Query psy2178
Match_columns 357
No_of_seqs 289 out of 2588
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 18:16:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2178.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2178hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA03392 egt ecdysteroid UDP-g 100.0 3.6E-55 7.9E-60 431.0 29.3 282 1-289 164-450 (507)
2 PF00201 UDPGT: UDP-glucoronos 100.0 2.1E-54 4.6E-59 429.4 7.8 287 9-305 155-447 (500)
3 PLN02207 UDP-glycosyltransfera 100.0 2.3E-41 4.9E-46 328.2 18.0 221 86-323 211-467 (468)
4 KOG1192|consensus 100.0 1.6E-38 3.4E-43 315.4 26.3 284 2-289 140-440 (496)
5 PLN02562 UDP-glycosyltransfera 100.0 1.2E-38 2.5E-43 309.8 20.2 216 86-320 205-448 (448)
6 PLN02208 glycosyltransferase f 100.0 1.1E-38 2.3E-43 308.8 17.7 215 86-321 193-439 (442)
7 PLN02554 UDP-glycosyltransfera 100.0 4.7E-39 1E-43 315.7 15.4 219 86-321 210-478 (481)
8 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.5E-38 3.4E-43 308.4 18.4 219 86-322 203-451 (451)
9 PLN03004 UDP-glycosyltransfera 100.0 7.9E-38 1.7E-42 302.5 16.6 203 86-292 208-445 (451)
10 PLN02992 coniferyl-alcohol glu 100.0 1E-37 2.2E-42 303.3 17.1 222 86-322 200-470 (481)
11 PLN02670 transferase, transfer 100.0 1.7E-37 3.7E-42 301.4 18.5 200 86-289 213-450 (472)
12 PLN02167 UDP-glycosyltransfera 100.0 9.8E-38 2.1E-42 305.9 15.9 219 86-321 215-472 (475)
13 PLN02555 limonoid glucosyltran 100.0 2.6E-37 5.7E-42 301.0 18.5 219 86-322 213-470 (480)
14 PLN03015 UDP-glucosyl transfer 100.0 2.9E-37 6.3E-42 298.6 17.1 217 86-319 204-466 (470)
15 PLN02210 UDP-glucosyl transfer 100.0 1.3E-36 2.8E-41 295.9 19.1 217 86-320 199-454 (456)
16 PLN02152 indole-3-acetate beta 100.0 6.9E-37 1.5E-41 296.2 16.8 216 87-319 197-454 (455)
17 PLN03007 UDP-glucosyltransfera 100.0 9.6E-37 2.1E-41 299.7 17.3 221 86-323 217-482 (482)
18 PLN00164 glucosyltransferase; 100.0 2.9E-36 6.4E-41 295.1 17.7 219 86-321 206-473 (480)
19 PLN02863 UDP-glucoronosyl/UDP- 100.0 2E-36 4.4E-41 295.5 16.3 221 86-323 214-473 (477)
20 PLN02764 glycosyltransferase f 100.0 3.1E-36 6.6E-41 290.6 16.4 217 86-323 199-447 (453)
21 PLN02173 UDP-glucosyl transfer 100.0 1.1E-35 2.5E-40 287.3 17.4 214 86-319 193-446 (449)
22 PLN02448 UDP-glycosyltransfera 100.0 1.4E-35 3.1E-40 289.9 17.6 219 86-321 208-457 (459)
23 PLN02534 UDP-glycosyltransfera 100.0 2.7E-35 5.8E-40 287.4 17.0 219 86-321 215-486 (491)
24 PLN00414 glycosyltransferase f 100.0 5.7E-35 1.2E-39 283.1 15.8 217 86-323 192-442 (446)
25 COG1819 Glycosyl transferases, 99.9 5.8E-27 1.3E-31 225.2 18.0 200 75-289 184-386 (406)
26 TIGR01426 MGT glycosyltransfer 99.9 2.7E-26 5.8E-31 221.3 21.2 215 58-288 156-376 (392)
27 cd03784 GT1_Gtf_like This fami 99.9 1.2E-25 2.7E-30 217.2 22.6 186 94-286 196-386 (401)
28 PRK12446 undecaprenyldiphospho 99.6 1.6E-14 3.5E-19 137.1 15.2 169 106-281 154-336 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.6 5.1E-14 1.1E-18 131.8 14.7 123 134-268 191-317 (318)
30 TIGR00661 MJ1255 conserved hyp 99.5 5.1E-14 1.1E-18 132.2 12.8 127 134-275 187-318 (321)
31 PF04101 Glyco_tran_28_C: Glyc 99.5 1.6E-15 3.4E-20 128.9 1.6 132 137-275 1-148 (167)
32 COG0707 MurG UDP-N-acetylgluco 99.5 1.1E-12 2.3E-17 123.8 14.9 157 107-272 155-325 (357)
33 PRK00726 murG undecaprenyldiph 99.3 5.8E-11 1.3E-15 113.0 15.3 189 86-284 136-337 (357)
34 cd03785 GT1_MurG MurG is an N- 99.2 3.6E-10 7.7E-15 107.0 14.4 185 86-280 134-333 (350)
35 PF00201 UDPGT: UDP-glucoronos 99.1 3.5E-11 7.7E-16 119.8 5.5 67 287-356 271-338 (500)
36 COG4671 Predicted glycosyl tra 99.0 5.6E-09 1.2E-13 95.4 13.9 179 86-274 167-368 (400)
37 PHA03392 egt ecdysteroid UDP-g 99.0 5.7E-10 1.2E-14 110.7 7.7 69 287-356 292-361 (507)
38 PRK13609 diacylglycerol glucos 99.0 7.1E-09 1.5E-13 99.6 14.1 135 134-279 201-346 (380)
39 PRK13608 diacylglycerol glucos 99.0 1E-08 2.2E-13 99.0 13.8 132 134-276 201-343 (391)
40 TIGR01133 murG undecaprenyldip 98.8 2.6E-08 5.7E-13 94.2 11.2 86 194-281 243-331 (348)
41 PLN02605 monogalactosyldiacylg 98.7 2.3E-07 5E-12 89.3 13.8 136 134-277 205-354 (382)
42 TIGR03590 PseG pseudaminic aci 98.7 6.1E-08 1.3E-12 89.2 9.4 98 136-241 171-278 (279)
43 KOG1192|consensus 98.6 5.9E-08 1.3E-12 96.5 7.0 66 290-355 276-349 (496)
44 KOG3349|consensus 98.6 3E-07 6.5E-12 74.0 8.1 112 136-249 4-130 (170)
45 PLN03004 UDP-glycosyltransfera 98.4 5.7E-07 1.2E-11 87.9 7.1 66 288-357 267-350 (451)
46 TIGR00215 lpxB lipid-A-disacch 98.4 1E-06 2.2E-11 84.9 8.1 193 87-286 139-366 (385)
47 TIGR03492 conserved hypothetic 98.3 4.6E-06 1E-10 80.6 11.3 181 86-279 160-372 (396)
48 PLN02207 UDP-glycosyltransfera 98.3 1.3E-06 2.9E-11 85.7 6.6 65 288-356 272-347 (468)
49 PLN02152 indole-3-acetate beta 98.2 1.9E-06 4.1E-11 84.3 6.8 68 286-357 255-343 (455)
50 PLN02670 transferase, transfer 98.2 2.4E-06 5.1E-11 84.0 6.7 69 284-356 270-354 (472)
51 PLN02562 UDP-glycosyltransfera 98.2 2.7E-06 5.8E-11 83.4 6.5 70 284-356 265-343 (448)
52 PLN02992 coniferyl-alcohol glu 98.2 2.4E-06 5.3E-11 84.0 6.1 68 285-356 256-353 (481)
53 PRK00025 lpxB lipid-A-disaccha 98.1 1E-05 2.3E-10 77.5 8.7 188 86-281 134-351 (380)
54 cd03814 GT1_like_2 This family 98.1 0.00011 2.3E-09 68.9 15.0 184 86-281 144-342 (364)
55 PLN02554 UDP-glycosyltransfera 98.1 6.2E-06 1.3E-10 81.7 6.1 64 289-356 272-357 (481)
56 PLN02410 UDP-glucoronosyl/UDP- 98.0 1.1E-05 2.4E-10 79.0 6.8 65 288-356 261-339 (451)
57 PLN02208 glycosyltransferase f 98.0 1.2E-05 2.5E-10 78.7 6.4 65 288-356 248-326 (442)
58 PLN03015 UDP-glucosyl transfer 98.0 1.3E-05 2.8E-10 78.6 6.4 66 288-357 264-351 (470)
59 PLN02555 limonoid glucosyltran 97.9 2.1E-05 4.5E-10 77.6 6.8 65 288-356 274-352 (480)
60 cd03795 GT1_like_4 This family 97.9 0.00033 7.1E-09 65.8 14.4 132 135-279 190-340 (357)
61 COG5017 Uncharacterized conser 97.8 0.00028 6E-09 56.1 10.2 110 138-252 2-122 (161)
62 PLN03007 UDP-glucosyltransfera 97.8 4.4E-05 9.6E-10 75.7 7.1 69 285-357 278-361 (482)
63 COG3980 spsG Spore coat polysa 97.8 0.00027 5.8E-09 63.4 10.3 138 137-283 160-305 (318)
64 PLN02534 UDP-glycosyltransfera 97.7 5.6E-05 1.2E-09 74.7 6.4 66 288-357 280-360 (491)
65 PF00534 Glycos_transf_1: Glyc 97.6 0.00068 1.5E-08 57.1 11.1 139 132-280 11-167 (172)
66 cd03817 GT1_UGDG_like This fam 97.6 0.0012 2.6E-08 61.7 13.7 131 135-275 201-347 (374)
67 cd03823 GT1_ExpE7_like This fa 97.6 0.00039 8.4E-09 64.9 10.1 132 134-278 189-336 (359)
68 cd03801 GT1_YqgM_like This fam 97.6 0.0016 3.5E-08 60.4 14.2 180 86-278 144-348 (374)
69 cd03820 GT1_amsD_like This fam 97.6 0.002 4.2E-08 59.5 14.6 178 86-281 135-329 (348)
70 PLN00164 glucosyltransferase; 97.6 0.00013 2.7E-09 72.3 6.5 65 288-356 269-354 (480)
71 cd03786 GT1_UDP-GlcNAc_2-Epime 97.6 0.00071 1.5E-08 64.3 11.4 181 86-278 141-344 (363)
72 PLN02173 UDP-glucosyl transfer 97.6 0.00019 4.2E-09 70.2 7.4 63 289-357 262-333 (449)
73 PLN02167 UDP-glycosyltransfera 97.6 0.00013 2.8E-09 72.2 6.2 64 289-356 278-355 (475)
74 cd03798 GT1_wlbH_like This fam 97.5 0.0031 6.8E-08 58.6 15.3 176 86-274 148-347 (377)
75 PLN02448 UDP-glycosyltransfera 97.5 0.00017 3.6E-09 71.2 6.4 64 289-356 272-338 (459)
76 cd04946 GT1_AmsK_like This fam 97.5 0.003 6.5E-08 61.3 15.0 138 134-277 228-383 (407)
77 cd03800 GT1_Sucrose_synthase T 97.5 0.0023 4.9E-08 61.2 13.4 129 135-276 219-373 (398)
78 PLN02871 UDP-sulfoquinovose:DA 97.5 0.0015 3.3E-08 64.5 12.4 130 136-278 263-407 (465)
79 PRK15484 lipopolysaccharide 1, 97.4 0.0035 7.7E-08 60.2 14.3 133 135-275 192-348 (380)
80 cd03822 GT1_ecORF704_like This 97.4 0.0032 6.9E-08 59.0 13.7 180 86-276 134-339 (366)
81 PRK05749 3-deoxy-D-manno-octul 97.4 0.0025 5.3E-08 62.2 13.1 91 186-282 303-399 (425)
82 cd05844 GT1_like_7 Glycosyltra 97.4 0.0017 3.6E-08 61.5 11.6 132 136-276 188-341 (367)
83 cd03794 GT1_wbuB_like This fam 97.4 0.0035 7.6E-08 58.8 13.7 184 86-280 165-374 (394)
84 TIGR00236 wecB UDP-N-acetylglu 97.3 0.0032 6.8E-08 60.1 12.6 179 87-280 142-343 (365)
85 cd04962 GT1_like_5 This family 97.3 0.0054 1.2E-07 58.1 13.9 182 86-277 142-342 (371)
86 PF13844 Glyco_transf_41: Glyc 97.3 0.0034 7.4E-08 61.3 12.1 140 132-278 281-437 (468)
87 cd03804 GT1_wbaZ_like This fam 97.3 0.0014 3E-08 62.0 9.1 122 138-273 197-328 (351)
88 PLN02863 UDP-glucoronosyl/UDP- 97.3 0.00052 1.1E-08 67.8 6.4 64 289-356 281-358 (477)
89 cd03821 GT1_Bme6_like This fam 97.2 0.0053 1.2E-07 57.3 12.4 130 135-279 202-353 (375)
90 cd03808 GT1_cap1E_like This fa 97.2 0.0057 1.2E-07 56.6 12.5 133 135-277 187-335 (359)
91 PLN02210 UDP-glucosyl transfer 97.2 0.00098 2.1E-08 65.6 7.2 68 285-356 262-339 (456)
92 PF02350 Epimerase_2: UDP-N-ac 97.1 0.00091 2E-08 63.5 6.0 180 87-278 123-325 (346)
93 cd03811 GT1_WabH_like This fam 97.1 0.0093 2E-07 54.9 12.6 177 86-276 135-337 (353)
94 cd03799 GT1_amsK_like This is 97.1 0.0067 1.4E-07 56.8 11.7 131 135-275 178-331 (355)
95 PRK15427 colanic acid biosynth 97.0 0.0081 1.8E-07 58.3 12.2 129 135-276 221-376 (406)
96 cd04949 GT1_gtfA_like This fam 97.0 0.0068 1.5E-07 57.7 11.2 132 136-275 204-349 (372)
97 TIGR03449 mycothiol_MshA UDP-N 96.9 0.018 3.8E-07 55.6 13.6 135 135-278 218-375 (405)
98 cd03809 GT1_mtfB_like This fam 96.9 0.0048 1E-07 57.8 9.4 89 183-281 251-346 (365)
99 PRK14089 ipid-A-disaccharide s 96.9 0.00093 2E-08 63.2 4.1 166 105-285 143-332 (347)
100 cd04951 GT1_WbdM_like This fam 96.9 0.009 1.9E-07 56.1 10.8 133 134-277 186-333 (360)
101 cd03807 GT1_WbnK_like This fam 96.9 0.017 3.7E-07 53.6 12.4 131 134-275 191-336 (365)
102 cd03812 GT1_CapH_like This fam 96.8 0.029 6.3E-07 52.7 13.5 139 134-282 190-342 (358)
103 cd03816 GT1_ALG1_like This fam 96.7 0.016 3.5E-07 56.4 10.9 77 185-271 294-381 (415)
104 cd03805 GT1_ALG2_like This fam 96.7 0.034 7.4E-07 53.2 13.0 132 135-276 210-369 (392)
105 COG1519 KdtA 3-deoxy-D-manno-o 96.6 0.082 1.8E-06 50.5 14.9 192 78-284 172-399 (419)
106 TIGR03088 stp2 sugar transfera 96.5 0.034 7.3E-07 53.0 12.1 134 134-276 192-343 (374)
107 cd03825 GT1_wcfI_like This fam 96.5 0.078 1.7E-06 49.7 14.2 85 183-275 242-334 (365)
108 PRK09922 UDP-D-galactose:(gluc 96.4 0.028 6E-07 53.5 10.6 129 136-275 180-328 (359)
109 PRK10307 putative glycosyl tra 96.4 0.045 9.8E-07 53.0 12.1 133 134-280 227-382 (412)
110 TIGR02149 glgA_Coryne glycogen 96.3 0.06 1.3E-06 51.4 12.4 130 136-276 201-357 (388)
111 cd03813 GT1_like_3 This family 96.3 0.053 1.1E-06 53.8 11.9 134 135-278 292-449 (475)
112 cd03818 GT1_ExpC_like This fam 96.3 0.034 7.4E-07 53.6 10.4 86 184-277 280-372 (396)
113 PRK15179 Vi polysaccharide bio 96.2 0.065 1.4E-06 55.5 12.5 137 136-279 517-671 (694)
114 PF13692 Glyco_trans_1_4: Glyc 96.1 0.031 6.7E-07 44.8 7.9 124 137-271 3-135 (135)
115 cd03819 GT1_WavL_like This fam 96.0 0.17 3.8E-06 47.2 13.6 133 134-276 183-336 (355)
116 TIGR02918 accessory Sec system 96.0 0.11 2.5E-06 51.8 12.6 131 135-272 318-468 (500)
117 PLN02764 glycosyltransferase f 96.0 0.012 2.6E-07 57.7 5.6 64 288-357 254-333 (453)
118 cd03792 GT1_Trehalose_phosphor 95.9 0.15 3.2E-06 48.6 13.0 133 135-278 189-344 (372)
119 COG3914 Spy Predicted O-linked 95.9 0.076 1.7E-06 52.4 10.8 125 134-266 428-573 (620)
120 cd04950 GT1_like_1 Glycosyltra 95.9 0.11 2.4E-06 49.7 11.8 168 86-272 153-341 (373)
121 PF02684 LpxB: Lipid-A-disacch 95.7 0.069 1.5E-06 51.0 9.5 202 78-288 128-357 (373)
122 TIGR03087 stp1 sugar transfera 95.5 0.13 2.9E-06 49.5 11.0 84 184-277 279-368 (397)
123 TIGR03568 NeuC_NnaA UDP-N-acet 95.5 0.2 4.3E-06 48.0 12.0 153 105-270 166-338 (365)
124 TIGR02472 sucr_P_syn_N sucrose 95.5 0.11 2.4E-06 51.0 10.5 88 183-276 315-411 (439)
125 PLN02275 transferase, transfer 95.5 0.12 2.5E-06 49.6 10.3 75 185-269 286-371 (371)
126 PRK09814 beta-1,6-galactofuran 95.4 0.045 9.7E-07 51.6 7.1 98 182-287 204-318 (333)
127 cd04955 GT1_like_6 This family 95.4 0.08 1.7E-06 49.7 8.8 124 138-276 195-335 (363)
128 cd03796 GT1_PIG-A_like This fa 95.2 0.27 5.8E-06 47.4 11.9 127 135-272 192-334 (398)
129 PRK01021 lpxB lipid-A-disaccha 94.8 0.37 8.1E-06 48.6 11.8 201 77-287 355-587 (608)
130 PF04007 DUF354: Protein of un 94.7 0.64 1.4E-05 43.9 12.5 138 123-269 167-308 (335)
131 TIGR02468 sucrsPsyn_pln sucros 94.2 0.32 6.9E-06 52.3 10.3 138 125-274 469-640 (1050)
132 KOG4626|consensus 94.2 0.26 5.7E-06 49.2 8.8 165 104-276 724-909 (966)
133 PHA01633 putative glycosyl tra 94.0 0.32 7E-06 45.9 9.0 85 182-270 198-306 (335)
134 PLN00414 glycosyltransferase f 94.0 0.083 1.8E-06 51.9 5.1 66 288-357 249-328 (446)
135 cd03784 GT1_Gtf_like This fami 93.6 0.17 3.6E-06 48.8 6.5 64 290-356 238-303 (401)
136 TIGR01426 MGT glycosyltransfer 93.4 0.2 4.3E-06 48.3 6.5 64 289-356 223-290 (392)
137 PF06722 DUF1205: Protein of u 93.1 0.16 3.6E-06 38.6 4.3 62 126-188 30-97 (97)
138 PHA01630 putative group 1 glyc 93.0 1.2 2.7E-05 41.9 11.2 75 192-271 197-294 (331)
139 COG1819 Glycosyl transferases, 93.0 0.27 5.8E-06 47.8 6.7 63 289-356 235-299 (406)
140 cd03806 GT1_ALG11_like This fa 92.9 0.97 2.1E-05 44.0 10.6 81 183-272 303-393 (419)
141 cd03802 GT1_AviGT4_like This f 92.7 0.93 2E-05 41.9 9.9 119 137-271 172-308 (335)
142 PRK15490 Vi polysaccharide bio 92.3 1.3 2.7E-05 44.6 10.4 111 137-254 399-523 (578)
143 PF06258 Mito_fiss_Elm1: Mitoc 92.0 5.6 0.00012 37.2 13.9 159 86-252 97-281 (311)
144 cd03791 GT1_Glycogen_synthase_ 91.4 0.69 1.5E-05 45.7 7.8 129 135-270 295-441 (476)
145 TIGR02095 glgA glycogen/starch 91.3 1.6 3.6E-05 43.1 10.3 121 136-270 291-436 (473)
146 PRK14098 glycogen synthase; Pr 91.3 1.4 3E-05 44.0 9.7 124 137-269 308-449 (489)
147 TIGR03713 acc_sec_asp1 accesso 90.8 0.85 1.8E-05 45.8 7.7 76 185-273 409-490 (519)
148 cd01635 Glycosyltransferase_GT 90.6 1.6 3.4E-05 37.4 8.4 51 182-233 158-215 (229)
149 PRK10125 putative glycosyl tra 90.6 1.6 3.6E-05 42.3 9.3 99 156-265 258-365 (405)
150 PLN02501 digalactosyldiacylgly 90.5 2.5 5.5E-05 43.6 10.6 77 186-273 602-683 (794)
151 COG0381 WecB UDP-N-acetylgluco 89.9 4.1 8.9E-05 38.8 10.9 167 107-283 169-353 (383)
152 PRK10017 colanic acid biosynth 89.5 3.7 8.1E-05 40.1 10.8 84 197-286 323-408 (426)
153 PLN02846 digalactosyldiacylgly 89.5 4.2 9E-05 40.2 11.1 73 189-272 288-364 (462)
154 COG3660 Predicted nucleoside-d 87.7 21 0.00046 32.3 14.1 162 87-252 110-298 (329)
155 PF13524 Glyco_trans_1_2: Glyc 87.1 1.6 3.4E-05 32.3 5.1 62 210-280 9-71 (92)
156 TIGR02193 heptsyl_trn_I lipopo 86.3 6.9 0.00015 36.3 10.2 131 128-269 171-319 (319)
157 PLN00142 sucrose synthase 86.0 14 0.0003 39.2 12.9 87 184-276 641-741 (815)
158 PLN02949 transferase, transfer 84.9 1.3 2.9E-05 43.7 4.8 80 183-271 333-422 (463)
159 PRK00654 glgA glycogen synthas 84.9 5.8 0.00013 39.2 9.3 124 136-270 282-427 (466)
160 TIGR02470 sucr_synth sucrose s 83.9 12 0.00026 39.5 11.3 88 183-276 617-718 (784)
161 TIGR02919 accessory Sec system 82.4 8.4 0.00018 37.8 9.1 113 153-274 291-414 (438)
162 TIGR00661 MJ1255 conserved hyp 81.6 7.6 0.00016 36.2 8.3 33 197-229 87-119 (321)
163 PF05159 Capsule_synth: Capsul 81.2 8.5 0.00018 34.9 8.2 73 154-229 141-224 (269)
164 PRK14077 pnk inorganic polypho 79.9 21 0.00046 32.9 10.3 94 153-272 24-121 (287)
165 cd03789 GT1_LPS_heptosyltransf 79.2 9.8 0.00021 34.6 8.0 91 135-229 121-223 (279)
166 COG4370 Uncharacterized protei 79.2 6 0.00013 36.5 6.3 62 217-280 324-388 (412)
167 PRK02155 ppnK NAD(+)/NADH kina 79.0 24 0.00051 32.7 10.4 97 153-272 20-120 (291)
168 PRK04885 ppnK inorganic polyph 78.7 5.6 0.00012 36.2 6.1 54 203-272 35-94 (265)
169 COG0763 LpxB Lipid A disacchar 76.2 15 0.00032 35.1 8.2 195 86-287 136-364 (381)
170 PRK14099 glycogen synthase; Pr 75.9 23 0.00049 35.3 10.0 90 184-275 349-451 (485)
171 PLN02939 transferase, transfer 73.2 47 0.001 35.9 11.8 83 184-270 836-930 (977)
172 PF01075 Glyco_transf_9: Glyco 72.3 13 0.00028 33.0 6.7 92 134-229 104-208 (247)
173 PRK01231 ppnK inorganic polyph 71.7 45 0.00098 30.9 10.2 97 153-272 19-119 (295)
174 PRK02649 ppnK inorganic polyph 70.8 9.4 0.0002 35.6 5.5 54 203-272 68-125 (305)
175 PRK03708 ppnK inorganic polyph 68.5 11 0.00024 34.6 5.4 95 153-272 15-113 (277)
176 TIGR00725 conserved hypothetic 68.3 54 0.0012 27.3 9.1 97 124-231 21-123 (159)
177 PRK01911 ppnK inorganic polyph 67.6 13 0.00027 34.5 5.6 54 203-272 64-121 (292)
178 PRK10964 ADP-heptose:LPS hepto 67.2 37 0.00079 31.6 8.9 127 135-269 178-320 (322)
179 PRK03372 ppnK inorganic polyph 67.2 13 0.00029 34.6 5.7 54 203-272 72-129 (306)
180 PRK10422 lipopolysaccharide co 66.6 51 0.0011 31.1 9.8 92 134-229 182-287 (352)
181 PRK04539 ppnK inorganic polyph 66.5 13 0.00029 34.4 5.6 98 153-272 20-125 (296)
182 PLN02929 NADH kinase 65.9 11 0.00023 35.0 4.8 98 152-272 32-138 (301)
183 PRK03501 ppnK inorganic polyph 65.9 17 0.00036 33.1 6.0 55 203-272 39-98 (264)
184 TIGR02201 heptsyl_trn_III lipo 65.7 47 0.001 31.1 9.4 92 134-229 180-285 (344)
185 COG0859 RfaF ADP-heptose:LPS h 65.2 36 0.00078 32.0 8.4 91 135-229 175-276 (334)
186 PRK03378 ppnK inorganic polyph 64.8 19 0.00041 33.3 6.2 97 153-272 20-120 (292)
187 TIGR02195 heptsyl_trn_II lipop 63.4 47 0.001 30.9 8.9 92 134-229 173-276 (334)
188 PRK01185 ppnK inorganic polyph 60.9 20 0.00044 32.7 5.6 54 203-272 52-106 (271)
189 PRK10916 ADP-heptose:LPS hepto 60.3 54 0.0012 30.8 8.7 92 134-229 179-286 (348)
190 PRK02231 ppnK inorganic polyph 60.1 19 0.00042 32.9 5.3 53 203-271 42-98 (272)
191 PLN02316 synthase/transferase 60.0 81 0.0018 34.6 10.6 84 184-271 899-998 (1036)
192 PRK14075 pnk inorganic polypho 57.0 25 0.00053 31.9 5.5 84 152-272 11-95 (256)
193 TIGR02400 trehalose_OtsA alpha 53.7 41 0.00089 33.2 6.9 86 190-284 341-437 (456)
194 PLN02935 Bifunctional NADH kin 53.6 30 0.00066 34.4 5.7 55 202-272 261-319 (508)
195 PRK14076 pnk inorganic polypho 53.4 32 0.00068 35.1 6.1 54 203-272 348-405 (569)
196 cd03793 GT1_Glycogen_synthase_ 50.0 50 0.0011 33.6 6.7 73 195-271 468-552 (590)
197 COG0438 RfaG Glycosyltransfera 49.9 68 0.0015 28.5 7.4 81 184-272 256-343 (381)
198 PLN02727 NAD kinase 49.3 98 0.0021 33.3 8.9 55 202-272 742-800 (986)
199 PRK02645 ppnK inorganic polyph 47.1 84 0.0018 29.2 7.5 68 153-231 18-89 (305)
200 PRK04761 ppnK inorganic polyph 45.0 23 0.0005 31.8 3.2 29 203-231 25-57 (246)
201 COG0801 FolK 7,8-dihydro-6-hyd 45.0 48 0.001 27.7 4.8 33 137-172 3-35 (160)
202 PF07429 Glyco_transf_56: 4-al 44.1 2.9E+02 0.0063 26.3 11.2 126 136-269 184-331 (360)
203 COG0391 Uncharacterized conser 43.9 1.9E+02 0.0041 27.1 9.1 63 105-175 166-228 (323)
204 KOG0853|consensus 43.4 8.3 0.00018 38.2 0.2 63 214-280 380-442 (495)
205 PRK12446 undecaprenyldiphospho 43.4 2.1E+02 0.0046 27.0 9.8 32 198-229 86-120 (352)
206 COG2159 Predicted metal-depend 43.2 95 0.0021 28.7 7.1 100 109-213 99-202 (293)
207 PF06506 PrpR_N: Propionate ca 42.8 17 0.00038 30.7 2.0 33 200-233 31-63 (176)
208 cd03412 CbiK_N Anaerobic cobal 42.4 53 0.0011 26.1 4.7 39 135-176 1-40 (127)
209 TIGR00730 conserved hypothetic 41.8 2.2E+02 0.0047 24.2 10.6 112 125-247 23-153 (178)
210 cd03788 GT1_TPS Trehalose-6-Ph 41.8 3.4E+02 0.0073 26.8 11.2 75 189-272 345-428 (460)
211 PF10933 DUF2827: Protein of u 36.7 49 0.0011 31.4 4.1 87 185-285 253-348 (364)
212 PF03641 Lysine_decarbox: Poss 35.3 1.5E+02 0.0033 23.6 6.4 72 157-229 2-90 (133)
213 PRK06270 homoserine dehydrogen 33.0 1E+02 0.0022 29.1 5.8 58 194-251 80-149 (341)
214 PF00282 Pyridoxal_deC: Pyrido 32.8 3.8E+02 0.0083 25.6 9.7 106 203-332 103-230 (373)
215 COG1817 Uncharacterized protei 31.8 2.8E+02 0.006 26.0 8.0 140 123-273 169-316 (346)
216 PF00289 CPSase_L_chain: Carba 31.4 97 0.0021 24.0 4.4 65 154-219 12-88 (110)
217 PF08756 YfkB: YfkB-like domai 30.8 2.2E+02 0.0049 23.1 6.3 55 255-327 12-66 (153)
218 TIGR01761 thiaz-red thiazoliny 30.6 1.9E+02 0.0041 27.5 7.0 80 158-237 16-105 (343)
219 PF06180 CbiK: Cobalt chelatas 30.0 81 0.0018 28.7 4.3 40 136-177 2-42 (262)
220 PLN02470 acetolactate synthase 29.9 66 0.0014 32.9 4.2 87 141-230 2-109 (585)
221 PF12894 Apc4_WD40: Anaphase-p 29.3 22 0.00048 22.9 0.4 20 338-357 9-28 (47)
222 PRK13181 hisH imidazole glycer 28.8 2.3E+02 0.0049 24.2 6.9 28 137-174 2-29 (199)
223 PRK00561 ppnK inorganic polyph 28.1 65 0.0014 29.2 3.3 28 203-230 33-64 (259)
224 COG0061 nadF NAD kinase [Coenz 27.4 1.1E+02 0.0023 28.1 4.8 52 202-270 54-110 (281)
225 PF14350 Beta_protein: Beta pr 26.8 1.9E+02 0.0042 27.2 6.5 46 224-269 98-146 (347)
226 cd03146 GAT1_Peptidase_E Type 26.0 4.3E+02 0.0094 22.8 11.0 59 108-172 2-64 (212)
227 PF00731 AIRC: AIR carboxylase 25.8 1.7E+02 0.0036 24.2 5.0 135 137-286 2-147 (150)
228 PF02571 CbiJ: Precorrin-6x re 24.9 5.1E+02 0.011 23.3 9.2 94 124-229 119-225 (249)
229 KOG0129|consensus 24.8 1.2E+02 0.0026 30.1 4.6 54 88-145 351-406 (520)
230 PF06180 CbiK: Cobalt chelatas 24.3 1.1E+02 0.0023 27.9 4.0 42 292-335 2-44 (262)
231 PRK14501 putative bifunctional 23.3 2.9E+02 0.0062 29.2 7.6 80 188-272 345-429 (726)
232 PRK13057 putative lipid kinase 23.3 91 0.002 28.5 3.5 30 202-231 49-82 (287)
233 PF01513 NAD_kinase: ATP-NAD k 22.9 88 0.0019 28.6 3.3 53 202-270 75-131 (285)
234 PLN02880 tyrosine decarboxylas 22.6 7E+02 0.015 24.9 9.8 64 204-269 147-234 (490)
235 COG0118 HisH Glutamine amidotr 22.5 2.5E+02 0.0054 24.4 5.6 88 137-244 4-94 (204)
236 cd06533 Glyco_transf_WecG_TagA 22.4 3.1E+02 0.0068 22.8 6.4 82 87-177 47-133 (171)
237 TIGR02398 gluc_glyc_Psyn gluco 22.1 5.4E+02 0.012 25.7 8.8 138 137-284 286-463 (487)
238 PRK11579 putative oxidoreducta 22.1 6.5E+02 0.014 23.5 9.4 87 136-234 6-100 (346)
239 cd03818 GT1_ExpC_like This fam 21.8 4.7E+02 0.01 24.7 8.3 74 154-229 11-115 (396)
240 PRK13059 putative lipid kinase 21.7 94 0.002 28.6 3.3 31 202-232 55-91 (295)
241 TIGR00377 ant_ant_sig anti-ant 20.5 3.6E+02 0.0078 19.9 5.9 65 109-174 17-81 (108)
242 TIGR00147 lipid kinase, YegS/R 20.2 97 0.0021 28.3 3.0 67 153-232 18-92 (293)
No 1
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.6e-55 Score=431.00 Aligned_cols=282 Identities=25% Similarity=0.464 Sum_probs=256.9
Q ss_pred CCCCCcccccccccc-cCCCCccccccccCCCCCCCHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcCCcCCCCCHH
Q psy2178 1 MATAQYFSIISWPFN-NPENPAYVPVIWTANTDSMTFWQRVTNTV-QAMAYYWLHMRTLDKEQAILNQNLDEKYRKRSLR 78 (357)
Q Consensus 1 ~~~~~~~~~~~~~~g-~p~~~~~~P~~~~~~~~~~~~~~R~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (357)
+++++.++...+.+| +|.||+|+|..++++++.|+|++|+.|.+ +.........+. +.++++++++++. ..+++.
T Consensus 164 ~ss~~~~~~~~~~~gg~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~-~~~~~l~~~~f~~--~~~~~~ 240 (507)
T PHA03392 164 ISSGYGLAENFETMGAVSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLA-DEQNKLLKQQFGP--DTPTIR 240 (507)
T ss_pred EcCCCCchhHHHhhccCCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHcCC--CCCCHH
Confidence 356777888888889 99999999999999999999999999998 555444444444 8899999999875 568899
Q ss_pred HHhcCCCCeeEEEEcCCCccccCCCCCCCeEEeCccccCC--CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHH
Q psy2178 79 EIYFDSAKDSFMFSFDSRITGYARPMQRKLVEVGPLHLVD--PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRR 156 (357)
Q Consensus 79 ~l~~~~~~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~--~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~ 156 (357)
++.+ +++++|+|+++.++++||++|++++|||+++++ .+++|+++.+|++++++|+|||||||.....+++.+.+
T Consensus 241 ~l~~---~~~l~lvns~~~~d~~rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~ 317 (507)
T PHA03392 241 ELRN---RVQLLFVNVHPVFDNNRPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFL 317 (507)
T ss_pred HHHh---CCcEEEEecCccccCCCCCCCCeeeecccccCCCCCCCCCHHHHHHHhcCCCcEEEEECCCCCcCCCCCHHHH
Confidence 9999 899999999999999999999999999999853 46889999999999877899999999986556889999
Q ss_pred HHHHHHHHhCCCceEEEEEcCCccC-CCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCCh
Q psy2178 157 KAFLKAFARLPQYRVLWKWENDVME-GLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQ 235 (357)
Q Consensus 157 ~~i~~al~~~~~~~viw~~~~~~~~-~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ 235 (357)
+.+++++++++. +|||+++++..+ ..|+|+++.+|+||.++|+||++++||||||.||+.||+++|||+|++|+++||
T Consensus 318 ~~~l~a~~~l~~-~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ 396 (507)
T PHA03392 318 QMLLRTFKKLPY-NVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQ 396 (507)
T ss_pred HHHHHHHHhCCC-eEEEEECCCcCcccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccH
Confidence 999999999998 999999875554 678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhccCC
Q psy2178 236 DLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGA 289 (357)
Q Consensus 236 ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~ 289 (357)
+.||++++++|+|+.++..+++.++|.++|+++++|++|+++|+++++.++++.
T Consensus 397 ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p 450 (507)
T PHA03392 397 FYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQP 450 (507)
T ss_pred HHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCC
Confidence 999999999999999998899999999999999999999999999999999875
No 2
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=2.1e-54 Score=429.44 Aligned_cols=287 Identities=34% Similarity=0.575 Sum_probs=220.3
Q ss_pred ccccccccCCCCccccccccCCCCCCCHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcCCcCCCCCHHHHhcCCCCe
Q psy2178 9 IISWPFNNPENPAYVPVIWTANTDSMTFWQRVTNTV-QAMAYYWLHMRTLDKEQAILNQNLDEKYRKRSLREIYFDSAKD 87 (357)
Q Consensus 9 ~~~~~~g~p~~~~~~P~~~~~~~~~~~~~~R~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (357)
......|+|.+|+|+|..++++++.|+|++|+.|.+ +.....+......+ ++++++++++. + .+..++.. ++
T Consensus 155 ~~~~~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~-~~~~~~~~~~~--~-~~~~~~~~---~~ 227 (500)
T PF00201_consen 155 LSSFSGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFYLYFRFIFRYFFSP-QDKLYKKYFGF--P-FSFRELLS---NA 227 (500)
T ss_dssp CTCCTSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHHHHHHHHHHHGGGS--TTS-EEESS---G-GGCHHHHH---HH
T ss_pred hhhhccCCCCChHHhccccccCCCccchhhhhhhhhhhhhhccccccchhh-HHHHHhhhccc--c-cccHHHHH---HH
Confidence 334444999999999999999999999999999998 66666665555534 77777777765 3 34566666 68
Q ss_pred eEEEEcCCCccccCCCCCCCeEEeCccccCCCCCCchHHHHHhcc-CCCceEEEecCCccccCCCcHHHHHHHHHHHHhC
Q psy2178 88 SFMFSFDSRITGYARPMQRKLVEVGPLHLVDPKPLDESLQKWMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL 166 (357)
Q Consensus 88 ~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~-~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~ 166 (357)
+++++|+++.+++|+|++|++++|||+++++++++++++.+|++. +++|+|||||||... .++.+.+++++++|+++
T Consensus 228 ~l~l~ns~~~ld~prp~~p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~--~~~~~~~~~~~~~~~~~ 305 (500)
T PF00201_consen 228 SLVLINSHPSLDFPRPLLPNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVS--SMPEEKLKEIAEAFENL 305 (500)
T ss_dssp HHCCSSTEEE----HHHHCTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSST--T-HHHHHHHHHHHHHCS
T ss_pred HHHhhhccccCcCCcchhhcccccCccccccccccccccchhhhccCCCCEEEEecCcccc--hhHHHHHHHHHHHHhhC
Confidence 899999999999999999999999999988888999999999998 579999999999985 47888899999999999
Q ss_pred CCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhc
Q psy2178 167 PQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIK 246 (357)
Q Consensus 167 ~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G 246 (357)
++ +|||++++.....+++|+++.+|+||.++|+||++++||||||+||++||+++|||+|++|+++||+.||+++++.|
T Consensus 306 ~~-~~iW~~~~~~~~~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G 384 (500)
T PF00201_consen 306 PQ-RFIWKYEGEPPENLPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKG 384 (500)
T ss_dssp TT-EEEEEETCSHGCHHHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTT
T ss_pred CC-cccccccccccccccceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEEe
Confidence 99 99999998666677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhccCC----CcceEEEEeecccccC
Q psy2178 247 TGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGA----PEGVIYFSLGTNMKGT 305 (357)
Q Consensus 247 ~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~----~~~vi~~slgs~~~g~ 305 (357)
+|+.++..+++.+++.++|+++++|++|++||+++++.++|+. +.++-|+++....+|.
T Consensus 385 ~g~~l~~~~~~~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~~~~~~ 447 (500)
T PF00201_consen 385 VGVVLDKNDLTEEELRAAIREVLENPSYKENAKRLSSLFRDRPISPLERAVWWIEYVARHGGA 447 (500)
T ss_dssp SEEEEGGGC-SHHHHHHHHHHHHHSHHHHHHHHHHHHTTT-----------------------
T ss_pred eEEEEEecCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999873 3456677887776654
No 3
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=2.3e-41 Score=328.20 Aligned_cols=221 Identities=23% Similarity=0.359 Sum_probs=190.5
Q ss_pred CeeEEEEcCCCccccC-------CCCCCCeEEeCccccCCCCCCc-------hHHHHHhccC-CCceEEEecCCccccCC
Q psy2178 86 KDSFMFSFDSRITGYA-------RPMQRKLVEVGPLHLVDPKPLD-------ESLQKWMDGA-PEGVIYFSLGTNMKGTS 150 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-------~~~~p~v~~vG~l~~~~~~~l~-------~~~~~~l~~~-~~~vv~vs~GS~~~~~~ 150 (357)
+++.+|+||+++||.+ ++..|+++.|||++......++ ++|.+|||++ +++||||||||...
T Consensus 211 ~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~--- 287 (468)
T PLN02207 211 KANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGR--- 287 (468)
T ss_pred cCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcC---
Confidence 6889999999999987 5667889999999864322222 5799999998 47999999999985
Q ss_pred CcHHHHHHHHHHHHhCCCceEEEEEcCCcc-----------CCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHH
Q psy2178 151 MGDFRRKAFLKAFARLPQYRVLWKWENDVM-----------EGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEA 219 (357)
Q Consensus 151 ~~~~~~~~i~~al~~~~~~~viw~~~~~~~-----------~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~ea 219 (357)
++.+++++++.+|+.+++ +|||++++... +..++|+++.+|+||.+||+|+++++||||||+||++||
T Consensus 288 ~~~~q~~ela~~l~~~~~-~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Ea 366 (468)
T PLN02207 288 LRGPLVKEIAHGLELCQY-RFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVES 366 (468)
T ss_pred CCHHHHHHHHHHHHHCCC-cEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHH
Confidence 889999999999999999 99999985221 124678899999999999999999999999999999999
Q ss_pred HhcCceEEeecCCCChHHHHHHHHH-hceeeeee------c-cCCCHHHHHHHHHHHhc--CcchhhccccchhhhccCC
Q psy2178 220 FHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLE------Y-EDLNEEIIFNALKLVLE--DPQVFKSGWMSLQKWMDGA 289 (357)
Q Consensus 220 l~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~------~-~~~~~~~l~~~i~~~l~--~~~~~~~a~~l~~~~~~~~ 289 (357)
+++|||+|++|+++||+.||+++++ +|+|+.+. . ..++.++|.++|+++|+ +++||+||+++++++++..
T Consensus 367 i~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~ 446 (468)
T PLN02207 367 LWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRAT 446 (468)
T ss_pred HHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999887 89998663 1 23589999999999997 6799999999999999887
Q ss_pred CcceEEEEeecccccCcCchHHHHHHHHHHccCC
Q psy2178 290 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP 323 (357)
Q Consensus 290 ~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp 323 (357)
.+| |||..++. .|++.++.++
T Consensus 447 ~~G-----------GSS~~~l~--~~v~~~~~~~ 467 (468)
T PLN02207 447 KNG-----------GSSFAAIE--KFIHDVIGIK 467 (468)
T ss_pred cCC-----------CcHHHHHH--HHHHHHHhcc
Confidence 665 88888886 8998887654
No 4
>KOG1192|consensus
Probab=100.00 E-value=1.6e-38 Score=315.44 Aligned_cols=284 Identities=29% Similarity=0.496 Sum_probs=232.1
Q ss_pred CCCCcccccccccccCCCCccccccccCCC-CCCCHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcCCcC-CCCCHH
Q psy2178 2 ATAQYFSIISWPFNNPENPAYVPVIWTANT-DSMTFWQRVTNTV-QAMAYYWLHMRTLDKEQAILNQNLDEKY-RKRSLR 78 (357)
Q Consensus 2 ~~~~~~~~~~~~~g~p~~~~~~P~~~~~~~-~~~~~~~R~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (357)
.++...+.....+|.|.+.+|+|...+... +.|++++|..|.. .............+.++...++++.... ......
T Consensus 140 ~~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (496)
T KOG1192|consen 140 LSFPTSSAVLLALGLPSPLSYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTAS 219 (496)
T ss_pred ecccCchHHHHhcCCcCcccccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHH
Confidence 456677888889999999999999988665 7899999999988 5554544443333455666666654300 124455
Q ss_pred HHhcCCCCeeEEEEcCCCcccc-CCCCCCCeEEeCccccCCCC---CCchHHHHHhccCCCceEEEecCCccccCCCcHH
Q psy2178 79 EIYFDSAKDSFMFSFDSRITGY-ARPMQRKLVEVGPLHLVDPK---PLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDF 154 (357)
Q Consensus 79 ~l~~~~~~~~~~l~~s~~~l~~-~~~~~p~v~~vG~l~~~~~~---~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~ 154 (357)
++.. +++..++|+++.+++ +++..+++++|||++..... +++.++.+.++....++|||||||+..+..++.+
T Consensus 220 ~i~~---~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~ 296 (496)
T KOG1192|consen 220 GIIV---NASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEE 296 (496)
T ss_pred Hhhh---cCeEEEEccCcccCCCCCCCCCCceEECcEEecCccccccccHHHHHHHhhccCCeEEEECCcccccccCCHH
Confidence 7777 789999999999998 78889999999999987422 2445555555554458999999999966669999
Q ss_pred HHHHHHHHHHhC-CCceEEEEEcCCcc----CCC----CCcEEEeecCChhhh-hcCccceEEEeeCchhhHHHHHhcCc
Q psy2178 155 RRKAFLKAFARL-PQYRVLWKWENDVM----EGL----GENIRLQKWMPQQDI-LAHPKVKLFIMQGGLQSLQEAFHYGV 224 (357)
Q Consensus 155 ~~~~i~~al~~~-~~~~viw~~~~~~~----~~~----~~nv~~~~~~pq~~l-L~h~~~~~~ithgG~~s~~eal~~Gv 224 (357)
+..+++.+++++ +. .|+|+++++.. .+. ++|+...+|+||.++ |.|+++++||||||+||++|++++||
T Consensus 297 ~~~~l~~~l~~~~~~-~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~Gv 375 (496)
T KOG1192|consen 297 QKKELAKALESLQGV-TFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGV 375 (496)
T ss_pred HHHHHHHHHHhCCCc-eEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCC
Confidence 999999999999 55 89999987421 222 458999999999998 59999999999999999999999999
Q ss_pred eEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhccCC
Q psy2178 225 KLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGA 289 (357)
Q Consensus 225 P~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~ 289 (357)
|++++|+++||+.||+++++.|.|..+...+++.+++.+++.+++++++|+++|+++++.++++.
T Consensus 376 P~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~p 440 (496)
T KOG1192|consen 376 PMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILENEEYKEAAKRLSEILRDQP 440 (496)
T ss_pred ceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999988888877777777799999999999999999999999988764
No 5
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-38 Score=309.83 Aligned_cols=216 Identities=21% Similarity=0.384 Sum_probs=183.4
Q ss_pred CeeEEEEcCCCccccC----------CCCCCCeEEeCccccCCC----C----CCchHHHHHhccC-CCceEEEecCCcc
Q psy2178 86 KDSFMFSFDSRITGYA----------RPMQRKLVEVGPLHLVDP----K----PLDESLQKWMDGA-PEGVIYFSLGTNM 146 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~----------~~~~p~v~~vG~l~~~~~----~----~l~~~~~~~l~~~-~~~vv~vs~GS~~ 146 (357)
+++.+++||+.+||.. ++..|+++.|||++.... . +-+.+|.+||+++ ++++|||||||+.
T Consensus 205 ~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~ 284 (448)
T PLN02562 205 SLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWV 284 (448)
T ss_pred cCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccc
Confidence 5678999999999963 455689999999986431 1 1134578999998 4789999999986
Q ss_pred ccCCCcHHHHHHHHHHHHhCCCceEEEEEcCC---ccC-----CCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHH
Q psy2178 147 KGTSMGDFRRKAFLKAFARLPQYRVLWKWEND---VME-----GLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQE 218 (357)
Q Consensus 147 ~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~---~~~-----~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~e 218 (357)
. .++.+++++++.+|++.++ +|||+++.. .++ ..++|+++++|+||.++|+|+++++||||||+||++|
T Consensus 285 ~--~~~~~~~~~l~~~l~~~g~-~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~E 361 (448)
T PLN02562 285 S--PIGESNVRTLALALEASGR-PFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTME 361 (448)
T ss_pred c--CCCHHHHHHHHHHHHHCCC-CEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHH
Confidence 3 3689999999999999999 999998642 122 2468999999999999999999999999999999999
Q ss_pred HHhcCceEEeecCCCChHHHHHHHHH-hceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhccCCCcceEEEE
Q psy2178 219 AFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGAPEGVIYFS 297 (357)
Q Consensus 219 al~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~vi~~s 297 (357)
|+++|||+|++|+++||+.||+++++ +|+|+.+. +++.+++.++|+++|++++||+||++++++.++. .+
T Consensus 362 al~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~-~~------ 432 (448)
T PLN02562 362 AIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE-EA------ 432 (448)
T ss_pred HHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc-CC------
Confidence 99999999999999999999999987 58887774 6799999999999999999999999999887755 33
Q ss_pred eecccccCcCchHHHHHHHHHHc
Q psy2178 298 LGTNMKGTSMGDFRRKAFLKAFA 320 (357)
Q Consensus 298 lgs~~~g~s~~~~~~~~f~~~~~ 320 (357)
+|||..++. .|++.++
T Consensus 433 -----gGSS~~nl~--~~v~~~~ 448 (448)
T PLN02562 433 -----RLRSMMNFT--TLKDELK 448 (448)
T ss_pred -----CCCHHHHHH--HHHHHhC
Confidence 378888886 8888764
No 6
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-38 Score=308.79 Aligned_cols=215 Identities=20% Similarity=0.311 Sum_probs=180.0
Q ss_pred CeeEEEEcCCCccccC------CCCCCCeEEeCccccCCC--CCCchHHHHHhccC-CCceEEEecCCccccCCCcHHHH
Q psy2178 86 KDSFMFSFDSRITGYA------RPMQRKLVEVGPLHLVDP--KPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRR 156 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~------~~~~p~v~~vG~l~~~~~--~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~ 156 (357)
+++.+++||+.+||.. +++.|+++.|||++.... ++++++|.+|||.+ +++||||||||... ++.+++
T Consensus 193 ~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~---l~~~q~ 269 (442)
T PLN02208 193 SCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQII---LEKDQF 269 (442)
T ss_pred cCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHhcCCCCcEEEEecccccc---CCHHHH
Confidence 6789999999999953 556789999999987543 45788999999997 57999999999985 789989
Q ss_pred HHHHHHHHhCCCceEEEEEcCC----c-cCCCC---------CcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhc
Q psy2178 157 KAFLKAFARLPQYRVLWKWEND----V-MEGLG---------ENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHY 222 (357)
Q Consensus 157 ~~i~~al~~~~~~~viw~~~~~----~-~~~~~---------~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~ 222 (357)
.+++.+++..+. +++|.++.+ . ...+| .|+.+.+|+||.+||+||++++||||||+||++||+++
T Consensus 270 ~e~~~~l~~s~~-pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~ 348 (442)
T PLN02208 270 QELCLGMELTGL-PFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVS 348 (442)
T ss_pred HHHHHHHHhCCC-cEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHc
Confidence 999888776676 777777642 1 12244 68888899999999999999999999999999999999
Q ss_pred CceEEeecCCCChHHHHHHHHH-hceeeeeeccC---CCHHHHHHHHHHHhcCcc-----hhhccccchhhhccCCCcce
Q psy2178 223 GVKLICIPMFADQDLNCQRVGK-IKTGIVLEYED---LNEEIIFNALKLVLEDPQ-----VFKSGWMSLQKWMDGAPEGV 293 (357)
Q Consensus 223 GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~~---~~~~~l~~~i~~~l~~~~-----~~~~a~~l~~~~~~~~~~~v 293 (357)
|||+|++|+++||+.||+++++ +|+|+.++..+ ++++++.++|+++|++++ +|++|+++++.+.+
T Consensus 349 GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~------ 422 (442)
T PLN02208 349 DCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVS------ 422 (442)
T ss_pred CCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhc------
Confidence 9999999999999999999877 89999997544 899999999999997653 88888888777632
Q ss_pred EEEEeecccccCcCchHHHHHHHHHHcc
Q psy2178 294 IYFSLGTNMKGTSMGDFRRKAFLKAFAR 321 (357)
Q Consensus 294 i~~slgs~~~g~s~~~~~~~~f~~~~~~ 321 (357)
+|||..++. +|++.+++
T Consensus 423 ---------~gsS~~~l~--~~v~~l~~ 439 (442)
T PLN02208 423 ---------PGLLTGYVD--KFVEELQE 439 (442)
T ss_pred ---------CCcHHHHHH--HHHHHHHH
Confidence 267777775 88888765
No 7
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.7e-39 Score=315.70 Aligned_cols=219 Identities=20% Similarity=0.368 Sum_probs=185.3
Q ss_pred CeeEEEEcCCCccccC-----C---CCCCCeEEeCccc-cCCC-----CCCchHHHHHhccCC-CceEEEecCCccccCC
Q psy2178 86 KDSFMFSFDSRITGYA-----R---PMQRKLVEVGPLH-LVDP-----KPLDESLQKWMDGAP-EGVIYFSLGTNMKGTS 150 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~---~~~p~v~~vG~l~-~~~~-----~~l~~~~~~~l~~~~-~~vv~vs~GS~~~~~~ 150 (357)
.++.+++||+.+||.. . ...|+++.|||+. +... ...+++|.+|+++++ ++||||||||+..
T Consensus 210 ~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~--- 286 (481)
T PLN02554 210 EMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGG--- 286 (481)
T ss_pred cCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEecccccc---
Confidence 5778999999999853 1 1347899999993 3322 245678999999974 7899999999865
Q ss_pred CcHHHHHHHHHHHHhCCCceEEEEEcCCc-----------------cC-C----CCCcEEEeecCChhhhhcCccceEEE
Q psy2178 151 MGDFRRKAFLKAFARLPQYRVLWKWENDV-----------------ME-G----LGENIRLQKWMPQQDILAHPKVKLFI 208 (357)
Q Consensus 151 ~~~~~~~~i~~al~~~~~~~viw~~~~~~-----------------~~-~----~~~nv~~~~~~pq~~lL~h~~~~~~i 208 (357)
++.+++++++.+|+.+++ +|||++++.. ++ + .++|+++++|+||.+||+||++++||
T Consensus 287 ~~~~~~~~la~~l~~~~~-~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~Fv 365 (481)
T PLN02554 287 FSEEQAREIAIALERSGH-RFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFV 365 (481)
T ss_pred CCHHHHHHHHHHHHHcCC-CeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCccc
Confidence 788999999999999999 9999997510 11 1 35678899999999999999999999
Q ss_pred eeCchhhHHHHHhcCceEEeecCCCChHHHHH-HHHHhceeeeeec-----------cCCCHHHHHHHHHHHhc-Ccchh
Q psy2178 209 MQGGLQSLQEAFHYGVKLICIPMFADQDLNCQ-RVGKIKTGIVLEY-----------EDLNEEIIFNALKLVLE-DPQVF 275 (357)
Q Consensus 209 thgG~~s~~eal~~GvP~i~~P~~~dQ~~na~-~v~~~G~g~~l~~-----------~~~~~~~l~~~i~~~l~-~~~~~ 275 (357)
||||+||++||+++|||+|++|+++||+.||+ +++++|+|+.++. ..++++++.++|+++|+ +++||
T Consensus 366 tH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r 445 (481)
T PLN02554 366 THCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVR 445 (481)
T ss_pred ccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHH
Confidence 99999999999999999999999999999995 4677999999853 35799999999999996 78999
Q ss_pred hccccchhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHHcc
Q psy2178 276 KSGWMSLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR 321 (357)
Q Consensus 276 ~~a~~l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~ 321 (357)
++|+++++++++...+| |||..++. .|++.+++
T Consensus 446 ~~a~~l~~~~~~av~~g-----------Gss~~~l~--~lv~~~~~ 478 (481)
T PLN02554 446 KRVKEMSEKCHVALMDG-----------GSSHTALK--KFIQDVTK 478 (481)
T ss_pred HHHHHHHHHHHHHhcCC-----------ChHHHHHH--HHHHHHHh
Confidence 99999999999887665 78888886 88888764
No 8
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.5e-38 Score=308.35 Aligned_cols=219 Identities=25% Similarity=0.397 Sum_probs=186.4
Q ss_pred CeeEEEEcCCCccccC-----CC-CCCCeEEeCccccCC--CCCC---chHHHHHhccC-CCceEEEecCCccccCCCcH
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-MQRKLVEVGPLHLVD--PKPL---DESLQKWMDGA-PEGVIYFSLGTNMKGTSMGD 153 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~~p~v~~vG~l~~~~--~~~l---~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~ 153 (357)
.++.+++||+++||.. +. ..+++++|||++... ...+ ..+|.+|||++ +++||||||||... ++.
T Consensus 203 ~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~---~~~ 279 (451)
T PLN02410 203 TASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLAL---MEI 279 (451)
T ss_pred cCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEcccccc---CCH
Confidence 5778999999999954 22 346899999998542 1222 24589999997 48999999999986 789
Q ss_pred HHHHHHHHHHHhCCCceEEEEEcCCc---------cC-----CCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHH
Q psy2178 154 FRRKAFLKAFARLPQYRVLWKWENDV---------ME-----GLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEA 219 (357)
Q Consensus 154 ~~~~~i~~al~~~~~~~viw~~~~~~---------~~-----~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~ea 219 (357)
+++++++.+|+..++ +|||+++.+. ++ ..++|+++.+|+||.+||+|+++++||||||+||++||
T Consensus 280 ~q~~ela~gLe~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea 358 (451)
T PLN02410 280 NEVMETASGLDSSNQ-QFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLES 358 (451)
T ss_pred HHHHHHHHHHHhcCC-CeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHH
Confidence 999999999999999 9999998421 11 24588999999999999999999999999999999999
Q ss_pred HhcCceEEeecCCCChHHHHHHHHHh-ceeeeeeccCCCHHHHHHHHHHHhcCc---chhhccccchhhhccCCCcceEE
Q psy2178 220 FHYGVKLICIPMFADQDLNCQRVGKI-KTGIVLEYEDLNEEIIFNALKLVLEDP---QVFKSGWMSLQKWMDGAPEGVIY 295 (357)
Q Consensus 220 l~~GvP~i~~P~~~dQ~~na~~v~~~-G~g~~l~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~vi~ 295 (357)
+++|||+|++|+++||+.||+++++. |+|+.++ ..++++++.++|+++|.++ +||++|+++++.++.+..+|
T Consensus 359 ~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~g--- 434 (451)
T PLN02410 359 IGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISG--- 434 (451)
T ss_pred HHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCC---
Confidence 99999999999999999999999875 9999987 6789999999999999775 69999999998888876554
Q ss_pred EEeecccccCcCchHHHHHHHHHHccC
Q psy2178 296 FSLGTNMKGTSMGDFRRKAFLKAFARL 322 (357)
Q Consensus 296 ~slgs~~~g~s~~~~~~~~f~~~~~~l 322 (357)
|||..++. .|++.++.+
T Consensus 435 --------GsS~~~l~--~fv~~~~~~ 451 (451)
T PLN02410 435 --------GSSHNSLE--EFVHFMRTL 451 (451)
T ss_pred --------CCHHHHHH--HHHHHHHhC
Confidence 78888876 898887653
No 9
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=7.9e-38 Score=302.50 Aligned_cols=203 Identities=19% Similarity=0.281 Sum_probs=173.8
Q ss_pred CeeEEEEcCCCccccC-----CC-C-CCCeEEeCccccCCC---CC--CchHHHHHhccC-CCceEEEecCCccccCCCc
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-M-QRKLVEVGPLHLVDP---KP--LDESLQKWMDGA-PEGVIYFSLGTNMKGTSMG 152 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~-~p~v~~vG~l~~~~~---~~--l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~ 152 (357)
+++.+++||+++||.. ++ + .++++.|||+..... .. -+.+|.+|||++ +++||||||||... ++
T Consensus 208 ~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~---~~ 284 (451)
T PLN03004 208 KSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGL---FS 284 (451)
T ss_pred ccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEeccccc---CC
Confidence 5678999999999963 22 2 257999999974321 11 134699999998 58999999999965 89
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCC--------ccCC-CC---------CcEEEeecCChhhhhcCccceEEEeeCchh
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWEND--------VMEG-LG---------ENIRLQKWMPQQDILAHPKVKLFIMQGGLQ 214 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~--------~~~~-~~---------~nv~~~~~~pq~~lL~h~~~~~~ithgG~~ 214 (357)
.+++++++.+|+..++ +|||+++.+ .... +| .|+.+.+|+||.+||+|+++++||||||+|
T Consensus 285 ~~q~~ela~gL~~s~~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~n 363 (451)
T PLN03004 285 KEQVIEIAVGLEKSGQ-RFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWN 363 (451)
T ss_pred HHHHHHHHHHHHHCCC-CEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcch
Confidence 9999999999999999 999999853 1122 34 688899999999999999999999999999
Q ss_pred hHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeecc---CCCHHHHHHHHHHHhcCcchhhccccchhhhccCCC
Q psy2178 215 SLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEYE---DLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGAP 290 (357)
Q Consensus 215 s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~---~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~ 290 (357)
|++||+++|||+|++|+++||+.||+++++ +|+|+.++.. .++.++|.++|+++|++++||++|++++++.+....
T Consensus 364 S~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~Av~ 443 (451)
T PLN03004 364 SILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALT 443 (451)
T ss_pred HHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999986 7999999643 479999999999999999999999999998888766
Q ss_pred cc
Q psy2178 291 EG 292 (357)
Q Consensus 291 ~~ 292 (357)
+|
T Consensus 444 ~G 445 (451)
T PLN03004 444 ET 445 (451)
T ss_pred CC
Confidence 64
No 10
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1e-37 Score=303.34 Aligned_cols=222 Identities=19% Similarity=0.251 Sum_probs=182.2
Q ss_pred CeeEEEEcCCCccccC-----CC-------CCCCeEEeCccccCC-CCCCchHHHHHhccC-CCceEEEecCCccccCCC
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-------MQRKLVEVGPLHLVD-PKPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSM 151 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-------~~p~v~~vG~l~~~~-~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~ 151 (357)
+++.+++||+.+||.. +. ..++++.|||+.... ...-+++|.+|||++ +++||||||||... +
T Consensus 200 ~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~---l 276 (481)
T PLN02992 200 KADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGS---L 276 (481)
T ss_pred cCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcCCCcchHHHHHHHHcCCCCceEEEeeccccc---C
Confidence 5788999999999953 11 125699999997532 222345699999997 58999999999965 8
Q ss_pred cHHHHHHHHHHHHhCCCceEEEEEcCC------------------c--cCCCCC---------cEEEeecCChhhhhcCc
Q psy2178 152 GDFRRKAFLKAFARLPQYRVLWKWEND------------------V--MEGLGE---------NIRLQKWMPQQDILAHP 202 (357)
Q Consensus 152 ~~~~~~~i~~al~~~~~~~viw~~~~~------------------~--~~~~~~---------nv~~~~~~pq~~lL~h~ 202 (357)
+.+++++++.+|+.+++ +|||+++.. + ...+|+ ++.+.+|+||.+||+|+
T Consensus 277 ~~~q~~ela~gL~~s~~-~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~ 355 (481)
T PLN02992 277 SAKQLTELAWGLEMSQQ-RFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQ 355 (481)
T ss_pred CHHHHHHHHHHHHHcCC-CEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCc
Confidence 99999999999999999 999999631 0 012444 48888999999999999
Q ss_pred cceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHH-Hhceeeeeec--cCCCHHHHHHHHHHHhcCc---chhh
Q psy2178 203 KVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVG-KIKTGIVLEY--EDLNEEIIFNALKLVLEDP---QVFK 276 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~-~~G~g~~l~~--~~~~~~~l~~~i~~~l~~~---~~~~ 276 (357)
++++||||||+||++||+++|||+|++|+++||+.||++++ ++|+|+.++. ..++.+++.++|+++|.++ ++++
T Consensus 356 ~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~ 435 (481)
T PLN02992 356 AVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRR 435 (481)
T ss_pred ccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHH
Confidence 99999999999999999999999999999999999999995 7999999975 3489999999999999763 6788
Q ss_pred ccccchhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHHccC
Q psy2178 277 SGWMSLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL 322 (357)
Q Consensus 277 ~a~~l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~l 322 (357)
+|+++++..+...... -||||..+++ .|++.++++
T Consensus 436 ~a~~~~~~a~~Av~~~---------~GGSS~~~l~--~~v~~~~~~ 470 (481)
T PLN02992 436 KVKKLRDTAEMSLSID---------GGGVAHESLC--RVTKECQRF 470 (481)
T ss_pred HHHHHHHHHHHHhcCC---------CCCchHHHHH--HHHHHHHHH
Confidence 8888888777765210 1488888886 788877665
No 11
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.7e-37 Score=301.42 Aligned_cols=200 Identities=20% Similarity=0.338 Sum_probs=170.3
Q ss_pred CeeEEEEcCCCccccC-----CC-CCCCeEEeCccccC--C-C--CCC----chHHHHHhccC-CCceEEEecCCccccC
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-MQRKLVEVGPLHLV--D-P--KPL----DESLQKWMDGA-PEGVIYFSLGTNMKGT 149 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~~p~v~~vG~l~~~--~-~--~~l----~~~~~~~l~~~-~~~vv~vs~GS~~~~~ 149 (357)
+++.+++||+.+||.. +. ..++++.|||+... . . ... .++|.+|||++ +++||||||||...
T Consensus 213 ~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~-- 290 (472)
T PLN02670 213 GSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEAS-- 290 (472)
T ss_pred cCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEeccccc--
Confidence 4678999999999954 22 23679999999742 1 1 111 15799999998 58999999999985
Q ss_pred CCcHHHHHHHHHHHHhCCCceEEEEEcCC-c-----cCCCCCc---------EEEeecCChhhhhcCccceEEEeeCchh
Q psy2178 150 SMGDFRRKAFLKAFARLPQYRVLWKWEND-V-----MEGLGEN---------IRLQKWMPQQDILAHPKVKLFIMQGGLQ 214 (357)
Q Consensus 150 ~~~~~~~~~i~~al~~~~~~~viw~~~~~-~-----~~~~~~n---------v~~~~~~pq~~lL~h~~~~~~ithgG~~ 214 (357)
++.+++++++.+|+.+++ +|||++++. . ...+|++ +.+.+|+||.+||+|+++++||||||+|
T Consensus 291 -l~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwn 368 (472)
T PLN02670 291 -LRREEVTELALGLEKSET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWN 368 (472)
T ss_pred -CCHHHHHHHHHHHHHCCC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcc
Confidence 889999999999999999 999999852 1 1123433 6778999999999999999999999999
Q ss_pred hHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeecc----CCCHHHHHHHHHHHhcCc---chhhccccchhhhcc
Q psy2178 215 SLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYE----DLNEEIIFNALKLVLEDP---QVFKSGWMSLQKWMD 287 (357)
Q Consensus 215 s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~----~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~ 287 (357)
|++||+++|||+|++|+++||+.||++++++|+|+.+... .++.+++.++|+++|.++ +||+||+++++.+++
T Consensus 369 S~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~ 448 (472)
T PLN02670 369 SVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD 448 (472)
T ss_pred hHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999998642 389999999999999876 799999999999998
Q ss_pred CC
Q psy2178 288 GA 289 (357)
Q Consensus 288 ~~ 289 (357)
+.
T Consensus 449 ~~ 450 (472)
T PLN02670 449 MD 450 (472)
T ss_pred cc
Confidence 75
No 12
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.8e-38 Score=305.92 Aligned_cols=219 Identities=21% Similarity=0.349 Sum_probs=182.3
Q ss_pred CeeEEEEcCCCccccC-----CCC---CCCeEEeCccccCCC---CCCc----hHHHHHhccCC-CceEEEecCCccccC
Q psy2178 86 KDSFMFSFDSRITGYA-----RPM---QRKLVEVGPLHLVDP---KPLD----ESLQKWMDGAP-EGVIYFSLGTNMKGT 149 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~---~p~v~~vG~l~~~~~---~~l~----~~~~~~l~~~~-~~vv~vs~GS~~~~~ 149 (357)
+++.+++||+.+||.. +.. .|+++.|||+++... ..++ ++|.+||+.++ ++||||||||+..
T Consensus 215 ~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~-- 292 (475)
T PLN02167 215 EAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGS-- 292 (475)
T ss_pred ccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeeccccc--
Confidence 5789999999999964 111 368999999986321 1222 57999999974 7999999999965
Q ss_pred CCcHHHHHHHHHHHHhCCCceEEEEEcCCc------cCCCCC--------cEEEeecCChhhhhcCccceEEEeeCchhh
Q psy2178 150 SMGDFRRKAFLKAFARLPQYRVLWKWENDV------MEGLGE--------NIRLQKWMPQQDILAHPKVKLFIMQGGLQS 215 (357)
Q Consensus 150 ~~~~~~~~~i~~al~~~~~~~viw~~~~~~------~~~~~~--------nv~~~~~~pq~~lL~h~~~~~~ithgG~~s 215 (357)
++.+++++++.+|+..+. +|||+++.+. ...+|+ ++++++|+||.+||+|+++++||||||+||
T Consensus 293 -~~~~~~~ela~~l~~~~~-~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS 370 (475)
T PLN02167 293 -LPAPQIKEIAQALELVGC-RFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNS 370 (475)
T ss_pred -CCHHHHHHHHHHHHhCCC-cEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCccc
Confidence 788999999999999999 9999987421 112343 357889999999999999999999999999
Q ss_pred HHHHHhcCceEEeecCCCChHHHHHH-HHHhceeeeeec-------cCCCHHHHHHHHHHHhcCc-chhhccccchhhhc
Q psy2178 216 LQEAFHYGVKLICIPMFADQDLNCQR-VGKIKTGIVLEY-------EDLNEEIIFNALKLVLEDP-QVFKSGWMSLQKWM 286 (357)
Q Consensus 216 ~~eal~~GvP~i~~P~~~dQ~~na~~-v~~~G~g~~l~~-------~~~~~~~l~~~i~~~l~~~-~~~~~a~~l~~~~~ 286 (357)
++||+++|||+|++|+++||+.||++ ++++|+|+.+.. ..++++++.++|+++|.++ +||++|+++++..+
T Consensus 371 ~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~ 450 (475)
T PLN02167 371 VLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAAR 450 (475)
T ss_pred HHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 567999998853 2469999999999999765 89999999999998
Q ss_pred cCCCcceEEEEeecccccCcCchHHHHHHHHHHcc
Q psy2178 287 DGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR 321 (357)
Q Consensus 287 ~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~ 321 (357)
+...+| |||..++. +|++.+++
T Consensus 451 ~av~~g-----------GsS~~~l~--~~v~~i~~ 472 (475)
T PLN02167 451 KAVMDG-----------GSSFVAVK--RFIDDLLG 472 (475)
T ss_pred HHHhCC-----------CcHHHHHH--HHHHHHHh
Confidence 876664 78888886 89887754
No 13
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.6e-37 Score=301.02 Aligned_cols=219 Identities=23% Similarity=0.378 Sum_probs=184.8
Q ss_pred CeeEEEEcCCCccccC-----CCCCCCeEEeCccccCC----C------CCCchHHHHHhccCC-CceEEEecCCccccC
Q psy2178 86 KDSFMFSFDSRITGYA-----RPMQRKLVEVGPLHLVD----P------KPLDESLQKWMDGAP-EGVIYFSLGTNMKGT 149 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~~p~v~~vG~l~~~~----~------~~l~~~~~~~l~~~~-~~vv~vs~GS~~~~~ 149 (357)
.++.+++||+.+||.. +...| ++.|||+.... . ...+++|.+||++++ ++||||||||+..
T Consensus 213 ~a~~vlvNTf~eLE~~~~~~l~~~~~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~-- 289 (480)
T PLN02555 213 KPFCILIDTFQELEKEIIDYMSKLCP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVY-- 289 (480)
T ss_pred cCCEEEEEchHHHhHHHHHHHhhCCC-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccccC--
Confidence 5778999999999954 22234 99999996421 1 123467999999984 7899999999985
Q ss_pred CCcHHHHHHHHHHHHhCCCceEEEEEcCC---------cc-----CCCCCcEEEeecCChhhhhcCccceEEEeeCchhh
Q psy2178 150 SMGDFRRKAFLKAFARLPQYRVLWKWEND---------VM-----EGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQS 215 (357)
Q Consensus 150 ~~~~~~~~~i~~al~~~~~~~viw~~~~~---------~~-----~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s 215 (357)
++.+++.+++.+|+..++ +|||+++.. .+ ...++|+++++|+||.+||+||++++||||||+||
T Consensus 290 -~~~~q~~ela~~l~~~~~-~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS 367 (480)
T PLN02555 290 -LKQEQIDEIAYGVLNSGV-SFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNS 367 (480)
T ss_pred -CCHHHHHHHHHHHHhcCC-eEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcch
Confidence 789999999999999999 999998631 01 12357899999999999999999999999999999
Q ss_pred HHHHHhcCceEEeecCCCChHHHHHHHHHh-ceeeeee-----ccCCCHHHHHHHHHHHhcC---cchhhccccchhhhc
Q psy2178 216 LQEAFHYGVKLICIPMFADQDLNCQRVGKI-KTGIVLE-----YEDLNEEIIFNALKLVLED---PQVFKSGWMSLQKWM 286 (357)
Q Consensus 216 ~~eal~~GvP~i~~P~~~dQ~~na~~v~~~-G~g~~l~-----~~~~~~~~l~~~i~~~l~~---~~~~~~a~~l~~~~~ 286 (357)
++||+++|||+|++|+++||+.||+++++. |+|+.+. ...++.+++.++|+++|++ .++|+||++++++.+
T Consensus 368 ~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~ 447 (480)
T PLN02555 368 TMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAE 447 (480)
T ss_pred HHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999985 9999993 3458999999999999965 479999999999988
Q ss_pred cCCCcceEEEEeecccccCcCchHHHHHHHHHHccC
Q psy2178 287 DGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL 322 (357)
Q Consensus 287 ~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~l 322 (357)
++..+| |||..++. .|++.+++=
T Consensus 448 ~A~~eg-----------GSS~~~l~--~~v~~i~~~ 470 (480)
T PLN02555 448 AAVAEG-----------GSSDRNFQ--EFVDKLVRK 470 (480)
T ss_pred HHhcCC-----------CcHHHHHH--HHHHHHHhc
Confidence 877664 88888886 899888653
No 14
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.9e-37 Score=298.61 Aligned_cols=217 Identities=17% Similarity=0.268 Sum_probs=180.6
Q ss_pred CeeEEEEcCCCccccC-----CCC-------CCCeEEeCccccCC-CCCCchHHHHHhccC-CCceEEEecCCccccCCC
Q psy2178 86 KDSFMFSFDSRITGYA-----RPM-------QRKLVEVGPLHLVD-PKPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSM 151 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~-------~p~v~~vG~l~~~~-~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~ 151 (357)
+++.+++||+++||.. +.. .+.++.|||+.... ....+++|.+|||++ +++||||||||... +
T Consensus 204 ~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~---~ 280 (470)
T PLN03015 204 MSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGT---L 280 (470)
T ss_pred cCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCc---C
Confidence 6889999999999953 221 25699999997432 112235799999997 58999999999975 8
Q ss_pred cHHHHHHHHHHHHhCCCceEEEEEcCC------------ccC-CCCCc---------EEEeecCChhhhhcCccceEEEe
Q psy2178 152 GDFRRKAFLKAFARLPQYRVLWKWEND------------VME-GLGEN---------IRLQKWMPQQDILAHPKVKLFIM 209 (357)
Q Consensus 152 ~~~~~~~i~~al~~~~~~~viw~~~~~------------~~~-~~~~n---------v~~~~~~pq~~lL~h~~~~~~it 209 (357)
+.+++++++.+|+..++ +|||+++.. ... .+|+| +.+.+|+||.++|+|+++++|||
T Consensus 281 ~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvt 359 (470)
T PLN03015 281 TFEQTVELAWGLELSGQ-RFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLS 359 (470)
T ss_pred CHHHHHHHHHHHHhCCC-cEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEe
Confidence 99999999999999999 999999631 111 24545 67789999999999999999999
Q ss_pred eCchhhHHHHHhcCceEEeecCCCChHHHHHHHH-Hhceeeeee----ccCCCHHHHHHHHHHHhc-----Ccchhhccc
Q psy2178 210 QGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVG-KIKTGIVLE----YEDLNEEIIFNALKLVLE-----DPQVFKSGW 279 (357)
Q Consensus 210 hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~-~~G~g~~l~----~~~~~~~~l~~~i~~~l~-----~~~~~~~a~ 279 (357)
|||+||++||+++|||++++|+++||+.||++++ .+|+|+.+. ...++++++.++|+++|. +.++|+||+
T Consensus 360 H~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~ 439 (470)
T PLN03015 360 HCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAE 439 (470)
T ss_pred cCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHH
Confidence 9999999999999999999999999999999995 589999985 235899999999999994 247999999
Q ss_pred cchhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHH
Q psy2178 280 MSLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAF 319 (357)
Q Consensus 280 ~l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~ 319 (357)
+++++.+++..+| |||..++. .|++..
T Consensus 440 ~lk~~a~~Av~eG-----------GSS~~nl~--~~~~~~ 466 (470)
T PLN03015 440 EVRVSSERAWSHG-----------GSSYNSLF--EWAKRC 466 (470)
T ss_pred HHHHHHHHHhcCC-----------CcHHHHHH--HHHHhc
Confidence 9999888876654 88888886 777654
No 15
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.3e-36 Score=295.86 Aligned_cols=217 Identities=18% Similarity=0.320 Sum_probs=182.2
Q ss_pred CeeEEEEcCCCccccC-----CCCCCCeEEeCccccC----C-CC-----------CCchHHHHHhccC-CCceEEEecC
Q psy2178 86 KDSFMFSFDSRITGYA-----RPMQRKLVEVGPLHLV----D-PK-----------PLDESLQKWMDGA-PEGVIYFSLG 143 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~~p~v~~vG~l~~~----~-~~-----------~l~~~~~~~l~~~-~~~vv~vs~G 143 (357)
.++.+++||+.+||.. +.. +++++|||++.. . .. ..+++|.+|++++ +++|||||||
T Consensus 199 ~~~~vlvNTf~eLE~~~~~~l~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfG 277 (456)
T PLN02210 199 YVKWVLVNSFYELESEIIESMADL-KPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFG 277 (456)
T ss_pred cCCEEEEeCHHHHhHHHHHHHhhc-CCEEEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEec
Confidence 5678999999999954 222 579999999731 1 10 1245689999997 4799999999
Q ss_pred CccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc----cC---C-C-CCcEEEeecCChhhhhcCccceEEEeeCchh
Q psy2178 144 TNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV----ME---G-L-GENIRLQKWMPQQDILAHPKVKLFIMQGGLQ 214 (357)
Q Consensus 144 S~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~----~~---~-~-~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~ 214 (357)
|... .+.+++++++.+|+..+. +|||+++... .. + . +++..+++|+||.+||+|+++++||||||+|
T Consensus 278 S~~~---~~~~~~~e~a~~l~~~~~-~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~n 353 (456)
T PLN02210 278 SMLE---SLENQVETIAKALKNRGV-PFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWN 353 (456)
T ss_pred cccc---CCHHHHHHHHHHHHhCCC-CEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcc
Confidence 9886 678999999999999999 9999987532 11 1 1 3667889999999999999999999999999
Q ss_pred hHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeec----cCCCHHHHHHHHHHHhcCcc---hhhccccchhhhc
Q psy2178 215 SLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEY----EDLNEEIIFNALKLVLEDPQ---VFKSGWMSLQKWM 286 (357)
Q Consensus 215 s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~----~~~~~~~l~~~i~~~l~~~~---~~~~a~~l~~~~~ 286 (357)
|++||+++|||+|++|+++||+.||+++++ +|+|+.+.. ..++.++|.++|+++|.+++ +|+||+++++..+
T Consensus 354 S~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~ 433 (456)
T PLN02210 354 STIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVAR 433 (456)
T ss_pred cHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998 899999853 25899999999999998764 9999999999988
Q ss_pred cCCCcceEEEEeecccccCcCchHHHHHHHHHHc
Q psy2178 287 DGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFA 320 (357)
Q Consensus 287 ~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~ 320 (357)
.+..+| |||..+++ .|++.++
T Consensus 434 ~Av~~g-----------GSS~~~l~--~~v~~~~ 454 (456)
T PLN02210 434 LALAPG-----------GSSARNLD--LFISDIT 454 (456)
T ss_pred HHhcCC-----------CcHHHHHH--HHHHHHh
Confidence 877664 88888886 7887654
No 16
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=6.9e-37 Score=296.25 Aligned_cols=216 Identities=24% Similarity=0.374 Sum_probs=178.5
Q ss_pred eeEEEEcCCCccccC--CCC-CCCeEEeCccccCC----C---C-----CCchHHHHHhccCC-CceEEEecCCccccCC
Q psy2178 87 DSFMFSFDSRITGYA--RPM-QRKLVEVGPLHLVD----P---K-----PLDESLQKWMDGAP-EGVIYFSLGTNMKGTS 150 (357)
Q Consensus 87 ~~~~l~~s~~~l~~~--~~~-~p~v~~vG~l~~~~----~---~-----~l~~~~~~~l~~~~-~~vv~vs~GS~~~~~~ 150 (357)
++.+++||+++||.. ..+ ...++.|||+.... . . .-+.+|.+|||+++ ++||||||||...
T Consensus 197 ~~~vlvNTf~eLE~~~~~~l~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~--- 273 (455)
T PLN02152 197 NPKILVNTFDSLEPEFLTAIPNIEMVAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVE--- 273 (455)
T ss_pred CCEEEEeChHHhhHHHHHhhhcCCEEEEcccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEeccccc---
Confidence 358999999999954 112 12599999997421 0 1 11347999999974 7999999999985
Q ss_pred CcHHHHHHHHHHHHhCCCceEEEEEcCC---------c-------cC----CCCCcEEEeecCChhhhhcCccceEEEee
Q psy2178 151 MGDFRRKAFLKAFARLPQYRVLWKWEND---------V-------ME----GLGENIRLQKWMPQQDILAHPKVKLFIMQ 210 (357)
Q Consensus 151 ~~~~~~~~i~~al~~~~~~~viw~~~~~---------~-------~~----~~~~nv~~~~~~pq~~lL~h~~~~~~ith 210 (357)
++.+++++++.+|+.+++ +|||++++. . .+ ..++|+++.+|+||.+||+|+++++||||
T Consensus 274 l~~~q~~ela~gL~~s~~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH 352 (455)
T PLN02152 274 LSKKQIEELARALIEGKR-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTH 352 (455)
T ss_pred CCHHHHHHHHHHHHHcCC-CeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEee
Confidence 899999999999999999 999998752 0 11 14678899999999999999999999999
Q ss_pred CchhhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeee--cc-CCCHHHHHHHHHHHhcCc--chhhccccchhh
Q psy2178 211 GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLE--YE-DLNEEIIFNALKLVLEDP--QVFKSGWMSLQK 284 (357)
Q Consensus 211 gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~--~~-~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~ 284 (357)
||+||++||+++|||+|++|+++||+.||+++++ +|+|+.+. .. .++.++|.++|+++|+++ ++|++|++++++
T Consensus 353 ~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~ 432 (455)
T PLN02152 353 CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRL 432 (455)
T ss_pred CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 46666653 23 368999999999999765 489999999999
Q ss_pred hccCCCcceEEEEeecccccCcCchHHHHHHHHHH
Q psy2178 285 WMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAF 319 (357)
Q Consensus 285 ~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~ 319 (357)
.++...+| |||..++. .|++.+
T Consensus 433 ~~~a~~~g-----------gsS~~nl~--~li~~i 454 (455)
T PLN02152 433 AIEAGGEG-----------GSSDKNVE--AFVKTL 454 (455)
T ss_pred HHHHHcCC-----------CcHHHHHH--HHHHHh
Confidence 88876654 88888886 788765
No 17
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=9.6e-37 Score=299.67 Aligned_cols=221 Identities=21% Similarity=0.332 Sum_probs=182.6
Q ss_pred CeeEEEEcCCCccccC-----CC-CCCCeEEeCccccCCC---------CC---CchHHHHHhccC-CCceEEEecCCcc
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-MQRKLVEVGPLHLVDP---------KP---LDESLQKWMDGA-PEGVIYFSLGTNM 146 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~~p~v~~vG~l~~~~~---------~~---l~~~~~~~l~~~-~~~vv~vs~GS~~ 146 (357)
+++.+++||+++||.. +. ....+++|||+..... +. .+++|.+|++.+ +++||||||||+.
T Consensus 217 ~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~ 296 (482)
T PLN03007 217 KSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVA 296 (482)
T ss_pred cCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCc
Confidence 6779999999999865 22 2256999999764211 11 146799999997 5899999999997
Q ss_pred ccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc--------cCC------CCCcEEEeecCChhhhhcCccceEEEeeCc
Q psy2178 147 KGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--------MEG------LGENIRLQKWMPQQDILAHPKVKLFIMQGG 212 (357)
Q Consensus 147 ~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~--------~~~------~~~nv~~~~~~pq~~lL~h~~~~~~ithgG 212 (357)
. ++.+++.+++++|+..+. +|||+++... +++ .+.|+++.+|+||.+||+|+++++||||||
T Consensus 297 ~---~~~~~~~~~~~~l~~~~~-~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G 372 (482)
T PLN03007 297 S---FKNEQLFEIAAGLEGSGQ-NFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCG 372 (482)
T ss_pred C---CCHHHHHHHHHHHHHCCC-CEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCc
Confidence 5 678899999999999999 9999988521 121 255889999999999999999999999999
Q ss_pred hhhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeee--------eccCCCHHHHHHHHHHHhcCc---chhhcccc
Q psy2178 213 LQSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVL--------EYEDLNEEIIFNALKLVLEDP---QVFKSGWM 280 (357)
Q Consensus 213 ~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l--------~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~ 280 (357)
+||++||+++|||+|++|+++||+.||+++++ +++|+.+ +...++.++|.++|+++|.++ +||++|++
T Consensus 373 ~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~ 452 (482)
T PLN03007 373 WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKK 452 (482)
T ss_pred chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 99999999999999999999999999998875 3444443 334579999999999999887 89999999
Q ss_pred chhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHHccCC
Q psy2178 281 SLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP 323 (357)
Q Consensus 281 l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp 323 (357)
+++..+++..+| |||..++. .|++.+++++
T Consensus 453 ~~~~a~~a~~~g-----------GsS~~~l~--~~v~~~~~~~ 482 (482)
T PLN03007 453 LAEMAKAAVEEG-----------GSSFNDLN--KFMEELNSRK 482 (482)
T ss_pred HHHHHHHHHhCC-----------CcHHHHHH--HHHHHHHhcC
Confidence 999988876554 88999886 8999988763
No 18
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.9e-36 Score=295.13 Aligned_cols=219 Identities=17% Similarity=0.303 Sum_probs=178.9
Q ss_pred CeeEEEEcCCCccccC-----CCC-------CCCeEEeCccccCC----CCCCchHHHHHhccC-CCceEEEecCCcccc
Q psy2178 86 KDSFMFSFDSRITGYA-----RPM-------QRKLVEVGPLHLVD----PKPLDESLQKWMDGA-PEGVIYFSLGTNMKG 148 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~-------~p~v~~vG~l~~~~----~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~ 148 (357)
+++.+++||+++||.. +.. .|+++.|||++... ....+++|.+||+++ +++||||||||...
T Consensus 206 ~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~- 284 (480)
T PLN00164 206 EAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGF- 284 (480)
T ss_pred hcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEeccccc-
Confidence 5778999999999953 211 25799999997421 122356799999998 57999999999865
Q ss_pred CCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc------------CCCCCc---------EEEeecCChhhhhcCccceEE
Q psy2178 149 TSMGDFRRKAFLKAFARLPQYRVLWKWENDVM------------EGLGEN---------IRLQKWMPQQDILAHPKVKLF 207 (357)
Q Consensus 149 ~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~------------~~~~~n---------v~~~~~~pq~~lL~h~~~~~~ 207 (357)
++.+++++++.+|+..++ +|||+++.... ..+|++ +.+.+|+||.+||+|+++++|
T Consensus 285 --~~~~q~~ela~gL~~s~~-~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~f 361 (480)
T PLN00164 285 --FDAPQVREIAAGLERSGH-RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGF 361 (480)
T ss_pred --CCHHHHHHHHHHHHHcCC-CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeE
Confidence 788999999999999999 99999874210 013333 667799999999999999999
Q ss_pred EeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeecc-----CCCHHHHHHHHHHHhcCcc-----hhh
Q psy2178 208 IMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEYE-----DLNEEIIFNALKLVLEDPQ-----VFK 276 (357)
Q Consensus 208 ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~-----~~~~~~l~~~i~~~l~~~~-----~~~ 276 (357)
||||||||++||+++|||+|++|+++||+.||+++++ +|+|+.+... .+++++|.++|+++|.+++ +|+
T Consensus 362 vtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~ 441 (480)
T PLN00164 362 VTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKARE 441 (480)
T ss_pred EeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHH
Confidence 9999999999999999999999999999999998865 7999988521 3689999999999997643 688
Q ss_pred ccccchhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHHcc
Q psy2178 277 SGWMSLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR 321 (357)
Q Consensus 277 ~a~~l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~ 321 (357)
+|++++++.+++..+| |||..++. .|++.+++
T Consensus 442 ~a~~~~~~~~~a~~~g-----------GSS~~~l~--~~v~~~~~ 473 (480)
T PLN00164 442 KAAEMKAACRKAVEEG-----------GSSYAALQ--RLAREIRH 473 (480)
T ss_pred HHHHHHHHHHHHhcCC-----------CcHHHHHH--HHHHHHHh
Confidence 8888888777766554 78888886 88888754
No 19
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=2e-36 Score=295.50 Aligned_cols=221 Identities=18% Similarity=0.285 Sum_probs=184.1
Q ss_pred CeeEEEEcCCCccccC-----CC-CC-CCeEEeCccccCCC---------C--C-CchHHHHHhccC-CCceEEEecCCc
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-MQ-RKLVEVGPLHLVDP---------K--P-LDESLQKWMDGA-PEGVIYFSLGTN 145 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~~-p~v~~vG~l~~~~~---------~--~-l~~~~~~~l~~~-~~~vv~vs~GS~ 145 (357)
.++.+++||+.+||.. +. +. ++++.|||+..... . . -+++|.+||+.+ +++||||||||.
T Consensus 214 ~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~ 293 (477)
T PLN02863 214 ASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQ 293 (477)
T ss_pred cCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeece
Confidence 3567999999999954 22 22 67999999974221 0 1 135799999997 479999999999
Q ss_pred cccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-----cCCCC---------CcEEEeecCChhhhhcCccceEEEeeC
Q psy2178 146 MKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-----MEGLG---------ENIRLQKWMPQQDILAHPKVKLFIMQG 211 (357)
Q Consensus 146 ~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-----~~~~~---------~nv~~~~~~pq~~lL~h~~~~~~ithg 211 (357)
.. ++.+++++++.+|++.+. +|||+++... ...+| .++++.+|+||.++|.|+++++|||||
T Consensus 294 ~~---~~~~~~~ela~gL~~~~~-~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~ 369 (477)
T PLN02863 294 VV---LTKEQMEALASGLEKSGV-HFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHC 369 (477)
T ss_pred ec---CCHHHHHHHHHHHHhCCC-cEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecC
Confidence 86 788999999999999999 9999997421 11223 457788999999999999999999999
Q ss_pred chhhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeec---cCCCHHHHHHHHHHHh-cCcchhhccccchhhhc
Q psy2178 212 GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEY---EDLNEEIIFNALKLVL-EDPQVFKSGWMSLQKWM 286 (357)
Q Consensus 212 G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~---~~~~~~~l~~~i~~~l-~~~~~~~~a~~l~~~~~ 286 (357)
|+||++||+++|||+|++|+++||+.||+++++ +|+|+.+.. ..++.+++.++++++| ++++||+||++++++.+
T Consensus 370 G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~ 449 (477)
T PLN02863 370 GWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAAL 449 (477)
T ss_pred CchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999875 799998843 2358899999999998 67899999999999988
Q ss_pred cCCCcceEEEEeecccccCcCchHHHHHHHHHHccCC
Q psy2178 287 DGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP 323 (357)
Q Consensus 287 ~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp 323 (357)
++..+| |||..+++ +|++.++++.
T Consensus 450 ~Av~~g-----------GSS~~~l~--~~v~~i~~~~ 473 (477)
T PLN02863 450 DAIKER-----------GSSVKDLD--GFVKHVVELG 473 (477)
T ss_pred HHhccC-----------CcHHHHHH--HHHHHHHHhc
Confidence 876654 78888886 8999988764
No 20
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=3.1e-36 Score=290.63 Aligned_cols=217 Identities=20% Similarity=0.328 Sum_probs=177.7
Q ss_pred CeeEEEEcCCCccccC-----CCC-CCCeEEeCccccCC--CCCCchHHHHHhccC-CCceEEEecCCccccCCCcHHHH
Q psy2178 86 KDSFMFSFDSRITGYA-----RPM-QRKLVEVGPLHLVD--PKPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRR 156 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~-~p~v~~vG~l~~~~--~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~ 156 (357)
+++.+++||+.+||.. +.. .++++.|||+.... ....+++|.+|||++ +++||||||||... ++.+++
T Consensus 199 ~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~---~~~~q~ 275 (453)
T PLN02764 199 NSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVI---LEKDQF 275 (453)
T ss_pred cCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccccccchhHHHHHHhCCCCCceEEEeeccccc---CCHHHH
Confidence 5678999999999954 222 36799999997532 122356899999998 69999999999986 789999
Q ss_pred HHHHHHHHhCCCceEEEEEcCCc-----cCCC---------CCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhc
Q psy2178 157 KAFLKAFARLPQYRVLWKWENDV-----MEGL---------GENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHY 222 (357)
Q Consensus 157 ~~i~~al~~~~~~~viw~~~~~~-----~~~~---------~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~ 222 (357)
.+++.+|+..+. +|+|+++... ...+ ..++.+.+|+||.+||+|+++++||||||+||++||+++
T Consensus 276 ~ela~gL~~s~~-pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~ 354 (453)
T PLN02764 276 QELCLGMELTGS-PFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLS 354 (453)
T ss_pred HHHHHHHHhCCC-CeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHc
Confidence 999999999999 9999998421 1112 234566699999999999999999999999999999999
Q ss_pred CceEEeecCCCChHHHHHHHHH-hceeeeeecc---CCCHHHHHHHHHHHhcCcc-----hhhccccchhhhccCCCcce
Q psy2178 223 GVKLICIPMFADQDLNCQRVGK-IKTGIVLEYE---DLNEEIIFNALKLVLEDPQ-----VFKSGWMSLQKWMDGAPEGV 293 (357)
Q Consensus 223 GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~---~~~~~~l~~~i~~~l~~~~-----~~~~a~~l~~~~~~~~~~~v 293 (357)
|||+|++|+++||+.||+++++ +|+|+.+..+ .++.+++.++++++|++++ +|++|+++++.+++
T Consensus 355 GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~------ 428 (453)
T PLN02764 355 DCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS------ 428 (453)
T ss_pred CCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh------
Confidence 9999999999999999999975 8999887432 5899999999999997742 77788877777643
Q ss_pred EEEEeecccccCcCchHHHHHHHHHHccCC
Q psy2178 294 IYFSLGTNMKGTSMGDFRRKAFLKAFARLP 323 (357)
Q Consensus 294 i~~slgs~~~g~s~~~~~~~~f~~~~~~lp 323 (357)
+|||..++. +|++.+.++-
T Consensus 429 ---------~GSS~~~l~--~lv~~~~~~~ 447 (453)
T PLN02764 429 ---------PGLLTGYVD--NFIESLQDLV 447 (453)
T ss_pred ---------cCCHHHHHH--HHHHHHHHhc
Confidence 267777776 8988887764
No 21
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.1e-35 Score=287.31 Aligned_cols=214 Identities=19% Similarity=0.328 Sum_probs=176.1
Q ss_pred CeeEEEEcCCCccccC-----CCCCCCeEEeCccccC--------CCC---------CCchHHHHHhccC-CCceEEEec
Q psy2178 86 KDSFMFSFDSRITGYA-----RPMQRKLVEVGPLHLV--------DPK---------PLDESLQKWMDGA-PEGVIYFSL 142 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~~~p~v~~vG~l~~~--------~~~---------~l~~~~~~~l~~~-~~~vv~vs~ 142 (357)
+++.+++||+++||.. +.. ++++.|||++.. ... ..+++|.+||+.+ +++||||||
T Consensus 193 ~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsf 271 (449)
T PLN02173 193 KADFVLVNSFHDLDLHENELLSKV-CPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAF 271 (449)
T ss_pred cCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEe
Confidence 5788999999999954 222 469999999731 000 1134599999997 478999999
Q ss_pred CCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---cC-C----C-CCcEEEeecCChhhhhcCccceEEEeeCch
Q psy2178 143 GTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---ME-G----L-GENIRLQKWMPQQDILAHPKVKLFIMQGGL 213 (357)
Q Consensus 143 GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---~~-~----~-~~nv~~~~~~pq~~lL~h~~~~~~ithgG~ 213 (357)
||... ++.+++++++.+| .+. +|+|+++.+. ++ + . ++|+++.+|+||.+||+|+++++||||||+
T Consensus 272 GS~~~---~~~~~~~ela~gL--s~~-~flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGw 345 (449)
T PLN02173 272 GSMAK---LSSEQMEEIASAI--SNF-SYLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGW 345 (449)
T ss_pred ccccc---CCHHHHHHHHHHh--cCC-CEEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCcc
Confidence 99885 7899999999999 566 8999997421 21 1 1 578999999999999999999999999999
Q ss_pred hhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeecc----CCCHHHHHHHHHHHhcCc---chhhccccchhhh
Q psy2178 214 QSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEYE----DLNEEIIFNALKLVLEDP---QVFKSGWMSLQKW 285 (357)
Q Consensus 214 ~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~----~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~ 285 (357)
||++||+++|||+|++|+++||+.||+++++ +|+|+.+... .++.+++.++++++|.++ ++|++|++++++.
T Consensus 346 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a 425 (449)
T PLN02173 346 NSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLA 425 (449)
T ss_pred chHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 4999887532 258999999999999764 5788999998888
Q ss_pred ccCCCcceEEEEeecccccCcCchHHHHHHHHHH
Q psy2178 286 MDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAF 319 (357)
Q Consensus 286 ~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~ 319 (357)
+....+| |||..++. .|++.+
T Consensus 426 ~~Av~~g-----------GSS~~~l~--~~v~~~ 446 (449)
T PLN02173 426 VKSLSEG-----------GSTDININ--TFVSKI 446 (449)
T ss_pred HHHhcCC-----------CcHHHHHH--HHHHHh
Confidence 8776554 78888876 788775
No 22
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.4e-35 Score=289.87 Aligned_cols=219 Identities=19% Similarity=0.288 Sum_probs=183.3
Q ss_pred CeeEEEEcCCCccccC-----CC-CCCCeEEeCccccCC--C---C-----CCchHHHHHhccC-CCceEEEecCCcccc
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-MQRKLVEVGPLHLVD--P---K-----PLDESLQKWMDGA-PEGVIYFSLGTNMKG 148 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~~p~v~~vG~l~~~~--~---~-----~l~~~~~~~l~~~-~~~vv~vs~GS~~~~ 148 (357)
+++.+++||+++||.. +. .+++++.|||+.... . . ..+.++.+|++.+ ++++|||||||...
T Consensus 208 ~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~- 286 (459)
T PLN02448 208 KAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLS- 286 (459)
T ss_pred cCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeeccccc-
Confidence 4578999999999965 22 345799999996421 0 0 1124799999997 58899999999975
Q ss_pred CCCcHHHHHHHHHHHHhCCCceEEEEEcCC--ccCC-CCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCce
Q psy2178 149 TSMGDFRRKAFLKAFARLPQYRVLWKWEND--VMEG-LGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVK 225 (357)
Q Consensus 149 ~~~~~~~~~~i~~al~~~~~~~viw~~~~~--~~~~-~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP 225 (357)
++.+++++++++|+..+. +|||+++++ .+.+ .++|+++.+|+||.+||.|+++++||||||+||++||+++|||
T Consensus 287 --~~~~~~~~~~~~l~~~~~-~~lw~~~~~~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP 363 (459)
T PLN02448 287 --VSSAQMDEIAAGLRDSGV-RFLWVARGEASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVP 363 (459)
T ss_pred --CCHHHHHHHHHHHHhCCC-CEEEEEcCchhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCC
Confidence 678999999999999999 999987653 2222 3468999999999999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHHHHH-hceeeeeec-----cCCCHHHHHHHHHHHhcCc-----chhhccccchhhhccCCCcceE
Q psy2178 226 LICIPMFADQDLNCQRVGK-IKTGIVLEY-----EDLNEEIIFNALKLVLEDP-----QVFKSGWMSLQKWMDGAPEGVI 294 (357)
Q Consensus 226 ~i~~P~~~dQ~~na~~v~~-~G~g~~l~~-----~~~~~~~l~~~i~~~l~~~-----~~~~~a~~l~~~~~~~~~~~vi 294 (357)
+|++|+++||+.||+++++ +|+|+.+.. ..+++++|.++++++|.++ ++|++|++++++.+++..+|
T Consensus 364 ~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~g-- 441 (459)
T PLN02448 364 MLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKG-- 441 (459)
T ss_pred EEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999999999999999998 688888742 2479999999999999764 79999999999999887664
Q ss_pred EEEeecccccCcCchHHHHHHHHHHcc
Q psy2178 295 YFSLGTNMKGTSMGDFRRKAFLKAFAR 321 (357)
Q Consensus 295 ~~slgs~~~g~s~~~~~~~~f~~~~~~ 321 (357)
|||..++. .|++.+++
T Consensus 442 ---------Gss~~~l~--~~v~~~~~ 457 (459)
T PLN02448 442 ---------GSSDTNLD--AFIRDISQ 457 (459)
T ss_pred ---------CcHHHHHH--HHHHHHhc
Confidence 88888886 89988764
No 23
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.7e-35 Score=287.40 Aligned_cols=219 Identities=19% Similarity=0.287 Sum_probs=181.9
Q ss_pred CeeEEEEcCCCccccC-----C-CCCCCeEEeCccccCCC-----------CC-CchHHHHHhccCC-CceEEEecCCcc
Q psy2178 86 KDSFMFSFDSRITGYA-----R-PMQRKLVEVGPLHLVDP-----------KP-LDESLQKWMDGAP-EGVIYFSLGTNM 146 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~-~~~p~v~~vG~l~~~~~-----------~~-l~~~~~~~l~~~~-~~vv~vs~GS~~ 146 (357)
.++.+++||+.+||.. + ...++++.|||+..... .. -+++|.+|||+++ ++||||||||..
T Consensus 215 ~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~ 294 (491)
T PLN02534 215 TAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLC 294 (491)
T ss_pred cCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccc
Confidence 3568999999999953 2 24467999999974210 01 1246999999984 799999999998
Q ss_pred ccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---------c----C-C-CCCcEEEeecCChhhhhcCccceEEEeeC
Q psy2178 147 KGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---------M----E-G-LGENIRLQKWMPQQDILAHPKVKLFIMQG 211 (357)
Q Consensus 147 ~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---------~----~-~-~~~nv~~~~~~pq~~lL~h~~~~~~ithg 211 (357)
. +..+++.+++.+|+.+++ +|||+++.+. + . . .+.++++.+|+||.++|.|+++++|||||
T Consensus 295 ~---~~~~q~~e~a~gl~~~~~-~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~ 370 (491)
T PLN02534 295 R---LVPSQLIELGLGLEASKK-PFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHC 370 (491)
T ss_pred c---CCHHHHHHHHHHHHhCCC-CEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecC
Confidence 5 788999999999999999 9999998420 1 1 1 24677888999999999999999999999
Q ss_pred chhhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeec------------c-CCCHHHHHHHHHHHhc-----Cc
Q psy2178 212 GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEY------------E-DLNEEIIFNALKLVLE-----DP 272 (357)
Q Consensus 212 G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~------------~-~~~~~~l~~~i~~~l~-----~~ 272 (357)
|+||++||+++|||+|++|+++||+.||+++++ +|+|+.+.. . .++++++.++|+++|. +.
T Consensus 371 G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~ 450 (491)
T PLN02534 371 GWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGE 450 (491)
T ss_pred ccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHH
Confidence 999999999999999999999999999999986 799887731 1 2789999999999995 24
Q ss_pred chhhccccchhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHHcc
Q psy2178 273 QVFKSGWMSLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR 321 (357)
Q Consensus 273 ~~~~~a~~l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~ 321 (357)
++|+||++++++.+++..+| |||..+++ .|++.+++
T Consensus 451 ~~R~rA~elk~~a~~Av~~G-----------GSS~~nl~--~fv~~i~~ 486 (491)
T PLN02534 451 RRRRRAQELGVMARKAMELG-----------GSSHINLS--ILIQDVLK 486 (491)
T ss_pred HHHHHHHHHHHHHHHHhcCC-----------CcHHHHHH--HHHHHHHH
Confidence 79999999999998887654 88999886 89998865
No 24
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=5.7e-35 Score=283.07 Aligned_cols=217 Identities=21% Similarity=0.287 Sum_probs=173.5
Q ss_pred CeeEEEEcCCCccccC-----CC-CCCCeEEeCccccCCC----CCCchHHHHHhccC-CCceEEEecCCccccCCCcHH
Q psy2178 86 KDSFMFSFDSRITGYA-----RP-MQRKLVEVGPLHLVDP----KPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDF 154 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-----~~-~~p~v~~vG~l~~~~~----~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~ 154 (357)
+++.+++||+.+||.. +. ..++++.|||+..... ...+++|.+|||.+ +++||||||||... ++.+
T Consensus 192 ~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~---~~~~ 268 (446)
T PLN00414 192 NCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFF---FEKD 268 (446)
T ss_pred cCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeeccccc---CCHH
Confidence 5789999999999954 22 2457999999974321 11235699999997 58999999999986 7889
Q ss_pred HHHHHHHHHHhCCCceEEEEEcCC----c-cCCCC---------CcEEEeecCChhhhhcCccceEEEeeCchhhHHHHH
Q psy2178 155 RRKAFLKAFARLPQYRVLWKWEND----V-MEGLG---------ENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAF 220 (357)
Q Consensus 155 ~~~~i~~al~~~~~~~viw~~~~~----~-~~~~~---------~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal 220 (357)
++.+++.+|+..+. +|+|+++.. . ...+| .+..+.+|+||.+||.|+++++||||||+||++||+
T Consensus 269 q~~e~a~gL~~s~~-~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~ 347 (446)
T PLN00414 269 QFQEFCLGMELTGL-PFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESL 347 (446)
T ss_pred HHHHHHHHHHHcCC-CeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHH
Confidence 99999999999999 999998652 1 01122 234556899999999999999999999999999999
Q ss_pred hcCceEEeecCCCChHHHHHHHH-Hhceeeeeecc---CCCHHHHHHHHHHHhcCc-----chhhccccchhhhccCCCc
Q psy2178 221 HYGVKLICIPMFADQDLNCQRVG-KIKTGIVLEYE---DLNEEIIFNALKLVLEDP-----QVFKSGWMSLQKWMDGAPE 291 (357)
Q Consensus 221 ~~GvP~i~~P~~~dQ~~na~~v~-~~G~g~~l~~~---~~~~~~l~~~i~~~l~~~-----~~~~~a~~l~~~~~~~~~~ 291 (357)
++|||+|++|+++||+.||++++ ++|+|+.+... .++++++.++++++|.++ ++|++|+++++.+.+.
T Consensus 348 ~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~--- 424 (446)
T PLN00414 348 VSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSP--- 424 (446)
T ss_pred HcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcC---
Confidence 99999999999999999999997 58999998643 389999999999999764 3888888888776432
Q ss_pred ceEEEEeecccccCcCchHHHHHHHHHHccCC
Q psy2178 292 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP 323 (357)
Q Consensus 292 ~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp 323 (357)
+|+| .. .+.|++.+++..
T Consensus 425 -----------gg~s-s~--l~~~v~~~~~~~ 442 (446)
T PLN00414 425 -----------GLLS-GY--ADKFVEALENEV 442 (446)
T ss_pred -----------CCcH-HH--HHHHHHHHHHhc
Confidence 2422 22 358988887654
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.95 E-value=5.8e-27 Score=225.24 Aligned_cols=200 Identities=25% Similarity=0.320 Sum_probs=165.3
Q ss_pred CCHHHHhcCCCCeeEEEEcCCCccccC-CCCCCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcH
Q psy2178 75 RSLREIYFDSAKDSFMFSFDSRITGYA-RPMQRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGD 153 (357)
Q Consensus 75 ~~~~~l~~~~~~~~~~l~~s~~~l~~~-~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~ 153 (357)
+.+..+.. ......+...+....+ +..+....++||+........+.+ . ..++++||+|+||... . .
T Consensus 184 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~-~~d~~~vyvslGt~~~---~-~ 251 (406)
T COG1819 184 PNIRRLFA---SGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAANELPYW----I-PADRPIVYVSLGTVGN---A-V 251 (406)
T ss_pred cchHHHhc---CCCCccccccccccCCCCCCCCCcCccccccccccccCcch----h-cCCCCeEEEEcCCccc---H-H
Confidence 33444444 3334444444444444 667778888999886654333322 2 2368899999999986 2 7
Q ss_pred HHHHHHHHHHHhCCCceEEEEEcCCc--cCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecC
Q psy2178 154 FRRKAFLKAFARLPQYRVLWKWENDV--MEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPM 231 (357)
Q Consensus 154 ~~~~~i~~al~~~~~~~viw~~~~~~--~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~ 231 (357)
++++.+.+++++++. +||...++.. ..++|.|+.+.+|+||..+| +++++||||||+||+.||+++|||++++|.
T Consensus 252 ~l~~~~~~a~~~l~~-~vi~~~~~~~~~~~~~p~n~~v~~~~p~~~~l--~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~ 328 (406)
T COG1819 252 ELLAIVLEALADLDV-RVIVSLGGARDTLVNVPDNVIVADYVPQLELL--PRADAVIHHGGAGTTSEALYAGVPLVVIPD 328 (406)
T ss_pred HHHHHHHHHHhcCCc-EEEEeccccccccccCCCceEEecCCCHHHHh--hhcCEEEecCCcchHHHHHHcCCCEEEecC
Confidence 899999999999999 9998887622 45789999999999999999 679999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhccCC
Q psy2178 232 FADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGA 289 (357)
Q Consensus 232 ~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~ 289 (357)
..||+.||.++++.|+|..+..+.++.+.+.++|+++|+++.|+++++++++.++...
T Consensus 329 ~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~~ 386 (406)
T COG1819 329 GADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEFKEED 386 (406)
T ss_pred CcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999998899999999999999999999999999999888753
No 26
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.95 E-value=2.7e-26 Score=221.30 Aligned_cols=215 Identities=22% Similarity=0.323 Sum_probs=172.3
Q ss_pred HHHHHHHHHhcCCcCCCCCHHHHhcCCCCeeEEEEcCCCccccCC-CCCCCeEEeCccccCCCCCCchHHHHHhcc-CCC
Q psy2178 58 DKEQAILNQNLDEKYRKRSLREIYFDSAKDSFMFSFDSRITGYAR-PMQRKLVEVGPLHLVDPKPLDESLQKWMDG-APE 135 (357)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~s~~~l~~~~-~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~-~~~ 135 (357)
...+++++++ |. +.++...+... ..+..+..+.+.|+++. .++++++++||+...... ...|... .++
T Consensus 156 ~~~~~~r~~~-gl--~~~~~~~~~~~--~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~~-----~~~~~~~~~~~ 225 (392)
T TIGR01426 156 ARLSALLEEH-GI--TTPPVEFLAAP--RRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRKE-----DGSWERPGDGR 225 (392)
T ss_pred HHHHHHHHHh-CC--CCCCHHHHhcC--CcCcEEEeCChHhCCCccccCCCeEEECCCCCCccc-----cCCCCCCCCCC
Confidence 5567776664 43 23344444331 34556777888888764 578999999998754321 1125544 358
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc----cCCCCCcEEEeecCChhhhhcCccceEEEeeC
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV----MEGLGENIRLQKWMPQQDILAHPKVKLFIMQG 211 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~----~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithg 211 (357)
++|||++||... ...+.++.+++++.+.+. +++|..+... ....++|+.+.+|+||.++|. +++++||||
T Consensus 226 ~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~-~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~~ll~--~~~~~I~hg 299 (392)
T TIGR01426 226 PVVLISLGTVFN---NQPSFYRTCVEAFRDLDW-HVVLSVGRGVDPADLGELPPNVEVRQWVPQLEILK--KADAFITHG 299 (392)
T ss_pred CEEEEecCccCC---CCHHHHHHHHHHHhcCCC-eEEEEECCCCChhHhccCCCCeEEeCCCCHHHHHh--hCCEEEECC
Confidence 899999999864 234588899999999998 9998876532 334678999999999999995 599999999
Q ss_pred chhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhccC
Q psy2178 212 GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDG 288 (357)
Q Consensus 212 G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~ 288 (357)
|.||+.||+++|+|+|++|...||..||+++++.|+|..+...+++.+++.++|+++++|++|+++++++++.+++.
T Consensus 300 G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~ 376 (392)
T TIGR01426 300 GMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREA 376 (392)
T ss_pred CchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999998778999999999999999999999999999888754
No 27
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.94 E-value=1.2e-25 Score=217.17 Aligned_cols=186 Identities=21% Similarity=0.273 Sum_probs=150.8
Q ss_pred CCCcc-ccCCCCCCCeEEeCccccCC--CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCce
Q psy2178 94 DSRIT-GYARPMQRKLVEVGPLHLVD--PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYR 170 (357)
Q Consensus 94 s~~~l-~~~~~~~p~v~~vG~l~~~~--~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~ 170 (357)
..+.+ +.+.+++++..++|+..... ....++++..|++. ++++|||+|||... ..+....+.++++++..+. +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~Gs~~~--~~~~~~~~~~~~a~~~~~~-~ 271 (401)
T cd03784 196 FSPAVLPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLAA-GRPPVYVGFGSMVV--RDPEALARLDVEAVATLGQ-R 271 (401)
T ss_pred cCcccCCCCCCccccCcEeCCCCCCCCCCCCCCHHHHHHHhC-CCCcEEEeCCCCcc--cCHHHHHHHHHHHHHHcCC-e
Confidence 33443 34456888888886433322 33456788899876 46789999999875 2356788899999999887 9
Q ss_pred EEEEEcCCcc--CCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhcee
Q psy2178 171 VLWKWENDVM--EGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTG 248 (357)
Q Consensus 171 viw~~~~~~~--~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g 248 (357)
++|..+.... ...++|+++.+|+||.++| +++++||||||+||+.||+++|||+|++|...||+.||+++++.|+|
T Consensus 272 ~i~~~g~~~~~~~~~~~~v~~~~~~p~~~ll--~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g 349 (401)
T cd03784 272 AILSLGWGGLGAEDLPDNVRVVDFVPHDWLL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAG 349 (401)
T ss_pred EEEEccCccccccCCCCceEEeCCCCHHHHh--hhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCC
Confidence 9999876432 2457899999999999999 45999999999999999999999999999999999999999999999
Q ss_pred eeeeccCCCHHHHHHHHHHHhcCcchhhccccchhhhc
Q psy2178 249 IVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWM 286 (357)
Q Consensus 249 ~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~ 286 (357)
+.++..+++.+++.++++++++++ ++++++++++.++
T Consensus 350 ~~l~~~~~~~~~l~~al~~~l~~~-~~~~~~~~~~~~~ 386 (401)
T cd03784 350 PALDPRELTAERLAAALRRLLDPP-SRRRAAALLRRIR 386 (401)
T ss_pred CCCCcccCCHHHHHHHHHHHhCHH-HHHHHHHHHHHHH
Confidence 999877789999999999999865 5555666666554
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.60 E-value=1.6e-14 Score=137.05 Aligned_cols=169 Identities=17% Similarity=0.154 Sum_probs=119.1
Q ss_pred CCeEEeCccccCC-CCCCchHHHHHhcc-CCCceEEEecCCccccCCCcHHHHHHHHHHHHhC-CCceEEEEEcCCccCC
Q psy2178 106 RKLVEVGPLHLVD-PKPLDESLQKWMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL-PQYRVLWKWENDVMEG 182 (357)
Q Consensus 106 p~v~~vG~l~~~~-~~~l~~~~~~~l~~-~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~-~~~~viw~~~~~~~~~ 182 (357)
.+++++|+-..+. .....++..+.+.- .++++|+|..||... ...-+.+.+++..+ ..++++|.++.+..+.
T Consensus 154 ~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga-----~~in~~~~~~l~~l~~~~~vv~~~G~~~~~~ 228 (352)
T PRK12446 154 EKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGA-----KKINETVREALPELLLKYQIVHLCGKGNLDD 228 (352)
T ss_pred CCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccch-----HHHHHHHHHHHHhhccCcEEEEEeCCchHHH
Confidence 4688899766433 11112222222332 247899999999875 22223333333332 1249999998764322
Q ss_pred ---CCCcEEEeecC-Chh-hhhcCccceEEEeeCchhhHHHHHhcCceEEeecCC-----CChHHHHHHHHHhceeeeee
Q psy2178 183 ---LGENIRLQKWM-PQQ-DILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMF-----ADQDLNCQRVGKIKTGIVLE 252 (357)
Q Consensus 183 ---~~~nv~~~~~~-pq~-~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~-----~dQ~~na~~v~~~G~g~~l~ 252 (357)
...++.+.+|+ ++. +++ ..++++|||||.+|+.|++++|+|+|++|+. .||..||+++++.|+|..+.
T Consensus 229 ~~~~~~~~~~~~f~~~~m~~~~--~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 229 SLQNKEGYRQFEYVHGELPDIL--AITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred HHhhcCCcEEecchhhhHHHHH--HhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 11355667777 443 567 4599999999999999999999999999974 48999999999999999998
Q ss_pred ccCCCHHHHHHHHHHHhcCc-chhhccccc
Q psy2178 253 YEDLNEEIIFNALKLVLEDP-QVFKSGWMS 281 (357)
Q Consensus 253 ~~~~~~~~l~~~i~~~l~~~-~~~~~a~~l 281 (357)
.++++.+.+.+++.++++|+ .++++++++
T Consensus 307 ~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~ 336 (352)
T PRK12446 307 EEDVTVNSLIKHVEELSHNNEKYKTALKKY 336 (352)
T ss_pred hhcCCHHHHHHHHHHHHcCHHHHHHHHHHc
Confidence 78899999999999999875 565555443
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.56 E-value=5.1e-14 Score=131.80 Aligned_cols=123 Identities=24% Similarity=0.401 Sum_probs=102.7
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecC--ChhhhhcCccceEEEeeC
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWM--PQQDILAHPKVKLFIMQG 211 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~--pq~~lL~h~~~~~~ithg 211 (357)
+++.|+|+||+... . .+.+++++.+.+++++. +........+|+.+.++. ...++| .+++++||||
T Consensus 191 ~~~~iLv~~gg~~~-----~----~~~~~l~~~~~~~~~v~-g~~~~~~~~~ni~~~~~~~~~~~~~m--~~ad~vIs~~ 258 (318)
T PF13528_consen 191 DEPKILVYFGGGGP-----G----DLIEALKALPDYQFIVF-GPNAADPRPGNIHVRPFSTPDFAELM--AAADLVISKG 258 (318)
T ss_pred CCCEEEEEeCCCcH-----H----HHHHHHHhCCCCeEEEE-cCCcccccCCCEEEeecChHHHHHHH--HhCCEEEECC
Confidence 46789999999864 2 66778888886476665 544433448899999986 345677 5699999999
Q ss_pred chhhHHHHHhcCceEEeecC--CCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHH
Q psy2178 212 GLQSLQEAFHYGVKLICIPM--FADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLV 268 (357)
Q Consensus 212 G~~s~~eal~~GvP~i~~P~--~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~ 268 (357)
|.+|+.|+++.|+|++++|. +.||..||+++++.|+|..++..+++++.|.+.|+++
T Consensus 259 G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 259 GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 99999999999999999998 7899999999999999999988899999999998764
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.54 E-value=5.1e-14 Score=132.23 Aligned_cols=127 Identities=21% Similarity=0.405 Sum_probs=97.0
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-cCCCCCcEEEeecCC--hhhhhcCccceEEEee
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-MEGLGENIRLQKWMP--QQDILAHPKVKLFIMQ 210 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-~~~~~~nv~~~~~~p--q~~lL~h~~~~~~ith 210 (357)
+++.|+|.+|+... +.+++++++.+++.+++. +.+. ....++|+.+.+|.| ..+.| +.++++|||
T Consensus 187 ~~~~iLv~~g~~~~---------~~l~~~l~~~~~~~~i~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l--~~ad~vI~~ 254 (321)
T TIGR00661 187 GEDYILVYIGFEYR---------YKILELLGKIANVKFVCY-SYEVAKNSYNENVEIRRITTDNFKELI--KNAELVITH 254 (321)
T ss_pred CCCcEEEECCcCCH---------HHHHHHHHhCCCeEEEEe-CCCCCccccCCCEEEEECChHHHHHHH--HhCCEEEEC
Confidence 35678888888542 345677877776455532 2221 234578999999998 23455 679999999
Q ss_pred CchhhHHHHHhcCceEEeecCCC--ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 211 GGLQSLQEAFHYGVKLICIPMFA--DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 211 gG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
||.+|+.|++++|+|++++|..+ ||..||+.+++.|+|+.++..++ ++.+++.++++|+.|+
T Consensus 255 ~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 255 GGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred CChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH---HHHHHHHhcccccccc
Confidence 99999999999999999999855 89999999999999999876655 6666777777777664
No 31
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.54 E-value=1.6e-15 Score=128.87 Aligned_cols=132 Identities=21% Similarity=0.353 Sum_probs=95.6
Q ss_pred eEEEecCCccccCCCcHHHHHH---HHHHHHhC-CCceEEEEEcCCcc-------CCCCCcEEEeecCCh-hhhhcCccc
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKA---FLKAFARL-PQYRVLWKWENDVM-------EGLGENIRLQKWMPQ-QDILAHPKV 204 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~---i~~al~~~-~~~~viw~~~~~~~-------~~~~~nv~~~~~~pq-~~lL~h~~~ 204 (357)
+|+|+.||... ..+.+. +.+.+... +.+++++.+|.... .....++.+.+|.++ .+++ ..+
T Consensus 1 tilv~gGs~g~-----~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m--~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGA-----RDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELM--AAA 73 (167)
T ss_dssp -EEEEETTTSH-----HHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHH--HHH
T ss_pred CEEEEECCCCH-----HHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHH--HHc
Confidence 48999998764 222222 23332221 11378888887532 122368999999995 5666 569
Q ss_pred eEEEeeCchhhHHHHHhcCceEEeecCCC----ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 205 KLFIMQGGLQSLQEAFHYGVKLICIPMFA----DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 205 ~~~ithgG~~s~~eal~~GvP~i~~P~~~----dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
+++|||||.+|+.|+++.|+|+|++|... +|..||..+++.|+|..+.....+.+.|.++|.+++.++..+
T Consensus 74 DlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~~ 148 (167)
T PF04101_consen 74 DLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEKL 148 (167)
T ss_dssp SEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-S
T ss_pred CEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHHH
Confidence 99999999999999999999999999988 999999999999999999877777889999999999887543
No 32
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.47 E-value=1.1e-12 Score=123.83 Aligned_cols=157 Identities=19% Similarity=0.279 Sum_probs=116.3
Q ss_pred CeEEeCccccCC-CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCC-CceEEEEEcCCccC---
Q psy2178 107 KLVEVGPLHLVD-PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP-QYRVLWKWENDVME--- 181 (357)
Q Consensus 107 ~v~~vG~l~~~~-~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~-~~~viw~~~~~~~~--- 181 (357)
+++.+|--...+ .. ++..-..+....++++|+|.-||... ..+-+.+.+++..+. .+.+++.++.+...
T Consensus 155 ~~~~tG~Pvr~~~~~-~~~~~~~~~~~~~~~~ilV~GGS~Ga-----~~ln~~v~~~~~~l~~~~~v~~~~G~~~~~~~~ 228 (357)
T COG0707 155 NVVVTGIPVRPEFEE-LPAAEVRKDGRLDKKTILVTGGSQGA-----KALNDLVPEALAKLANRIQVIHQTGKNDLEELK 228 (357)
T ss_pred ceEEecCcccHHhhc-cchhhhhhhccCCCcEEEEECCcchh-----HHHHHHHHHHHHHhhhCeEEEEEcCcchHHHHH
Confidence 577777544332 22 23332222222257899999999975 334444444444444 35888888876422
Q ss_pred ----CCCCcEEEeecCChhh-hhcCccceEEEeeCchhhHHHHHhcCceEEeecC-C---CChHHHHHHHHHhceeeeee
Q psy2178 182 ----GLGENIRLQKWMPQQD-ILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPM-F---ADQDLNCQRVGKIKTGIVLE 252 (357)
Q Consensus 182 ----~~~~nv~~~~~~pq~~-lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~-~---~dQ~~na~~v~~~G~g~~l~ 252 (357)
.... +.+.+|..++. ++ ..+|++||++|.+|+.|+++.|+|+|.+|. . .||..||+.+++.|.|..++
T Consensus 229 ~~~~~~~~-~~v~~f~~dm~~~~--~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~ 305 (357)
T COG0707 229 SAYNELGV-VRVLPFIDDMAALL--AAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIR 305 (357)
T ss_pred HHHhhcCc-EEEeeHHhhHHHHH--HhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEec
Confidence 1122 88899998865 55 569999999999999999999999999986 3 38999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHhcCc
Q psy2178 253 YEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 253 ~~~~~~~~l~~~i~~~l~~~ 272 (357)
..+++.+++.+.|.+++.++
T Consensus 306 ~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 306 QSELTPEKLAELILRLLSNP 325 (357)
T ss_pred cccCCHHHHHHHHHHHhcCH
Confidence 88999999999999999874
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.30 E-value=5.8e-11 Score=113.00 Aligned_cols=189 Identities=16% Similarity=0.169 Sum_probs=122.5
Q ss_pred CeeEEEEcCCCccccCCCCCCCeEEeCccccCCCCCCchHHHHHhccC-CCceEEEecCCccccCCCcHHHHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKLVEVGPLHLVDPKPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFA 164 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~ 164 (357)
.+|.+++.+...+.. .-..+++++|..........+..-.+ +... +.++|++..|+... ......+.+++.
T Consensus 136 ~~d~ii~~~~~~~~~--~~~~~i~vi~n~v~~~~~~~~~~~~~-~~~~~~~~~i~~~gg~~~~-----~~~~~~l~~a~~ 207 (357)
T PRK00726 136 FAKKVATAFPGAFPE--FFKPKAVVTGNPVREEILALAAPPAR-LAGREGKPTLLVVGGSQGA-----RVLNEAVPEALA 207 (357)
T ss_pred HhchheECchhhhhc--cCCCCEEEECCCCChHhhcccchhhh-ccCCCCCeEEEEECCcHhH-----HHHHHHHHHHHH
Confidence 456666555433321 22357888886653221111111111 1222 34566665555432 222333346665
Q ss_pred hCCCc-eEEEEEcCCccC------CCCCcEEEeecCCh-hhhhcCccceEEEeeCchhhHHHHHhcCceEEeecC----C
Q psy2178 165 RLPQY-RVLWKWENDVME------GLGENIRLQKWMPQ-QDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPM----F 232 (357)
Q Consensus 165 ~~~~~-~viw~~~~~~~~------~~~~nv~~~~~~pq-~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~----~ 232 (357)
++... .+++.++....+ ...-++.+.+|+.+ .+++ +.++++|+|+|.++++||+++|+|+|++|. .
T Consensus 208 ~~~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 208 LLPEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAY--AAADLVICRAGASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred HhhhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHH--HhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCc
Confidence 55431 455666653211 12224788899844 5677 569999999999999999999999999996 4
Q ss_pred CChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchhh
Q psy2178 233 ADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQK 284 (357)
Q Consensus 233 ~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~ 284 (357)
++|..|+..+.+.|.|..+..++++.+.+.++|.++++|+++++.+.+-++.
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~ 337 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARA 337 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHh
Confidence 6899999999999999999877888999999999999998877665554443
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.19 E-value=3.6e-10 Score=107.03 Aligned_cols=185 Identities=19% Similarity=0.182 Sum_probs=118.4
Q ss_pred CeeEEEEcCCCccccCCCCCCCeEEeCccccCCCCCCchHHHHHhccC-CCceEEEecCCccccCCCcHHHHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKLVEVGPLHLVDPKPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFA 164 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~ 164 (357)
.++.+++.+....+. -...++.++|...........+. .+.+... ++.+|++..|+... ....+.+.++++
T Consensus 134 ~~~~vi~~s~~~~~~--~~~~~~~~i~n~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~g~~~~-----~~~~~~l~~a~~ 205 (350)
T cd03785 134 FADRVALSFPETAKY--FPKDKAVVTGNPVREEILALDRE-RARLGLRPGKPTLLVFGGSQGA-----RAINEAVPEALA 205 (350)
T ss_pred hhCEEEEcchhhhhc--CCCCcEEEECCCCchHHhhhhhh-HHhcCCCCCCeEEEEECCcHhH-----HHHHHHHHHHHH
Confidence 356777666655443 11346777876542211011111 2222222 35556666666532 222222334433
Q ss_pred hC--CCceEEEEEcCCcc-------CCCCCcEEEeecCC-hhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecC---
Q psy2178 165 RL--PQYRVLWKWENDVM-------EGLGENIRLQKWMP-QQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPM--- 231 (357)
Q Consensus 165 ~~--~~~~viw~~~~~~~-------~~~~~nv~~~~~~p-q~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~--- 231 (357)
.+ ..+.+++.++.... ....+|+.+.+|.. ..++| ..++++|+++|.+++.||+++|+|+++.|.
T Consensus 206 ~l~~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l--~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~ 283 (350)
T cd03785 206 ELLRKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAY--AAADLVISRAGASTVAELAALGLPAILIPLPYA 283 (350)
T ss_pred HhhccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHH--HhcCEEEECCCHhHHHHHHHhCCCEEEeecCCC
Confidence 33 22256666665421 12246899999983 34667 569999999999999999999999999985
Q ss_pred -CCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcccc
Q psy2178 232 -FADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWM 280 (357)
Q Consensus 232 -~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 280 (357)
..+|..|+..+.+.|.|..++..+.+.+++.+++++++++++.++.+.+
T Consensus 284 ~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 333 (350)
T cd03785 284 ADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAE 333 (350)
T ss_pred CCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 4678999999999999999876556899999999999988766554433
No 35
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.14 E-value=3.5e-11 Score=119.79 Aligned_cols=67 Identities=40% Similarity=0.792 Sum_probs=56.0
Q ss_pred cC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCcCCCCCCCeEeecCCChhhhhC
Q psy2178 287 DG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILG 356 (357)
Q Consensus 287 ~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~~~~~~~n~~~~~w~pQ~~~l~ 356 (357)
+. +++|+||+||||.+. +++....+.|+++|+++|+ +||||+++..+..+|+|+++++|+||+|||+
T Consensus 271 ~~~~~~~vv~vsfGs~~~--~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~~~l~~n~~~~~W~PQ~~lL~ 338 (500)
T PF00201_consen 271 DSSGKKGVVYVSFGSIVS--SMPEEKLKEIAEAFENLPQ-RFIWKYEGEPPENLPKNVLIVKWLPQNDLLA 338 (500)
T ss_dssp STTTTTEEEEEE-TSSST--T-HHHHHHHHHHHHHCSTT-EEEEEETCSHGCHHHTTEEEESS--HHHHHT
T ss_pred hccCCCCEEEEecCcccc--hhHHHHHHHHHHHHhhCCC-cccccccccccccccceEEEeccccchhhhh
Confidence 44 678999999999874 5777767899999999996 9999999987788899999999999999996
No 36
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.03 E-value=5.6e-09 Score=95.37 Aligned_cols=179 Identities=19% Similarity=0.176 Sum_probs=132.3
Q ss_pred CeeEEEEcCCCccccC-------CCCCCCeEEeCccccCCC-CCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHH
Q psy2178 86 KDSFMFSFDSRITGYA-------RPMQRKLVEVGPLHLVDP-KPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRK 157 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~-------~~~~p~v~~vG~l~~~~~-~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~ 157 (357)
..|.+++..+|.+-.+ ..+..+++|+|.+...-+ .++|.. ...++-.|+||-|.-. ...+++.
T Consensus 167 ~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~-----~~pE~~~Ilvs~GGG~----dG~eLi~ 237 (400)
T COG4671 167 FYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPH-----EAPEGFDILVSVGGGA----DGAELIE 237 (400)
T ss_pred hheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCc-----CCCccceEEEecCCCh----hhHHHHH
Confidence 5688999998876432 336678999998822111 122211 1133446899988876 4688888
Q ss_pred HHHHHHHhCCCce--EEEEEcCCccC----------CCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCce
Q psy2178 158 AFLKAFARLPQYR--VLWKWENDVME----------GLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVK 225 (357)
Q Consensus 158 ~i~~al~~~~~~~--viw~~~~~~~~----------~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP 225 (357)
..++|-...+..+ .+..+++.... ...+++.+..|-.+..-|- ..++++|+-||.||+.|-+++|+|
T Consensus 238 ~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll-~gA~~vVSm~GYNTvCeILs~~k~ 316 (400)
T COG4671 238 TALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLL-AGARLVVSMGGYNTVCEILSFGKP 316 (400)
T ss_pred HHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHH-HhhheeeecccchhhhHHHhCCCc
Confidence 8888876655434 44455653311 1237899999988765444 369999999999999999999999
Q ss_pred EEeecCC---CChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcch
Q psy2178 226 LICIPMF---ADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQV 274 (357)
Q Consensus 226 ~i~~P~~---~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 274 (357)
.+++|.. .||..-|+|+++.|+.-++..+++++..+.+++...++.|+.
T Consensus 317 aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~ 368 (400)
T COG4671 317 ALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSP 368 (400)
T ss_pred eEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCCC
Confidence 9999974 389999999999999999988999999999999998865443
No 37
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.02 E-value=5.7e-10 Score=110.70 Aligned_cols=69 Identities=35% Similarity=0.771 Sum_probs=60.5
Q ss_pred cCCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCcCC-CCCCCeEeecCCChhhhhC
Q psy2178 287 DGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME-GLGENIRLQKWMPQQDILG 356 (357)
Q Consensus 287 ~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~~~-~~~~n~~~~~w~pQ~~~l~ 356 (357)
+++++++||+|+||.+..++++....+.++++|+++| ++||||++++..+ ++|+||++.+|+||+|||+
T Consensus 292 ~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~ 361 (507)
T PHA03392 292 NNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-YNVLWKYDGEVEAINLPANVLTQKWFPQRAVLK 361 (507)
T ss_pred hcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-CeEEEEECCCcCcccCCCceEEecCCCHHHHhc
Confidence 4556689999999988777788888899999999999 5999999986554 7899999999999999995
No 38
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.99 E-value=7.1e-09 Score=99.57 Aligned_cols=135 Identities=15% Similarity=0.223 Sum_probs=100.6
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-----c----CCCCCcEEEeecCChh-hhhcCcc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-----M----EGLGENIRLQKWMPQQ-DILAHPK 203 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-----~----~~~~~nv~~~~~~pq~-~lL~h~~ 203 (357)
++++|++..|+... .+-+..+++++.+.+.+++++..+++. + ...++|+++.+|+++. ++++ .
T Consensus 201 ~~~~il~~~G~~~~-----~k~~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~--~ 273 (380)
T PRK13609 201 NKKILLIMAGAHGV-----LGNVKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFR--V 273 (380)
T ss_pred CCcEEEEEcCCCCC-----CcCHHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHH--h
Confidence 35677777777653 122456677776655557777766432 1 1234689999999875 6774 5
Q ss_pred ceEEEeeCchhhHHHHHhcCceEEee-cCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccc
Q psy2178 204 VKLFIMQGGLQSLQEAFHYGVKLICI-PMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGW 279 (357)
Q Consensus 204 ~~~~ithgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 279 (357)
++++|+.+|..++.||+++|+|+|+. |..+.+..|+..+++.|+|+... +.+++.++|.++++|++.++.+.
T Consensus 274 aD~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~~~~~m~ 346 (380)
T PRK13609 274 TSCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDMKLLQMK 346 (380)
T ss_pred ccEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHHHHHHHH
Confidence 89999999988999999999999986 77777889999999899887643 57899999999999876654433
No 39
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.96 E-value=1e-08 Score=99.04 Aligned_cols=132 Identities=12% Similarity=0.148 Sum_probs=98.4
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHH-HhCCCceEEEEEcCCc-----cC---CCCCcEEEeecCChh-hhhcCcc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAF-ARLPQYRVLWKWENDV-----ME---GLGENIRLQKWMPQQ-DILAHPK 203 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al-~~~~~~~viw~~~~~~-----~~---~~~~nv~~~~~~pq~-~lL~h~~ 203 (357)
++++|+++.|+... ...+..+++++ +..+.+++++..+++. +. ...+++.+.+|.++. +++ ..
T Consensus 201 ~~~~ilv~~G~lg~-----~k~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~--~~ 273 (391)
T PRK13608 201 DKQTILMSAGAFGV-----SKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWM--AS 273 (391)
T ss_pred CCCEEEEECCCccc-----chhHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHH--Hh
Confidence 36678888888763 23344455553 3334447777666542 11 224588999999765 466 46
Q ss_pred ceEEEeeCchhhHHHHHhcCceEEee-cCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhh
Q psy2178 204 VKLFIMQGGLQSLQEAFHYGVKLICI-PMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFK 276 (357)
Q Consensus 204 ~~~~ithgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~ 276 (357)
+|++|+.+|..|+.||+++|+|+|+. |..++|..|+..+.+.|+|+... +.+++.++|.++++|++.++
T Consensus 274 aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~~~~~ 343 (391)
T PRK13608 274 SQLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNEQLT 343 (391)
T ss_pred hhEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCHHHHH
Confidence 99999998888999999999999999 77777889999999999998764 68889999999998875443
No 40
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.83 E-value=2.6e-08 Score=94.17 Aligned_cols=86 Identities=24% Similarity=0.304 Sum_probs=71.7
Q ss_pred ChhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecCC---CChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 194 PQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMF---ADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 194 pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~---~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
+-.+++ +.++++|+++|.++++||+++|+|+|+.|.. .+|..|+..+++.+.|..+...+.+.+++.++++++++
T Consensus 243 ~~~~~l--~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~ 320 (348)
T TIGR01133 243 NMAAAY--AAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL 320 (348)
T ss_pred CHHHHH--HhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc
Confidence 345677 5699999999988999999999999999863 47888999999999999887777789999999999999
Q ss_pred Ccchhhccccc
Q psy2178 271 DPQVFKSGWMS 281 (357)
Q Consensus 271 ~~~~~~~a~~l 281 (357)
|++.++++.+-
T Consensus 321 ~~~~~~~~~~~ 331 (348)
T TIGR01133 321 DPANLEAMAEA 331 (348)
T ss_pred CHHHHHHHHHH
Confidence 98766544433
No 41
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.71 E-value=2.3e-07 Score=89.28 Aligned_cols=136 Identities=13% Similarity=0.091 Sum_probs=92.2
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHH----hCCCceEEEEEcCCc-----cCC--CCCcEEEeecCChh-hhhcC
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFA----RLPQYRVLWKWENDV-----MEG--LGENIRLQKWMPQQ-DILAH 201 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~----~~~~~~viw~~~~~~-----~~~--~~~nv~~~~~~pq~-~lL~h 201 (357)
++++|++..|+... . .-...++.+.+.+. ..+.+++++.+|.+. +.. ...++++.+|+++. +++
T Consensus 205 ~~~~il~~Gg~~g~-~-~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~-- 280 (382)
T PLN02605 205 DLPAVLLMGGGEGM-G-PLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWM-- 280 (382)
T ss_pred CCcEEEEECCCccc-c-cHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHH--
Confidence 35667766665542 1 11233333333221 023336677777542 111 23578899999875 455
Q ss_pred ccceEEEeeCchhhHHHHHhcCceEEeecCCCCh-HHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC-cchhhc
Q psy2178 202 PKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQ-DLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED-PQVFKS 277 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ-~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~-~~~~~~ 277 (357)
..+|++|+.+|.+|+.||+++|+|+|+.+....| ..|+..+.+.|.|... -+.+++.++|.+++.+ ++.+++
T Consensus 281 ~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~----~~~~~la~~i~~ll~~~~~~~~~ 354 (382)
T PLN02605 281 GACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS----ESPKEIARIVAEWFGDKSDELEA 354 (382)
T ss_pred HhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec----CCHHHHHHHHHHHHcCCHHHHHH
Confidence 5699999999999999999999999999765555 4799999999998765 2689999999999987 554433
No 42
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.71 E-value=6.1e-08 Score=89.17 Aligned_cols=98 Identities=18% Similarity=0.123 Sum_probs=75.4
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCC-CceEEEEEcCCcc--------CCCCCcEEEeecCChh-hhhcCccce
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP-QYRVLWKWENDVM--------EGLGENIRLQKWMPQQ-DILAHPKVK 205 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~-~~~viw~~~~~~~--------~~~~~nv~~~~~~pq~-~lL~h~~~~ 205 (357)
+.|+|+||..-. ......+++++.+.. .+++.+.++.... ....+|+.+..++++. +++ ..++
T Consensus 171 ~~iLi~~GG~d~-----~~~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm--~~aD 243 (279)
T TIGR03590 171 RRVLVSFGGADP-----DNLTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELM--NEAD 243 (279)
T ss_pred CeEEEEeCCcCC-----cCHHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHH--HHCC
Confidence 569999997653 334556667776542 2367777776321 1224689999999986 667 5699
Q ss_pred EEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHH
Q psy2178 206 LFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQR 241 (357)
Q Consensus 206 ~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~ 241 (357)
++||+|| +|+.|+++.|+|+|++|...+|..||+.
T Consensus 244 l~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 244 LAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999999 9999999999999999999999999975
No 43
>KOG1192|consensus
Probab=98.62 E-value=5.9e-08 Score=96.54 Aligned_cols=66 Identities=35% Similarity=0.664 Sum_probs=57.4
Q ss_pred CcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCc----CCCC----CCCeEeecCCChhhhh
Q psy2178 290 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV----MEGL----GENIRLQKWMPQQDIL 355 (357)
Q Consensus 290 ~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~----~~~~----~~n~~~~~w~pQ~~~l 355 (357)
.++++|+|+||.+.++.++....+.++.+|+++|.+.|+||++.+. +++. +.||..++|+||.|+|
T Consensus 276 ~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll 349 (496)
T KOG1192|consen 276 RHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL 349 (496)
T ss_pred cCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh
Confidence 5699999999999988999999999999999997788999999852 2333 4599999999999986
No 44
>KOG3349|consensus
Probab=98.56 E-value=3e-07 Score=74.01 Aligned_cols=112 Identities=14% Similarity=0.143 Sum_probs=81.2
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc--CC------CCCc--EEEeecCCh-hhhhcCccc
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM--EG------LGEN--IRLQKWMPQ-QDILAHPKV 204 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~--~~------~~~n--v~~~~~~pq-~~lL~h~~~ 204 (357)
..+||+-||....+..+.-..+++.+.|.+.+..+.+..++.... +. ..+. +...+|-|. .+.. ..+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I--~~A 81 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI--RSA 81 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHH--hhc
Confidence 369999999986433334445567888888888788888887531 10 1222 233456675 3334 349
Q ss_pred eEEEeeCchhhHHHHHhcCceEEeec----CCCChHHHHHHHHHhceee
Q psy2178 205 KLFIMQGGLQSLQEAFHYGVKLICIP----MFADQDLNCQRVGKIKTGI 249 (357)
Q Consensus 205 ~~~ithgG~~s~~eal~~GvP~i~~P----~~~dQ~~na~~v~~~G~g~ 249 (357)
+++|+|+|.||++|.+..|+|.|+++ +-.+|..-|..+++.|.=.
T Consensus 82 dlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~ 130 (170)
T KOG3349|consen 82 DLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLY 130 (170)
T ss_pred cEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEE
Confidence 99999999999999999999999998 3568888899998887533
No 45
>PLN03004 UDP-glycosyltransferase
Probab=98.40 E-value=5.7e-07 Score=87.87 Aligned_cols=66 Identities=18% Similarity=0.389 Sum_probs=54.6
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC--------cCCC-CC---------CCeEeecCC
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND--------VMEG-LG---------ENIRLQKWM 349 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~--------~~~~-~~---------~n~~~~~w~ 349 (357)
+.+++|+|+||||. ..++....+++..+|...++ +|||+++.+ ...+ +| +|+.+.+|+
T Consensus 267 ~~~~sVvyvsfGS~---~~~~~~q~~ela~gL~~s~~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~ 342 (451)
T PLN03004 267 QPEKSVVFLCFGSL---GLFSKEQVIEIAVGLEKSGQ-RFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWA 342 (451)
T ss_pred CCCCceEEEEeccc---ccCCHHHHHHHHHHHHHCCC-CEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeC
Confidence 34679999999997 56778888899999999995 999999953 1222 55 899999999
Q ss_pred ChhhhhCC
Q psy2178 350 PQQDILGT 357 (357)
Q Consensus 350 pQ~~~l~~ 357 (357)
||.++|+.
T Consensus 343 PQ~~iL~H 350 (451)
T PLN03004 343 PQVPVLNH 350 (451)
T ss_pred CHHHHhCC
Confidence 99999973
No 46
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.37 E-value=1e-06 Score=84.89 Aligned_cols=193 Identities=16% Similarity=0.067 Sum_probs=115.4
Q ss_pred eeEEEEcCCCccccCCCCCCCeEEeCccccCC-CC--CCchHHHHHhccC-CCceEEEecCCccccCCCcHHHHHHHHHH
Q psy2178 87 DSFMFSFDSRITGYARPMQRKLVEVGPLHLVD-PK--PLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKA 162 (357)
Q Consensus 87 ~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~-~~--~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~a 162 (357)
+|.+++.+..+.+.-....-++.+||.-..+. .. +...+..+-+.-. ++++|.+..||.... .......++++
T Consensus 139 ~d~v~~~~~~e~~~~~~~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~ae---i~k~~~~ll~a 215 (385)
T TIGR00215 139 TDFLLAILPFEKAFYQKKNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSE---VEKLFPLFLKA 215 (385)
T ss_pred HhHhhccCCCcHHHHHhcCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHH---HHHhHHHHHHH
Confidence 44455444443332222234677898544322 11 1222233323322 467788888887641 12344555544
Q ss_pred HHhC----CCceEEEEEcCCc----cC----C--CCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEe
Q psy2178 163 FARL----PQYRVLWKWENDV----ME----G--LGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLIC 228 (357)
Q Consensus 163 l~~~----~~~~viw~~~~~~----~~----~--~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~ 228 (357)
+..+ +.+++++...... .. . ....+....+ ...+++ ..+|++|+..|..|+ |++++|+|+|+
T Consensus 216 ~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l--~aADl~V~~SGt~tl-Ea~a~G~P~Vv 291 (385)
T TIGR00215 216 AQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG-DARKAM--FAADAALLASGTAAL-EAALIKTPMVV 291 (385)
T ss_pred HHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc-hHHHHH--HhCCEEeecCCHHHH-HHHHcCCCEEE
Confidence 4432 3335554432211 11 1 1223333322 234566 469999999999887 99999999999
Q ss_pred e----cCCC---------ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc----chhhccccchhhhc
Q psy2178 229 I----PMFA---------DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP----QVFKSGWMSLQKWM 286 (357)
Q Consensus 229 ~----P~~~---------dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~----~~~~~a~~l~~~~~ 286 (357)
+ |+.. .|..|+..+.+.++...+..++++++.|.+.+.++++|+ ++++..++--+.++
T Consensus 292 ~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 366 (385)
T TIGR00215 292 GYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELR 366 (385)
T ss_pred EEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 9 7531 377799999999999888778899999999999999998 66655544333333
No 47
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.32 E-value=4.6e-06 Score=80.58 Aligned_cols=181 Identities=17% Similarity=0.118 Sum_probs=112.3
Q ss_pred CeeEEEEcCCCccccCCCCCCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHh
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR 165 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~ 165 (357)
.++.+++.....-+.-+...-++++||--..+.-...... . ++ .+.++|.+--||-... ....+..+++++..
T Consensus 160 ~a~~v~~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~~--~-l~-~~~~~lllLpGSR~ae---~~~~lp~~l~al~~ 232 (396)
T TIGR03492 160 RCLAVFVRDRLTARDLRRQGVRASYLGNPMMDGLEPPERK--P-LL-TGRFRIALLPGSRPPE---AYRNLKLLLRALEA 232 (396)
T ss_pred hhCEEeCCCHHHHHHHHHCCCeEEEeCcCHHhcCcccccc--c-cC-CCCCEEEEECCCCHHH---HHccHHHHHHHHHH
Confidence 4566666554433332333347999996655431111111 1 21 2356788888888541 12234456666655
Q ss_pred C---CCceEEEEEc-CCcc-------C--CCC--------------CcEEEeecCCh-hhhhcCccceEEEeeCchhhHH
Q psy2178 166 L---PQYRVLWKWE-NDVM-------E--GLG--------------ENIRLQKWMPQ-QDILAHPKVKLFIMQGGLQSLQ 217 (357)
Q Consensus 166 ~---~~~~viw~~~-~~~~-------~--~~~--------------~nv~~~~~~pq-~~lL~h~~~~~~ithgG~~s~~ 217 (357)
+ +.+.|++.+. +... . ... +++.+..+..+ .+++ ..++++||..|..| .
T Consensus 233 L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l--~~ADlvI~rSGt~T-~ 309 (396)
T TIGR03492 233 LPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEIL--HWADLGIAMAGTAT-E 309 (396)
T ss_pred HhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHH--HhCCEEEECcCHHH-H
Confidence 4 3448888873 3211 1 111 12555555544 4566 45999999999766 9
Q ss_pred HHHhcCceEEeecCCCChHHHHHHHHHh----ceeeeeeccCCCHHHHHHHHHHHhcCcchhhccc
Q psy2178 218 EAFHYGVKLICIPMFADQDLNCQRVGKI----KTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGW 279 (357)
Q Consensus 218 eal~~GvP~i~~P~~~dQ~~na~~v~~~----G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 279 (357)
|+...|+|+|.+|.-..|. |+..+++. |.++.+. +.+.+.+.+++.++++|++.++++.
T Consensus 310 E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~--~~~~~~l~~~l~~ll~d~~~~~~~~ 372 (396)
T TIGR03492 310 QAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLA--SKNPEQAAQVVRQLLADPELLERCR 372 (396)
T ss_pred HHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecC--CCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 9999999999999877887 98777663 6566654 3456899999999999876654443
No 48
>PLN02207 UDP-glycosyltransferase
Probab=98.28 E-value=1.3e-06 Score=85.66 Aligned_cols=65 Identities=22% Similarity=0.434 Sum_probs=52.5
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCcC-------CC----CCCCeEeecCCChhhhhC
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM-------EG----LGENIRLQKWMPQQDILG 356 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~~-------~~----~~~n~~~~~w~pQ~~~l~ 356 (357)
+.+.+|+|+||||.. .++....++++.+|.+.+ ++|||+++++.. .+ .+.|.++++|+||.++|+
T Consensus 272 ~~~~sVVyvSfGS~~---~~~~~q~~ela~~l~~~~-~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~ 347 (468)
T PLN02207 272 QPEASVVFLCFGSMG---RLRGPLVKEIAHGLELCQ-YRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILA 347 (468)
T ss_pred CCCCcEEEEEeccCc---CCCHHHHHHHHHHHHHCC-CcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhc
Confidence 445799999999975 456667789999999999 599999985221 12 468899999999999996
No 49
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=98.25 E-value=1.9e-06 Score=84.33 Aligned_cols=68 Identities=24% Similarity=0.432 Sum_probs=54.6
Q ss_pred ccC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC---------c-------CCC----CCCCeE
Q psy2178 286 MDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND---------V-------MEG----LGENIR 344 (357)
Q Consensus 286 ~~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~---------~-------~~~----~~~n~~ 344 (357)
.|+ .+++|+|+||||.. +++....+++..+|.+.++ +|||++++. . +++ .+.|.+
T Consensus 255 Ld~~~~~sVvyvsfGS~~---~l~~~q~~ela~gL~~s~~-~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~ 330 (455)
T PLN02152 255 LDSKTESSVIYVSFGTMV---ELSKKQIEELARALIEGKR-PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGM 330 (455)
T ss_pred hhCCCCCceEEEEecccc---cCCHHHHHHHHHHHHHcCC-CeEEEEecCcccccccccccccccccchhHHHhccCCeE
Confidence 344 45699999999975 6777788899999999995 999999751 0 222 568899
Q ss_pred eecCCChhhhhCC
Q psy2178 345 LQKWMPQQDILGT 357 (357)
Q Consensus 345 ~~~w~pQ~~~l~~ 357 (357)
+.+|+||.++|+.
T Consensus 331 v~~W~PQ~~iL~h 343 (455)
T PLN02152 331 IVSWCSQIEVLRH 343 (455)
T ss_pred EEeeCCHHHHhCC
Confidence 9999999999963
No 50
>PLN02670 transferase, transferring glycosyl groups
Probab=98.21 E-value=2.4e-06 Score=83.97 Aligned_cols=69 Identities=25% Similarity=0.507 Sum_probs=54.2
Q ss_pred hhccC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCc------CCCCCCC---------eEeec
Q psy2178 284 KWMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV------MEGLGEN---------IRLQK 347 (357)
Q Consensus 284 ~~~~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~------~~~~~~n---------~~~~~ 347 (357)
.+.|+ .+++|+|+||||.. +++....+++..+|.+.++ +|||+++.+. ...+|+| +.+++
T Consensus 270 ~wLd~~~~~sVvyvsfGS~~---~l~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~ 345 (472)
T PLN02670 270 EWLDKQRVNSVVYVALGTEA---SLRREEVTELALGLEKSET-PFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVG 345 (472)
T ss_pred HHHhcCCCCceEEEEecccc---cCCHHHHHHHHHHHHHCCC-CEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeC
Confidence 33444 45799999999974 6777888899999999995 9999998631 1235555 77889
Q ss_pred CCChhhhhC
Q psy2178 348 WMPQQDILG 356 (357)
Q Consensus 348 w~pQ~~~l~ 356 (357)
|+||.++|+
T Consensus 346 W~PQ~~IL~ 354 (472)
T PLN02670 346 WVPQVKILS 354 (472)
T ss_pred cCCHHHHhc
Confidence 999999996
No 51
>PLN02562 UDP-glycosyltransferase
Probab=98.19 E-value=2.7e-06 Score=83.42 Aligned_cols=70 Identities=21% Similarity=0.543 Sum_probs=54.2
Q ss_pred hhccC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC----cCCC----CCCCeEeecCCChhhh
Q psy2178 284 KWMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND----VMEG----LGENIRLQKWMPQQDI 354 (357)
Q Consensus 284 ~~~~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~----~~~~----~~~n~~~~~w~pQ~~~ 354 (357)
.+.++ .+.+++|+||||.. ..++....+.++.+|++.++ +|||++... .+++ +++|+++.+|+||.++
T Consensus 265 ~wLd~~~~~svvyvsfGS~~--~~~~~~~~~~l~~~l~~~g~-~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~i 341 (448)
T PLN02562 265 GWLQEQKPNSVIYISFGSWV--SPIGESNVRTLALALEASGR-PFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEV 341 (448)
T ss_pred HHHhcCCCCceEEEEecccc--cCCCHHHHHHHHHHHHHCCC-CEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHH
Confidence 33444 35689999999975 35566777899999999995 999999531 2222 5689999999999999
Q ss_pred hC
Q psy2178 355 LG 356 (357)
Q Consensus 355 l~ 356 (357)
|+
T Consensus 342 L~ 343 (448)
T PLN02562 342 LK 343 (448)
T ss_pred hC
Confidence 96
No 52
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=98.19 E-value=2.4e-06 Score=84.03 Aligned_cols=68 Identities=26% Similarity=0.488 Sum_probs=53.4
Q ss_pred hccC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC------------------c--CCCCCC--
Q psy2178 285 WMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND------------------V--MEGLGE-- 341 (357)
Q Consensus 285 ~~~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~------------------~--~~~~~~-- 341 (357)
+.|+ .+++|+|+||||. ..++....++|..+|.+.++ +|||+++.. . ...+|+
T Consensus 256 wLd~~~~~sVvyvsfGS~---~~l~~~q~~ela~gL~~s~~-~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f 331 (481)
T PLN02992 256 WLNKQPNESVLYISFGSG---GSLSAKQLTELAWGLEMSQQ-RFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGF 331 (481)
T ss_pred HHHcCCCCceEEEeeccc---ccCCHHHHHHHHHHHHHcCC-CEEEEEeCCcccccccccccCcccccccchhhhCCHHH
Confidence 3443 4679999999997 57788888899999999995 999999520 0 112555
Q ss_pred -------CeEeecCCChhhhhC
Q psy2178 342 -------NIRLQKWMPQQDILG 356 (357)
Q Consensus 342 -------n~~~~~w~pQ~~~l~ 356 (357)
|+.+.+|+||.++|+
T Consensus 332 ~eR~~~rg~vv~~W~PQ~~iL~ 353 (481)
T PLN02992 332 VSRTHDRGFVVPSWAPQAEILA 353 (481)
T ss_pred HHHhcCCCEEEeecCCHHHHhC
Confidence 599999999999996
No 53
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.11 E-value=1e-05 Score=77.52 Aligned_cols=188 Identities=14% Similarity=0.055 Sum_probs=100.4
Q ss_pred CeeEEEEcCCCccccCCCCCCCeEEeCccccCC-C-CCCchHHHHHhccC-CCceEEEecCCccccCCCcHHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKLVEVGPLHLVD-P-KPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKA 162 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~-~-~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~a 162 (357)
.+|.+++.+...-+.-....-+++++|.-..+. . .....++.+-+.-. ++++|++..||.... .......++++
T Consensus 134 ~~d~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~---~~~~~~~l~~a 210 (380)
T PRK00025 134 ATDHVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQE---IKRLLPPFLKA 210 (380)
T ss_pred HHhhheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHH---HHHHHHHHHHH
Confidence 356666666544332222223478888433221 1 11122333333322 345666666765431 11234445554
Q ss_pred HHh----CCCceEEEEEc-CCc---c----CCC-CCcEEEeecCCh-hhhhcCccceEEEeeCchhhHHHHHhcCceEEe
Q psy2178 163 FAR----LPQYRVLWKWE-NDV---M----EGL-GENIRLQKWMPQ-QDILAHPKVKLFIMQGGLQSLQEAFHYGVKLIC 228 (357)
Q Consensus 163 l~~----~~~~~viw~~~-~~~---~----~~~-~~nv~~~~~~pq-~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~ 228 (357)
++. .+.+++++..+ +.. + ... .-++.+.. +. .+++ ..+|++|+.+|.+++ |++++|+|+|.
T Consensus 211 ~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~--~~aDl~v~~sG~~~l-Ea~a~G~PvI~ 285 (380)
T PRK00025 211 AQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD--GQKREAM--AAADAALAASGTVTL-ELALLKVPMVV 285 (380)
T ss_pred HHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc--ccHHHHH--HhCCEEEECccHHHH-HHHHhCCCEEE
Confidence 432 33446777655 221 1 111 22343322 22 3556 459999999998887 99999999999
Q ss_pred ecCCC--------ChHHH-----HHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccc
Q psy2178 229 IPMFA--------DQDLN-----CQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMS 281 (357)
Q Consensus 229 ~P~~~--------dQ~~n-----a~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 281 (357)
.|-.. +|..| +..+.+.+++..+...+.+.+++.+++.++++|++.++.+.+-
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 351 (380)
T PRK00025 286 GYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEG 351 (380)
T ss_pred EEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 95432 11111 1222233333334445678999999999999998776644443
No 54
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.09 E-value=0.00011 Score=68.92 Aligned_cols=184 Identities=13% Similarity=0.125 Sum_probs=106.4
Q ss_pred CeeEEEEcCCCccccCCC-CCCCeEEeCccccCC---CCCCc-hHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARP-MQRKLVEVGPLHLVD---PKPLD-ESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFL 160 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~-~~p~v~~vG~l~~~~---~~~l~-~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~ 160 (357)
.+|.+++.|....+.... ...++..+....... +..-+ .....+ . .+++.+++..|+..... ..+.+-+++
T Consensus 144 ~~d~i~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~G~~~~~k--~~~~~i~~~ 219 (364)
T cd03814 144 RADRVLVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARL-G-PPDRPVLLYVGRLAPEK--NLEALLDAD 219 (364)
T ss_pred hCCEEEeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHh-C-CCCCeEEEEEecccccc--CHHHHHHHH
Confidence 678888888776553222 123444443322111 11111 112222 2 22345677778765421 223233333
Q ss_pred HHHHhCCCceEEEEEcCCc---cCCCCCcEEEeecCChhh---hhcCccceEEEeeCc----hhhHHHHHhcCceEEeec
Q psy2178 161 KAFARLPQYRVLWKWENDV---MEGLGENIRLQKWMPQQD---ILAHPKVKLFIMQGG----LQSLQEAFHYGVKLICIP 230 (357)
Q Consensus 161 ~al~~~~~~~viw~~~~~~---~~~~~~nv~~~~~~pq~~---lL~h~~~~~~ithgG----~~s~~eal~~GvP~i~~P 230 (357)
+.+.+.+.+++++.-++.. .....+|+.+.+++++.+ ++ ..+++++..+. .++++||+++|+|+|+.+
T Consensus 220 ~~l~~~~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~ 297 (364)
T cd03814 220 LPLRRRPPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAY--ASADVFVFPSRTETFGLVVLEAMASGLPVVAPD 297 (364)
T ss_pred HHhhhcCCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHH--HhCCEEEECcccccCCcHHHHHHHcCCCEEEcC
Confidence 3333223335555433322 123467899999999765 56 45888887754 378999999999999987
Q ss_pred CCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccc
Q psy2178 231 MFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMS 281 (357)
Q Consensus 231 ~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 281 (357)
..+ +...+.+.+.|.... .-+.+++.+++.+++.|++.++++.+-
T Consensus 298 ~~~----~~~~i~~~~~g~~~~--~~~~~~l~~~i~~l~~~~~~~~~~~~~ 342 (364)
T cd03814 298 AGG----PADIVTDGENGLLVE--PGDAEAFAAALAALLADPELRRRMAAR 342 (364)
T ss_pred CCC----chhhhcCCcceEEcC--CCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 654 344555567887765 336788999999999987765544433
No 55
>PLN02554 UDP-glycosyltransferase family protein
Probab=98.05 E-value=6.2e-06 Score=81.66 Aligned_cols=64 Identities=22% Similarity=0.488 Sum_probs=50.3
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC-----------------c-CCC----CCCCeEee
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND-----------------V-MEG----LGENIRLQ 346 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~-----------------~-~~~----~~~n~~~~ 346 (357)
.+.+|+|+||||. ..++....++++++|++.+ ++|||+++.. . +.+ .+.|+++.
T Consensus 272 ~~~svvyvsfGS~---~~~~~~~~~~la~~l~~~~-~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~ 347 (481)
T PLN02554 272 PPKSVVFLCFGSM---GGFSEEQAREIAIALERSG-HRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVI 347 (481)
T ss_pred CCCcEEEEecccc---ccCCHHHHHHHHHHHHHcC-CCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEE
Confidence 4468999999996 3555667789999999999 5999999741 1 222 45788999
Q ss_pred cCCChhhhhC
Q psy2178 347 KWMPQQDILG 356 (357)
Q Consensus 347 ~w~pQ~~~l~ 356 (357)
+|+||.++|+
T Consensus 348 ~W~PQ~~iL~ 357 (481)
T PLN02554 348 GWAPQVAVLA 357 (481)
T ss_pred eeCCHHHHhC
Confidence 9999999995
No 56
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=98.01 E-value=1.1e-05 Score=79.01 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=52.4
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC------c----CCC----CCCCeEeecCCChhh
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND------V----MEG----LGENIRLQKWMPQQD 353 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~------~----~~~----~~~n~~~~~w~pQ~~ 353 (357)
+.+.+|+|+||||.. .++....++++.+|...++ +|||+++.+ . +.+ .+.|.++.+|+||.+
T Consensus 261 ~~~~sVvyvsfGS~~---~~~~~q~~ela~gLe~s~~-~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~ 336 (451)
T PLN02410 261 QKKNSVIFVSLGSLA---LMEINEVMETASGLDSSNQ-QFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKE 336 (451)
T ss_pred CCCCcEEEEEccccc---cCCHHHHHHHHHHHHhcCC-CeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHH
Confidence 345789999999975 4566777889999999996 999999832 1 222 568999999999999
Q ss_pred hhC
Q psy2178 354 ILG 356 (357)
Q Consensus 354 ~l~ 356 (357)
+|+
T Consensus 337 iL~ 339 (451)
T PLN02410 337 VLS 339 (451)
T ss_pred HhC
Confidence 996
No 57
>PLN02208 glycosyltransferase family protein
Probab=97.98 E-value=1.2e-05 Score=78.67 Aligned_cols=65 Identities=26% Similarity=0.414 Sum_probs=47.6
Q ss_pred CCCcceEEEEeecccccCcCchHHHHH-HHH-HHccCCCceEEEeecCC---cCCCCC---------CCeEeecCCChhh
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKA-FLK-AFARLPQYRVLWKWEND---VMEGLG---------ENIRLQKWMPQQD 353 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~-f~~-~~~~lp~~~v~wk~~~~---~~~~~~---------~n~~~~~w~pQ~~ 353 (357)
+.+++|+|+||||.. .++.....+ .+. +++++| +.++||++.+ ....+| +|+.+.+|+||.+
T Consensus 248 ~~~~sVvyvSfGS~~---~l~~~q~~e~~~~l~~s~~p-f~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~ 323 (442)
T PLN02208 248 FPPKSVVFCSLGSQI---ILEKDQFQELCLGMELTGLP-FLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPL 323 (442)
T ss_pred CCCCcEEEEeccccc---cCCHHHHHHHHHHHHhCCCc-EEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHH
Confidence 345799999999976 355553334 454 489999 5999998622 122355 7999999999999
Q ss_pred hhC
Q psy2178 354 ILG 356 (357)
Q Consensus 354 ~l~ 356 (357)
+|+
T Consensus 324 iL~ 326 (442)
T PLN02208 324 ILD 326 (442)
T ss_pred Hhc
Confidence 996
No 58
>PLN03015 UDP-glucosyl transferase
Probab=97.97 E-value=1.3e-05 Score=78.63 Aligned_cols=66 Identities=21% Similarity=0.401 Sum_probs=52.9
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC------------cC-CCCCCC---------eEe
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND------------VM-EGLGEN---------IRL 345 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~------------~~-~~~~~n---------~~~ 345 (357)
+.+.+|+|+||||. ..++....+++..+|...++ +|||++... .. ..+|+| +.+
T Consensus 264 ~~~~sVvyvsFGS~---~~~~~~q~~ela~gl~~s~~-~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v 339 (470)
T PLN03015 264 QGERSVVYVCLGSG---GTLTFEQTVELAWGLELSGQ-RFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVV 339 (470)
T ss_pred CCCCCEEEEECCcC---CcCCHHHHHHHHHHHHhCCC-cEEEEEecCccccccccccccchhhcCChHHHHhhccCceEE
Confidence 34679999999996 46777778899999999995 999999621 12 247778 678
Q ss_pred ecCCChhhhhCC
Q psy2178 346 QKWMPQQDILGT 357 (357)
Q Consensus 346 ~~w~pQ~~~l~~ 357 (357)
.+|+||.++|+.
T Consensus 340 ~~W~PQ~~vL~h 351 (470)
T PLN03015 340 TQWAPQVEILSH 351 (470)
T ss_pred EecCCHHHHhcc
Confidence 899999999973
No 59
>PLN02555 limonoid glucosyltransferase
Probab=97.92 E-value=2.1e-05 Score=77.61 Aligned_cols=65 Identities=23% Similarity=0.466 Sum_probs=50.1
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC---------c-----CCCCCCCeEeecCCChhh
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND---------V-----MEGLGENIRLQKWMPQQD 353 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~---------~-----~~~~~~n~~~~~w~pQ~~ 353 (357)
+.+.+|+|+||||.. .++....++++.++.+.+ ++|||++... . ...++.|+++++|+||.+
T Consensus 274 ~~~~sVvyvsfGS~~---~~~~~q~~ela~~l~~~~-~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~ 349 (480)
T PLN02555 274 KPPSSVVYISFGTVV---YLKQEQIDEIAYGVLNSG-VSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEK 349 (480)
T ss_pred CCCCceeEEEecccc---CCCHHHHHHHHHHHHhcC-CeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHH
Confidence 344689999999964 455666778999999999 4999998621 0 113457999999999999
Q ss_pred hhC
Q psy2178 354 ILG 356 (357)
Q Consensus 354 ~l~ 356 (357)
+|+
T Consensus 350 iL~ 352 (480)
T PLN02555 350 VLA 352 (480)
T ss_pred HhC
Confidence 995
No 60
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.89 E-value=0.00033 Score=65.83 Aligned_cols=132 Identities=20% Similarity=0.244 Sum_probs=87.0
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc---------CCCCCcEEEeecCChhh---hhcCc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQQD---ILAHP 202 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~~---lL~h~ 202 (357)
...+++..|+... .+-...++++++++..+++++.-.+... ....+|+.+.+++|+.+ ++ .
T Consensus 190 ~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~--~ 262 (357)
T cd03795 190 GRPFFLFVGRLVY-----YKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALL--A 262 (357)
T ss_pred CCcEEEEeccccc-----ccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHH--H
Confidence 4457788888754 3345567777777764366655443221 23467999999999854 55 3
Q ss_pred cceEEEe-----eCc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHH-hceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 203 KVKLFIM-----QGG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGK-IKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 203 ~~~~~it-----hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~-~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
.+++++. +.| ..++.||+++|+|+|+-...+.... +.+ .+.|...+. -+.+++.++|.++++|++.+
T Consensus 263 ~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~----i~~~~~~g~~~~~--~d~~~~~~~i~~l~~~~~~~ 336 (357)
T cd03795 263 ACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY----VNLHGVTGLVVPP--GDPAALAEAIRRLLEDPELR 336 (357)
T ss_pred hCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhH----HhhCCCceEEeCC--CCHHHHHHHHHHHHHCHHHH
Confidence 4777662 223 3479999999999999765544332 332 456766653 36899999999999987655
Q ss_pred hccc
Q psy2178 276 KSGW 279 (357)
Q Consensus 276 ~~a~ 279 (357)
+...
T Consensus 337 ~~~~ 340 (357)
T cd03795 337 ERLG 340 (357)
T ss_pred HHHH
Confidence 4333
No 61
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.82 E-value=0.00028 Score=56.13 Aligned_cols=110 Identities=15% Similarity=0.254 Sum_probs=70.5
Q ss_pred EEEecCCccccCCCcHHHHH-HHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeec--CChhhhhcCccceEEEeeCchh
Q psy2178 138 IYFSLGTNMKGTSMGDFRRK-AFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKW--MPQQDILAHPKVKLFIMQGGLQ 214 (357)
Q Consensus 138 v~vs~GS~~~~~~~~~~~~~-~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~--~pq~~lL~h~~~~~~ithgG~~ 214 (357)
++|+-||... .+..-.+. + ..-+.+..+-++|..+|..+...... ..+.+| .+-..-|.| .++++|+|+|.|
T Consensus 2 ifVTvGstf~--~f~rlv~k~e-~~el~~~i~e~lIvQyGn~d~kpvag-l~v~~F~~~~kiQsli~-darIVISHaG~G 76 (161)
T COG5017 2 IFVTVGSTFY--PFNRLVLKIE-VLELTELIQEELIVQYGNGDIKPVAG-LRVYGFDKEEKIQSLIH-DARIVISHAGEG 76 (161)
T ss_pred eEEEecCccc--hHHHHHhhHH-HHHHHHHhhhheeeeecCCCcccccc-cEEEeechHHHHHHHhh-cceEEEeccCcc
Confidence 6889999853 12121111 1 22222333338899998855433222 355444 455454555 478999999999
Q ss_pred hHHHHHhcCceEEeecCC--------CChHHHHHHHHHhceeeeee
Q psy2178 215 SLQEAFHYGVKLICIPMF--------ADQDLNCQRVGKIKTGIVLE 252 (357)
Q Consensus 215 s~~eal~~GvP~i~~P~~--------~dQ~~na~~v~~~G~g~~l~ 252 (357)
|++.++..++|.|++|-- .+|..-|..+.+.+.-....
T Consensus 77 SIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~s 122 (161)
T COG5017 77 SILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACS 122 (161)
T ss_pred hHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEc
Confidence 999999999999999953 25666677777776655543
No 62
>PLN03007 UDP-glucosyltransferase family protein
Probab=97.80 E-value=4.4e-05 Score=75.69 Aligned_cols=69 Identities=25% Similarity=0.533 Sum_probs=51.7
Q ss_pred hccC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC--------cCC-C-----CCCCeEeecCC
Q psy2178 285 WMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND--------VME-G-----LGENIRLQKWM 349 (357)
Q Consensus 285 ~~~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~--------~~~-~-----~~~n~~~~~w~ 349 (357)
+.++ .+.+++|+||||.. ........+++++|...+ ++|||++..+ .++ + .++|+.+.+|+
T Consensus 278 wLd~~~~~svvyvsfGS~~---~~~~~~~~~~~~~l~~~~-~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~ 353 (482)
T PLN03007 278 WLDSKKPDSVIYLSFGSVA---SFKNEQLFEIAAGLEGSG-QNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWA 353 (482)
T ss_pred HHhcCCCCceEEEeecCCc---CCCHHHHHHHHHHHHHCC-CCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCC
Confidence 3344 45789999999963 334455668999999999 5999998742 122 2 36799999999
Q ss_pred ChhhhhCC
Q psy2178 350 PQQDILGT 357 (357)
Q Consensus 350 pQ~~~l~~ 357 (357)
||.++|+.
T Consensus 354 PQ~~iL~h 361 (482)
T PLN03007 354 PQVLILDH 361 (482)
T ss_pred CHHHHhcc
Confidence 99999973
No 63
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.75 E-value=0.00027 Score=63.35 Aligned_cols=138 Identities=17% Similarity=0.086 Sum_probs=101.7
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc--cC------CCCCcEEEeecCChhhhhcCccceEEE
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--ME------GLGENIRLQKWMPQQDILAHPKVKLFI 208 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~--~~------~~~~nv~~~~~~pq~~lL~h~~~~~~i 208 (357)
=|+|++|..- +..+.-.++..+.+.+. .+-.+++... +. ...+|+.+......+.-|. ..+++.|
T Consensus 160 ~ilI~lGGsD-----pk~lt~kvl~~L~~~~~-nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LM-ke~d~aI 232 (318)
T COG3980 160 DILITLGGSD-----PKNLTLKVLAELEQKNV-NLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELM-KEADLAI 232 (318)
T ss_pred eEEEEccCCC-----hhhhHHHHHHHhhccCe-eEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHH-Hhcchhe
Confidence 3999998763 45677778888877775 6666666322 11 2356777766666554343 4699999
Q ss_pred eeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccchh
Q psy2178 209 MQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQ 283 (357)
Q Consensus 209 thgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~ 283 (357)
+-||. |+.|++..|+|.+++|+...|---|...+..|+-..+... +..+.....+.++..|...|++.-..++
T Consensus 233 ~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 233 SAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-LKDLAKDYEILQIQKDYARRKNLSFGSK 305 (318)
T ss_pred eccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-CchHHHHHHHHHhhhCHHHhhhhhhccc
Confidence 98875 8999999999999999999999999999999988877644 6677777778888877776665544443
No 64
>PLN02534 UDP-glycosyltransferase
Probab=97.73 E-value=5.6e-05 Score=74.73 Aligned_cols=66 Identities=21% Similarity=0.342 Sum_probs=51.0
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC---------cC-C-----CCCCCeEeecCCChh
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND---------VM-E-----GLGENIRLQKWMPQQ 352 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~---------~~-~-----~~~~n~~~~~w~pQ~ 352 (357)
+.+.+|+|+||||.. .+......++..+|++.++ +|||+++.+ .+ + ..++|+.+.+|+||.
T Consensus 280 ~~~~sVvyvsfGS~~---~~~~~q~~e~a~gl~~~~~-~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~ 355 (491)
T PLN02534 280 MKPRSVIYACLGSLC---RLVPSQLIELGLGLEASKK-PFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQV 355 (491)
T ss_pred CCCCceEEEEecccc---cCCHHHHHHHHHHHHhCCC-CEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHH
Confidence 345699999999975 3445556678899999996 999999832 11 1 247899999999999
Q ss_pred hhhCC
Q psy2178 353 DILGT 357 (357)
Q Consensus 353 ~~l~~ 357 (357)
++|++
T Consensus 356 ~iL~h 360 (491)
T PLN02534 356 LILSH 360 (491)
T ss_pred HHhcC
Confidence 99974
No 65
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.65 E-value=0.00068 Score=57.07 Aligned_cols=139 Identities=20% Similarity=0.193 Sum_probs=87.7
Q ss_pred cCCCceEEEecCCccccCCCcHHHHHHHHHHHHh-CCCceEEEEEc-CCc---------cCCCCCcEEEeecCChh---h
Q psy2178 132 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR-LPQYRVLWKWE-NDV---------MEGLGENIRLQKWMPQQ---D 197 (357)
Q Consensus 132 ~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~-~~~~~viw~~~-~~~---------~~~~~~nv~~~~~~pq~---~ 197 (357)
..+++.+++..|.....+ -...+++.+.....+ .+. -.++.++ +.. .....+++.+.++.++. .
T Consensus 11 ~~~~~~~il~~g~~~~~K-~~~~li~a~~~l~~~~~~~-~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEK-GIDLLIEAFKKLKEKKNPN-YKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp T-TTSEEEEEESESSGGG-THHHHHHHHHHHHHHHHTT-EEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCCCCeEEEEEecCcccc-CHHHHHHHHHHHHhhcCCC-eEEEEEccccccccccccccccccccccccccccccccccc
Confidence 335667888888886532 223333333333222 445 3344444 221 12456899999999833 4
Q ss_pred hhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcc
Q psy2178 198 ILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQ 273 (357)
Q Consensus 198 lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~ 273 (357)
++ ..++++++. |...++.||+++|+|+|+-- ...+...+.+.+.|..++.. +.+++.++|.+++++++
T Consensus 89 ~~--~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~~~~~~g~~~~~~--~~~~l~~~i~~~l~~~~ 160 (172)
T PF00534_consen 89 LY--KSSDIFVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEIINDGVNGFLFDPN--DIEELADAIEKLLNDPE 160 (172)
T ss_dssp HH--HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHSGTTTSEEEESTT--SHHHHHHHHHHHHHHHH
T ss_pred cc--ccceeccccccccccccccccccccccceeecc----ccCCceeeccccceEEeCCC--CHHHHHHHHHHHHCCHH
Confidence 55 348888877 66779999999999999864 33445555566678888644 88999999999999886
Q ss_pred hhhcccc
Q psy2178 274 VFKSGWM 280 (357)
Q Consensus 274 ~~~~a~~ 280 (357)
.++.+.+
T Consensus 161 ~~~~l~~ 167 (172)
T PF00534_consen 161 LRQKLGK 167 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555444
No 66
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.62 E-value=0.0012 Score=61.73 Aligned_cols=131 Identities=19% Similarity=0.295 Sum_probs=80.5
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc---------CCCCCcEEEeecCChhh---hhcCc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQQD---ILAHP 202 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~~---lL~h~ 202 (357)
++.+++..|+..... -...+++.+.....+.+.+++++.-++... ....+++.+.+++|+.+ ++.
T Consensus 201 ~~~~i~~~G~~~~~k-~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~-- 277 (374)
T cd03817 201 DEPVLLYVGRLAKEK-NIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYK-- 277 (374)
T ss_pred CCeEEEEEeeeeccc-CHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHH--
Confidence 455677778776422 122223322222222233355555433221 23467899999999865 453
Q ss_pred cceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 203 KVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 203 ~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
++++++.. |...++.||+++|+|+|+....+ .+..+.+.+.|..++..+ . ++.+++.+++++++.+
T Consensus 278 ~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~----~~~~i~~~~~g~~~~~~~--~-~~~~~i~~l~~~~~~~ 347 (374)
T cd03817 278 AADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPG----LPDLVADGENGFLFPPGD--E-ALAEALLRLLQDPELR 347 (374)
T ss_pred HcCEEEecccccCcChHHHHHHHcCCcEEEeCCCC----hhhheecCceeEEeCCCC--H-HHHHHHHHHHhChHHH
Confidence 47777744 33478999999999999976432 344455556777776433 2 8999999999887643
No 67
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.62 E-value=0.00039 Score=64.91 Aligned_cols=132 Identities=16% Similarity=0.194 Sum_probs=84.2
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhC--CCceEEEEEcCCccC------CCCCcEEEeecCChhh---hhcCc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL--PQYRVLWKWENDVME------GLGENIRLQKWMPQQD---ILAHP 202 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~--~~~~viw~~~~~~~~------~~~~nv~~~~~~pq~~---lL~h~ 202 (357)
+.+.+++..|+.... +-...++++++.+ +.+++++.-.+.... ...+++.+.+++++.+ ++ .
T Consensus 189 ~~~~~i~~~G~~~~~-----k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~ 261 (359)
T cd03823 189 GGRLRFGFIGQLTPH-----KGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFY--A 261 (359)
T ss_pred CCceEEEEEecCccc-----cCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHH--H
Confidence 345677788887642 2233444444443 243665543332211 2357899999998654 46 4
Q ss_pred cceEEEee----C-chhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhc
Q psy2178 203 KVKLFIMQ----G-GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKS 277 (357)
Q Consensus 203 ~~~~~ith----g-G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~ 277 (357)
+++++|+. . ...++.||+++|+|+|+-+..+ ....+.+.+.|..++.. +.+++.+++.+++++++.++.
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~~ 335 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGG----MAELVRDGVNGLLFPPG--DAEDLAAALERLIDDPDLLER 335 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCC----HHHHhcCCCcEEEECCC--CHHHHHHHHHHHHhChHHHHH
Confidence 57777742 3 3357999999999999876432 44555555567777643 489999999999988765443
Q ss_pred c
Q psy2178 278 G 278 (357)
Q Consensus 278 a 278 (357)
+
T Consensus 336 ~ 336 (359)
T cd03823 336 L 336 (359)
T ss_pred H
Confidence 3
No 68
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.61 E-value=0.0016 Score=60.37 Aligned_cols=180 Identities=16% Similarity=0.239 Sum_probs=103.5
Q ss_pred CeeEEEEcCCCccccCCCC-C---CCeEEeCccccCC-CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARPM-Q---RKLVEVGPLHLVD-PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFL 160 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~-~---p~v~~vG~l~~~~-~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~ 160 (357)
.++.+++.|....+..... . .++..+..-.... ....+.+...-....++..+++.+|+... .+-...++
T Consensus 144 ~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-----~k~~~~~i 218 (374)
T cd03801 144 RADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVP-----RKGVDLLL 218 (374)
T ss_pred hCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCCcCCCeEEEEecchhh-----hcCHHHHH
Confidence 5788888887766543221 1 2455554332111 11111111111122234567788888764 22233444
Q ss_pred HHHHhC----CCceEEEEEcCCc---c------CCCCCcEEEeecCChh---hhhcCccceEEEee----CchhhHHHHH
Q psy2178 161 KAFARL----PQYRVLWKWENDV---M------EGLGENIRLQKWMPQQ---DILAHPKVKLFIMQ----GGLQSLQEAF 220 (357)
Q Consensus 161 ~al~~~----~~~~viw~~~~~~---~------~~~~~nv~~~~~~pq~---~lL~h~~~~~~ith----gG~~s~~eal 220 (357)
+++..+ +.+++++.-++.. . ....+++.+.+++++. +++ .+++++|.- |..+++.||+
T Consensus 219 ~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~~di~i~~~~~~~~~~~~~Ea~ 296 (374)
T cd03801 219 EALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALY--AAADVFVLPSLYEGFGLVLLEAM 296 (374)
T ss_pred HHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHH--HhcCEEEecchhccccchHHHHH
Confidence 444332 3335444332221 1 1356899999999764 356 347777743 5567899999
Q ss_pred hcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcc
Q psy2178 221 HYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSG 278 (357)
Q Consensus 221 ~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a 278 (357)
++|+|+|+.+.. .....+.+.+.|...+. .+.+++.+++.+++++++.++..
T Consensus 297 ~~g~pvI~~~~~----~~~~~~~~~~~g~~~~~--~~~~~l~~~i~~~~~~~~~~~~~ 348 (374)
T cd03801 297 AAGLPVVASDVG----GIPEVVEDGETGLLVPP--GDPEALAEAILRLLDDPELRRRL 348 (374)
T ss_pred HcCCcEEEeCCC----ChhHHhcCCcceEEeCC--CCHHHHHHHHHHHHcChHHHHHH
Confidence 999999997652 23444554566776653 35899999999999887655433
No 69
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.60 E-value=0.002 Score=59.49 Aligned_cols=178 Identities=14% Similarity=0.179 Sum_probs=99.0
Q ss_pred CeeEEEEcCCCcc-ccCCCCCCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRIT-GYARPMQRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFA 164 (357)
Q Consensus 86 ~~~~~l~~s~~~l-~~~~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~ 164 (357)
.+|.+++.|.... ........++..++.-...... ... ..++..+++.+|+....+ -...+++ .++.+.
T Consensus 135 ~~d~ii~~s~~~~~~~~~~~~~~~~vi~~~~~~~~~--~~~------~~~~~~~i~~~g~~~~~K-~~~~l~~-~~~~l~ 204 (348)
T cd03820 135 RADAVVVLTEEDRALYYKKFNKNVVVIPNPLPFPPE--EPS------SDLKSKRILAVGRLVPQK-GFDLLIE-AWAKIA 204 (348)
T ss_pred cCCEEEEeCHHHHHHhhccCCCCeEEecCCcChhhc--ccc------CCCCCcEEEEEEeecccc-CHHHHHH-HHHHHH
Confidence 6788888887762 2222234456666543321110 000 122344667777765421 1222222 222222
Q ss_pred -hCCCceEEEEEcCCcc---------CCCCCcEEEeecCCh-hhhhcCccceEEEeeC----chhhHHHHHhcCceEEee
Q psy2178 165 -RLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQ-QDILAHPKVKLFIMQG----GLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 165 -~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq-~~lL~h~~~~~~ithg----G~~s~~eal~~GvP~i~~ 229 (357)
..+.+++++.-.+... .....++.+.++... ..++ .+++++|... ..+++.||+++|+|+|+.
T Consensus 205 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~ 282 (348)
T cd03820 205 KKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYY--AKASIFVLTSRFEGFPMVLLEAMAFGLPVISF 282 (348)
T ss_pred hcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHH--HhCCEEEeCccccccCHHHHHHHHcCCCEEEe
Confidence 2344355554332221 123567777777443 3456 3478777664 246899999999999987
Q ss_pred cCCCChHHHHHHHHHhc-eeeeeeccCCCHHHHHHHHHHHhcCcchhhccccc
Q psy2178 230 PMFADQDLNCQRVGKIK-TGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMS 281 (357)
Q Consensus 230 P~~~dQ~~na~~v~~~G-~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 281 (357)
+..+.+. .+.+.+ .|...+. -+.+++.++|.++++|++.++++.+-
T Consensus 283 ~~~~~~~----~~~~~~~~g~~~~~--~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 283 DCPTGPS----EIIEDGVNGLLVPN--GDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred cCCCchH----hhhccCcceEEeCC--CCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 6544332 233444 6777653 35799999999999998766544443
No 70
>PLN00164 glucosyltransferase; Provisional
Probab=97.58 E-value=0.00013 Score=72.30 Aligned_cols=65 Identities=22% Similarity=0.454 Sum_probs=50.2
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCcC-----------C-CCCCC---------eEee
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM-----------E-GLGEN---------IRLQ 346 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~~-----------~-~~~~n---------~~~~ 346 (357)
+.+..|+|+||||. ..++....++++.++...++ +|||+++.... . .+|.| +.+.
T Consensus 269 ~~~~svvyvsfGS~---~~~~~~q~~ela~gL~~s~~-~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~ 344 (480)
T PLN00164 269 QPPASVVFLCFGSM---GFFDAPQVREIAAGLERSGH-RFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWP 344 (480)
T ss_pred CCCCceEEEEeccc---ccCCHHHHHHHHHHHHHcCC-CEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEe
Confidence 34568999999995 45666678899999999995 99999985311 1 14555 7788
Q ss_pred cCCChhhhhC
Q psy2178 347 KWMPQQDILG 356 (357)
Q Consensus 347 ~w~pQ~~~l~ 356 (357)
+|+||.++|+
T Consensus 345 ~w~PQ~~iL~ 354 (480)
T PLN00164 345 TWAPQKEILA 354 (480)
T ss_pred ecCCHHHHhc
Confidence 9999999996
No 71
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.57 E-value=0.00071 Score=64.28 Aligned_cols=181 Identities=14% Similarity=0.144 Sum_probs=105.8
Q ss_pred CeeEEEEcCCCccccC--CCC-CCCeEEeCccccCC-C---CCCchH-HHHHhccCCCceEEEecCCccccCCCcHHHHH
Q psy2178 86 KDSFMFSFDSRITGYA--RPM-QRKLVEVGPLHLVD-P---KPLDES-LQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRK 157 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~--~~~-~p~v~~vG~l~~~~-~---~~l~~~-~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~ 157 (357)
.++.+++.+...-+.- ... +.+++.||.-..+. . .....+ ........++++|++++|..... .+.+.+.
T Consensus 141 ~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~--~~~k~~~ 218 (363)
T cd03786 141 LSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENV--DDGEQLE 218 (363)
T ss_pred HhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCcccc--CChHHHH
Confidence 3566666665544332 123 34577888433221 0 000011 11112222456788888876531 1356677
Q ss_pred HHHHHHHhCCC--ceEEEEEcCC---cc----CCC---CCcEEEeecCChhh---hhcCccceEEEeeCchhhHHHHHhc
Q psy2178 158 AFLKAFARLPQ--YRVLWKWEND---VM----EGL---GENIRLQKWMPQQD---ILAHPKVKLFIMQGGLQSLQEAFHY 222 (357)
Q Consensus 158 ~i~~al~~~~~--~~viw~~~~~---~~----~~~---~~nv~~~~~~pq~~---lL~h~~~~~~ithgG~~s~~eal~~ 222 (357)
.++++++++.. +.+++...+. .+ ... .+++.+.+..++.+ ++ ..++++|+..| +.+.||++.
T Consensus 219 ~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~--~~ad~~v~~Sg-gi~~Ea~~~ 295 (363)
T cd03786 219 EILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLL--KNADLVLTDSG-GIQEEASFL 295 (363)
T ss_pred HHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHH--HcCcEEEEcCc-cHHhhhhhc
Confidence 78888876643 2444432222 11 111 46788877665543 34 45999999998 778899999
Q ss_pred CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcc
Q psy2178 223 GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSG 278 (357)
Q Consensus 223 GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a 278 (357)
|+|+|.++...+ +..+.+.|++..+. + +.+++.+++.++++++..+++.
T Consensus 296 g~PvI~~~~~~~----~~~~~~~g~~~~~~--~-~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 296 GVPVLNLRDRTE----RPETVESGTNVLVG--T-DPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred CCCEEeeCCCCc----cchhhheeeEEecC--C-CHHHHHHHHHHHhcCchhhhcC
Confidence 999999864322 33455667666553 1 4789999999999887665544
No 72
>PLN02173 UDP-glucosyl transferase family protein
Probab=97.56 E-value=0.00019 Score=70.20 Aligned_cols=63 Identities=19% Similarity=0.416 Sum_probs=47.9
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC----cCCC-----CCCCeEeecCCChhhhhCC
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND----VMEG-----LGENIRLQKWMPQQDILGT 357 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~----~~~~-----~~~n~~~~~w~pQ~~~l~~ 357 (357)
.+..++|+||||.. .++.....++..+|+.+| |+|++..+ .+.+ .++|+++.+|+||.++|+.
T Consensus 262 ~~~svvyvsfGS~~---~~~~~~~~ela~gLs~~~---flWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H 333 (449)
T PLN02173 262 PQGSVVYIAFGSMA---KLSSEQMEEIASAISNFS---YLWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSN 333 (449)
T ss_pred CCCceEEEEecccc---cCCHHHHHHHHHHhcCCC---EEEEEeccchhcccchHHHhhcCCceEEeCCCCHHHHhCC
Confidence 34569999999964 466677788999996665 89999732 1222 2689999999999999963
No 73
>PLN02167 UDP-glycosyltransferase family protein
Probab=97.56 E-value=0.00013 Score=72.21 Aligned_cols=64 Identities=25% Similarity=0.409 Sum_probs=48.3
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCc------CCCCCCC--------eEeecCCChhhh
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV------MEGLGEN--------IRLQKWMPQQDI 354 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~------~~~~~~n--------~~~~~w~pQ~~~ 354 (357)
.+..++|+||||.. +++....++++.++.+.+ ++|||++..+. ...+|+| .++..|+||.++
T Consensus 278 ~~~svvyvsfGS~~---~~~~~~~~ela~~l~~~~-~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~i 353 (475)
T PLN02167 278 PESSVVFLCFGSLG---SLPAPQIKEIAQALELVG-CRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEI 353 (475)
T ss_pred CCCceEEEeecccc---cCCHHHHHHHHHHHHhCC-CcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHH
Confidence 45689999999962 355556678999999999 59999987421 1125554 368899999999
Q ss_pred hC
Q psy2178 355 LG 356 (357)
Q Consensus 355 l~ 356 (357)
|+
T Consensus 354 L~ 355 (475)
T PLN02167 354 LA 355 (475)
T ss_pred hc
Confidence 96
No 74
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.55 E-value=0.0031 Score=58.63 Aligned_cols=176 Identities=14% Similarity=0.199 Sum_probs=100.0
Q ss_pred CeeEEEEcCCCccccCCC---CCCCeEEeCccccCC-CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARP---MQRKLVEVGPLHLVD-PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLK 161 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~---~~p~v~~vG~l~~~~-~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~ 161 (357)
.++.+++.|....+.-.. ...++..++...... -...+....+-+....+..+++..|+.... +-.+.+++
T Consensus 148 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~-----k~~~~li~ 222 (377)
T cd03798 148 RADAVIAVSEALADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPR-----KGIDYLIE 222 (377)
T ss_pred cCCeEEeCCHHHHHHHHHhcCCCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccc-----cCHHHHHH
Confidence 577888877665443322 233455555433221 111111111111222345677888887642 22333333
Q ss_pred HHHhC----CCceEEEEEcCCcc---------CCCCCcEEEeecCChhh---hhcCccceEEEee----CchhhHHHHHh
Q psy2178 162 AFARL----PQYRVLWKWENDVM---------EGLGENIRLQKWMPQQD---ILAHPKVKLFIMQ----GGLQSLQEAFH 221 (357)
Q Consensus 162 al~~~----~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~~---lL~h~~~~~~ith----gG~~s~~eal~ 221 (357)
+++.+ +.+++++.-.+... ....+|+.+.+++++.+ ++ .++++++.. |..+++.||++
T Consensus 223 ~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~ad~~i~~~~~~~~~~~~~Ea~~ 300 (377)
T cd03798 223 ALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYY--AAADVFVLPSLREGFGLVLLEAMA 300 (377)
T ss_pred HHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHH--HhcCeeecchhhccCChHHHHHHh
Confidence 33332 23244443222211 13467899999999754 45 346777733 55678999999
Q ss_pred cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcch
Q psy2178 222 YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQV 274 (357)
Q Consensus 222 ~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 274 (357)
+|+|+|+-+..+ ....+.+.+.|...+ .-+.+++.+++.+++++++.
T Consensus 301 ~G~pvI~~~~~~----~~~~~~~~~~g~~~~--~~~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 301 CGLPVVATDVGG----IPEIITDGENGLLVP--PGDPEALAEAILRLLADPWL 347 (377)
T ss_pred cCCCEEEecCCC----hHHHhcCCcceeEEC--CCCHHHHHHHHHHHhcCcHH
Confidence 999999876543 334455555566665 34688999999999988764
No 75
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.52 E-value=0.00017 Score=71.18 Aligned_cols=64 Identities=19% Similarity=0.349 Sum_probs=49.9
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCc--CCC-CCCCeEeecCCChhhhhC
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--MEG-LGENIRLQKWMPQQDILG 356 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~--~~~-~~~n~~~~~w~pQ~~~l~ 356 (357)
....++|+||||... ++....++++++|++.+ ++|||++..+. ... .+.|+++.+|+||.++|+
T Consensus 272 ~~~~vvyvsfGs~~~---~~~~~~~~~~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~v~~w~pQ~~iL~ 338 (459)
T PLN02448 272 PEGSVLYVSLGSFLS---VSSAQMDEIAAGLRDSG-VRFLWVARGEASRLKEICGDMGLVVPWCDQLKVLC 338 (459)
T ss_pred CCCceEEEeeccccc---CCHHHHHHHHHHHHhCC-CCEEEEEcCchhhHhHhccCCEEEeccCCHHHHhc
Confidence 346799999999753 34555779999999999 59999887542 223 246999999999999996
No 76
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.51 E-value=0.003 Score=61.32 Aligned_cols=138 Identities=13% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEE-cCCcc----------CCCCCcEEEeecCChhh---hh
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKW-ENDVM----------EGLGENIRLQKWMPQQD---IL 199 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~-~~~~~----------~~~~~nv~~~~~~pq~~---lL 199 (357)
+++..+++.|.....+. ...+++++.+..++.+...+.|.. ++... ....+++...+|+++.+ ++
T Consensus 228 ~~~~~il~~Grl~~~Kg-~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~ 306 (407)
T cd04946 228 DDTLRIVSCSYLVPVKR-VDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLY 306 (407)
T ss_pred CCCEEEEEeeccccccC-HHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHH
Confidence 34567777888765321 223333333333333323565543 33211 12245788999999865 44
Q ss_pred cCccceEEEeeC----chhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 200 AHPKVKLFIMQG----GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 200 ~h~~~~~~ithg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
....+++|+... --.+++||+++|+|+|+-...+ ....+.+.+.|..+.. .-+.+++.++|.++++|++.+
T Consensus 307 ~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~~~-~~~~~~la~~I~~ll~~~~~~ 381 (407)
T cd04946 307 KENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLLSK-DPTPNELVSSLSKFIDNEEEY 381 (407)
T ss_pred hhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEeCC-CCCHHHHHHHHHHHHhCHHHH
Confidence 434477777543 2468999999999999865433 3344444447877653 336899999999999887654
Q ss_pred hc
Q psy2178 276 KS 277 (357)
Q Consensus 276 ~~ 277 (357)
+.
T Consensus 382 ~~ 383 (407)
T cd04946 382 QT 383 (407)
T ss_pred HH
Confidence 43
No 77
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=97.47 E-value=0.0023 Score=61.17 Aligned_cols=129 Identities=15% Similarity=0.190 Sum_probs=83.6
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhC----CCceEEEEEcCCcc---------------CCCCCcEEEeecCCh
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL----PQYRVLWKWENDVM---------------EGLGENIRLQKWMPQ 195 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~----~~~~viw~~~~~~~---------------~~~~~nv~~~~~~pq 195 (357)
...+++..|+..... -...+++++..+ +.+++++.-++... .++.+++.+.+++|+
T Consensus 219 ~~~~i~~~gr~~~~k-----~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 293 (398)
T cd03800 219 DKPRILAVGRLDPRK-----GIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSR 293 (398)
T ss_pred CCcEEEEEccccccc-----CHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCH
Confidence 345777888876422 233344444333 34466665443211 123478999999998
Q ss_pred hhh---hcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHH
Q psy2178 196 QDI---LAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLV 268 (357)
Q Consensus 196 ~~l---L~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~ 268 (357)
.++ + ..++++++. |-..++.||+++|+|+|+-...+ ....+.+.+.|..++.. +.+++.++|.++
T Consensus 294 ~~~~~~~--~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~~~--~~~~l~~~i~~l 365 (398)
T cd03800 294 EDLPALY--RAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVDPR--DPEALAAALRRL 365 (398)
T ss_pred HHHHHHH--HhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeCCC--CHHHHHHHHHHH
Confidence 654 6 448888854 22368999999999999876543 34445556678877533 589999999999
Q ss_pred hcCcchhh
Q psy2178 269 LEDPQVFK 276 (357)
Q Consensus 269 l~~~~~~~ 276 (357)
+++++.++
T Consensus 366 ~~~~~~~~ 373 (398)
T cd03800 366 LTDPALRR 373 (398)
T ss_pred HhCHHHHH
Confidence 98865443
No 78
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.46 E-value=0.0015 Score=64.52 Aligned_cols=130 Identities=15% Similarity=0.167 Sum_probs=86.4
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---cCC--CCCcEEEeecCChhh---hhcCccceEE
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---MEG--LGENIRLQKWMPQQD---ILAHPKVKLF 207 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---~~~--~~~nv~~~~~~pq~~---lL~h~~~~~~ 207 (357)
..+++..|+... .+-++.+++++++.+.+++++.-++.. +.. ...++.+.+++++.+ ++ ..+++|
T Consensus 263 ~~~i~~vGrl~~-----~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~--~~aDv~ 335 (465)
T PLN02871 263 KPLIVYVGRLGA-----EKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAY--ASGDVF 335 (465)
T ss_pred CeEEEEeCCCch-----hhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHH--HHCCEE
Confidence 345666788754 455677888888887656665443322 111 135789999998654 55 458888
Q ss_pred EeeCc----hhhHHHHHhcCceEEeecCCCChHHHHHHHHH---hceeeeeeccCCCHHHHHHHHHHHhcCcchhhcc
Q psy2178 208 IMQGG----LQSLQEAFHYGVKLICIPMFADQDLNCQRVGK---IKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSG 278 (357)
Q Consensus 208 ithgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~---~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a 278 (357)
|.-.. ..+++||+++|+|+|+-...+ ....+.+ .+.|..++.. +.+++.++|.++++|++.++..
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~~--d~~~la~~i~~ll~~~~~~~~~ 407 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTPG--DVDDCVEKLETLLADPELRERM 407 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHH
Confidence 85432 357899999999999876432 2223334 4667777543 5789999999999987655433
No 79
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.44 E-value=0.0035 Score=60.25 Aligned_cols=133 Identities=15% Similarity=0.158 Sum_probs=80.5
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc------------c----CCCCCcEEEeecCChhh-
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV------------M----EGLGENIRLQKWMPQQD- 197 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~------------~----~~~~~nv~~~~~~pq~~- 197 (357)
...+++..|.....+ -...+++++....++.+.+++++.-++.. + ..+..++.+.+++|+.+
T Consensus 192 ~~~~il~~Grl~~~K-g~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l 270 (380)
T PRK15484 192 DETVLLYAGRISPDK-GILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKM 270 (380)
T ss_pred CCeEEEEeccCcccc-CHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHH
Confidence 345666678876422 22334444433333445545555432211 0 13456888999998654
Q ss_pred --hhcCccceEEEee----Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 198 --ILAHPKVKLFIMQ----GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 198 --lL~h~~~~~~ith----gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
++ ..++++|.. .|. .+++||+++|+|+|+....+ +...+.+...|..+. ...+.+++.++|.++++
T Consensus 271 ~~~~--~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l~-~~~d~~~la~~I~~ll~ 343 (380)
T PRK15484 271 HNYY--PLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHLA-EPMTSDSIISDINRTLA 343 (380)
T ss_pred HHHH--HhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEEe-CCCCHHHHHHHHHHHHc
Confidence 46 457888753 333 57899999999999976533 333444555676442 13368999999999999
Q ss_pred Ccchh
Q psy2178 271 DPQVF 275 (357)
Q Consensus 271 ~~~~~ 275 (357)
|++.+
T Consensus 344 d~~~~ 348 (380)
T PRK15484 344 DPELT 348 (380)
T ss_pred CHHHH
Confidence 87643
No 80
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.43 E-value=0.0032 Score=59.02 Aligned_cols=180 Identities=17% Similarity=0.253 Sum_probs=98.0
Q ss_pred CeeEEEEcCCCccc-cC-CCCCCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITG-YA-RPMQRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAF 163 (357)
Q Consensus 86 ~~~~~l~~s~~~l~-~~-~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al 163 (357)
.+|.+++.|...+. .. .....++..+................. ....+...+++.+|+....+ ....+++.+....
T Consensus 134 ~~d~ii~~s~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~G~~~~~K-~~~~ll~a~~~~~ 211 (366)
T cd03822 134 RADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLKA-LGGLDGRPVLLTFGLLRPYK-GLELLLEALPLLV 211 (366)
T ss_pred cCCEEEEeeHHHHHHHHhhcCCCcEEEeCCCCcCcccCCchhhHh-hcCCCCCeEEEEEeeccCCC-CHHHHHHHHHHHH
Confidence 67888887622222 11 111346666653332211111111111 11223445777788876532 2234444443333
Q ss_pred HhCCCceEEEEEcCCc-c-------------CCCCCcEEEee-cCChh---hhhcCccceEEEee------CchhhHHHH
Q psy2178 164 ARLPQYRVLWKWENDV-M-------------EGLGENIRLQK-WMPQQ---DILAHPKVKLFIMQ------GGLQSLQEA 219 (357)
Q Consensus 164 ~~~~~~~viw~~~~~~-~-------------~~~~~nv~~~~-~~pq~---~lL~h~~~~~~ith------gG~~s~~ea 219 (357)
++.+.+++++.-++.. . ..+.+++.+.+ |+|+. .++ ..+++++.- |..+++.||
T Consensus 212 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~--~~ad~~v~ps~~e~~~~~~~~~Ea 289 (366)
T cd03822 212 AKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELF--SAADVVVLPYRSADQTQSGVLAYA 289 (366)
T ss_pred hhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHH--hhcCEEEecccccccccchHHHHH
Confidence 3334435554432211 0 02356787775 48875 455 457777742 334688999
Q ss_pred HhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhh
Q psy2178 220 FHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFK 276 (357)
Q Consensus 220 l~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~ 276 (357)
+++|+|+|+-+..+ ...+.+.+.|..+... +.+++.+++.+++++++.++
T Consensus 290 ~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~~--d~~~~~~~l~~l~~~~~~~~ 339 (366)
T cd03822 290 IGFGKPVISTPVGH-----AEEVLDGGTGLLVPPG--DPAALAEAIRRLLADPELAQ 339 (366)
T ss_pred HHcCCCEEecCCCC-----hheeeeCCCcEEEcCC--CHHHHHHHHHHHHcChHHHH
Confidence 99999999987654 2334455667766533 58899999999998865443
No 81
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.41 E-value=0.0025 Score=62.21 Aligned_cols=91 Identities=18% Similarity=0.157 Sum_probs=62.4
Q ss_pred cEEEeecCChh-hhhcCccceEEEee-----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHH
Q psy2178 186 NIRLQKWMPQQ-DILAHPKVKLFIMQ-----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEE 259 (357)
Q Consensus 186 nv~~~~~~pq~-~lL~h~~~~~~ith-----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~ 259 (357)
++.+.+...+. .++ ..+++++.. +|..+++||+++|+|+|+-|..+++......+.+.|+++... +.+
T Consensus 303 ~v~l~~~~~el~~~y--~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~----d~~ 376 (425)
T PRK05749 303 DVLLGDTMGELGLLY--AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE----DAE 376 (425)
T ss_pred cEEEEecHHHHHHHH--HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC----CHH
Confidence 34444433332 445 457874432 344569999999999999998888777777766667665533 578
Q ss_pred HHHHHHHHHhcCcchhhccccch
Q psy2178 260 IIFNALKLVLEDPQVFKSGWMSL 282 (357)
Q Consensus 260 ~l~~~i~~~l~~~~~~~~a~~l~ 282 (357)
++.+++.++++|++.++.+.+-+
T Consensus 377 ~La~~l~~ll~~~~~~~~m~~~a 399 (425)
T PRK05749 377 DLAKAVTYLLTDPDARQAYGEAG 399 (425)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999886655444433
No 82
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.41 E-value=0.0017 Score=61.53 Aligned_cols=132 Identities=19% Similarity=0.245 Sum_probs=82.1
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---c----C--CCCCcEEEeecCChhh---hhcCcc
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---M----E--GLGENIRLQKWMPQQD---ILAHPK 203 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---~----~--~~~~nv~~~~~~pq~~---lL~h~~ 203 (357)
+.+++..|+....+ -...+++++.....+.+.+++++.-.+.. + . +..+++.+.+++|+.+ ++ ..
T Consensus 188 ~~~i~~~G~~~~~K-~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~--~~ 264 (367)
T cd05844 188 PPRILFVGRFVEKK-GPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELM--RR 264 (367)
T ss_pred CcEEEEEEeecccc-ChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHH--Hh
Confidence 34566667765422 22333333333333334535444432221 1 1 2467899999998754 46 45
Q ss_pred ceEEEee----------CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcc
Q psy2178 204 VKLFIMQ----------GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQ 273 (357)
Q Consensus 204 ~~~~ith----------gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~ 273 (357)
++++|.. |-.+++.||+++|+|+|+-+..+ ++..+.+.+.|..++. -+.+++.++|.++++|++
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~~~~--~d~~~l~~~i~~l~~~~~ 338 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLLVPE--GDVAALAAALGRLLADPD 338 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEEECC--CCHHHHHHHHHHHHcCHH
Confidence 7777753 23578999999999999877643 4455556677877753 367899999999998876
Q ss_pred hhh
Q psy2178 274 VFK 276 (357)
Q Consensus 274 ~~~ 276 (357)
.++
T Consensus 339 ~~~ 341 (367)
T cd05844 339 LRA 341 (367)
T ss_pred HHH
Confidence 443
No 83
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.41 E-value=0.0035 Score=58.79 Aligned_cols=184 Identities=17% Similarity=0.143 Sum_probs=101.3
Q ss_pred CeeEEEEcCCCccccC--CCC-CCCeEEeCccccCC-CCCC--chHHHHHhccCCCceEEEecCCccccCCCcHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYA--RPM-QRKLVEVGPLHLVD-PKPL--DESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAF 159 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~--~~~-~p~v~~vG~l~~~~-~~~l--~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i 159 (357)
.+|.+++.|....+.- ... ..++..+....... .... +...... ...+++.+++..|+..... ..+.+-..
T Consensus 165 ~~d~vi~~s~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~G~~~~~k--~~~~l~~~ 241 (394)
T cd03794 165 RADAIVVISPGMREYLVRRGVPPEKISVIPNGVDLELFKPPPADESLRKE-LGLDDKFVVLYAGNIGRAQ--GLDTLLEA 241 (394)
T ss_pred cCCEEEEECHHHHHHHHhcCCCcCceEEcCCCCCHHHcCCccchhhhhhc-cCCCCcEEEEEecCccccc--CHHHHHHH
Confidence 5788888777655433 122 23455554322111 1111 1111111 1223456777788876422 22222233
Q ss_pred HHHHHhCCCceEEEEEcCCcc--------CCCCCcEEEeecCChhh---hhcCccceEEEeeCc---------hhhHHHH
Q psy2178 160 LKAFARLPQYRVLWKWENDVM--------EGLGENIRLQKWMPQQD---ILAHPKVKLFIMQGG---------LQSLQEA 219 (357)
Q Consensus 160 ~~al~~~~~~~viw~~~~~~~--------~~~~~nv~~~~~~pq~~---lL~h~~~~~~ithgG---------~~s~~ea 219 (357)
++.+.+.+.+++++.-.+... ....+|+.+.+++++.+ ++ .+++++|.... -+++.||
T Consensus 242 ~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~~di~i~~~~~~~~~~~~~p~~~~Ea 319 (394)
T cd03794 242 AALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELL--AAADVGLVPLKPGPAFEGVSPSKLFEY 319 (394)
T ss_pred HHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHH--HhhCeeEEeccCcccccccCchHHHHH
Confidence 333333334355543322221 12347899999998764 45 45787775432 2347999
Q ss_pred HhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcccc
Q psy2178 220 FHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWM 280 (357)
Q Consensus 220 l~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 280 (357)
+++|+|+|+.+..+.+.. +.+.+.|..++.. +.+++.++|.++++|++.+++..+
T Consensus 320 ~~~G~pvi~~~~~~~~~~----~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~~~~~~~~~ 374 (394)
T cd03794 320 MAAGKPVLASVDGESAEL----VEEAGAGLVVPPG--DPEALAAAILELLDDPEERAEMGE 374 (394)
T ss_pred HHCCCcEEEecCCCchhh----hccCCcceEeCCC--CHHHHHHHHHHHHhChHHHHHHHH
Confidence 999999999987654433 2233567666533 689999999999988765554433
No 84
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.34 E-value=0.0032 Score=60.11 Aligned_cols=179 Identities=12% Similarity=0.134 Sum_probs=102.3
Q ss_pred eeEEEEcCCCccccC--CCCC-CCeEEeCccccCC-----CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHH
Q psy2178 87 DSFMFSFDSRITGYA--RPMQ-RKLVEVGPLHLVD-----PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKA 158 (357)
Q Consensus 87 ~~~~l~~s~~~l~~~--~~~~-p~v~~vG~l~~~~-----~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 158 (357)
++.+++.|...-+.- ...+ .+++.+|....+. ......++.+-+. .++.+++++++-... ..+.+..
T Consensus 142 ad~~~~~s~~~~~~l~~~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~-~~~~~vl~~~hr~~~----~~k~~~~ 216 (365)
T TIGR00236 142 ADLHFAPTEQAKDNLLRENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG-EDKRYILLTLHRREN----VGEPLEN 216 (365)
T ss_pred HHhccCCCHHHHHHHHHcCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcC-CCCCEEEEecCchhh----hhhHHHH
Confidence 466666665543321 1233 3578888654221 0011122222222 134566666543321 1233566
Q ss_pred HHHHHHhC----CCceEEEEEcCCc-c-------CCCCCcEEEeecCChh---hhhcCccceEEEeeCchhhHHHHHhcC
Q psy2178 159 FLKAFARL----PQYRVLWKWENDV-M-------EGLGENIRLQKWMPQQ---DILAHPKVKLFIMQGGLQSLQEAFHYG 223 (357)
Q Consensus 159 i~~al~~~----~~~~viw~~~~~~-~-------~~~~~nv~~~~~~pq~---~lL~h~~~~~~ithgG~~s~~eal~~G 223 (357)
+++++.++ +.+++++...++. . ....+++++.+.+++. .++ ..++++++..|.. +.||+++|
T Consensus 217 ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l--~~ad~vv~~Sg~~-~~EA~a~g 293 (365)
T TIGR00236 217 IFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLA--ANSHLILTDSGGV-QEEAPSLG 293 (365)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHH--HhCCEEEECChhH-HHHHHHcC
Confidence 66666553 3336666543321 1 1234688888877764 344 4588999977644 79999999
Q ss_pred ceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcccc
Q psy2178 224 VKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWM 280 (357)
Q Consensus 224 vP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 280 (357)
+|+|.++..+++.. +.+.|.+..+. -+.+++.+++.+++++++.++++..
T Consensus 294 ~PvI~~~~~~~~~e----~~~~g~~~lv~---~d~~~i~~ai~~ll~~~~~~~~~~~ 343 (365)
T TIGR00236 294 KPVLVLRDTTERPE----TVEAGTNKLVG---TDKENITKAAKRLLTDPDEYKKMSN 343 (365)
T ss_pred CCEEECCCCCCChH----HHhcCceEEeC---CCHHHHHHHHHHHHhChHHHHHhhh
Confidence 99999876555442 33456665542 3688999999999988876655443
No 85
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.31 E-value=0.0054 Score=58.10 Aligned_cols=182 Identities=15% Similarity=0.143 Sum_probs=100.4
Q ss_pred CeeEEEEcCCCccccCC---CCCCCeEEeCccccCC--CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYAR---PMQRKLVEVGPLHLVD--PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFL 160 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~---~~~p~v~~vG~l~~~~--~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~ 160 (357)
.+|.+++.|....+... ....++..+....... ....+....+.....+...+++.+|.....+ ....+++.+.
T Consensus 142 ~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~l~~~K-~~~~li~a~~ 220 (371)
T cd04962 142 KSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGEKVLIHISNFRPVK-RIDDVIRIFA 220 (371)
T ss_pred hCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchHHHHHhcCCCCCCeEEEEeccccccc-CHHHHHHHHH
Confidence 57777777765433221 1223455554332111 1111222222233333455777788876422 2233333332
Q ss_pred HHHHhCCCceEEEEEcCCcc---------CCCCCcEEEeecCChh-hhhcCccceEEEee----CchhhHHHHHhcCceE
Q psy2178 161 KAFARLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQQ-DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKL 226 (357)
Q Consensus 161 ~al~~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~-~lL~h~~~~~~ith----gG~~s~~eal~~GvP~ 226 (357)
....+.+. ++++.-.+... .+..+++.+.++.++. +++ ..++++|.- |...++.||+++|+|+
T Consensus 221 ~l~~~~~~-~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d~~v~ps~~E~~~~~~~EAma~g~Pv 297 (371)
T cd04962 221 KVRKEVPA-RLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELL--SIADLFLLPSEKESFGLAALEAMACGVPV 297 (371)
T ss_pred HHHhcCCc-eEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHH--HhcCEEEeCCCcCCCccHHHHHHHcCCCE
Confidence 22223343 66665443221 1335678888887663 456 347777743 3446999999999999
Q ss_pred EeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhc
Q psy2178 227 ICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKS 277 (357)
Q Consensus 227 i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~ 277 (357)
|+....+ .+..+.+...|...+. -+.+++.+++.++++++..++.
T Consensus 298 I~s~~~~----~~e~i~~~~~G~~~~~--~~~~~l~~~i~~l~~~~~~~~~ 342 (371)
T cd04962 298 VASNAGG----IPEVVKHGETGFLVDV--GDVEAMAEYALSLLEDDELWQE 342 (371)
T ss_pred EEeCCCC----chhhhcCCCceEEcCC--CCHHHHHHHHHHHHhCHHHHHH
Confidence 9975432 3444445456766653 3578999999999988755443
No 86
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.29 E-value=0.0034 Score=61.26 Aligned_cols=140 Identities=14% Similarity=0.213 Sum_probs=81.0
Q ss_pred cCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc-----------CCC-CCcEEEeecCChhhhh
Q psy2178 132 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM-----------EGL-GENIRLQKWMPQQDIL 199 (357)
Q Consensus 132 ~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~-----------~~~-~~nv~~~~~~pq~~lL 199 (357)
-.+..++|.+|..... +.++.++.-.+.|++.|. ..+|..+.... .++ ++++.+.+..|+.+.|
T Consensus 281 Lp~d~vvF~~fn~~~K---I~p~~l~~W~~IL~~vP~-S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl 356 (468)
T PF13844_consen 281 LPEDAVVFGSFNNLFK---ISPETLDLWARILKAVPN-SRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAPREEHL 356 (468)
T ss_dssp --SSSEEEEE-S-GGG-----HHHHHHHHHHHHHSTT-EEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---HHHHH
T ss_pred CCCCceEEEecCcccc---CCHHHHHHHHHHHHhCCC-cEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCCHHHHH
Confidence 3346688888888876 789999999999999999 88887654321 112 5778888888876544
Q ss_pred -cCccceEEEe---eCchhhHHHHHhcCceEEeecCCC-ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcch
Q psy2178 200 -AHPKVKLFIM---QGGLQSLQEAFHYGVKLICIPMFA-DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQV 274 (357)
Q Consensus 200 -~h~~~~~~it---hgG~~s~~eal~~GvP~i~~P~~~-dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 274 (357)
.+..+|+++- .+|.+|++||++.|||+|.+|--. -...-+..+...|+...+-. +.++..+.--++-+|+++
T Consensus 357 ~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~---s~~eYv~~Av~La~D~~~ 433 (468)
T PF13844_consen 357 RRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD---SEEEYVEIAVRLATDPER 433 (468)
T ss_dssp HHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S---SHHHHHHHHHHHHH-HHH
T ss_pred HHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC---CHHHHHHHHHHHhCCHHH
Confidence 3355787764 478899999999999999998422 22333455666787765542 355554444455567665
Q ss_pred hhcc
Q psy2178 275 FKSG 278 (357)
Q Consensus 275 ~~~a 278 (357)
+++.
T Consensus 434 l~~l 437 (468)
T PF13844_consen 434 LRAL 437 (468)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 87
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.26 E-value=0.0014 Score=61.95 Aligned_cols=122 Identities=19% Similarity=0.248 Sum_probs=82.8
Q ss_pred EEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc----CCCCCcEEEeecCChhh---hhcCccceEEEee
Q psy2178 138 IYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM----EGLGENIRLQKWMPQQD---ILAHPKVKLFIMQ 210 (357)
Q Consensus 138 v~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~----~~~~~nv~~~~~~pq~~---lL~h~~~~~~ith 210 (357)
.++..|.... .+-.+.+++++++++. ++++.-++... ....+|+.+.+++|+.+ +++ ++++++.-
T Consensus 197 ~il~~G~~~~-----~K~~~~li~a~~~~~~-~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~--~ad~~v~p 268 (351)
T cd03804 197 YYLSVGRLVP-----YKRIDLAIEAFNKLGK-RLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYA--RARAFLFP 268 (351)
T ss_pred EEEEEEcCcc-----ccChHHHHHHHHHCCC-cEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHH--hCCEEEEC
Confidence 4556677754 3346677888888885 87765544321 13568999999999854 563 47777642
Q ss_pred --Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcc
Q psy2178 211 --GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQ 273 (357)
Q Consensus 211 --gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~ 273 (357)
-|. .++.||+++|+|+|+....+ ....+.+...|..++.. +.+++.++|.+++++++
T Consensus 269 s~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~~--~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 269 AEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEEQ--TVESLAAAVERFEKNED 328 (351)
T ss_pred CcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 333 46789999999999986533 22334444567777533 67889999999998873
No 88
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=97.26 E-value=0.00052 Score=67.83 Aligned_cols=64 Identities=19% Similarity=0.468 Sum_probs=48.7
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCc-----CCCC---------CCCeEeecCCChhhh
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-----MEGL---------GENIRLQKWMPQQDI 354 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~-----~~~~---------~~n~~~~~w~pQ~~~ 354 (357)
.+..++|+||||.. .++....+++++++.+.+ ++|||.+.... ...+ ++|+.+..|+||.++
T Consensus 281 ~~~svVyvsfGS~~---~~~~~~~~ela~gL~~~~-~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~v 356 (477)
T PLN02863 281 EDHKVVYVCFGSQV---VLTKEQMEALASGLEKSG-VHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAI 356 (477)
T ss_pred CCCceEEEEeecee---cCCHHHHHHHHHHHHhCC-CcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHH
Confidence 34689999999965 344555779999999999 59999996321 1122 457888999999999
Q ss_pred hC
Q psy2178 355 LG 356 (357)
Q Consensus 355 l~ 356 (357)
|+
T Consensus 357 L~ 358 (477)
T PLN02863 357 LS 358 (477)
T ss_pred hc
Confidence 96
No 89
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.20 E-value=0.0053 Score=57.30 Aligned_cols=130 Identities=20% Similarity=0.268 Sum_probs=79.1
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhC----CCceEEEEEcCCc-----------cCCCCCcEEEeecCChhh--
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL----PQYRVLWKWENDV-----------MEGLGENIRLQKWMPQQD-- 197 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~----~~~~viw~~~~~~-----------~~~~~~nv~~~~~~pq~~-- 197 (357)
+..+++..|+....+ -...+++++.++ +.+++++.-.+.. .....+++.+.+++++.+
T Consensus 202 ~~~~i~~~G~~~~~K-----~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 276 (375)
T cd03821 202 DKRIILFLGRLHPKK-----GLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKA 276 (375)
T ss_pred CCcEEEEEeCcchhc-----CHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHH
Confidence 445777788876422 223334443332 3435544322211 113467899999999654
Q ss_pred -hhcCccceEEEeeC----chhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 198 -ILAHPKVKLFIMQG----GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 198 -lL~h~~~~~~ithg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
++ .+++++|... -.+++.||+++|+|+|+-+..+ ....+.+ +.|..... +.+++.++|.++++++
T Consensus 277 ~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~-~~~~~~~~---~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 277 AAL--ADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY-GCGWVVDD---DVDALAAALRRALELP 346 (375)
T ss_pred HHH--hhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc-CceEEeCC---ChHHHHHHHHHHHhCH
Confidence 45 3477776542 2468999999999999976433 2333444 66766542 3489999999999887
Q ss_pred chhhccc
Q psy2178 273 QVFKSGW 279 (357)
Q Consensus 273 ~~~~~a~ 279 (357)
+.+++..
T Consensus 347 ~~~~~~~ 353 (375)
T cd03821 347 QRLKAMG 353 (375)
T ss_pred HHHHHHH
Confidence 5444333
No 90
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.20 E-value=0.0057 Score=56.62 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=80.5
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHh-CCCceEEEEEcCCcc--------C--CCCCcEEEeecCChh-hhhcCc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFAR-LPQYRVLWKWENDVM--------E--GLGENIRLQKWMPQQ-DILAHP 202 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~-~~~~~viw~~~~~~~--------~--~~~~nv~~~~~~pq~-~lL~h~ 202 (357)
++.+++..|+....+ ..+.+-+.++.+.+ .+.+++++.-++... . ....++...++..+. +++ .
T Consensus 187 ~~~~i~~~G~~~~~k--~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~ 262 (359)
T cd03808 187 DDPVFLFVARLLKDK--GIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELL--A 262 (359)
T ss_pred CCcEEEEEecccccc--CHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHH--H
Confidence 456888888876422 22222223333332 234355554333211 0 124678888875443 456 3
Q ss_pred cceEEEeeCc----hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhc
Q psy2178 203 KVKLFIMQGG----LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKS 277 (357)
Q Consensus 203 ~~~~~ithgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~ 277 (357)
+++++|.... .+++.||+++|+|+|+-+..+ ....+.+.+.|..++. -+.+++.+++.+++.+++..+.
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~~--~~~~~~~~~i~~l~~~~~~~~~ 335 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVPP--GDAEALADAIERLIEDPELRAR 335 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEECC--CCHHHHHHHHHHHHhCHHHHHH
Confidence 5788876543 578999999999999975543 2344455566776653 3588999999999988765443
No 91
>PLN02210 UDP-glucosyl transferase
Probab=97.17 E-value=0.00098 Score=65.60 Aligned_cols=68 Identities=24% Similarity=0.460 Sum_probs=49.7
Q ss_pred hccC-CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCc----CC---C-C-CCCeEeecCCChhhh
Q psy2178 285 WMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV----ME---G-L-GENIRLQKWMPQQDI 354 (357)
Q Consensus 285 ~~~~-~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~----~~---~-~-~~n~~~~~w~pQ~~~ 354 (357)
+.++ .+..++|+||||... .+....++++++|+..+ ++|||.+..+. +. . . +.|.++++|+||.++
T Consensus 262 wld~~~~~svvyvsfGS~~~---~~~~~~~e~a~~l~~~~-~~flw~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~i 337 (456)
T PLN02210 262 WLDKQARSSVVYISFGSMLE---SLENQVETIAKALKNRG-VPFLWVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKI 337 (456)
T ss_pred HHhCCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCC-CCEEEEEeCCccccchhhHHhhccCCCeEEEecCCHHHH
Confidence 3444 456899999999654 34556679999999999 59999886421 11 1 1 366678999999999
Q ss_pred hC
Q psy2178 355 LG 356 (357)
Q Consensus 355 l~ 356 (357)
|+
T Consensus 338 L~ 339 (456)
T PLN02210 338 LS 339 (456)
T ss_pred hc
Confidence 96
No 92
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.10 E-value=0.00091 Score=63.46 Aligned_cols=180 Identities=16% Similarity=0.204 Sum_probs=97.5
Q ss_pred eeEEEEcCCCccccCC--C-CCCCeEEeCccccCC----CCCCchHH--HHHhccCCCceEEEecCCccccC-CCcHHHH
Q psy2178 87 DSFMFSFDSRITGYAR--P-MQRKLVEVGPLHLVD----PKPLDESL--QKWMDGAPEGVIYFSLGTNMKGT-SMGDFRR 156 (357)
Q Consensus 87 ~~~~l~~s~~~l~~~~--~-~~p~v~~vG~l~~~~----~~~l~~~~--~~~l~~~~~~vv~vs~GS~~~~~-~~~~~~~ 156 (357)
+++.|+.+...-+.-. . -+.+++.||....+. .....++. ..++...+++.+++++=...... .-....+
T Consensus 123 a~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i 202 (346)
T PF02350_consen 123 AHLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQI 202 (346)
T ss_dssp -SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHH
T ss_pred hhhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHH
Confidence 5678887776544221 1 245799999876543 11122222 23333456889999984444311 0113445
Q ss_pred HHHHHHHHhCCCceEEEEEcCCc---------cCCCCCcEEEeecCChh---hhhcCccceEEEeeCchhhHH-HHHhcC
Q psy2178 157 KAFLKAFARLPQYRVLWKWENDV---------MEGLGENIRLQKWMPQQ---DILAHPKVKLFIMQGGLQSLQ-EAFHYG 223 (357)
Q Consensus 157 ~~i~~al~~~~~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~---~lL~h~~~~~~ithgG~~s~~-eal~~G 223 (357)
..+++++.+...+++||.....+ +... +|+.+.+-+++. .+|. +++++|+..| ++. ||.+.|
T Consensus 203 ~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~--~a~~vvgdSs--GI~eEa~~lg 277 (346)
T PF02350_consen 203 LEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLK--NADLVVGDSS--GIQEEAPSLG 277 (346)
T ss_dssp HHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHH--HESEEEESSH--HHHHHGGGGT
T ss_pred HHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHh--cceEEEEcCc--cHHHHHHHhC
Confidence 55666666664458999987422 2344 599998877764 5664 5999999998 555 999999
Q ss_pred ceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcc
Q psy2178 224 VKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSG 278 (357)
Q Consensus 224 vP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a 278 (357)
+|+|.+=..++.+. ....|..+.+ ..+.++|.+++++++.+....+++
T Consensus 278 ~P~v~iR~~geRqe----~r~~~~nvlv---~~~~~~I~~ai~~~l~~~~~~~~~ 325 (346)
T PF02350_consen 278 KPVVNIRDSGERQE----GRERGSNVLV---GTDPEAIIQAIEKALSDKDFYRKL 325 (346)
T ss_dssp --EEECSSS-S-HH----HHHTTSEEEE---TSSHHHHHHHHHHHHH-HHHHHHH
T ss_pred CeEEEecCCCCCHH----HHhhcceEEe---CCCHHHHHHHHHHHHhChHHHHhh
Confidence 99999833233222 2234444443 367999999999999774444433
No 93
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.08 E-value=0.0093 Score=54.94 Aligned_cols=177 Identities=16% Similarity=0.213 Sum_probs=96.8
Q ss_pred CeeEEEEcCCCccccCCC---C-CCCeEEeCccccCC-CCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARP---M-QRKLVEVGPLHLVD-PKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFL 160 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~---~-~p~v~~vG~l~~~~-~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~ 160 (357)
.++.+++.|....+.-.. . ..++..+..-.... .......... ....+++.+++..|+.... +-...++
T Consensus 135 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~g~~~~~-----k~~~~~i 208 (353)
T cd03811 135 RADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPLE-LGIPPDGPVILAVGRLSPQ-----KGFDTLI 208 (353)
T ss_pred ccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhhh-cCCCCCceEEEEEecchhh-----cChHHHH
Confidence 678888888876554322 1 23455554333211 1111111000 1112345677888887642 2233444
Q ss_pred HHHHhCC----CceEEEEEcCCcc---------CCCCCcEEEeecCChh-hhhcCccceEEEee----CchhhHHHHHhc
Q psy2178 161 KAFARLP----QYRVLWKWENDVM---------EGLGENIRLQKWMPQQ-DILAHPKVKLFIMQ----GGLQSLQEAFHY 222 (357)
Q Consensus 161 ~al~~~~----~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~-~lL~h~~~~~~ith----gG~~s~~eal~~ 222 (357)
++++.+. .+++++.-.+... ....+++.+.++.+.. +++. .++++|.- |..+++.||+++
T Consensus 209 ~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~--~~d~~i~ps~~e~~~~~~~Ea~~~ 286 (353)
T cd03811 209 RAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLK--AADLFVLSSRYEGFPNVLLEAMAL 286 (353)
T ss_pred HHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHH--hCCEEEeCcccCCCCcHHHHHHHh
Confidence 4444432 3355544322211 1346788888887764 4563 47777743 335689999999
Q ss_pred CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHH---HHHHHHHhcCcchhh
Q psy2178 223 GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEII---FNALKLVLEDPQVFK 276 (357)
Q Consensus 223 GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l---~~~i~~~l~~~~~~~ 276 (357)
|+|+|+-... .....+.+.+.|...+.. +.+.+ .+++..+..+++.++
T Consensus 287 G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~ 337 (353)
T cd03811 287 GTPVVATDCP----GPREILEDGENGLLVPVG--DEAALAAAALALLDLLLDPELRE 337 (353)
T ss_pred CCCEEEcCCC----ChHHHhcCCCceEEECCC--CHHHHHHHHHHHHhccCChHHHH
Confidence 9999986543 344556666778877633 46666 555555555554433
No 94
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.07 E-value=0.0067 Score=56.82 Aligned_cols=131 Identities=21% Similarity=0.250 Sum_probs=78.9
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhC-CCceEEEEEcCCcc---------CCCCCcEEEeecCChhh---hhcC
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL-PQYRVLWKWENDVM---------EGLGENIRLQKWMPQQD---ILAH 201 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~-~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~~---lL~h 201 (357)
.+++++.+|+....+ ..+.+-..++.+.+. +.+++++.-.+... ...++++.+.+++|+.+ +++
T Consensus 178 ~~~~i~~~g~~~~~k--~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~- 254 (355)
T cd03799 178 EPLRILSVGRLVEKK--GLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLR- 254 (355)
T ss_pred CCeEEEEEeeecccc--CHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHH-
Confidence 456677778765421 122222222333322 23355554333221 13468899999998654 453
Q ss_pred ccceEEEe----------eCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 202 PKVKLFIM----------QGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 202 ~~~~~~it----------hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
++++++. -|.-++++||+++|+|+|+.+..+ ....+.+...|...+. -+.+++.++|.+++++
T Consensus 255 -~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~~~--~~~~~l~~~i~~~~~~ 327 (355)
T cd03799 255 -AADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLVPP--GDPEALADAIERLLDD 327 (355)
T ss_pred -hCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEeCC--CCHHHHHHHHHHHHhC
Confidence 4677776 234578999999999999876532 1123333446776653 2689999999999988
Q ss_pred cchh
Q psy2178 272 PQVF 275 (357)
Q Consensus 272 ~~~~ 275 (357)
+...
T Consensus 328 ~~~~ 331 (355)
T cd03799 328 PELR 331 (355)
T ss_pred HHHH
Confidence 7543
No 95
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.04 E-value=0.0081 Score=58.35 Aligned_cols=129 Identities=14% Similarity=0.191 Sum_probs=80.7
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhC----CCceEEEEEcCCc---c------CCCCCcEEEeecCChhh---h
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL----PQYRVLWKWENDV---M------EGLGENIRLQKWMPQQD---I 198 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~----~~~~viw~~~~~~---~------~~~~~nv~~~~~~pq~~---l 198 (357)
.++.+++.|..... +-+..++++++.+ +.+++++.-.+.. + .++.+++.+.+|+|+.+ +
T Consensus 221 ~~~~il~vGrl~~~-----Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~ 295 (406)
T PRK15427 221 TPLEIISVARLTEK-----KGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAM 295 (406)
T ss_pred CCeEEEEEeCcchh-----cCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHH
Confidence 45566777887642 2233344444332 2334444333321 1 13467899999999865 4
Q ss_pred hcCccceEEEee---------Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHH
Q psy2178 199 LAHPKVKLFIMQ---------GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLV 268 (357)
Q Consensus 199 L~h~~~~~~ith---------gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~ 268 (357)
+ ..+++||.- -|. .+++||+++|+|+|+-...+ ....+.+-..|..++.. +.+++.++|.++
T Consensus 296 l--~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~lv~~~--d~~~la~ai~~l 367 (406)
T PRK15427 296 L--DDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGWLVPEN--DAQALAQRLAAF 367 (406)
T ss_pred H--HhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEEeCCC--CHHHHHHHHHHH
Confidence 5 457888753 244 57899999999999975433 22334444567776533 688999999999
Q ss_pred hc-Ccchhh
Q psy2178 269 LE-DPQVFK 276 (357)
Q Consensus 269 l~-~~~~~~ 276 (357)
++ |++.++
T Consensus 368 ~~~d~~~~~ 376 (406)
T PRK15427 368 SQLDTDELA 376 (406)
T ss_pred HhCCHHHHH
Confidence 98 876443
No 96
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.01 E-value=0.0068 Score=57.65 Aligned_cols=132 Identities=19% Similarity=0.187 Sum_probs=80.6
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---------cCCCCCcEEEeecCChh-hhhcCccce
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---------MEGLGENIRLQKWMPQQ-DILAHPKVK 205 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---------~~~~~~nv~~~~~~pq~-~lL~h~~~~ 205 (357)
+..++..|.....+ -...+++.+.+...+.+.+++++.-.+.. ...+.+++.+.++.++. .++.. ++
T Consensus 204 ~~~i~~vgrl~~~K-~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--ad 280 (372)
T cd04949 204 PHKIITVARLAPEK-QLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQK--AQ 280 (372)
T ss_pred CCeEEEEEccCccc-CHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhh--hh
Confidence 34566777765422 23344444444444456556665433322 11346778888876664 45644 66
Q ss_pred EEEe--e--CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 206 LFIM--Q--GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 206 ~~it--h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
++|. + |...+++||+++|+|+|+...... ....+.+...|..++. -+.+++.++|.+++++++..
T Consensus 281 ~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g---~~~~v~~~~~G~lv~~--~d~~~la~~i~~ll~~~~~~ 349 (372)
T cd04949 281 LSLLTSQSEGFGLSLMEALSHGLPVISYDVNYG---PSEIIEDGENGYLVPK--GDIEALAEAIIELLNDPKLL 349 (372)
T ss_pred EEEecccccccChHHHHHHhCCCCEEEecCCCC---cHHHcccCCCceEeCC--CcHHHHHHHHHHHHcCHHHH
Confidence 5554 3 334689999999999998754311 2334445566777753 36889999999999987433
No 97
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=96.94 E-value=0.018 Score=55.60 Aligned_cols=135 Identities=16% Similarity=0.129 Sum_probs=81.7
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCC--ceEEEEEcC---C--c---c------CCCCCcEEEeecCChh--
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQ--YRVLWKWEN---D--V---M------EGLGENIRLQKWMPQQ-- 196 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~--~~viw~~~~---~--~---~------~~~~~nv~~~~~~pq~-- 196 (357)
+..+++..|.....+ -...+++.+....++.+. +++++.-+. . . + .++.+++.+.+++++.
T Consensus 218 ~~~~i~~~G~l~~~K-~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 296 (405)
T TIGR03449 218 DTKVVAFVGRIQPLK-APDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEEL 296 (405)
T ss_pred CCcEEEEecCCCccc-CHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHH
Confidence 345777888886422 223333333333333332 344444321 1 1 1 1345789999999875
Q ss_pred -hhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 197 -DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 197 -~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
+++ ..+++++.- |...+++||+++|+|+|+....+ ....+.+...|..++. -+.+++.++|.+++++
T Consensus 297 ~~~l--~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~--~d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 297 VHVY--RAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVDG--HDPADWADALARLLDD 368 (405)
T ss_pred HHHH--HhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECCC--CCHHHHHHHHHHHHhC
Confidence 456 457877742 33358999999999999976543 2233444556776653 3678999999999988
Q ss_pred cchhhcc
Q psy2178 272 PQVFKSG 278 (357)
Q Consensus 272 ~~~~~~a 278 (357)
++.++.+
T Consensus 369 ~~~~~~~ 375 (405)
T TIGR03449 369 PRTRIRM 375 (405)
T ss_pred HHHHHHH
Confidence 7654433
No 98
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.94 E-value=0.0048 Score=57.75 Aligned_cols=89 Identities=19% Similarity=0.336 Sum_probs=58.9
Q ss_pred CCCcEEEeecCChhh---hhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccC
Q psy2178 183 LGENIRLQKWMPQQD---ILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYED 255 (357)
Q Consensus 183 ~~~nv~~~~~~pq~~---lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~ 255 (357)
..+++.+.+++|+.+ +++ .+++++.. |..+++.||+++|+|+|+-...+- ...+.+ .|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~--~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~----~e~~~~--~~~~~~~-- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYR--GARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSL----PEVAGD--AALYFDP-- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHh--hhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCc----cceecC--ceeeeCC--
Confidence 578899999998864 453 46666543 334689999999999998654221 111112 2444432
Q ss_pred CCHHHHHHHHHHHhcCcchhhccccc
Q psy2178 256 LNEEIIFNALKLVLEDPQVFKSGWMS 281 (357)
Q Consensus 256 ~~~~~l~~~i~~~l~~~~~~~~a~~l 281 (357)
-+.+++.+++.++++|++.+..+.+-
T Consensus 321 ~~~~~~~~~i~~l~~~~~~~~~~~~~ 346 (365)
T cd03809 321 LDPEALAAAIERLLEDPALREELRER 346 (365)
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 26889999999999988766554443
No 99
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.90 E-value=0.00093 Score=63.22 Aligned_cols=166 Identities=17% Similarity=0.110 Sum_probs=94.8
Q ss_pred CCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCC--ceEEEEEcCCc--c
Q psy2178 105 QRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQ--YRVLWKWENDV--M 180 (357)
Q Consensus 105 ~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~--~~viw~~~~~~--~ 180 (357)
..++.+||--..+. ++..-.. ++ ++++|.+--||.... -...+-.++++..++.. ..+++....+. +
T Consensus 143 g~~~~~VGhPl~d~---~~~~~~~-~~--~~~~I~llPGSR~~E---i~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i 213 (347)
T PRK14089 143 QSKATYVGHPLLDE---IKEFKKD-LD--KEGTIAFMPGSRKSE---IKRLMPIFKELAKKLEGKEKILVVPSFFKGKDL 213 (347)
T ss_pred CCCCEEECCcHHHh---hhhhhhh-cC--CCCEEEEECCCCHHH---HHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHH
Confidence 45688999544332 1111011 22 347899999998641 12444444555554432 13443322211 1
Q ss_pred CC-C--CCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEee-cCCCChHHHHHHHH---Hhceeeee--
Q psy2178 181 EG-L--GENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICI-PMFADQDLNCQRVG---KIKTGIVL-- 251 (357)
Q Consensus 181 ~~-~--~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~v~---~~G~g~~l-- 251 (357)
.. . ...+.+.+ .-.++++ .+++.|+-.|..|+ |+...|+|+++. ....-|+.||++++ ..|++-.+
T Consensus 214 ~~~~~~~~~~~~~~--~~~~~m~--~aDlal~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~ 288 (347)
T PRK14089 214 KEIYGDISEFEISY--DTHKALL--EAEFAFICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFD 288 (347)
T ss_pred HHHHhcCCCcEEec--cHHHHHH--hhhHHHhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcC
Confidence 11 1 11223332 2346674 59999999999999 999999999984 34557888999998 45655444
Q ss_pred -----------eccCCCHHHHHHHHHHHhcCcchhhccccchhhh
Q psy2178 252 -----------EYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKW 285 (357)
Q Consensus 252 -----------~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~ 285 (357)
-.++.+++.+.+++.+ ....++++...++.+.+
T Consensus 289 ~~~~~~vvPEllQ~~~t~~~la~~i~~-~~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 289 FLGKEPLHPELLQEFVTVENLLKAYKE-MDREKFFKKSKELREYL 332 (347)
T ss_pred CCcccccCchhhcccCCHHHHHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 2246788888888877 22233444444444433
No 100
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=96.88 E-value=0.009 Score=56.06 Aligned_cols=133 Identities=14% Similarity=0.178 Sum_probs=78.5
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc---------CCCCCcEEEeecCCh-hhhhcCcc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQ-QDILAHPK 203 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq-~~lL~h~~ 203 (357)
++..+++..|+....+ -...+++.+.+...+.+.+++++.-++... .+..+++.+.++..+ .+++ ..
T Consensus 186 ~~~~~~l~~g~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 262 (360)
T cd04951 186 NDTFVILAVGRLVEAK-DYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYY--NA 262 (360)
T ss_pred CCCEEEEEEeeCchhc-CcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHH--Hh
Confidence 3456778888875422 223333333333333344477765443321 134578888887655 3566 34
Q ss_pred ceEEEeeC----chhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc-Ccchhhc
Q psy2178 204 VKLFIMQG----GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE-DPQVFKS 277 (357)
Q Consensus 204 ~~~~ithg----G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~-~~~~~~~ 277 (357)
+++++.-. ..+++.||+++|+|+|+-.. ......+.+. |..+.. -+.+++.+++.++++ ++.+++.
T Consensus 263 ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~--g~~~~~--~~~~~~~~~i~~ll~~~~~~~~~ 333 (360)
T cd04951 263 ADLFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGDS--GLIVPI--SDPEALANKIDEILKMSGEERDI 333 (360)
T ss_pred hceEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecCC--ceEeCC--CCHHHHHHHHHHHHhCCHHHHHH
Confidence 77776643 25689999999999998543 2333444443 444432 368899999999984 4455443
No 101
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.87 E-value=0.017 Score=53.61 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=77.2
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc----------CCCCCcEEEeecCChh-hhhcCc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM----------EGLGENIRLQKWMPQQ-DILAHP 202 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~----------~~~~~nv~~~~~~pq~-~lL~h~ 202 (357)
++..+++..|+....+ -...+++.+.....+.+.+++++.-.+... ..+.+++.+.+...+. .++ .
T Consensus 191 ~~~~~i~~~G~~~~~K-~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~ 267 (365)
T cd03807 191 EDTFLIGIVARLHPQK-DHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALL--N 267 (365)
T ss_pred CCCeEEEEecccchhc-CHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHH--H
Confidence 3456777888876422 122333333322233344466655333211 1234567776654443 456 4
Q ss_pred cceEEEeeCc----hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 203 KVKLFIMQGG----LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 203 ~~~~~ithgG----~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
.+++++.... .+++.||+++|+|+|+-...+ +...+.+ .|..++.. +.+++.+++.+++++++.+
T Consensus 268 ~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~----~~e~~~~--~g~~~~~~--~~~~l~~~i~~l~~~~~~~ 336 (365)
T cd03807 268 ALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGD----NAELVGD--TGFLVPPG--DPEALAEAIEALLADPALR 336 (365)
T ss_pred hCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCC----hHHHhhc--CCEEeCCC--CHHHHHHHHHHHHhChHHH
Confidence 5888886544 479999999999999865433 3333444 45555433 5889999999999886433
No 102
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.80 E-value=0.029 Score=52.65 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=83.3
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc---------CCCCCcEEEeecCCh-hhhhcCcc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQ-QDILAHPK 203 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq-~~lL~h~~ 203 (357)
+...+++..|+....+ -...+++.+.....+.+.+++++.-++... .+..+++...++..+ .+++ ..
T Consensus 190 ~~~~~i~~vGr~~~~K-g~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ 266 (358)
T cd03812 190 EDKFVIGHVGRFSEQK-NHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELL--QA 266 (358)
T ss_pred CCCEEEEEEecccccc-ChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHH--Hh
Confidence 3456777888876422 112223322222223344355554333221 234678888888555 3566 45
Q ss_pred ceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccc
Q psy2178 204 VKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGW 279 (357)
Q Consensus 204 ~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 279 (357)
++++|.- |-..+++||+++|+|+|+-...+. ...+.+ +.|.... +-+.+++.++|.++++|++.+++..
T Consensus 267 adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~----~~~i~~-~~~~~~~--~~~~~~~a~~i~~l~~~~~~~~~~~ 339 (358)
T cd03812 267 MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITK----EVDLTD-LVKFLSL--DESPEIWAEEILKLKSEDRRERSSE 339 (358)
T ss_pred cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCch----hhhhcc-CccEEeC--CCCHHHHHHHHHHHHhCcchhhhhh
Confidence 7777754 445789999999999998755432 223334 4455443 2257999999999999988776554
Q ss_pred cch
Q psy2178 280 MSL 282 (357)
Q Consensus 280 ~l~ 282 (357)
..+
T Consensus 340 ~~~ 342 (358)
T cd03812 340 SIK 342 (358)
T ss_pred hhh
Confidence 443
No 103
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=96.66 E-value=0.016 Score=56.35 Aligned_cols=77 Identities=16% Similarity=0.295 Sum_probs=54.2
Q ss_pred CcEEEe-ecCChhh---hhcCccceEEEe-e------CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeec
Q psy2178 185 ENIRLQ-KWMPQQD---ILAHPKVKLFIM-Q------GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEY 253 (357)
Q Consensus 185 ~nv~~~-~~~pq~~---lL~h~~~~~~it-h------gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~ 253 (357)
+++... +|+|..+ +| ..++++++ + |--+.++||+++|+|+|+.... .....+++.+.|..++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l--~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv~- 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLL--ASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVFG- 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHH--HhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEEC-
Confidence 355544 6888654 45 45788774 1 1234799999999999986532 2445555666787763
Q ss_pred cCCCHHHHHHHHHHHhcC
Q psy2178 254 EDLNEEIIFNALKLVLED 271 (357)
Q Consensus 254 ~~~~~~~l~~~i~~~l~~ 271 (357)
+.+++.++|.++++|
T Consensus 367 ---d~~~la~~i~~ll~~ 381 (415)
T cd03816 367 ---DSEELAEQLIDLLSN 381 (415)
T ss_pred ---CHHHHHHHHHHHHhc
Confidence 689999999999988
No 104
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.66 E-value=0.034 Score=53.17 Aligned_cols=132 Identities=15% Similarity=0.101 Sum_probs=80.9
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhC---CCceEEEEEcCCc-----------c-------CCCCCcEEEeecC
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL---PQYRVLWKWENDV-----------M-------EGLGENIRLQKWM 193 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~---~~~~viw~~~~~~-----------~-------~~~~~nv~~~~~~ 193 (357)
...+++..|.....+ -...+++.+.+...+. +.+++++.-++.. + ..+.+++.+.+++
T Consensus 210 ~~~~i~~~grl~~~K-g~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~ 288 (392)
T cd03805 210 GKKTFLSINRFERKK-NIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSI 288 (392)
T ss_pred CceEEEEEeeecccC-ChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 456777888876532 2233344333333332 3435555433221 0 2345789999999
Q ss_pred Chhh---hhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHH
Q psy2178 194 PQQD---ILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALK 266 (357)
Q Consensus 194 pq~~---lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~ 266 (357)
|+.+ ++ ..+++++.. |-..+++||+++|+|+|+.-..+ ....+.+.+.|.... . +.+++.++|.
T Consensus 289 ~~~~~~~~l--~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~~--~-~~~~~a~~i~ 359 (392)
T cd03805 289 SDSQKELLL--SSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLCE--P-TPEEFAEAML 359 (392)
T ss_pred ChHHHHHHH--hhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEeC--C-CHHHHHHHHH
Confidence 9864 45 457777743 22357899999999999975433 223344445576654 2 6889999999
Q ss_pred HHhcCcchhh
Q psy2178 267 LVLEDPQVFK 276 (357)
Q Consensus 267 ~~l~~~~~~~ 276 (357)
+++++++.++
T Consensus 360 ~l~~~~~~~~ 369 (392)
T cd03805 360 KLANDPDLAD 369 (392)
T ss_pred HHHhChHHHH
Confidence 9998875443
No 105
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.65 E-value=0.082 Score=50.52 Aligned_cols=192 Identities=15% Similarity=0.174 Sum_probs=116.9
Q ss_pred HHHhcCCCCeeEEEEcCCCccccCCCC-CCCeEEeCccccCC-C-CCCchH---HHHHhccCCCceEEEecCCccccCCC
Q psy2178 78 REIYFDSAKDSFMFSFDSRITGYARPM-QRKLVEVGPLHLVD-P-KPLDES---LQKWMDGAPEGVIYFSLGTNMKGTSM 151 (357)
Q Consensus 78 ~~l~~~~~~~~~~l~~s~~~l~~~~~~-~p~v~~vG~l~~~~-~-~~l~~~---~~~~l~~~~~~vv~vs~GS~~~~~~~ 151 (357)
..+.+ +.++++..|..+-+.-+.+ .++|..+|-+-.+. + ..++.+ +...++.. ++ +.|..+|...
T Consensus 172 ~~~~~---~i~li~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~-r~-v~iaaSTH~G---- 242 (419)
T COG1519 172 RLLFK---NIDLILAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGH-RP-VWVAASTHEG---- 242 (419)
T ss_pred HHHHH---hcceeeecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCC-Cc-eEEEecCCCc----
Confidence 34556 6788888877765543333 22388888775543 1 122222 33333332 55 6666677543
Q ss_pred cHHHHHHHHHHHH-hCCCceEEEEEcCCc-----------------------cCCCCCcEEEeecCChhhhhcCccceE-
Q psy2178 152 GDFRRKAFLKAFA-RLPQYRVLWKWENDV-----------------------MEGLGENIRLQKWMPQQDILAHPKVKL- 206 (357)
Q Consensus 152 ~~~~~~~i~~al~-~~~~~~viw~~~~~~-----------------------~~~~~~nv~~~~~~pq~~lL~h~~~~~- 206 (357)
.++..-....++. +.+....||+=+-.+ ......++.+.+-+=-..++- .-+++
T Consensus 243 Eeei~l~~~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y-~~adiA 321 (419)
T COG1519 243 EEEIILDAHQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLY-GIADIA 321 (419)
T ss_pred hHHHHHHHHHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHH-hhccEE
Confidence 3444444444444 334435666532211 011233677776554433222 22333
Q ss_pred -----EEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhccccc
Q psy2178 207 -----FIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMS 281 (357)
Q Consensus 207 -----~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 281 (357)
|+-+||+| .+|++++|+|+|.=|....|.+-++++.+.|.|+.++ +.+.+.+++..++.|+..+++..+-
T Consensus 322 FVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~----~~~~l~~~v~~l~~~~~~r~~~~~~ 396 (419)
T COG1519 322 FVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE----DADLLAKAVELLLADEDKREAYGRA 396 (419)
T ss_pred EECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC----CHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34477775 6899999999999999999999999999999999987 3788888888888877666555443
Q ss_pred hhh
Q psy2178 282 LQK 284 (357)
Q Consensus 282 ~~~ 284 (357)
+..
T Consensus 397 ~~~ 399 (419)
T COG1519 397 GLE 399 (419)
T ss_pred HHH
Confidence 333
No 106
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.54 E-value=0.034 Score=52.96 Aligned_cols=134 Identities=19% Similarity=0.214 Sum_probs=81.2
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCC----CceEEEEEcCCcc---------CCCCCcEEEeecCCh-hhhh
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP----QYRVLWKWENDVM---------EGLGENIRLQKWMPQ-QDIL 199 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~----~~~viw~~~~~~~---------~~~~~nv~~~~~~pq-~~lL 199 (357)
+.+.++++.|.....+ -...+++++.+.+.+.+ .+++++.-.+... ..+.+++.+.+...+ ..++
T Consensus 192 ~~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 270 (374)
T TIGR03088 192 DESVVVGTVGRLQAVK-DQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALM 270 (374)
T ss_pred CCCeEEEEEecCCccc-CHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHH
Confidence 3456888888876532 23444455444444433 2355554333211 123456666665443 3566
Q ss_pred cCccceEEEe--e--CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 200 AHPKVKLFIM--Q--GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 200 ~h~~~~~~it--h--gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
..++++|. + |--.+++||+++|+|+|+-...+ +...+.+...|..++. -+.+++.+++.+++++++.+
T Consensus 271 --~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~~--~d~~~la~~i~~l~~~~~~~ 342 (374)
T TIGR03088 271 --QALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVPP--GDAVALARALQPYVSDPAAR 342 (374)
T ss_pred --HhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeCC--CCHHHHHHHHHHHHhCHHHH
Confidence 44787774 2 44579999999999999976543 3344444456776653 36789999999999887544
Q ss_pred h
Q psy2178 276 K 276 (357)
Q Consensus 276 ~ 276 (357)
+
T Consensus 343 ~ 343 (374)
T TIGR03088 343 R 343 (374)
T ss_pred H
Confidence 3
No 107
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=96.50 E-value=0.078 Score=49.75 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=59.5
Q ss_pred CCCcEEEeecCC-hh---hhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeecc
Q psy2178 183 LGENIRLQKWMP-QQ---DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYE 254 (357)
Q Consensus 183 ~~~nv~~~~~~p-q~---~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~ 254 (357)
...++...++++ +. .++ ..+++++.. |...++.||+++|+|+|+....+- ...+.+.+.|..++
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~--~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~----~e~~~~~~~g~~~~-- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIY--SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGI----PDIVDHGVTGYLAK-- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHH--HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCC----hhheeCCCceEEeC--
Confidence 467888999998 43 346 458888875 335799999999999998754321 12233334566654
Q ss_pred CCCHHHHHHHHHHHhcCcchh
Q psy2178 255 DLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 255 ~~~~~~l~~~i~~~l~~~~~~ 275 (357)
..+.+++.+++.+++++++..
T Consensus 314 ~~~~~~~~~~l~~l~~~~~~~ 334 (365)
T cd03825 314 PGDPEDLAEGIEWLLADPDER 334 (365)
T ss_pred CCCHHHHHHHHHHHHhCHHHH
Confidence 336889999999999887644
No 108
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.42 E-value=0.028 Score=53.47 Aligned_cols=129 Identities=16% Similarity=0.220 Sum_probs=80.0
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCC-CceEEEEEcCCc---c------CCCCCcEEEeecCCh--hh---hhc
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP-QYRVLWKWENDV---M------EGLGENIRLQKWMPQ--QD---ILA 200 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~-~~~viw~~~~~~---~------~~~~~nv~~~~~~pq--~~---lL~ 200 (357)
+.+++..|..... ..+-+..+++++..+. .++++..-.+.. + .++++++...++.++ .. .+
T Consensus 180 ~~~i~~~Grl~~~---~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~- 255 (359)
T PRK09922 180 PAVFLYVGRLKFE---GQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKI- 255 (359)
T ss_pred CcEEEEEEEEecc---cCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHH-
Confidence 4567777876421 1223455666666553 335554433322 1 135688999998754 22 23
Q ss_pred CccceEEEee----CchhhHHHHHhcCceEEeec-CCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchh
Q psy2178 201 HPKVKLFIMQ----GGLQSLQEAFHYGVKLICIP-MFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVF 275 (357)
Q Consensus 201 h~~~~~~ith----gG~~s~~eal~~GvP~i~~P-~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~ 275 (357)
..++++|.. |--.++.||+++|+|+|+.- ..+ ....+++...|..++. -+.+++.++|.++++|++.+
T Consensus 256 -~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv~~--~d~~~la~~i~~l~~~~~~~ 328 (359)
T PRK09922 256 -KNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELYTP--GNIDEFVGKLNKVISGEVKY 328 (359)
T ss_pred -hcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEECC--CCHHHHHHHHHHHHhCcccC
Confidence 246777753 33579999999999999875 322 1123444446766653 37899999999999988643
No 109
>PRK10307 putative glycosyl transferase; Provisional
Probab=96.39 E-value=0.045 Score=52.99 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=78.7
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhC---CCceEEEEEcCCc---cC------CCCCcEEEeecCChhh---h
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL---PQYRVLWKWENDV---ME------GLGENIRLQKWMPQQD---I 198 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~---~~~~viw~~~~~~---~~------~~~~nv~~~~~~pq~~---l 198 (357)
+.+.+++..|+... .+-++.++++++.+ +.++++..-.+.. +. ++ +|+.+.+++|+.+ +
T Consensus 227 ~~~~~i~~~G~l~~-----~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l-~~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 227 DGKKIVLYSGNIGE-----KQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGL-PNVHFLPLQPYDRLPAL 300 (412)
T ss_pred CCCEEEEEcCcccc-----ccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCC-CceEEeCCCCHHHHHHH
Confidence 34456777788764 23344455555543 3335554322221 11 22 4799999998764 5
Q ss_pred hcCccceEEE--eeCch------hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 199 LAHPKVKLFI--MQGGL------QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 199 L~h~~~~~~i--thgG~------~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
++. +++++ +..+. +.+.|++++|+|+|+....+.... ..+ + +.|..++.+ +.+++.++|.++++
T Consensus 301 ~~~--aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~--~~i-~-~~G~~~~~~--d~~~la~~i~~l~~ 372 (412)
T PRK10307 301 LKM--ADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELG--QLV-E-GIGVCVEPE--SVEALVAAIAALAR 372 (412)
T ss_pred HHh--cCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHH--HHH-h-CCcEEeCCC--CHHHHHHHHHHHHh
Confidence 643 55544 33221 246899999999999865442111 222 2 678777643 57899999999998
Q ss_pred Ccchhhcccc
Q psy2178 271 DPQVFKSGWM 280 (357)
Q Consensus 271 ~~~~~~~a~~ 280 (357)
|++.++++.+
T Consensus 373 ~~~~~~~~~~ 382 (412)
T PRK10307 373 QALLRPKLGT 382 (412)
T ss_pred CHHHHHHHHH
Confidence 8765544333
No 110
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.31 E-value=0.06 Score=51.35 Aligned_cols=130 Identities=17% Similarity=0.198 Sum_probs=78.1
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCC-CceEEEEEcCCcc-----------CCC---CCcEEE-eecCChh---
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP-QYRVLWKWENDVM-----------EGL---GENIRL-QKWMPQQ--- 196 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~-~~~viw~~~~~~~-----------~~~---~~nv~~-~~~~pq~--- 196 (357)
..+++..|.... .+-++.++++++++. .+++++..++... ..+ ..++.. .+++++.
T Consensus 201 ~~~i~~~Grl~~-----~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 275 (388)
T TIGR02149 201 RPYILFVGRITR-----QKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELV 275 (388)
T ss_pred ceEEEEEccccc-----ccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHH
Confidence 346667787754 333555666666553 2255554443211 011 123543 4567764
Q ss_pred hhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCC----HHHHHHHHHHH
Q psy2178 197 DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLN----EEIIFNALKLV 268 (357)
Q Consensus 197 ~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~----~~~l~~~i~~~ 268 (357)
+++ ..+++++.- |...+++||+++|+|+|+-...+ ....+.+...|..++..+.+ .+++.++|.++
T Consensus 276 ~~~--~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~----~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l 349 (388)
T TIGR02149 276 ELL--SNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGG----IPEVVVDGETGFLVPPDNSDADGFQAELAKAINIL 349 (388)
T ss_pred HHH--HhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCC----HHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHH
Confidence 345 348888763 23457799999999999876532 34445555678877654432 27899999999
Q ss_pred hcCcchhh
Q psy2178 269 LEDPQVFK 276 (357)
Q Consensus 269 l~~~~~~~ 276 (357)
++|++.++
T Consensus 350 ~~~~~~~~ 357 (388)
T TIGR02149 350 LADPELAK 357 (388)
T ss_pred HhCHHHHH
Confidence 98875443
No 111
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.25 E-value=0.053 Score=53.82 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=80.1
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCC-cc-------------CCCCCcEEEeecCChhhhhc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND-VM-------------EGLGENIRLQKWMPQQDILA 200 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~-~~-------------~~~~~nv~~~~~~pq~~lL~ 200 (357)
.+.+++..|.....+ -...+++++....++.+.+++ +.+|+. .. .++.+++.+.+...-.+++
T Consensus 292 ~~~~i~~vGrl~~~K-g~~~li~a~~~l~~~~p~~~l-~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l- 368 (475)
T cd03813 292 EPPVVGLIGRVVPIK-DIKTFIRAAAIVRKKIPDAEG-WVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEYL- 368 (475)
T ss_pred CCcEEEEEecccccc-CHHHHHHHHHHHHHhCCCeEE-EEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHH-
Confidence 345677778876432 123333333333334455344 344432 10 1245788888854445677
Q ss_pred CccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHh------ceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 201 HPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKI------KTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 201 h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~------G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
.++++++.. |--.+++||+++|+|+|+-... .....+.+. ..|..++. -+.+++.++|.++++
T Consensus 369 -~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~~--~d~~~la~ai~~ll~ 441 (475)
T cd03813 369 -PKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVPP--ADPEALARAILRLLK 441 (475)
T ss_pred -HhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEECC--CCHHHHHHHHHHHhc
Confidence 457877754 3346899999999999985432 223334442 25666653 368999999999999
Q ss_pred Ccchhhcc
Q psy2178 271 DPQVFKSG 278 (357)
Q Consensus 271 ~~~~~~~a 278 (357)
|++.++++
T Consensus 442 ~~~~~~~~ 449 (475)
T cd03813 442 DPELRRAM 449 (475)
T ss_pred CHHHHHHH
Confidence 87655443
No 112
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.25 E-value=0.034 Score=53.58 Aligned_cols=86 Identities=15% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCcEEEeecCChhh---hhcCccceEEEe---eCch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCC
Q psy2178 184 GENIRLQKWMPQQD---ILAHPKVKLFIM---QGGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDL 256 (357)
Q Consensus 184 ~~nv~~~~~~pq~~---lL~h~~~~~~it---hgG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~ 256 (357)
.+++.+.+++|+.+ +++ .+++++. +.|. .+++||+++|+|+|+-... .....+.+...|..++..
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~--~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~~~G~lv~~~-- 351 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQ--VSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDGENGLLVDFF-- 351 (396)
T ss_pred cceEEEeCCCCHHHHHHHHH--hCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccCCceEEcCCC--
Confidence 46899999999865 443 4666664 2222 4799999999999987443 233444444457766533
Q ss_pred CHHHHHHHHHHHhcCcchhhc
Q psy2178 257 NEEIIFNALKLVLEDPQVFKS 277 (357)
Q Consensus 257 ~~~~l~~~i~~~l~~~~~~~~ 277 (357)
+.+++.++|.++++|++.++.
T Consensus 352 d~~~la~~i~~ll~~~~~~~~ 372 (396)
T cd03818 352 DPDALAAAVIELLDDPARRAR 372 (396)
T ss_pred CHHHHHHHHHHHHhCHHHHHH
Confidence 589999999999998765443
No 113
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.21 E-value=0.065 Score=55.46 Aligned_cols=137 Identities=18% Similarity=0.144 Sum_probs=83.5
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---c------CCCCCcEEEeecCChh-hhhcCccce
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---M------EGLGENIRLQKWMPQQ-DILAHPKVK 205 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---~------~~~~~nv~~~~~~pq~-~lL~h~~~~ 205 (357)
..++...|.....+ -...+++++.+.+++.+.+++++.-++.. + .++.++|++.+|.++. .++ ..++
T Consensus 517 ~~vIg~VGRL~~~K-G~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll--~aaD 593 (694)
T PRK15179 517 RFTVGTVMRVDDNK-RPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWL--TQFN 593 (694)
T ss_pred CeEEEEEEeCCccC-CHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHH--HhcC
Confidence 34566677765422 23445555555555566645444433322 1 1346789999998764 455 4578
Q ss_pred EEEe---eCc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc----Ccchhhc
Q psy2178 206 LFIM---QGG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE----DPQVFKS 277 (357)
Q Consensus 206 ~~it---hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~----~~~~~~~ 277 (357)
+||. +.| -++++||+++|+|+|+-...+ ....+.+-..|..+...+.+.+++.+++.+++. ++.++++
T Consensus 594 v~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ 669 (694)
T PRK15179 594 AFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARK 669 (694)
T ss_pred EEEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHH
Confidence 7775 445 478999999999999976532 333444445688887666666677777766654 4455544
Q ss_pred cc
Q psy2178 278 GW 279 (357)
Q Consensus 278 a~ 279 (357)
++
T Consensus 670 ar 671 (694)
T PRK15179 670 AA 671 (694)
T ss_pred HH
Confidence 43
No 114
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.11 E-value=0.031 Score=44.76 Aligned_cols=124 Identities=19% Similarity=0.191 Sum_probs=61.3
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHH-HhCCCceEEEEEcC-CccCCC-CCcEEEeecCChh-hhhcCccceEEEee--
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAF-ARLPQYRVLWKWEN-DVMEGL-GENIRLQKWMPQQ-DILAHPKVKLFIMQ-- 210 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al-~~~~~~~viw~~~~-~~~~~~-~~nv~~~~~~pq~-~lL~h~~~~~~ith-- 210 (357)
+.++++|+....+ -...+++.+++.+ ++.+.+++...-.. +.+... .+|+...+|++.. ++++. +++.+.-
T Consensus 3 ~~i~~~g~~~~~k-~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~l~~~~~~~v~~~g~~~e~~~~l~~--~dv~l~p~~ 79 (135)
T PF13692_consen 3 LYIGYLGRIRPDK-GLEELIEAALERLKEKHPDIELIIIGNGPDELKRLRRPNVRFHGFVEELPEILAA--ADVGLIPSR 79 (135)
T ss_dssp EEEE--S-SSGGG-THHHHHH-HHHHHHHHSTTEEEEEECESS-HHCCHHHCTEEEE-S-HHHHHHHHC---SEEEE-BS
T ss_pred ccccccccccccc-cccchhhhHHHHHHHHCcCEEEEEEeCCHHHHHHhcCCCEEEcCCHHHHHHHHHh--CCEEEEEee
Confidence 3455666665321 1223333133333 34455344443222 223333 5699999998643 45644 5555542
Q ss_pred ---CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 211 ---GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 211 ---gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
|--+.+.|++++|+|+|+.+.. .....+..+.|..+ .-+.+++.++|.++++|
T Consensus 80 ~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~~~~~~~---~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 80 FNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEEDGCGVLV---ANDPEELAEAIERLLND 135 (135)
T ss_dssp S-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS---SEEEE----TT-HHHHHHHHHHHHH-
T ss_pred CCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeecCCeEEE---CCCHHHHHHHHHHHhcC
Confidence 2248999999999999997541 11223335666665 22789999999999865
No 115
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=95.99 E-value=0.17 Score=47.25 Aligned_cols=133 Identities=14% Similarity=0.098 Sum_probs=76.6
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhC-CCceEEEEEcCCccC-------------CCCCcEEEeecCChh-hh
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL-PQYRVLWKWENDVME-------------GLGENIRLQKWMPQQ-DI 198 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~-~~~~viw~~~~~~~~-------------~~~~nv~~~~~~pq~-~l 198 (357)
++..+++..|.....+ ..+.+-..+..+.+. +.+++++.-.+.... ...+++.+.++.+.. .+
T Consensus 183 ~~~~~i~~~Gr~~~~K--g~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (355)
T cd03819 183 KGKPVILLPGRLTRWK--GQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAA 260 (355)
T ss_pred CCceEEEEeecccccc--CHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHH
Confidence 3455777778765422 223333333334332 333555443332110 345789999885443 45
Q ss_pred hcCccceEEEeeC----c-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc-Cc
Q psy2178 199 LAHPKVKLFIMQG----G-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE-DP 272 (357)
Q Consensus 199 L~h~~~~~~ithg----G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~-~~ 272 (357)
+ .+++++|+-. | .++++||+++|+|+|+....+ ....+.+.+.|..++. -+.+++.++|..++. ++
T Consensus 261 l--~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~~~g~~~~~--~~~~~l~~~i~~~~~~~~ 332 (355)
T cd03819 261 Y--ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPGETGLLVPP--GDAEALAQALDQILSLLP 332 (355)
T ss_pred H--HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCCCceEEeCC--CCHHHHHHHHHHHHhhCH
Confidence 6 3477776533 2 369999999999999875432 2334444456777653 368899999965553 55
Q ss_pred chhh
Q psy2178 273 QVFK 276 (357)
Q Consensus 273 ~~~~ 276 (357)
+.++
T Consensus 333 ~~~~ 336 (355)
T cd03819 333 EGRA 336 (355)
T ss_pred HHHH
Confidence 4433
No 116
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=95.96 E-value=0.11 Score=51.79 Aligned_cols=131 Identities=15% Similarity=0.155 Sum_probs=77.4
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc----c------CCCCCcEEEeecCChhhhhcCccc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV----M------EGLGENIRLQKWMPQQDILAHPKV 204 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~----~------~~~~~nv~~~~~~pq~~lL~h~~~ 204 (357)
++.++++.|.....+ -...+++++....++.+.+++. .+|... + ..+.+++...++.+-.+++. .+
T Consensus 318 ~~~~il~vGrl~~~K-g~~~li~A~~~l~~~~p~~~l~-i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~~--~a 393 (500)
T TIGR02918 318 KPFSIITASRLAKEK-HIDWLVKAVVKAKKSVPELTFD-IYGEGGEKQKLQKIINENQAQDYIHLKGHRNLSEVYK--DY 393 (500)
T ss_pred CCeEEEEEecccccc-CHHHHHHHHHHHHhhCCCeEEE-EEECchhHHHHHHHHHHcCCCCeEEEcCCCCHHHHHH--hC
Confidence 345667778876422 2233444444444445553433 344321 1 12356788888887778884 47
Q ss_pred eEEEee---Cc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeecc--CCC----HHHHHHHHHHHhcCc
Q psy2178 205 KLFIMQ---GG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYE--DLN----EEIIFNALKLVLEDP 272 (357)
Q Consensus 205 ~~~ith---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~----~~~l~~~i~~~l~~~ 272 (357)
+++|.- -| ..+++||+++|+|+|+.-..+- +...+++-..|..+... .-+ .+++.++|.++++++
T Consensus 394 dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G---~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~~~ 468 (500)
T TIGR02918 394 ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYG---NPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFNSN 468 (500)
T ss_pred CEEEEcCccccccHHHHHHHHhCCCEEEecCCCC---CHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhChH
Confidence 777753 33 4689999999999999754211 23334444457766522 112 678999999999543
No 117
>PLN02764 glycosyltransferase family protein
Probab=95.96 E-value=0.012 Score=57.68 Aligned_cols=64 Identities=20% Similarity=0.374 Sum_probs=41.0
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHH--HccCCCceEEEeecC-----CcCCCC---------CCCeEeecCCCh
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKA--FARLPQYRVLWKWEN-----DVMEGL---------GENIRLQKWMPQ 351 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~--~~~lp~~~v~wk~~~-----~~~~~~---------~~n~~~~~w~pQ 351 (357)
+.+..|+|+||||... +......++... ++..| |+|-+.. +....+ ++.+.+.+|+||
T Consensus 254 q~~~sVvyvsfGS~~~---~~~~q~~ela~gL~~s~~p---flwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ 327 (453)
T PLN02764 254 YEPDSVVFCALGSQVI---LEKDQFQELCLGMELTGSP---FLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQ 327 (453)
T ss_pred CCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCC---eEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCH
Confidence 4577899999999643 444555567666 45555 5555542 111123 455677799999
Q ss_pred hhhhCC
Q psy2178 352 QDILGT 357 (357)
Q Consensus 352 ~~~l~~ 357 (357)
.++|+.
T Consensus 328 ~~vL~h 333 (453)
T PLN02764 328 PLILSH 333 (453)
T ss_pred HHHhcC
Confidence 999963
No 118
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=95.94 E-value=0.15 Score=48.63 Aligned_cols=133 Identities=14% Similarity=0.080 Sum_probs=77.7
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc--------c------CCCCCcEEEeecC--Chh--
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--------M------EGLGENIRLQKWM--PQQ-- 196 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~--------~------~~~~~nv~~~~~~--pq~-- 196 (357)
...+++..|.+...+ -...+++.+....++.+.+++++.-++.. . ....+++.+.++. ++.
T Consensus 189 ~~~~i~~vgrl~~~K-g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 267 (372)
T cd03792 189 ERPYITQVSRFDPWK-DPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEV 267 (372)
T ss_pred CCcEEEEEecccccc-CcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHH
Confidence 344677788876532 22333444333333334435655443311 0 1235678888876 443
Q ss_pred -hhhcCccceEEEeeC---c-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 197 -DILAHPKVKLFIMQG---G-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 197 -~lL~h~~~~~~ithg---G-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
.++ ..+++|+... | ..+++||+++|+|+|+-...+ ....+.+...|...+ +.+.+..+|.+++++
T Consensus 268 ~~~~--~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~~----~~~~~a~~i~~ll~~ 337 (372)
T cd03792 268 NALQ--RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLVD----TVEEAAVRILYLLRD 337 (372)
T ss_pred HHHH--HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEeC----CcHHHHHHHHHHHcC
Confidence 345 4588888643 2 358999999999999875432 122344445566544 356778899999988
Q ss_pred cchhhcc
Q psy2178 272 PQVFKSG 278 (357)
Q Consensus 272 ~~~~~~a 278 (357)
++.++.+
T Consensus 338 ~~~~~~~ 344 (372)
T cd03792 338 PELRRKM 344 (372)
T ss_pred HHHHHHH
Confidence 7665443
No 119
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=95.94 E-value=0.076 Score=52.44 Aligned_cols=125 Identities=17% Similarity=0.253 Sum_probs=87.8
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-------c------CCC-CCcEEEeecCChhhhh
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-------M------EGL-GENIRLQKWMPQQDIL 199 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-------~------~~~-~~nv~~~~~~pq~~lL 199 (357)
++.+||+||+.... +.++.+..=++.++..|. -++|..++.. + .++ .+++++.+-.|..+.+
T Consensus 428 ~~avVf~c~~n~~K---~~pev~~~wmqIL~~vP~-Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~ 503 (620)
T COG3914 428 EDAVVFCCFNNYFK---ITPEVFALWMQILSAVPN-SVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHR 503 (620)
T ss_pred CCeEEEEecCCccc---CCHHHHHHHHHHHHhCCC-cEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHH
Confidence 46699999999886 678999988999999999 9999877622 1 112 5678888877776533
Q ss_pred -cCccceEEEee---CchhhHHHHHhcCceEEeecCCCChHH--HHHHH-HHhceeeeeeccCCCHHHHHHHHH
Q psy2178 200 -AHPKVKLFIMQ---GGLQSLQEAFHYGVKLICIPMFADQDL--NCQRV-GKIKTGIVLEYEDLNEEIIFNALK 266 (357)
Q Consensus 200 -~h~~~~~~ith---gG~~s~~eal~~GvP~i~~P~~~dQ~~--na~~v-~~~G~g~~l~~~~~~~~~l~~~i~ 266 (357)
.+.-+|+|+-- ||+.|..|++..|||++..+ ++||. |+..+ ...|+-..+- +-..+-++.+++
T Consensus 504 a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA--~s~~dYV~~av~ 573 (620)
T COG3914 504 ARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA--DSRADYVEKAVA 573 (620)
T ss_pred HhhchhheeeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc--CCHHHHHHHHHH
Confidence 34567888764 99999999999999999874 67765 33333 3356655443 223444555554
No 120
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.88 E-value=0.11 Score=49.75 Aligned_cols=168 Identities=13% Similarity=0.046 Sum_probs=92.2
Q ss_pred CeeEEEEcCCCccccCCCCCCCeEEeCccccCC---CCCCch-HHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKLVEVGPLHLVD---PKPLDE-SLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLK 161 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~---~~~l~~-~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~ 161 (357)
.+|.++..|....+..+...++++.+..-.-.. +...+. .... +... .+.+++.+|+.... ...+.+.+++
T Consensus 153 ~ad~vi~~S~~l~~~~~~~~~~i~~i~ngvd~~~f~~~~~~~~~~~~-~~~~-~~~~i~y~G~l~~~--~d~~ll~~la- 227 (373)
T cd04950 153 RADLVFTTSPSLYEAKRRLNPNVVLVPNGVDYEHFAAARDPPPPPAD-LAAL-PRPVIGYYGAIAEW--LDLELLEALA- 227 (373)
T ss_pred hCCEEEECCHHHHHHHhhCCCCEEEcccccCHHHhhcccccCCChhH-HhcC-CCCEEEEEeccccc--cCHHHHHHHH-
Confidence 688888888776665444456777665322110 000000 0111 2222 23466777888752 2334444333
Q ss_pred HHHhCCCceEEEEEcC-Cc--cCC--CCCcEEEeecCChhh---hhcCccceEEEe--------eCch-hhHHHHHhcCc
Q psy2178 162 AFARLPQYRVLWKWEN-DV--MEG--LGENIRLQKWMPQQD---ILAHPKVKLFIM--------QGGL-QSLQEAFHYGV 224 (357)
Q Consensus 162 al~~~~~~~viw~~~~-~~--~~~--~~~nv~~~~~~pq~~---lL~h~~~~~~it--------hgG~-~s~~eal~~Gv 224 (357)
+..+.++++..-.+ .. ... ..+|++..+++|+.+ .+++ +++++. .++. +.+.|++++|+
T Consensus 228 --~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~--~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~ 303 (373)
T cd04950 228 --KARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAG--FDVAILPFRLNELTRATSPLKLFEYLAAGK 303 (373)
T ss_pred --HHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHh--CCEEecCCccchhhhcCCcchHHHHhccCC
Confidence 34555466654332 11 111 247999999999765 4533 666553 2232 45899999999
Q ss_pred eEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 225 KLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 225 P~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
|+|+.++. ...+..+ |..+.. -+.+++.++|.+++.++
T Consensus 304 PVVat~~~-------~~~~~~~-~~~~~~--~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 304 PVVATPLP-------EVRRYED-EVVLIA--DDPEEFVAAIEKALLED 341 (373)
T ss_pred CEEecCcH-------HHHhhcC-cEEEeC--CCHHHHHHHHHHHHhcC
Confidence 99987531 1122223 333321 26899999999976543
No 121
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.72 E-value=0.069 Score=51.04 Aligned_cols=202 Identities=15% Similarity=0.115 Sum_probs=114.2
Q ss_pred HHHhcCCCCeeEEEEcCCCccccCCCCCCCeEEeCccccCC-C-CCCchHHHHHhccCCCceEEEecCCccccCCCcHHH
Q psy2178 78 REIYFDSAKDSFMFSFDSRITGYARPMQRKLVEVGPLHLVD-P-KPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFR 155 (357)
Q Consensus 78 ~~l~~~~~~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~-~-~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~ 155 (357)
..+.+ ..|.+++--+.+-++-+...-++.|||--..+. . ...+.+..+.+-..++++|.+--||-... -...
T Consensus 128 ~~i~~---~~D~ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLPGSR~~E---I~rl 201 (373)
T PF02684_consen 128 KKIKK---YVDHLLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLPGSRKSE---IKRL 201 (373)
T ss_pred HHHHH---HHhheeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeCCCCHHH---HHHH
Confidence 44444 567766655555555566667899999544443 1 12223333333223578899999998641 1233
Q ss_pred HHHHHHHH----HhCCCceEEEEEcCCcc--------CCCCCcEEEeec-CChhhhhcCccceEEEeeCchhhHHHHHhc
Q psy2178 156 RKAFLKAF----ARLPQYRVLWKWENDVM--------EGLGENIRLQKW-MPQQDILAHPKVKLFIMQGGLQSLQEAFHY 222 (357)
Q Consensus 156 ~~~i~~al----~~~~~~~viw~~~~~~~--------~~~~~nv~~~~~-~pq~~lL~h~~~~~~ithgG~~s~~eal~~ 222 (357)
+..++++. ++.+.+++++....... .....++.+... -.-.+++. .+++.+.-.| ..++|+...
T Consensus 202 lP~~l~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~--~ad~al~~SG-TaTLE~Al~ 278 (373)
T PF02684_consen 202 LPIFLEAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMA--AADAALAASG-TATLEAALL 278 (373)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHH--hCcchhhcCC-HHHHHHHHh
Confidence 33444443 34455577765543221 111223332222 23445664 4777776665 467899999
Q ss_pred CceEEee-cCCCChHHHHHHHHHhc-eee--ee-e--------ccCCCHHHHHHHHHHHhcCcchhhccccchhhhccC
Q psy2178 223 GVKLICI-PMFADQDLNCQRVGKIK-TGI--VL-E--------YEDLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDG 288 (357)
Q Consensus 223 GvP~i~~-P~~~dQ~~na~~v~~~G-~g~--~l-~--------~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~ 288 (357)
|+|++++ -...=.+.-++++.+.. +|+ .+ + .++.+++.+.+++.++++|++.++..+...+.+++.
T Consensus 279 g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~ 357 (373)
T PF02684_consen 279 GVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEKRKKQKELFREIRQL 357 (373)
T ss_pred CCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999988 33222344566665532 221 11 1 246789999999999999987665555555555544
No 122
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.54 E-value=0.13 Score=49.52 Aligned_cols=84 Identities=11% Similarity=0.128 Sum_probs=58.3
Q ss_pred CCcEEEeecCChh-hhhcCccceEEEe--e--Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCC
Q psy2178 184 GENIRLQKWMPQQ-DILAHPKVKLFIM--Q--GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLN 257 (357)
Q Consensus 184 ~~nv~~~~~~pq~-~lL~h~~~~~~it--h--gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~ 257 (357)
.+++.+.+++++. ..+ ..++++|. + .|. +.+.||+++|+|+|+-+...+.. .+..|.|..+. -+
T Consensus 279 ~~~V~~~G~v~~~~~~~--~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~---~~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYL--AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA---AD 348 (397)
T ss_pred CCCeEEeeecCCHHHHH--HhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC---CC
Confidence 4689999999864 455 34777773 2 344 46999999999999987533221 11235566553 36
Q ss_pred HHHHHHHHHHHhcCcchhhc
Q psy2178 258 EEIIFNALKLVLEDPQVFKS 277 (357)
Q Consensus 258 ~~~l~~~i~~~l~~~~~~~~ 277 (357)
.+++.++|.++++|++.++.
T Consensus 349 ~~~la~ai~~ll~~~~~~~~ 368 (397)
T TIGR03087 349 PADFAAAILALLANPAEREE 368 (397)
T ss_pred HHHHHHHHHHHHcCHHHHHH
Confidence 89999999999998765443
No 123
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.53 E-value=0.2 Score=47.97 Aligned_cols=153 Identities=20% Similarity=0.222 Sum_probs=90.2
Q ss_pred CCCeEEeCccccCC----CCCCchHHHHHhccC-CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc
Q psy2178 105 QRKLVEVGPLHLVD----PKPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV 179 (357)
Q Consensus 105 ~p~v~~vG~l~~~~----~~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~ 179 (357)
+.+++.+|....+. .....+++.+-+.-. ++++++|.+-........+.+.+..+++++.+.+. ++++.+....
T Consensus 166 ~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~-~~~vi~P~~~ 244 (365)
T TIGR03568 166 PDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNK-NYIFTYPNAD 244 (365)
T ss_pred CCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhcc-CCEEEEeCCC
Confidence 35788899766543 111123333333322 34688888854331112346789999999988865 5555542211
Q ss_pred ---------cCC-C--CCcEEEeecCChh---hhhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHH
Q psy2178 180 ---------MEG-L--GENIRLQKWMPQQ---DILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGK 244 (357)
Q Consensus 180 ---------~~~-~--~~nv~~~~~~pq~---~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~ 244 (357)
+.. . .+++.+.+-++.. .++ .+++++|+..+.+- .||.+.|+|+|.+= +.+ ...+
T Consensus 245 p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll--~~a~~vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~ 314 (365)
T TIGR03568 245 AGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL--KNADAVIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRL 314 (365)
T ss_pred CCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH--HhCCEEEEcChhHH-HhhhhcCCCEEeec---CCc----hhhh
Confidence 011 1 4678888876654 456 45899999875544 99999999999762 211 1123
Q ss_pred hceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 245 IKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 245 ~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
.|..+.+ . ..+.++|.++++++++
T Consensus 315 ~g~nvl~-v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 RADSVID-V-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCeEEE-e-CCCHHHHHHHHHHHhC
Confidence 3433221 1 3468999999999553
No 124
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=95.51 E-value=0.11 Score=50.95 Aligned_cols=88 Identities=17% Similarity=0.192 Sum_probs=60.1
Q ss_pred CCCcEEEeecCChhhh---hcCc--cceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeec
Q psy2178 183 LGENIRLQKWMPQQDI---LAHP--KVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEY 253 (357)
Q Consensus 183 ~~~nv~~~~~~pq~~l---L~h~--~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~ 253 (357)
+.+++...+++++.++ +... .+++|+.. |--.+++||+++|+|+|+-...+ ....+.+...|..++.
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv~~ 390 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLVDV 390 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEeCC
Confidence 4567888888887654 4221 23788764 32458999999999999886533 2333444446777654
Q ss_pred cCCCHHHHHHHHHHHhcCcchhh
Q psy2178 254 EDLNEEIIFNALKLVLEDPQVFK 276 (357)
Q Consensus 254 ~~~~~~~l~~~i~~~l~~~~~~~ 276 (357)
. +.+++.++|.++++|++.++
T Consensus 391 ~--d~~~la~~i~~ll~~~~~~~ 411 (439)
T TIGR02472 391 L--DLEAIASALEDALSDSSQWQ 411 (439)
T ss_pred C--CHHHHHHHHHHHHhCHHHHH
Confidence 3 58899999999998876443
No 125
>PLN02275 transferase, transferring glycosyl groups
Probab=95.49 E-value=0.12 Score=49.57 Aligned_cols=75 Identities=15% Similarity=0.258 Sum_probs=52.1
Q ss_pred CcEEEee-cCChhhh---hcCccceEEEee------Cc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeec
Q psy2178 185 ENIRLQK-WMPQQDI---LAHPKVKLFIMQ------GG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEY 253 (357)
Q Consensus 185 ~nv~~~~-~~pq~~l---L~h~~~~~~ith------gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~ 253 (357)
+|+.+.. |+|+.++ + ..+|+++.. -| -+.++||+++|+|+|+....+ ....+++.+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l--~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~eiv~~g~~G~lv~- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLL--GSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGELVKDGKNGLLFS- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHH--HhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHHccCCCCeEEEC-
Confidence 4566655 7888654 6 558888841 12 257999999999999975422 445555666788775
Q ss_pred cCCCHHHHHHHHHHHh
Q psy2178 254 EDLNEEIIFNALKLVL 269 (357)
Q Consensus 254 ~~~~~~~l~~~i~~~l 269 (357)
+.+++.++|.+++
T Consensus 359 ---~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ---SSSELADQLLELL 371 (371)
T ss_pred ---CHHHHHHHHHHhC
Confidence 4788888888764
No 126
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=95.42 E-value=0.045 Score=51.61 Aligned_cols=98 Identities=11% Similarity=0.130 Sum_probs=67.2
Q ss_pred CCCCcEEEeecCChhhhhcC-c-cceEEEeeC-------ch------hhHHHHHhcCceEEeecCCCChHHHHHHHHHhc
Q psy2178 182 GLGENIRLQKWMPQQDILAH-P-KVKLFIMQG-------GL------QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIK 246 (357)
Q Consensus 182 ~~~~nv~~~~~~pq~~lL~h-~-~~~~~ithg-------G~------~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G 246 (357)
...+|+...+|+|++++..+ . ...++...- .. +-+.+.+++|+|+|+.+ ....+..+++.+
T Consensus 204 ~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~~ 279 (333)
T PRK09814 204 ENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVENG 279 (333)
T ss_pred ccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhCC
Confidence 45679999999999875321 1 222222211 11 12677899999999864 345677888899
Q ss_pred eeeeeeccCCCHHHHHHHHHHHhcC--cchhhccccchhhhcc
Q psy2178 247 TGIVLEYEDLNEEIIFNALKLVLED--PQVFKSGWMSLQKWMD 287 (357)
Q Consensus 247 ~g~~l~~~~~~~~~l~~~i~~~l~~--~~~~~~a~~l~~~~~~ 287 (357)
+|..++ +.+++.+++.++..+ .++++|++++++.++.
T Consensus 280 ~G~~v~----~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 280 LGFVVD----SLEELPEIIDNITEEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred ceEEeC----CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhc
Confidence 999986 567888888886432 2577888888887775
No 127
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.39 E-value=0.08 Score=49.67 Aligned_cols=124 Identities=18% Similarity=0.244 Sum_probs=72.4
Q ss_pred EEEecCCccccCCCcHHHHHHHHHHHHhCC-CceEEEEEcCCc----------cCCCCCcEEEeecCChhhhhcC-ccce
Q psy2178 138 IYFSLGTNMKGTSMGDFRRKAFLKAFARLP-QYRVLWKWENDV----------MEGLGENIRLQKWMPQQDILAH-PKVK 205 (357)
Q Consensus 138 v~vs~GS~~~~~~~~~~~~~~i~~al~~~~-~~~viw~~~~~~----------~~~~~~nv~~~~~~pq~~lL~h-~~~~ 205 (357)
.++..|.... .+-...++++++++. .+++++.-++.. .....+++.+.+++++.++... .+++
T Consensus 195 ~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 195 YYLLVGRIVP-----ENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEEecccc-----cCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 3456788764 223445666666654 235554433211 1134678999999998753211 3466
Q ss_pred EEEeeCch-----hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhh
Q psy2178 206 LFIMQGGL-----QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFK 276 (357)
Q Consensus 206 ~~ithgG~-----~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~ 276 (357)
+++.+.-. +++.||+++|+|+|+....+. ...+.+ .|...... +.+.+++.+++++++..+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~~~~----~~l~~~i~~l~~~~~~~~ 335 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYFKVG----DDLASLLEELEADPEEVS 335 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEecCc----hHHHHHHHHHHhCHHHHH
Confidence 66665432 479999999999998754321 111122 23333321 229999999998865443
No 128
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=95.20 E-value=0.27 Score=47.41 Aligned_cols=127 Identities=12% Similarity=0.103 Sum_probs=74.9
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc---------CCCCCcEEEeecCChhh---hhcCc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM---------EGLGENIRLQKWMPQQD---ILAHP 202 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~---------~~~~~nv~~~~~~pq~~---lL~h~ 202 (357)
+..+++..|.....+ -...+++.+....++.+.+++++.-.+... .++.+++...+++|+.+ ++ .
T Consensus 192 ~~~~i~~~grl~~~K-g~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l--~ 268 (398)
T cd03796 192 DKITIVVISRLVYRK-GIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVL--V 268 (398)
T ss_pred CceEEEEEeccchhc-CHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHH--H
Confidence 456777888775422 122333333222234455455554333211 13457799999998754 55 4
Q ss_pred cceEEEee---Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQ---GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ith---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.+++++.- -|. .++.||+++|+|+|+-+..+- ...+. .|.+.... .+.+++.+++.+++++.
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~----~e~i~-~~~~~~~~---~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGI----PEVLP-PDMILLAE---PDVESIVRKLEEAISIL 334 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCc----hhhee-CCceeecC---CCHHHHHHHHHHHHhCh
Confidence 57877753 233 499999999999999766432 12222 23332222 26789999999998753
No 129
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=94.83 E-value=0.37 Score=48.62 Aligned_cols=201 Identities=11% Similarity=-0.004 Sum_probs=111.0
Q ss_pred HHHHhcCCCCeeEEEEcCCCccccCCCCCCCeEEeCccccCC-C-CCCchHHHHHhccC-CCceEEEecCCccccCCCcH
Q psy2178 77 LREIYFDSAKDSFMFSFDSRITGYARPMQRKLVEVGPLHLVD-P-KPLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGD 153 (357)
Q Consensus 77 ~~~l~~~~~~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~-~-~~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~ 153 (357)
...+.+ ..|.+++--+.|-++-+...-++.|||--..+. + .+..++..+-+.-. ++++|-+--||-.. --.
T Consensus 355 ikki~k---~vD~ll~IfPFE~~~y~~~gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~---EI~ 428 (608)
T PRK01021 355 KTILEK---YLDLLLLILPFEQNLFKDSPLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRG---DIL 428 (608)
T ss_pred HHHHHH---HhhhheecCccCHHHHHhcCCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHH---HHH
Confidence 455555 567776655555555566778899999544333 1 12223343333332 56889999999864 123
Q ss_pred HHHHHHHHHHH--hC-CCceEEEEEcCCc----cC----CCC-CcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh
Q psy2178 154 FRRKAFLKAFA--RL-PQYRVLWKWENDV----ME----GLG-ENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH 221 (357)
Q Consensus 154 ~~~~~i~~al~--~~-~~~~viw~~~~~~----~~----~~~-~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~ 221 (357)
..+..++++.+ .+ +..+++....... .. ..+ -.+.+..--...+++ ..+++.+.-.|. .++|+..
T Consensus 429 rllPv~l~aa~~~~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m--~aaD~aLaaSGT-aTLEaAL 505 (608)
T PRK01021 429 RNLTIQVQAFLASSLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPSQFRYELM--RECDCALAKCGT-IVLETAL 505 (608)
T ss_pred HHHHHHHHHHHHHHhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecCcchHHHH--HhcCeeeecCCH-HHHHHHH
Confidence 44555666665 43 2236665432211 11 111 122332110124667 458888887775 6689999
Q ss_pred cCceEEee-cCCCChHHHHHHHHHh---c-------eeee-----ee-ccCCCHHHHHHHHHHHhcCcchhhccccchhh
Q psy2178 222 YGVKLICI-PMFADQDLNCQRVGKI---K-------TGIV-----LE-YEDLNEEIIFNALKLVLEDPQVFKSGWMSLQK 284 (357)
Q Consensus 222 ~GvP~i~~-P~~~dQ~~na~~v~~~---G-------~g~~-----l~-~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~ 284 (357)
.|+|++++ -...=-+.-++++.+. - +|.. +. .++.+++.+.+++ +++.|+..+++.++--+.
T Consensus 506 ~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 506 NQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred hCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 99999987 2222223345666551 1 1221 11 2467899999987 788887655544443333
Q ss_pred hcc
Q psy2178 285 WMD 287 (357)
Q Consensus 285 ~~~ 287 (357)
.++
T Consensus 585 lr~ 587 (608)
T PRK01021 585 LYQ 587 (608)
T ss_pred HHH
Confidence 343
No 130
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=94.72 E-value=0.64 Score=43.86 Aligned_cols=138 Identities=13% Similarity=0.024 Sum_probs=81.0
Q ss_pred chHHHHHhccCCCceEEEecCCccccCC-CcHHHHHHHHHHHHhCCCceEEEEEcCCccCCC--CCcEEEe-ecCChhhh
Q psy2178 123 DESLQKWMDGAPEGVIYFSLGTNMKGTS-MGDFRRKAFLKAFARLPQYRVLWKWENDVMEGL--GENIRLQ-KWMPQQDI 198 (357)
Q Consensus 123 ~~~~~~~l~~~~~~vv~vs~GS~~~~~~-~~~~~~~~i~~al~~~~~~~viw~~~~~~~~~~--~~nv~~~-~~~pq~~l 198 (357)
+++..+-+...+.+.|++=+.+...... -....+..+++.+++.+. .++..-+......+ .-++.+. .-+.-.++
T Consensus 167 d~~vl~~lg~~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~-~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~L 245 (335)
T PF04007_consen 167 DPEVLKELGLDDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGR-NVVIIPRYEDQRELFEKYGVIIPPEPVDGLDL 245 (335)
T ss_pred ChhHHHHcCCCCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCc-eEEEecCCcchhhHHhccCccccCCCCCHHHH
Confidence 3444444553357788888877543211 234667788999998887 55544333222111 1123332 33444578
Q ss_pred hcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHh
Q psy2178 199 LAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVL 269 (357)
Q Consensus 199 L~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l 269 (357)
|.+ ++++|+-|| ....||...|+|.|-+ +.++-...-+.+.+.|. ... .-+.+++.+.+.+.+
T Consensus 246 l~~--a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gl--l~~--~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 246 LYY--ADLVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGL--LYH--STDPDEIVEYVRKNL 308 (335)
T ss_pred HHh--cCEEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCC--eEe--cCCHHHHHHHHHHhh
Confidence 866 999999666 7889999999999986 12222223355667765 222 235666666555433
No 131
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=94.24 E-value=0.32 Score=52.25 Aligned_cols=138 Identities=16% Similarity=0.169 Sum_probs=82.6
Q ss_pred HHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCC----CceEEEEEcCC-cc-------------------
Q psy2178 125 SLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLP----QYRVLWKWEND-VM------------------- 180 (357)
Q Consensus 125 ~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~----~~~viw~~~~~-~~------------------- 180 (357)
++..|+...+++ ++++.|.... .+-+..+++|+..+. ...+.+.+++. ..
T Consensus 469 ~l~r~~~~pdkp-vIL~VGRL~p-----~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~ 542 (1050)
T TIGR02468 469 EIMRFFTNPRKP-MILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLID 542 (1050)
T ss_pred HHHhhcccCCCc-EEEEEcCCcc-----ccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHH
Confidence 456666554455 5666688764 333455566665432 11233334431 10
Q ss_pred -CCCCCcEEEeecCChhh---hhcC--ccceEEEee---Cc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeee
Q psy2178 181 -EGLGENIRLQKWMPQQD---ILAH--PKVKLFIMQ---GG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIV 250 (357)
Q Consensus 181 -~~~~~nv~~~~~~pq~~---lL~h--~~~~~~ith---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~ 250 (357)
..+.++|.+.+++++.+ ++.. ...++||.- =| -.+++||+++|+|+|+-...+- ...+.....|..
T Consensus 543 ~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~----~EII~~g~nGlL 618 (1050)
T TIGR02468 543 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGP----VDIHRVLDNGLL 618 (1050)
T ss_pred HhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCc----HHHhccCCcEEE
Confidence 12457788888888765 3422 122577764 23 3689999999999999865431 122333345777
Q ss_pred eeccCCCHHHHHHHHHHHhcCcch
Q psy2178 251 LEYEDLNEEIIFNALKLVLEDPQV 274 (357)
Q Consensus 251 l~~~~~~~~~l~~~i~~~l~~~~~ 274 (357)
++. -+.+.|.++|.++++|+..
T Consensus 619 VdP--~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 619 VDP--HDQQAIADALLKLVADKQL 640 (1050)
T ss_pred ECC--CCHHHHHHHHHHHhhCHHH
Confidence 653 3688999999999998754
No 132
>KOG4626|consensus
Probab=94.20 E-value=0.26 Score=49.24 Aligned_cols=165 Identities=14% Similarity=0.175 Sum_probs=97.7
Q ss_pred CCCCeEEeCccccCCCCCCchHH---HHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-
Q psy2178 104 MQRKLVEVGPLHLVDPKPLDESL---QKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV- 179 (357)
Q Consensus 104 ~~p~v~~vG~l~~~~~~~l~~~~---~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~- 179 (357)
..|+.++||--..+....++++- ..-..-.+.-|||.+|--... +.++.++.-++.|++.|. .++|..+-..
T Consensus 724 ~lPh~ffi~d~~qk~~~~~dpn~kP~r~~y~Lp~d~vvf~~FNqLyK---idP~~l~~W~~ILk~VPn-S~LwllrfPa~ 799 (966)
T KOG4626|consen 724 YLPHCFFIGDHKQKNQDVLDPNNKPTRSQYGLPEDAVVFCNFNQLYK---IDPSTLQMWANILKRVPN-SVLWLLRFPAV 799 (966)
T ss_pred hCCceEEecCcccccccccCCCCCCCCCCCCCCCCeEEEeechhhhc---CCHHHHHHHHHHHHhCCc-ceeEEEecccc
Confidence 47888888865432211121110 000111235588888877775 778999999999999999 9999875421
Q ss_pred ----c------CC-CCCcEEEeecCChhh-----hhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHH-HHHH
Q psy2178 180 ----M------EG-LGENIRLQKWMPQQD-----ILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLN-CQRV 242 (357)
Q Consensus 180 ----~------~~-~~~nv~~~~~~pq~~-----lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~n-a~~v 242 (357)
+ .+ .|+++.+.+-+...+ .|+.=..+-+.|. |+.|.++.++.||||+.+|.-.--... +-.+
T Consensus 800 ge~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll 878 (966)
T KOG4626|consen 800 GEQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLL 878 (966)
T ss_pred chHHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHH
Confidence 0 12 256676666554432 3333334556665 688999999999999999963322222 2334
Q ss_pred HHhceeeeeeccCCCHHHHHHHHHHHhcCcchhh
Q psy2178 243 GKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFK 276 (357)
Q Consensus 243 ~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~ 276 (357)
...|+|..+-+ ++++-.+.--++-.|.++.+
T Consensus 879 ~~~Gl~hliak---~~eEY~~iaV~Latd~~~L~ 909 (966)
T KOG4626|consen 879 TALGLGHLIAK---NREEYVQIAVRLATDKEYLK 909 (966)
T ss_pred HHcccHHHHhh---hHHHHHHHHHHhhcCHHHHH
Confidence 55788875542 34444333333444544433
No 133
>PHA01633 putative glycosyl transferase group 1
Probab=94.04 E-value=0.32 Score=45.85 Aligned_cols=85 Identities=15% Similarity=0.146 Sum_probs=54.5
Q ss_pred CCCCcEEEee---cCChh---hhhcCccceEEEee---Cc-hhhHHHHHhcCceEEeecC------CCCh------HHHH
Q psy2178 182 GLGENIRLQK---WMPQQ---DILAHPKVKLFIMQ---GG-LQSLQEAFHYGVKLICIPM------FADQ------DLNC 239 (357)
Q Consensus 182 ~~~~nv~~~~---~~pq~---~lL~h~~~~~~ith---gG-~~s~~eal~~GvP~i~~P~------~~dQ------~~na 239 (357)
.+++++.... ++++. +++ ..+++|+.- -| ..+++||+++|+|+|+--. .+++ ..++
T Consensus 198 ~l~~~V~f~g~~G~~~~~dl~~~y--~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v 275 (335)
T PHA01633 198 EVPANVHFVAEFGHNSREYIFAFY--GAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKV 275 (335)
T ss_pred CCCCcEEEEecCCCCCHHHHHHHH--HhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCH
Confidence 4577888874 45554 445 458888864 23 4578999999999998632 2232 2222
Q ss_pred HHHH--HhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 240 QRVG--KIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 240 ~~v~--~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
.... +.|.|..++ ..+.+++.++|.+++.
T Consensus 276 ~~~~~~~~g~g~~~~--~~d~~~la~ai~~~~~ 306 (335)
T PHA01633 276 EEYYDKEHGQKWKIH--KFQIEDMANAIILAFE 306 (335)
T ss_pred HHhcCcccCceeeec--CCCHHHHHHHHHHHHh
Confidence 2222 235555554 5689999999999854
No 134
>PLN00414 glycosyltransferase family protein
Probab=93.96 E-value=0.083 Score=51.91 Aligned_cols=66 Identities=23% Similarity=0.259 Sum_probs=41.9
Q ss_pred CCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC-----cCCCCCC---------CeEeecCCChhh
Q psy2178 288 GAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND-----VMEGLGE---------NIRLQKWMPQQD 353 (357)
Q Consensus 288 ~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~-----~~~~~~~---------n~~~~~w~pQ~~ 353 (357)
+.+..|+|+||||... +......++...+..-.+ .|+|-.... ....+|. ...+.+|+||.+
T Consensus 249 q~~~sVvyvsfGS~~~---~~~~q~~e~a~gL~~s~~-~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~ 324 (446)
T PLN00414 249 FEPGSVVFCAFGTQFF---FEKDQFQEFCLGMELTGL-PFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPL 324 (446)
T ss_pred CCCCceEEEeeccccc---CCHHHHHHHHHHHHHcCC-CeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHH
Confidence 4566899999999643 333444467666655553 788877531 1112343 445569999999
Q ss_pred hhCC
Q psy2178 354 ILGT 357 (357)
Q Consensus 354 ~l~~ 357 (357)
+|..
T Consensus 325 vL~h 328 (446)
T PLN00414 325 ILSH 328 (446)
T ss_pred HhcC
Confidence 9963
No 135
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=93.59 E-value=0.17 Score=48.78 Aligned_cols=64 Identities=19% Similarity=0.264 Sum_probs=47.5
Q ss_pred CcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCCcC--CCCCCCeEeecCCChhhhhC
Q psy2178 290 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM--EGLGENIRLQKWMPQQDILG 356 (357)
Q Consensus 290 ~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~~~--~~~~~n~~~~~w~pQ~~~l~ 356 (357)
.+.++|+++||... ..++...+..++++++++ ++++|..-.... ...++||++..|+||.++|.
T Consensus 238 ~~~~v~v~~Gs~~~--~~~~~~~~~~~~a~~~~~-~~~i~~~g~~~~~~~~~~~~v~~~~~~p~~~ll~ 303 (401)
T cd03784 238 GRPPVYVGFGSMVV--RDPEALARLDVEAVATLG-QRAILSLGWGGLGAEDLPDNVRVVDFVPHDWLLP 303 (401)
T ss_pred CCCcEEEeCCCCcc--cCHHHHHHHHHHHHHHcC-CeEEEEccCccccccCCCCceEEeCCCCHHHHhh
Confidence 45789999998632 233334457888999887 699997754322 35689999999999999885
No 136
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=93.37 E-value=0.2 Score=48.26 Aligned_cols=64 Identities=25% Similarity=0.427 Sum_probs=46.9
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecCC----cCCCCCCCeEeecCCChhhhhC
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND----VMEGLGENIRLQKWMPQQDILG 356 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~~----~~~~~~~n~~~~~w~pQ~~~l~ 356 (357)
....+||+++||..... ....+.+++++++++ ++++|..-.. ....++.|+.+..|+||.++|.
T Consensus 223 ~~~~~v~vs~Gs~~~~~---~~~~~~~~~al~~~~-~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~~ll~ 290 (392)
T TIGR01426 223 DGRPVVLISLGTVFNNQ---PSFYRTCVEAFRDLD-WHVVLSVGRGVDPADLGELPPNVEVRQWVPQLEILK 290 (392)
T ss_pred CCCCEEEEecCccCCCC---HHHHHHHHHHHhcCC-CeEEEEECCCCChhHhccCCCCeEEeCCCCHHHHHh
Confidence 34578999999864322 224557899999999 5888866332 2345789999999999998875
No 137
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=93.05 E-value=0.16 Score=38.62 Aligned_cols=62 Identities=19% Similarity=0.202 Sum_probs=45.8
Q ss_pred HHHHhccC-CCceEEEecCCccccCCCc--HHHHHHHHHHHHhCCCceEEEEEcCCcc---CCCCCcEE
Q psy2178 126 LQKWMDGA-PEGVIYFSLGTNMKGTSMG--DFRRKAFLKAFARLPQYRVLWKWENDVM---EGLGENIR 188 (357)
Q Consensus 126 ~~~~l~~~-~~~vv~vs~GS~~~~~~~~--~~~~~~i~~al~~~~~~~viw~~~~~~~---~~~~~nv~ 188 (357)
+..|+... +++-|.|++|+........ ...+..++++++.++. .++........ ..+|+|++
T Consensus 30 ~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldv-EvV~a~~~~~~~~lg~lP~nVR 97 (97)
T PF06722_consen 30 VPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDV-EVVVALPAAQRAELGELPDNVR 97 (97)
T ss_dssp EEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSS-EEEEEETTCCCGGCCS-TTTEE
T ss_pred CCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCc-EEEEECCHHHHHhhCCCCCCCC
Confidence 44677664 6889999999998621012 2478999999999998 99999987653 46788874
No 138
>PHA01630 putative group 1 glycosyl transferase
Probab=93.02 E-value=1.2 Score=41.91 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=43.7
Q ss_pred cCChhh---hhcCccceEEEe---eCc-hhhHHHHHhcCceEEeecCCC--ChHHHHH--HHHH------------hcee
Q psy2178 192 WMPQQD---ILAHPKVKLFIM---QGG-LQSLQEAFHYGVKLICIPMFA--DQDLNCQ--RVGK------------IKTG 248 (357)
Q Consensus 192 ~~pq~~---lL~h~~~~~~it---hgG-~~s~~eal~~GvP~i~~P~~~--dQ~~na~--~v~~------------~G~g 248 (357)
.+|+.+ ++ ..+++|+. ..| ..+++||+++|+|+|+.-..+ |...+.. .+.+ .++|
T Consensus 197 ~v~~~~l~~~y--~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G 274 (331)
T PHA01630 197 PLPDDDIYSLF--AGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVG 274 (331)
T ss_pred cCCHHHHHHHH--HhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccc
Confidence 366654 45 45788774 232 468999999999999976543 2211110 0000 1234
Q ss_pred eeeeccCCCHHHHHHHHHHHhcC
Q psy2178 249 IVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 249 ~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
..+. .+.+++.+++.+++.|
T Consensus 275 ~~v~---~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 275 YFLD---PDIEDAYQKLLEALAN 294 (331)
T ss_pred cccC---CCHHHHHHHHHHHHhC
Confidence 4333 2567777888888876
No 139
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=92.97 E-value=0.27 Score=47.81 Aligned_cols=63 Identities=25% Similarity=0.357 Sum_probs=48.6
Q ss_pred CCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeecC-C-cCCCCCCCeEeecCCChhhhhC
Q psy2178 289 APEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEN-D-VMEGLGENIRLQKWMPQQDILG 356 (357)
Q Consensus 289 ~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~~-~-~~~~~~~n~~~~~w~pQ~~~l~ 356 (357)
.+..++|+|+||.... ....+..+++++.++ ++|+-..-+ + ...++|.|+.+..|+||..+|.
T Consensus 235 ~d~~~vyvslGt~~~~----~~l~~~~~~a~~~l~-~~vi~~~~~~~~~~~~~p~n~~v~~~~p~~~~l~ 299 (406)
T COG1819 235 ADRPIVYVSLGTVGNA----VELLAIVLEALADLD-VRVIVSLGGARDTLVNVPDNVIVADYVPQLELLP 299 (406)
T ss_pred CCCCeEEEEcCCcccH----HHHHHHHHHHHhcCC-cEEEEeccccccccccCCCceEEecCCCHHHHhh
Confidence 4568999999986432 233467899999999 688865543 2 2578899999999999998874
No 140
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=92.86 E-value=0.97 Score=44.05 Aligned_cols=81 Identities=14% Similarity=0.032 Sum_probs=54.5
Q ss_pred CCCcEEEeecCChhh---hhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHH---Hhceeeeee
Q psy2178 183 LGENIRLQKWMPQQD---ILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVG---KIKTGIVLE 252 (357)
Q Consensus 183 ~~~nv~~~~~~pq~~---lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~---~~G~g~~l~ 252 (357)
+.++|...+++|+.+ +|+ .++++++- +=..++.||+++|+|+|+.-..+.-. ..+. +-..|....
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~--~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~---~iv~~~~~g~~G~l~~ 377 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELS--TASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL---DIVVPWDGGPTGFLAS 377 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHH--hCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCch---heeeccCCCCceEEeC
Confidence 467899999998764 553 46776642 22258899999999999875433211 1111 234565542
Q ss_pred ccCCCHHHHHHHHHHHhcCc
Q psy2178 253 YEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 253 ~~~~~~~~l~~~i~~~l~~~ 272 (357)
+.+++.++|.++++++
T Consensus 378 ----d~~~la~ai~~ll~~~ 393 (419)
T cd03806 378 ----TAEEYAEAIEKILSLS 393 (419)
T ss_pred ----CHHHHHHHHHHHHhCC
Confidence 7899999999999865
No 141
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=92.71 E-value=0.93 Score=41.88 Aligned_cols=119 Identities=14% Similarity=0.028 Sum_probs=74.5
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc-------CC---CCCcEEEeecCChhh---hhcCcc
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM-------EG---LGENIRLQKWMPQQD---ILAHPK 203 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~-------~~---~~~nv~~~~~~pq~~---lL~h~~ 203 (357)
.+++..|.... .+-...+++++++.+. ++++.-.+... .. ..+++...+++++.+ ++ ..
T Consensus 172 ~~i~~~Gr~~~-----~Kg~~~li~~~~~~~~-~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~--~~ 243 (335)
T cd03802 172 DYLLFLGRISP-----EKGPHLAIRAARRAGI-PLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELL--GN 243 (335)
T ss_pred CEEEEEEeecc-----ccCHHHHHHHHHhcCC-eEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHH--Hh
Confidence 35566677754 2234456777777765 76665443221 11 358899999999864 45 34
Q ss_pred ceEEEe----eCc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 204 VKLFIM----QGG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 204 ~~~~it----hgG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
+++++. +.| ..++.||+++|+|+|+-...+ ....+.+...|...+. .+++.+++.++...
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~~~----~~~l~~~l~~l~~~ 308 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLVDS----VEELAAAVARADRL 308 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEeCC----HHHHHHHHHHHhcc
Confidence 666653 233 358999999999999876532 1222333335666642 88999999888643
No 142
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=92.27 E-value=1.3 Score=44.65 Aligned_cols=111 Identities=18% Similarity=0.101 Sum_probs=69.2
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc---c------CCCCCcEEEeecCChh-hhhcCccceE
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV---M------EGLGENIRLQKWMPQQ-DILAHPKVKL 206 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~---~------~~~~~nv~~~~~~pq~-~lL~h~~~~~ 206 (357)
.++.+.|-....+ -....++.+.+.+++.+.+++++.-++.. + .++.+++++.++..+. ++| ..+++
T Consensus 399 ~vIg~VgRl~~~K-g~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~L--aaADV 475 (578)
T PRK15490 399 TTIGGVFRFVGDK-NPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWL--QKMNV 475 (578)
T ss_pred cEEEEEEEEehhc-CHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHH--HhCCE
Confidence 3455556654422 34566666666666666646555433322 1 1345789999886543 456 45888
Q ss_pred EEee---Cc-hhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeecc
Q psy2178 207 FIMQ---GG-LQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYE 254 (357)
Q Consensus 207 ~ith---gG-~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~ 254 (357)
||.. -| -++++||+++|+|+|+....+ +...+.+-..|..++..
T Consensus 476 fVlPS~~EGfp~vlLEAMA~GlPVVATdvGG----~~EiV~dG~nG~LVp~~ 523 (578)
T PRK15490 476 FILFSRYEGLPNVLIEAQMVGVPVISTPAGG----SAECFIEGVSGFILDDA 523 (578)
T ss_pred EEEcccccCccHHHHHHHHhCCCEEEeCCCC----cHHHcccCCcEEEECCC
Confidence 8863 34 569999999999999876532 34445555667777644
No 143
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=91.97 E-value=5.6 Score=37.17 Aligned_cols=159 Identities=12% Similarity=0.117 Sum_probs=90.7
Q ss_pred CeeEEEEcCCCccccCCCCCCCe-EEeCccccCCCCCCchHHHHH---hccCCCceEEEecCCccccCCCcHHHHHH---
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKL-VEVGPLHLVDPKPLDESLQKW---MDGAPEGVIYFSLGTNMKGTSMGDFRRKA--- 158 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v-~~vG~l~~~~~~~l~~~~~~~---l~~~~~~vv~vs~GS~~~~~~~~~~~~~~--- 158 (357)
..|++++..+..+. -.+|| ...|+++.-.+..+.++-.+| +...+++.+.|-.|.-.....+..+....
T Consensus 97 ~FDlvi~p~HD~~~----~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~ 172 (311)
T PF06258_consen 97 PFDLVIVPEHDRLP----RGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLD 172 (311)
T ss_pred ccCEEEECcccCcC----CCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHH
Confidence 57888888777541 23555 456777754333343433344 33345777888887665554566664444
Q ss_pred -HHHHHHhCCCceEEEEEcCCcc-------C-CC--CCcEEEeec---CChhhhhcCccce-EEEeeCchhhHHHHHhcC
Q psy2178 159 -FLKAFARLPQYRVLWKWENDVM-------E-GL--GENIRLQKW---MPQQDILAHPKVK-LFIMQGGLQSLQEAFHYG 223 (357)
Q Consensus 159 -i~~al~~~~~~~viw~~~~~~~-------~-~~--~~nv~~~~~---~pq~~lL~h~~~~-~~ithgG~~s~~eal~~G 223 (357)
+.+.++..+. .++...+.... . .. ...+.+-+- =|....|+. ++ ++||---.+.+.||+..|
T Consensus 173 ~l~~~~~~~~~-~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~--ad~i~VT~DSvSMvsEA~~tG 249 (311)
T PF06258_consen 173 QLAALAAAYGG-SLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAA--ADAIVVTEDSVSMVSEAAATG 249 (311)
T ss_pred HHHHHHHhCCC-eEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHh--CCEEEEcCccHHHHHHHHHcC
Confidence 4444444454 56655544221 1 11 233323222 255678865 54 556666678899999999
Q ss_pred ceEEeecCCCChHH----HHHHHHHhceeeeee
Q psy2178 224 VKLICIPMFADQDL----NCQRVGKIKTGIVLE 252 (357)
Q Consensus 224 vP~i~~P~~~dQ~~----na~~v~~~G~g~~l~ 252 (357)
+|+.++|.-. +.. ..+.+++.|.-..++
T Consensus 250 ~pV~v~~l~~-~~~r~~r~~~~L~~~g~~r~~~ 281 (311)
T PF06258_consen 250 KPVYVLPLPG-RSGRFRRFHQSLEERGAVRPFT 281 (311)
T ss_pred CCEEEecCCC-cchHHHHHHHHHHHCCCEEECC
Confidence 9999998765 222 224445556554443
No 144
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=91.44 E-value=0.69 Score=45.67 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=70.9
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-----c----CCCCCcEEEeecCChh---hhhcCc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-----M----EGLGENIRLQKWMPQQ---DILAHP 202 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-----~----~~~~~nv~~~~~~pq~---~lL~h~ 202 (357)
+..+++..|.....+ ..+.+-..++.+.+.+. ++++.-.++. + ...++++.+..-.++. .++ .
T Consensus 295 ~~~~i~~vGrl~~~K--g~~~li~a~~~l~~~~~-~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~ 369 (476)
T cd03791 295 DAPLFGFVGRLTEQK--GIDLLLEALPELLELGG-QLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIY--A 369 (476)
T ss_pred CCCEEEEEeeccccc--cHHHHHHHHHHHHHcCc-EEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH--H
Confidence 344677778876422 22222222333333343 6666544322 1 1235677765544443 244 4
Q ss_pred cceEEEee----CchhhHHHHHhcCceEEeecCCC--ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 203 KVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFA--DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 203 ~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~--dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
.+++++.- +-..+.+||+++|+|+|+-...+ |...+...-.+.|.|..++. -+.+++.+++.++++
T Consensus 370 ~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~--~~~~~l~~~i~~~l~ 441 (476)
T cd03791 370 GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG--YNADALLAALRRALA 441 (476)
T ss_pred hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC--CCHHHHHHHHHHHHH
Confidence 58888854 22247899999999999875432 21111110112346777763 358899999999875
No 145
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=91.35 E-value=1.6 Score=43.10 Aligned_cols=121 Identities=17% Similarity=0.117 Sum_probs=71.4
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHh---CCCceEEEEEcCC-cc--------CCCCCcEEEeecCChh---hhhc
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFAR---LPQYRVLWKWEND-VM--------EGLGENIRLQKWMPQQ---DILA 200 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~---~~~~~viw~~~~~-~~--------~~~~~nv~~~~~~pq~---~lL~ 200 (357)
..+++..|..... +-++.+++++.+ .+. ++++.-.++ .. ...+.++.+...++.. .++
T Consensus 291 ~~~i~~vGrl~~~-----Kg~~~li~a~~~l~~~~~-~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~- 363 (473)
T TIGR02095 291 VPLFGVISRLTQQ-----KGVDLLLAALPELLELGG-QLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIY- 363 (473)
T ss_pred CCEEEEEecCccc-----cChHHHHHHHHHHHHcCc-EEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH-
Confidence 3467777887652 223333444333 333 766654332 11 1245677776666654 345
Q ss_pred CccceEEEee---Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHh------ceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 201 HPKVKLFIMQ---GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKI------KTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 201 h~~~~~~ith---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~------G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
..+++++.- -|. .+.+||+++|+|+|+-...+ ....+.+. +.|..++. -+.+++.++|.+++.
T Consensus 364 -~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~--~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 364 -AGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEE--YDPGALLAALSRALR 436 (473)
T ss_pred -HhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCC--CCHHHHHHHHHHHHH
Confidence 458888854 233 47899999999999865432 11122222 66777653 468899999999886
No 146
>PRK14098 glycogen synthase; Provisional
Probab=91.29 E-value=1.4 Score=43.97 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=70.7
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-----c----CCCCCcEEEeecCChh---hhhcCccc
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-----M----EGLGENIRLQKWMPQQ---DILAHPKV 204 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-----~----~~~~~nv~~~~~~pq~---~lL~h~~~ 204 (357)
.+++..|.....+ ..+.+-..+..+.+.+. +++..-.++. + ...++++.+...++.. .++ ..+
T Consensus 308 ~~i~~vgRl~~~K--G~d~li~a~~~l~~~~~-~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~--a~a 382 (489)
T PRK14098 308 PLVGVIINFDDFQ--GAELLAESLEKLVELDI-QLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI--AGL 382 (489)
T ss_pred CEEEEeccccccC--cHHHHHHHHHHHHhcCc-EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHH--HhC
Confidence 4666777776422 22222222222322333 6655433321 1 1346789888888874 456 458
Q ss_pred eEEEeeC---c-hhhHHHHHhcCceEEeecCCC--ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHh
Q psy2178 205 KLFIMQG---G-LQSLQEAFHYGVKLICIPMFA--DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVL 269 (357)
Q Consensus 205 ~~~ithg---G-~~s~~eal~~GvP~i~~P~~~--dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l 269 (357)
++|+... | ..+.+||+++|+|.|+....+ |...+ ...+.+.|..++ .-+.+++.++|.+++
T Consensus 383 Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~--~~d~~~la~ai~~~l 449 (489)
T PRK14098 383 DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFH--DYTPEALVAKLGEAL 449 (489)
T ss_pred CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeEeC--CCCHHHHHHHHHHHH
Confidence 8888642 1 137889999999888876533 21110 011235677665 346889999998865
No 147
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.83 E-value=0.85 Score=45.78 Aligned_cols=76 Identities=20% Similarity=0.314 Sum_probs=56.1
Q ss_pred CcEEEeecCCh---hhhhcCccceEEEeeC---chhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCH
Q psy2178 185 ENIRLQKWMPQ---QDILAHPKVKLFIMQG---GLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNE 258 (357)
Q Consensus 185 ~nv~~~~~~pq---~~lL~h~~~~~~ithg---G~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~ 258 (357)
..+.+.++... ..++ ..+.++|.-+ |.++.+||+.+|+|+| .......+++..-|..+. +.
T Consensus 409 ~~v~f~gy~~e~dl~~~~--~~arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~----d~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISAL--DKLRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID----DI 475 (519)
T ss_pred cEEEEEecCCHHHHHHHH--hhheEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC----CH
Confidence 57788888773 2456 4578888765 6779999999999999 222344555555677773 57
Q ss_pred HHHHHHHHHHhcCcc
Q psy2178 259 EIIFNALKLVLEDPQ 273 (357)
Q Consensus 259 ~~l~~~i~~~l~~~~ 273 (357)
.+|.+++..+|.+.+
T Consensus 476 ~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 476 SELLKALDYYLDNLK 490 (519)
T ss_pred HHHHHHHHHHHhCHH
Confidence 899999999998864
No 148
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.61 E-value=1.6 Score=37.41 Aligned_cols=51 Identities=14% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCCCcEEEeecCChh---hhhcCccceEEEeeCc----hhhHHHHHhcCceEEeecCCC
Q psy2178 182 GLGENIRLQKWMPQQ---DILAHPKVKLFIMQGG----LQSLQEAFHYGVKLICIPMFA 233 (357)
Q Consensus 182 ~~~~nv~~~~~~pq~---~lL~h~~~~~~ithgG----~~s~~eal~~GvP~i~~P~~~ 233 (357)
...+|+.+.++++.. ..+. ..++++++... .+++.||+++|+|+|+-+..+
T Consensus 158 ~~~~~v~~~~~~~~~~~~~~~~-~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 158 LLLDRVIFLGGLDPEELLALLL-AAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CCcccEEEeCCCCcHHHHHHHh-hcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 346799999987332 2232 24888888876 689999999999999987544
No 149
>PRK10125 putative glycosyl transferase; Provisional
Probab=90.56 E-value=1.6 Score=42.28 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCce-EEEEEcCCccCCCCCcEEEeecCCh-h---hhhcCccceEEEee----CchhhHHHHHhcCceE
Q psy2178 156 RKAFLKAFARLPQYR-VLWKWENDVMEGLGENIRLQKWMPQ-Q---DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKL 226 (357)
Q Consensus 156 ~~~i~~al~~~~~~~-viw~~~~~~~~~~~~nv~~~~~~pq-~---~lL~h~~~~~~ith----gG~~s~~eal~~GvP~ 226 (357)
...+++++..++. . -++..|... +....++...++... . +++ ..+++||.- |--.+++||+++|+|+
T Consensus 258 ~~~li~A~~~l~~-~~~L~ivG~g~-~~~~~~v~~~g~~~~~~~l~~~y--~~aDvfV~pS~~Egfp~vilEAmA~G~PV 333 (405)
T PRK10125 258 DQQLVREMMALGD-KIELHTFGKFS-PFTAGNVVNHGFETDKRKLMSAL--NQMDALVFSSRVDNYPLILCEALSIGVPV 333 (405)
T ss_pred HHHHHHHHHhCCC-CeEEEEEcCCC-cccccceEEecCcCCHHHHHHHH--HhCCEEEECCccccCcCHHHHHHHcCCCE
Confidence 4667788877654 3 234445422 223456666666532 2 334 447888764 3446899999999999
Q ss_pred EeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHH
Q psy2178 227 ICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNAL 265 (357)
Q Consensus 227 i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i 265 (357)
|+....+= .+ +.+.+.|..++.. +.++|.+++
T Consensus 334 Vat~~gG~----~E-iv~~~~G~lv~~~--d~~~La~~~ 365 (405)
T PRK10125 334 IATHSDAA----RE-VLQKSGGKTVSEE--EVLQLAQLS 365 (405)
T ss_pred EEeCCCCh----HH-hEeCCcEEEECCC--CHHHHHhcc
Confidence 99977651 12 2333468877644 456666543
No 150
>PLN02501 digalactosyldiacylglycerol synthase
Probab=90.50 E-value=2.5 Score=43.62 Aligned_cols=77 Identities=18% Similarity=0.138 Sum_probs=50.6
Q ss_pred cEEEeecCChh-hhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHH
Q psy2178 186 NIRLQKWMPQQ-DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEI 260 (357)
Q Consensus 186 nv~~~~~~pq~-~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~ 260 (357)
++...++.++. +++ ..+++||.- |=..+++||+++|+|+|+.-..+... +.+ |.+..+. -+.++
T Consensus 602 ~V~FLG~~dd~~~ly--asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nGll~---~D~Ea 670 (794)
T PLN02501 602 NLNFLKGRDHADDSL--HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNCLTY---KTSED 670 (794)
T ss_pred EEEecCCCCCHHHHH--HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCeEec---CCHHH
Confidence 45566666654 466 457888764 33468899999999999986654321 112 2222222 25889
Q ss_pred HHHHHHHHhcCcc
Q psy2178 261 IFNALKLVLEDPQ 273 (357)
Q Consensus 261 l~~~i~~~l~~~~ 273 (357)
+.++|.+++.++.
T Consensus 671 fAeAI~~LLsd~~ 683 (794)
T PLN02501 671 FVAKVKEALANEP 683 (794)
T ss_pred HHHHHHHHHhCch
Confidence 9999999998764
No 151
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.94 E-value=4.1 Score=38.83 Aligned_cols=167 Identities=14% Similarity=0.170 Sum_probs=98.8
Q ss_pred CeEEeCccccCC----CCCC--chHHHHH-hccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc
Q psy2178 107 KLVEVGPLHLVD----PKPL--DESLQKW-MDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV 179 (357)
Q Consensus 107 ~v~~vG~l~~~~----~~~l--~~~~~~~-l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~ 179 (357)
+++.+|-...+. .... +.....- +....+..+++++=-......--.+..+++.+.+++.+.+.|+.-.-...
T Consensus 169 ~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~ 248 (383)
T COG0381 169 RIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRP 248 (383)
T ss_pred ceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCCh
Confidence 588888665442 0111 1122221 34445668888875544322112344444445555554446665443321
Q ss_pred -c-----CCC--CCcEEEee---cCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhcee
Q psy2178 180 -M-----EGL--GENIRLQK---WMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTG 248 (357)
Q Consensus 180 -~-----~~~--~~nv~~~~---~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g 248 (357)
. ..+ .+++++.+ +.+...++.+ +.+++|-.| |-.-||...|+|++++=...+++. .++.|.-
T Consensus 249 ~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~--a~~iltDSG-giqEEAp~lg~Pvl~lR~~TERPE----~v~agt~ 321 (383)
T COG0381 249 RVRELVLKRLKNVERVKLIDPLGYLDFHNLMKN--AFLILTDSG-GIQEEAPSLGKPVLVLRDTTERPE----GVEAGTN 321 (383)
T ss_pred hhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHh--ceEEEecCC-chhhhHHhcCCcEEeeccCCCCcc----ceecCce
Confidence 0 112 34577655 4556677744 788888765 356789999999999977777766 2334433
Q ss_pred eeeeccCCCHHHHHHHHHHHhcCcchhhccccchh
Q psy2178 249 IVLEYEDLNEEIIFNALKLVLEDPQVFKSGWMSLQ 283 (357)
Q Consensus 249 ~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~ 283 (357)
+.+ ..+.+.+.+++.+++++++..+++.....
T Consensus 322 ~lv---g~~~~~i~~~~~~ll~~~~~~~~m~~~~n 353 (383)
T COG0381 322 ILV---GTDEENILDAATELLEDEEFYERMSNAKN 353 (383)
T ss_pred EEe---CccHHHHHHHHHHHhhChHHHHHHhcccC
Confidence 333 34679999999999999888776665543
No 152
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=89.55 E-value=3.7 Score=40.12 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=59.8
Q ss_pred hhhcCccceEEEeeCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeee-eeccCCCHHHHHHHHHHHhcC-cch
Q psy2178 197 DILAHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIV-LEYEDLNEEIIFNALKLVLED-PQV 274 (357)
Q Consensus 197 ~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~-l~~~~~~~~~l~~~i~~~l~~-~~~ 274 (357)
.++ .+++++|..= .-++.-|+..|||.+++++ | +-....+.+.|.... .+.++++.+++.+.+.++++| +++
T Consensus 323 ~iI--s~~dl~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~ 396 (426)
T PRK10017 323 KIL--GACELTVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPAL 396 (426)
T ss_pred HHH--hhCCEEEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHHHH
Confidence 566 4589988864 4566778899999999987 3 334455577887755 677788999999999999987 355
Q ss_pred hhccccchhhhc
Q psy2178 275 FKSGWMSLQKWM 286 (357)
Q Consensus 275 ~~~a~~l~~~~~ 286 (357)
++..++..+..+
T Consensus 397 ~~~l~~~v~~~r 408 (426)
T PRK10017 397 NARLAEAVSRER 408 (426)
T ss_pred HHHHHHHHHHHH
Confidence 554444433333
No 153
>PLN02846 digalactosyldiacylglycerol synthase
Probab=89.48 E-value=4.2 Score=40.20 Aligned_cols=73 Identities=11% Similarity=0.113 Sum_probs=48.5
Q ss_pred EeecCChhhhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHH
Q psy2178 189 LQKWMPQQDILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNA 264 (357)
Q Consensus 189 ~~~~~pq~~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~ 264 (357)
..++.+..+++. .+|+||.- +=.++++||+++|+|+|+.-..+. ..+.+-+.|...+ +.+++.++
T Consensus 288 f~G~~~~~~~~~--~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~~-----~~v~~~~ng~~~~----~~~~~a~a 356 (462)
T PLN02846 288 YPGRDHADPLFH--DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPSN-----EFFKQFPNCRTYD----DGKGFVRA 356 (462)
T ss_pred ECCCCCHHHHHH--hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCCc-----ceeecCCceEecC----CHHHHHHH
Confidence 445555556774 47888876 445789999999999999854331 2233333343332 57889999
Q ss_pred HHHHhcCc
Q psy2178 265 LKLVLEDP 272 (357)
Q Consensus 265 i~~~l~~~ 272 (357)
+.+++.++
T Consensus 357 i~~~l~~~ 364 (462)
T PLN02846 357 TLKALAEE 364 (462)
T ss_pred HHHHHccC
Confidence 99988753
No 154
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=87.68 E-value=21 Score=32.33 Aligned_cols=162 Identities=15% Similarity=0.127 Sum_probs=86.9
Q ss_pred eeEEEEcCCCccccCCCCCCCeEEe-CccccCCCCCCchHH---HHHhccCCCceEEEecCCccccCCCcHHHHHHH---
Q psy2178 87 DSFMFSFDSRITGYARPMQRKLVEV-GPLHLVDPKPLDESL---QKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAF--- 159 (357)
Q Consensus 87 ~~~~l~~s~~~l~~~~~~~p~v~~v-G~l~~~~~~~l~~~~---~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i--- 159 (357)
.|++++.-+.-.+....-.+|++.+ |-+|.-.++-+-... .+.++. +++.|-|--|.........++....+
T Consensus 110 fDlvivp~HD~~~~~s~~~~Nilpi~Gs~h~Vt~~~lAa~~e~~~~~~p~-~rq~vAVlVGg~nk~f~~~~d~a~q~~~~ 188 (329)
T COG3660 110 FDLVIVPYHDWREELSDQGPNILPINGSPHNVTSQRLAALREAFKHLLPL-PRQRVAVLVGGNNKAFVFQEDKAHQFASL 188 (329)
T ss_pred ceEEeccchhhhhhhhccCCceeeccCCCCcccHHHhhhhHHHHHhhCCC-CCceEEEEecCCCCCCccCHHHHHHHHHH
Confidence 5677766555544322246777765 434422222232233 333322 35555555555443333555555544
Q ss_pred -HHHHHhCCCceEEEEEcCCccC-----------CCC---CcEEEeecCChhhhhcCccceEEEeeC-chhhHHHHHhcC
Q psy2178 160 -LKAFARLPQYRVLWKWENDVME-----------GLG---ENIRLQKWMPQQDILAHPKVKLFIMQG-GLQSLQEAFHYG 223 (357)
Q Consensus 160 -~~al~~~~~~~viw~~~~~~~~-----------~~~---~nv~~~~~~pq~~lL~h~~~~~~ithg-G~~s~~eal~~G 223 (357)
.+.+++.+. .|+...+....+ ..+ -|-.-.++=|.-++|+ .+|.+|+-. ..+...||.+.|
T Consensus 189 l~k~l~~~g~-~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La--~Adyii~TaDSinM~sEAasTg 265 (329)
T COG3660 189 LVKILENQGG-SFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLA--AADYIISTADSINMCSEAASTG 265 (329)
T ss_pred HHHHHHhCCc-eEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHh--hcceEEEecchhhhhHHHhccC
Confidence 445566677 888887653211 111 1122235568889995 477766654 457889999999
Q ss_pred ceEEee--cCC-CChHH-HHHHHHHhceeeeee
Q psy2178 224 VKLICI--PMF-ADQDL-NCQRVGKIKTGIVLE 252 (357)
Q Consensus 224 vP~i~~--P~~-~dQ~~-na~~v~~~G~g~~l~ 252 (357)
+|+.++ |-+ .+.+. .-+.+++.+++...+
T Consensus 266 kPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~ 298 (329)
T COG3660 266 KPVFILEPPNFNSLKFRIFIEQLVEQKIARPFE 298 (329)
T ss_pred CCeEEEecCCcchHHHHHHHHHHHHhhhccccC
Confidence 999877 333 22222 234455555554443
No 155
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=87.07 E-value=1.6 Score=32.35 Aligned_cols=62 Identities=16% Similarity=0.103 Sum_probs=41.0
Q ss_pred eCchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhc-eeeeeeccCCCHHHHHHHHHHHhcCcchhhcccc
Q psy2178 210 QGGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIK-TGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWM 280 (357)
Q Consensus 210 hgG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G-~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 280 (357)
+|-..-+.|++++|+|+|.-+. ... ..+...| -++..+ +.+++.+++..+++|+..+++..+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~-~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~~~~~~ia~ 71 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGL-REIFEDGEHIITYN----DPEELAEKIEYLLENPEERRRIAK 71 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHH-HHHcCCCCeEEEEC----CHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4555688999999999998643 111 2222233 223322 799999999999999866554433
No 156
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=86.30 E-value=6.9 Score=36.33 Aligned_cols=131 Identities=11% Similarity=0.131 Sum_probs=79.9
Q ss_pred HHhccC-CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-------cC-CCCCcEEEeec--CCh-
Q psy2178 128 KWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-------ME-GLGENIRLQKW--MPQ- 195 (357)
Q Consensus 128 ~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-------~~-~~~~nv~~~~~--~pq- 195 (357)
+++... +++.|.+..|+....+..|.+.+.++++.+.+.+. ++++..++.. +. ..+. ..+.+- +++
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~-~~vl~~g~~~e~~~~~~i~~~~~~-~~l~g~~sL~el 248 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGL-QIVLPWGNDAEKQRAERIAEALPG-AVVLPKMSLAEV 248 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCC-eEEEeCCCHHHHHHHHHHHhhCCC-CeecCCCCHHHH
Confidence 444432 46677777776655567899999999999976665 7776655421 11 1222 223332 333
Q ss_pred hhhhcCccceEEEeeCchhhHHHHHhcCceEEee--cCCCChHHHHHHHHHhceee-ee---eccCCCHHHHHHHHHHHh
Q psy2178 196 QDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICI--PMFADQDLNCQRVGKIKTGI-VL---EYEDLNEEIIFNALKLVL 269 (357)
Q Consensus 196 ~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~--P~~~dQ~~na~~v~~~G~g~-~l---~~~~~~~~~l~~~i~~~l 269 (357)
..++ .+++++|+. -.|.++=|.+.|+|++++ |....+ ..=.|-.. .+ ...+++.+++.++++++|
T Consensus 249 ~ali--~~a~l~I~~-DSgp~HlAaa~g~P~i~lfg~t~p~~------~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 249 AALL--AGADAVVGV-DTGLTHLAAALDKPTVTLYGATDPGR------TGGYGKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHHH--HcCCEEEeC-CChHHHHHHHcCCCEEEEECCCCHhh------cccCCCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 3566 459999996 467788888999999988 321111 00011110 11 245789999999998764
No 157
>PLN00142 sucrose synthase
Probab=86.02 E-value=14 Score=39.15 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=52.3
Q ss_pred CCcEEEeec----CChhhhhcC--ccceEEEee---Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeec
Q psy2178 184 GENIRLQKW----MPQQDILAH--PKVKLFIMQ---GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEY 253 (357)
Q Consensus 184 ~~nv~~~~~----~pq~~lL~h--~~~~~~ith---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~ 253 (357)
.+++...+. .+..++... ..+++||.- -|. .+++||+++|+|+|+-...+ ....+++-..|..++.
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV~P 716 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHIDP 716 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCC
Confidence 456665543 333344321 135677753 344 48999999999999875543 3334444456877764
Q ss_pred cCCCHHHHHHHHHHH----hcCcchhh
Q psy2178 254 EDLNEEIIFNALKLV----LEDPQVFK 276 (357)
Q Consensus 254 ~~~~~~~l~~~i~~~----l~~~~~~~ 276 (357)
. +.+++.++|.++ +.|++.++
T Consensus 717 ~--D~eaLA~aI~~lLekLl~Dp~lr~ 741 (815)
T PLN00142 717 Y--HGDEAANKIADFFEKCKEDPSYWN 741 (815)
T ss_pred C--CHHHHHHHHHHHHHHhcCCHHHHH
Confidence 3 567777777654 46765544
No 158
>PLN02949 transferase, transferring glycosyl groups
Probab=84.87 E-value=1.3 Score=43.73 Aligned_cols=80 Identities=19% Similarity=0.117 Sum_probs=51.8
Q ss_pred CCCcEEEeecCChhh---hhcCccceEEEe---eCch-hhHHHHHhcCceEEeecCCCChHHHHHHHHH--hc-eeeeee
Q psy2178 183 LGENIRLQKWMPQQD---ILAHPKVKLFIM---QGGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGK--IK-TGIVLE 252 (357)
Q Consensus 183 ~~~nv~~~~~~pq~~---lL~h~~~~~~it---hgG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~--~G-~g~~l~ 252 (357)
+.+++...+++|+.+ +|+ ++++++. +-|. .++.||+++|+|+|+....+--. ..+.+ .| .|...
T Consensus 333 L~~~V~f~g~v~~~el~~ll~--~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~- 406 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLG--GAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA- 406 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHH--hCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC-
Confidence 467899999998764 453 4677763 2333 37999999999999986543100 00111 02 23332
Q ss_pred ccCCCHHHHHHHHHHHhcC
Q psy2178 253 YEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 253 ~~~~~~~~l~~~i~~~l~~ 271 (357)
+ +.+++.++|.+++++
T Consensus 407 --~-~~~~la~ai~~ll~~ 422 (463)
T PLN02949 407 --T-TVEEYADAILEVLRM 422 (463)
T ss_pred --C-CHHHHHHHHHHHHhC
Confidence 1 689999999999974
No 159
>PRK00654 glgA glycogen synthase; Provisional
Probab=84.86 E-value=5.8 Score=39.17 Aligned_cols=124 Identities=16% Similarity=0.186 Sum_probs=69.4
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHh---CCCceEEEEEcCCc-----c----CCCCCcEEE-eecCChh---hhh
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFAR---LPQYRVLWKWENDV-----M----EGLGENIRL-QKWMPQQ---DIL 199 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~---~~~~~viw~~~~~~-----~----~~~~~nv~~-~~~~pq~---~lL 199 (357)
..+++..|..... +-+..+++++++ .+. ++++.-+++. + ...+.++.+ ..+ +.. .++
T Consensus 282 ~~~i~~vGRl~~~-----KG~~~li~a~~~l~~~~~-~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~ 354 (466)
T PRK00654 282 APLFAMVSRLTEQ-----KGLDLVLEALPELLEQGG-QLVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIY 354 (466)
T ss_pred CcEEEEeeccccc-----cChHHHHHHHHHHHhcCC-EEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHH
Confidence 3466777887642 223334444433 244 7766543321 1 123556554 455 432 345
Q ss_pred cCccceEEEee---Cch-hhHHHHHhcCceEEeecCCC--ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 200 AHPKVKLFIMQ---GGL-QSLQEAFHYGVKLICIPMFA--DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 200 ~h~~~~~~ith---gG~-~s~~eal~~GvP~i~~P~~~--dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
..+++++.- -|. .+.+||+++|+|.|+-...+ |...+...-.+.+.|..++. -+.+++.++|.++++
T Consensus 355 --~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~--~d~~~la~~i~~~l~ 427 (466)
T PRK00654 355 --AGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDD--FNAEDLLRALRRALE 427 (466)
T ss_pred --hhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCC--CCHHHHHHHHHHHHH
Confidence 458888864 233 48899999999999875432 21111100012266777753 368899999999875
No 160
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=83.87 E-value=12 Score=39.49 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=55.9
Q ss_pred CCCcEEEeecC-Chh---hhhcC--ccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeee
Q psy2178 183 LGENIRLQKWM-PQQ---DILAH--PKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLE 252 (357)
Q Consensus 183 ~~~nv~~~~~~-pq~---~lL~h--~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~ 252 (357)
+.+++...++. +.. +++.+ ..+++||.- +-..+++||+++|+|+|+--..+ .+..+++-..|..++
T Consensus 617 L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg~tGfLVd 692 (784)
T TIGR02470 617 LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDGVSGFHID 692 (784)
T ss_pred CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeC
Confidence 35678877764 332 34421 134677753 22358999999999999865443 334455555687776
Q ss_pred ccCCCHHHHHHHHHHHh----cCcchhh
Q psy2178 253 YEDLNEEIIFNALKLVL----EDPQVFK 276 (357)
Q Consensus 253 ~~~~~~~~l~~~i~~~l----~~~~~~~ 276 (357)
.. +.+++.++|.+++ .|++.++
T Consensus 693 p~--D~eaLA~aL~~ll~kll~dp~~~~ 718 (784)
T TIGR02470 693 PY--HGEEAAEKIVDFFEKCDEDPSYWQ 718 (784)
T ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHH
Confidence 43 5788888888775 5665544
No 161
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=82.36 E-value=8.4 Score=37.83 Aligned_cols=113 Identities=19% Similarity=0.301 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCC------ccCCCCCcEEE-eecCC-h-hhhhcCccceEEEeeCc--hhhHHHHHh
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWEND------VMEGLGENIRL-QKWMP-Q-QDILAHPKVKLFIMQGG--LQSLQEAFH 221 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~------~~~~~~~nv~~-~~~~p-q-~~lL~h~~~~~~ithgG--~~s~~eal~ 221 (357)
...++.+.....++|.+.+-...+.+ .+... +|+.+ ..+.+ . .+++....+-+-|+||. ..++.||+.
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~~L~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~ 369 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTEMSSKLMSLDKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFE 369 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCcccHHHHHHHhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHH
Confidence 57788888888888987776544433 12233 56555 44566 3 36775544556667755 579999999
Q ss_pred cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcch
Q psy2178 222 YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQV 274 (357)
Q Consensus 222 ~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~ 274 (357)
+|+|+++.=.-.. +...+.+ |..... -+.+++.++|.++|.+++.
T Consensus 370 ~G~pI~afd~t~~---~~~~i~~---g~l~~~--~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 370 YNLLILGFEETAH---NRDFIAS---ENIFEH--NEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred cCCcEEEEecccC---CcccccC---CceecC--CCHHHHHHHHHHHhcCHHH
Confidence 9999998743211 1111222 444443 2578999999999988753
No 162
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=81.57 E-value=7.6 Score=36.22 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=27.9
Q ss_pred hhhcCccceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 197 DILAHPKVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 197 ~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
.++..-+-|++|+.++..+..-|-..|+|.+.+
T Consensus 87 ~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 87 NIIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 344445679999999999999999999999976
No 163
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=81.21 E-value=8.5 Score=34.91 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhCCCceEEEEEcCCc--------cC---CCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhc
Q psy2178 154 FRRKAFLKAFARLPQYRVLWKWENDV--------ME---GLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHY 222 (357)
Q Consensus 154 ~~~~~i~~al~~~~~~~viw~~~~~~--------~~---~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~ 222 (357)
...+.+.++.+..+.++++.+.-+.+ .. .....+.+.+-++-.+++. +++.+||..+. .-+||+.+
T Consensus 141 ~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~--~s~~VvtinSt-vGlEAll~ 217 (269)
T PF05159_consen 141 DFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLE--QSDAVVTINST-VGLEALLH 217 (269)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHH--hCCEEEEECCH-HHHHHHHc
Confidence 44445555556665558887765521 11 2233455566677788884 59999997653 67999999
Q ss_pred CceEEee
Q psy2178 223 GVKLICI 229 (357)
Q Consensus 223 GvP~i~~ 229 (357)
|+|++++
T Consensus 218 gkpVi~~ 224 (269)
T PF05159_consen 218 GKPVIVF 224 (269)
T ss_pred CCceEEe
Confidence 9999998
No 164
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=79.89 E-value=21 Score=32.90 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh----cCceEEe
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH----YGVKLIC 228 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~----~GvP~i~ 228 (357)
.+..+.+.+.+++.+. .++.--.... .+... . .+..++. ..++++|+-||-||++.++. .++|+++
T Consensus 24 ~~~~~~i~~~l~~~g~-~~~~~~~~~~--~~~~~----~-~~~~~~~--~~~Dlvi~iGGDGT~L~aa~~~~~~~~PilG 93 (287)
T PRK14077 24 DKEILKLQKILSIYKV-EILLEKESAE--ILDLP----G-YGLDELF--KISDFLISLGGDGTLISLCRKAAEYDKFVLG 93 (287)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecchhh--hhccc----c-cchhhcc--cCCCEEEEECCCHHHHHHHHHhcCCCCcEEE
Confidence 4566677777777666 6655321100 01000 0 1122332 35899999999999998765 4789888
Q ss_pred ecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 229 IPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 229 ~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
+-... +|- ..+++.+++.+++.++++++
T Consensus 94 IN~G~-------------lGF---Lt~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 94 IHAGH-------------LGF---LTDITVDEAEKFFQAFFQGE 121 (287)
T ss_pred EeCCC-------------ccc---CCcCCHHHHHHHHHHHHcCC
Confidence 73210 122 23567888999999988764
No 165
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=79.22 E-value=9.8 Score=34.58 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=60.6
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccC-------CC-CCcEE-Eeec--CCh-hhhhcCc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME-------GL-GENIR-LQKW--MPQ-QDILAHP 202 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~-------~~-~~nv~-~~~~--~pq-~~lL~h~ 202 (357)
++.|.+..|+.......+.+...++++.+.+.+. ++++..++++.. .. ..++. +.+- +.+ ..++ .
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~-~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li--~ 197 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGA-RVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALL--A 197 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCC-EEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHH--H
Confidence 5678888888766566888999999999987755 887765543311 11 12222 2222 122 3456 4
Q ss_pred cceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 203 KVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
+++++|+.-. |.++=|.+.|+|++++
T Consensus 198 ~~~l~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 198 RADLVVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred hCCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 5999999854 6677778999999998
No 166
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.21 E-value=6 Score=36.48 Aligned_cols=62 Identities=19% Similarity=0.202 Sum_probs=42.4
Q ss_pred HHHHhcCceEEeecCCCChHH--HHHHHHH-hceeeeeeccCCCHHHHHHHHHHHhcCcchhhcccc
Q psy2178 217 QEAFHYGVKLICIPMFADQDL--NCQRVGK-IKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWM 280 (357)
Q Consensus 217 ~eal~~GvP~i~~P~~~dQ~~--na~~v~~-~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 280 (357)
-.++--|||+|.+|-.+-|+. .|++-.+ .|..+.+-.. ....-..+.++++.|+.+.+.++.
T Consensus 324 EQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~--~aq~a~~~~q~ll~dp~r~~air~ 388 (412)
T COG4370 324 EQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP--EAQAAAQAVQELLGDPQRLTAIRH 388 (412)
T ss_pred HHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC--chhhHHHHHHHHhcChHHHHHHHh
Confidence 346779999999999988875 5666555 5777766422 233444555569999887766553
No 167
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=79.02 E-value=24 Score=32.66 Aligned_cols=97 Identities=16% Similarity=0.165 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhc----CceEEe
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHY----GVKLIC 228 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~----GvP~i~ 228 (357)
.+.++.+++.+++.+. .+.+......... ..+ .. ..+..++- ..++++|+-||-||+++++.. ++|+++
T Consensus 20 ~e~~~~i~~~L~~~g~-~v~v~~~~~~~~~-~~~--~~-~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~pilG 92 (291)
T PRK02155 20 AEPLESLAAFLAKRGF-EVVFEADTARNIG-LTG--YP-ALTPEEIG--ARADLAVVLGGDGTMLGIGRQLAPYGVPLIG 92 (291)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecchhhhcC-ccc--cc-ccChhHhc--cCCCEEEEECCcHHHHHHHHHhcCCCCCEEE
Confidence 4567778888888776 7665322110000 000 00 01222322 358999999999999999763 678888
Q ss_pred ecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 229 IPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 229 ~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
+-.. .+|-. .+++.+++.+++.+++++.
T Consensus 93 In~G-------------~lGFL---~~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 93 INHG-------------RLGFI---TDIPLDDMQETLPPMLAGN 120 (291)
T ss_pred EcCC-------------Ccccc---ccCCHHHHHHHHHHHHcCC
Confidence 7321 01221 2456788888888887653
No 168
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=78.73 E-value=5.6 Score=36.21 Aligned_cols=54 Identities=22% Similarity=0.288 Sum_probs=38.9
Q ss_pred cceEEEeeCchhhHHHHHh------cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFH------YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~------~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+-||-||++.|+. .++|++++-.. .+|-. .+++.+++.+++.+++++.
T Consensus 35 ~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G-------------~lGFL---~~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 35 NPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG-------------HLGFY---TDWRPFEVDKLVIALAKDP 94 (265)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC-------------Cceec---ccCCHHHHHHHHHHHHcCC
Confidence 4799999999999999976 48899988421 01211 2456777888888887653
No 169
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=76.19 E-value=15 Score=35.11 Aligned_cols=195 Identities=16% Similarity=0.096 Sum_probs=102.0
Q ss_pred CeeEEEEcCCCccccCCCCCCCeEEeCccccCC-C-CCCchHHHHHhcc-CCCceEEEecCCccccCCCcHHHHHHHHHH
Q psy2178 86 KDSFMFSFDSRITGYARPMQRKLVEVGPLHLVD-P-KPLDESLQKWMDG-APEGVIYFSLGTNMKGTSMGDFRRKAFLKA 162 (357)
Q Consensus 86 ~~~~~l~~s~~~l~~~~~~~p~v~~vG~l~~~~-~-~~l~~~~~~~l~~-~~~~vv~vs~GS~~~~~~~~~~~~~~i~~a 162 (357)
..|.++.--+.+-++-....-.+.|||--..+. + .+-.+.+.+-+.. .+++++.+--||-... -..++..+.++
T Consensus 136 ~~D~lLailPFE~~~y~k~g~~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sE---I~rl~~~f~~a 212 (381)
T COG0763 136 YVDHLLAILPFEPAFYDKFGLPCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSE---IRRLLPPFVQA 212 (381)
T ss_pred HhhHeeeecCCCHHHHHhcCCCeEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHH---HHHHHHHHHHH
Confidence 456665444444333334434499999544332 1 2223344444433 3577899999998641 12334444444
Q ss_pred HH----hCCCceEEEEEcCCcc-----CCC-----CCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhcCceEEe
Q psy2178 163 FA----RLPQYRVLWKWENDVM-----EGL-----GENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHYGVKLIC 228 (357)
Q Consensus 163 l~----~~~~~~viw~~~~~~~-----~~~-----~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~ 228 (357)
.. +.+..+|+.-...... ... .-+..+.+--- .+.+ ..+|+.+.-+|. -++|+..+|+||++
T Consensus 213 ~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~--~~aD~al~aSGT-~tLE~aL~g~P~Vv 288 (381)
T COG0763 213 AQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEK-RKAF--AAADAALAASGT-ATLEAALAGTPMVV 288 (381)
T ss_pred HHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchH-HHHH--HHhhHHHHhccH-HHHHHHHhCCCEEE
Confidence 43 3445477765543221 011 12223322221 2344 347777776664 56899999999998
Q ss_pred ec-CCCChHHHHHHHHHhc-e-------eee----eeccCCCHHHHHHHHHHHhcCc----chhhccccchhhhcc
Q psy2178 229 IP-MFADQDLNCQRVGKIK-T-------GIV----LEYEDLNEEIIFNALKLVLEDP----QVFKSGWMSLQKWMD 287 (357)
Q Consensus 229 ~P-~~~dQ~~na~~v~~~G-~-------g~~----l~~~~~~~~~l~~~i~~~l~~~----~~~~~a~~l~~~~~~ 287 (357)
.= .-.=-+.-+++..+.. + |.. +-.++.+++.|.+++.+++.|. .+++....+.+.++.
T Consensus 289 ~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~ 364 (381)
T COG0763 289 AYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRE 364 (381)
T ss_pred EEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcC
Confidence 71 1111123345544422 1 111 1124678999999999999887 334444444444443
No 170
>PRK14099 glycogen synthase; Provisional
Probab=75.91 E-value=23 Score=35.34 Aligned_cols=90 Identities=13% Similarity=0.204 Sum_probs=49.4
Q ss_pred CCcE-EEeecCChhhhhcCccceEEEee---Cch-hhHHHHHhcCceEEeecCCC--ChHHHHHHH-HH--hceeeeeec
Q psy2178 184 GENI-RLQKWMPQQDILAHPKVKLFIMQ---GGL-QSLQEAFHYGVKLICIPMFA--DQDLNCQRV-GK--IKTGIVLEY 253 (357)
Q Consensus 184 ~~nv-~~~~~~pq~~lL~h~~~~~~ith---gG~-~s~~eal~~GvP~i~~P~~~--dQ~~na~~v-~~--~G~g~~l~~ 253 (357)
++++ ...++-....-+-...+++|+.- -|. .+.+||+++|+|.|+-...+ |-..+.... +. .+.|..++.
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~ 428 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP 428 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC
Confidence 4555 45666222221111358888863 333 47789999997776654322 221111000 01 145777653
Q ss_pred cCCCHHHHHHHHHH---HhcCcchh
Q psy2178 254 EDLNEEIIFNALKL---VLEDPQVF 275 (357)
Q Consensus 254 ~~~~~~~l~~~i~~---~l~~~~~~ 275 (357)
-+.+++.++|.+ +++|++.+
T Consensus 429 --~d~~~La~ai~~a~~l~~d~~~~ 451 (485)
T PRK14099 429 --VTADALAAALRKTAALFADPVAW 451 (485)
T ss_pred --CCHHHHHHHHHHHHHHhcCHHHH
Confidence 368899999987 56665443
No 171
>PLN02939 transferase, transferring glycosyl groups
Probab=73.23 E-value=47 Score=35.88 Aligned_cols=83 Identities=19% Similarity=0.216 Sum_probs=53.4
Q ss_pred CCcEEEeecCChh---hhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCC--ChHHH--HHHH-HHhceeeee
Q psy2178 184 GENIRLQKWMPQQ---DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFA--DQDLN--CQRV-GKIKTGIVL 251 (357)
Q Consensus 184 ~~nv~~~~~~pq~---~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~--dQ~~n--a~~v-~~~G~g~~l 251 (357)
.++|....+++.. .++ ..+++|+.- +-..+.+||+++|+|.|+....+ |-..+ ...+ ..-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IY--AaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIY--AASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHH--HhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 5678888888764 356 568999864 22347899999999999876544 21111 0111 112456666
Q ss_pred eccCCCHHHHHHHHHHHhc
Q psy2178 252 EYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 252 ~~~~~~~~~l~~~i~~~l~ 270 (357)
.. -+.+.+..+|.+++.
T Consensus 914 ~~--~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LT--PDEQGLNSALERAFN 930 (977)
T ss_pred cC--CCHHHHHHHHHHHHH
Confidence 53 367888888888764
No 172
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=72.34 E-value=13 Score=32.96 Aligned_cols=92 Identities=13% Similarity=0.135 Sum_probs=56.7
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc--c-------CCCCC-cEEEeecC--Ch-hhhhc
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--M-------EGLGE-NIRLQKWM--PQ-QDILA 200 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~--~-------~~~~~-nv~~~~~~--pq-~~lL~ 200 (357)
+++.|.+..|+.......+.+...++++.+.+.+. +++...++.+ . ...+. .+.+.+-. .+ ..++
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~-~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali- 181 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGY-RVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALI- 181 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT--EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHH-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCc-eEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHH-
Confidence 46788888888877677899999999999988884 8776665533 0 11222 33343322 22 2456
Q ss_pred CccceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 201 HPKVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 201 h~~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
.+++++|+.- .|.++=|.+.|+|+|++
T Consensus 182 -~~a~~~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 -SRADLVIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp -HTSSEEEEES-SHHHHHHHHTT--EEEE
T ss_pred -hcCCEEEecC-ChHHHHHHHHhCCEEEE
Confidence 4599999964 56788888999999998
No 173
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=71.74 E-value=45 Score=30.87 Aligned_cols=97 Identities=19% Similarity=0.095 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh----cCceEEe
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH----YGVKLIC 228 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~----~GvP~i~ 228 (357)
.+..+.+.+.|++.+. .+.+.-... ...+.+- ....+..++- ..++++|+-||-||+++++. .++|+++
T Consensus 19 ~e~~~~i~~~L~~~gi-ev~v~~~~~--~~~~~~~--~~~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~Pvlg 91 (295)
T PRK01231 19 VETLRRLKDFLLDRGL-EVILDEETA--EVLPGHG--LQTVSRKLLG--EVCDLVIVVGGDGSLLGAARALARHNVPVLG 91 (295)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecchh--hhcCccc--ccccchhhcc--cCCCEEEEEeCcHHHHHHHHHhcCCCCCEEE
Confidence 5667777777877766 655432111 0111110 0112222222 24899999999999999875 3679988
Q ss_pred ecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 229 IPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 229 ~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
+... .+|- ..+++.+++.+++.+++++.
T Consensus 92 in~G-------------~lGF---l~~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 92 INRG-------------RLGF---LTDIRPDELEFKLAEVLDGH 119 (295)
T ss_pred EeCC-------------cccc---cccCCHHHHHHHHHHHHcCC
Confidence 8541 1221 13567889999999998754
No 174
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=70.80 E-value=9.4 Score=35.55 Aligned_cols=54 Identities=22% Similarity=0.274 Sum_probs=39.8
Q ss_pred cceEEEeeCchhhHHHHHhc----CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFHY----GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+=||-||++.|... ++|++++-.. .+|- ..+++.+++.+++.+++++.
T Consensus 68 ~~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G-------------~lGF---Lt~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 68 SMKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG-------------HLGF---LTEAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred CcCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC-------------CCcc---cccCCHHHHHHHHHHHHcCC
Confidence 58999999999999999764 7899988321 1121 12456788888888888664
No 175
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=68.52 E-value=11 Score=34.57 Aligned_cols=95 Identities=18% Similarity=0.137 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcC-CccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh---cCceEEe
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWEN-DVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH---YGVKLIC 228 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~-~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~---~GvP~i~ 228 (357)
.+..+.+.+.|++.+. .+.+.... ....... . .+...+.. ..++++|+-||-||+++++. .++|+++
T Consensus 15 ~~~~~~I~~~L~~~g~-~v~v~~~~~~~~~~~~-~------~~~~~~~~-~~~d~vi~iGGDGTlL~a~~~~~~~~pi~g 85 (277)
T PRK03708 15 LKLAYRVYDFLKVSGY-EVVVDSETYEHLPEFS-E------EDVLPLEE-MDVDFIIAIGGDGTILRIEHKTKKDIPILG 85 (277)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecchhhhcCccc-c------cccccccc-cCCCEEEEEeCcHHHHHHHHhcCCCCeEEE
Confidence 5667788888888777 77663211 0000000 0 00011111 25899999999999999884 4679998
Q ss_pred ecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 229 IPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 229 ~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
+|...- |- + .++..+++.+++.+++++.
T Consensus 86 In~G~l-------------GF-l--~~~~~~~~~~~l~~i~~g~ 113 (277)
T PRK03708 86 INMGTL-------------GF-L--TEVEPEETFFALSRLLEGD 113 (277)
T ss_pred EeCCCC-------------Cc-c--ccCCHHHHHHHHHHHHcCC
Confidence 875321 11 1 1345677777777777553
No 176
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=68.28 E-value=54 Score=27.26 Aligned_cols=97 Identities=15% Similarity=0.063 Sum_probs=53.6
Q ss_pred hHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc-cC-CCCCcEEEeec-CChhhhhc
Q psy2178 124 ESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV-ME-GLGENIRLQKW-MPQQDILA 200 (357)
Q Consensus 124 ~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~-~~-~~~~nv~~~~~-~pq~~lL~ 200 (357)
.++-++|.+ +++.+++ |... .......++..+.+. +++=...... .. ...+.....++ .+...++.
T Consensus 21 ~~lg~~La~--~g~~lv~-Gg~~-------GlM~a~a~ga~~~gg-~viGVlp~~l~~~~~~~~~~i~~~~~~~Rk~~m~ 89 (159)
T TIGR00725 21 YRLGKELAK--KGHILIN-GGRT-------GVMEAVSKGAREAGG-LVVGILPDEDFAGNPYLTIKVKTGMNFARNFILV 89 (159)
T ss_pred HHHHHHHHH--CCCEEEc-CCch-------hHHHHHHHHHHHCCC-eEEEECChhhccCCCCceEEEECCCcchHHHHHH
Confidence 345566655 4566777 5432 445666777666666 6654444322 11 11122233444 45555555
Q ss_pred CccceEEEeeCchhhHHH---HHhcCceEEeecC
Q psy2178 201 HPKVKLFIMQGGLQSLQE---AFHYGVKLICIPM 231 (357)
Q Consensus 201 h~~~~~~ithgG~~s~~e---al~~GvP~i~~P~ 231 (357)
..+-.+++--||.||+.| ++.+++|+++++.
T Consensus 90 ~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 90 RSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred HHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 332334455677888765 5779999999874
No 177
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=67.56 E-value=13 Score=34.46 Aligned_cols=54 Identities=15% Similarity=0.208 Sum_probs=39.8
Q ss_pred cceEEEeeCchhhHHHHHh----cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFH----YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+=||-||++.++. .++|++++-... +|- ..+++.+++.+++++++++.
T Consensus 64 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGF---Lt~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 64 SADMVISIGGDGTFLRTATYVGNSNIPILGINTGR-------------LGF---LATVSKEEIEETIDELLNGD 121 (292)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEecCC-------------CCc---ccccCHHHHHHHHHHHHcCC
Confidence 5899999999999999877 378999883311 122 13566788888888888664
No 178
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=67.24 E-value=37 Score=31.57 Aligned_cols=127 Identities=13% Similarity=0.135 Sum_probs=74.5
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCC-c------cCCCCCcEEEeec--CChh-hhhcCccc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND-V------MEGLGENIRLQKW--MPQQ-DILAHPKV 204 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~-~------~~~~~~nv~~~~~--~pq~-~lL~h~~~ 204 (357)
++.|.+..|+.......|.+...++++.+.+.+. ++++..++. + +.+...++.+.+- +.+. .++ .++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~-~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali--~~a 254 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGL-RIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVL--AGA 254 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCC-eEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHH--HhC
Confidence 4566555555444456899999999999977666 776654442 1 1111223333332 3333 456 459
Q ss_pred eEEEeeCchhhHHHHHhcCceEEee--cCCCChH----HHHHHHHHhceeeeeeccCCCHHHHHHHHHHHh
Q psy2178 205 KLFIMQGGLQSLQEAFHYGVKLICI--PMFADQD----LNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVL 269 (357)
Q Consensus 205 ~~~ithgG~~s~~eal~~GvP~i~~--P~~~dQ~----~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l 269 (357)
+++|+.. .|.++=|.+.|+|++++ |...... .|...+ . ..+. ...+++.+++.+++++++
T Consensus 255 ~l~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~-~~~~--cm~~I~~e~V~~~~~~~l 320 (322)
T PRK10964 255 KAVVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-R-SPGK--SMADLSAETVFQKLETLI 320 (322)
T ss_pred CEEEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-c-CCCc--ccccCCHHHHHHHHHHHh
Confidence 9999964 67888899999999998 4321110 011000 0 0011 134678888888888776
No 179
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=67.22 E-value=13 Score=34.58 Aligned_cols=54 Identities=17% Similarity=0.270 Sum_probs=40.2
Q ss_pred cceEEEeeCchhhHHHHHh----cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFH----YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+=||-||++.|.. .++|++++... .+|-. .++..+++.+++.+++++.
T Consensus 72 ~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G-------------~lGFL---~~~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 72 GCELVLVLGGDGTILRAAELARAADVPVLGVNLG-------------HVGFL---AEAEAEDLDEAVERVVDRD 129 (306)
T ss_pred CCCEEEEEcCCHHHHHHHHHhccCCCcEEEEecC-------------CCcee---ccCCHHHHHHHHHHHHcCC
Confidence 5899999999999999876 47899988431 12222 2456788888888888764
No 180
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=66.58 E-value=51 Score=31.06 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=62.7
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc--c---C---C-C-CCc-EEEeec--CCh-hhhh
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--M---E---G-L-GEN-IRLQKW--MPQ-QDIL 199 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~--~---~---~-~-~~n-v~~~~~--~pq-~~lL 199 (357)
+++.|.+..|+....+..|.+.+.++++.|.+.+. ++++..++++ . . . . ..+ +-+.+- +.+ ..++
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~-~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali 260 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGY-EVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALI 260 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCC-eEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHH
Confidence 35788889898766667899999999999987666 8877655422 1 1 1 1 112 222332 233 3566
Q ss_pred cCccceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 200 AHPKVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 200 ~h~~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
.+++++|+.- .|-++=|.+.|+|++++
T Consensus 261 --~~a~l~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 261 --DHAQLFIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred --HhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 4599999974 56778888999999988
No 181
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=66.48 E-value=13 Score=34.39 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCc---cCCC-CCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh----cCc
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWENDV---MEGL-GENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH----YGV 224 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~~---~~~~-~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~----~Gv 224 (357)
.+..+.+.+.|.+.+. .++.--.... .... ..+. ...+..++. ..++++|+=||-||++.|.. .++
T Consensus 20 ~~~~~~l~~~L~~~g~-~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~D~vi~lGGDGT~L~aa~~~~~~~~ 93 (296)
T PRK04539 20 QDTAHTLITFLKQHGF-TVYLDEVGIKEGCIYTQDTVGC---HIVNKTELG--QYCDLVAVLGGDGTFLSVAREIAPRAV 93 (296)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecccccccchhccccccc---cccchhhcC--cCCCEEEEECCcHHHHHHHHHhcccCC
Confidence 4556677777777776 6654311100 0000 0010 111222332 25899999999999999875 478
Q ss_pred eEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 225 KLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 225 P~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
|++++-.. .+|-. .+++.+++.+++.+++++.
T Consensus 94 PilGIN~G-------------~lGFL---~~~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 94 PIIGINQG-------------HLGFL---TQIPREYMTDKLLPVLEGK 125 (296)
T ss_pred CEEEEecC-------------CCeEe---eccCHHHHHHHHHHHHcCC
Confidence 99988321 02222 2466788888888888653
No 182
>PLN02929 NADH kinase
Probab=65.92 E-value=11 Score=35.04 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=59.3
Q ss_pred cHHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh---cCceEEe
Q psy2178 152 GDFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH---YGVKLIC 228 (357)
Q Consensus 152 ~~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~---~GvP~i~ 228 (357)
..+..+.+.+.|++.+. .+.-..+.+ + .... ..++++|+-||-||++.|.. .++|+++
T Consensus 32 h~~~~~~~~~~L~~~gi-~~~~v~r~~-~---------------~~~~--~~~Dlvi~lGGDGT~L~aa~~~~~~iPvlG 92 (301)
T PLN02929 32 HKDTVNFCKDILQQKSV-DWECVLRNE-L---------------SQPI--RDVDLVVAVGGDGTLLQASHFLDDSIPVLG 92 (301)
T ss_pred hHHHHHHHHHHHHHcCC-EEEEeeccc-c---------------cccc--CCCCEEEEECCcHHHHHHHHHcCCCCcEEE
Confidence 45667777788887776 552221111 0 0112 35899999999999999855 4689999
Q ss_pred ecCCC------ChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 229 IPMFA------DQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 229 ~P~~~------dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
+-... .+++|.-- +....|-.. +++.+++.+++.+++++.
T Consensus 93 IN~Gp~~~~~~~~~~~~~~-~~r~lGfL~---~~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 93 VNSDPTQKDEVEEYSDEFD-ARRSTGHLC---AATAEDFEQVLDDVLFGR 138 (301)
T ss_pred EECCCcccccccccccccc-cccCccccc---cCCHHHHHHHHHHHHcCC
Confidence 85431 12222211 111234332 456889999999999764
No 183
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=65.87 E-value=17 Score=33.10 Aligned_cols=55 Identities=11% Similarity=0.172 Sum_probs=38.6
Q ss_pred cceEEEeeCchhhHHHHHhc-----CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFHY-----GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~~-----GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+=||-||++.|+.. .+|++++-..+ .+|-. .+++.+++.+++.++++++
T Consensus 39 ~~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------~lGFL---~~~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 39 NANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------QLGFY---CDFHIDDLDKMIQAITKEE 98 (264)
T ss_pred CccEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------CCeEc---ccCCHHHHHHHHHHHHcCC
Confidence 47999999999999999874 57877774311 11221 3566788888888887654
No 184
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=65.70 E-value=47 Score=31.13 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=62.8
Q ss_pred CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCC--c------cC-CCCC-cEE-Eeec--CChh-hhh
Q psy2178 134 PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND--V------ME-GLGE-NIR-LQKW--MPQQ-DIL 199 (357)
Q Consensus 134 ~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~--~------~~-~~~~-nv~-~~~~--~pq~-~lL 199 (357)
+++.|.+..|+....+..+.+...++++.+.+.+. ++++..+++ + +. ..+. ++. +.+- +.+. .++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~-~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali 258 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGY-EVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALI 258 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHH
Confidence 45778888888766667889999999999877665 877765432 1 11 1111 221 2222 2333 456
Q ss_pred cCccceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 200 AHPKVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 200 ~h~~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
.+++++|+. -.|.++=|.+.|+|+|++
T Consensus 259 --~~a~l~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 259 --DHARLFIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred --HhCCEEEec-CCHHHHHHHHcCCCEEEE
Confidence 469999997 567888899999999988
No 185
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=65.22 E-value=36 Score=32.00 Aligned_cols=91 Identities=14% Similarity=0.074 Sum_probs=63.4
Q ss_pred CceEEEecC-CccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccC-------CCCCcEEEeecC--Chh-hhhcCcc
Q psy2178 135 EGVIYFSLG-TNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME-------GLGENIRLQKWM--PQQ-DILAHPK 203 (357)
Q Consensus 135 ~~vv~vs~G-S~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~-------~~~~nv~~~~~~--pq~-~lL~h~~ 203 (357)
++.|.++.| |....+..+.+...++++.+.+.+. +|++..++++.+ ..+..+.+.+-. .+. .++ ..
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~-~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li--~~ 251 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGY-QVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALI--AG 251 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCC-EEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHH--hc
Confidence 688999999 5545566899999999999999885 888776663311 122222233332 332 455 35
Q ss_pred ceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 204 VKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 204 ~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
++++|+. -.|-++=|.+.|+|.|++
T Consensus 252 a~l~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 252 ADLVIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred CCEEEcc-CChHHHHHHHcCCCEEEE
Confidence 8998885 456777788999999998
No 186
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=64.75 E-value=19 Score=33.33 Aligned_cols=97 Identities=22% Similarity=0.167 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh----cCceEEe
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH----YGVKLIC 228 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~----~GvP~i~ 228 (357)
.+..+.+.+-|++.+. .+...-......... + ....+..++. ..++++|+=||-||++.++. .++|+++
T Consensus 20 ~~~~~~i~~~l~~~g~-~v~~~~~~~~~~~~~-~---~~~~~~~~~~--~~~d~vi~lGGDGT~L~aa~~~~~~~~Pilg 92 (292)
T PRK03378 20 LTTHEMLYHWLTSKGY-EVIVEQQIAHELQLK-N---VKTGTLAEIG--QQADLAIVVGGDGNMLGAARVLARYDIKVIG 92 (292)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecchhhhcCcc-c---ccccchhhcC--CCCCEEEEECCcHHHHHHHHHhcCCCCeEEE
Confidence 4556667777777666 655421110000000 0 0011222322 35899999999999999974 3789888
Q ss_pred ecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 229 IPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 229 ~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
+-... +|-. .+++.+++.+++++++++.
T Consensus 93 in~G~-------------lGFl---~~~~~~~~~~~l~~i~~g~ 120 (292)
T PRK03378 93 INRGN-------------LGFL---TDLDPDNALQQLSDVLEGH 120 (292)
T ss_pred EECCC-------------CCcc---cccCHHHHHHHHHHHHcCC
Confidence 73311 1222 2456788999999998754
No 187
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=63.38 E-value=47 Score=30.94 Aligned_cols=92 Identities=13% Similarity=0.105 Sum_probs=61.3
Q ss_pred CCceEEEecCCcc-ccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccC-------CCCCcEE-Eeec--CCh-hhhhcC
Q psy2178 134 PEGVIYFSLGTNM-KGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME-------GLGENIR-LQKW--MPQ-QDILAH 201 (357)
Q Consensus 134 ~~~vv~vs~GS~~-~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~-------~~~~nv~-~~~~--~pq-~~lL~h 201 (357)
+++.|.+.-|+.. ..+..+.+...++++.+.+.+. +++..-++++.+ ..+.++. +.+- +.+ ..++
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~-~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali-- 249 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGY-QVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLI-- 249 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCC-EEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHH--
Confidence 3678888888853 4566899999999999877665 777654433311 1222322 2222 233 3466
Q ss_pred ccceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 202 PKVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
.+++++|+.- .|-++=|.+.|+|+|++
T Consensus 250 ~~a~l~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 250 ALAKAVVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred HhCCEEEeeC-CHHHHHHHHcCCCEEEE
Confidence 4599999964 56778888999999988
No 188
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.87 E-value=20 Score=32.72 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=39.4
Q ss_pred cceEEEeeCchhhHHHHHh-cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFH-YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~-~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+=||-||++.++. ...|++++-.. .+|-. .+++.+++.+++++++++.
T Consensus 52 ~~D~vi~lGGDGT~L~a~~~~~~PilGIN~G-------------~lGFL---~~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADVIITIGGDGTILRTLQRAKGPILGINMG-------------GLGFL---TEIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCEEEEEcCcHHHHHHHHHcCCCEEEEECC-------------CCccC---cccCHHHHHHHHHHHHcCC
Confidence 4899999999999999987 45688877321 11221 2567788889999988763
No 189
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=60.30 E-value=54 Score=30.84 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=60.5
Q ss_pred CCceEEEecCCcc-ccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccC-------CCCC----c-EEEeec--CCh-hh
Q psy2178 134 PEGVIYFSLGTNM-KGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME-------GLGE----N-IRLQKW--MPQ-QD 197 (357)
Q Consensus 134 ~~~vv~vs~GS~~-~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~-------~~~~----n-v~~~~~--~pq-~~ 197 (357)
+++.|.+..|+.. ..+..|.+.+.++++.+.+.+. +++..-++++.+ ..+. + +-+.+- +.+ ..
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~-~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~a 257 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGY-QVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVI 257 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCC-eEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHH
Confidence 4678888988863 4456899999999998876565 776654433211 1111 1 122222 223 24
Q ss_pred hhcCccceEEEeeCchhhHHHHHhcCceEEee
Q psy2178 198 ILAHPKVKLFIMQGGLQSLQEAFHYGVKLICI 229 (357)
Q Consensus 198 lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~ 229 (357)
++ .+++++|+. -.|-++=|.+.|+|++++
T Consensus 258 li--~~a~l~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 258 LI--AACKAIVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HH--HhCCEEEec-CChHHHHHHHhCCCEEEE
Confidence 66 459999995 467888899999999987
No 190
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.11 E-value=19 Score=32.88 Aligned_cols=53 Identities=25% Similarity=0.385 Sum_probs=37.9
Q ss_pred cceEEEeeCchhhHHHHHh----cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 203 KVKLFIMQGGLQSLQEAFH----YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
.++++|+=||-||++.|+. .++|++++-... +|-. .+++.+++.+.+.+++++
T Consensus 42 ~~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G~-------------lGFL---~~~~~~~~~~~l~~~~~~ 98 (272)
T PRK02231 42 RAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRGN-------------LGFL---TDIDPKNAYEQLEACLER 98 (272)
T ss_pred CCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCCC-------------Cccc---ccCCHHHHHHHHHHHHhc
Confidence 4899999999999998755 368998883211 2322 245677888888888773
No 191
>PLN02316 synthase/transferase
Probab=60.01 E-value=81 Score=34.58 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=52.6
Q ss_pred CCcEEEeecCChh---hhhcCccceEEEee----CchhhHHHHHhcCceEEeecCCC--ChHHHH----HHHHH---hce
Q psy2178 184 GENIRLQKWMPQQ---DILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFA--DQDLNC----QRVGK---IKT 247 (357)
Q Consensus 184 ~~nv~~~~~~pq~---~lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~--dQ~~na----~~v~~---~G~ 247 (357)
++++.+....+.. .++ ..+|+|+.- +=..+.+||+++|+|.|+-...+ |..... .+.+. .+.
T Consensus 899 ~~rV~f~g~~de~lah~iy--aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~t 976 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIY--AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPN 976 (1036)
T ss_pred CCeEEEEecCCHHHHHHHH--HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCc
Confidence 4667766555553 355 568999864 22358899999999988775533 221111 00011 245
Q ss_pred eeeeeccCCCHHHHHHHHHHHhcC
Q psy2178 248 GIVLEYEDLNEEIIFNALKLVLED 271 (357)
Q Consensus 248 g~~l~~~~~~~~~l~~~i~~~l~~ 271 (357)
|..++ .-+.+.+..+|.+++.+
T Consensus 977 Gflf~--~~d~~aLa~AL~raL~~ 998 (1036)
T PLN02316 977 GFSFD--GADAAGVDYALNRAISA 998 (1036)
T ss_pred eEEeC--CCCHHHHHHHHHHHHhh
Confidence 66665 44688999999998865
No 192
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=57.03 E-value=25 Score=31.86 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=55.2
Q ss_pred cHHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHh-cCceEEeec
Q psy2178 152 GDFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFH-YGVKLICIP 230 (357)
Q Consensus 152 ~~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~-~GvP~i~~P 230 (357)
..+..+.+.+-+.+.+. .+.|..... +. . ..++++|+=||-||++.|+. .++|++++-
T Consensus 11 ~~~~~~~~~~~l~~~~~-~~~~~~~~~---------------~~---~--~~~d~vi~iGGDGT~L~a~~~~~~Pilgin 69 (256)
T PRK14075 11 KEKEAKFLKEKISKEHE-VVEFCEASA---------------SG---K--VTADLIIVVGGDGTVLKAAKKVGTPLVGFK 69 (256)
T ss_pred HHHHHHHHHHHHHHcCC-eeEeecccc---------------cc---c--CCCCEEEEECCcHHHHHHHHHcCCCEEEEe
Confidence 35666777777777776 666642211 11 1 35799999999999999877 588888873
Q ss_pred CCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 231 MFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 231 ~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
... +|-. .+++.+++.+++.+++++.
T Consensus 70 ~G~-------------lGfl---~~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 70 AGR-------------LGFL---SSYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCC-------------Cccc---cccCHHHHHHHHHHHHcCC
Confidence 211 2222 2456778888888887653
No 193
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=53.70 E-value=41 Score=33.23 Aligned_cols=86 Identities=12% Similarity=0.144 Sum_probs=52.7
Q ss_pred eecCChhhhhc-CccceEEEe---eCch-hhHHHHHhcCce----EEeecCCCChHHHHHHHHHhceeeeeeccCCCHHH
Q psy2178 190 QKWMPQQDILA-HPKVKLFIM---QGGL-QSLQEAFHYGVK----LICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEI 260 (357)
Q Consensus 190 ~~~~pq~~lL~-h~~~~~~it---hgG~-~s~~eal~~GvP----~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~ 260 (357)
...+++.++.+ ...+++|+. +-|. .++.||+++|+| +|+--..+-. ..+ +-|..++. -+.++
T Consensus 341 ~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l---~~gllVnP--~d~~~ 411 (456)
T TIGR02400 341 NRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL---NGALLVNP--YDIDG 411 (456)
T ss_pred cCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh---CCcEEECC--CCHHH
Confidence 34566665421 155888886 3465 477899999999 6655443321 112 23666653 36889
Q ss_pred HHHHHHHHhcCc--chhhccccchhh
Q psy2178 261 IFNALKLVLEDP--QVFKSGWMSLQK 284 (357)
Q Consensus 261 l~~~i~~~l~~~--~~~~~a~~l~~~ 284 (357)
+.++|.++++.+ +-+++.+++.+.
T Consensus 412 lA~aI~~aL~~~~~er~~r~~~~~~~ 437 (456)
T TIGR02400 412 MADAIARALTMPLEEREERHRAMMDK 437 (456)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999999754 344444444443
No 194
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=53.64 E-value=30 Score=34.41 Aligned_cols=55 Identities=24% Similarity=0.277 Sum_probs=39.7
Q ss_pred ccceEEEeeCchhhHHHHHhc----CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 202 PKVKLFIMQGGLQSLQEAFHY----GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
..++++|+=||-||++.|... ++|++++-.. . +|-. .+++.+++.+++.++++++
T Consensus 261 ~~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~G-----------~--LGFL---t~i~~~e~~~~Le~il~G~ 319 (508)
T PLN02935 261 TKVDLVITLGGDGTVLWAASMFKGPVPPVVPFSMG-----------S--LGFM---TPFHSEQYRDCLDAILKGP 319 (508)
T ss_pred cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-----------C--ccee---cccCHHHHHHHHHHHHcCC
Confidence 358999999999999999763 5788877211 1 2222 3567888888888888764
No 195
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=53.38 E-value=32 Score=35.12 Aligned_cols=54 Identities=24% Similarity=0.440 Sum_probs=40.5
Q ss_pred cceEEEeeCchhhHHHHHh----cCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 203 KVKLFIMQGGLQSLQEAFH----YGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
.++++|+-||-||++.+.. .++|++++-... +|- ..+++.+++.+++.+++++.
T Consensus 348 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~-------------lGF---L~~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 348 EISHIISIGGDGTVLRASKLVNGEEIPIICINMGT-------------VGF---LTEFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC-------------CCc---CcccCHHHHHHHHHHHHcCC
Confidence 4799999999999999876 378999883311 122 23567889999999998764
No 196
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=49.96 E-value=50 Score=33.62 Aligned_cols=73 Identities=8% Similarity=-0.044 Sum_probs=42.5
Q ss_pred hhhhhcCccceEEEe---eCc-hhhHHHHHhcCceEEeecCCC-ChHHHHHHHHHh--ceeeeeeccC-----CCHHHHH
Q psy2178 195 QQDILAHPKVKLFIM---QGG-LQSLQEAFHYGVKLICIPMFA-DQDLNCQRVGKI--KTGIVLEYED-----LNEEIIF 262 (357)
Q Consensus 195 q~~lL~h~~~~~~it---hgG-~~s~~eal~~GvP~i~~P~~~-dQ~~na~~v~~~--G~g~~l~~~~-----~~~~~l~ 262 (357)
..+++ ..|++|+. +-| ..+++||+++|+|+|.-...+ .... ..+... ..|+.+...+ -+.+++.
T Consensus 468 y~E~~--~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v--~E~v~~~~~~gi~V~~r~~~~~~e~v~~La 543 (590)
T cd03793 468 YEEFV--RGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFM--EEHIEDPESYGIYIVDRRFKSPDESVQQLT 543 (590)
T ss_pred hHHHh--hhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhh--HHHhccCCCceEEEecCCccchHHHHHHHH
Confidence 34555 55888887 334 458999999999999986522 1111 222221 2465553211 1345677
Q ss_pred HHHHHHhcC
Q psy2178 263 NALKLVLED 271 (357)
Q Consensus 263 ~~i~~~l~~ 271 (357)
+++.++++.
T Consensus 544 ~~m~~~~~~ 552 (590)
T cd03793 544 QYMYEFCQL 552 (590)
T ss_pred HHHHHHhCC
Confidence 777777743
No 197
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=49.93 E-value=68 Score=28.55 Aligned_cols=81 Identities=25% Similarity=0.439 Sum_probs=50.3
Q ss_pred CCcEEEeecCCh---hhhhcCccceEEEee---Cchh-hHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCC
Q psy2178 184 GENIRLQKWMPQ---QDILAHPKVKLFIMQ---GGLQ-SLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDL 256 (357)
Q Consensus 184 ~~nv~~~~~~pq---~~lL~h~~~~~~ith---gG~~-s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~ 256 (357)
.+++...++++. ..++ .++++++.. .|.+ ++.||+++|+|+|.-...+ ....+.+.+.|..... .
T Consensus 256 ~~~v~~~g~~~~~~~~~~~--~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~----~~e~~~~~~~g~~~~~-~- 327 (381)
T COG0438 256 EDNVKFLGYVPDEELAELL--ASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGG----IPEVVEDGETGLLVPP-G- 327 (381)
T ss_pred CCcEEEecccCHHHHHHHH--HhCCEEEeccccccchHHHHHHHhcCCcEEECCCCC----hHHHhcCCCceEecCC-C-
Confidence 367777888883 2344 335666665 3443 4699999999998775431 1222222223552221 1
Q ss_pred CHHHHHHHHHHHhcCc
Q psy2178 257 NEEIIFNALKLVLEDP 272 (357)
Q Consensus 257 ~~~~l~~~i~~~l~~~ 272 (357)
..+++..++..++++.
T Consensus 328 ~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 328 DVEELADALEQLLEDP 343 (381)
T ss_pred CHHHHHHHHHHHhcCH
Confidence 6789999999998876
No 198
>PLN02727 NAD kinase
Probab=49.30 E-value=98 Score=33.33 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=39.5
Q ss_pred ccceEEEeeCchhhHHHHHhc----CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCc
Q psy2178 202 PKVKLFIMQGGLQSLQEAFHY----GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDP 272 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~ 272 (357)
..++++|+=||-||++.|+.. ++|++++-.. .+|- ..++..+++.+.|.+++++.
T Consensus 742 ~~~DLVIvLGGDGTlLrAar~~~~~~iPILGINlG-------------rLGF---LTdi~~ee~~~~L~~Il~G~ 800 (986)
T PLN02727 742 ERVDFVACLGGDGVILHASNLFRGAVPPVVSFNLG-------------SLGF---LTSHYFEDFRQDLRQVIHGN 800 (986)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEeCC-------------Cccc---cccCCHHHHHHHHHHHHcCC
Confidence 368999999999999999763 6888887431 1121 12466788888888888653
No 199
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=47.10 E-value=84 Score=29.22 Aligned_cols=68 Identities=12% Similarity=0.039 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhc----CceEEe
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHY----GVKLIC 228 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~----GvP~i~ 228 (357)
.+.++.+.+.|++.+. .+........ ..+.. . .. ...- ..++++|+-||-||+++++.. ++|+++
T Consensus 18 ~~~~~~i~~~L~~~g~-~v~v~~~~~~--~~~~~----~-~~-~~~~--~~~d~vi~~GGDGT~l~~~~~~~~~~~pv~g 86 (305)
T PRK02645 18 KEAAERCAKQLEARGC-KVLMGPSGPK--DNPYP----V-FL-ASAS--ELIDLAIVLGGDGTVLAAARHLAPHDIPILS 86 (305)
T ss_pred HHHHHHHHHHHHHCCC-EEEEecCchh--hcccc----c-hh-hccc--cCcCEEEEECCcHHHHHHHHHhccCCCCEEE
Confidence 4567778888887776 7554322111 00100 0 11 1111 358999999999999999863 789998
Q ss_pred ecC
Q psy2178 229 IPM 231 (357)
Q Consensus 229 ~P~ 231 (357)
+..
T Consensus 87 in~ 89 (305)
T PRK02645 87 VNV 89 (305)
T ss_pred Eec
Confidence 854
No 200
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=45.03 E-value=23 Score=31.85 Aligned_cols=29 Identities=14% Similarity=0.275 Sum_probs=24.1
Q ss_pred cceEEEeeCchhhHHHHHhc----CceEEeecC
Q psy2178 203 KVKLFIMQGGLQSLQEAFHY----GVKLICIPM 231 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~~----GvP~i~~P~ 231 (357)
.++++|+-||-||++.|+.. ++|++++-.
T Consensus 25 ~~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~ 57 (246)
T PRK04761 25 EADVIVALGGDGFMLQTLHRYMNSGKPVYGMNR 57 (246)
T ss_pred cCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeC
Confidence 47999999999999988654 689998843
No 201
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=44.97 E-value=48 Score=27.68 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=25.3
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEE
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVL 172 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~vi 172 (357)
.+|+++||... .+.+.++..++++.+.+.++++
T Consensus 3 ~vyl~LGSNlg---d~~~~l~~A~~~L~~~~~~~v~ 35 (160)
T COG0801 3 RVYLGLGSNLG---DRLKQLRAALAALDALADIRVV 35 (160)
T ss_pred EEEEEecCCCC---CHHHHHHHHHHHHHhCCCceEE
Confidence 59999999987 4566688888888888763433
No 202
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=44.06 E-value=2.9e+02 Score=26.28 Aligned_cols=126 Identities=15% Similarity=0.275 Sum_probs=78.7
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEE--EcCCc------c----CC-CC-CcEEE-eecCChh---h
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWK--WENDV------M----EG-LG-ENIRL-QKWMPQQ---D 197 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~--~~~~~------~----~~-~~-~nv~~-~~~~pq~---~ 197 (357)
+-+.|-.|-.+..+.---+.++.+.+-+.+ . ++|+.- ++++. + .+ .+ +++.+ .+++|.+ .
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~-~-~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~ 261 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGD-D-VKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLA 261 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCC-C-eEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHH
Confidence 446777777765443333444444432221 2 366653 34321 0 01 23 57754 5688875 5
Q ss_pred hhcCccceEEEee----CchhhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHh
Q psy2178 198 ILAHPKVKLFIMQ----GGLQSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVL 269 (357)
Q Consensus 198 lL~h~~~~~~ith----gG~~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l 269 (357)
+|+ +|++.|.. =|.|++.-.+..|+|+..- .+...-+.+.+.|+-+....++++...+.++=+++.
T Consensus 262 lL~--~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 262 LLS--RCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred HHH--hCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHh
Confidence 774 47665544 5899999999999999875 333344667778887777767899999998888775
No 203
>COG0391 Uncharacterized conserved protein [Function unknown]
Probab=43.90 E-value=1.9e+02 Score=27.15 Aligned_cols=63 Identities=11% Similarity=0.179 Sum_probs=44.0
Q ss_pred CCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEE
Q psy2178 105 QRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKW 175 (357)
Q Consensus 105 ~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~ 175 (357)
..+|.++||.. +.+.++.+++..+. + +|+++-||...+ -+|.=.+..+.+++++... +++...
T Consensus 166 v~~V~~~~~~~---~~a~~eaveAI~~A-D--~IviGPgSl~TS-IlP~Lllp~I~eaLr~~~a-p~i~v~ 228 (323)
T COG0391 166 VHRVRLEGPEK---PSAAPEAVEAIKEA-D--LIVIGPGSLFTS-ILPILLLPGIAEALRETVA-PIVYVC 228 (323)
T ss_pred ceEEEEecCCC---CCCCHHHHHHHHhC-C--EEEEcCCccHhh-hchhhchhHHHHHHHhCCC-CEEEec
Confidence 34577777332 44556667775443 3 799999999864 3677888999999999766 666543
No 204
>KOG0853|consensus
Probab=43.43 E-value=8.3 Score=38.16 Aligned_cols=63 Identities=16% Similarity=0.112 Sum_probs=40.8
Q ss_pred hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcchhhcccc
Q psy2178 214 QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQVFKSGWM 280 (357)
Q Consensus 214 ~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 280 (357)
-++.||+++|.|+++.=-.+ =+.-+++.-.|..++...-....+.+++.++..|++++.++.+
T Consensus 380 iv~IEAMa~glPvvAt~~GG----P~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~ 442 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNGG----PAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGK 442 (495)
T ss_pred ceeHHHHhcCCCEEEecCCC----ceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 37899999999999873221 0122223334666654222223799999999999998766544
No 205
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=43.40 E-value=2.1e+02 Score=27.00 Aligned_cols=32 Identities=16% Similarity=0.235 Sum_probs=26.7
Q ss_pred hhcCccceEEEeeCchhh---HHHHHhcCceEEee
Q psy2178 198 ILAHPKVKLFIMQGGLQS---LQEAFHYGVKLICI 229 (357)
Q Consensus 198 lL~h~~~~~~ithgG~~s---~~eal~~GvP~i~~ 229 (357)
++..-+-++++++||.-| .+.|...|+|.++.
T Consensus 86 i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 86 RIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 355556789999999986 89999999999876
No 206
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=43.17 E-value=95 Score=28.67 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=51.9
Q ss_pred EEeCccccCCCC--CCchHHHHHhccC-CCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccC-CCC
Q psy2178 109 VEVGPLHLVDPK--PLDESLQKWMDGA-PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME-GLG 184 (357)
Q Consensus 109 ~~vG~l~~~~~~--~l~~~~~~~l~~~-~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~-~~~ 184 (357)
.++|....++.. ..-.|++....+. -+++-+-....... -....+..+.+++++++. .|++.++..... ...
T Consensus 99 rf~~~~~v~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~~~~---~~~~~~~pi~~~a~~~gv-pv~ihtG~~~~~~~~~ 174 (293)
T COG2159 99 RFVGFARVDPRDPEAAAEELERRVRELGFVGVKLHPVAQGFY---PDDPRLYPIYEAAEELGV-PVVIHTGAGPGGAGLE 174 (293)
T ss_pred ceeeeeeeCCCchHHHHHHHHHHHHhcCceEEEecccccCCC---CCChHHHHHHHHHHHcCC-CEEEEeCCCCCCcccc
Confidence 355555554422 2234566666553 23322222222222 234447889999999998 888876653221 111
Q ss_pred CcEEEeecCChhhhhcCccceEEEeeCch
Q psy2178 185 ENIRLQKWMPQQDILAHPKVKLFIMQGGL 213 (357)
Q Consensus 185 ~nv~~~~~~pq~~lL~h~~~~~~ithgG~ 213 (357)
.- +..+..=..-.-.+|++++++.|+|.
T Consensus 175 ~~-~~~p~~~~~va~~fP~l~IVl~H~G~ 202 (293)
T COG2159 175 KG-HSDPLYLDDVARKFPELKIVLGHMGE 202 (293)
T ss_pred cC-CCCchHHHHHHHHCCCCcEEEEecCC
Confidence 00 01111112223456999999999994
No 207
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=42.79 E-value=17 Score=30.65 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=23.6
Q ss_pred cCccceEEEeeCchhhHHHHHhcCceEEeecCCC
Q psy2178 200 AHPKVKLFIMQGGLQSLQEAFHYGVKLICIPMFA 233 (357)
Q Consensus 200 ~h~~~~~~ithgG~~s~~eal~~GvP~i~~P~~~ 233 (357)
.+..++++|++||....+.... ++|++-+|.-+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4578999999999988888877 99999998754
No 208
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=42.39 E-value=53 Score=26.10 Aligned_cols=39 Identities=21% Similarity=0.472 Sum_probs=27.1
Q ss_pred CceEEEecCCccccCCCcHHHHHHHHHHHH-hCCCceEEEEEc
Q psy2178 135 EGVIYFSLGTNMKGTSMGDFRRKAFLKAFA-RLPQYRVLWKWE 176 (357)
Q Consensus 135 ~~vv~vs~GS~~~~~~~~~~~~~~i~~al~-~~~~~~viw~~~ 176 (357)
+++++++|||... -..+.+..+.+.++ +.+.+.|-|.+-
T Consensus 1 ~aillv~fGS~~~---~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 1 KAILLVSFGTSYP---TAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred CeEEEEeCCCCCH---HHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 3689999999975 23566777888874 456656666653
No 209
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=41.81 E-value=2.2e+02 Score=24.16 Aligned_cols=112 Identities=15% Similarity=0.053 Sum_probs=60.1
Q ss_pred HHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCC----cc-CCCCCcEEEeecCC-hhhh
Q psy2178 125 SLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWEND----VM-EGLGENIRLQKWMP-QQDI 198 (357)
Q Consensus 125 ~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~----~~-~~~~~nv~~~~~~p-q~~l 198 (357)
++-++|.+ ++..+|+-|.. ..++.++.++..+.+. +++=..... +. ........+.+-+. ...+
T Consensus 23 ~lG~~la~--~g~~lV~GGg~-------~GlM~a~a~ga~~~gG-~viGi~p~~l~~~~~~~~~~~~~i~~~~~~~Rk~~ 92 (178)
T TIGR00730 23 ELGAYLAG--QGWGLVYGGGR-------VGLMGAIADAAMENGG-TAVGVNPSGLFSGEVVHQNLTELIEVNGMHERKAM 92 (178)
T ss_pred HHHHHHHH--CCCEEEECCCh-------HhHHHHHHHHHHhcCC-eEEEecchhhhhhhccCCCCCceEEECCHHHHHHH
Confidence 35556655 45667776653 3456677788777777 655433221 11 11123344444443 3345
Q ss_pred hcCccceEE-EeeCchhhHHHHHh---------cCceEEeecC--CCChHH-HHHHHHHhce
Q psy2178 199 LAHPKVKLF-IMQGGLQSLQEAFH---------YGVKLICIPM--FADQDL-NCQRVGKIKT 247 (357)
Q Consensus 199 L~h~~~~~~-ithgG~~s~~eal~---------~GvP~i~~P~--~~dQ~~-na~~v~~~G~ 247 (357)
|.. .+++| +--||.||+.|... +.+|++++=. +.|... ..+.+.+.|.
T Consensus 93 m~~-~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 93 MAE-LADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred HHH-hCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 543 35554 45588899988743 4889888732 334333 2345555553
No 210
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=41.75 E-value=3.4e+02 Score=26.75 Aligned_cols=75 Identities=13% Similarity=0.239 Sum_probs=45.8
Q ss_pred EeecCChhhhhc-CccceEEEe---eCch-hhHHHHHhcCce----EEeecCCCChHHHHHHHHHhceeeeeeccCCCHH
Q psy2178 189 LQKWMPQQDILA-HPKVKLFIM---QGGL-QSLQEAFHYGVK----LICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEE 259 (357)
Q Consensus 189 ~~~~~pq~~lL~-h~~~~~~it---hgG~-~s~~eal~~GvP----~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~ 259 (357)
+.+++++.++.+ ...+++|+. +-|. .++.||+++|+| +|+--..+- . +...-|..++. -+.+
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~-~------~~~~~g~lv~p--~d~~ 415 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA-A------EELSGALLVNP--YDID 415 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccc-h------hhcCCCEEECC--CCHH
Confidence 345677765421 145788774 3454 467999999999 444322211 0 01123555553 3688
Q ss_pred HHHHHHHHHhcCc
Q psy2178 260 IIFNALKLVLEDP 272 (357)
Q Consensus 260 ~l~~~i~~~l~~~ 272 (357)
++.++|.++++++
T Consensus 416 ~la~ai~~~l~~~ 428 (460)
T cd03788 416 EVADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999865
No 211
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=36.71 E-value=49 Score=31.37 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=57.0
Q ss_pred CcEEEeecCChhhhhcCccceEEEee---Cchh-hHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHH
Q psy2178 185 ENIRLQKWMPQQDILAHPKVKLFIMQ---GGLQ-SLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEI 260 (357)
Q Consensus 185 ~nv~~~~~~pq~~lL~h~~~~~~ith---gG~~-s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~ 260 (357)
....+.+-.+-.+.|+. .+|++|+| .|.| ...|+++.|=|+| .|+..+.+ +|..-+ +.+..+
T Consensus 253 gkasfegR~~~p~fla~-~tD~VvSHqWeN~lNYlY~daLyggYPLV---------HNS~~l~d--~GYYY~--~fD~~~ 318 (364)
T PF10933_consen 253 GKASFEGRFDFPDFLAQ-HTDAVVSHQWENPLNYLYYDALYGGYPLV---------HNSPLLKD--VGYYYP--DFDAFE 318 (364)
T ss_pred CeeEEeeecChHHHHHh-CCCEEEeccccchhhHHHHHHHhcCCCcc---------cCcchhcc--cCcCCC--CccHHH
Confidence 44556666777777764 69999999 4555 4589999999997 58888776 566554 334443
Q ss_pred HHHHHHHHh----cC-cchhhccccchhhh
Q psy2178 261 IFNALKLVL----ED-PQVFKSGWMSLQKW 285 (357)
Q Consensus 261 l~~~i~~~l----~~-~~~~~~a~~l~~~~ 285 (357)
=.+++.+++ .+ +.|+++|+++-..+
T Consensus 319 G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~ 348 (364)
T PF10933_consen 319 GARQLLRAIREHDADLDAYRARARRLLDRL 348 (364)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhh
Confidence 333333333 22 57888888765443
No 212
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=35.25 E-value=1.5e+02 Score=23.58 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=36.8
Q ss_pred HHHHHHHHhCCCceEEEEEcCCccC-C-----CCCcEEEeecCC-hhhhhcCccceEEEeeCchhhHHHHHhc-------
Q psy2178 157 KAFLKAFARLPQYRVLWKWENDVME-G-----LGENIRLQKWMP-QQDILAHPKVKLFIMQGGLQSLQEAFHY------- 222 (357)
Q Consensus 157 ~~i~~al~~~~~~~viw~~~~~~~~-~-----~~~nv~~~~~~p-q~~lL~h~~~~~~ithgG~~s~~eal~~------- 222 (357)
+++.++..+.+. +++=.......+ . .-......+.+. ...+|...+-..++.-||.||+.|....
T Consensus 2 ~a~~~ga~~~gG-~viGi~p~~~~~~~~~~~~~~~~~~~~~~~~~Rk~~m~~~sda~I~lPGG~GTl~El~~~~~~~~l~ 80 (133)
T PF03641_consen 2 GAVAKGAKEAGG-RVIGIIPEFLFPFEEPPNPYVTELIIVDDMFERKEIMIESSDAFIALPGGIGTLDELFEALTLMQLG 80 (133)
T ss_dssp HHHHHHHHHTTT-TEEEEEETTGTTTTTTCCTTSSEEEEESSHHHHHHHHHHHESEEEEES-SHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHcCC-eEEEEecCccccccccCCcccCceeEeCChHHHHHHHHHhCCEEEEEecCCchHHHHHHHHHHHhhc
Confidence 355666667776 665444332221 1 112233444333 3445443333455667889999886532
Q ss_pred ---CceEEee
Q psy2178 223 ---GVKLICI 229 (357)
Q Consensus 223 ---GvP~i~~ 229 (357)
.+|++++
T Consensus 81 ~~~~~Piil~ 90 (133)
T PF03641_consen 81 RHNKVPIILL 90 (133)
T ss_dssp SSTS-EEEEE
T ss_pred cccCCCEEEe
Confidence 3387777
No 213
>PRK06270 homoserine dehydrogenase; Provisional
Probab=33.05 E-value=1e+02 Score=29.08 Aligned_cols=58 Identities=10% Similarity=0.140 Sum_probs=35.7
Q ss_pred ChhhhhcCccceEEEe------eCc---hhhHHHHHhcCceEEee---cCCCChHHHHHHHHHhceeeee
Q psy2178 194 PQQDILAHPKVKLFIM------QGG---LQSLQEAFHYGVKLICI---PMFADQDLNCQRVGKIKTGIVL 251 (357)
Q Consensus 194 pq~~lL~h~~~~~~it------hgG---~~s~~eal~~GvP~i~~---P~~~dQ~~na~~v~~~G~g~~l 251 (357)
.-.++|.++.++++|- |+| ..-+.+|+.+|+++++- |+...-..-.+...+.|+....
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKNGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHcCCEEEE
Confidence 4467777777887776 443 45668999999999994 7643222222333345554443
No 214
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=32.82 E-value=3.8e+02 Score=25.59 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=58.5
Q ss_pred cceEEEeeCchhhHHHHHhc-----------------CceEEeecCCCChHHHHHHHHHhceeee-eec---cCCCHHHH
Q psy2178 203 KVKLFIMQGGLQSLQEAFHY-----------------GVKLICIPMFADQDLNCQRVGKIKTGIV-LEY---EDLNEEII 261 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~~-----------------GvP~i~~P~~~dQ~~na~~v~~~G~g~~-l~~---~~~~~~~l 261 (357)
....++|.||..+.+-|+.+ +.|.+.++-.++ +...+.+.-.|+|+. +.. ..++.+++
T Consensus 103 ~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH-~S~~Kaa~~lGlg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 103 DAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAH-YSIEKAARILGLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp TSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHHTTSEEEEE-BBTTSSB-HHHH
T ss_pred CCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccc-cHHHHhcceeeeEEEEecCCcchhhhHHHh
Confidence 37889999998888776532 356777765553 444444455788854 222 24667778
Q ss_pred HHHHHHHhcCcchhhccccchhhhccCCCcc-eEEEEeecccccCcCchHHHHHHHHHHccCCCceEEEeec
Q psy2178 262 FNALKLVLEDPQVFKSGWMSLQKWMDGAPEG-VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWE 332 (357)
Q Consensus 262 ~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~-vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v~wk~~ 332 (357)
.++|++.. +++... ++.-+.||...|+-.+-. ++.+..++ |+++.-.|
T Consensus 182 ~~~l~~~~-----------------~~g~~p~~vvat~Gtt~~Ga~D~l~---~i~~i~~~---~~~wlHVD 230 (373)
T PF00282_consen 182 EKALEKDI-----------------ANGKTPFAVVATAGTTNTGAIDPLE---EIADICEK---YNIWLHVD 230 (373)
T ss_dssp HHHHHHHH-----------------HTTEEEEEEEEEBS-TTTSBB-SHH---HHHHHHHH---CT-EEEEE
T ss_pred hhhhcccc-----------------cccccceeeeccCCCcccccccCHH---HHhhhccc---cceeeeec
Confidence 88777654 222222 455688887766543332 34333333 45544445
No 215
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=31.80 E-value=2.8e+02 Score=26.04 Aligned_cols=140 Identities=17% Similarity=0.042 Sum_probs=68.0
Q ss_pred chHHHHHhccCC-CceEEEecCCc---cccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCc--cCCCCCcEEE-eecCCh
Q psy2178 123 DESLQKWMDGAP-EGVIYFSLGTN---MKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDV--MEGLGENIRL-QKWMPQ 195 (357)
Q Consensus 123 ~~~~~~~l~~~~-~~vv~vs~GS~---~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~--~~~~~~nv~~-~~~~pq 195 (357)
+++..+=|.-.+ .+.|++-+=+. ....+-..+.+..+++-|.+.+. ++.-..+.+ ..+.-+|+.+ .+-++.
T Consensus 169 d~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~gi--V~ipr~~~~~eife~~~n~i~pk~~vD~ 246 (346)
T COG1817 169 DPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYGI--VLIPREKEQAEIFEGYRNIIIPKKAVDT 246 (346)
T ss_pred CHHHHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhCcE--EEecCchhHHHHHhhhccccCCcccccH
Confidence 344444344432 45666655443 22222233446667777776652 222221111 1111223322 234555
Q ss_pred hhhhcCccceEEEeeCchhhHHHHHhcCceEEee-cCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhcCcc
Q psy2178 196 QDILAHPKVKLFIMQGGLQSLQEAFHYGVKLICI-PMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLEDPQ 273 (357)
Q Consensus 196 ~~lL~h~~~~~~ithgG~~s~~eal~~GvP~i~~-P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~ 273 (357)
.++|-. ++++|+-| ...--||+.-|+|.|.+ |- .-...-+.+.+.|. ... ..++.++-+.+.+.|.++.
T Consensus 247 l~Llyy--a~lvig~g-gTMarEaAlLGtpaIs~~pG--kll~vdk~lie~G~--~~~--s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 247 LSLLYY--ATLVIGAG-GTMAREAALLGTPAISCYPG--KLLAVDKYLIEKGL--LYH--STDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred HHHHhh--hheeecCC-chHHHHHHHhCCceEEecCC--ccccccHHHHhcCc--eee--cCCHHHHHHHHHHHhhchh
Confidence 667754 77888754 45668999999999987 42 11111244455553 333 1233344444445554443
No 216
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=31.41 E-value=97 Score=23.98 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhCCCceEEEEEcCCccC----CCCCcEEEee-------cCChhhhhcC-ccceEEEeeCchhhHHHH
Q psy2178 154 FRRKAFLKAFARLPQYRVLWKWENDVME----GLGENIRLQK-------WMPQQDILAH-PKVKLFIMQGGLQSLQEA 219 (357)
Q Consensus 154 ~~~~~i~~al~~~~~~~viw~~~~~~~~----~~~~nv~~~~-------~~pq~~lL~h-~~~~~~ithgG~~s~~ea 219 (357)
+....+++++++++. +++......+.. ...+..+..+ |+..+.++.- .+..+...|+|++-+.|.
T Consensus 12 eia~r~~ra~r~~Gi-~tv~v~s~~d~~s~~~~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~g~~~i~pGyg~lse~ 88 (110)
T PF00289_consen 12 EIAVRIIRALRELGI-ETVAVNSNPDTVSTHVDMADEAYFEPPGPSPESYLNIEAIIDIARKEGADAIHPGYGFLSEN 88 (110)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEEEGGGTTGHHHHHSSEEEEEESSSGGGTTTSHHHHHHHHHHTTESEEESTSSTTTTH
T ss_pred HHHHHHHHHHHHhCC-cceeccCchhcccccccccccceecCcchhhhhhccHHHHhhHhhhhcCcccccccchhHHH
Confidence 345678999999998 888777654321 2345555554 5655544421 123677889999888776
No 217
>PF08756 YfkB: YfkB-like domain; InterPro: IPR014866 YfkB is adjacent to YfkA in Bacillus subtilis. In other bacterial species, it is fused to this protein. As YfkA contains a Radical SAM domain it suggests this domain is interacts with them.
Probab=30.79 E-value=2.2e+02 Score=23.12 Aligned_cols=55 Identities=20% Similarity=0.191 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHHHHhcCcchhhccccchhhhccCCCcceEEEEeecccccCcCchHHHHHHHHHHccCCCceE
Q psy2178 255 DLNEEIIFNALKLVLEDPQVFKSGWMSLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRV 327 (357)
Q Consensus 255 ~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~vi~~slgs~~~g~s~~~~~~~~f~~~~~~lp~~~v 327 (357)
.++-+++.++|+++|+ .++.-+|+=|||..==.=..+..-.++++.+.+-|.+.|
T Consensus 12 vLsL~e~r~aIh~LLd------------------~Rd~~~WMLFGTLPfy~Cs~~eeD~~Ll~RL~~~~NVTv 66 (153)
T PF08756_consen 12 VLSLDEMREAIHRLLD------------------IRDPNVWMLFGTLPFYPCSDDEEDLALLKRLRSEPNVTV 66 (153)
T ss_pred cCCHHHHHHHHHHHHh------------------ccCCCeeEEecccccccCCCCHHHHHHHHHHHhCCCCee
Confidence 4678899999999983 233446888887532111123344589999999996554
No 218
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=30.58 E-value=1.9e+02 Score=27.46 Aligned_cols=80 Identities=11% Similarity=0.228 Sum_probs=47.3
Q ss_pred HHHHHHHhCC-CceEEEEEcCCcc--CCCCCcEEEeecCChhhhhcCccceEEEe------eCchhhHHHHHhcCceEEe
Q psy2178 158 AFLKAFARLP-QYRVLWKWENDVM--EGLGENIRLQKWMPQQDILAHPKVKLFIM------QGGLQSLQEAFHYGVKLIC 228 (357)
Q Consensus 158 ~i~~al~~~~-~~~viw~~~~~~~--~~~~~nv~~~~~~pq~~lL~h~~~~~~it------hgG~~s~~eal~~GvP~i~ 228 (357)
..++++.+.+ .++++..++.+.. ....+..-+..|-...+++..+.++++.+ +-+.--+.+|+.+|++++|
T Consensus 16 ~h~~al~~~~~~~eLvaV~d~~~erA~~~A~~~gi~~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~ 95 (343)
T TIGR01761 16 FYLAAFAAAPERFELAGILAQGSERSRALAHRLGVPLYCEVEELPDDIDIACVVVRSAIVGGQGSALARALLARGIHVLQ 95 (343)
T ss_pred HHHHHHHhCCCCcEEEEEEcCCHHHHHHHHHHhCCCccCCHHHHhcCCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEE
Confidence 3456666665 4467666654321 11111111123556678887777777765 2334677889999999999
Q ss_pred e-cCCCChHH
Q psy2178 229 I-PMFADQDL 237 (357)
Q Consensus 229 ~-P~~~dQ~~ 237 (357)
= |+..++-.
T Consensus 96 EKPla~~Ea~ 105 (343)
T TIGR01761 96 EHPLHPRDIQ 105 (343)
T ss_pred cCCCCHHHHH
Confidence 7 88643333
No 219
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=30.04 E-value=81 Score=28.65 Aligned_cols=40 Identities=23% Similarity=0.355 Sum_probs=24.5
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHh-CCCceEEEEEcC
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFAR-LPQYRVLWKWEN 177 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~-~~~~~viw~~~~ 177 (357)
.++++||||.... -....+..+.+.+++ .|.+.|.|.+..
T Consensus 2 AIllvsFGTs~~~--ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPE--AREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CC--CCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHH--HHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 5899999999762 223367777777754 477789998765
No 220
>PLN02470 acetolactate synthase
Probab=29.93 E-value=66 Score=32.85 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=52.7
Q ss_pred ecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccC----CC--CCcEEEeecCChh--hh-------hcCccce
Q psy2178 141 SLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVME----GL--GENIRLQKWMPQQ--DI-------LAHPKVK 205 (357)
Q Consensus 141 s~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~----~~--~~nv~~~~~~pq~--~l-------L~h~~~~ 205 (357)
+|||....+ .+...-+.+++.|++.+. +.++.+.++... .+ .+++..+.- .++ .. ..+.+..
T Consensus 2 ~~~~~~~~~-~~~~~a~~l~~~L~~~GV-~~vFg~pG~~~~~l~dal~~~~~i~~i~~-rhE~~A~~~Adgyar~tg~~g 78 (585)
T PLN02470 2 TFQSRFAPD-EPRKGADILVEALEREGV-DTVFAYPGGASMEIHQALTRSNCIRNVLC-RHEQGEVFAAEGYAKASGKVG 78 (585)
T ss_pred CcccCCCCC-ccccHHHHHHHHHHHcCC-CEEEEcCCcccHHHHHHHhccCCceEEEe-ccHHHHHHHHHHHHHHhCCCE
Confidence 466666543 233446778888888887 777777665321 11 123333221 121 11 1234577
Q ss_pred EEEeeCch------hhHHHHHhcCceEEeec
Q psy2178 206 LFIMQGGL------QSLQEAFHYGVKLICIP 230 (357)
Q Consensus 206 ~~ithgG~------~s~~eal~~GvP~i~~P 230 (357)
++++|.|- +.+.+|...++|+|++.
T Consensus 79 v~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 79 VCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred EEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 88888774 47789999999999994
No 221
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=29.28 E-value=22 Score=22.93 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=16.7
Q ss_pred CCCCCeEeecCCChhhhhCC
Q psy2178 338 GLGENIRLQKWMPQQDILGT 357 (357)
Q Consensus 338 ~~~~n~~~~~w~pQ~~~l~~ 357 (357)
.++.-|.+..|-|..|||+.
T Consensus 9 ~l~~~v~~~~w~P~mdLiA~ 28 (47)
T PF12894_consen 9 NLPSRVSCMSWCPTMDLIAL 28 (47)
T ss_pred CCCCcEEEEEECCCCCEEEE
Confidence 45677999999999999863
No 222
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=28.81 E-value=2.3e+02 Score=24.22 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=19.2
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEE
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWK 174 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~ 174 (357)
++++-+|+.. ...+.+++++++. .+.+.
T Consensus 2 i~vid~g~gn---------~~~~~~~l~~~g~-~v~~~ 29 (199)
T PRK13181 2 IAIIDYGAGN---------LRSVANALKRLGV-EAVVS 29 (199)
T ss_pred EEEEeCCCCh---------HHHHHHHHHHCCC-cEEEE
Confidence 5677788764 3556778888887 66554
No 223
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=28.05 E-value=65 Score=29.22 Aligned_cols=28 Identities=18% Similarity=0.236 Sum_probs=23.9
Q ss_pred cceEEEeeCchhhHHHHHh----cCceEEeec
Q psy2178 203 KVKLFIMQGGLQSLQEAFH----YGVKLICIP 230 (357)
Q Consensus 203 ~~~~~ithgG~~s~~eal~----~GvP~i~~P 230 (357)
.++++|+=||-||++.|+. .++|++++-
T Consensus 33 ~~D~vi~iGGDGT~L~a~~~~~~~~iPilGIN 64 (259)
T PRK00561 33 GADYLFVLGGDGFFVSTAANYNCAGCKVVGIN 64 (259)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCcEEEEe
Confidence 4799999999999998875 578999884
No 224
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=27.40 E-value=1.1e+02 Score=28.09 Aligned_cols=52 Identities=25% Similarity=0.407 Sum_probs=36.9
Q ss_pred ccceEEEeeCchhhHHHHHh----cCceEEeecCCCChHHHHHHHHHhc-eeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 202 PKVKLFIMQGGLQSLQEAFH----YGVKLICIPMFADQDLNCQRVGKIK-TGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal~----~GvP~i~~P~~~dQ~~na~~v~~~G-~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
..+++++.=||-||++.+.. .++|++++= .| +|-.. ++..+++.+.+.++++
T Consensus 54 ~~~d~ivvlGGDGtlL~~~~~~~~~~~pilgin--------------~G~lGFLt---~~~~~~~~~~~~~~~~ 110 (281)
T COG0061 54 EKADLIVVLGGDGTLLRAARLLARLDIPVLGIN--------------LGHLGFLT---DFEPDELEKALDALLE 110 (281)
T ss_pred cCceEEEEeCCcHHHHHHHHHhccCCCCEEEEe--------------CCCccccc---ccCHHHHHHHHHHHhc
Confidence 45899999999999999875 446888772 22 23222 4457788888888877
No 225
>PF14350 Beta_protein: Beta protein
Probab=26.75 E-value=1.9e+02 Score=27.19 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=28.1
Q ss_pred ceEEeecCCCChHHHHHHHH---HhceeeeeeccCCCHHHHHHHHHHHh
Q psy2178 224 VKLICIPMFADQDLNCQRVG---KIKTGIVLEYEDLNEEIIFNALKLVL 269 (357)
Q Consensus 224 vP~i~~P~~~dQ~~na~~v~---~~G~g~~l~~~~~~~~~l~~~i~~~l 269 (357)
+|++.+--..+.......+. ..|+++++...++..+++...|.+++
T Consensus 98 iPVi~l~~~~~~~~~v~~~~~~~~~~iaiRl~~~~~~~~~~~~~i~~i~ 146 (347)
T PF14350_consen 98 IPVIGLDRSDDYLRAVRSIARRNGGGIAIRLRPDDLDDDDFPSEISRIL 146 (347)
T ss_pred EEEEecCCcHHHHHHHHHHHHhcCCeEEEEeecccccchhHHHHHHHHH
Confidence 46666544433333334343 35777888777776677777787776
No 226
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=26.02 E-value=4.3e+02 Score=22.82 Aligned_cols=59 Identities=15% Similarity=0.057 Sum_probs=36.7
Q ss_pred eEEeCccccCCCCCCchHHHHHhccC---CCceEEEecCCccccCCCcHHHHHHHHHHHHhC-CCceEE
Q psy2178 108 LVEVGPLHLVDPKPLDESLQKWMDGA---PEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARL-PQYRVL 172 (357)
Q Consensus 108 v~~vG~l~~~~~~~l~~~~~~~l~~~---~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~-~~~~vi 172 (357)
+..+|+-..+......+.+.+++... ...++||...|.. ..+....+.++++++ +. .+.
T Consensus 2 l~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~-----~~~~~~~~~~a~~~l~G~-~~~ 64 (212)
T cd03146 2 LLLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGD-----RDEYTARFYAAFESLRGV-EVS 64 (212)
T ss_pred EEEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCC-----HHHHHHHHHHHHhhccCc-EEE
Confidence 34455444321122344566666654 3568888877763 467888899999998 76 554
No 227
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=25.77 E-value=1.7e+02 Score=24.21 Aligned_cols=135 Identities=10% Similarity=0.016 Sum_probs=63.5
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhH
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSL 216 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~ 216 (357)
.|.|-+||... ....++..+.|++++. .+-..+-.. .+.|+. +.+++ .-+.+..+++||+-.|...-
T Consensus 2 ~V~Ii~gs~SD-----~~~~~~a~~~L~~~gi-~~~~~V~sa--HR~p~~--l~~~~---~~~~~~~~~viIa~AG~~a~ 68 (150)
T PF00731_consen 2 KVAIIMGSTSD-----LPIAEEAAKTLEEFGI-PYEVRVASA--HRTPER--LLEFV---KEYEARGADVIIAVAGMSAA 68 (150)
T ss_dssp EEEEEESSGGG-----HHHHHHHHHHHHHTT--EEEEEE--T--TTSHHH--HHHHH---HHTTTTTESEEEEEEESS--
T ss_pred eEEEEeCCHHH-----HHHHHHHHHHHHHcCC-CEEEEEEec--cCCHHH--HHHHH---HHhccCCCEEEEEECCCccc
Confidence 46777788763 6778889999999875 443332220 011100 00111 11222357889998886544
Q ss_pred HHHHh---cCceEEeecCCCChHHHH---HHHHH--hceeeeee-ccCCCHHHHHHHHHHHh--cCcchhhccccchhhh
Q psy2178 217 QEAFH---YGVKLICIPMFADQDLNC---QRVGK--IKTGIVLE-YEDLNEEIIFNALKLVL--EDPQVFKSGWMSLQKW 285 (357)
Q Consensus 217 ~eal~---~GvP~i~~P~~~dQ~~na---~~v~~--~G~g~~l~-~~~~~~~~l~~~i~~~l--~~~~~~~~a~~l~~~~ 285 (357)
+-.+. .-.|+|++|....+.... ..+.. .|+++..- .+ +...-....-+++ .|++++++.+...+..
T Consensus 69 Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~--~~~nAA~~A~~ILa~~d~~l~~kl~~~~~~~ 146 (150)
T PF00731_consen 69 LPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGIN--NGFNAALLAARILALKDPELREKLRAYREKM 146 (150)
T ss_dssp HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SST--HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH
T ss_pred chhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEcc--CchHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 44333 369999999876543222 22333 36654432 11 1222222222333 4666666666555444
Q ss_pred c
Q psy2178 286 M 286 (357)
Q Consensus 286 ~ 286 (357)
+
T Consensus 147 ~ 147 (150)
T PF00731_consen 147 K 147 (150)
T ss_dssp H
T ss_pred H
Confidence 3
No 228
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=24.90 E-value=5.1e+02 Score=23.25 Aligned_cols=94 Identities=17% Similarity=0.280 Sum_probs=54.7
Q ss_pred hHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc--CCC-CCcEEE-eecCCh---h
Q psy2178 124 ESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM--EGL-GENIRL-QKWMPQ---Q 196 (357)
Q Consensus 124 ~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~--~~~-~~nv~~-~~~~pq---~ 196 (357)
++..+++.+.+.+.|+++.||.. +..+.. ....+. +++..+=+... ..+ +.++.. .+-+.. .
T Consensus 119 ~eA~~~l~~~~~~~iflttGsk~---------L~~f~~-~~~~~~-r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~ 187 (249)
T PF02571_consen 119 EEAAELLKELGGGRIFLTTGSKN---------LPPFVP-APLPGE-RLFARVLPTPESALGFPPKNIIAMQGPFSKELNR 187 (249)
T ss_pred HHHHHHHhhcCCCCEEEeCchhh---------HHHHhh-cccCCC-EEEEEECCCccccCCCChhhEEEEeCCCCHHHHH
Confidence 45566665544456999999875 233333 233445 77776644221 122 334332 222222 3
Q ss_pred hhhcCccceEEEee--CchhhH----HHHHhcCceEEee
Q psy2178 197 DILAHPKVKLFIMQ--GGLQSL----QEAFHYGVKLICI 229 (357)
Q Consensus 197 ~lL~h~~~~~~ith--gG~~s~----~eal~~GvP~i~~ 229 (357)
.++.+=+++++||. ||. .+ ..|...|+|++++
T Consensus 188 al~~~~~i~~lVtK~SG~~-g~~eKi~AA~~lgi~vivI 225 (249)
T PF02571_consen 188 ALFRQYGIDVLVTKESGGS-GFDEKIEAARELGIPVIVI 225 (249)
T ss_pred HHHHHcCCCEEEEcCCCch-hhHHHHHHHHHcCCeEEEE
Confidence 57777789999998 555 33 3477789999988
No 229
>KOG0129|consensus
Probab=24.84 E-value=1.2e+02 Score=30.11 Aligned_cols=54 Identities=26% Similarity=0.425 Sum_probs=40.8
Q ss_pred eEEEEcCCCccccCCCCCC-CeEEeCccccCCCCCC-chHHHHHhccCCCceEEEecCCc
Q psy2178 88 SFMFSFDSRITGYARPMQR-KLVEVGPLHLVDPKPL-DESLQKWMDGAPEGVIYFSLGTN 145 (357)
Q Consensus 88 ~~~l~~s~~~l~~~~~~~p-~v~~vG~l~~~~~~~l-~~~~~~~l~~~~~~vv~vs~GS~ 145 (357)
..++.++++.++..+++.| +++|||+++- +| -+||..+++.-=.+|+|+..-|-
T Consensus 351 PW~laDs~fv~d~sq~lDprrTVFVGgvpr----pl~A~eLA~imd~lyGgV~yaGIDtD 406 (520)
T KOG0129|consen 351 PWVLADSDFVLDHNQPIDPRRTVFVGGLPR----PLTAEELAMIMEDLFGGVLYVGIDTD 406 (520)
T ss_pred eeEeccchhhhccCcccCccceEEecCCCC----cchHHHHHHHHHHhcCceEEEEeccC
Confidence 4577788888888788755 7999999973 33 35688888865467999987666
No 230
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=24.29 E-value=1.1e+02 Score=27.94 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=25.1
Q ss_pred ceEEEEeecccccCcCchHHHHHHHHHH-ccCCCceEEEeecCCc
Q psy2178 292 GVIYFSLGTNMKGTSMGDFRRKAFLKAF-ARLPQYRVLWKWENDV 335 (357)
Q Consensus 292 ~vi~~slgs~~~g~s~~~~~~~~f~~~~-~~lp~~~v~wk~~~~~ 335 (357)
+++.++|||......... .+.+.+.+ +.+|++.|.|-|....
T Consensus 2 AIllvsFGTs~~~ar~~t--i~~ie~~~~~~fp~~~V~~AfTS~~ 44 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKT--IDAIEKAVREAFPDYDVRRAFTSRI 44 (262)
T ss_dssp EEEEEE---S-CCCCHHH--HHHHHHHHHHCSTTSEEEEEES-HH
T ss_pred EEEEEeCCCCCHHHHHHH--HHHHHHHHHHHCCCCcEEEEchHHH
Confidence 577889998655432212 33666666 6789999999998753
No 231
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=23.28 E-value=2.9e+02 Score=29.16 Aligned_cols=80 Identities=14% Similarity=0.183 Sum_probs=45.2
Q ss_pred EEeecCChhhhhc-CccceEEEee---Cch-hhHHHHHhcCceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHH
Q psy2178 188 RLQKWMPQQDILA-HPKVKLFIMQ---GGL-QSLQEAFHYGVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIF 262 (357)
Q Consensus 188 ~~~~~~pq~~lL~-h~~~~~~ith---gG~-~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~ 262 (357)
++..++++.++.+ ...+++|+.- -|. ..+.|++++|+|-.+.|+..+ ++--..+..-|+.++. -+.+++.
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~---~~G~~~~l~~~llv~P--~d~~~la 419 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSE---MAGAAAELAEALLVNP--NDIEGIA 419 (726)
T ss_pred EEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEec---ccchhHHhCcCeEECC--CCHHHHH
Confidence 4556788775432 1557888764 354 477999999665222222111 1111112112666654 3588899
Q ss_pred HHHHHHhcCc
Q psy2178 263 NALKLVLEDP 272 (357)
Q Consensus 263 ~~i~~~l~~~ 272 (357)
++|.++++.+
T Consensus 420 ~ai~~~l~~~ 429 (726)
T PRK14501 420 AAIKRALEMP 429 (726)
T ss_pred HHHHHHHcCC
Confidence 9999988753
No 232
>PRK13057 putative lipid kinase; Reviewed
Probab=23.27 E-value=91 Score=28.49 Aligned_cols=30 Identities=33% Similarity=0.481 Sum_probs=24.7
Q ss_pred ccceEEEeeCchhhHHHHH----hcCceEEeecC
Q psy2178 202 PKVKLFIMQGGLQSLQEAF----HYGVKLICIPM 231 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal----~~GvP~i~~P~ 231 (357)
+..+.+|.-||-||+.|++ ..++|+-++|.
T Consensus 49 ~~~d~iiv~GGDGTv~~v~~~l~~~~~~lgiiP~ 82 (287)
T PRK13057 49 DGVDLVIVGGGDGTLNAAAPALVETGLPLGILPL 82 (287)
T ss_pred cCCCEEEEECchHHHHHHHHHHhcCCCcEEEECC
Confidence 4578999999999998875 35689889996
No 233
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=22.94 E-value=88 Score=28.65 Aligned_cols=53 Identities=23% Similarity=0.281 Sum_probs=36.1
Q ss_pred ccceEEEeeCchhhHHHHHhc----CceEEeecCCCChHHHHHHHHHhceeeeeeccCCCHHHHHHHHHHHhc
Q psy2178 202 PKVKLFIMQGGLQSLQEAFHY----GVKLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNEEIIFNALKLVLE 270 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal~~----GvP~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~~l~~~i~~~l~ 270 (357)
..++++|+-||-||++.+... ++|+++++... .|+ ..+++.+++.+++.+++.
T Consensus 75 ~~~D~ii~lGGDGT~L~~~~~~~~~~~Pilgin~G~-----------lgf-----l~~~~~~~~~~~l~~~~~ 131 (285)
T PF01513_consen 75 EGVDLIIVLGGDGTFLRAARLFGDYDIPILGINTGT-----------LGF-----LTEFEPEDIEEALEKILA 131 (285)
T ss_dssp CCSSEEEEEESHHHHHHHHHHCTTST-EEEEEESSS-----------STS-----SSSEEGCGHHHHHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHhccCCCcEEeecCCC-----------ccc-----cccCCHHHHHHHHHHHhc
Confidence 679999999999999998762 68999996421 111 113345666777777765
No 234
>PLN02880 tyrosine decarboxylase
Probab=22.56 E-value=7e+02 Score=24.87 Aligned_cols=64 Identities=11% Similarity=-0.009 Sum_probs=36.2
Q ss_pred ceEEEeeCchhhHHHHHhcCc--------------eEEeecCCCChHHHHHHHHH-hceee----eeec-----cCCCHH
Q psy2178 204 VKLFIMQGGLQSLQEAFHYGV--------------KLICIPMFADQDLNCQRVGK-IKTGI----VLEY-----EDLNEE 259 (357)
Q Consensus 204 ~~~~ithgG~~s~~eal~~Gv--------------P~i~~P~~~dQ~~na~~v~~-~G~g~----~l~~-----~~~~~~ 259 (357)
...+++.||..+.+.|+.... +++.++-.. +.-..+... .|+|. .+.. ..++.+
T Consensus 147 ~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a--H~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~ 224 (490)
T PLN02880 147 GGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT--HSALQKACQIAGIHPENCRLLKTDSSTNYALAPE 224 (490)
T ss_pred CceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc--hHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHH
Confidence 567889998888877764432 222222222 233333434 68872 2322 146788
Q ss_pred HHHHHHHHHh
Q psy2178 260 IIFNALKLVL 269 (357)
Q Consensus 260 ~l~~~i~~~l 269 (357)
.|.++|++..
T Consensus 225 ~L~~~i~~~~ 234 (490)
T PLN02880 225 LLSEAISTDL 234 (490)
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 235
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism]
Probab=22.47 E-value=2.5e+02 Score=24.44 Aligned_cols=88 Identities=18% Similarity=0.207 Sum_probs=51.8
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEee---cCChhhhhcCccceEEEeeCch
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQK---WMPQQDILAHPKVKLFIMQGGL 213 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~---~~pq~~lL~h~~~~~~ithgG~ 213 (357)
|+.|-.|+-- +..+.+|+++.+. .+.++-..+.+.. .+.+.+-+ +-.-++-|.. .|..
T Consensus 4 i~IIDyg~GN---------L~Sv~~Aler~G~-~~~vs~d~~~i~~-AD~liLPGVGaf~~am~~L~~--------~gl~ 64 (204)
T COG0118 4 VAIIDYGSGN---------LRSVKKALERLGA-EVVVSRDPEEILK-ADKLILPGVGAFGAAMANLRE--------RGLI 64 (204)
T ss_pred EEEEEcCcch---------HHHHHHHHHHcCC-eeEEecCHHHHhh-CCEEEecCCCCHHHHHHHHHh--------cchH
Confidence 5566666543 6778899999998 8887655443221 23333311 1112333321 2566
Q ss_pred hhHHHHHhcCceEEeecCCCChHHHHHHHHH
Q psy2178 214 QSLQEAFHYGVKLICIPMFADQDLNCQRVGK 244 (357)
Q Consensus 214 ~s~~eal~~GvP~i~~P~~~dQ~~na~~v~~ 244 (357)
..+.|++..|+|++++-+ +-|.....-.|.
T Consensus 65 ~~i~~~~~~~kP~LGICl-GMQlLfe~SeE~ 94 (204)
T COG0118 65 EAIKEAVESGKPFLGICL-GMQLLFERSEEG 94 (204)
T ss_pred HHHHHHHhcCCCEEEEeH-hHHhhhhccccc
Confidence 788888999999999854 445554444433
No 236
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=22.45 E-value=3.1e+02 Score=22.85 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=45.3
Q ss_pred eeEEEEcCCCc-ccc----CCCCCCCeEEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHH
Q psy2178 87 DSFMFSFDSRI-TGY----ARPMQRKLVEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLK 161 (357)
Q Consensus 87 ~~~~l~~s~~~-l~~----~~~~~p~v~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~ 161 (357)
..+.|+.+.++ ++. -+..-|++..+|..+..-.....+++.+.+.....-+|+|++|+-.+ +.... +
T Consensus 47 ~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~PkQ-----E~~~~---~ 118 (171)
T cd06533 47 LRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVGLGAPKQ-----ELWIA---R 118 (171)
T ss_pred CeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHH-----HHHHH---H
Confidence 45666666554 332 23345677777744322122223446777777766799999998643 23222 2
Q ss_pred HHHhCCCceEEEEEcC
Q psy2178 162 AFARLPQYRVLWKWEN 177 (357)
Q Consensus 162 al~~~~~~~viw~~~~ 177 (357)
....++. .++..+++
T Consensus 119 ~~~~l~~-~v~~~vG~ 133 (171)
T cd06533 119 HKDRLPV-PVAIGVGG 133 (171)
T ss_pred HHHHCCC-CEEEEece
Confidence 3333455 66666665
No 237
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=22.09 E-value=5.4e+02 Score=25.74 Aligned_cols=138 Identities=11% Similarity=0.083 Sum_probs=77.5
Q ss_pred eEEEecCCccccCCCcHHHHHHHHHHHHhCCCc----eEEEEEcCCc--------c----C-------------CCCCcE
Q psy2178 137 VIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQY----RVLWKWENDV--------M----E-------------GLGENI 187 (357)
Q Consensus 137 vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~----~viw~~~~~~--------~----~-------------~~~~nv 187 (357)
.|.++-|-.-..+ --...+.++-+.|++.|.+ .++-...+.. + . +..+-+
T Consensus 286 kiIl~VDRLDy~K-GI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~ 364 (487)
T TIGR02398 286 KLILSAERVDYTK-GILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQ 364 (487)
T ss_pred eEEEEeccccccc-CHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEE
Confidence 4778888776543 3456677777777777653 2332222210 0 0 112225
Q ss_pred EEeecCChhhhhc-CccceEEEee---CchhhH-HHHHhcCc----eEEeecCCCChHHHHHHHHHhceeeeeeccCCCH
Q psy2178 188 RLQKWMPQQDILA-HPKVKLFIMQ---GGLQSL-QEAFHYGV----KLICIPMFADQDLNCQRVGKIKTGIVLEYEDLNE 258 (357)
Q Consensus 188 ~~~~~~pq~~lL~-h~~~~~~ith---gG~~s~-~eal~~Gv----P~i~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~ 258 (357)
++...+|+.++.+ ...+++++.- -|+|-+ .|.++++. |+|.=-+. -| .+...-++.++ -.+.
T Consensus 365 ~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Ga--a~~l~~AllVN--P~d~ 435 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GA--AVELKGALLTN--PYDP 435 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cc--hhhcCCCEEEC--CCCH
Confidence 6667788876443 2456766654 588755 59988877 44432221 11 13333356665 3468
Q ss_pred HHHHHHHHHHhcCcc--hhhccccchhh
Q psy2178 259 EIIFNALKLVLEDPQ--VFKSGWMSLQK 284 (357)
Q Consensus 259 ~~l~~~i~~~l~~~~--~~~~a~~l~~~ 284 (357)
+++.++|.+.|+.+. -+++.+++.+.
T Consensus 436 ~~~A~ai~~AL~m~~~Er~~R~~~l~~~ 463 (487)
T TIGR02398 436 VRMDETIYVALAMPKAEQQARMREMFDA 463 (487)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999999997653 33444444433
No 238
>PRK11579 putative oxidoreductase; Provisional
Probab=22.06 E-value=6.5e+02 Score=23.47 Aligned_cols=87 Identities=14% Similarity=0.177 Sum_probs=52.0
Q ss_pred ceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEEEcCCcc--C-CCCCcEEEeecCChhhhhcCccceEEEeeCc
Q psy2178 136 GVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWKWENDVM--E-GLGENIRLQKWMPQQDILAHPKVKLFIMQGG 212 (357)
Q Consensus 136 ~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~~~~~~~--~-~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG 212 (357)
.+-+|..|.+.. ...+.++...+.++++..+..+.- . ..+ ... -+-...++|.++.+++++..--
T Consensus 6 rvgiiG~G~i~~---------~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~-~~~--~~~~~~ell~~~~vD~V~I~tp 73 (346)
T PRK11579 6 RVGLIGYGYASK---------TFHAPLIAGTPGLELAAVSSSDATKVKADWP-TVT--VVSEPQHLFNDPNIDLIVIPTP 73 (346)
T ss_pred eEEEECCCHHHH---------HHHHHHHhhCCCCEEEEEECCCHHHHHhhCC-CCc--eeCCHHHHhcCCCCCEEEEcCC
Confidence 366677777642 112445555555477766654321 1 111 111 2345678898888888776443
Q ss_pred ----hhhHHHHHhcCceEEee-cCCCC
Q psy2178 213 ----LQSLQEAFHYGVKLICI-PMFAD 234 (357)
Q Consensus 213 ----~~s~~eal~~GvP~i~~-P~~~d 234 (357)
.-.+.+|+.+|++++|= |+..+
T Consensus 74 ~~~H~~~~~~al~aGkhVl~EKPla~t 100 (346)
T PRK11579 74 NDTHFPLAKAALEAGKHVVVDKPFTVT 100 (346)
T ss_pred cHHHHHHHHHHHHCCCeEEEeCCCCCC
Confidence 24567899999999987 87654
No 239
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=21.80 E-value=4.7e+02 Score=24.74 Aligned_cols=74 Identities=15% Similarity=0.107 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCceEEEEEcCCccCCCCCcEEEeecCCh-------------h--------------hhh-cC-ccc
Q psy2178 154 FRRKAFLKAFARLPQYRVLWKWENDVMEGLGENIRLQKWMPQ-------------Q--------------DIL-AH-PKV 204 (357)
Q Consensus 154 ~~~~~i~~al~~~~~~~viw~~~~~~~~~~~~nv~~~~~~pq-------------~--------------~lL-~h-~~~ 204 (357)
.+++.++++|.+.|. .|...+..+... .+.++.+..+-+. . .-+ .+ -+-
T Consensus 11 ~~~~~la~~L~~~G~-~v~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 88 (396)
T cd03818 11 GQFRHLAPALAAQGH-EVVFLTEPNAAP-PPGGVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAKGFRP 88 (396)
T ss_pred hhHHHHHHHHHHCCC-EEEEEecCCCCC-CCCCeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 446789999999887 877766554321 1124555444322 0 001 11 136
Q ss_pred eEEEeeCchhhHHHH--HhcCceEEee
Q psy2178 205 KLFIMQGGLQSLQEA--FHYGVKLICI 229 (357)
Q Consensus 205 ~~~ithgG~~s~~ea--l~~GvP~i~~ 229 (357)
+++++|.|++...-. +.-++|+++.
T Consensus 89 dvi~~h~~~~~~~~l~~~~~~~~~v~~ 115 (396)
T cd03818 89 DVIVAHPGWGETLFLKDVWPDAPLIGY 115 (396)
T ss_pred CEEEECCccchhhhHHHhCCCCCEEEE
Confidence 899999998755433 2346888874
No 240
>PRK13059 putative lipid kinase; Reviewed
Probab=21.72 E-value=94 Score=28.58 Aligned_cols=31 Identities=13% Similarity=0.286 Sum_probs=24.6
Q ss_pred ccceEEEeeCchhhHHHHH---h---cCceEEeecCC
Q psy2178 202 PKVKLFIMQGGLQSLQEAF---H---YGVKLICIPMF 232 (357)
Q Consensus 202 ~~~~~~ithgG~~s~~eal---~---~GvP~i~~P~~ 232 (357)
...+++|.-||-||+.|++ . .++|+-++|..
T Consensus 55 ~~~d~vi~~GGDGTv~evv~gl~~~~~~~~lgviP~G 91 (295)
T PRK13059 55 ESYKYILIAGGDGTVDNVVNAMKKLNIDLPIGILPVG 91 (295)
T ss_pred cCCCEEEEECCccHHHHHHHHHHhcCCCCcEEEECCC
Confidence 4578999999999998875 2 35888889963
No 241
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=20.55 E-value=3.6e+02 Score=19.91 Aligned_cols=65 Identities=15% Similarity=-0.019 Sum_probs=38.2
Q ss_pred EEeCccccCCCCCCchHHHHHhccCCCceEEEecCCccccCCCcHHHHHHHHHHHHhCCCceEEEE
Q psy2178 109 VEVGPLHLVDPKPLDESLQKWMDGAPEGVIYFSLGTNMKGTSMGDFRRKAFLKAFARLPQYRVLWK 174 (357)
Q Consensus 109 ~~vG~l~~~~~~~l~~~~~~~l~~~~~~vv~vs~GS~~~~~~~~~~~~~~i~~al~~~~~~~viw~ 174 (357)
..-|.+.......+.+.+.+..+......|.+.+......+...-..+..+.+.+++.+. ++.+.
T Consensus 17 ~~~G~l~~~~~~~~~~~l~~~~~~~~~~~vvidls~v~~iDssgl~~L~~~~~~~~~~~~-~~~l~ 81 (108)
T TIGR00377 17 RLSGELDAHTAPLLREKVTPAAERTGPRPIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGG-QLVLV 81 (108)
T ss_pred EEecccccccHHHHHHHHHHHHHhcCCCeEEEECCCCeEEccccHHHHHHHHHHHHhcCC-EEEEE
Confidence 344555543333445556665553334458888887776555556667777777776666 65543
No 242
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=20.19 E-value=97 Score=28.28 Aligned_cols=67 Identities=9% Similarity=0.108 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHhCCCceEEEEE-cCC-ccCCCCCcEEEeecCChhhhhcCccceEEEeeCchhhHHHHHhc-----Cce
Q psy2178 153 DFRRKAFLKAFARLPQYRVLWKW-END-VMEGLGENIRLQKWMPQQDILAHPKVKLFIMQGGLQSLQEAFHY-----GVK 225 (357)
Q Consensus 153 ~~~~~~i~~al~~~~~~~viw~~-~~~-~~~~~~~nv~~~~~~pq~~lL~h~~~~~~ithgG~~s~~eal~~-----GvP 225 (357)
.+..+.+.+.|.+.+. .+.... ... ... ..+. .... ...+++|+-||-||+.|++.. ..|
T Consensus 18 ~~~~~~i~~~l~~~~~-~~~~~~t~~~~~~~---------~~~~--~~~~-~~~d~ivv~GGDGTl~~v~~~l~~~~~~~ 84 (293)
T TIGR00147 18 NKPLREVIMLLREEGM-EIHVRVTWEKGDAA---------RYVE--EARK-FGVDTVIAGGGDGTINEVVNALIQLDDIP 84 (293)
T ss_pred HHHHHHHHHHHHHCCC-EEEEEEecCcccHH---------HHHH--HHHh-cCCCEEEEECCCChHHHHHHHHhcCCCCC
Confidence 4556777788877765 544322 111 110 0011 1112 357899999999999996542 355
Q ss_pred EEe-ecCC
Q psy2178 226 LIC-IPMF 232 (357)
Q Consensus 226 ~i~-~P~~ 232 (357)
.++ +|..
T Consensus 85 ~lgiiP~G 92 (293)
T TIGR00147 85 ALGILPLG 92 (293)
T ss_pred cEEEEcCc
Confidence 565 7863
Done!