKYGKGVVEEQFLLNRLA 603 (677)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~q~~l~rla 603 (677)
++++|..+.+..++.+.+.+.+.++......+.+..++.++..++.+++.+.+|..+++.++.+||++++++|+++.||+
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~ 521 (607)
T 2uxw_A 442 ALKNPFGNAGLLLGEAGKQLRRRAGLGSGLSLSGLVHPELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQRLA 521 (607)
T ss_dssp SCCCTTC--------------------CCCCCBTTBCGGGHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGGCHHHHHHHH
T ss_pred HhhcccccchHHHHHHHHHHHHHhhhcccccccccCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 88888888888888887777665543322122333478899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCcchHHHHHHHHhhc
Q psy2177 604 AAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSG-KKLDSYTKLGDIAKNELK 676 (677)
Q Consensus 604 ~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 676 (677)
|+++++|+|+++|+|+++++++|++++++|+.+|++||.++.+||+.++++|.++ .+.|.|+++++||++|++
T Consensus 522 d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~ 595 (607)
T 2uxw_A 522 DGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSDPWQQELYRNFKSISKALVE 595 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 889999999999999985
No 2
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=2.8e-87 Score=768.78 Aligned_cols=537 Identities=32% Similarity=0.497 Sum_probs=477.7
Q ss_pred hhHhhccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHHHhhCCCcc--cCcCC-CCCHHHHHHHHHcCCCCCCCccc
Q psy2177 52 FTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLK--NDSLE-TVEPNTLEGLWDLGAFSLQVPQD 128 (677)
Q Consensus 52 f~~~lf~g~~~~~~~~~~p~~l~~e~~~~~~~l~~~~~~f~~~~~~p~~--~d~~~-~~p~e~~~~l~~~Gl~~l~vP~e 128 (677)
.-.++|.+.++.+.+|+ |+.+++|| +++++.+++|+++.+.|.. .|+.. .+|+++|+.|.+.||+++.+|++
T Consensus 13 ~~~~f~~~~~~~~~~~~-p~~lt~eq----~~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee 87 (597)
T 3owa_A 13 KGGSFLVDEITIDQVFT-PEDFSSEH----KMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEE 87 (597)
T ss_dssp CTTGGGTSCCCGGGCCC-GGGCCHHH----HHHHHHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGG
T ss_pred cCCeeeeccCChhhcCC-ccCCCHHH----HHHHHHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChh
Confidence 35567788889988887 77699998 6899999999999887743 34443 57899999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCc
Q psy2177 129 LGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIK 208 (677)
Q Consensus 129 yGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~ 208 (677)
|||.|+++.+++.+.|++++.+ +.+..+..|.+++..+|..+|+++||++|||++++|++++|+|+|||++|||+.+++
T Consensus 88 ~GG~G~~~~~~~~v~Eel~~~~-~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~ 166 (597)
T 3owa_A 88 YGGIGLDKVSSALIAEKFSRAG-GFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAK 166 (597)
T ss_dssp GTCCCCCHHHHHHHHHHHGGGT-HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCC
T ss_pred hCCCCCCHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccce
Confidence 9999999999999999999875 555666778777777888999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceE
Q psy2177 209 TRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAE 288 (677)
Q Consensus 209 T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~ 288 (677)
|+|++++||++|+|||+|+||||++.||+++|+|++++ +++++|+||++.|||++.+.|+++|++++++++
T Consensus 167 T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~---------~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~ 237 (597)
T 3owa_A 167 TTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG---------EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRT 237 (597)
T ss_dssp CEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT---------TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEE
T ss_pred eEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC---------CceEEEEEeCCCCCeEEecccccccCCCCCceE
Confidence 99999989999999999999999999999999999841 379999999999999999999999999999999
Q ss_pred EEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHH
Q psy2177 289 VYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALL 368 (677)
Q Consensus 289 v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~ 368 (677)
|.|+||+||.+++||.+++|+..++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.++
T Consensus 238 v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~ 317 (597)
T 3owa_A 238 LILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAK 317 (597)
T ss_dssp EEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHH
T ss_pred EEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhCCCC------------------chHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhh
Q psy2177 369 HYVTESLAYMISGNMDNGSQ------------------DYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASAS 430 (677)
Q Consensus 369 ~~aa~al~~~~a~~~d~~~~------------------~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~ 430 (677)
++++++++|++++.+|.+.. +...+++++|+++++.+++++++++|++||+||+.
T Consensus 318 ~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi~GG~G~~~------- 390 (597)
T 3owa_A 318 TYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMA------- 390 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------
T ss_pred HHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccc-------
Confidence 99999999999998886421 34678999999999999999999999999999999
Q ss_pred HHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhccCCCcchhHHHH
Q psy2177 431 AAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKNDSLETVEPNTLEG 510 (677)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~~~~~~~~ia~~~ 510 (677)
+ +|++|+||| +| +.+||||||+|+++. |+...
T Consensus 391 ------e-------------------------~~ler~~RD-----ar-----~~~i~eGt~ei~r~~-------Ia~~l 422 (597)
T 3owa_A 391 ------E-------------------------YEIERMYRD-----SR-----INRIFEGTNEINRLI-------VPGTF 422 (597)
T ss_dssp ------T-------------------------SHHHHHHHH-----HG-----GGGTSSSCHHHHHHH-------HHHHH
T ss_pred ------c-------------------------ChHHHHHHH-----hh-----hhheeCcHHHHHHHH-------HHHHH
Confidence 8 999999999 99 999999999999999 88765
Q ss_pred HHHHhhhHHHHHHHhcCCCCchhHHHHHHHHHHHHHhcCCCCCCCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy2177 511 IQYAGGHLRELQKAFKNPTAHLGLIIGEVKKRGLKSIGLSTPPSLHHVVHANLAESGVLCSKSVVLFGEAVESLLLKYGK 590 (677)
Q Consensus 511 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~ 590 (677)
++.+. + ++..+ .+.+.+ +...+.... +. ...++.|+.+...++.++..|..+++.++.+||+
T Consensus 423 l~~~~----------k---~~~~~-~~~~~~-~~~~~~~~~-~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (597)
T 3owa_A 423 LRKAM----------K---GELPL-LQKAQK-LQEELMMMM-PE--EVGDEPLALQKYLVNNAKKIGLMVAGLAAQKYGK 484 (597)
T ss_dssp HHHHH----------T---TSSCH-HHHHHH-HHHHHTTC------CCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHh----------c---CCcch-hHHHHH-HHHHHhhcC-CC--ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 54322 2 11111 111111 111111111 11 1234679999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCchHHHHHHHHHHHHHHHHHHHH------------------
Q psy2177 591 GVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK-NLPSASHEQLLAELWCYEAAERVSQN------------------ 651 (677)
Q Consensus 591 ~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~-~~~~~~~e~~la~~~~~~~~~~~~~~------------------ 651 (677)
+++++|++|.||+|+++++|+|+++++||+|++|+ |+++++||+.||++||.++.+||+.+
T Consensus 485 ~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (597)
T 3owa_A 485 ALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETLIAVENGDMLRMML 564 (597)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHH
Confidence 99999999999999999999999999999999996 99999999999999999999999997
Q ss_pred --HHHhhcCCCCCcchHHHHHHHHhhc
Q psy2177 652 --LGALNSGKKLDSYTKLGDIAKNELK 676 (677)
Q Consensus 652 --~~~l~~~~~~~~~~~~~~~~~~~~~ 676 (677)
++.+......|.+...++||+.|++
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~a~~~~~ 591 (597)
T 3owa_A 565 SSLRKLTRHTPLNVIPKKREIAAKILE 591 (597)
T ss_dssp HHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHH
Confidence 8899999889999999999999975
No 3
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-84 Score=740.95 Aligned_cols=529 Identities=36% Similarity=0.512 Sum_probs=465.8
Q ss_pred ccCcchhHhhccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHHHhhCCCc--ccC-cCCCCCHHHHHHHHHcCCCCC
Q psy2177 47 KESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPL--KND-SLETVEPNTLEGLWDLGAFSL 123 (677)
Q Consensus 47 ~~~~~f~~~lf~g~~~~~~~~~~p~~l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d-~~~~~p~e~~~~l~~~Gl~~l 123 (677)
-+..+|.+++|.|+ +++++||||+ +++|+ +++++.+++|+++.++|. +.+ ....+|+++|+.|++.||+++
T Consensus 4 ~~~~~~~~~~f~~~-~~~~~~~~~~-~~~e~----~~l~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~l~e~Gl~~l 77 (577)
T 2z1q_A 4 EKKLWQKGGGWLLE-VPERVYTPED-FDESV----KEIARTTRTFVEREVLPLLERMEHGELELNVPLMRKAGELGLLAI 77 (577)
T ss_dssp -CCTTTSTTGGGTS-CCSCCCCGGG-CCHHH----HHHHHHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHHHHHTTTTST
T ss_pred ccccccccCccccC-CHHHcCCCCC-CCHHH----HHHHHHHHHHHhccCchhHHhhhcccCCCCHHHHHHHHHCCCCCc
Confidence 34568999999999 8999999998 89988 578899999999877664 112 224789999999999999999
Q ss_pred CCcccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCC
Q psy2177 124 QVPQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSD 203 (677)
Q Consensus 124 ~vP~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD 203 (677)
.+|++|||.|++..+++.++|++ +.|+++++++.+|.+++..+|..+||++||++|||++++|++++|+|+|||++|||
T Consensus 78 ~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD 156 (577)
T 2z1q_A 78 DVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSD 156 (577)
T ss_dssp TSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSS
T ss_pred CCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCC
Confidence 99999999999999999999999 78999999999998877778899999999999999999999999999999999999
Q ss_pred CCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCC
Q psy2177 204 AGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKA 283 (677)
Q Consensus 204 ~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg 283 (677)
+.+++|+|++++||++|+|||+|+||||++.||+++|+|+++ | .|+++|+||++.|||++++.|+++|+++
T Consensus 157 ~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~------g---~gis~flVp~~~pGv~v~~~~~~~G~~~ 227 (577)
T 2z1q_A 157 ALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVD------G---EHFTAFLVERDTPGLSFGPEEKKMGIKA 227 (577)
T ss_dssp GGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEET------T---TEEEEEEEETTCTTEEECCCCCBSSCTT
T ss_pred cccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeC------C---CeeEEEEEeCCCCCeEecCCCCCCCCCC
Confidence 999999999988888999999999999999999999999974 1 4799999999999999999999999999
Q ss_pred CCceEEEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHH
Q psy2177 284 SNTAEVYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLA 363 (677)
Q Consensus 284 ~~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La 363 (677)
+++++|.|+||+||.+++||.+|+|++.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|+
T Consensus 228 ~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La 307 (577)
T 2z1q_A 228 SSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLG 307 (577)
T ss_dssp SCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHH
T ss_pred CceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCC-------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhh
Q psy2177 364 RMALLHYVTESLAYMISGNMDNG-------------SQDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASAS 430 (677)
Q Consensus 364 ~m~~~~~aa~al~~~~a~~~d~~-------------~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~ 430 (677)
+|.+.+++++++++.++..+|.+ ..+...+++++|+++++.+++++++++|+|||+||+.
T Consensus 308 ~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~------- 380 (577)
T 2z1q_A 308 EMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQ------- 380 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecC-------
Confidence 99999999999999999888764 1245678999999999999999999999999999999
Q ss_pred HHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhccCCCcchhHHHH
Q psy2177 431 AAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKNDSLETVEPNTLEG 510 (677)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~~~~~~~~ia~~~ 510 (677)
+ +|++|+||| ++ +..|+||+|+|++++ |+...
T Consensus 381 ------e-------------------------~~l~r~~Rd-----a~-----~~~i~eGt~~i~~~~-------ia~~~ 412 (577)
T 2z1q_A 381 ------E-------------------------YPIERAYRD-----AR-----INRIFEGTNEINRLL-------IPGML 412 (577)
T ss_dssp ------T-------------------------SHHHHHHHH-----HG-----GGGTTTSCHHHHHHH-------TTGGG
T ss_pred ------C-------------------------ChHHHHHhh-----Cc-----ceeeeCcHHHHHHHH-------HHHHH
Confidence 8 999999999 99 999999999999999 66554
Q ss_pred HHHHhh-hHHHHHHHhcCCCCchhHHHHHHHHHHHHHhcCCCCCCCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy2177 511 IQYAGG-HLRELQKAFKNPTAHLGLIIGEVKKRGLKSIGLSTPPSLHHVVHANLAESGVLCSKSVVLFGEAVESLLLKYG 589 (677)
Q Consensus 511 l~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 589 (677)
++++++ ++... +.+++ ..+.+. + +. .+++++...+.++..+.+|...++.++.+||
T Consensus 413 l~~~~~~~l~~~-~~~~~-----------~~~~~~---~----~~----~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 469 (577)
T 2z1q_A 413 LRRALKGQLPLM-QAAQR-----------LQKELL---E----PS----FEEPEDLELHQVQNLKKLALMVAGLAVQKYG 469 (577)
T ss_dssp SCC--------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHhhcCCcHH-HHHHH-----------HHHHHc---C----CC----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 443332 12111 11111 111110 0 11 2667889999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH----HHHhhcC-------
Q psy2177 590 KGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQN----LGALNSG------- 658 (677)
Q Consensus 590 ~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~----~~~l~~~------- 658 (677)
+++.++|.++.|++|+.+++|+|.++++|++++ +|. ++.++++||.++..||+.+ +.++.+|
T Consensus 470 ~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (577)
T 2z1q_A 470 QGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL-----APVLARIYLAQALDRAQAGALSVLPRLVEGDEARVVY 542 (577)
T ss_dssp GGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT-----HHHHHHHHHHHHHHHHHHHHHHHGGGTCCTTTTHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHH
Confidence 999999999999999999999999999999988 343 8999999999999999999 7777777
Q ss_pred ---------CCCCcchHHHHHHHHhhc
Q psy2177 659 ---------KKLDSYTKLGDIAKNELK 676 (677)
Q Consensus 659 ---------~~~~~~~~~~~~~~~~~~ 676 (677)
.+.++|++..+||+.|++
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~ia~~~~~ 569 (577)
T 2z1q_A 543 SAARRLTKREPGDLVALRRQAAEAVLE 569 (577)
T ss_dssp HHHHHHTCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCChHHHHHHHHHHHHh
Confidence 567889999999999875
No 4
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=1.4e-65 Score=563.60 Aligned_cols=384 Identities=30% Similarity=0.510 Sum_probs=342.4
Q ss_pred cCcchhHhhccCCCCccccCCCCCCCChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCC
Q psy2177 48 ESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQV 125 (677)
Q Consensus 48 ~~~~f~~~lf~g~~~~~~~~~~p~~l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~v 125 (677)
.-.+|+.++|.|.... .|. +++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|++.||+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~--~~~----~~~e~----~~l~~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~ 79 (404)
T 2jif_A 10 GVDLGTENLYFQSMAP--LQT----FTDEE----MMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEV 79 (404)
T ss_dssp --------------CC--TTC----CCHHH----HHHHHHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSS
T ss_pred hhhhhhhHHhcccccc--cCC----CCHHH----HHHHHHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCC
Confidence 4467999999996543 122 67777 578999999999988773 35667889999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCC
Q psy2177 126 PQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAG 205 (677)
Q Consensus 126 P~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~ 205 (677)
|++|||.|++..+++.++|++++.|+++++.+.+|.+++...|..+|+++||++|||++.+|+ ++++|+|||++|||+.
T Consensus 80 P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~ 158 (404)
T 2jif_A 80 DPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSF 158 (404)
T ss_dssp CGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGG
T ss_pred chhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChh
Confidence 999999999999999999999999999998888887776778889999999999999999985 8999999999999999
Q ss_pred CCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCC
Q psy2177 206 SIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASN 285 (677)
Q Consensus 206 ~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~ 285 (677)
+++|+|+++ |++|+|||+|+||||++.||+++|+|+++. ++ +..++++|+||++.|||++.+.|+++|+++++
T Consensus 159 ~~~t~A~~~--g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~---~~--~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~ 231 (404)
T 2jif_A 159 ALKTRADKE--GDYYVLNGSKMWISSAEHAGLFLVMANVDP---TI--GYKGITSFLVDRDTPGLHIGKPENKLGLRASS 231 (404)
T ss_dssp GCCCEEEEE--TTEEEEEEEEEEEETTTTCSEEEEEEESCG---GG--GGGGEEEEEEETTCTTEEECCCCCBSSCTTSC
T ss_pred hceeEEEEe--CCEEEEEeEEEeecCCcccCEEEEEEEeCC---CC--CCCceEEEEEecCCCCeEeccCcccccCCCCc
Confidence 999999984 556999999999999999999999999852 11 23579999999999999999999999999999
Q ss_pred ceEEEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHH
Q psy2177 286 TAEVYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARM 365 (677)
Q Consensus 286 t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m 365 (677)
+++|.||||+||.+++||.+++|++.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|
T Consensus 232 ~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~ 311 (404)
T 2jif_A 232 TCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHV 311 (404)
T ss_dssp EEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHH
T ss_pred eEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhh
Q psy2177 366 ALLHYVTESLAYMISGNMDNGSQDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKES 445 (677)
Q Consensus 366 ~~~~~aa~al~~~~a~~~d~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (677)
.+++++++++++.++..+|.+. +...+++++|+++++.+.++++.++|++||.||+. +
T Consensus 312 ~~~~~aar~~~~~aa~~~~~g~-~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~-------------~-------- 369 (404)
T 2jif_A 312 ATQLEAARLLTYNAARLLEAGK-PFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTK-------------D-------- 369 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T--------
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-ccHHHHHHHHHHHHHHHHHHHHHHHHhcCcceecC-------------C--------
Confidence 9999999999999999998875 34678999999999999999999999999999999 8
Q ss_pred hHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 446 QSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
+|++|+||| ++ +..|++|+++|++..
T Consensus 370 -----------------~~~~r~~Rd-----a~-----~~~i~~Gt~ei~~~~ 395 (404)
T 2jif_A 370 -----------------YPVEKYFRD-----AK-----IGTIYEGASNIQLNT 395 (404)
T ss_dssp -----------------SSHHHHHHH-----HG-----GGGTTTSCHHHHHHH
T ss_pred -----------------CcHHHHHhh-----cc-----ceeecCCHHHHHHHH
Confidence 999999999 99 999999999999999
No 5
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=8.5e-65 Score=553.54 Aligned_cols=370 Identities=33% Similarity=0.493 Sum_probs=342.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|.+.||+++.+|++|||.|+++.+++.++|++++.|
T Consensus 7 ~~~~~----~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 82 (387)
T 2d29_A 7 EGAEE----RQVLGPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYD 82 (387)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhC
Confidence 57777 578899999998877663 456678899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|..++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++ |++|+|||+|+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~~s 160 (387)
T 2d29_A 83 GALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKV--EGGWRLNGTKQFIT 160 (387)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEe--CCEEEEEeEEeccC
Confidence 9998888887666678889999999999999999999999999999999999999999999994 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++.. +..+.+..++++|+||++.|||++.++|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 161 ~~~~Ad~~~v~a~~~~~-~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~ 239 (387)
T 2d29_A 161 QGSVAGVYVVMARTDPP-PSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFY 239 (387)
T ss_dssp TTTTCSEEEEEEECSCC-SCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHH
T ss_pred CCCcCCEEEEEEEeCCc-cccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHH
Confidence 99999999999998521 10001235799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.+++.+|.+. +.
T Consensus 240 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~-~~ 318 (387)
T 2d29_A 240 DVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGR-PF 318 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999764 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|+++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 319 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 360 (387)
T 2d29_A 319 TLEAAQAKLFASEAAVKACDEAIQILGGYGYVK-------------D-------------------------YPVERYWR 360 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST-------------T-------------------------SSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC-------------C-------------------------ChHHHHHH
Confidence 688999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 361 d-----a~-----~~~i~~G~~~i~~~~ 378 (387)
T 2d29_A 361 D-----AR-----LTRIGEGTSEILKLV 378 (387)
T ss_dssp H-----HG-----GGGTTTSCHHHHHHH
T ss_pred H-----hh-----CccccCCHHHHHHHH
Confidence 9 99 999999999999998
No 6
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=9.9e-65 Score=550.20 Aligned_cols=361 Identities=34% Similarity=0.530 Sum_probs=339.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.| .+.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.+.|++++.|
T Consensus 3 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 78 (372)
T 2dvl_A 3 LTQEQ----RLVLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAAAD 78 (372)
T ss_dssp CCHHH----HHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcC
Confidence 57777 57889999999876655 3456778999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|.+++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~~s 156 (372)
T 2dvl_A 79 PSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRV--KGGFVLNGVKSWIT 156 (372)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred cHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEE--CCEEEEEeEEEeec
Confidence 9998888887656677888999999999999999999999999999999999999999999984 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|+..||+++|+|+++ .++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 157 ~~~~Ad~~~v~a~~~----------~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~ 226 (372)
T 2dvl_A 157 SAGHAHLYVVMARTE----------KGISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLA 226 (372)
T ss_dssp TTTTCSEEEEEEEET----------TEEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHH
T ss_pred CCCcCCEEEEEEEeC----------CCcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHH
Confidence 999999999999974 1689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +.
T Consensus 227 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~-~~ 305 (372)
T 2dvl_A 227 YALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGE-RF 305 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-ch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998774 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|.++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 306 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 347 (372)
T 2dvl_A 306 TLEASAAKLFASAAAVEVTREAVQVLGGYGYHR-------------D-------------------------YRVERYYR 347 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSG-------------G-------------------------GSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCC-------------C-------------------------CcHHHHHH
Confidence 788999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 348 d-----a~-----~~~i~~Gt~~i~~~~ 365 (372)
T 2dvl_A 348 D-----AK-----VTEIYEGTSEIQRLV 365 (372)
T ss_dssp H-----HH-----GGGTTTSCHHHHHHH
T ss_pred H-----hh-----cceecCCHHHHHHHH
Confidence 9 99 999999999999998
No 7
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-64 Score=550.68 Aligned_cols=365 Identities=37% Similarity=0.530 Sum_probs=340.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.| .+.|+.+.+|+++|+.|.+.||+++.+|++|||.|+++.+++.++|++++.|
T Consensus 5 ~~~~~----~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~ 80 (379)
T 1ukw_A 5 LTEEQ----RQLQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYAC 80 (379)
T ss_dssp CCHHH----HHHHHHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 57777 57889999999887766 3456678899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..| .++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+|||
T Consensus 81 ~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~~s 157 (379)
T 1ukw_A 81 MGIYTIPMAS-DLGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQ--GDHYVLNGTKMWIS 157 (379)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred chHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEe--CCEEEEEEEEeccc
Confidence 9998888777 45667888999999999999999999999999999999999999999999984 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++. +. +.+++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 158 ~~~~Ad~~~v~a~~~~---~~--~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~ 232 (379)
T 1ukw_A 158 NGGEAEWVVVFATVNP---EL--RHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFK 232 (379)
T ss_dssp TTTTEEEEEEEEESCG---GG--GGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHH
T ss_pred CCCcCCEEEEEEEcCC---CC--CCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHH
Confidence 9999999999999852 11 235799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
..+..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +.
T Consensus 233 ~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~-~~ 311 (379)
T 1ukw_A 233 IAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGL-PH 311 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-ch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998764 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|.++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 312 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 353 (379)
T 1ukw_A 312 AHASAIAKAYASEIAFEAANQAIQIHGGYGYVR-------------E-------------------------FPVEKLLR 353 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST-------------T-------------------------SSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCeecCC-------------C-------------------------ChHHHHHH
Confidence 688999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 354 d-----a~-----~~~i~~Gt~~i~~~~ 371 (379)
T 1ukw_A 354 D-----VK-----LNQIYEGTNEIQRLI 371 (379)
T ss_dssp H-----HH-----GGGTTTSCHHHHHHH
T ss_pred H-----hc-----CceecCCHHHHHHHH
Confidence 9 99 999999999999998
No 8
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=3.5e-65 Score=557.89 Aligned_cols=366 Identities=31% Similarity=0.528 Sum_probs=337.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.++|++++.|
T Consensus 19 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~ 94 (393)
T 3pfd_A 19 LPEEH----IALREAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVD 94 (393)
T ss_dssp ---CH----HHHHHHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTC
T ss_pred CCHHH----HHHHHHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhC
Confidence 57777 678999999999887763 467788999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|. ++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+|+|
T Consensus 95 ~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~lnG~K~~~s 171 (393)
T 3pfd_A 95 CSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVAD--GDDWILNGSKCWIT 171 (393)
T ss_dssp HHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred chHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEc--CCEEEEeeEEEEec
Confidence 99988776653 4556788999999999999999999999999999999999999999999995 45599999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++.. . +..++++|+||++.|||++.++|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 172 ~~~~Ad~~~v~a~~~~~---~--~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~ 246 (393)
T 3pfd_A 172 NGGKSTWYTVMAVTDPD---K--GANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFK 246 (393)
T ss_dssp TTTTCSEEEEEEESCGG---G--GGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHH
T ss_pred CCcccCEEEEEEEeCCC---C--CCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHH
Confidence 99999999999998531 1 236899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+..+.
T Consensus 247 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~ 326 (393)
T 3pfd_A 247 TALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDL 326 (393)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876546
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|+++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 327 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 368 (393)
T 3pfd_A 327 GFISAASKCFASDVAMEVTTDAVQLFGGYGYTQ-------------D-------------------------FPVERMMR 368 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBT-------------T-------------------------SSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchhhccC-------------C-------------------------ChHHHHHH
Confidence 788999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++||++|++..
T Consensus 369 d-----a~-----~~~i~~Gt~ei~~~~ 386 (393)
T 3pfd_A 369 D-----AK-----ITQIYEGTNQIQRVV 386 (393)
T ss_dssp H-----HH-----HHTTSSSCHHHHHHH
T ss_pred h-----hc-----ceeeecCHHHHHHHH
Confidence 9 99 999999999999998
No 9
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.5e-64 Score=551.42 Aligned_cols=365 Identities=29% Similarity=0.435 Sum_probs=341.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++.+.+++|+++.+.| .+.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.++|+++++|
T Consensus 19 ~~~e~----~~~~~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~ 94 (393)
T 1rx0_A 19 LNEEQ----KEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGC 94 (393)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTC
T ss_pred CCHHH----HHHHHHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 67887 57889999999988765 3456778899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|. ++...|..+|+++||++|||++++|+.++|+++|||++|||+.+++|+|+++ |++|+|||+|+|||
T Consensus 95 ~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~lnG~K~~is 171 (393)
T 1rx0_A 95 TSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQ--GDHYILNGSKAFIS 171 (393)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred cchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEc--CCEEEEEeEEEeec
Confidence 99888887775 4557788899999999999999999999999999999999999999999984 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++. ++ .+++++|+||++.|||++.+.++++|++++++++|.||||+||.+++||.+++|++
T Consensus 172 ~a~~Ad~~~v~a~~~~----~~--~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~ 245 (393)
T 1rx0_A 172 GAGESDIYVVMCRTGG----PG--PKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFL 245 (393)
T ss_dssp TTTTCSEEEEEEESSS----SS--GGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHH
T ss_pred CCccCCEEEEEEEcCC----CC--CCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHH
Confidence 9999999999999842 12 25799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+..+.
T Consensus 246 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~ 325 (393)
T 1rx0_A 246 IAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDA 325 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999876566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|+++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 326 ~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~-------------~-------------------------~~l~r~~R 367 (393)
T 1rx0_A 326 VALCSMAKLFATDECFAICNQALQMHGGYGYLK-------------D-------------------------YAVQQYVR 367 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBT-------------T-------------------------STHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecC-------------C-------------------------ChHHHHHH
Confidence 788999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|+++.
T Consensus 368 d-----a~-----~~~i~~Gt~~i~~~~ 385 (393)
T 1rx0_A 368 D-----SR-----VHQILEGSNEVMRIL 385 (393)
T ss_dssp H-----HH-----HTTTSSSCHHHHHHH
T ss_pred h-----cc-----CceecCChHHHHHHH
Confidence 9 99 999999999999999
No 10
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=3.1e-64 Score=550.02 Aligned_cols=366 Identities=33% Similarity=0.519 Sum_probs=341.8
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|++.||+++.+|++|||.|++..+++.+.|++++.|
T Consensus 6 ~~~~~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 81 (391)
T 2vig_A 6 LPETH----QMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGC 81 (391)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhc
Confidence 57777 578899999998877663 456778999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|..++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~~s 159 (391)
T 2vig_A 82 ASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAE--GDSWVLNGTKAWIT 159 (391)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEe--CCEEEEeeEEEeec
Confidence 9999888888655677888999999999999999999999999999999999999999999984 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++. +++ ..++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 160 ~~~~Ad~~~v~a~~~~---~~~--~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~ 234 (391)
T 2vig_A 160 NAWEASAAVVFASTDR---ALQ--NKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFK 234 (391)
T ss_dssp TTTTCSEEEEEEECCS---SST--TSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHH
T ss_pred CCCcCCEEEEEEEeCC---CCC--CCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHH
Confidence 9999999999999852 112 25799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+..++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.+++.+|.+.. .
T Consensus 235 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~-~ 313 (391)
T 2vig_A 235 IAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKP-F 313 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998653 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|+++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 314 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 355 (391)
T 2vig_A 314 IKEAAMAKLAASEAATAISHQAIQILGGMGYVT-------------E-------------------------MPAERHYR 355 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T-------------------------SSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCeEecC-------------C-------------------------ChHHHHHH
Confidence 678999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|++++++..
T Consensus 356 d-----a~-----~~~i~~G~~~~~~~~ 373 (391)
T 2vig_A 356 D-----AR-----ITEIYEGTSEIQRLV 373 (391)
T ss_dssp H-----HH-----HHTTTTSCHHHHHHH
T ss_pred H-----hh-----cceeecCHHHHHHHH
Confidence 9 99 999999999999998
No 11
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=9.2e-65 Score=556.56 Aligned_cols=365 Identities=24% Similarity=0.347 Sum_probs=342.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhcc-
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGN- 149 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~- 149 (677)
+++|| +++++.+++|+++.+.|. +.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.++|++++.
T Consensus 29 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~ 104 (403)
T 3r7k_A 29 TTPER----RALSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAG 104 (403)
T ss_dssp GCHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTT
T ss_pred CCHHH----HHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcC
Confidence 68887 678999999999888774 45677899999999999999999999999999999999999999999998
Q ss_pred CchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEee
Q psy2177 150 DLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWI 229 (677)
Q Consensus 150 d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~i 229 (677)
|+++++.+.+|..++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|++ +|++|+|||+|+||
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~--~~~g~~lnG~K~~v 182 (403)
T 3r7k_A 105 GSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVR--EGDTYVVNGAKTFI 182 (403)
T ss_dssp CCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEE--CSSEEEEEEEEEEE
T ss_pred CchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEE--ECCEEEEEEEEEcc
Confidence 8888877776666667888999999999999999999999999999999999999999999999 45569999999999
Q ss_pred cCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchH
Q psy2177 230 SNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGF 309 (677)
Q Consensus 230 sna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~ 309 (677)
||+..||+++|+|+++. + + ..++++|+||++.|||++.++|+++|++++++++|.||||+||.+++||.+++|+
T Consensus 183 s~a~~Ad~~~v~a~~~~---~-~--~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~ 256 (403)
T 3r7k_A 183 TSGVRADFVTTAVRTGG---P-G--YGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGF 256 (403)
T ss_dssp ETTTTCSEEEEEEECSS---S-S--GGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred cCCccCCEEEEEEEcCC---C-C--CCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchH
Confidence 99999999999999853 1 2 3589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc
Q psy2177 310 KVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQD 389 (677)
Q Consensus 310 ~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~ 389 (677)
..++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+..
T Consensus 257 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~- 335 (403)
T 3r7k_A 257 LQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGED- 335 (403)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhh
Q psy2177 390 YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVL 469 (677)
Q Consensus 390 ~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~ 469 (677)
...+++++|+++++.+.++++.++|++||.||+. + +|++|+|
T Consensus 336 ~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~-------------~-------------------------~~~~r~~ 377 (403)
T 3r7k_A 336 VVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMR-------------E-------------------------SEIERHY 377 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T-------------------------SHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecC-------------C-------------------------chHHHHH
Confidence 4678999999999999999999999999999999 8 9999999
Q ss_pred hhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 470 TEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 470 RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
|| ++ +..|++|+++|++..
T Consensus 378 Rd-----a~-----~~~i~~Gt~ei~~~~ 396 (403)
T 3r7k_A 378 RD-----CR-----ILGIGGGTNEIMNEV 396 (403)
T ss_dssp HH-----HT-----TTTTTTSCHHHHHHH
T ss_pred HH-----hC-----cceeecCHHHHHHHH
Confidence 99 99 999999999999998
No 12
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.4e-64 Score=548.42 Aligned_cols=366 Identities=29% Similarity=0.408 Sum_probs=339.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|.+.||+++.+|++|||.|+++.+++.+.|++++.|
T Consensus 10 ~~~~~----~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~ 85 (385)
T 2pg0_A 10 LREEH----HMFRAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVG 85 (385)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhC
Confidence 68887 578899999998887773 456778999999999999999999999999999999999999999999999
Q ss_pred -chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEee
Q psy2177 151 -LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWI 229 (677)
Q Consensus 151 -~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~i 229 (677)
+++++.+ |..++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+||
T Consensus 86 ~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~~ 161 (385)
T 2pg0_A 86 SSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKD--GDYYIVNGQKTFI 161 (385)
T ss_dssp GGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEE
T ss_pred CchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEc--CCEEEEEeEEecc
Confidence 8887755 6666677888999999999999999999999999999999999999999999985 4569999999999
Q ss_pred cCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchH
Q psy2177 230 SNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGF 309 (677)
Q Consensus 230 sna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~ 309 (677)
||++.||+++|+|+++. +.+.+..++++|+||++.|||++.++|+++|++++++++|.||||+||.+++||.+++|+
T Consensus 162 s~~~~Ad~~~v~a~~~~---~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~ 238 (385)
T 2pg0_A 162 TNGIHADLIVVACKTDP---QAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGF 238 (385)
T ss_dssp TTTTTCSEEEEEEESCT---TCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHH
T ss_pred cCCcccCEEEEEEEeCC---ccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchH
Confidence 99999999999999852 100123579999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc
Q psy2177 310 KVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQD 389 (677)
Q Consensus 310 ~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~ 389 (677)
..++..++.+|+..++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +
T Consensus 239 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~-~ 317 (385)
T 2pg0_A 239 YYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGK-Q 317 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhh
Q psy2177 390 YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVL 469 (677)
Q Consensus 390 ~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~ 469 (677)
...+++++|.++++.+.++++.++|++||.||+. + +|++|+|
T Consensus 318 ~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~ 359 (385)
T 2pg0_A 318 IVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYME-------------E-------------------------YEIARRY 359 (385)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBT-------------T-------------------------SHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-------------C-------------------------CcHHHHH
Confidence 5788999999999999999999999999999999 8 9999999
Q ss_pred hhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 470 TEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 470 RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
|| ++ +..|++|+++|++..
T Consensus 360 Rd-----a~-----~~~i~~Gt~~i~~~~ 378 (385)
T 2pg0_A 360 RD-----IP-----VSAIYAGTNEMMKTI 378 (385)
T ss_dssp HH-----GG-----GGGTTTSCHHHHHHH
T ss_pred hh-----hc-----CceeecCHHHHHHHH
Confidence 99 99 999999999999998
No 13
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.7e-64 Score=550.24 Aligned_cols=367 Identities=36% Similarity=0.515 Sum_probs=342.8
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCC---CCHHHHHHHHHHHh
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLG---LTNTQYARMVEIVG 147 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~G---ls~~~~~~v~e~la 147 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|++.||+++.+|++|||.| ++..+++.++|+++
T Consensus 5 ~~~~~----~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~ 80 (383)
T 1buc_A 5 LTDIQ----QDFLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELA 80 (383)
T ss_dssp CCHHH----HHHHHHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHH
Confidence 57777 578899999998877763 4567789999999999999999999999999999 99999999999999
Q ss_pred ccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEE
Q psy2177 148 GNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKI 227 (677)
Q Consensus 148 ~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~ 227 (677)
+.|+++++.+.+|.+++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|++++ |++|+|||+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~-~~g~~lnG~K~ 159 (383)
T 1buc_A 81 KYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKND-DGTYTLNGSKI 159 (383)
T ss_dssp HHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEEEEEE
T ss_pred hhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcC-CCEEEEEEEEe
Confidence 99999998888887667788899999999999999999999999999999999999999999999852 55699999999
Q ss_pred eecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcc
Q psy2177 228 WISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGN 307 (677)
Q Consensus 228 ~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~ 307 (677)
||||++.||+++|+|+++. +.+ .+++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++
T Consensus 160 ~~s~~~~Ad~~~v~a~~~~---~~~--~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~ 234 (383)
T 1buc_A 160 FITNGGAADIYIVFAMTDK---SKG--NHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGK 234 (383)
T ss_dssp EEETTTTCSEEEEEEESCS---SSS--TTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTB
T ss_pred ccCCCCcCCEEEEEEEeCC---CCC--CCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCc
Confidence 9999999999999999852 112 35799999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q psy2177 308 GFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGS 387 (677)
Q Consensus 308 G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~ 387 (677)
|++.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+.
T Consensus 235 g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~ 314 (383)
T 1buc_A 235 GFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGK 314 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhh
Q psy2177 388 QDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPE 467 (677)
Q Consensus 388 ~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler 467 (677)
+...+++++|.++++.+.++++.++|++||.||+. + +|++|
T Consensus 315 -~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r 355 (383)
T 1buc_A 315 -PFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSE-------------E-------------------------YPVAR 355 (383)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST-------------T-------------------------SSHHH
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC-------------C-------------------------ChHHH
Confidence 45788999999999999999999999999999999 8 99999
Q ss_pred hhhhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 468 VLTEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 468 ~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
+||| ++ +..|++|+++|++..
T Consensus 356 ~~Rd-----a~-----~~~i~~Gt~~i~~~~ 376 (383)
T 1buc_A 356 HMRD-----AK-----ITQIYEGTNEVQLMV 376 (383)
T ss_dssp HHHH-----HG-----GGGTTTSCHHHHHHH
T ss_pred HHHH-----hh-----cccccCCHHHHHHHH
Confidence 9999 99 999999999999998
No 14
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=4.2e-64 Score=549.89 Aligned_cols=368 Identities=32% Similarity=0.472 Sum_probs=340.2
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.| .+.|+.+.+|+++|+.|++.||+++.+|++|||.|+++.+++.++|++++.|
T Consensus 16 ~~~~~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 91 (396)
T 1egd_A 16 FTEQQ----KEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAYGC 91 (396)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhC
Confidence 57777 57889999999887765 3456678899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+ .|..++...|..+|+++||++|||++++|++++|+++|||++|||+..++|+|++ +|++|+|||+|+|||
T Consensus 92 ~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~--~~~g~~lnG~K~~~s 168 (396)
T 1egd_A 92 TGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEK--KGDEYIINGQKMWIT 168 (396)
T ss_dssp HHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEE--CSSEEEEEEEEEEEE
T ss_pred ccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEE--eCCEEEEEEEEEccc
Confidence 9988876 6766666678899999999999999999999999999999999999999999998 556699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++..+ ...+..++++|+||++.|||++.++|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 169 ~~~~Ad~~~v~a~~~~~~--~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~ 246 (396)
T 1egd_A 169 NGGKANWYFLLARSDPDP--KAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFK 246 (396)
T ss_dssp TTTTCSEEEEEEECCCCT--TSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHH
T ss_pred CCcccCEEEEEEEeCCCC--CCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHH
Confidence 999999999999985321 111124799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +.
T Consensus 247 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~-~~ 325 (396)
T 1egd_A 247 VAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGR-RN 325 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999764 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|.++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 326 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~l~r~~R 367 (396)
T 1egd_A 326 TYYASIAKAFAGDIANQLATDAVQILGGNGFNT-------------E-------------------------YPVEKLMR 367 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTBT-------------T-------------------------SSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCcccccC-------------C-------------------------ChHHHHHH
Confidence 678999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 368 d-----a~-----~~~i~~Gt~~i~~~~ 385 (396)
T 1egd_A 368 D-----AK-----IYQIYGGTSQIQRLI 385 (396)
T ss_dssp H-----HG-----GGGTTTSCHHHHHHH
T ss_pred H-----hh-----CeeecCCHHHHHHHH
Confidence 9 99 999999999999999
No 15
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.9e-64 Score=549.84 Aligned_cols=368 Identities=30% Similarity=0.478 Sum_probs=342.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCH--HHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhc
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEP--NTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGG 148 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~--e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~ 148 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+ ++|+.|.+.||+++.+|++|||.|+++.+++.++|++++
T Consensus 13 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~ 88 (394)
T 1ivh_A 13 LSEEQ----RQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISR 88 (394)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHh
Confidence 67777 578899999998887773 4566788999 999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEe
Q psy2177 149 NDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIW 228 (677)
Q Consensus 149 ~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~ 228 (677)
.|+++++.+.+|..++...|..+|+++||++|||++++|++++|+++|||++|||+..++|+|++ +|++|+|||+|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~--~~~g~~lnG~K~~ 166 (394)
T 1ivh_A 89 ASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEK--KGNHYILNGNKFW 166 (394)
T ss_dssp HCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEE--CSSEEEEEEEEEE
T ss_pred hchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEE--cCCEEEEEeEEEe
Confidence 99999988888875667888999999999999999999999999999999999999999999998 4556999999999
Q ss_pred ecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcch
Q psy2177 229 ISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNG 308 (677)
Q Consensus 229 isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G 308 (677)
|||++.||+++|+|+++.. ...+..++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++|
T Consensus 167 vs~~~~Ad~~~v~ar~~~~---~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g 243 (394)
T 1ivh_A 167 ITNGPDADVLIVYAKTDLA---AVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKG 243 (394)
T ss_dssp EETGGGCSEEEEEEESCTT---CSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCH
T ss_pred eCCCCcCCEEEEEEEeCCc---ccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCch
Confidence 9999999999999998521 1112358999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q psy2177 309 FKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQ 388 (677)
Q Consensus 309 ~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~ 388 (677)
++.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+.+++++++++.++..+|.+.
T Consensus 244 ~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~- 322 (394)
T 1ivh_A 244 VYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGH- 322 (394)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhh
Q psy2177 389 DYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEV 468 (677)
Q Consensus 389 ~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~ 468 (677)
+...+++++|.++++.+.++++.++|++||.||+. + +|++|+
T Consensus 323 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~l~r~ 364 (394)
T 1ivh_A 323 CTAKDCAGVILYSAECATQVALDGIQCFGGNGYIN-------------D-------------------------FPMGRF 364 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T-------------------------STHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-------------C-------------------------chHHHH
Confidence 34678999999999999999999999999999999 8 999999
Q ss_pred hhhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 469 LTEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 469 ~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
||| ++ +..|++|+++|++..
T Consensus 365 ~Rd-----a~-----~~~i~~Gt~~i~~~~ 384 (394)
T 1ivh_A 365 LRD-----AK-----LYEIGAGTSEVRRLV 384 (394)
T ss_dssp HHH-----HH-----HTTTTTSCHHHHHHH
T ss_pred HHh-----cc-----cccccCChHHHHHHH
Confidence 999 99 999999999999998
No 16
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=2.2e-64 Score=553.50 Aligned_cols=366 Identities=24% Similarity=0.337 Sum_probs=343.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.++|++++.|
T Consensus 26 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~ 101 (403)
T 3p4t_A 26 TTAER----EALRKTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAG 101 (403)
T ss_dssp SSHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTT
T ss_pred CCHHH----HHHHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 57777 679999999999988763 456778999999999999999999999999999999999999999999999
Q ss_pred chh-HHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEee
Q psy2177 151 LAV-GIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWI 229 (677)
Q Consensus 151 ~s~-~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~i 229 (677)
+++ ++.+..|..++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+||
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~v 179 (403)
T 3p4t_A 102 SPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLD--GDHYVINGAKTYI 179 (403)
T ss_dssp CCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEE
T ss_pred CchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEe--CCEEEEEEEEEEe
Confidence 998 7777777766677888999999999999999999999999999999999999999999995 4569999999999
Q ss_pred cCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchH
Q psy2177 230 SNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGF 309 (677)
Q Consensus 230 sna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~ 309 (677)
||+..||+++|+|+++. + + ..++++|+||++.|||++.++|+++|++++++++|.||||+||.+++||.+++|+
T Consensus 180 s~a~~Ad~~~v~a~~~~---~-~--~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~ 253 (403)
T 3p4t_A 180 TSGVRADYVVTAARTGG---P-G--AGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGF 253 (403)
T ss_dssp ETTTTCSEEEEEEECSS---S-S--GGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred cCCcccCEEEEEEEeCC---C-C--CCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchH
Confidence 99999999999999853 1 2 3589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc
Q psy2177 310 KVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQD 389 (677)
Q Consensus 310 ~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~ 389 (677)
..++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+.+++++++++.++..+|.+..+
T Consensus 254 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~ 333 (403)
T 3p4t_A 254 AQIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETN 333 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhh
Q psy2177 390 YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVL 469 (677)
Q Consensus 390 ~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~ 469 (677)
...+++++|+++++.+.++++.++|++||.||+. + +|++|+|
T Consensus 334 ~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~ 375 (403)
T 3p4t_A 334 LIAEVCFAKNTAVEAGEWVANQAVQLFGGMGYMA-------------E-------------------------SEVERQY 375 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T-------------------------SHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhChhhccC-------------C-------------------------CcHHHHH
Confidence 3788999999999999999999999999999999 8 9999999
Q ss_pred hhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 470 TEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 470 RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
|| ++ +..|++|+++|++..
T Consensus 376 Rd-----a~-----~~~i~~Gt~ei~~~~ 394 (403)
T 3p4t_A 376 RD-----MR-----ILGIGGGTTEILTSL 394 (403)
T ss_dssp HH-----HT-----TTTTTTSCHHHHHHH
T ss_pred HH-----hh-----cceeccCHHHHHHHH
Confidence 99 99 999999999999998
No 17
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=3.9e-64 Score=548.02 Aligned_cols=363 Identities=29% Similarity=0.520 Sum_probs=334.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|++.||+++.+|++|||.|++..+++.++|++++.|
T Consensus 16 ~~~~~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~ 91 (387)
T 3nf4_A 16 PSQEA----AELIELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARW 91 (387)
T ss_dssp SSHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTC
T ss_pred CCHHH----HHHHHHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhC
Confidence 57777 678999999999888774 456778999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|. ++...|..+|+++||++|||++++|+.++|+++|||++|||+..++|+|+++ |++|+|||+|+|+|
T Consensus 92 ~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~lnG~K~~~s 168 (387)
T 3nf4_A 92 ASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPT--DGGYVINGSKSWIT 168 (387)
T ss_dssp HHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred chHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEe--CCEEEEEeEEeccc
Confidence 99998888775 4557788999999999999999999999999999999999999999999985 45699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++. + .+++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++|+.
T Consensus 169 ~~~~Ad~~~v~a~~~~-----~--~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~ 241 (387)
T 3nf4_A 169 HGGKADFYTLFARTGE-----G--SRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQ 241 (387)
T ss_dssp TTTTCSEEEEEEECC---------CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHH
T ss_pred CCcccCEEEEEEEeCC-----C--CCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHH
Confidence 9999999999999851 1 25799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
..+..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+.+++++++++.++..+|.+. +.
T Consensus 242 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~-~~ 320 (387)
T 3nf4_A 242 IAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGR-PY 320 (387)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999874 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|+++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 321 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~-------------~-------------------------~~~~r~~R 362 (387)
T 3nf4_A 321 SQQASIAKLTATDAAMKVTTDAVQVFGGVGYTR-------------D-------------------------YRVERYMR 362 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T-------------------------SSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcC-------------C-------------------------CcHHHHHh
Confidence 788999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|+++.
T Consensus 363 d-----a~-----~~~i~~Gt~ei~~~~ 380 (387)
T 3nf4_A 363 E-----AK-----IMQIFEGTNQIQRLV 380 (387)
T ss_dssp H-----HH-----HHTTSSSCHHHHHHH
T ss_pred H-----hh-----cCeeecChHHHHHHH
Confidence 9 99 999999999999998
No 18
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=2.5e-64 Score=551.74 Aligned_cols=364 Identities=28% Similarity=0.408 Sum_probs=334.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|| +++++.+++|+++.+.| .+.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.++|++++.|
T Consensus 19 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~ 94 (396)
T 3ii9_A 19 LADDE----RMVRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVD 94 (396)
T ss_dssp SCHHH----HHHHHHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTC
T ss_pred CCHHH----HHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhC
Confidence 68887 67899999999877755 3456778999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+.+|..++...|..+|+++||++|||++++|++++|+++|||++|||+..++|+|+++ |++|+|||+|.|||
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~vs 172 (396)
T 3ii9_A 95 SGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKV--PGGYSLSGSKMWIT 172 (396)
T ss_dssp HHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred hhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEe--CCEEEEEEEEEeEC
Confidence 9998888888766667789999999999999999999999999999999999999999999994 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++. +|. .++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||. ++|++
T Consensus 173 ~a~~Ad~~~v~a~~~~----~g~--~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~ 245 (396)
T 3ii9_A 173 NSPIADVFVVWAKLDE----DGR--DEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLR 245 (396)
T ss_dssp TGGGCSEEEEEEEEEE----TTE--EEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTH
T ss_pred CCccCCEEEEEEEecC----CCC--CceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-ChHHH
Confidence 9999999999999851 122 4799999999999999999999999999999999999999999999987 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
..+..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+.+++++++++.++..+|.+. +.
T Consensus 246 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~-~~ 324 (396)
T 3ii9_A 246 GPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGT-AA 324 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999874 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|.++++.+.++++.++|++||+||+. + +|++|+||
T Consensus 325 ~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 366 (396)
T 3ii9_A 325 VEITSIMKRNSCGKALDIARLARDMLGGNGISD-------------E-------------------------FGVARHLV 366 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCSCSG-------------G-------------------------GHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCcccccC-------------C-------------------------CcHHHHHh
Confidence 778999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 367 d-----a~-----~~~i~~Gt~~~~~~~ 384 (396)
T 3ii9_A 367 N-----LE-----VVNTYEGTHDIHALI 384 (396)
T ss_dssp H-----HH-----HHHHHHCSSCHHHHH
T ss_pred h-----hc-----CceeecCHHHHHHHH
Confidence 9 99 999999999999998
No 19
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-63 Score=545.71 Aligned_cols=359 Identities=26% Similarity=0.399 Sum_probs=339.8
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCC-HHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhcc
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVE-PNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGN 149 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p-~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~ 149 (677)
+++|+ +++++.+++|+++.+.|. +.|+++.+| +++|+.|++.||+++.+ ++|||.|++..+++.++|++++.
T Consensus 30 l~~e~----~~l~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~~ 104 (403)
T 3sf6_A 30 LSAEE----REIRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGLACLELEAG 104 (403)
T ss_dssp SCHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHHHHHHHHh
Confidence 57787 678999999999988773 456778899 99999999999999999 99999999999999999999999
Q ss_pred CchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEee
Q psy2177 150 DLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWI 229 (677)
Q Consensus 150 d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~i 229 (677)
|+++++.+.+|.+++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+||
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~i 182 (403)
T 3sf6_A 105 DSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRS--GDDWILTGTKMWI 182 (403)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEE
T ss_pred cccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEE--CCEEEEEEEEEee
Confidence 99999888888777778899999999999999999999999999999999999999999999995 4569999999999
Q ss_pred cCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchH
Q psy2177 230 SNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGF 309 (677)
Q Consensus 230 sna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~ 309 (677)
||++.||+++|+|+++ +|+++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||. ++|+
T Consensus 183 s~a~~Ad~~~v~ar~~----------~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~ 251 (403)
T 3sf6_A 183 TNGSVADVAVVWARTD----------EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSL 251 (403)
T ss_dssp ETGGGCSEEEEEEEET----------TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCST
T ss_pred cCCcccCEEEEEEEeC----------CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhH
Confidence 9999999999999974 3689999999999999999999999999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc
Q psy2177 310 KVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQD 389 (677)
Q Consensus 310 ~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~ 389 (677)
...+..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+..
T Consensus 252 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~- 330 (403)
T 3sf6_A 252 GAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGEL- 330 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988754
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhh
Q psy2177 390 YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVL 469 (677)
Q Consensus 390 ~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~ 469 (677)
...+++++|+++++.+.++++.++|++||.||+. + +|++|+|
T Consensus 331 ~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~ 372 (403)
T 3sf6_A 331 APEQVSLGKLNNVREAIEIARTARTVLGASGITG-------------E-------------------------YPVMRHA 372 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST-------------T-------------------------SSHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhcCCeEccc-------------c-------------------------CcHHHHH
Confidence 4788999999999999999999999999999999 8 9999999
Q ss_pred hhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 470 TEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 470 RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
|| ++ +..|++|+++|++..
T Consensus 373 Rd-----a~-----~~~i~~Gt~~i~~~~ 391 (403)
T 3sf6_A 373 NN-----LE-----SVLTYEGTSEMHTLI 391 (403)
T ss_dssp HH-----HH-----HHHHSSSCHHHHHHH
T ss_pred hh-----cc-----cceeecCHHHHHHHH
Confidence 99 99 999999999999998
No 20
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=8.1e-64 Score=548.14 Aligned_cols=359 Identities=25% Similarity=0.398 Sum_probs=338.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.| .+.|+.+.+|+++|+.|++.||+++.+ ++|||.|+++.+++.++|++++.|
T Consensus 26 l~~e~----~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~~~ 100 (399)
T 3swo_A 26 LDQDE----RDIAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLACMELEAGD 100 (399)
T ss_dssp SCHHH----HHHHHHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHHHhC
Confidence 67887 67889999999987765 345667889999999999999999999 999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+.+|.+++...|..+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+|+|
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~vs 178 (399)
T 3swo_A 101 SGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRD--GSDWILNGTKMWIT 178 (399)
T ss_dssp HHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred ccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEe--CCEEEEEEEEEeEC
Confidence 9998888888777778899999999999999999999999999999999999999999999995 45699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++ +|+++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||. ++|+.
T Consensus 179 ~a~~Ad~~~v~a~~~----------~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~ 247 (399)
T 3swo_A 179 NGNLADVATVWAQTD----------DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLS 247 (399)
T ss_dssp TTTTCSEEEEEEBCT----------TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTH
T ss_pred CCCccCEEEEEEEeC----------CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHH
Confidence 999999999999974 3589999999999999999999999999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
..+..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +.
T Consensus 248 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~-~~ 326 (399)
T 3swo_A 248 APLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEG-VR 326 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999874 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|.++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 327 ~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~R 368 (399)
T 3swo_A 327 PEQISLGKLNNVREAIAIARECRTLLGGSGITL-------------E-------------------------YSPLRHAN 368 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBS-------------S-------------------------STHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCcccccC-------------C-------------------------CcHHHHHH
Confidence 788999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 369 d-----a~-----~~~i~~Gt~~i~~~~ 386 (399)
T 3swo_A 369 N-----LE-----SVLTYEGTSEMHLLS 386 (399)
T ss_dssp H-----HH-----HHHHSSSCHHHHHHH
T ss_pred H-----hh-----cceeecCHHHHHHHH
Confidence 9 99 999999999999998
No 21
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-63 Score=540.15 Aligned_cols=361 Identities=27% Similarity=0.422 Sum_probs=336.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.| .+.|+.+.+|+++|+.|++.||+++.+|++|||.|+++.+++.++|++++.|
T Consensus 11 ~~~~~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~ 86 (385)
T 2eba_A 11 LTPEE----KEVQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVD 86 (385)
T ss_dssp SCHHH----HHHHHHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhC
Confidence 57777 57889999999887765 3456778899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCC-CCCceEEEEcCCCCEEEEEEEEEee
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDA-GSIKTRAVLSPDGKHYILNGSKIWI 229 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~-~~~~T~A~~~~dG~~y~LnG~K~~i 229 (677)
+++++.+.+|.+++...|..+|+++||++|||++++|++++|+++|||++|||+ .+++|+|++ +|++|+|||+|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~--~~~g~~lnG~K~~~ 164 (385)
T 2eba_A 87 SGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARR--EGDTWVLNGTKMWI 164 (385)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC----CEEEEEEEEEEE
T ss_pred chHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEE--eCCEEEEEeeeecc
Confidence 999988888877767788899999999999999999999999999999999999 999999998 45569999999999
Q ss_pred cCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchH
Q psy2177 230 SNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGF 309 (677)
Q Consensus 230 sna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~ 309 (677)
||++.||+++|+|+++ +| + +++|+||++.|||++.+.|+++|++++++++|.||||+||.+++| .+++|+
T Consensus 165 s~~~~Ad~~~v~a~~~-----~g---~-~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~ 234 (385)
T 2eba_A 165 TNGNLAHLAVIWAKDE-----GG---E-VLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGL 234 (385)
T ss_dssp ETTTTCSEEEEEEECC------------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCST
T ss_pred CCCcccCEEEEEEEeC-----CC---c-EEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchH
Confidence 9999999999999974 12 2 899999999999999999999999999999999999999999999 789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc
Q psy2177 310 KVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQD 389 (677)
Q Consensus 310 ~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~ 389 (677)
+..+..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+. +
T Consensus 235 ~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~-~ 313 (385)
T 2eba_A 235 KAPLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGK-L 313 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999864 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhh
Q psy2177 390 YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVL 469 (677)
Q Consensus 390 ~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~ 469 (677)
...+++++|.++++.+.++++.++|++||.||+. + +|++|+|
T Consensus 314 ~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~-------------~-------------------------~~l~r~~ 355 (385)
T 2eba_A 314 TPAQVSLAKRQNVWKALQAARMARDILGGSGITL-------------E-------------------------YHAIRHM 355 (385)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T-------------------------SSHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCC-------------c-------------------------ChHHHHH
Confidence 5678999999999999999999999999999999 8 9999999
Q ss_pred hhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 470 TEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 470 RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
|| ++ +..|++|++++++..
T Consensus 356 Rd-----a~-----~~~~~~G~~~~~~~~ 374 (385)
T 2eba_A 356 LN-----LE-----TVYTYEGTHDVHTLV 374 (385)
T ss_dssp HH-----HH-----HHTTSSSCHHHHHHH
T ss_pred Hh-----cc-----CceeeCChHHHHHHH
Confidence 99 99 999999999999998
No 22
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=2.8e-63 Score=550.73 Aligned_cols=361 Identities=24% Similarity=0.340 Sum_probs=335.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.++.+.+|+++|+.|.+.||+++.+| +|||.|++..+++.++|+++++|
T Consensus 55 l~~e~----~~l~~~~r~f~~~~~~p~~~~~~~~~~~p~~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~ 129 (436)
T 2ix5_A 55 LTPEE----QAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIARVD 129 (436)
T ss_dssp SCHHH----HHHHHHHHHHHHHHTHHHHHHHHHHTCCCGGGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCHHH----HHHHHHHHHHHHhhCChhhHHHHhcCCCCHHHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhC
Confidence 67787 578899999998877663 334567899999999999999999999 99999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+.+|..++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++ |++|+|||+|+|||
T Consensus 130 ~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~--gdg~vLnG~K~~is 207 (436)
T 2ix5_A 130 ASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKV--EGGWKINGQKRWIG 207 (436)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEEE
T ss_pred ccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEe--CCEEEEeeeccCCC
Confidence 9988877888777777888999999999999999999999999999999999999999999984 55699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|+..||+++|+|+++. + .++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+ +|+.
T Consensus 208 ~a~~Ad~~lv~Ar~~~---~-----~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~ 278 (436)
T 2ix5_A 208 NSTFADLLIIFARNTT---T-----NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQ 278 (436)
T ss_dssp TTTTCSEEEEEEEETT---T-----SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHH
T ss_pred CCcccCEEEEEEEECC---C-----CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHH
Confidence 9999999999999842 1 36899999999999999999999999999999999999999999999976 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
.++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.++++++++++++++..+|.+. +.
T Consensus 279 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~-~~ 357 (436)
T 2ix5_A 279 DTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQ-MT 357 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
..+++++|+++++.+.++++.++|++||.||+. + +|++|+||
T Consensus 358 ~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~-------------e-------------------------~~l~r~~R 399 (436)
T 2ix5_A 358 PGQASLGKAWISSKARETASLGRELLGGNGILA-------------D-------------------------FLVAKAFC 399 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBG-------------G-------------------------GSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCcccccc-------------C-------------------------ChHHHHHH
Confidence 678999999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|+++|++..
T Consensus 400 d-----a~-----~~~i~~Gt~ei~~~~ 417 (436)
T 2ix5_A 400 D-----LE-----PIYTYEGTYDINTLV 417 (436)
T ss_dssp H-----HH-----HHHHSSSCHHHHHHH
T ss_pred H-----hh-----cceeecCHHHHHHHH
Confidence 9 99 999999999999998
No 23
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.4e-63 Score=540.23 Aligned_cols=352 Identities=22% Similarity=0.334 Sum_probs=320.7
Q ss_pred HHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhh
Q psy2177 86 DPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSI 163 (677)
Q Consensus 86 ~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~ 163 (677)
+.+++|+++.+.|. +.|+.+.+|+++|+.|.+.||+++.+|++|||.|+++.+++.+.|++++.|+++++.+.+|..+
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~ 81 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMA 81 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 45677887777663 4566788999999999999999999999999999999999999999999999999888887656
Q ss_pred HHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEE
Q psy2177 164 GFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQ 243 (677)
Q Consensus 164 g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Ar 243 (677)
+...|. +|+++||++|||++++|+ +.|+++|||++|||+.+++|+|+++ |++|+|||+|+||||++.||+++|+|+
T Consensus 82 ~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~--~~g~~lnG~K~~~s~~~~Ad~~~v~a~ 157 (366)
T 1r2j_A 82 AWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLD--GDTAVVDGHKVWTTAAAYADHLVVFGL 157 (366)
T ss_dssp HHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEE--TTEEEEEEEEEEETTTTTCSEEEEEEB
T ss_pred HHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEe--CCEEEEEEEEecccCCcccCEEEEEEE
Confidence 667788 999999999999999999 9999999999999999999999985 456999999999999999999999999
Q ss_pred cCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHHHH-HHHHHHHHHH
Q psy2177 244 TPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFKVA-MQILNNGRFG 322 (677)
Q Consensus 244 t~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~~~-~~~l~~~Rl~ 322 (677)
++ + + ++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+++|+..+ +..++.+|+.
T Consensus 158 ~~---~--~----g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~ 228 (366)
T 1r2j_A 158 QE---D--G----SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKS 228 (366)
T ss_dssp CS---S--S----CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHH
T ss_pred eC---C--C----ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHH
Confidence 74 1 1 68999999999999999999999999999999999999999999999999999988 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHH
Q psy2177 323 MAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDYHLEAAISKVFAS 402 (677)
Q Consensus 323 ~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~~~~~a~aK~~as 402 (677)
.++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+..+...+++++|.+++
T Consensus 229 ~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~ 308 (366)
T 1r2j_A 229 VAWGCVGILRACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAA 308 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998762345678999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcC
Q psy2177 403 EAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVD 482 (677)
Q Consensus 403 e~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~ 482 (677)
+.+.++++.++|++||.||+. + +|++|+||| ++
T Consensus 309 ~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~~r~~Rd-----a~---- 341 (366)
T 1r2j_A 309 ERAAAGAATAAQVLASAGARE-------------G-------------------------HVVERAYRD-----AK---- 341 (366)
T ss_dssp HHHHHHHHHHHHHHGGGGC---------------C-------------------------CHHHHHHHH-----HH----
T ss_pred HHHHHHHHHHHHhhCCeeecC-------------C-------------------------CcHHHHHHh-----cc----
Confidence 999999999999999999999 8 999999999 99
Q ss_pred CccccccCchHHhhhc
Q psy2177 483 PVTKFFDEVNDPLKND 498 (677)
Q Consensus 483 pi~~i~eGtn~i~~~~ 498 (677)
+..|++|++++++..
T Consensus 342 -~~~~~~G~~~~~~~~ 356 (366)
T 1r2j_A 342 -LMEIIEGSSEMCRVM 356 (366)
T ss_dssp -HHHHSSSCHHHHHHH
T ss_pred -CceecCCHHHHHHHH
Confidence 999999999999998
No 24
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=4e-63 Score=541.85 Aligned_cols=365 Identities=29% Similarity=0.464 Sum_probs=341.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCC-HHHHHHHHHcCCCCCCCcccCCCCCC--CHHHHHHHHHHHh
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVE-PNTLEGLWDLGAFSLQVPQDLGGLGL--TNTQYARMVEIVG 147 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p-~e~~~~l~~~Gl~~l~vP~eyGG~Gl--s~~~~~~v~e~la 147 (677)
+++|| +++++.+++|+++.+.|. +.|+.+.+| +++|+.|++.||+++.+|++|||.|+ +..+++.+.|+++
T Consensus 5 ~~~~~----~~l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela 80 (397)
T 3mpi_A 5 LSKEL----QMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIA 80 (397)
T ss_dssp CCHHH----HHHHHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHH
Confidence 57888 689999999999888763 456778899 99999999999999999999999999 9999999999999
Q ss_pred ccCchhHHHHHHhhhhHHH-HHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEE
Q psy2177 148 GNDLAVGIVLGAHQSIGFK-GILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSK 226 (677)
Q Consensus 148 ~~d~s~~~~l~~h~~~g~~-~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K 226 (677)
+.|+++++.+.+| .++.. .|..+|+++||++|||++++|++++|+++|||.+|||+.+++|+|+++ |++|+|||+|
T Consensus 81 ~~~~~~~~~~~~~-~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~--~~g~~lnG~K 157 (397)
T 3mpi_A 81 RGSSALRVQLNME-VLGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDK--GDHWLLNGSK 157 (397)
T ss_dssp HHCHHHHHHHHHH-TTTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEEC--SSEEEEEEEE
T ss_pred hhCchHHHHHHHH-HHhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEe--CCEEEEEEEE
Confidence 9999999888887 44445 888999999999999999999999999999999999999999999994 5569999999
Q ss_pred EeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEE-ecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCC
Q psy2177 227 IWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIV-ERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGV 305 (677)
Q Consensus 227 ~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlV-p~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~ 305 (677)
+|+||++.||+++|+|+++.. .+ ..++++|+| |++.|||++ +.|+++|++++++++|.||||+||.+++||.+
T Consensus 158 ~~~s~~~~Ad~~~v~a~~~~~---~~--~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~ 231 (397)
T 3mpi_A 158 TWISNAAQADVLIYYAYTDKA---AG--SRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKP 231 (397)
T ss_dssp EEEETTTTCSSEEEEEESCGG---GG--GGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESST
T ss_pred EeeCCCcccCEEEEEEEcCCC---CC--CCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCC
Confidence 999999999999999998531 12 357999999 999999999 99999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy2177 306 GNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDN 385 (677)
Q Consensus 306 g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~ 385 (677)
++|+...+..++..|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+.+++++++++.++..+|.
T Consensus 232 ~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~ 311 (397)
T 3mpi_A 232 GDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDE 311 (397)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCCh
Q psy2177 386 GSQDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPY 465 (677)
Q Consensus 386 ~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 465 (677)
+..+...+++++|+++++.+.++++.++|++||.||+. + +|+
T Consensus 312 ~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------------------~~~ 353 (397)
T 3mpi_A 312 GRLNNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYST-------------E-------------------------YPV 353 (397)
T ss_dssp TCTEEHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST-------------T-------------------------SHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecC-------------C-------------------------CCH
Confidence 74556789999999999999999999999999999999 8 999
Q ss_pred hhhhhhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 466 PEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 466 er~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
+|+||| ++ +..|++|+++|++..
T Consensus 354 ~r~~Rd-----a~-----~~~i~~Gt~ei~~~~ 376 (397)
T 3mpi_A 354 ARFYRD-----AP-----TYYMVEGSANICKMI 376 (397)
T ss_dssp HHHHHH-----TT-----HHHHSSSCHHHHHHH
T ss_pred HHHHhh-----cc-----ceeeecCHHHHHHHH
Confidence 999999 99 999999999999998
No 25
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=4e-62 Score=533.35 Aligned_cols=362 Identities=25% Similarity=0.373 Sum_probs=335.7
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++.+.|. +.|+.+.+|+++|+.|++.||+++.+ ++|||.|++..+++.+.|++++.|
T Consensus 14 ~~~e~----~~l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~~~ 88 (392)
T 1siq_A 14 LTTDE----ILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLARELERVD 88 (392)
T ss_dssp SCHHH----HHHHHHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHHHHHTTC
T ss_pred CCHHH----HHHHHHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHHHhC
Confidence 67777 578899999998877663 34566789999999999999999999 999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|.+++...|..+|+++||++|||++++|++++|+++|||++|||+.+++|+|+++++|++|+|||+|+|||
T Consensus 89 ~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs 168 (392)
T 1siq_A 89 SGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWIT 168 (392)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeec
Confidence 99888777776666677888999999999999999999999999999999999999999999964466799999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHH
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFK 310 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~ 310 (677)
|++.||+++|+|+++. .++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||.+ .|+.
T Consensus 169 ~~~~Ad~~~v~a~~~~---------g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~ 238 (392)
T 1siq_A 169 NSPMADLFVVWARCED---------GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLG 238 (392)
T ss_dssp TGGGCSEEEEEEEETT---------SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSH
T ss_pred CCcccCEEEEEEEECC---------CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-cCHH
Confidence 9999999999999841 24899999999999999999999999999999999999999999999876 6888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCch
Q psy2177 311 VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQDY 390 (677)
Q Consensus 311 ~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~~ 390 (677)
..+..++..|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.+++++++++++.++..+|.+.. .
T Consensus 239 ~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~-~ 317 (392)
T 1siq_A 239 GPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKA-A 317 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-c
Confidence 888999999999999999999999999999999999999999999999999999999999999999999999988643 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhh
Q psy2177 391 HLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLT 470 (677)
Q Consensus 391 ~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~R 470 (677)
...++++|.++++.+.+++++++|++||.||+. + +|++|+||
T Consensus 318 ~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~-------------~-------------------------~~l~r~~R 359 (392)
T 1siq_A 318 PEMVSLLKRNNCGKALDIARQARDMLGGNGISD-------------E-------------------------YHVIRHAM 359 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSG-------------G-------------------------GSHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC-------------C-------------------------CcHHHHHh
Confidence 677899999999999999999999999999999 8 99999999
Q ss_pred hhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 471 EDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 471 D~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
| ++ +..|++|++++++..
T Consensus 360 d-----~~-----~~~~~~G~~~~~~~~ 377 (392)
T 1siq_A 360 N-----LE-----AVNTYEGTHDIHALI 377 (392)
T ss_dssp H-----HH-----HHTTSSSCHHHHHHH
T ss_pred h-----Cc-----CCeeecCcHHHHHHH
Confidence 9 99 999999999999998
No 26
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=5.2e-63 Score=544.18 Aligned_cols=368 Identities=24% Similarity=0.321 Sum_probs=329.5
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc--ccCcC------------------CCCCHHHHHHHHHcCCCCCCCcccCCCC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL--KNDSL------------------ETVEPNTLEGLWDLGAFSLQVPQDLGGL 132 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~--~~d~~------------------~~~p~e~~~~l~~~Gl~~l~vP~eyGG~ 132 (677)
+++|+ +++++.+++|+++.+.|. +.|+. ..+|+++|+.|.+.||+++.+|++|||.
T Consensus 9 ~~~~~----~~l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~~~GG~ 84 (415)
T 4hr3_A 9 PSARA----AELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGG 84 (415)
T ss_dssp CCHHH----HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCCTTTSC
T ss_pred CCHHH----HHHHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCHHHCCC
Confidence 57787 578899999999876552 12221 2367899999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhccCchhHHHHHH-hhhhHHHHHHhcCChhhhhccccccccCCccccccccCCC-CCCCCCCCceE
Q psy2177 133 GLTNTQYARMVEIVGGNDLAVGIVLGA-HQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPA-SGSDAGSIKTR 210 (677)
Q Consensus 133 Gls~~~~~~v~e~la~~d~s~~~~l~~-h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~-~GSD~~~~~T~ 210 (677)
|++..+++.++|++++.|.+..+.... +...+...|..+|+++||++|||++++|++++|+++|||+ +|||+.+++|+
T Consensus 85 g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~ 164 (415)
T 4hr3_A 85 GLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAAT 164 (415)
T ss_dssp CCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCE
T ss_pred CCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeE
Confidence 999999999999999987554433222 2222336788999999999999999999999999999999 99999999999
Q ss_pred EEEcCCCCEEEEEEEEEeecCccc--cCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCC--c
Q psy2177 211 AVLSPDGKHYILNGSKIWISNGGF--AEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASN--T 286 (677)
Q Consensus 211 A~~~~dG~~y~LnG~K~~isna~~--Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~--t 286 (677)
|+++ |++|+|||+|+||||+.. ||+++|+|+++.. +.+.+++++|+||++.|||++.++|+++|+++++ +
T Consensus 165 A~~~--g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~----~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~ 238 (415)
T 4hr3_A 165 AVVE--GDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPN----AHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGH 238 (415)
T ss_dssp EEEE--TTEEEEEEEEEEEETTTSTTEEEEEEEEECCTT----SCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCE
T ss_pred EEEE--CCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCC----CCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCe
Confidence 9994 556999999999999966 9999999998532 1223689999999999999999999999999987 9
Q ss_pred eEEEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHH
Q psy2177 287 AEVYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMA 366 (677)
Q Consensus 287 ~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~ 366 (677)
++|.||||+||.+++||.+++|+..++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.
T Consensus 239 ~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~ 318 (415)
T 4hr3_A 239 GVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADAR 318 (415)
T ss_dssp EEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHH
T ss_pred eEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhh
Q psy2177 367 LLHYVTESLAYMISGNMDNG-SQDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKES 445 (677)
Q Consensus 367 ~~~~aa~al~~~~a~~~d~~-~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (677)
+++++++++++.++..+|.. ..+...+++++|+++++.+.++++.++|++||.||+. +
T Consensus 319 ~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~-------------~-------- 377 (415)
T 4hr3_A 319 IAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSN-------------D-------- 377 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSS-------------S--------
T ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-------------C--------
Confidence 99999999999999998873 2345788999999999999999999999999999999 8
Q ss_pred hHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhc
Q psy2177 446 QSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKND 498 (677)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~ 498 (677)
+|++|+||| ++ +..|++|+++|++..
T Consensus 378 -----------------~~~~r~~Rd-----a~-----~~~i~~Gt~ei~~~~ 403 (415)
T 4hr3_A 378 -----------------FPLAAAWVN-----AR-----ALRLADGPDEVHRGV 403 (415)
T ss_dssp -----------------SSHHHHHHH-----HH-----HTTTTTSCHHHHHHH
T ss_pred -----------------chHHHHHHH-----hh-----hheeecCcHHHHHHH
Confidence 999999999 99 999999999999999
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=2.5e-60 Score=526.33 Aligned_cols=369 Identities=23% Similarity=0.310 Sum_probs=330.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCcc--c----CcCC-CCC--HHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHH
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPLK--N----DSLE-TVE--PNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMV 143 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~~--~----d~~~-~~p--~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~ 143 (677)
+++|| +++++.+++|+++.+.|.. . |..+ .+| +++|+.|.+.||+++.+|++|||.|++..+++.++
T Consensus 7 ~~~e~----~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ 82 (438)
T 3mkh_A 7 LSASQ----KGTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAILV 82 (438)
T ss_dssp CCHHH----HHHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHHH
Confidence 58888 6789999999999876632 2 2233 565 89999999999999999999999999999999999
Q ss_pred HHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccC--CccccccccCCCCCC-----CCCCCceEEEEcCC
Q psy2177 144 EIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTG--KEFAAFCLTEPASGS-----DAGSIKTRAVLSPD 216 (677)
Q Consensus 144 e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~G--e~~~a~alTEp~~GS-----D~~~~~T~A~~~~d 216 (677)
|++++.|+++++.+..| .++..+|..+|+++ |++|||++++| +.++|+++|||++|| |+.+++|+|+++
T Consensus 83 eela~~~~~~~~~~~~~-~~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~-- 158 (438)
T 3mkh_A 83 EECYSVEPSAALTIFAT-GLGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLE-- 158 (438)
T ss_dssp HHHHHHCHHHHHHHHHH-HHHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEE--
T ss_pred HHHHhhChhHHHHHHHh-hHHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEe--
Confidence 99999999988776654 45567788899999 99999999996 589999999999998 689999999984
Q ss_pred CCEEEEEEEEEeecCcc-----ccCEEEEEEEcCCC--CCCCCcccCeEEEEEEecCC-----CC-eeeCCCCCcCCCCC
Q psy2177 217 GKHYILNGSKIWISNGG-----FAEIMTVFAQTPVK--DEKTGKVVDKVTAFIVERSF-----GG-VTSGPPEKKMGIKA 283 (677)
Q Consensus 217 G~~y~LnG~K~~isna~-----~Ad~~lV~Art~~~--d~~~g~~~~gis~FlVp~~~-----~G-V~v~~~~~~~G~rg 283 (677)
|++|+|||+|+||||++ .||+++|+|++... ++ ++.+..++++|+||++. || |++.+.|+++|+++
T Consensus 159 g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~-~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~ 237 (438)
T 3mkh_A 159 GDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEE-GQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTS 237 (438)
T ss_dssp TTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCT-TCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTT
T ss_pred CCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCc-ccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcC
Confidence 55699999999999997 89999999998531 11 12223589999999875 88 99999999999999
Q ss_pred CCceEEEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CCCCCcHHHHHHH
Q psy2177 284 SNTAEVYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFG-RRIDSFGTIQEKL 362 (677)
Q Consensus 284 ~~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg-~pi~~~~~vq~~L 362 (677)
+++++|.||||+||.+++||.+++|+..++..++.+|+.+++.++|+++++++.+++|+++|+||| +||+++|.+|++|
T Consensus 238 ~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~l 317 (438)
T 3mkh_A 238 VSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLL 317 (438)
T ss_dssp CCCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHH
T ss_pred CCceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHH
Q psy2177 363 ARMALLHYVTESLAYMISGNMDNGSQD---YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQ 439 (677)
Q Consensus 363 a~m~~~~~aa~al~~~~a~~~d~~~~~---~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~ 439 (677)
++|.+++++++++++.++..+|.+..+ ....++++|+++++.+.+++++++|++||.||+. +
T Consensus 318 a~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~-------------~-- 382 (438)
T 3mkh_A 318 SGVKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDL-------------Q-- 382 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCT-------------T--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccC-------------C--
Confidence 999999999999999999999876532 2234678999999999999999999999999999 8
Q ss_pred HHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCch-HHhhhc
Q psy2177 440 KAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVN-DPLKND 498 (677)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn-~i~~~~ 498 (677)
+|++|+||| ++ +..|++|+| ++++..
T Consensus 383 -----------------------~~l~r~~Rd-----a~-----~~~i~~Gt~~~v~~~~ 409 (438)
T 3mkh_A 383 -----------------------RPFSDLLNT-----AV-----VLPIFDGGNVGIRRRH 409 (438)
T ss_dssp -----------------------SSHHHHHHH-----HT-----HHHHSSSCTTTTHHHH
T ss_pred -----------------------CcHHHHHHH-----hh-----eeeeecCChHHHHHHH
Confidence 999999999 99 999999999 999888
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.9e-59 Score=519.70 Aligned_cols=371 Identities=18% Similarity=0.233 Sum_probs=331.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCcc--cCcC----CCCC--HHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHH
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPLK--NDSL----ETVE--PNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVE 144 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~~--~d~~----~~~p--~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e 144 (677)
+++|+ +++++.+++|+++.+.|.. .|+. +.+| +++|+.|++.||+++.+|++|||.|++..+++.++|
T Consensus 6 ~~~e~----~~l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~e 81 (439)
T 2c12_A 6 LSPSQ----LEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILE 81 (439)
T ss_dssp CCHHH----HHHHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHH
Confidence 57777 5789999999999887642 2332 3455 899999999999999999999999999999999999
Q ss_pred HHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccc--cCCccccccccCCCCCC-----CCCCCceEEEEcCCC
Q psy2177 145 IVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVS--TGKEFAAFCLTEPASGS-----DAGSIKTRAVLSPDG 217 (677)
Q Consensus 145 ~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~--~Ge~~~a~alTEp~~GS-----D~~~~~T~A~~~~dG 217 (677)
++++.|+++++.+..| .++...|..+|+++||++|||+++ +|++++|+++|||++|| |+.+++|+|+++ |
T Consensus 82 ela~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~--~ 158 (439)
T 2c12_A 82 ELFAVEPATSITIVAT-ALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKV--G 158 (439)
T ss_dssp HHHTTCCTTHHHHHHH-HHHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEE--T
T ss_pred HHHhhChHHHHHHHHh-HHHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEc--C
Confidence 9999999999887776 445567889999999999999999 69999999999999998 688899999985 4
Q ss_pred CEEEEEEEEEeecCcc-----ccCEEEEEEEc-CC---CCCCCCcccCeEEEEEEecCCC------CeeeCCCCCcCCCC
Q psy2177 218 KHYILNGSKIWISNGG-----FAEIMTVFAQT-PV---KDEKTGKVVDKVTAFIVERSFG------GVTSGPPEKKMGIK 282 (677)
Q Consensus 218 ~~y~LnG~K~~isna~-----~Ad~~lV~Art-~~---~d~~~g~~~~gis~FlVp~~~~------GV~v~~~~~~~G~r 282 (677)
++|+|||+|+||||++ .||+++|+|++ +. .+++.+.+..++++|+||++.| ||++.+.|+++|++
T Consensus 159 ~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r 238 (439)
T 2c12_A 159 NEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHI 238 (439)
T ss_dssp TEEEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCT
T ss_pred CEEEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccC
Confidence 5699999999999997 89999999998 41 1100011235799999999998 88899999999999
Q ss_pred CCCceEEEEcceecccccccCCCcchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccCCCCCCcHHHHH
Q psy2177 283 ASNTAEVYYEDVKVPVENVLGGVGNGFK-VAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQ-RVQFGRRIDSFGTIQE 360 (677)
Q Consensus 283 g~~t~~v~fddV~VP~~~lLG~~g~G~~-~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~-R~qfg~pi~~~~~vq~ 360 (677)
++++++|.||||+||.+++||.+++|+. .++..++.+|+.+++.++|+++++++.+++|+++ |++||+||+++|.+|+
T Consensus 239 ~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~ 318 (439)
T 2c12_A 239 TTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVAD 318 (439)
T ss_dssp TCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHH
T ss_pred CCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHH
Confidence 9999999999999999999999999999 8999999999999999999999999999999996 7899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHH
Q psy2177 361 KLARMALLHYVTESLAYMISGNMDNGSQD---YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKE 437 (677)
Q Consensus 361 ~La~m~~~~~aa~al~~~~a~~~d~~~~~---~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~ 437 (677)
+|++|.+.+++++++++.++..+|.+..+ ....++++|+++++.+.++++.++|++||.||+. +
T Consensus 319 ~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~-------------~ 385 (439)
T 2c12_A 319 KLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAK-------------D 385 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBT-------------T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcC-------------C
Confidence 99999999999999999999999876543 2346899999999999999999999999999999 8
Q ss_pred HHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCch-HHhhhc
Q psy2177 438 EQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVN-DPLKND 498 (677)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn-~i~~~~ 498 (677)
+|++|+||| ++ +..|++|++ ++++..
T Consensus 386 -------------------------~~l~r~~Rd-----a~-----~~~i~~G~~~~~~~~~ 412 (439)
T 2c12_A 386 -------------------------MSFPRLLNE-----VM-----CYPLFDGGNIGLRRRQ 412 (439)
T ss_dssp -------------------------SSHHHHHHH-----HT-----TTTTSSSCTTTTHHHH
T ss_pred -------------------------ChHHHHHHh-----hh-----cceeecCChHHHHHHH
Confidence 999999999 99 999999999 688877
No 29
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-60 Score=525.49 Aligned_cols=372 Identities=23% Similarity=0.306 Sum_probs=326.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCCc-----ccCcC-----CC-----CCHHHHHHHHHcCCCCCCCcccCCCCCCCHH
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDPL-----KNDSL-----ET-----VEPNTLEGLWDLGAFSLQVPQDLGGLGLTNT 137 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p~-----~~d~~-----~~-----~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~ 137 (677)
+++|+ +++++.+++|+++.+.|. +.|+. .. +++++|+.|.+.||+++.+|+ |.|++..
T Consensus 23 ~~~e~----~~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~---G~g~~~~ 95 (428)
T 2wbi_A 23 QTRKG----QEVLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA---VSGLSHV 95 (428)
T ss_dssp CCHHH----HHHHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHH---HHCCCHH
T ss_pred CCHHH----HHHHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC---CCCCCHH
Confidence 57777 578899999998876552 22321 12 457899999999999999999 8899999
Q ss_pred HHHHHHHHHhccCchh-HHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCC-CCCCCCCCceEEEEcC
Q psy2177 138 QYARMVEIVGGNDLAV-GIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPA-SGSDAGSIKTRAVLSP 215 (677)
Q Consensus 138 ~~~~v~e~la~~d~s~-~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~-~GSD~~~~~T~A~~~~ 215 (677)
+++.+.|++++.+.+. ++....|..++...|..+|+++||++|||++++|++++|+++|||+ +|||+.+++|+|+++
T Consensus 96 ~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~- 174 (428)
T 2wbi_A 96 DYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRD- 174 (428)
T ss_dssp HHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEE-
T ss_pred HHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEe-
Confidence 9999999999987432 2222223234456788899999999999999999999999999999 999999999999984
Q ss_pred CCCEEEEEEEEEeecCccc--cCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCC---ceEEE
Q psy2177 216 DGKHYILNGSKIWISNGGF--AEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASN---TAEVY 290 (677)
Q Consensus 216 dG~~y~LnG~K~~isna~~--Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~---t~~v~ 290 (677)
|++|+|||+|+||||+.. ||+++|+|+++. +.+.+..++++|+||++.|||++.+.|+++|+++++ +++|.
T Consensus 175 -~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~---~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~ 250 (428)
T 2wbi_A 175 -EDSYVINGKKWWSSGAGNPKCKIAIVLGRTQN---TSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIH 250 (428)
T ss_dssp -TTEEEEEEEEEEEETTTSTTEEEEEEEEECCC---TTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEE
T ss_pred -CCEEEEEeEEeccCCCCCCcCCEEEEEEEeCC---ccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEE
Confidence 556999999999999987 999999999852 111223579999999999999999999999999984 99999
Q ss_pred EcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHH
Q psy2177 291 YEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHY 370 (677)
Q Consensus 291 fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~ 370 (677)
||||+||.+++||.+++|+..++..++.+|+.+++.++|+++++++.+++|+++|+|||+||+++|.+|++|++|.++++
T Consensus 251 fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~ 330 (428)
T 2wbi_A 251 FNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIE 330 (428)
T ss_dssp EEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHH
T ss_pred eCceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHH
Q psy2177 371 VTESLAYMISGNMDN-GSQDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFT 449 (677)
Q Consensus 371 aa~al~~~~a~~~d~-~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (677)
+++++++.++..+|. +..+...+++++|+++++.+.++++.++|++||+||+. +
T Consensus 331 aar~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~-------------~------------ 385 (428)
T 2wbi_A 331 KIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQ-------------D------------ 385 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGST-------------T------------
T ss_pred HHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCC-------------C------------
Confidence 999999999998886 22345678999999999999999999999999999999 8
Q ss_pred hhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhccCCCcchhHHHHH
Q psy2177 450 MNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKNDSLETVEPNTLEGI 511 (677)
Q Consensus 450 ~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~~~~~~~~ia~~~l 511 (677)
+|++|+||| ++ +..|++|++++++.. |+...+
T Consensus 386 -------------~~~~r~~Rd-----a~-----~~~i~~G~~~~~~~~-------ia~~~l 417 (428)
T 2wbi_A 386 -------------YPLANMYAI-----TR-----VLRLADGPDEVHLSA-------IATMEL 417 (428)
T ss_dssp -------------SSHHHHHHH-----HH-----HHTTTTSCHHHHHHH-------HHHHHH
T ss_pred -------------CcHHHHHHH-----Hh-----hcEecCChHHHHHHH-------HHHHHH
Confidence 999999999 99 999999999999998 775544
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=6.4e-57 Score=491.56 Aligned_cols=356 Identities=19% Similarity=0.236 Sum_probs=314.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCC-CCHHHHHHHHHHHhcc
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLG-LTNTQYARMVEIVGGN 149 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~G-ls~~~~~~v~e~la~~ 149 (677)
+|+|| +++++.+++|+++ +.| .+.|+++.+|+++|+.|.+.||+++.+|++|||.| ++..+++.++|++++.
T Consensus 9 lt~e~----~~~~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~ 83 (395)
T 3mxl_A 9 LTPAG----RTVVDLLAGVIPR-ISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEA 83 (395)
T ss_dssp CSHHH----HHHHHHHTTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTT
T ss_pred CCHHH----HHHHHHHHHHHHH-HhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhh
Confidence 78888 5788888888875 344 34677889999999999999999999999999999 9999999999999999
Q ss_pred CchhHHHHHHhhhhHHHHH--HhcCChhhh---hccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEE
Q psy2177 150 DLAVGIVLGAHQSIGFKGI--LLVGNPEQK---AKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNG 224 (677)
Q Consensus 150 d~s~~~~l~~h~~~g~~~i--~~~Gt~eqk---~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG 224 (677)
|+++++.+.+|.+.+...+ ..+|+++|| ++|||++.+|+.++|+++|||++|+ ..++|+ +|++|+|||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~t~-----~~~g~~lnG 156 (395)
T 3mxl_A 84 DASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELHSD-----GAGGWLLSG 156 (395)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEEEC-----SSSCEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceEEe-----cCCEEEEee
Confidence 9999988888876554443 356999999 9999999999999999999998753 333332 455699999
Q ss_pred EEEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccC-
Q psy2177 225 SKIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLG- 303 (677)
Q Consensus 225 ~K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG- 303 (677)
+|+||||+..||+++|+|+++.. .+ ..++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||
T Consensus 157 ~K~~is~a~~Ad~~~v~a~~~~~---~~--~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~ 231 (395)
T 3mxl_A 157 RKVLVSMAPIATHFFVHAQRRDD---DG--SVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLER 231 (395)
T ss_dssp EEEEETTGGGCSEECCCEEEECT---TS--CEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEE
T ss_pred EEEEecCccccCEEEEEEEeCCC---CC--CCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCC
Confidence 99999999999999999998531 12 2579999999999999999999999999999999999999999999999
Q ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2177 304 -GVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGN 382 (677)
Q Consensus 304 -~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~ 382 (677)
.++.|+...+..++.+|+.+++.++|+++++++.+++|++ |+||+++|.+|++|++|.+++++++++++.++..
T Consensus 232 ~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~ 306 (395)
T 3mxl_A 232 GPVGARRDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTN 306 (395)
T ss_dssp EESSCCCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888887777667789999999999999999999999998 5789999999999999999999999999999988
Q ss_pred hhC------CCCc-----hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhh
Q psy2177 383 MDN------GSQD-----YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMN 451 (677)
Q Consensus 383 ~d~------~~~~-----~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (677)
+|. +..+ ....++++|+++++.+.++++.++|++||.||+. +
T Consensus 307 ~d~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~Gg~g~~~-------------~-------------- 359 (395)
T 3mxl_A 307 ADAASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYTA-------------G-------------- 359 (395)
T ss_dssp HHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBT-------------T--------------
T ss_pred hhhcccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhccC-------------C--------------
Confidence 775 1111 2256788999999999999999999999999999 8
Q ss_pred hhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccc-cccCchHHhhhc
Q psy2177 452 MFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTK-FFDEVNDPLKND 498 (677)
Q Consensus 452 ~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~-i~eGtn~i~~~~ 498 (677)
+|++|+||| ++ +.+ |++|+|++++..
T Consensus 360 -----------~~~~r~~Rd-----a~-----~~~~~~~g~~~~~~~~ 386 (395)
T 3mxl_A 360 -----------HPLSRLYRD-----VR-----AGGFMQPYSYVDAVDY 386 (395)
T ss_dssp -----------SHHHHHHHH-----GG-----GGGGCSSCCHHHHHHH
T ss_pred -----------CcHHHHHHH-----HH-----hccccCCCCHHHHHHH
Confidence 999999999 99 999 999999999987
No 31
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=8e-55 Score=494.26 Aligned_cols=402 Identities=20% Similarity=0.225 Sum_probs=346.1
Q ss_pred HHHHHHHHHcCCCCCCC--cccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhcccccccc
Q psy2177 109 PNTLEGLWDLGAFSLQV--PQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVST 186 (677)
Q Consensus 109 ~e~~~~l~~~Gl~~l~v--P~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~ 186 (677)
.++++.+.+.||+++.+ |++|||.+....... .++..+.+.++.+.+|.. ....|..+| ++||++|||++.+
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~----~~~~~~~~~~~p~~~t~~-~~~~L~~~g-~eqk~~~lp~l~s 162 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFM----LHAQVEAGSLCPITMTFA-ATPLLLQML-PAPFQDWTTPLLS 162 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHH----HHHHHCSTTHHHHHHHHH-HHHHHHHHC-CGGGGGGHHHHTC
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHH----HHHHHHHhhhcHHHHHHH-HHHHHHHcC-HHHHHHHHHHHhC
Confidence 47899999999999999 799996654433322 233334445555555554 346678899 9999999999999
Q ss_pred CCc-------------cccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEcCCCCCCCCc
Q psy2177 187 GKE-------------FAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQTPVKDEKTGK 253 (677)
Q Consensus 187 Ge~-------------~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art~~~d~~~g~ 253 (677)
|++ +.|+++|||++|||+.+++|+|++++ |++|+|||+|+|+| ++.||+++|+|+++
T Consensus 163 ge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~-~g~y~LnG~K~f~S-a~~Ad~~lVlArt~-------- 232 (541)
T 3djl_A 163 DRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLE-DGSYRLVGHKWFFS-VPQSDAHLVLAQTA-------- 232 (541)
T ss_dssp SCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECT-TSCEEEEEEEEEEE-CTTSSEEEEEEEET--------
T ss_pred CCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcC-CCeEEEEEEEEeec-ccccCEEEEEEEEC--------
Confidence 998 78999999999999999999999963 34599999999999 89999999999984
Q ss_pred ccCeEEEEEEecCCC-----CeeeCCCCCcCCCCCCCceEEEEcceecccccccCCCcchHHHHHHHHHHHHHHHHHHHH
Q psy2177 254 VVDKVTAFIVERSFG-----GVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGVGNGFKVAMQILNNGRFGMAAALA 328 (677)
Q Consensus 254 ~~~gis~FlVp~~~~-----GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~Rl~~aa~~~ 328 (677)
+|+++|+||++.| ||++.+.|+++|++++++++|.|+||+ +++||.+++|+..++.+++.+|+.+++.++
T Consensus 233 --~Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~ 307 (541)
T 3djl_A 233 --GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSH 307 (541)
T ss_dssp --TEEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHH
T ss_pred --CceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999988 999999999999999999999999995 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCc-----hHHHHHHHHHHHHH
Q psy2177 329 GTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDNGSQD-----YHLEAAISKVFASE 403 (677)
Q Consensus 329 G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~~~~~-----~~~~~a~aK~~ase 403 (677)
|+++++++.+++|+++|++||+||+++|.+|++|++|.++++++++++++++..+|.+..+ .++.++++|+++++
T Consensus 308 G~a~~al~~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase 387 (541)
T 3djl_A 308 AMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICK 387 (541)
T ss_dssp HHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986432 35678999999999
Q ss_pred HHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCC
Q psy2177 404 AAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDP 483 (677)
Q Consensus 404 ~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~p 483 (677)
.+.+++++++|++||+||+. + +|++|+||| ++
T Consensus 388 ~a~~~~~~a~q~~Gg~G~~~-------------e-------------------------~~l~r~~Rd-----a~----- 419 (541)
T 3djl_A 388 RGMPFVAEAMEVLGGIGYCE-------------E-------------------------SELPRLYRE-----MP----- 419 (541)
T ss_dssp HHHHHHHHHHHHHGGGGGST-------------T-------------------------SHHHHHHHH-----HH-----
T ss_pred HHHHHHHHHHHhhCCeeecC-------------C-------------------------CcHHHHHHh-----hh-----
Confidence 99999999999999999999 8 999999999 99
Q ss_pred ccccccCchHHhhhccCCCcchhHHHHHHHHhhhHHHHHHHhcCCCCchhHHHHHHHHHHHHHhcCCCCCCCccccCcch
Q psy2177 484 VTKFFDEVNDPLKNDSLETVEPNTLEGIQYAGGHLRELQKAFKNPTAHLGLIIGEVKKRGLKSIGLSTPPSLHHVVHANL 563 (677)
Q Consensus 484 i~~i~eGtn~i~~~~~~~~~~~ia~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 563 (677)
+..||||||+|++++ |++ .+...+..+..+.+.+..+.+.. ..+....+.++..+... ..
T Consensus 420 ~~~i~eGt~ei~~~~-------i~r-~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------~~ 479 (541)
T 3djl_A 420 VNSIWEGSGNIMCLD-------VLR-VLNKQAGVYDLLSEAFVEVKGQD-RYFDRAVRRLQQQLRKP-----------AE 479 (541)
T ss_dssp HHHHGGGHHHHHHHH-------HHH-HHHHCTTHHHHHHHHHHTTTTSC-HHHHHHHHHHHHHTTSC-----------CG
T ss_pred hhheeCCcHHHHHHH-------HHH-HHHhCchHHHHHHHHHHHhhccc-hhHHHHHHHHHHHhhcc-----------ch
Confidence 999999999999999 774 45555556777777777655542 24455566665554321 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Q psy2177 564 AESGVLCSKSVVLFGEAVESLLLKYGKGVVEEQFLLNRL 602 (677)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~q~~l~rl 602 (677)
+ .+|.+.+.++.+.++ .+|.+|++..+.++|+..||
T Consensus 480 ~-~ar~~~~~~a~~~~~--~~l~~~~~~~~~~~~~~~rl 515 (541)
T 3djl_A 480 E-LGREITHQLFLLGCG--AQMLKYASPPMAQAWCQVML 515 (541)
T ss_dssp G-GHHHHHHHHHHHHHH--HHHHHHSCHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHH--HHHHHhCChHHHHHHHHHHH
Confidence 2 799999999999998 89999999999999999999
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=1.7e-55 Score=484.21 Aligned_cols=352 Identities=16% Similarity=0.122 Sum_probs=308.3
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccC
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGND 150 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d 150 (677)
+++|+ +++++.+++|+++ +.| .+.|+++.+|+++|+.|.+.||+++.+|++|||.|+++.+++.++|++++.|
T Consensus 18 ~~~~~----~~l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~ 92 (414)
T 2or0_A 18 YFQGM----GRVLDRIEVVAEE-IRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALD 92 (414)
T ss_dssp ---------CHHHHHHHHTHHH-HHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHC
T ss_pred CCccH----HHHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhC
Confidence 56666 4677888888876 444 3456778999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeec
Q psy2177 151 LAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWIS 230 (677)
Q Consensus 151 ~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~is 230 (677)
+++++.+..|. ++...|..+|+++||++||| +|+.++|+++| | +|+|+++ |++|+|||+|+|||
T Consensus 93 ~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~--~~g~~lnG~K~~is 156 (414)
T 2or0_A 93 GASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPV--DGGYVLKGRWSFSS 156 (414)
T ss_dssp HHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEE--TTEEEEEEEEEEET
T ss_pred hHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEE--CCeEEEEeeEeccC
Confidence 99988777764 55677888999999999999 79999999998 5 6889884 45699999999999
Q ss_pred CccccCEEEEEEEcCCCCCCCCcc-cCeEEEEEEecCCCCeeeC-CCCCcCCCCCCCceEEEEcceecccccccCC----
Q psy2177 231 NGGFAEIMTVFAQTPVKDEKTGKV-VDKVTAFIVERSFGGVTSG-PPEKKMGIKASNTAEVYYEDVKVPVENVLGG---- 304 (677)
Q Consensus 231 na~~Ad~~lV~Art~~~d~~~g~~-~~gis~FlVp~~~~GV~v~-~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~---- 304 (677)
|+..||+++|+|+++.. +|.. ..++++|+||++ ||++. +.|+++|++++++++|.||||+||.+++||.
T Consensus 157 ~a~~Ad~~~v~a~~~~~---~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~ 231 (414)
T 2or0_A 157 GTDHCQWAFLGAMVGDG---EGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVM 231 (414)
T ss_dssp TGGGCSEEEEEEEECC--------CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHH
T ss_pred CCchhhEEEEEEEecCC---CCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeecccccc
Confidence 99999999999998521 1210 127999999997 99999 9999999999999999999999999999986
Q ss_pred ----Cc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc-CCCCCCcHHHHHHHHHHHHHHHHHHHH
Q psy2177 305 ----VG----NGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQF-GRRIDSFGTIQEKLARMALLHYVTESL 375 (677)
Q Consensus 305 ----~g----~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qf-g~pi~~~~~vq~~La~m~~~~~aa~al 375 (677)
+| .|+...+..++.+|+.+++.++|+++++++.+++|+++|+|| |+||+++|.+|++|++|.+++++++++
T Consensus 232 ~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l 311 (414)
T 2or0_A 232 DGRAQKEAGRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVS 311 (414)
T ss_dssp HSHHHHHHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence 33 345566677889999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHhhh----CCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHH
Q psy2177 376 AYMISGNMD----NGSQD---YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSF 448 (677)
Q Consensus 376 ~~~~a~~~d----~~~~~---~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (677)
++.++..+| .+... ...+++++|+++++.+.++++.++|++||.||+. +
T Consensus 312 ~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~-------------~----------- 367 (414)
T 2or0_A 312 LIETADRFYDKVDAGKEITFEERAIGRRTQIAAAWRAVRAADEIFARAGGGALHY-------------K----------- 367 (414)
T ss_dssp HHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBT-------------T-----------
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhhcc-------------C-----------
Confidence 999999988 55431 3567899999999999999999999999999999 8
Q ss_pred HhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccC-chHHhhhc
Q psy2177 449 TMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDE-VNDPLKND 498 (677)
Q Consensus 449 ~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eG-tn~i~~~~ 498 (677)
+|++|+||| ++ +..|++| ++++++..
T Consensus 368 --------------~~l~r~~Rd-----a~-----~~~~~~G~t~~~~~~~ 394 (414)
T 2or0_A 368 --------------TPMQRFWRD-----AH-----AGLAHAVHVPGPTNHA 394 (414)
T ss_dssp --------------SSHHHHHHH-----HH-----HHHTSGGGCCHHHHHH
T ss_pred --------------CchhHHHHH-----HH-----HHHcCCcccchHHHHH
Confidence 999999999 99 9999999 99999988
No 33
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=3e-55 Score=483.65 Aligned_cols=352 Identities=14% Similarity=0.104 Sum_probs=312.5
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHH
Q psy2177 68 PYPEVLTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEI 145 (677)
Q Consensus 68 ~~p~~l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~ 145 (677)
|+|. ++++ ++++.+++|+++ +.| .+.|+.+.+|+++|+.|.+.||+++.+|++|||.|++..+++.++|+
T Consensus 31 ~~~~-~~~~------~l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~ee 102 (422)
T 2jbr_A 31 QTPD-VSGV------SMLEKIQQILPQ-IAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVT 102 (422)
T ss_dssp CCCC-CSSC------CHHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHH
T ss_pred CCCC-CCHH------HHHHHHHHHHHH-HHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHH
Confidence 4455 5654 366777778764 333 34567789999999999999999999999999999999999999999
Q ss_pred HhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEE
Q psy2177 146 VGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGS 225 (677)
Q Consensus 146 la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~ 225 (677)
+++.|+++++.+..| .++...|..+|+++||++|+|+ |+.+.|+++| | +|+|+++ |++|+|||+
T Consensus 103 la~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~--~~g~~lnG~ 166 (422)
T 2jbr_A 103 LAGACAGTAWAFSLL-CTHSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEV--EGGIILNGD 166 (422)
T ss_dssp HHHHCHHHHHHHHHH-HHHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEE--TTEEEEEEE
T ss_pred HHhhCcCHHHHHHHH-HHHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEe--CCEEEEeee
Confidence 999999998877765 4556778889999999999997 8999999988 4 5789884 456999999
Q ss_pred EEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCCC
Q psy2177 226 KIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGGV 305 (677)
Q Consensus 226 K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~ 305 (677)
|+||||+..||+++|+|+++.. +| ..++++|+||++ ||++.+.|+++|++++++++|.||||+||.+++||.+
T Consensus 167 K~~is~a~~Ad~~~v~a~~~~~---~g--~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~ 239 (422)
T 2jbr_A 167 YGWSSGCDHAEYAIVGFNRFDA---DG--NKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAK 239 (422)
T ss_dssp EEEETTGGGCSEEEEEEEEECT---TS--CEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHH
T ss_pred EeeecCCccccEEEEEEEecCC---CC--CceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeeccc
Confidence 9999999999999999998521 22 248999999997 9999999999999999999999999999999999875
Q ss_pred --------cch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccCCCCCCcHHHHHHHHHHHHHHH
Q psy2177 306 --------GNG-----FKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRV--QFGRRIDSFGTIQEKLARMALLHY 370 (677)
Q Consensus 306 --------g~G-----~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~--qfg~pi~~~~~vq~~La~m~~~~~ 370 (677)
|.| +...+..++.+|+.+++.++|+++++++.+++|+++|+ |||+||+++|.+|++|++|.++++
T Consensus 240 ~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~ 319 (422)
T 2jbr_A 240 DMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVA 319 (422)
T ss_dssp HHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcccccCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 666 66777788999999999999999999999999999998 999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh----CCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhh
Q psy2177 371 VTESLAYMISGNMD----NGSQD---YHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAK 443 (677)
Q Consensus 371 aa~al~~~~a~~~d----~~~~~---~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~ 443 (677)
+++++++.++..+| .+... ...+++++|+++++.+.++++.++|++||.||+. +
T Consensus 320 aar~~~~~aa~~~d~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~-------------~------ 380 (422)
T 2jbr_A 320 AARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMD-------------N------ 380 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBT-------------T------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhc-------------C------
Confidence 99999999999988 55431 3567899999999999999999999999999999 8
Q ss_pred hhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCch-HHhhhc
Q psy2177 444 ESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVN-DPLKND 498 (677)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn-~i~~~~ 498 (677)
+|++|+||| ++ +..|++|++ ++++..
T Consensus 381 -------------------~~l~r~~Rd-----a~-----~~~~~~G~~~e~~~~~ 407 (422)
T 2jbr_A 381 -------------------SELQRLFRD-----AH-----MTGAHAYTDYDVCAQI 407 (422)
T ss_dssp -------------------CHHHHHHHH-----HH-----HHTSSTTTCHHHHHHH
T ss_pred -------------------CcHHHHHHH-----HH-----HHhcCCccchhHHHHH
Confidence 999999999 99 999999999 999988
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=8e-55 Score=482.42 Aligned_cols=356 Identities=17% Similarity=0.214 Sum_probs=308.9
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCC-CCHHHHHHHHHHHhcc
Q psy2177 73 LTEDQSDTLKMLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLG-LTNTQYARMVEIVGGN 149 (677)
Q Consensus 73 l~~e~~~~~~~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~G-ls~~~~~~v~e~la~~ 149 (677)
+++|+ +++++.+++|+++ +.| .+.|+.+.+|+++|+.|++.||+++.+|++|||.| +++.+++.++|++++.
T Consensus 20 lt~e~----~~l~~~~r~~~~~-~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~ 94 (439)
T 3m9v_A 20 VTPAG----RVLLDRLAAHLPR-IRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARA 94 (439)
T ss_dssp SSHHH----HHHHHHHHTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHH
T ss_pred CCHHH----HHHHHHHHHHHHH-HhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhh
Confidence 57787 5788888888875 333 34577889999999999999999999999999999 8999999999999999
Q ss_pred CchhHHHHHHhhhhHHHHH--HhcCChhh---hhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEE
Q psy2177 150 DLAVGIVLGAHQSIGFKGI--LLVGNPEQ---KAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNG 224 (677)
Q Consensus 150 d~s~~~~l~~h~~~g~~~i--~~~Gt~eq---k~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG 224 (677)
|+++++.+.+|.+.....+ ..+|+++| |++|||++.+|++++|+++|||++ |+.+++|+ +|++|+|||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~--~~~~~~t~-----~~~g~vlnG 167 (439)
T 3m9v_A 95 DASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHT--AVTTLRPD-----GAGGWLLSG 167 (439)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTT--CCCEEEEC-----SSSCEEEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCC--CCCceeec-----cCCEEEEEe
Confidence 9999888888765544333 46799999 999999999999999999999985 44444433 445599999
Q ss_pred EEEeecCccccCEEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccC-
Q psy2177 225 SKIWISNGGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLG- 303 (677)
Q Consensus 225 ~K~~isna~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG- 303 (677)
+|+||||+..||+++|+|+++.. .+ ..++++|+||++.|||++.+.|+++|++++++++|.||||+||.+++||
T Consensus 168 ~K~~~s~a~~Ad~~~v~art~~~---~~--~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~ 242 (439)
T 3m9v_A 168 RKTLVSMAPVGTHFVINARTDGT---DG--PPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMR 242 (439)
T ss_dssp EEEEETTGGGCSEEEECEEECC-----C--CCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEEC
T ss_pred EEEeecCccccCEEEEEEEecCC---CC--CceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCC
Confidence 99999999999999999998531 12 2579999999999999999999999999999999999999999999999
Q ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2177 304 -GVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGN 382 (677)
Q Consensus 304 -~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~ 382 (677)
.++.|+...+..+..+|+.+++.++|+++++++.+++|++ |+||+++|.+|++|++|.+++++++++++.++..
T Consensus 243 ~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~ 317 (439)
T 3m9v_A 243 DPVGARNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RRPEPPQAAALTLVAEIDSRLYALRATAGSALTA 317 (439)
T ss_dssp CC--CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788877666667779999999999999999999999999 5689999999999999999999999999988877
Q ss_pred hhC---C---C-----CchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhh
Q psy2177 383 MDN---G---S-----QDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMN 451 (677)
Q Consensus 383 ~d~---~---~-----~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (677)
+|. . . .+....++++|+++++.+.+++++++|++||.||+. +
T Consensus 318 ~d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~~-------------~-------------- 370 (439)
T 3m9v_A 318 ADALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVGGASYTA-------------G-------------- 370 (439)
T ss_dssp HHHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGST-------------T--------------
T ss_pred HHhhccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhcC-------------C--------------
Confidence 664 1 0 112346778999999999999999999999999999 8
Q ss_pred hhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccc-cccCchHHhhhc
Q psy2177 452 MFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTK-FFDEVNDPLKND 498 (677)
Q Consensus 452 ~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~-i~eGtn~i~~~~ 498 (677)
+|++|+||| ++ +.+ |++|++++++..
T Consensus 371 -----------~~l~r~~Rd-----a~-----~~~~~~~gt~~~~~~~ 397 (439)
T 3m9v_A 371 -----------HPLARLLRD-----VQ-----AGRFMQPYAYVDAVDF 397 (439)
T ss_dssp -----------SHHHHHHHH-----TT-----GGGTSSSCCHHHHHHH
T ss_pred -----------ChHHHHHHH-----HH-----hhhhhCCCchHHHHHH
Confidence 999999999 99 999 999999998877
No 35
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=1.6e-54 Score=472.86 Aligned_cols=344 Identities=15% Similarity=0.143 Sum_probs=306.2
Q ss_pred HHHHHHHHHHHhhCCC--cccCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHh
Q psy2177 83 MLVDPVTKFFDEVNDP--LKNDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAH 160 (677)
Q Consensus 83 ~l~~~~~~f~~~~~~p--~~~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h 160 (677)
++++.+++|+++ +.| .+.|+.+.+|+++|+.|++.||+++.+|++|||.|++..+++.++|++++.|+++++.+..|
T Consensus 11 ~l~~~~~~~~~~-~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~ 89 (394)
T 2rfq_A 11 EVMQRLDALLPT-LRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSII 89 (394)
T ss_dssp HHHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHH
Confidence 567777788765 333 34567789999999999999999999999999999999999999999999999998877776
Q ss_pred hhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEE
Q psy2177 161 QSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTV 240 (677)
Q Consensus 161 ~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV 240 (677)
. ++...|..+|+++||++|+| +|+.+.|+++| | +|+|+++ |++|+|||+|+||||++.||+++|
T Consensus 90 ~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~--~~g~~lnG~K~~is~a~~Ad~~~v 153 (394)
T 2rfq_A 90 G-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVV--DGGYTVNGAWAWSSGCDHASWAVL 153 (394)
T ss_dssp H-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEE--TTEEEEEEEEEEETTGGGCSEEEE
T ss_pred H-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEe--CCeEEEeeeEeccCCCcccceEEE
Confidence 4 45677888999999999999 79999999998 4 6889884 456999999999999999999999
Q ss_pred EEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCCCCCCceEEEEcceecccccccCC--------Cc----ch
Q psy2177 241 FAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGIKASNTAEVYYEDVKVPVENVLGG--------VG----NG 308 (677)
Q Consensus 241 ~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~--------~g----~G 308 (677)
+|+++. +|. .+++++|+||++ ||++.+.|+++|++++++++|.||||+||.+++||. +| +|
T Consensus 154 ~a~~~~----~g~-~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g 226 (394)
T 2rfq_A 154 GGPVIK----DGR-PVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTA 226 (394)
T ss_dssp EEEEEE----TTE-EEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCC
T ss_pred eeeecC----CCC-CCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCC
Confidence 999831 121 247999999997 999999999999999999999999999999999975 33 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Q psy2177 309 FKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRV---QFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMD- 384 (677)
Q Consensus 309 ~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~---qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d- 384 (677)
+...+..++..|+.+++.++|+++++++.+++|+++|+ |||+||+++|.+|++|++|.+++++++++++.+++.+|
T Consensus 227 ~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~ 306 (394)
T 2rfq_A 227 PVYKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYA 306 (394)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566678899999999999999999999999999999 99999999999999999999999999999999999998
Q ss_pred ---CCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccC
Q psy2177 385 ---NGSQ---DYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLN 458 (677)
Q Consensus 385 ---~~~~---~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (677)
.+.. +...+++++|.++++.+.++++.++|++||.||+. +
T Consensus 307 ~~~~g~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~-------------~--------------------- 352 (394)
T 2rfq_A 307 LLVAGEEVPFELRLRARRDQVRATGRAISSIDKLFESSGATALAN-------------G--------------------- 352 (394)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT-------------T---------------------
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhc-------------C---------------------
Confidence 6543 23567899999999999999999999999999999 8
Q ss_pred CCCCCChhhhhhhhhhhhhhhhcCCccccccC-chHHhhhc
Q psy2177 459 TNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDE-VNDPLKND 498 (677)
Q Consensus 459 ~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eG-tn~i~~~~ 498 (677)
+|++|+||| ++ +..|++| ++++++..
T Consensus 353 ----~~l~r~~Rd-----a~-----~~~~~~g~~~~~~~~~ 379 (394)
T 2rfq_A 353 ----TPLQRFWRD-----AH-----AGRVHAANDPERAYVM 379 (394)
T ss_dssp ----CHHHHHHHH-----HH-----HHTTSGGGCHHHHHHH
T ss_pred ----CcHHHHHHH-----HH-----HHHcccccCchhHHHH
Confidence 999999999 99 9999999 99999988
No 36
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=1.5e-51 Score=477.99 Aligned_cols=501 Identities=16% Similarity=0.140 Sum_probs=371.1
Q ss_pred HHHHHHHHHHHHhhCCCcc-cCcCCCCCHHHHHHHHHcCCCCCCCcccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHh
Q psy2177 82 KMLVDPVTKFFDEVNDPLK-NDSLETVEPNTLEGLWDLGAFSLQVPQDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAH 160 (677)
Q Consensus 82 ~~l~~~~~~f~~~~~~p~~-~d~~~~~p~e~~~~l~~~Gl~~l~vP~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h 160 (677)
.++.+.+++|+++...... .+....++++.|+.|++.|+++. +|++|| ++..+...+.|+++ .+++ +.+|
T Consensus 32 ~~lr~~vr~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~-~p~e~G---~~~~~~~~v~e~~~---~~~~--~~~~ 102 (659)
T 1w07_A 32 FEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFK-RIIELR---LNEEEAGRLRHFID---QPAY--VDLH 102 (659)
T ss_dssp HHHHHHHHHHHHTCGGGCCTTTTSSCHHHHHHHHHHHHHHHHH-HHHHTT---CCHHHHHHHHHHHC---CCCH--HHHH
T ss_pred HHHHHHHHHHHhcCcccccCCccCCChHHHHHHHHHHHHHHHH-hHHHhC---CCchHHHHHHHHhc---cchh--hhhH
Confidence 5788999999987422211 12234567889999999888874 898998 35667777766663 3443 5677
Q ss_pred hhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCCCceEEEEcCCCCEEEEE-----EEEEeecC-ccc
Q psy2177 161 QSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGSIKTRAVLSPDGKHYILN-----GSKIWISN-GGF 234 (677)
Q Consensus 161 ~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~~~T~A~~~~dG~~y~Ln-----G~K~~isn-a~~ 234 (677)
..++...|..+|+++||++|||++++|++++|+|+|||++|||+.+++|+|+++++|++|+|| |+|+|||| +..
T Consensus 103 ~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~ 182 (659)
T 1w07_A 103 WGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKV 182 (659)
T ss_dssp HHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTT
T ss_pred HhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCC
Confidence 666677888999999999999999999999999999999999999999999998767789999 99999999 789
Q ss_pred cCEEEEEEEcCCCCCCCCcccCeEEEEEEe-cC------CCCeeeCCCCCcCC---CCCCCceEEEEcceecccccccCC
Q psy2177 235 AEIMTVFAQTPVKDEKTGKVVDKVTAFIVE-RS------FGGVTSGPPEKKMG---IKASNTAEVYYEDVKVPVENVLGG 304 (677)
Q Consensus 235 Ad~~lV~Art~~~d~~~g~~~~gis~FlVp-~~------~~GV~v~~~~~~~G---~rg~~t~~v~fddV~VP~~~lLG~ 304 (677)
||+++|+|+++.. | +..|+++|+|| ++ .|||++++.|+++| ++++++++|.|+||+||.+++||.
T Consensus 183 Ad~~lV~Ar~~~~----~-~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~ 257 (659)
T 1w07_A 183 STHAVVYARLITN----G-KDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMR 257 (659)
T ss_dssp CSEEEEEEEEEET----T-EEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCS
T ss_pred CCEEEEEEEECCC----C-CCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCC
Confidence 9999999998531 2 23589999999 45 69999999999999 999999999999999999999996
Q ss_pred ------CcchH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-------CCCCcHHHHHHHHHH
Q psy2177 305 ------VGNGF------KVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGR-------RIDSFGTIQEKLARM 365 (677)
Q Consensus 305 ------~g~G~------~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~-------pi~~~~~vq~~La~m 365 (677)
+|.|+ +..+..++.+|+.+++.++|+++++++.+++|+++|+|||+ ||+++|.+|++|++|
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~ 337 (659)
T 1w07_A 258 LSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPL 337 (659)
T ss_dssp SEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHH
T ss_pred cCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHH
Confidence 66654 35667788999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh-------hCCCC----chHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHH
Q psy2177 366 ALLHYVTESLAYMISGNM-------DNGSQ----DYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVK 434 (677)
Q Consensus 366 ~~~~~aa~al~~~~a~~~-------d~~~~----~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~ 434 (677)
.+++++++++++.++..+ +.+.. +...+++++|.++++.+.+++++|+|+|||+||+.
T Consensus 338 ~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~----------- 406 (659)
T 1w07_A 338 LASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLW----------- 406 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBG-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc-----------
Confidence 999999999999988765 33332 35678999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCccccccCchHHhhhccCCCcchhHHHHHHHH
Q psy2177 435 AKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPVTKFFDEVNDPLKNDSLETVEPNTLEGIQYA 514 (677)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi~~i~eGtn~i~~~~~~~~~~~ia~~~l~~~ 514 (677)
+ ++++|+||| ++ +..+++|+|+|++.. ++...+..
T Consensus 407 --~-------------------------~~l~r~~rd-----a~-----~~~~~eG~~~v~~~~-------iar~lL~~- 441 (659)
T 1w07_A 407 --C-------------------------SGLPELFAV-----YV-----PACTYEGDNVVLQLQ-------VARFLMKT- 441 (659)
T ss_dssp --G-------------------------GSHHHHHHH-----HG-----GGGTTTSCHHHHHHH-------HHHHHHHH-
T ss_pred --c-------------------------cCHHHHHHh-----cc-----eeEEEeCChHHHHHH-------HHHHHHHH-
Confidence 8 999999999 99 999999999999998 77544432
Q ss_pred hhhHHHHHHHhc--CCCCchhHHHHHHHHHHHHHhcCCCCCCC---ccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy2177 515 GGHLRELQKAFK--NPTAHLGLIIGEVKKRGLKSIGLSTPPSL---HHVVHANLAESGVLCSKSVVLFGEAVESLLLKYG 589 (677)
Q Consensus 515 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 589 (677)
..+.++ .+.+...++... ....... ..+ .+... .+.....+++...++...+..-+.+..
T Consensus 442 ------~~~~~~~~~~~~~~~~l~~~-----~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (659)
T 1w07_A 442 ------VAQLGSGKVPVGTTAYMGRA-----AHLLQCR--SGVQKAEDWLN--PDVVLEAFEARALRMAVTCAKNLSKFE 506 (659)
T ss_dssp ------HTTTTTSCCCCGGGGGGGGH-----HHHTSCC--CCCCSGGGGGC--HHHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred ------HHHHhcCCCCccHHHHHHhh-----hhhhccc--cccCchhhcCC--HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 222221 122222222111 1111111 111 11111 222333333333333322212221111
Q ss_pred cc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q psy2177 590 KG---VVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLP-SASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSYT 665 (677)
Q Consensus 590 ~~---~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~-~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 665 (677)
.. .-.-+..+.+++.+-++.|.+..-+.+.. . .+ ..+....|.++...-+...|.+.+..+..+.+++..
T Consensus 507 ~~~~~~n~~~~~~~~~a~a~~~~~~~~~f~~~~~----~-~~~~~~~~~~l~~l~~l~~l~~i~~~~~~~l~~~~~s~~- 580 (659)
T 1w07_A 507 NQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLE----Q-DIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPK- 580 (659)
T ss_dssp SHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTT----S-CCCSTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTSSCHH-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-cCCChHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCCCHH-
Confidence 10 01114455667777777776666555432 1 22 333445677777778888888888888887777654
Q ss_pred HHHHHHHH
Q psy2177 666 KLGDIAKN 673 (677)
Q Consensus 666 ~~~~~~~~ 673 (677)
..+.|-+.
T Consensus 581 ~~~~~~~~ 588 (659)
T 1w07_A 581 QASLANDQ 588 (659)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=3e-48 Score=449.99 Aligned_cols=466 Identities=17% Similarity=0.154 Sum_probs=332.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHhccCchhHHHHHHhhhhHHHHHHhcCChhhhhccccccccCCccccccccCCCCCCCCCC
Q psy2177 127 QDLGGLGLTNTQYARMVEIVGGNDLAVGIVLGAHQSIGFKGILLVGNPEQKAKYLPRVSTGKEFAAFCLTEPASGSDAGS 206 (677)
Q Consensus 127 ~eyGG~Gls~~~~~~v~e~la~~d~s~~~~l~~h~~~g~~~i~~~Gt~eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~~~ 206 (677)
++|||.+ ...... .+++... +++..+.+|.+++...|..+||++||++|||++.+|++++|||+|||++|||+.+
T Consensus 75 ~~~~~~~--~~~~~~-~~~~~~~--~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~ 149 (661)
T 2ddh_A 75 REYGISD--PEEIMW-FKNSVHR--GHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRG 149 (661)
T ss_dssp HHTTCCC--HHHHHH-HHHHHHT--TCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGG
T ss_pred HHcCCCC--chHHHH-HHHHhcc--chhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCccc
Confidence 7788876 333322 5555433 2344566777777788999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCCEEEEE-----EEEEeecC-ccccCEEEEEEEcCCCCCCCCcccCeEEEEEEe-cC------CCCeeeC
Q psy2177 207 IKTRAVLSPDGKHYILN-----GSKIWISN-GGFAEIMTVFAQTPVKDEKTGKVVDKVTAFIVE-RS------FGGVTSG 273 (677)
Q Consensus 207 ~~T~A~~~~dG~~y~Ln-----G~K~~isn-a~~Ad~~lV~Art~~~d~~~g~~~~gis~FlVp-~~------~~GV~v~ 273 (677)
++|+|+++++|++|+|| |+|+|||| +..||+++|+|++... | +..|+++|+|| ++ .|||+++
T Consensus 150 l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~----~-~~~G~~~FlVp~rd~~~~~~~pGV~v~ 224 (661)
T 2ddh_A 150 LETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQ----G-ECYGLHAFVVPIREIGTHKPLPGITVG 224 (661)
T ss_dssp CCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEET----T-EEEEEEEEEEECBCTTTCCBCTTEEEE
T ss_pred ceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccC----C-CCCceEEEEEecccccCCCCCCCeEEe
Confidence 99999998767789999 99999999 7799999999998531 2 23589999999 45 7999999
Q ss_pred CCCCcCCCCCCCceEEEEcceecccccccCCC------cch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2177 274 PPEKKMGIKASNTAEVYYEDVKVPVENVLGGV------GNG-----FKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHA 342 (677)
Q Consensus 274 ~~~~~~G~rg~~t~~v~fddV~VP~~~lLG~~------g~G-----~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a 342 (677)
+.|+++|++++++++|.|+||+||.+++||.. |.+ +...+..+..+|+.+++.++|+++++++.+++|+
T Consensus 225 ~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya 304 (661)
T 2ddh_A 225 DIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYS 304 (661)
T ss_dssp ECCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999974 433 6788888899999999999999999999999999
Q ss_pred hhhcccCC-------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-------CCC----chHHHHHHHHHHHHHH
Q psy2177 343 TQRVQFGR-------RIDSFGTIQEKLARMALLHYVTESLAYMISGNMDN-------GSQ----DYHLEAAISKVFASEA 404 (677)
Q Consensus 343 ~~R~qfg~-------pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~-------~~~----~~~~~~a~aK~~ase~ 404 (677)
++|+|||+ ||+++|.+|++|++|.+++++++++++.++..++. +.. +.+.+++++|.++++.
T Consensus 305 ~~R~qfg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~ 384 (661)
T 2ddh_A 305 AVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWT 384 (661)
T ss_dssp HHCBCSCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred hhCcccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999988753 321 3467899999999999
Q ss_pred HHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhcccCCCCCCChhhhhhhhhhhhhhhhcCCc
Q psy2177 405 AWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRGQLNTNQVFPYPEVLTEDQSDTLKMLVDPV 484 (677)
Q Consensus 405 a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ler~~RD~~~~~ar~~~~pi 484 (677)
+.+++++|+|+|||+||+. + ++++|+||| ++ +
T Consensus 385 a~~~~~~a~q~~GG~G~~~-------------~-------------------------~~l~r~~rd-----a~-----~ 416 (661)
T 2ddh_A 385 ANAGIEECRMACGGHGYSH-------------S-------------------------SGIPNIYVT-----FT-----P 416 (661)
T ss_dssp HHHHHHHHHHHTTHHHHSG-------------G-------------------------GSHHHHHHH-----HG-----G
T ss_pred HHHHHHHHHHHhCcccccc-------------c-------------------------CcHHHHHHh-----cc-----e
Confidence 9999999999999999999 8 999999999 99 9
Q ss_pred cccccCchHHhhhccCCCcchhHHHHHHHHhhhHHHHHHHhcC-C-CCchhHHHHHHHHHHHHHhcCCC-CCCCccccCc
Q psy2177 485 TKFFDEVNDPLKNDSLETVEPNTLEGIQYAGGHLRELQKAFKN-P-TAHLGLIIGEVKKRGLKSIGLST-PPSLHHVVHA 561 (677)
Q Consensus 485 ~~i~eGtn~i~~~~~~~~~~~ia~~~l~~~~~~l~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~ 561 (677)
..++||+|+|++.. ++...+... .+..+. | .+...++.. ......+. .... .....+...
T Consensus 417 ~~~~eG~~~vl~~~-------iar~lL~~~-------~~~~~~~~~~~~~~~l~~-~~~~~~~~-~~~~~~~~~~~~~~- 479 (661)
T 2ddh_A 417 ACTFEGENTVMMLQ-------TARFLMKIY-------DQVRSGKLVGGMVSYLND-LPSQRIQP-QQVAVWPTMVDINS- 479 (661)
T ss_dssp GGTSSSCHHHHHHH-------HHHHHHHHH-------HHHHHTCCCCGGGGGGGG-CCC---------------CCTTS-
T ss_pred eeEecCchHHHHHH-------HHHHHHHHH-------HHhhcCCCCchHHHHHHh-hhhhhccc-cccccccchhhhCC-
Confidence 99999999999999 776544322 222111 1 111111110 00000000 0000 000001111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH---HHhccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q psy2177 562 NLAESGVLCSKSVVLFGEAVESLL---LKYGKG----VVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQ 634 (677)
Q Consensus 562 ~l~~~~~~~~~~~~~~~~~~~~~l---~~~g~~----~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~ 634 (677)
.+.....+++...++...+..-+ .+.|.. .-.-+..+.+++.+-++.|.+.+-+....+ .+..+...
T Consensus 480 -~~~~~~~~~~r~~~~~~~~~~~~~~~~~~g~~~~~a~n~~~~~~~~~a~a~~~~~~~~~f~~~~~~-----~~~~~~~~ 553 (661)
T 2ddh_A 480 -LEGLTEAYKLRAARLVEIAAKNLQTHVSHRKSKEVAWNLTSVDLVRASEAHCHYVVVKVFSDKLPK-----IQDKAVQA 553 (661)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHGGG-----CSSHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCChhHHH
Confidence 12222333333222221111111 112222 112245566677777777776666654431 23334445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHh
Q psy2177 635 LLAELWCYEAAERVSQNLGALNSGKKLDSYTKLGDIAKNE 674 (677)
Q Consensus 635 ~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 674 (677)
.|.+++..-+...|.+.+..+..+.+++. +..+.|-..|
T Consensus 554 ~L~~l~~L~~l~~i~~~~~~~l~~~~~s~-~~~~~~~~~~ 592 (661)
T 2ddh_A 554 VLRNLCLLYSLYGISQKGGDFLEGSIITG-AQLSQVNARI 592 (661)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTSSCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCH-HHHHHHHHHH
Confidence 67777777888888888888888777765 3444444433
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=8.1e-38 Score=350.91 Aligned_cols=272 Identities=15% Similarity=0.117 Sum_probs=228.4
Q ss_pred HHhcCC--hhhhhccccccccCCccccccccCCCCC--------CCC-CCCceEEEEcCCCCEEEEEEEEEeecCccccC
Q psy2177 168 ILLVGN--PEQKAKYLPRVSTGKEFAAFCLTEPASG--------SDA-GSIKTRAVLSPDGKHYILNGSKIWISNGGFAE 236 (677)
Q Consensus 168 i~~~Gt--~eqk~~yLp~l~~Ge~~~a~alTEp~~G--------SD~-~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad 236 (677)
+..||| +|||++|||++++|++++|+|+|||++| ||+ ..++ +|++ +|++|+|||+|+|+||++.||
T Consensus 120 ~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r--~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 120 DQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEK--REDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEE--CSSEEEEEEEECSCTTCTTCS
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEE--ECCEEEEEeEEEEeeCCcccC
Confidence 347999 9999999999999999999999999874 785 3444 7776 667799999999999999999
Q ss_pred EEEEEEEcCCCCCCCCcccCeEEEEEEecCCCCeee---CCCCCc----------CCC-CC-CCceEEEEcceecccccc
Q psy2177 237 IMTVFAQTPVKDEKTGKVVDKVTAFIVERSFGGVTS---GPPEKK----------MGI-KA-SNTAEVYYEDVKVPVENV 301 (677)
Q Consensus 237 ~~lV~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v---~~~~~~----------~G~-rg-~~t~~v~fddV~VP~~~l 301 (677)
+++|+|+|+.. + +. .+++++|+||+++|||++ .+.+++ +|. +. .++++|+||||+||.+++
T Consensus 197 ~~iV~art~~~-~--~~-~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~v 272 (490)
T 1u8v_A 197 EHIIMPTIAMT-E--AD-KDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRI 272 (490)
T ss_dssp EEEECCSSCCC-G--GG-GGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGE
T ss_pred EEEEEEecCCC-C--CC-CCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHc
Confidence 99999998521 1 11 135899999999999999 445554 777 74 678999999999999999
Q ss_pred c--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2177 302 L--GGVGNGFKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMI 379 (677)
Q Consensus 302 L--G~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~ 379 (677)
| |+++.|+..++..++..|+.++++++|.+..++..+..... .|| |+++|.||++||+|.+.+++++++++.+
T Consensus 273 l~~g~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~---~~g--i~~~q~vq~~laem~~~leaar~l~~~a 347 (490)
T 1u8v_A 273 FLCQEYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAAD---YNG--AQKASHVKDKLIEMTHLNETLYCCGIAC 347 (490)
T ss_dssp EEESCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC--chhcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 88899999888888899988887777777766666655442 244 8999999999999999999999999999
Q ss_pred HHhhhC---CC-CchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHHHhhhhhHHHhhhhhc
Q psy2177 380 SGNMDN---GS-QDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQKAAKESQSFTMNMFRG 455 (677)
Q Consensus 380 a~~~d~---~~-~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (677)
++.+|. +. .+...+++++|+++++.+.++++.++|++||.|++
T Consensus 348 a~~~d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--------------------------------- 394 (490)
T 1u8v_A 348 SAEGYPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT--------------------------------- 394 (490)
T ss_dssp HHTCEECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH---------------------------------
T ss_pred HHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc---------------------------------
Confidence 999874 32 13467899999999999999999999999998873
Q ss_pred ccCCCCCCChhhhhhhhhhhhh-hhhcCCccccccCchHHhhhccCC
Q psy2177 456 QLNTNQVFPYPEVLTEDQSDTL-KMLVDPVTKFFDEVNDPLKNDSLE 501 (677)
Q Consensus 456 ~~~~~~~~~ler~~RD~~~~~a-r~~~~pi~~i~eGtn~i~~~~~~~ 501 (677)
+|++|.||| . | |++|+|+....++....+
T Consensus 395 -------~p~er~~rd-----~~~-----~~~~~~~~~~~l~~~~~g 424 (490)
T 1u8v_A 395 -------MPSEADFKS-----ETV-----VGRDGETIGDFCNKFFAA 424 (490)
T ss_dssp -------CCCHHHHTC-----CCB-----CSTTSCBHHHHHHHHTCC
T ss_pred -------ChHHHHHhC-----chh-----ccccchhHHHHHHHHhCC
Confidence 678999999 8 8 999999999999887444
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=2e-37 Score=347.12 Aligned_cols=239 Identities=18% Similarity=0.149 Sum_probs=203.6
Q ss_pred ChhhhhccccccccCCccccccccCCCCC--------CCCCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEc
Q psy2177 173 NPEQKAKYLPRVSTGKEFAAFCLTEPASG--------SDAGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQT 244 (677)
Q Consensus 173 t~eqk~~yLp~l~~Ge~~~a~alTEp~~G--------SD~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art 244 (677)
.+|||++|||++++|++++|+|+|||++| ||+. +.|+++. .+|++|+|||+|+|||| +.||+++|+|+|
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~-~~gdg~VlnG~K~~iT~-~~Ad~~iV~art 198 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVK-QTEKGIVVRGARMTATF-PLADEVLIFPSI 198 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEE-ECSSEEEEEEEEEEEEC-CCSSEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEE-EECCEEEEEeEEEEecc-ccccEEEEEEec
Confidence 46999999999999999999999999986 6775 6676652 26778999999999999 999999999998
Q ss_pred CCCCCCCCcccCeEEEEEEecCCCCeeeC--CCCC--------cCCCCC-CCceEEEEcceeccccccc--CCCcchHHH
Q psy2177 245 PVKDEKTGKVVDKVTAFIVERSFGGVTSG--PPEK--------KMGIKA-SNTAEVYYEDVKVPVENVL--GGVGNGFKV 311 (677)
Q Consensus 245 ~~~d~~~g~~~~gis~FlVp~~~~GV~v~--~~~~--------~~G~rg-~~t~~v~fddV~VP~~~lL--G~~g~G~~~ 311 (677)
+.. + +. .+++++|+||+++|||++. +.++ ++|.++ .++++|.||||+||.+|+| |+++.|+..
T Consensus 199 ~~~-~--~~-~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~ 274 (481)
T 2yyk_A 199 LLQ-A--GS-EKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNA 274 (481)
T ss_dssp CCC-T--TC-GGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHH
T ss_pred CCC-C--CC-CCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHH
Confidence 521 1 11 2468999999999999994 4433 367775 7889999999999999998 788777766
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC---C
Q psy2177 312 A--MQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDN---G 386 (677)
Q Consensus 312 ~--~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~---~ 386 (677)
+ +..++.+|+..++..+|.+..++..+..++.. || |+++|.||++||+|.+.+++++++++.+++.+|. +
T Consensus 275 ~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~g--i~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G 349 (481)
T 2yyk_A 275 YGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---IG--ADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYG 349 (481)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT--GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTS
T ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccC
Confidence 5 67789999999999999999999999888864 44 9999999999999999999999999999999874 3
Q ss_pred C-CchHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccc
Q psy2177 387 S-QDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLL 423 (677)
Q Consensus 387 ~-~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~ 423 (677)
. .+...+++++|+++++.+.++++.++|++||.|+..
T Consensus 350 ~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~~ 387 (481)
T 2yyk_A 350 LLVPDRGALDGARNLYPRLYPRIREILEQIGASGLITL 387 (481)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCC
T ss_pred CcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccC
Confidence 2 134678999999999999999999999999977654
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=8.2e-34 Score=318.78 Aligned_cols=259 Identities=13% Similarity=0.163 Sum_probs=204.5
Q ss_pred cCC--hhhhhccccccccCCccccccccCCCC--------CCCCCCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEE
Q psy2177 171 VGN--PEQKAKYLPRVSTGKEFAAFCLTEPAS--------GSDAGSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTV 240 (677)
Q Consensus 171 ~Gt--~eqk~~yLp~l~~Ge~~~a~alTEp~~--------GSD~~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV 240 (677)
+|+ .+||++|||++++|+++.++|+|||++ |||+ .++|++ . +|++|+|||+|+||||++.||+++|
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~~~-~--~gdg~VlnG~K~~iT~a~~Ad~~lV 202 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRIVE-K--TDDGIIVNGVKAVGTGIAFGDYMHI 202 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEEEE-E--CSSEEEEEEEEEEEESGGGCSEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEEEE-E--ECCEEEEEEEEEEECCccccCEEEE
Confidence 555 578899999999999999999999987 5888 555443 2 5677999999999999999999999
Q ss_pred EEEcCCCCCCCCcccCeEEEEEEecCCCCeeeCCCCCcCCC-----CC-----CCceEEEEcceeccccccc--CCCcch
Q psy2177 241 FAQTPVKDEKTGKVVDKVTAFIVERSFGGVTSGPPEKKMGI-----KA-----SNTAEVYYEDVKVPVENVL--GGVGNG 308 (677)
Q Consensus 241 ~Art~~~d~~~g~~~~gis~FlVp~~~~GV~v~~~~~~~G~-----rg-----~~t~~v~fddV~VP~~~lL--G~~g~G 308 (677)
+|++... ..+ +++++|+||+++|||++...+.++|. +. ..+++|+||||+||.+++| |+++.|
T Consensus 203 ~a~t~~~--~~~---~~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g 277 (515)
T 3hwc_A 203 GCLYRPG--IPG---EQVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHA 277 (515)
T ss_dssp CCCCCTT--CCG---GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGG
T ss_pred EEEecCC--CCC---CeEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHH
Confidence 9997311 111 23899999999999999877777663 22 3378999999999999999 899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC---
Q psy2177 309 FKVAMQILNNGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDN--- 385 (677)
Q Consensus 309 ~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~--- 385 (677)
+..++..+...+....+..+|.+..++..+..++. .|| |+++|.||++||+|.+.+++++++++.+++..|.
T Consensus 278 ~~~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--I~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~ 352 (515)
T 3hwc_A 278 KLYPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HIG--TSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKG 352 (515)
T ss_dssp GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 98776555555422224455556656655555443 245 9999999999999999999999999999998875
Q ss_pred CC-CchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHhHHHHH--HhhhhhHHHhhhhhcc
Q psy2177 386 GS-QDYHLEAAISKVFASEAAWYVTDEAIQILGGINLLLGRLASASAAVKAKEEQK--AAKESQSFTMNMFRGQ 456 (677)
Q Consensus 386 ~~-~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 456 (677)
+. .+...+++++|+++++.+.++++.++|++||.+++. +.++ ..++.+.+..+|++|.
T Consensus 353 G~~~p~~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~-------------Ps~~d~~~pe~~~~l~ky~~g~ 413 (515)
T 3hwc_A 353 GRYKPNPLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMI-------------PSEGQWDDSQSGQWFVKLNNGP 413 (515)
T ss_dssp CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSC-------------CCHHHHHCTTTHHHHHHHTCCT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeC-------------CCHHHhcCchhHHHHHHHhCCC
Confidence 32 234678999999999999999999999999999998 3222 2566777777888875
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.95 E-value=2.6e-26 Score=258.22 Aligned_cols=238 Identities=13% Similarity=0.106 Sum_probs=190.7
Q ss_pred hhhhccccccccCCccccccccCCCCCCCC-----CCCceEEEEcCCCCEEEEEEEEEeecCccccCEEEEEEEcCCCCC
Q psy2177 175 EQKAKYLPRVSTGKEFAAFCLTEPASGSDA-----GSIKTRAVLSPDGKHYILNGSKIWISNGGFAEIMTVFAQTPVKDE 249 (677)
Q Consensus 175 eqk~~yLp~l~~Ge~~~a~alTEp~~GSD~-----~~~~T~A~~~~dG~~y~LnG~K~~isna~~Ad~~lV~Art~~~d~ 249 (677)
+-..+|+..+..+++..+.++|+|...-.. ..+-...+. ++++||+|||.|.|+||++.||+++|++++...
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve-~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~-- 210 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIE-KNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPG-- 210 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEE-ECSSEEEEEEEEEEEESGGGCSEEEECCCCCTT--
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEE-EcCCeEEEeeEehhhcCccccCEEEEEeecCCC--
Confidence 345679999999999999999999853221 111122222 234459999999999999999999999987422
Q ss_pred CCCcccCeEEEEEEecCCCCeeeC---------CCCCcCCCCCCC-ceEEEEcceeccccccc--CCCcchHHHHHHHHH
Q psy2177 250 KTGKVVDKVTAFIVERSFGGVTSG---------PPEKKMGIKASN-TAEVYYEDVKVPVENVL--GGVGNGFKVAMQILN 317 (677)
Q Consensus 250 ~~g~~~~gis~FlVp~~~~GV~v~---------~~~~~~G~rg~~-t~~v~fddV~VP~~~lL--G~~g~G~~~~~~~l~ 317 (677)
.+.+++++|+||+++|||++. +...+++.++.. ++.|+||||+||.++++ |+++.|+...+..++
T Consensus 211 ---~~~d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~ 287 (517)
T 4g5e_A 211 ---IPGDQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFD 287 (517)
T ss_dssp ---CCGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHH
T ss_pred ---CCccceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHH
Confidence 123578899999999999983 334455555544 48899999999999987 899999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC---CC-CchHHH
Q psy2177 318 NGRFGMAAALAGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDN---GS-QDYHLE 393 (677)
Q Consensus 318 ~~Rl~~aa~~~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~---~~-~~~~~~ 393 (677)
..|+..++..+|.+..++..+..++.. +| |.++|.||++|++|.+.+++++++++.++..... +. .+....
T Consensus 288 ~~~~~~~~~~~~~~~~~~g~a~~~ae~---~G--i~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~ 362 (517)
T 4g5e_A 288 WLHYHALIRQSVRAELMAGLAILITEH---IG--TNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILI 362 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---hC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHH
Confidence 999998888999999999988888864 34 8999999999999999999999999988765332 21 233678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccc
Q psy2177 394 AAISKVFASEAAWYVTDEAIQILGGINLLL 423 (677)
Q Consensus 394 ~a~aK~~ase~a~~v~~~a~qi~GG~G~~~ 423 (677)
++++|.++++...+++++++|++||.|++.
T Consensus 363 a~~aK~~a~~~~~rv~~eaiqi~GG~g~~~ 392 (517)
T 4g5e_A 363 YDFGRALYLENFSQMIYELVDLSGRSALIF 392 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 999999999999999999999999999997
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=90.98 E-value=1.2 Score=50.58 Aligned_cols=92 Identities=18% Similarity=0.225 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-CCCchHHHHHHHHHHHHHHHH
Q psy2177 328 AGTMRSVTKKAVDHATQRVQFGRRIDSFGTIQEKLARMALLHYVTESLAYMISGNMDN-GSQDYHLEAAISKVFASEAAW 406 (677)
Q Consensus 328 ~G~a~~al~~a~~~a~~R~qfg~pi~~~~~vq~~La~m~~~~~aa~al~~~~a~~~d~-~~~~~~~~~a~aK~~ase~a~ 406 (677)
+..++..+..+.+++.+| +|+.|.+.|.+..+||+|.+++|++++.+.++...... +.+....+..++++|+.+...
T Consensus 464 ~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
T 3owa_A 464 VNNAKKIGLMVAGLAAQK--YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFN 541 (597)
T ss_dssp HHHHHHHHHHHHHHHHHH--HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHH
Confidence 334444455555555544 46889999999999999999999999999999888775 655567889999999999999
Q ss_pred HHHHHHHHHhCCccccc
Q psy2177 407 YVTDEAIQILGGINLLL 423 (677)
Q Consensus 407 ~v~~~a~qi~GG~G~~~ 423 (677)
++-..+.+++ ..+.+
T Consensus 542 ~~~~~~~~~~--~~~~~ 556 (597)
T 3owa_A 542 EIEAHAKETL--IAVEN 556 (597)
T ss_dssp HHHHHHHHHH--HHHCC
T ss_pred HHHHHHHHHH--Hhhcc
Confidence 9999999988 55555
No 43
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=89.10 E-value=2.6 Score=44.97 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=64.9
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++.+.+.++-+.+.++.+.+..|.+....+..++..+|.++..++-..+-++..+....
T Consensus 283 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~ 357 (393)
T 1rx0_A 283 FGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYL 357 (393)
T ss_dssp TTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGB
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 577888999999999999999999999999999988877666677889999999999999998888887664333
No 44
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=89.04 E-value=3.3 Score=44.29 Aligned_cols=83 Identities=18% Similarity=0.105 Sum_probs=70.0
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSYTKL 667 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 667 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+....+..++..||.++..++-..+-++..+.....+..+
T Consensus 292 fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~ 371 (403)
T 3p4t_A 292 FGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVANQAVQLFGGMGYMAESEV 371 (403)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHH
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhChhhccCCCcH
Confidence 47888899999999999999999999999999999888876657889999999999999999999998877555444444
Q ss_pred HHH
Q psy2177 668 GDI 670 (677)
Q Consensus 668 ~~~ 670 (677)
.+.
T Consensus 372 ~r~ 374 (403)
T 3p4t_A 372 ERQ 374 (403)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 45
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=88.29 E-value=3.2 Score=45.04 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=65.3
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSY 664 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~ 664 (677)
+|+.+.+.|.+..+|+++.+++.++-+.+.|+.+.+..|.+ ...+..++..||.++..++-..+-++..+.....+
T Consensus 316 fG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~-~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e 391 (436)
T 2ix5_A 316 FGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQM-TPGQASLGKAWISSKARETASLGRELLGGNGILAD 391 (436)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGG
T ss_pred CCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHhCccccccC
Confidence 57888899999999999999999999999999998887753 46778999999999999999999998876444433
No 46
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=87.88 E-value=4.2 Score=43.04 Aligned_cols=82 Identities=23% Similarity=0.204 Sum_probs=68.1
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSYTKL 667 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 667 (677)
+|+.+.+.|.+..||+++.+.+.++-+.+.++...+..|. ....+..++..+|.++..++-..+-++..+.....+.-+
T Consensus 277 fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~-~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~~~~~ 355 (385)
T 2pg0_A 277 FGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGK-QIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEI 355 (385)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSHH
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCcH
Confidence 5778889999999999999999999999999999888774 456788999999999999999999998876544444333
Q ss_pred HHH
Q psy2177 668 GDI 670 (677)
Q Consensus 668 ~~~ 670 (677)
.++
T Consensus 356 ~r~ 358 (385)
T 2pg0_A 356 ARR 358 (385)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 47
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=87.55 E-value=6.8 Score=41.61 Aligned_cols=83 Identities=11% Similarity=0.078 Sum_probs=69.9
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSYTKL 667 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 667 (677)
+|+.+.+.|.+..||+++.+.+.++-+.+.++.+.+..|.+ ...+..++..+|.++..++-..+-++..+.....+..+
T Consensus 283 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~ 361 (396)
T 3ii9_A 283 FGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTA-AVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGV 361 (396)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSCSGGGHH
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcH
Confidence 47889999999999999999999999999999998888844 45688999999999999999999999887666555444
Q ss_pred HHHH
Q psy2177 668 GDIA 671 (677)
Q Consensus 668 ~~~~ 671 (677)
.++-
T Consensus 362 ~r~~ 365 (396)
T 3ii9_A 362 ARHL 365 (396)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 48
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=86.75 E-value=4.9 Score=42.66 Aligned_cols=76 Identities=12% Similarity=0.084 Sum_probs=64.2
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSY 664 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~ 664 (677)
+|+.+.+.|.+..||+++..++.++-+.+.++.+.+..|.+ ...+..++..||.++..++-..+-++..+.....+
T Consensus 276 fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~-~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~ 351 (392)
T 1siq_A 276 FGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKA-APEMVSLLKRNNCGKALDIARQARDMLGGNGISDE 351 (392)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGG
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence 57788899999999999999999999999999998877754 45678899999999999999888888876444443
No 49
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=86.69 E-value=4.7 Score=42.79 Aligned_cols=74 Identities=22% Similarity=0.199 Sum_probs=64.2
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+ ...+..++..||.++..++-..+-++..+....
T Consensus 272 fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 345 (391)
T 2vig_A 272 FGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKP-FIKEAAMAKLAASEAATAISHQAIQILGGMGYV 345 (391)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHHHHHHhhCCeEec
Confidence 57778899999999999999999999999999999887765 467889999999999999999988888764333
No 50
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=86.57 E-value=3.5 Score=43.86 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=62.9
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..||+++...+.++-+.+.++.+.+..|.+....+..++..||.++..++-..+-++..+....
T Consensus 284 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 358 (393)
T 3pfd_A 284 FGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVTTDAVQLFGGYGYT 358 (393)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGB
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchhhcc
Confidence 577888999999999999999999999999999998888765667889999999999999999988888764443
No 51
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=86.45 E-value=5.3 Score=42.25 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=63.6
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.+|.+.+..|.+ ...+..++..+|.++..++-..+-++..+....
T Consensus 273 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~-~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~ 346 (385)
T 2eba_A 273 FGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKL-TPAQVSLAKRQNVWKALQAARMARDILGGSGIT 346 (385)
T ss_dssp SSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred CCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 57788899999999999999999999999999998887754 567888999999999999999888887664433
No 52
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=86.02 E-value=6.1 Score=42.12 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=68.6
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSYTKL 667 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 667 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++...+..|.+ ...+..++..||.++..++-..+-++..+.....+.-+
T Consensus 295 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~-~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~~~~~ 373 (403)
T 3r7k_A 295 FGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGED-VVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEI 373 (403)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHH
T ss_pred CCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-cHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecCCchH
Confidence 47788899999999999999999999999999999888755 45789999999999999999999999877555444444
Q ss_pred HHH
Q psy2177 668 GDI 670 (677)
Q Consensus 668 ~~~ 670 (677)
.++
T Consensus 374 ~r~ 376 (403)
T 3r7k_A 374 ERH 376 (403)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 53
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=85.78 E-value=5.5 Score=42.02 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=64.4
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDS 663 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~ 663 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+ ...+..++..+|.++..++-..+-++..+.....
T Consensus 275 fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~ 349 (383)
T 1buc_A 275 FGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKP-FTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSE 349 (383)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC
Confidence 57788889999999999999999999999999998887744 5678899999999999999999888887644433
No 54
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=85.26 E-value=7.3 Score=40.95 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=65.2
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSY 664 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~ 664 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+ ...+..++..||.++..++-..+-++..+.....+
T Consensus 264 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 339 (372)
T 2dvl_A 264 FGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGER-FTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRD 339 (372)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGG
T ss_pred cCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCC
Confidence 57788899999999999999999999999999998887754 56788999999999999999999888876444443
No 55
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=84.92 E-value=6.9 Score=41.27 Aligned_cols=74 Identities=16% Similarity=0.179 Sum_probs=63.8
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+ ...+..++..||.++..++-..+-++..+....
T Consensus 270 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 343 (379)
T 1ukw_A 270 FGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLP-HAHASAIAKAYASEIAFEAANQAIQIHGGYGYV 343 (379)
T ss_dssp SSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGS
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecC
Confidence 57788899999999999999999999999999998877754 457889999999999999999988887664433
No 56
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=84.72 E-value=6.2 Score=41.83 Aligned_cols=82 Identities=11% Similarity=0.087 Sum_probs=68.3
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHH
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSYTKL 667 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 667 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++...+..|......+..++..+|.++..++-..+-++..+.....+.-+
T Consensus 274 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~ 353 (397)
T 3mpi_A 274 FGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYSTEYPV 353 (397)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHH
T ss_pred cCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCCCH
Confidence 47788899999999999999999999999999998888745566789999999999999999988888877544444433
Q ss_pred HH
Q psy2177 668 GD 669 (677)
Q Consensus 668 ~~ 669 (677)
.+
T Consensus 354 ~r 355 (397)
T 3mpi_A 354 AR 355 (397)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 57
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=84.62 E-value=4.2 Score=42.77 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=59.9
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSY 664 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~ 664 (677)
+|+.+.+.|.+..+|+++.+++.++-+.+.++.+.+..|......+..++..||.++..++-..+-++..+.....+
T Consensus 254 fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 330 (366)
T 1r2j_A 254 FGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATAAQVLASAGAREG 330 (366)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--C
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCC
Confidence 56778899999999999999999999999999988876633456788999999999999999998888876444433
No 58
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=84.38 E-value=7 Score=41.77 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=63.5
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDS 663 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~ 663 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.+|.+.+..|.+ ...+..++..||.++..++-..+-++..+.....
T Consensus 294 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~ 368 (404)
T 2jif_A 294 FGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKP-FIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTK 368 (404)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred cCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHhcCcceecC
Confidence 57788899999999999999999999999999988877754 4567889999999999999998888887644333
No 59
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=84.22 E-value=11 Score=39.88 Aligned_cols=77 Identities=14% Similarity=0.008 Sum_probs=62.7
Q ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy2177 587 KYGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLN----KNLPSA---SHEQLLAELWCYEAAERVSQNLGALNSGK 659 (677)
Q Consensus 587 ~~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~----~~~~~~---~~e~~la~~~~~~~~~~~~~~~~~l~~~~ 659 (677)
.+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+. .|.+.. ..+..++..+|.++..++-..+-++..+.
T Consensus 268 ~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 347 (394)
T 2rfq_A 268 FAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFELRLRARRDQVRATGRAISSIDKLFESSGAT 347 (394)
T ss_dssp CTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh
Confidence 45778889999999999999999999999999998887 665532 23677888999999999998888887664
Q ss_pred CCCc
Q psy2177 660 KLDS 663 (677)
Q Consensus 660 ~~~~ 663 (677)
....
T Consensus 348 g~~~ 351 (394)
T 2rfq_A 348 ALAN 351 (394)
T ss_dssp GGBT
T ss_pred hhhc
Confidence 4433
No 60
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=84.22 E-value=7.1 Score=41.52 Aligned_cols=75 Identities=13% Similarity=0.094 Sum_probs=64.9
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDS 663 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~ 663 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++...+..|. ....+..++..||.++..++-..+-++..+.....
T Consensus 285 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~-~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~ 359 (399)
T 3swo_A 285 FDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEG-VRPEQISLGKLNNVREAIAIARECRTLLGGSGITL 359 (399)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBS
T ss_pred CCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccC
Confidence 4678889999999999999999999999999999988874 45678899999999999999999888887644433
No 61
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=83.98 E-value=7.8 Score=40.97 Aligned_cols=74 Identities=20% Similarity=0.196 Sum_probs=63.7
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.+|.+.+..|.+ ...+..++..+|.++..++-..+-++..+....
T Consensus 277 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 350 (387)
T 2d29_A 277 FGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRP-FTLEAAQAKLFASEAAVKACDEAIQILGGYGYV 350 (387)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGS
T ss_pred CCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHHHHHHhcCCeecC
Confidence 57788899999999999999999999999999998887754 457889999999999999999888888764333
No 62
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=83.51 E-value=3.1 Score=44.89 Aligned_cols=75 Identities=11% Similarity=0.165 Sum_probs=62.5
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK-NLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~-~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++..++.++-+.+.+|.+.+.. |.+....+..++..||.++..++-..+-++..+....
T Consensus 308 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~ 383 (428)
T 2wbi_A 308 FKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVS 383 (428)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGS
T ss_pred cCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 67788899999999999999999999999999888765 3233456788999999999999999988888764333
No 63
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=83.49 E-value=7.9 Score=41.27 Aligned_cols=75 Identities=11% Similarity=0.072 Sum_probs=64.6
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDS 663 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~ 663 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+ ...+..++..||.++..++-..+-++..+.....
T Consensus 290 fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~-~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~ 364 (403)
T 3sf6_A 290 FDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGEL-APEQVSLGKLNNVREAIEIARTARTVLGASGITG 364 (403)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGST
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHHHHHHhcCCeEccc
Confidence 46788899999999999999999999999999998888754 4678899999999999999999888887644433
No 64
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=83.39 E-value=8 Score=41.66 Aligned_cols=77 Identities=12% Similarity=0.091 Sum_probs=63.3
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPS---ASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSY 664 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~---~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~ 664 (677)
+|+.+.+.|.+..+|+++.+.+.++-+.+.+|.+.+..|.+. ...+..++..||.++..++-..+-++..+.....+
T Consensus 306 ~G~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~ 385 (439)
T 2c12_A 306 GSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKD 385 (439)
T ss_dssp SSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTT
T ss_pred CCeehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCC
Confidence 367788999999999999999999999999999888777543 22357789999999999999998888876444443
No 65
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=83.34 E-value=7 Score=41.52 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=64.7
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDSY 664 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~ 664 (677)
+|+.+.+.|.+..+|+++.+.+.++-+.+.++.+.+..|.+ ...+..++..||.++..++-..+-++..+.....+
T Consensus 284 fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~ 359 (396)
T 1egd_A 284 FGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRR-NTYYASIAKAFAGDIANQLATDAVQILGGNGFNTE 359 (396)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTBTT
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCC
Confidence 56778889999999999999999999999999998887753 45788999999999999999999888876444433
No 66
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=82.83 E-value=5.3 Score=45.45 Aligned_cols=72 Identities=14% Similarity=0.227 Sum_probs=63.3
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGK 659 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~ 659 (677)
+|+.|.+.|.+..+|+++...++++.+.+.++.+.+..|.+....+..++..||.+...++-...-++..+.
T Consensus 321 fG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~ 392 (607)
T 2uxw_A 321 FGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGM 392 (607)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred cCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 577899999999999999999999999999998888777666678899999999999999988888887653
No 67
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=82.25 E-value=5.3 Score=42.70 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=64.2
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKN-LPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDS 663 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~-~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~ 663 (677)
+|+.+.+.|.+..||+++.+.+.++-+.+.++.+.+..+ ......+..++..||.++..++-..+-++..+.....
T Consensus 300 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~ 376 (415)
T 4hr3_A 300 FGKPLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSN 376 (415)
T ss_dssp TTEEGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSS
T ss_pred CCCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 577888999999999999999999999999999888763 2345678899999999999999999998887644433
No 68
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=81.79 E-value=6.8 Score=41.57 Aligned_cols=74 Identities=11% Similarity=0.077 Sum_probs=63.5
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|.+ ...+..++..+|.++..++-..+-++..+....
T Consensus 283 fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~-~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~ 356 (394)
T 1ivh_A 283 FGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHC-TAKDCAGVILYSAECATQVALDGIQCFGGNGYI 356 (394)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGB
T ss_pred CCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-chHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 56778889999999999999999999999999998877753 467889999999999999999888888764333
No 69
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=80.97 E-value=6.4 Score=44.37 Aligned_cols=78 Identities=12% Similarity=0.159 Sum_probs=64.2
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------CCCchHHHHHHHHHHHHHHHHHHHHHHH
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKN-------------LPSASHEQLLAELWCYEAAERVSQNLGA 654 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~-------------~~~~~~e~~la~~~~~~~~~~~~~~~~~ 654 (677)
+|..|.+.|.+..+|+++...+|++-+.+.++...+..+ .+....+..++..||.+...++-..+-+
T Consensus 292 fg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~q 371 (577)
T 2z1q_A 292 FGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQ 371 (577)
T ss_dssp SSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577899999999999999999999999999998877654 2234467789999999999999999999
Q ss_pred hhcCCCCCcch
Q psy2177 655 LNSGKKLDSYT 665 (677)
Q Consensus 655 l~~~~~~~~~~ 665 (677)
+..+.....+.
T Consensus 372 i~GG~G~~~e~ 382 (577)
T 2z1q_A 372 IHGGYGYSQEY 382 (577)
T ss_dssp HHGGGGGBTTS
T ss_pred HhCCeeecCCC
Confidence 98875544443
No 70
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=80.87 E-value=7.7 Score=40.95 Aligned_cols=76 Identities=21% Similarity=0.190 Sum_probs=61.3
Q ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q psy2177 587 KYGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSASHEQLLAELWCYEAAERVSQNLGALNSGKKLDS 663 (677)
Q Consensus 587 ~~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~~ 663 (677)
.+|+.+.+.|.+..+|+++...+.++-+.+.++.+.+..|. ....+..++..||.++..++-..+-++..+.....
T Consensus 278 ~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~-~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~ 353 (387)
T 3nf4_A 278 AFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGR-PYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTR 353 (387)
T ss_dssp ----CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBT
T ss_pred eCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcC
Confidence 35778888899999999999999999999999999888874 45678899999999999999999888887644443
No 71
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=79.55 E-value=9.3 Score=40.93 Aligned_cols=77 Identities=10% Similarity=0.005 Sum_probs=63.2
Q ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy2177 587 KYGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLN----KNLPSA---SHEQLLAELWCYEAAERVSQNLGALNSGK 659 (677)
Q Consensus 587 ~~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~----~~~~~~---~~e~~la~~~~~~~~~~~~~~~~~l~~~~ 659 (677)
.+|+.+.+.|.+..+|+++.+.+.++-+.+.++.+.+. .|.+.. ..+..++..||.++..++-..+-++..+.
T Consensus 296 ~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~ 375 (422)
T 2jbr_A 296 YTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGAT 375 (422)
T ss_dssp TTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGG
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 45777889999999999999999999999999998887 665432 24678899999999999999888887764
Q ss_pred CCCc
Q psy2177 660 KLDS 663 (677)
Q Consensus 660 ~~~~ 663 (677)
....
T Consensus 376 g~~~ 379 (422)
T 2jbr_A 376 SFMD 379 (422)
T ss_dssp GGBT
T ss_pred hhhc
Confidence 4433
No 72
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=78.92 E-value=9.4 Score=40.74 Aligned_cols=73 Identities=15% Similarity=0.153 Sum_probs=61.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCc---hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy2177 589 GKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLN----KNLPSA---SHEQLLAELWCYEAAERVSQNLGALNSGKKL 661 (677)
Q Consensus 589 g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~----~~~~~~---~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~ 661 (677)
|+.+.+.|.+..+|+++.+.+.++-+.+.++.+.+. .|.+.. ..+..++..||.++..++-..+-++..+...
T Consensus 285 G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~ 364 (414)
T 2or0_A 285 GQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEITFEERAIGRRTQIAAAWRAVRAADEIFARAGGGAL 364 (414)
T ss_dssp SCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGG
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhh
Confidence 778889999999999999999999999999998887 665532 2467889999999999999988888766433
No 73
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=78.29 E-value=14 Score=39.69 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=63.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc--hHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q psy2177 590 KGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPSA--SHE-QLLAELWCYEAAERVSQNLGALNSGKKLDSYTK 666 (677)
Q Consensus 590 ~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~~--~~e-~~la~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 666 (677)
+.+.+.|.+..||+++...+.++-+.+.++.+.+..|.+.. ..+ ..++..||.++..++-..+-++..+.....+.-
T Consensus 305 ~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~ 384 (438)
T 3mkh_A 305 VPLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRP 384 (438)
T ss_dssp SCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSS
T ss_pred eeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCc
Confidence 77888999999999999999999999999999988876532 122 457999999999999999888887644444433
Q ss_pred HHH
Q psy2177 667 LGD 669 (677)
Q Consensus 667 ~~~ 669 (677)
+.+
T Consensus 385 l~r 387 (438)
T 3mkh_A 385 FSD 387 (438)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 74
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=72.66 E-value=21 Score=39.94 Aligned_cols=78 Identities=12% Similarity=0.118 Sum_probs=62.4
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 588 YGKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNKNLPS-----ASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 588 ~g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~~~~~-----~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+|+.+.+.|.+..+|+++..+++++.+.+.|+.+.+..+... ...+..++..||.+...++-..+-++..+....
T Consensus 327 fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~ 406 (541)
T 3djl_A 327 FGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEVLGGIGYC 406 (541)
T ss_dssp TTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGS
T ss_pred CCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec
Confidence 578899999999999999999999999999999988776321 123356889999999999988888888764444
Q ss_pred cch
Q psy2177 663 SYT 665 (677)
Q Consensus 663 ~~~ 665 (677)
.+.
T Consensus 407 ~e~ 409 (541)
T 3djl_A 407 EES 409 (541)
T ss_dssp TTS
T ss_pred CCC
Confidence 433
No 75
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=62.01 E-value=40 Score=38.57 Aligned_cols=74 Identities=14% Similarity=-0.042 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCC----chHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy2177 591 GVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSL-------NKNLPS----ASHEQLLAELWCYEAAERVSQNLGALNSGK 659 (677)
Q Consensus 591 ~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~-------~~~~~~----~~~e~~la~~~~~~~~~~~~~~~~~l~~~~ 659 (677)
.+.+.|.+..||+++...+|++.+.+.++.+.+ ..|.+. ...+...+..||.+...++-+.+.+++.+.
T Consensus 323 pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~ 402 (659)
T 1w07_A 323 QVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGH 402 (659)
T ss_dssp BGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 588899999999999999999999999887765 234332 245667899999999999999999988775
Q ss_pred CCCcc
Q psy2177 660 KLDSY 664 (677)
Q Consensus 660 ~~~~~ 664 (677)
....+
T Consensus 403 G~~~~ 407 (659)
T 1w07_A 403 GYLWC 407 (659)
T ss_dssp GGBGG
T ss_pred ccccc
Confidence 44433
No 76
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=59.85 E-value=55 Score=34.19 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=59.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCCc-----hHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy2177 589 GKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK------NLPSA-----SHEQLLAELWCYEAAERVSQNLGALNS 657 (677)
Q Consensus 589 g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~------~~~~~-----~~e~~la~~~~~~~~~~~~~~~~~l~~ 657 (677)
++.+.+.|.+..+|+++...+.++-+.+.++.+.+.. +.+.. ..+...+..+|.++..++-..+-++..
T Consensus 273 ~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~G 352 (395)
T 3mxl_A 273 GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLVG 352 (395)
T ss_dssp TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5677788999999999999999999999998877654 11111 134567788999988888888888877
Q ss_pred CCCCCcchHHHHH
Q psy2177 658 GKKLDSYTKLGDI 670 (677)
Q Consensus 658 ~~~~~~~~~~~~~ 670 (677)
+.....+..+.++
T Consensus 353 g~g~~~~~~~~r~ 365 (395)
T 3mxl_A 353 GLAYTAGHPLSRL 365 (395)
T ss_dssp GGGGBTTSHHHHH
T ss_pred hHhccCCCcHHHH
Confidence 6544444444433
No 77
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=51.71 E-value=44 Score=38.20 Aligned_cols=68 Identities=10% Similarity=-0.055 Sum_probs=53.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCC----chHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy2177 591 GVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLN-------KNLPS----ASHEQLLAELWCYEAAERVSQNLGALNSG 658 (677)
Q Consensus 591 ~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~-------~~~~~----~~~e~~la~~~~~~~~~~~~~~~~~l~~~ 658 (677)
.+.+.|.+..||+++...+|++.+.+.++.+.+. .|.+. ...+...+..+|.+...++-+.+.+++.+
T Consensus 320 ~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~~GG 398 (661)
T 2ddh_A 320 QILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGG 398 (661)
T ss_dssp BGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 6888999999999999999999999999988774 23321 23456788899999998888888888765
No 78
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=48.55 E-value=51 Score=36.61 Aligned_cols=71 Identities=11% Similarity=-0.059 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-CCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 592 VVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK---NL-PSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 592 ~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~---~~-~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+...|.+..+|+|+.+++-++-+.+.+|...... |. .....+..+|..||.++..+|-..+.+|..+-...
T Consensus 316 I~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~ 390 (515)
T 3hwc_A 316 TSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNPLIYDFGRAHFLQNQMSVMYELLDLAGRSSLM 390 (515)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTS
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeee
Confidence 7788999999999999999999999999877654 42 12346789999999999999999999888764443
No 79
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=45.41 E-value=64 Score=34.41 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=57.8
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCC--------chHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy2177 589 GKGVVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK---NLPS--------ASHEQLLAELWCYEAAERVSQNLGALNS 657 (677)
Q Consensus 589 g~~~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~---~~~~--------~~~e~~la~~~~~~~~~~~~~~~~~l~~ 657 (677)
++.+.+.|.+..+|+++..++.++-+.+.++.+.+.. +... ...+..++..+|.+...++-..+-++..
T Consensus 284 ~r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~~~a~q~~G 363 (439)
T 3m9v_A 284 RRPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVG 363 (439)
T ss_dssp TCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5677888999999999999999999999988766542 2111 1123456778888878888777777776
Q ss_pred CCCCCcchHHHHH
Q psy2177 658 GKKLDSYTKLGDI 670 (677)
Q Consensus 658 ~~~~~~~~~~~~~ 670 (677)
+.....+.-+.++
T Consensus 364 g~G~~~~~~l~r~ 376 (439)
T 3m9v_A 364 GASYTAGHPLARL 376 (439)
T ss_dssp GGGGSTTSHHHHH
T ss_pred HHHhcCCChHHHH
Confidence 6544444434333
No 80
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=41.65 E-value=86 Score=34.30 Aligned_cols=71 Identities=11% Similarity=0.016 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-CCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q psy2177 592 VVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK---NL-PSASHEQLLAELWCYEAAERVSQNLGALNSGKKLD 662 (677)
Q Consensus 592 ~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~---~~-~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~~~~~ 662 (677)
+.+.|.+..+|+++.+++-++-+.+.+|...+.. |. .....+..+|..||.+...+|-..+-+|..+...+
T Consensus 312 i~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~ 386 (481)
T 2yyk_A 312 ADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPDRGALDGARNLYPRLYPRIREILEQIGASGLIT 386 (481)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 7788999999999999999999999999987743 43 13356889999999999999999999998764444
No 81
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=36.62 E-value=79 Score=34.70 Aligned_cols=67 Identities=4% Similarity=-0.111 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-CCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy2177 592 VVEEQFLLNRLAAAAFDTYTMAVVLSRATRSLNK---NL-PSASHEQLLAELWCYEAAERVSQNLGALNSG 658 (677)
Q Consensus 592 ~~~~q~~l~rla~~~~~ly~~~a~l~ra~~~~~~---~~-~~~~~e~~la~~~~~~~~~~~~~~~~~l~~~ 658 (677)
+.+.|.+..+|+++.+++.++-+.+.+|...+.. |. .....+..++..+|.++..+|-..+-+|..+
T Consensus 320 i~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg 390 (490)
T 1u8v_A 320 AQKASHVKDKLIEMTHLNETLYCCGIACSAEGYPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGG 390 (490)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCT
T ss_pred chhcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 6778999999999999999999999999887643 42 1235688999999999999999998888876
Done!