BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2181
(490 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270006382|gb|EFA02830.1| twin of eyeless [Tribolium castaneum]
Length = 524
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/163 (75%), Positives = 135/163 (82%), Gaps = 13/163 (7%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQASA N E+VYDKLRMFNGQ PGWAWYPG+ P+ HL L
Sbjct: 207 VSSINRVLRNLASQKEQQASAQN---ESVYDKLRMFNGQTPGWAWYPGT---PTAPHLGL 260
Query: 62 PHNPGSVTP-ISRDDAKE-----HESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFT 115
P P ++T I+RDD ++ HE+TSD NSE NSS DEDSQ+RLRLKRKLQRNRTSFT
Sbjct: 261 PPAPAALTTQIARDDLQKRADAMHENTSDGNSEHNSSGDEDSQLRLRLKRKLQRNRTSFT 320
Query: 116 NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 321 NEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 363
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 193/388 (49%), Gaps = 94/388 (24%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSET 180
EF+R P +FA R+RL + I VSSINRVLRNLA+QKEQQASA N E+
Sbjct: 176 EFKR-ECPSIFAWEIRDRLLSEGVCNNDNIPSVSSINRVLRNLASQKEQQASAQN---ES 231
Query: 181 VYDKLRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTP-ISRDDAKEFERTHYPDVF 238
VYDKLRMFNGQ PGWAWYPG TP+ HL LP P ++T I+RDD ++ + +
Sbjct: 232 VYDKLRMFNGQTPGWAWYPG---TPTAPHLGLPPAPAALTTQIARDDLQKRADAMHENTS 288
Query: 239 ARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA 298
+ G ++++++ ++ RN + +Q + + E +
Sbjct: 289 DGNSEHNSSGDEDSQLRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH------------- 335
Query: 299 WYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQ 358
YP V R K + ++ QVWFSNRRAKWRREEKLRNQ
Sbjct: 336 -YP------------------DVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQ 376
Query: 359 RRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS--RLPLNPGGFNPSSMYSSIPQPAGM 416
RR A+D V S PPSS RLP+N GFN SMYSSIPQP
Sbjct: 377 RR----------------AVDQVGAVS---PPSSAGRLPIN-SGFN--SMYSSIPQPIAT 414
Query: 417 --DSY-------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPA-----AHSS 462
D+Y + SCLQQ + Y YMFHD LHSL S+Y A A AH+
Sbjct: 415 MADTYSSMSGGLSSSCLQQ-----RDATGYPYMFHDPLHSLSSSYNSRATACNPAVAHTQ 469
Query: 463 PHPHPAHPGSSPYGTSNSVNGPPTSTGT 490
P HP+ Y ++ + P STGT
Sbjct: 470 PTTHPS------YASATTPTSVPASTGT 491
>gi|242006165|ref|XP_002423925.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
gi|212507188|gb|EEB11187.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
Length = 509
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/176 (69%), Positives = 133/176 (75%), Gaps = 27/176 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLAAQKEQ +SA N E+VYDKLRMFNGQ PGWAWYPG TPP + HL L
Sbjct: 180 VSSINRVLRNLAAQKEQ-SSAQN---ESVYDKLRMFNGQAPGWAWYPG-TPPTT--HLTL 232
Query: 62 PHNPGSVTP--ISRDDAKEH-----------------ESTSDINSEPNSSADEDSQMRLR 102
P NP + P +SRDD ++ E+TSD NSE SS DEDSQ+RLR
Sbjct: 233 PPNPTTTLPGQMSRDDLQKRAAGAGGGGGGDLGSHHGENTSDGNSEHGSSGDEDSQLRLR 292
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 293 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 348
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 84/167 (50%), Gaps = 41/167 (24%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR V P P PSSRLPLN
Sbjct: 342 QVWFSNRRAKWRREEKLRNQRR-------------------TVEPVVSPPTPSSRLPLNT 382
Query: 399 GGFNPSSMYSSIPQPAGM----------DSYNPSCLQQAAREHHHHSSYSYMFHDSLHSL 448
GFN SMY SIPQP S N SCLQQ SSY YMFHD LHSL
Sbjct: 383 -GFN--SMYGSIPQPIATMSESSMTSSLSSMNGSCLQQ----RDAASSYPYMFHDPLHSL 435
Query: 449 QSAYQRA-APAAHSSPHPHPAHPGS----SPYGTSNSVNGPPTSTGT 490
S Y + A A ++ + AH S S YGT S + P+ TG
Sbjct: 436 SSTYNHSRAAAVSAACNSAAAHQNSVNTHSSYGTVGSSSTGPSGTGV 482
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 70/104 (67%), Gaps = 14/104 (13%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLAAQKE Q+SA N E+VYDKLRM
Sbjct: 155 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLAAQKE-QSSAQN---ESVYDKLRM 210
Query: 188 FNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTP--ISRDDAKE 228
FNGQ PGWAWYPG+ PT HL LP NP + P +SRDD ++
Sbjct: 211 FNGQAPGWAWYPGTPPT---THLTLPPNPTTTLPGQMSRDDLQK 251
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 78/121 (64%), Gaps = 16/121 (13%)
Query: 217 SVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQ 272
+ TP+ A +++R P +FA R+RL + I VSSINRVLRNLAAQKE
Sbjct: 139 ATTPVVSKIA-DYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLAAQKE- 195
Query: 273 QASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTP--ISRDDA 329
Q+SA N E+VYDKLRMFNGQ PGWAWYPG+ PT HL LP NP + P +SRDD
Sbjct: 196 QSSAQN---ESVYDKLRMFNGQAPGWAWYPGTPPT---THLTLPPNPTTTLPGQMSRDDL 249
Query: 330 K 330
+
Sbjct: 250 Q 250
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 32/35 (91%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 314 KEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 348
>gi|321464778|gb|EFX75784.1| twin of eyeless [Daphnia pulex]
Length = 473
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/171 (69%), Positives = 129/171 (75%), Gaps = 18/171 (10%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLAAQKEQQ++A SE+VYDKLRMFNGQ G WAWYPG+ PP PA LAL
Sbjct: 136 VSSINRVLRNLAAQKEQQSAA--AASESVYDKLRMFNGQAGGWAWYPGAPPPTHPA-LAL 192
Query: 62 PHNPGSVTPI---------SRDDAKEHES----TSDINSEP-NSSADEDSQMRLRLKRKL 107
PH TP+ RDD + + SD NS+ NSS DED QMRLRLKRKL
Sbjct: 193 PHGHVPATPLPSGGGGHHLIRDDPHKRDCNDGNISDGNSDLHNSSGDEDPQMRLRLKRKL 252
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QRNRTSFTNEQI+SLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 253 QRNRTSFTNEQIESLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 303
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 127/267 (47%), Gaps = 54/267 (20%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLA 164
R TS +I ++E P +FA R+RL + I VSSINRVLRNLA
Sbjct: 93 RVATSCVVTKIADYKREC-----PSIFAWEIRDRLLSEGVCNNDTIPSVSSINRVLRNLA 147
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVTP--- 220
AQKEQQ++A SE+VYDKLRMFNGQ G WAWYPG+ P PA LALPH TP
Sbjct: 148 AQKEQQSAA--AASESVYDKLRMFNGQAGGWAWYPGAPPPTHPA-LALPHGHVPATPLPS 204
Query: 221 ------ISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQA 274
+ RDD + + L + G + ++++ ++ RN + +Q
Sbjct: 205 GGGGHHLIRDDPHKRDCNDGNISDGNSDLHNSSGDEDPQMRLRLKRKLQRNRTSFTNEQI 264
Query: 275 SAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQ 334
+ + E + YP V R K +
Sbjct: 265 ESLEKEFERTH--------------YP------------------DVFARERLAEKIGLP 292
Query: 335 QSARQVWFSNRRAKWRREEKLRNQRRG 361
++ QVWFSNRRAKWRREEKLRNQRRG
Sbjct: 293 EARIQVWFSNRRAKWRREEKLRNQRRG 319
>gi|195064095|ref|XP_001996496.1| GH23963 [Drosophila grimshawi]
gi|193892042|gb|EDV90908.1| GH23963 [Drosophila grimshawi]
Length = 545
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 133/175 (76%), Gaps = 25/175 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ GWAWYPG+T + AHLAL
Sbjct: 149 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPGNT---TTAHLAL 202
Query: 62 PHNPGSV-----TPISRDDAKE-------------HESTSDINSEPNSSADEDSQMRLRL 103
P P +V I+RD+ ++ HESTSD NS+ NSS DEDSQMRLRL
Sbjct: 203 PPTPTAVPTNLSGQITRDEVQKRDLYPGDLSHPNSHESTSDGNSDHNSSGDEDSQMRLRL 262
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 263 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 317
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 193/441 (43%), Gaps = 142/441 (32%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 124 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 180
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSV-----TPISRDDAKEFERTHYPDVF--- 238
FNGQ GWAWYPG+T T AHLALP P +V I+RD+ + +R YP
Sbjct: 181 FNGQTGGWAWYPGNTTT---AHLALPPTPTAVPTNLSGQITRDEVQ--KRDLYPGDLSHP 235
Query: 239 -ARERLAD------KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 291
+ E +D G ++++++ ++ RN + +Q + + E +
Sbjct: 236 NSHESTSDGNSDHNSSGDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH------ 289
Query: 292 NGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRR 351
YP V R K + ++ QVWFSNRRAKWRR
Sbjct: 290 --------YP------------------DVFARERLAEKIGLPEARIQVWFSNRRAKWRR 323
Query: 352 EEKLRNQRR------------------GSTGSVNSANTTTSTTAL--------------- 378
EEKLR QRR GS+ N+ ST+ +
Sbjct: 324 EEKLRTQRRSVDNVGGTSGRTSTNNPSGSSVPTNATTANNSTSGIGTSAGSEGASTVHAG 383
Query: 379 ------------------DHVPPTSQSPPPSS---RLPLNPGGFNPSSMYSSIPQPAG-- 415
+V S SPP + RLPLN GFN +MYSSIPQP
Sbjct: 384 NNNPNETSNGPTILGGDASNVHSNSDSPPLQAVAPRLPLNT-GFN--TMYSSIPQPIATM 440
Query: 416 ----------MDSYNPSCLQQAAREHHHHSSYSYMFHD--SLHSLQSAYQRAA----PAA 459
+ S P+CLQQ SY YMFHD SL S +A+ R AA
Sbjct: 441 AENYNSMTQSLSSMTPTCLQQ-------RDSYPYMFHDPLSLGSPYAAHPRNTACNPAAA 493
Query: 460 HSSPHPHPAHPGSSPYGTSNS 480
H P H + S GT+N+
Sbjct: 494 HQQPPQHGVYGNGSAVGTANT 514
>gi|195402191|ref|XP_002059690.1| GJ13300 [Drosophila virilis]
gi|194155904|gb|EDW71088.1| GJ13300 [Drosophila virilis]
gi|263359635|gb|ACY70471.1| hypothetical protein DVIR88_6g0008 [Drosophila virilis]
Length = 549
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/175 (69%), Positives = 133/175 (76%), Gaps = 25/175 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYPG+T + AHLAL
Sbjct: 149 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQSGGWAWYPGNT---TTAHLAL 202
Query: 62 PHNPGSV-----TPISRDDAKE-------------HESTSDINSEPNSSADEDSQMRLRL 103
P P +V I+RD+ ++ HESTSD NS+ NSS DEDSQMRLRL
Sbjct: 203 PPTPTAVPTNLSGQINRDEVQKRDLYPGDLSHPNSHESTSDGNSDHNSSGDEDSQMRLRL 262
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 263 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 317
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 199/446 (44%), Gaps = 148/446 (33%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 124 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 180
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSV-----TPISRDDAKEFERTHYPDVF--- 238
FNGQ GWAWYPG+T T AHLALP P +V I+RD+ + +R YP
Sbjct: 181 FNGQSGGWAWYPGNTTT---AHLALPPTPTAVPTNLSGQINRDEVQ--KRDLYPGDLSHP 235
Query: 239 -ARERLAD------KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 291
+ E +D G ++++++ ++ RN + +Q + + E +
Sbjct: 236 NSHESTSDGNSDHNSSGDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH------ 289
Query: 292 NGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRR 351
YP V R K + ++ QVWFSNRRAKWRR
Sbjct: 290 --------YP------------------DVFARERLAEKIGLPEARIQVWFSNRRAKWRR 323
Query: 352 EEKLRNQRR--------------------GSTGSVN--SANTTTSTTALDHVP------- 382
EEKLR QRR G+TG N +AN++T A V
Sbjct: 324 EEKLRTQRRSVDNVGGGGNSGRTSTNNPAGATGPANGTTANSSTPGIAGSAVSEGASAAH 383
Query: 383 --------------PT------------SQSPPPSS---RLPLNPGGFNPSSMYSSIPQP 413
PT S+SPP + RLPLN GFN +MYSSIPQP
Sbjct: 384 AGNNNNNLAESSNGPTIHGGDTGNAHTNSESPPLQAVAPRLPLN-SGFN--TMYSSIPQP 440
Query: 414 AGM--DSYN----------PSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQR------A 455
+SYN P+CLQQ SY YMFHD L SL S Y
Sbjct: 441 IATMAESYNSMTSSLSSMTPTCLQQ-------RDSYPYMFHDPL-SLGSPYASHPRNTAC 492
Query: 456 AP-AAHSSPHPHPAHPGSSPYGTSNS 480
P AAH P H + SS T+N+
Sbjct: 493 NPAAAHQQPPQHGVYGNSSAVSTANT 518
>gi|195134022|ref|XP_002011437.1| GI14042 [Drosophila mojavensis]
gi|193912060|gb|EDW10927.1| GI14042 [Drosophila mojavensis]
Length = 569
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 132/175 (75%), Gaps = 25/175 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ GWAWYPG+T + AHL L
Sbjct: 150 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQSGGWAWYPGNT---TTAHLTL 203
Query: 62 PHNPGSV-----TPISRDDAKE-------------HESTSDINSEPNSSADEDSQMRLRL 103
P P +V I+RD+ ++ HESTSD NS+ NSS DEDSQMRLRL
Sbjct: 204 PPTPTAVPTNLSGQITRDEIQKRELYPGDLSHPNSHESTSDGNSDHNSSGDEDSQMRLRL 263
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 264 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 318
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 16/109 (14%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 125 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 181
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSV-----TPISRDDAKEFE 230
FNGQ GWAWYPG+T T AHL LP P +V I+RD+ ++ E
Sbjct: 182 FNGQSGGWAWYPGNTTT---AHLTLPPTPTAVPTNLSGQITRDEIQKRE 227
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 18/124 (14%)
Query: 217 SVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
+ TP+ + A +++R P +FA R+RL ++++ + VSSINRVLRNLA+QKEQ
Sbjct: 109 ATTPVVQKIA-DYKR-ECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQ 166
Query: 273 QASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPTPSPAHLALPHNPGSV-----TPISR 326
QA N E+VY+KLRMFNGQ GWAWYPG+T T AHL LP P +V I+R
Sbjct: 167 QAQQQN---ESVYEKLRMFNGQSGGWAWYPGNTTT---AHLTLPPTPTAVPTNLSGQITR 220
Query: 327 DDAK 330
D+ +
Sbjct: 221 DEIQ 224
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 32/35 (91%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 284 KEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 318
>gi|383210367|dbj|BAM08280.1| twin of eyeless, partial [Gryllus bimaculatus]
Length = 213
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 123/153 (80%), Gaps = 17/153 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLAAQKEQQ +A N E+VYDKLRMFNGQ PGWAWYPG+ P+ HL L
Sbjct: 67 VSSINRVLRNLAAQKEQQVTAQN---ESVYDKLRMFNGQPPGWAWYPGA---PATPHLGL 120
Query: 62 PHN-PGSVTP--ISRDDAKEH-------ESTSDINSEPNSSADEDSQMRLRLKRKLQRNR 111
P N +V P ++RDDA++ E+TSD NSE NSS DEDSQ+RLRLKRKLQRNR
Sbjct: 121 PPNHAAAVLPGQVARDDAQKRAGDMVHGENTSDGNSEHNSSGDEDSQLRLRLKRKLQRNR 180
Query: 112 TSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
TSFTNEQIDSLEKEFERTHYPDVFARERLA+KI
Sbjct: 181 TSFTNEQIDSLEKEFERTHYPDVFARERLAEKI 213
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 14/105 (13%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLAAQKEQQ +A N E+VYDKLRM
Sbjct: 42 PSIFAWEIRDRLLSEAVCTNDNIPSVSSINRVLRNLAAQKEQQVTAQN---ESVYDKLRM 98
Query: 188 FNGQ-PGWAWYPGSTPTPSPAHLALPHN-PGSVTP--ISRDDAKE 228
FNGQ PGWAWYPG+ TP HL LP N +V P ++RDDA++
Sbjct: 99 FNGQPPGWAWYPGAPATP---HLGLPPNHAAAVLPGQVARDDAQK 140
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 70/104 (67%), Gaps = 14/104 (13%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL + I VSSINRVLRNLAAQKEQQ +A N E+VYDKLRM
Sbjct: 42 PSIFAWEIRDRLLSEAVCTNDNIPSVSSINRVLRNLAAQKEQQVTAQN---ESVYDKLRM 98
Query: 291 FNGQ-PGWAWYPGSTPTPSPAHLALPHN-PGSVTP--ISRDDAK 330
FNGQ PGWAWYPG+ TP HL LP N +V P ++RDDA+
Sbjct: 99 FNGQPPGWAWYPGAPATP---HLGLPPNHAAAVLPGQVARDDAQ 139
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 21/21 (100%)
Query: 227 KEFERTHYPDVFARERLADKI 247
KEFERTHYPDVFARERLA+KI
Sbjct: 193 KEFERTHYPDVFARERLAEKI 213
>gi|195564338|ref|XP_002105777.1| GD24416 [Drosophila simulans]
gi|194201653|gb|EDX15229.1| GD24416 [Drosophila simulans]
Length = 342
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 127/176 (72%), Gaps = 28/176 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ GWAWYP +T + AHL L
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNT---TTAHLTL 198
Query: 62 PHNPGSVTP-------ISRDDAKE--------------HESTSDINSEPNSSADEDSQMR 100
P VT RDD ++ H+STSD NSE NSS DEDSQMR
Sbjct: 199 PPAASVVTSPANLSGQADRDDVQKRELQFSIEVSHTNSHDSTSDGNSEHNSSGDEDSQMR 258
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
LRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV I
Sbjct: 259 LRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVCVI 314
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 13/104 (12%)
Query: 217 SVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQ 272
+ TP+ + A +++R P +FA R+RL + I VSSINRVLRNLA+QKEQ
Sbjct: 104 ATTPVVQKIA-DYKR-ECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQ 161
Query: 273 QASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPTPSPAHLALP 315
QA N E+VY+KLRMFNGQ GWAWYP +T T AHL LP
Sbjct: 162 QAQQQN---ESVYEKLRMFNGQTGGWAWYPSNTTT---AHLTLP 199
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/33 (93%), Positives = 31/33 (93%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
KEFERTHYPDVFARERLADKIGLPEARIQV I
Sbjct: 282 KEFERTHYPDVFARERLADKIGLPEARIQVCVI 314
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 18/111 (16%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTP-------ISRDDAKEFE 230
FNGQ GWAWYP +T T AHL LP VT RDD ++ E
Sbjct: 177 FNGQTGGWAWYPSNTTT---AHLTLPPAASVVTSPANLSGQADRDDVQKRE 224
>gi|194913445|ref|XP_001982698.1| GG16402 [Drosophila erecta]
gi|190647914|gb|EDV45217.1| GG16402 [Drosophila erecta]
Length = 543
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/236 (55%), Positives = 152/236 (64%), Gaps = 36/236 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP +T P HL L
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNTTTP---HLTL 198
Query: 62 PHNPGSVTP-------ISRDDAKE--------------HESTSDINSEPNSSADEDSQMR 100
P VT +RDD ++ H+STSD NSE NSS DEDSQMR
Sbjct: 199 PPAASVVTSPANLSGQANRDDGQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMR 258
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
LRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV NR
Sbjct: 259 LRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA 318
Query: 161 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
+ ++E++ ++++TV +G+P + P T S + NPG
Sbjct: 319 K---WRREEKMRTQRRSADTVDG-----SGRPSTSNNPSGTTASSSVATSNNSNPG 366
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 186/438 (42%), Gaps = 122/438 (27%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTP-------ISRDDAKEFERTHYPDVFA 239
FNGQ GWAWYP +T TP HL LP VT +RDD ++ E
Sbjct: 177 FNGQTGGWAWYPSNTTTP---HLTLPPAASVVTSPANLSGQANRDDGQKREL-------- 225
Query: 240 RERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW 299
+ ++VS N E +S + + K ++ Q
Sbjct: 226 -----------QFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKL---QRNRTS 271
Query: 300 YPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQR 359
+ H P D GL ++ QVWFSNRRAKWRREEK+R QR
Sbjct: 272 FSNEQIDSLEKEFERTHYPDVFARERLADKIGL-PEARIQVWFSNRRAKWRREEKMRTQR 330
Query: 360 R------------------GSTGSVNSANTTTSTTAL-----------------DHVPPT 384
R G+T S + A + S + + +P
Sbjct: 331 RSADTVDGSGRPSTSNNPSGTTASSSVATSNNSNPGIANSAIIVAERASSALISNSLPDA 390
Query: 385 SQSP--------------------PPSSRLPLNPGGFNPSSMYSSIPQP---------AG 415
S P P + RLPLN GFN +MYSSIPQP +
Sbjct: 391 SNGPTVLGGEANATHTSSESPPLQPATPRLPLN-SGFN--TMYSSIPQPIATMAENYNSS 447
Query: 416 MDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAH--SSPHPHPAHPGSS 473
+ S PSCLQQ +Y YMFHD L SL S Y PA H ++ +P AH
Sbjct: 448 LGSMTPSCLQQ-------RDAYPYMFHDPL-SLGSPY---VPAHHRNTACNPAAAHQQPP 496
Query: 474 PYGT-SNSVNGPPTSTGT 490
+G +NS P ++TG
Sbjct: 497 QHGVYTNSSAMPSSNTGV 514
>gi|45549245|ref|NP_524638.3| twin of eyeless, isoform A [Drosophila melanogaster]
gi|15291285|gb|AAK92911.1| GH14454p [Drosophila melanogaster]
gi|45444822|gb|AAF59395.4| twin of eyeless, isoform A [Drosophila melanogaster]
gi|220942324|gb|ACL83705.1| toy-PA [synthetic construct]
gi|220952546|gb|ACL88816.1| toy-PA [synthetic construct]
Length = 543
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/201 (60%), Positives = 140/201 (69%), Gaps = 31/201 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP +T + AHL L
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNT---TTAHLTL 198
Query: 62 PHNPGSVTP-------ISRDDAKE--------------HESTSDINSEPNSSADEDSQMR 100
P VT RDD ++ H+STSD NSE NSS DEDSQMR
Sbjct: 199 PPAASVVTSPANLSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMR 258
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
LRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV NR
Sbjct: 259 LRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA 318
Query: 161 RNLAAQKEQQASAHNQTSETV 181
+ ++E++ ++++TV
Sbjct: 319 K---WRREEKMRTQRRSADTV 336
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 181/426 (42%), Gaps = 110/426 (25%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADK 246
FNGQ GWAWYP +T T AHL LP VT A + DV RE
Sbjct: 177 FNGQTGGWAWYPSNTTT---AHLTLPPAASVVT----SPANLSGQADRDDVQKREL---- 225
Query: 247 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 306
+ ++VS N E +S + + K ++ Q +
Sbjct: 226 ----QFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKL---QRNRTSFSNEQID 278
Query: 307 PSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR------ 360
H P D GL ++ QVWFSNRRAKWRREEK+R QRR
Sbjct: 279 SLEKEFERTHYPDVFARERLADKIGL-PEARIQVWFSNRRAKWRREEKMRTQRRSADTVD 337
Query: 361 ------------GSTGS-----------------VNSANTTTSTTALDHVPPTSQSP--- 388
G+T S +N A T+S + +P S P
Sbjct: 338 GSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVSNSLPEASNGPTVL 397
Query: 389 -----------------PPSSRLPLNPGGFNPSSMYSSIPQP---------AGMDSYNPS 422
P + RLPLN GFN +MYSSIPQP + + S PS
Sbjct: 398 GGEANTTHTSSESPPLQPAAPRLPLN-SGFN--TMYSSIPQPIATMAENYNSSLGSMTPS 454
Query: 423 CLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA--------APAAHSSPHPHPAHPGSSP 474
CLQQ +Y YMFHD L SL S Y A AAH P H + SSP
Sbjct: 455 CLQQ-------RDAYPYMFHDPL-SLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSP 506
Query: 475 YGTSNS 480
+SN+
Sbjct: 507 MPSSNT 512
>gi|4883932|gb|AAD31712.1|AF134350_1 transcription factor Toy [Drosophila melanogaster]
Length = 543
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/201 (60%), Positives = 140/201 (69%), Gaps = 31/201 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP +T + AHL L
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNT---TTAHLTL 198
Query: 62 PHNPGSVTP-------ISRDDAKE--------------HESTSDINSEPNSSADEDSQMR 100
P VT RDD ++ H+STSD NSE NSS DEDSQMR
Sbjct: 199 PPAASVVTSPANLSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMR 258
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
LRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV NR
Sbjct: 259 LRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA 318
Query: 161 RNLAAQKEQQASAHNQTSETV 181
+ ++E++ ++++TV
Sbjct: 319 K---WRREEKMRTQRRSADTV 336
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 181/426 (42%), Gaps = 110/426 (25%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADK 246
FNGQ GWAWYP +T T AHL LP VT A + DV RE
Sbjct: 177 FNGQTGGWAWYPSNTTT---AHLTLPPAASVVT----SPANLSGQADRDDVQKREL---- 225
Query: 247 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 306
+ ++VS N E +S + + K ++ Q +
Sbjct: 226 ----QFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKL---QRNRTSFSNEQID 278
Query: 307 PSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR------ 360
H P D GL ++ QVWFSNRRAKWRREEK+R QRR
Sbjct: 279 SLEKEFERTHYPDVFARERLADKIGL-PEARIQVWFSNRRAKWRREEKMRTQRRSADTVD 337
Query: 361 ------------GSTGS-----------------VNSANTTTSTTALDHVPPTSQSP--- 388
G+T S +N A T+S + +P S P
Sbjct: 338 GSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALISNSLPEASNGPTVL 397
Query: 389 -----------------PPSSRLPLNPGGFNPSSMYSSIPQP---------AGMDSYNPS 422
P + RLPLN GFN +MYSSIPQP + + S PS
Sbjct: 398 GGEANTTHTSSESPPLQPSAPRLPLN-SGFN--TMYSSIPQPIATMAENYNSSLGSMTPS 454
Query: 423 CLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA--------APAAHSSPHPHPAHPGSSP 474
CLQQ +Y YMFHD L SL S Y A AAH P H + SSP
Sbjct: 455 CLQQ-------RDAYPYMFHDPL-SLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSP 506
Query: 475 YGTSNS 480
+SN+
Sbjct: 507 MPSSNT 512
>gi|195355670|ref|XP_002044313.1| GM13021 [Drosophila sechellia]
gi|194130600|gb|EDW52643.1| GM13021 [Drosophila sechellia]
Length = 543
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 152/238 (63%), Gaps = 36/238 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP +T + AHL L
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNT---TTAHLTL 198
Query: 62 PHNPGSVTP-------ISRDDAKE--------------HESTSDINSEPNSSADEDSQMR 100
P VT RDD ++ H+STSD NSE NSS DEDSQMR
Sbjct: 199 PPAASVVTSPANLSGQADRDDVQKRELQFSIEVSHTNSHDSTSDGNSEHNSSGDEDSQMR 258
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
LRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV NR
Sbjct: 259 LRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRA 318
Query: 161 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 218
+ ++E++ ++++TV +G+P A P T S + PG V
Sbjct: 319 K---WRREEKMRTQRRSADTVDG-----SGRPSTANNPSVTTASSSVATSNNSTPGIV 368
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 182/426 (42%), Gaps = 110/426 (25%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADK 246
FNGQ GWAWYP +T T AHL LP VT A + DV RE
Sbjct: 177 FNGQTGGWAWYPSNTTT---AHLTLPPAASVVT----SPANLSGQADRDDVQKREL---- 225
Query: 247 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 306
+ I+VS N E +S + + K ++ Q +
Sbjct: 226 ----QFSIEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKL---QRNRTSFSNEQID 278
Query: 307 PSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGS---- 362
H P D GL ++ QVWFSNRRAKWRREEK+R QRR +
Sbjct: 279 SLEKEFERTHYPDVFARERLADKIGL-PEARIQVWFSNRRAKWRREEKMRTQRRSADTVD 337
Query: 363 -TGSVNSANTTTSTTALDHVP-----------------------------------PT-- 384
+G ++AN + TTA V PT
Sbjct: 338 GSGRPSTANNPSVTTASSSVATSNNSTPGIVNSAINVAERASSALISNSLPEASNGPTVL 397
Query: 385 ----------SQSP---PPSSRLPLNPGGFNPSSMYSSIPQP---------AGMDSYNPS 422
S+SP P + RLPLN GFN +MY SIPQP + + S PS
Sbjct: 398 GGEANTTHTSSESPPLQPAAPRLPLN-SGFN--TMYPSIPQPIATMAENYNSSLGSMTPS 454
Query: 423 CLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA--------APAAHSSPHPHPAHPGSSP 474
CLQQ +Y YMFHD L SL S Y A AAH P H + SS
Sbjct: 455 CLQQ-------RDAYPYMFHDPL-SLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSS 506
Query: 475 YGTSNS 480
+SN+
Sbjct: 507 MPSSNT 512
>gi|195450696|ref|XP_002072593.1| GK13683 [Drosophila willistoni]
gi|194168678|gb|EDW83579.1| GK13683 [Drosophila willistoni]
Length = 552
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 132/177 (74%), Gaps = 27/177 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ GWAWYP +T + AHLAL
Sbjct: 146 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQSGGWAWYPSNT---TTAHLAL 199
Query: 62 PHNPGSVTP-------ISRDDAKE-------------HESTSDINSEPNSSADEDSQMRL 101
P P +V I+RDD ++ HESTSD NS+ NSS DEDSQMRL
Sbjct: 200 PPTPTAVPTPTNLSGQINRDDVQKRDLYPGDVSHPNSHESTSDGNSDHNSSGDEDSQMRL 259
Query: 102 RLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 260 RLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 316
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 202/453 (44%), Gaps = 147/453 (32%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 121 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 177
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTP-------ISRDDAKEFERTHYP-DVF 238
FNGQ GWAWYP +T T AHLALP P +V I+RDD + +R YP DV
Sbjct: 178 FNGQSGGWAWYPSNTTT---AHLALPPTPTAVPTPTNLSGQINRDDVQ--KRDLYPGDVS 232
Query: 239 ---ARERLAD------KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 289
+ E +D G ++++++ ++ RN + +Q + + E +
Sbjct: 233 HPNSHESTSDGNSDHNSSGDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH---- 288
Query: 290 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKW 349
YP V R K + ++ QVWFSNRRAKW
Sbjct: 289 ----------YP------------------DVFARERLAEKIGLPEARIQVWFSNRRAKW 320
Query: 350 RREEKLRNQRR-----GSTGSVNSAN------TTTSTTA--------------------- 377
RREEKLR QRR GS+G ++ N T+ STTA
Sbjct: 321 RREEKLRTQRRSVDNVGSSGRTSTNNNPNPSVTSVSTTAAPTGNGTPGLISSAAVNGSEE 380
Query: 378 -----------LDHVP--PT------------SQSPPPSS---RLPLNPGGFNPSSMYSS 409
L P PT S+SPP + RLPLN GFN +MYSS
Sbjct: 381 SSSAIVGGNNTLADSPNGPTILGGEANTAHGNSESPPLHAVAPRLPLNT-GFN--TMYSS 437
Query: 410 IPQPAG------------MDSYNPSCLQQAAREHHHHSSYSYMFHD--SLHSLQSAYQRA 455
IPQP + S PSCLQQ SY YMFHD SL S +A+ R
Sbjct: 438 IPQPIATMAENYNSMTSTLGSMTPSCLQQ-------RDSYPYMFHDPLSLGSPYAAHHRN 490
Query: 456 APAAHSSPHPHPAHPGSSPYGTSNSVNGPPTST 488
P S+ H P G YG S ++ T T
Sbjct: 491 TPCNPSAAHQQPPQHGGV-YGNSAAMTSSNTGT 522
>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
Length = 545
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/180 (66%), Positives = 131/180 (72%), Gaps = 32/180 (17%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP ++ + HLAL
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNS---TTTHLAL 198
Query: 62 PHNPGSVT---------PISRDDAKE--------------HESTSDINSEPNSSADEDSQ 98
P P S T PI+R+D ++ H+STSD S+ NSS DEDSQ
Sbjct: 199 P--PASATVATPTNLSGPINREDIQKRELQYSTDVSHTNSHDSTSDGISDHNSSCDEDSQ 256
Query: 99 MRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
MRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV NR
Sbjct: 257 MRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNR 316
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 184/420 (43%), Gaps = 131/420 (31%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVT---------PISRDDAKEFERTHYPDV 237
FNGQ G WAWYP ++ T HLALP P S T PI+R+D ++ E + DV
Sbjct: 177 FNGQTGGWAWYPSNSTT---THLALP--PASATVATPTNLSGPINREDIQKRELQYSTDV 231
Query: 238 F---ARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 294
+ + +D I + S R L +++ Q + + T+E + + F
Sbjct: 232 SHTNSHDSTSDGISDHNSSCDEDSQMR----LRLKRKLQRNRTSFTNEQIDSLEKEFERT 287
Query: 295 PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEK 354
H P D GL ++ QVWFSNRRAKWRREEK
Sbjct: 288 ---------------------HYPDVFARERLADKIGL-PEARIQVWFSNRRAKWRREEK 325
Query: 355 LRNQRRG----------------------------------------STGSVNSANTTTS 374
+R QRR ++GS ++ +
Sbjct: 326 MRTQRRSVDNIGNSSVRSSTVANNTSGGASSSVTTSNNSTPGIINSTASGSERPSSDVIT 385
Query: 375 TTALDHVP--------------PTSQSPPPSS---RLPLNPGGFNPSSMYSSIPQPAG-- 415
T L P +S+SPP S R+PLN G FN +MY SIPQP
Sbjct: 386 TNNLSETPNGPSVLGGDANSAHTSSESPPIQSVAPRIPLNTG-FN--TMYPSIPQPIATM 442
Query: 416 -------MDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPA 468
+ S P+CLQQ +Y YMFHD L SL S Y A H +P +PA
Sbjct: 443 AENYNSPLGSMTPTCLQQ-------RDAYPYMFHDPL-SLGSPY---ASTHHRNPTCNPA 491
>gi|328716918|ref|XP_003246075.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
pisum]
Length = 571
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 132/212 (62%), Gaps = 56/212 (26%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQ-------------------TSETVYDKLRMFNGQPG 43
VSSINRVLRNLAAQKE QAS+ +Q +E+VYDKLRMFNGQ G
Sbjct: 149 VSSINRVLRNLAAQKEHQASSTHQPGGGNGLSGGGGGIGGGGGAAESVYDKLRMFNGQTG 208
Query: 44 WAWYPGSTP--------------PPSPAHLALP----HNPGS-------------VTPIS 72
W WY P PSP H AL H+PG+ +T +S
Sbjct: 209 WPWYAAPPPPPPPSAGGPPVHGGAPSPHHPALVGSAGHHPGNPAAASLATATTASLTAVS 268
Query: 73 RDDAKEH------ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
RDD + ESTSD NSE NSSAD+DSQ+RLRLKRKLQRNRTSFTN+QIDSLEKEF
Sbjct: 269 RDDIQRRAAELAPESTSDGNSEHNSSADDDSQLRLRLKRKLQRNRTSFTNDQIDSLEKEF 328
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINR 158
ERTHYPDVFARERLAD I LPEARIQV NR
Sbjct: 329 ERTHYPDVFARERLADNISLPEARIQVWFSNR 360
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 25/106 (23%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
TN ++ + +++R P +FA R+RL + I VSSINRVLRNLAAQKE Q
Sbjct: 109 TNGVVNKI-ADYKR-ECPSIFAWEIRDRLLSEGVCSNDNIPSVSSINRVLRNLAAQKEHQ 166
Query: 171 ASAHNQ-------------------TSETVYDKLRMFNGQPGWAWY 197
AS+ +Q +E+VYDKLRMFNGQ GW WY
Sbjct: 167 ASSTHQPGGGNGLSGGGGGIGGGGGAAESVYDKLRMFNGQTGWPWY 212
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 50/89 (56%), Gaps = 23/89 (25%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQ----------- 279
P +FA R+RL + I VSSINRVLRNLAAQKE QAS+ +Q
Sbjct: 124 PSIFAWEIRDRLLSEGVCSNDNIPSVSSINRVLRNLAAQKEHQASSTHQPGGGNGLSGGG 183
Query: 280 --------TSETVYDKLRMFNGQPGWAWY 300
+E+VYDKLRMFNGQ GW WY
Sbjct: 184 GGIGGGGGAAESVYDKLRMFNGQTGWPWY 212
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLAD I LPEARIQV NR
Sbjct: 326 KEFERTHYPDVFARERLADNISLPEARIQVWFSNR 360
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 82/192 (42%), Gaps = 42/192 (21%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR--------GSTGSVNSANTT-----------------T 373
QVWFSNRRAKWRREEKLRNQRR G G ++ N T T
Sbjct: 354 QVWFSNRRAKWRREEKLRNQRRGGSGGGGGGGGGGLDQQNGTPAALSSSSASVSPPAGAT 413
Query: 374 STTALDHVPPTSQSPPPSSRLP-LNPGGFNPSSMYSSIPQP-AGMDSYNPSCLQQAAREH 431
S ++RL + GFN MY SI QP A M + N +
Sbjct: 414 SNAVGGGGGGGGGGGGHNNRLASIQAAGFN--HMYQSISQPIATMPTDNYGSMSSMVSGG 471
Query: 432 HHH-------SSYSYMFH----DSLHSLQSAYQRAAPAAHSSPHPHPA--HPGSSPYGTS 478
HHH SSY YMFH DSL++ + P + H A HP + P T
Sbjct: 472 HHHHHHHHPASSYPYMFHHPPPDSLYNHPVSSSPRVPCQPAPAHSVNANTHPAAYPTSTH 531
Query: 479 NSVNGPPTSTGT 490
++ N P +TGT
Sbjct: 532 HASNTSPGATGT 543
>gi|328716920|ref|XP_001944246.2| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
pisum]
Length = 622
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 132/212 (62%), Gaps = 56/212 (26%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQ-------------------TSETVYDKLRMFNGQPG 43
VSSINRVLRNLAAQKE QAS+ +Q +E+VYDKLRMFNGQ G
Sbjct: 200 VSSINRVLRNLAAQKEHQASSTHQPGGGNGLSGGGGGIGGGGGAAESVYDKLRMFNGQTG 259
Query: 44 WAWYPGSTP--------------PPSPAHLALP----HNPGS-------------VTPIS 72
W WY P PSP H AL H+PG+ +T +S
Sbjct: 260 WPWYAAPPPPPPPSAGGPPVHGGAPSPHHPALVGSAGHHPGNPAAASLATATTASLTAVS 319
Query: 73 RDDAKEH------ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
RDD + ESTSD NSE NSSAD+DSQ+RLRLKRKLQRNRTSFTN+QIDSLEKEF
Sbjct: 320 RDDIQRRAAELAPESTSDGNSEHNSSADDDSQLRLRLKRKLQRNRTSFTNDQIDSLEKEF 379
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINR 158
ERTHYPDVFARERLAD I LPEARIQV NR
Sbjct: 380 ERTHYPDVFARERLADNISLPEARIQVWFSNR 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 25/106 (23%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
TN ++ + +++R P +FA R+RL + I VSSINRVLRNLAAQKE Q
Sbjct: 160 TNGVVNKI-ADYKR-ECPSIFAWEIRDRLLSEGVCSNDNIPSVSSINRVLRNLAAQKEHQ 217
Query: 171 ASAHNQ-------------------TSETVYDKLRMFNGQPGWAWY 197
AS+ +Q +E+VYDKLRMFNGQ GW WY
Sbjct: 218 ASSTHQPGGGNGLSGGGGGIGGGGGAAESVYDKLRMFNGQTGWPWY 263
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 50/89 (56%), Gaps = 23/89 (25%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQ----------- 279
P +FA R+RL + I VSSINRVLRNLAAQKE QAS+ +Q
Sbjct: 175 PSIFAWEIRDRLLSEGVCSNDNIPSVSSINRVLRNLAAQKEHQASSTHQPGGGNGLSGGG 234
Query: 280 --------TSETVYDKLRMFNGQPGWAWY 300
+E+VYDKLRMFNGQ GW WY
Sbjct: 235 GGIGGGGGAAESVYDKLRMFNGQTGWPWY 263
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLAD I LPEARIQV NR
Sbjct: 377 KEFERTHYPDVFARERLADNISLPEARIQVWFSNR 411
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 82/192 (42%), Gaps = 42/192 (21%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR--------GSTGSVNSANTT-----------------T 373
QVWFSNRRAKWRREEKLRNQRR G G ++ N T T
Sbjct: 405 QVWFSNRRAKWRREEKLRNQRRGGSGGGGGGGGGGLDQQNGTPAALSSSSASVSPPAGAT 464
Query: 374 STTALDHVPPTSQSPPPSSRLP-LNPGGFNPSSMYSSIPQP-AGMDSYNPSCLQQAAREH 431
S ++RL + GFN MY SI QP A M + N +
Sbjct: 465 SNAVGGGGGGGGGGGGHNNRLASIQAAGFN--HMYQSISQPIATMPTDNYGSMSSMVSGG 522
Query: 432 HHH-------SSYSYMFH----DSLHSLQSAYQRAAPAAHSSPHPHPA--HPGSSPYGTS 478
HHH SSY YMFH DSL++ + P + H A HP + P T
Sbjct: 523 HHHHHHHHPASSYPYMFHHPPPDSLYNHPVSSSPRVPCQPAPAHSVNANTHPAAYPTSTH 582
Query: 479 NSVNGPPTSTGT 490
++ N P +TGT
Sbjct: 583 HASNTSPGATGT 594
>gi|78370178|gb|ABB43130.1| Pax-6 [Daphnia pulex]
Length = 288
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/163 (67%), Positives = 121/163 (74%), Gaps = 18/163 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLAAQKEQQ++A SE+VYDKLRMFNGQ G WAWYPG+ PP PA L+L
Sbjct: 129 VSSINRVLRNLAAQKEQQSAA--AASESVYDKLRMFNGQAGGWAWYPGAPPPTHPA-LSL 185
Query: 62 PHNPGSVTPI---------SRDDAKEHES----TSDINSEP-NSSADEDSQMRLRLKRKL 107
PH TP+ RDD + + S NS+ NSS DED QMRLRLKRKL
Sbjct: 186 PHGHVPATPLPSGGGGHHLIRDDPHKRDCNDGNISXGNSDLHNSSGDEDPQMRLRLKRKL 245
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
QRNRTSFTNEQ +SLEKEFERTHYPDV ARERLA+KIGLPEAR
Sbjct: 246 QRNRTSFTNEQXESLEKEFERTHYPDVXARERLAEKIGLPEAR 288
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 102/211 (48%), Gaps = 74/211 (35%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLA 164
R TS +I ++E P +FA R+RL + I VSSINRVLRNLA
Sbjct: 86 RVATSCVVTKIADYKREC-----PSIFAWEIRDRLLSEGVCNNDTIPSVSSINRVLRNLA 140
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPTPSPAHLALP--HNPGSVTP- 220
AQKEQQ++A SE+VYDKLRMFNGQ G WAWYPG+ P PA L+LP H P + P
Sbjct: 141 AQKEQQSAA--AASESVYDKLRMFNGQAGGWAWYPGAPPPTHPA-LSLPHGHVPATPLPS 197
Query: 221 ------ISRDD------------------------------------------------- 225
+ RDD
Sbjct: 198 GGGGHHLIRDDPHKRDCNDGNISXGNSDLHNSSGDEDPQMRLRLKRKLQRNRTSFTNEQX 257
Query: 226 ---AKEFERTHYPDVFARERLADKIGLPEAR 253
KEFERTHYPDV ARERLA+KIGLPEAR
Sbjct: 258 ESLEKEFERTHYPDVXARERLAEKIGLPEAR 288
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 64/95 (67%), Gaps = 8/95 (8%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL + I VSSINRVLRNLAAQKEQQ++A SE+VYDKLRM
Sbjct: 104 PSIFAWEIRDRLLSEGVCNNDTIPSVSSINRVLRNLAAQKEQQSAA--AASESVYDKLRM 161
Query: 291 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPI 324
FNGQ GWAWYPG+ P PA L+LPH TP+
Sbjct: 162 FNGQAGGWAWYPGAPPPTHPA-LSLPHGHVPATPL 195
>gi|195469409|ref|XP_002099630.1| GE14563 [Drosophila yakuba]
gi|194185731|gb|EDW99342.1| GE14563 [Drosophila yakuba]
Length = 543
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 141/206 (68%), Gaps = 41/206 (19%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYP------------G 49
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNTTTTHLTLPPA 201
Query: 50 STPPPSPAHLALPHNPGSVTPISRDDAKE--------------HESTSDINSEPNSSADE 95
+T SPA+L PG +RDD+++ H+STSD NSE NSS DE
Sbjct: 202 ATVVTSPANL-----PGQG---NRDDSQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDE 253
Query: 96 DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DSQMRLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV
Sbjct: 254 DSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWF 313
Query: 156 INRVLRNLAAQKEQQASAHNQTSETV 181
NR + ++E++ ++++TV
Sbjct: 314 SNRRAK---WRREEKMRTQRRSADTV 336
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 178/438 (40%), Gaps = 134/438 (30%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYP------------GSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHY 234
FNGQ GWAWYP +T SPA+L PG +RDD+++ E
Sbjct: 177 FNGQTGGWAWYPSNTTTTHLTLPPAATVVTSPANL-----PGQG---NRDDSQKREL--- 225
Query: 235 PDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 294
+ ++VS N E +S + + K ++ Q
Sbjct: 226 ----------------QFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKL---Q 266
Query: 295 PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEK 354
+ H P D GL ++ QVWFSNRRAKWRREEK
Sbjct: 267 RNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGL-PEARIQVWFSNRRAKWRREEK 325
Query: 355 LRNQRRG-----------------------------------STGSVNSANTTTSTTALD 379
+R QRR + ++ A +S +
Sbjct: 326 MRTQRRSADTVDGSGRPSTANNSSGTTTSSSVATSNNSTPGIANAAILVAERASSALISN 385
Query: 380 HVPPTSQSP--------------------PPSSRLPLNPGGFNPSSMYSSIPQP------ 413
+P S P P + RLPLN GFN +MYSSIPQP
Sbjct: 386 SLPEASNGPTVLGGEANATHTSSESPPLQPAAPRLPLN-SGFN--TMYSSIPQPIATMAE 442
Query: 414 ---AGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA--------APAAHSS 462
+ + S PSCLQQ +Y YMFHD L SL S Y A AAH
Sbjct: 443 NYNSSLGSMTPSCLQQ-------RDAYPYMFHDPL-SLGSPYVPAHHRNTACNPAAAHQQ 494
Query: 463 PHPHPAHPGSSPYGTSNS 480
P H + SSP +SN+
Sbjct: 495 PPQHGVYTNSSPMPSSNT 512
>gi|442614511|ref|NP_001259080.1| twin of eyeless, isoform C [Drosophila melanogaster]
gi|440218170|gb|AGB96570.1| twin of eyeless, isoform C [Drosophila melanogaster]
Length = 526
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 121/169 (71%), Gaps = 28/169 (16%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ GWAWYP +T + AHL L
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNT---TTAHLTL 198
Query: 62 PHNPGSVTP-------ISRDDAKE--------------HESTSDINSEPNSSADEDSQMR 100
P VT RDD ++ H+STSD NSE NSS DEDSQMR
Sbjct: 199 PPAASVVTSPANLSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMR 258
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
LRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPE
Sbjct: 259 LRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEV 307
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 181/413 (43%), Gaps = 101/413 (24%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADK 246
FNGQ GWAWYP +T T AHL LP VT A + DV RE
Sbjct: 177 FNGQTGGWAWYPSNTTT---AHLTLPPAASVVT----SPANLSGQADRDDVQKREL---- 225
Query: 247 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 306
+ ++VS N E +S + + K ++ Q +
Sbjct: 226 ----QFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRLKRKL---QRNRTSFSNEQID 278
Query: 307 PSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGS---- 362
H P D GL + VWFSNRRAKWRREEK+R QRR +
Sbjct: 279 SLEKEFERTHYPDVFARERLADKIGLPE-----VWFSNRRAKWRREEKMRTQRRSADTVD 333
Query: 363 -TGSVNSANTTTSTTALDHVP----------------------------------PTSQS 387
+G ++AN + TTA V +S+S
Sbjct: 334 GSGRTSTANNPSGTTASSSVATSNNSTPGIVNSAINVAERTSSALVLGGEANTTHTSSES 393
Query: 388 P---PPSSRLPLNPGGFNPSSMYSSIPQP---------AGMDSYNPSCLQQAAREHHHHS 435
P P + RLPLN GFN +MYSSIPQP + + S PSCLQQ
Sbjct: 394 PPLQPAAPRLPLN-SGFN--TMYSSIPQPIATMAENYNSSLGSMTPSCLQQ-------RD 443
Query: 436 SYSYMFHDSLHSLQSAYQRAA--------PAAHSSPHPHPAHPGSSPYGTSNS 480
+Y YMFHD L SL S Y A AAH P H + SSP +SN+
Sbjct: 444 AYPYMFHDPL-SLGSPYVSAHHRNTACNPSAAHQQPPQHGVYTNSSPMPSSNT 495
>gi|357630890|gb|EHJ78711.1| twin of eyeless [Danaus plexippus]
Length = 409
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 120/165 (72%), Gaps = 19/165 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP--GWAWYPG-------STPP 53
VSSINRVLRNLA+QKEQ ASA N ++VY+KLRMFNGQ GW WYPG + P
Sbjct: 122 VSSINRVLRNLASQKEQAASAQN---DSVYEKLRMFNGQAATGW-WYPGLPTAPAPTIPA 177
Query: 54 PSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTS 113
P P L P R D + E+ SD NSE SS DEDSQMRLRLKRKLQRNRTS
Sbjct: 178 PIPQQLNRPEEH------KRADTLQSEAGSDGNSEHASSGDEDSQMRLRLKRKLQRNRTS 231
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FTN+QIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 232 FTNDQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 276
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 82/183 (44%), Gaps = 56/183 (30%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVY----- 182
P +FA R+RL + I VSSINRVLRNLA+QKEQ ASA N ++VY
Sbjct: 97 PSIFAWEIRDRLLSENVCNNDNIPSVSSINRVLRNLASQKEQAASAQN---DSVYEKLRM 153
Query: 183 ---------------------------------------DKLRMFNGQPGWAWYPGSTPT 203
D L+ G G + + S
Sbjct: 154 FNGQAATGWWYPGLPTAPAPTIPAPIPQQLNRPEEHKRADTLQSEAGSDGNSEHASSGDE 213
Query: 204 PSPAHL----ALPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSS 258
S L L N S T D KEFERTHYPDVFARERLA+KIGLPEARIQV
Sbjct: 214 DSQMRLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWF 273
Query: 259 INR 261
NR
Sbjct: 274 SNR 276
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 67/144 (46%), Gaps = 42/144 (29%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLR+QRR SP P +RLPLN
Sbjct: 270 QVWFSNRRAKWRREEKLRSQRR----------------------DAPASPAPPARLPLN- 306
Query: 399 GGFNPSSMYSSIPQPAG--MDSY-------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQ 449
GGFN SMYS IPQP D+Y + SCLQQ Y YMF D L
Sbjct: 307 GGFN--SMYSPIPQPIATMTDTYSSMSSGLSSSCLQQ------RDGGYPYMFGDVLSG-- 356
Query: 450 SAYQRAAPAAHSSPHPHPAHPGSS 473
Y+ A + + P GS+
Sbjct: 357 GGYRAPAAHQQHAAYSQPQSAGST 380
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 12/92 (13%)
Query: 217 SVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQ 272
+ TP+ + A +++R P +FA R+RL + I VSSINRVLRNLA+QKEQ
Sbjct: 81 ATTPVVQKIA-DYKR-ECPSIFAWEIRDRLLSENVCNNDNIPSVSSINRVLRNLASQKEQ 138
Query: 273 QASAHNQTSETVYDKLRMFNGQP--GWAWYPG 302
ASA N ++VY+KLRMFNGQ GW WYPG
Sbjct: 139 AASAQN---DSVYEKLRMFNGQAATGW-WYPG 166
>gi|195175466|ref|XP_002028472.1| GL17563 [Drosophila persimilis]
gi|198462201|ref|XP_002135664.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
gi|194103225|gb|EDW25268.1| GL17563 [Drosophila persimilis]
gi|198139762|gb|EDY70832.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
Length = 546
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 131/176 (74%), Gaps = 27/176 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ GWAWYP +T AHLAL
Sbjct: 146 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTSGWAWYPSNT----TAHLAL 198
Query: 62 PHNPGSVTP-------ISRDDAKE------------HESTSDINSEPNSSADEDSQMRLR 102
P P ++ I+RD+ ++ HESTSD NS+ NSS DEDSQMRLR
Sbjct: 199 PPTPTALPTPTNLSGQINRDEVQKRDIYPGDVSHPSHESTSDGNSDHNSSGDEDSQMRLR 258
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 259 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 314
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 125/272 (45%), Gaps = 57/272 (20%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLA+KIGLPEARIQV NR + ++E++ ++++ V
Sbjct: 280 KEFERTHYPDVFARERLAEKIGLPEARIQVWFSNRRAK---WRREEKMRTQRRSADNV-- 334
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP-ISRDDAKGLVQQSARQVWFSNR 345
G G A + PS A + + TP I G+ + A SN
Sbjct: 335 -----GGSSGRA---STNNQPSTAASSSVTPSSNSTPGIVSSAGNGIGSEGASSAIISNN 386
Query: 346 RAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSS 405
N G N+ +T++ + L V P R+PLN GFN +
Sbjct: 387 TLP-----DTSNAPTVLGGDANATHTSSESPPLQAVAP---------RIPLN-AGFN--A 429
Query: 406 MYSSIPQP------------AGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAY- 452
MYSSIPQP + + S P+CLQQ SY YMFHD L SL S Y
Sbjct: 430 MYSSIPQPIATMAENYNSMTSSLGSMTPTCLQQ-------RDSYPYMFHDPL-SLGSPYA 481
Query: 453 ---QRAAPAAHSSPHPHPAHPGSSPYGTSNSV 481
R AP ++ H P P YG S+S+
Sbjct: 482 PPHHRNAPCNPAAAHQQP--PQHGVYGNSSSM 511
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 64/93 (68%), Gaps = 10/93 (10%)
Query: 217 SVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
+ TP+ + A +++R P +FA R+RL ++++ + VSSINRVLRNLA+QKEQ
Sbjct: 105 ATTPVVQKIA-DYKR-ECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQ 162
Query: 273 QASAHNQTSETVYDKLRMFNGQP-GWAWYPGST 304
QA N E+VY+KLRMFNGQ GWAWYP +T
Sbjct: 163 QAQQQN---ESVYEKLRMFNGQTSGWAWYPSNT 192
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%), Gaps = 8/75 (10%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 121 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 177
Query: 188 FNGQP-GWAWYPGST 201
FNGQ GWAWYP +T
Sbjct: 178 FNGQTSGWAWYPSNT 192
>gi|332022174|gb|EGI62491.1| Paired box protein Pax-6 [Acromyrmex echinatior]
Length = 631
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 128/182 (70%), Gaps = 27/182 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TPP P
Sbjct: 265 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPPHHPL 323
Query: 58 HLALP--HNPGSVTPI-------SRDDA------------KEHESTSDINSEPNSSADED 96
+P PGS + RDD+ + E+TSD NSE NSS DED
Sbjct: 324 ATGIPTAATPGSGQTLLPGSQLHGRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDED 383
Query: 97 SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
SQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV
Sbjct: 384 SQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFS 443
Query: 157 NR 158
NR
Sbjct: 444 NR 445
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 153/342 (44%), Gaps = 49/342 (14%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKL 185
P +FA R+RL + I VSSINRVLRNLA+QKEQQA+A E+VYDKL
Sbjct: 240 PSIFAWEIRDRLLQEGVCNNDNIPSVSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKL 299
Query: 186 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLAD 245
RMFNGQ W P P H P + TP S + H
Sbjct: 300 RMFNGQAA-GWPPAWYSATPPHHPLATGIPTAATPGSGQTLLPGSQLH------------ 346
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS-ETVYDKLRMFNG-QPGWAWYPGS 303
G ++ ++ S +L + S HN + E +LR+ Q +
Sbjct: 347 --GRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSFSNE 404
Query: 304 TPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGST 363
H P V R K + ++ QVWFSNRRAKWRREEKLRNQRR +
Sbjct: 405 QIDSLEKEFERTHYP-DVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQRRAAV 463
Query: 364 GSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGM--DSY-- 419
V + + ++ + P + RLPLN GFN +MYSSIPQP D+Y
Sbjct: 464 DQVVAGGSGGGSSGTA----PPAATPATPRLPLN-AGFN--AMYSSIPQPIATMPDTYSS 516
Query: 420 ---------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAY 452
SCLQQ A + +Y+FH+ LHSL +Y
Sbjct: 517 MSSSLGGSMGGSCLQQRAEGYP-----AYVFHEPLHSLTQSY 553
>gi|254733072|gb|ACT79981.1| twin of eyeless, partial [Nasonia vitripennis]
Length = 203
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/184 (62%), Positives = 128/184 (69%), Gaps = 37/184 (20%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY + P+
Sbjct: 21 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPHAWYSAT-----PS 75
Query: 58 HLALPHN-PGSVTPIS------------RDDA--------------KEHESTSDINSEPN 90
H +L PG+ TP S RDD+ + E+TSD NSE N
Sbjct: 76 HHSLATGIPGAATPGSGQSLLPGTQLHGRDDSLLKRTGTDTGSLLSHQQETTSDGNSEHN 135
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS DEDSQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEAR
Sbjct: 136 SSGDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEAR 195
Query: 151 IQVS 154
IQVS
Sbjct: 196 IQVS 199
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/31 (96%), Positives = 31/31 (100%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVS 257
KEFERTHYPDVFARERLA+KIGLPEARIQVS
Sbjct: 169 KEFERTHYPDVFARERLAEKIGLPEARIQVS 199
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 11/74 (14%)
Query: 153 VSSINRVLRNLAA--QKEQQASAHNQTSETVYDKLRMFNGQ-PGW--AWYPGSTPTPSPA 207
VSSINRVLRNLA+ +++ A +Q +E+VYDKLRMFNGQ GW AWY + +P+
Sbjct: 21 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPHAWY-----SATPS 75
Query: 208 HLALPHN-PGSVTP 220
H +L PG+ TP
Sbjct: 76 HHSLATGIPGAATP 89
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 11/74 (14%)
Query: 256 VSSINRVLRNLAA--QKEQQASAHNQTSETVYDKLRMFNGQ-PGW--AWYPGSTPTPSPA 310
VSSINRVLRNLA+ +++ A +Q +E+VYDKLRMFNGQ GW AWY + +P+
Sbjct: 21 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPHAWY-----SATPS 75
Query: 311 HLALPHN-PGSVTP 323
H +L PG+ TP
Sbjct: 76 HHSLATGIPGAATP 89
>gi|345496344|ref|XP_001602823.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
Length = 522
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 129/186 (69%), Gaps = 35/186 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY + P+
Sbjct: 148 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPHAWYSAT-----PS 202
Query: 58 HLALPHN-PGSVTPIS------------RDDA------------KEHESTSDINSEPNSS 92
H +L PG+ TP S RDD+ + E+TSD NSE NSS
Sbjct: 203 HHSLATGIPGAATPGSGQSLLPGTQLHGRDDSLLKRTDTGSLLSHQQETTSDGNSEHNSS 262
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
DEDSQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQ
Sbjct: 263 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 322
Query: 153 VSSINR 158
V NR
Sbjct: 323 VWFSNR 328
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 184/411 (44%), Gaps = 115/411 (27%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKL 185
P +FA R+RL + I VSSINRVLRNLA+QKEQQA+A E+VYDKL
Sbjct: 123 PSIFAWEIRDRLLQEGVCNNDNIPSVSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKL 182
Query: 186 RMFNGQP-GW--AWYPGSTPTPSPAHLALPHN-PGSVTPIS------------RDDAKEF 229
RMFNGQ GW AWY + +P+H +L PG+ TP S RDD+
Sbjct: 183 RMFNGQAAGWPHAWY-----SATPSHHSLATGIPGAATPGSGQSLLPGTQLHGRDDSL-L 236
Query: 230 ERTHYPDVFARERLADKIGLPE--------ARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+RT + + ++ G E +++++ ++ RN + +Q + +
Sbjct: 237 KRTDTGSLLSHQQETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEF 296
Query: 282 ETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVW 341
E + YP V R K + ++ QVW
Sbjct: 297 ERTH--------------YP------------------DVFARERLAEKIGLPEARIQVW 324
Query: 342 FSNRRAKWRREEKLRNQRRGSTGSV----NSANTTTSTTALDHVPPTSQSPPPSSRLPLN 397
FSNRRAKWRREEKLRNQRR + V ++ N + + PP + P + R+PLN
Sbjct: 325 FSNRRAKWRREEKLRNQRRAAVDQVVGGASNGNAGGGSGNANSGPPAAT--PATPRIPLN 382
Query: 398 PGGFNPSSMYSSIPQPAGM--DSYN-----------PSCLQQAAREHHHHSSYSYMFHDS 444
GFN +MYSSIPQP D+Y+ SCLQQ A + +Y+FH+
Sbjct: 383 -AGFN--AMYSSIPQPIATMPDTYSSMTSSLGGSMGGSCLQQRADGYP-----AYVFHEP 434
Query: 445 LHSLQSAY--------------QRAAPAAHSSPHP------HPAHPGSSPY 475
LHSL +Y R P P PA PGS+PY
Sbjct: 435 LHSLTQSYSHAAHQSAAAHSQPHRGIPGGSHGPGTPTTAGGQPAGPGSAPY 485
>gi|307189169|gb|EFN73617.1| Paired box protein Pax-6 [Camponotus floridanus]
Length = 516
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/182 (63%), Positives = 127/182 (69%), Gaps = 27/182 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TP P
Sbjct: 150 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPSHHPL 208
Query: 58 HLALP--HNPGSVTPI-------SRDDA------------KEHESTSDINSEPNSSADED 96
+P PGS + RDDA + E+TSD NSE NSS DED
Sbjct: 209 ATGIPTAATPGSGQSLLPGSQLHGRDDALLKRSDTGSLLSHQQETTSDGNSEHNSSGDED 268
Query: 97 SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
SQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV
Sbjct: 269 SQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFS 328
Query: 157 NR 158
NR
Sbjct: 329 NR 330
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 167/360 (46%), Gaps = 85/360 (23%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKL 185
P +FA R+RL + I VSSINRVLRNLA+QKEQQA+A E+VYDKL
Sbjct: 125 PSIFAWEIRDRLLQEGVCNNDNIPSVSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKL 184
Query: 186 RMFNGQP-GW--AWYPGSTPTPSPAHLALP--HNPGSVTPI-------SRDDAKEFERTH 233
RMFNGQ GW AWY +TP+ P +P PGS + RDDA +R+
Sbjct: 185 RMFNGQAAGWPPAWY-SATPSHHPLATGIPTAATPGSGQSLLPGSQLHGRDDAL-LKRSD 242
Query: 234 YPDVFARERLADKIGLPE--------ARIQVSSINRVLRNLAAQKEQQASAHNQTSETVY 285
+ + ++ G E +++++ ++ RN + +Q + + E +
Sbjct: 243 TGSLLSHQQETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTH 302
Query: 286 DKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNR 345
YP V R K + ++ QVWFSNR
Sbjct: 303 --------------YP------------------DVFARERLAEKIGLPEARIQVWFSNR 330
Query: 346 RAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSS 405
RAKWRREEKLRNQRR + V + + ++ + P + RLPLN GFN +
Sbjct: 331 RAKWRREEKLRNQRRAAVDQVVAGGSGGGSSGAA----PPAATPATPRLPLN-AGFN--A 383
Query: 406 MYSSIPQPAGM--DSY-----------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAY 452
MYSSIPQP D+Y SCLQQ A + +Y+FH+ LHSL +Y
Sbjct: 384 MYSSIPQPIATMPDTYSSMSSSLGGSMGGSCLQQRAEGYP-----AYVFHEPLHSLTQSY 438
>gi|340715062|ref|XP_003396039.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
gi|350414727|ref|XP_003490400.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
Length = 514
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 127/182 (69%), Gaps = 27/182 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TP P
Sbjct: 150 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPSHHPL 208
Query: 58 HLALP--HNPGSVTPI-------SRDDA------------KEHESTSDINSEPNSSADED 96
+P PGS + RDD+ + E+TSD NSE NSS DED
Sbjct: 209 ATGIPTAATPGSGQSLLPGSQLHGRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDED 268
Query: 97 SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
SQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV
Sbjct: 269 SQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFS 328
Query: 157 NR 158
NR
Sbjct: 329 NR 330
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 168/358 (46%), Gaps = 56/358 (15%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKL 185
P +FA R+RL + I VSSINRVLRNLA+QKEQQA+A E+VYDKL
Sbjct: 125 PSIFAWEIRDRLLQEGVCNNDNIPSVSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKL 184
Query: 186 RMFNGQP-GW--AWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARER 242
RMFNGQ GW AWY +TP+ P + P + TP S + H
Sbjct: 185 RMFNGQAAGWPPAWY-SATPSHHPLATGI---PTAATPGSGQSLLPGSQLH--------- 231
Query: 243 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS-ETVYDKLRMFNG-QPGWAWY 300
G ++ ++ S +L + S HN + E +LR+ Q +
Sbjct: 232 -----GRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSF 286
Query: 301 PGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R K + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 287 SNEQIDSLEKEFERTHYP-DVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 345
Query: 361 GSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGM--DS 418
+ V ++ ++ + P + RLPLN GFN +MYSSIPQP D+
Sbjct: 346 AAVDQVVGGGSSGGGSSTA----PPAATPATPRLPLN-AGFN--AMYSSIPQPIATMPDT 398
Query: 419 Y-----------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA-APAAHSSPH 464
Y SCLQQ A + +Y+FH+ LHSL +Y A + AAHS PH
Sbjct: 399 YSSMSSSLGGSMGGSCLQQRAEGYP-----AYVFHEPLHSLTQSYSHAHSTAAHSQPH 451
>gi|307211180|gb|EFN87393.1| Paired box protein Pax-6 [Harpegnathos saltator]
Length = 506
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 122/161 (75%), Gaps = 18/161 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TP P
Sbjct: 176 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPSHHPL 234
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
H GS+ + + E+TSD NSE NSS DEDSQ+RLRLKRKLQRNRTSF+NE
Sbjct: 235 HT------GSLL------SHQQETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSFSNE 282
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV NR
Sbjct: 283 QIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFSNR 323
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 159/340 (46%), Gaps = 79/340 (23%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKL 185
P +FA R+RL + I VSSINRVLRNLA+QKEQQA+A E+VYDKL
Sbjct: 151 PSIFAWEIRDRLLQEGVCNNDNIPSVSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKL 210
Query: 186 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLAD 245
RMFNGQ A +P + + +P+H P + GS+ ++ + H +
Sbjct: 211 RMFNGQA--AGWPPAWYSATPSHH--PLHTGSLLSHQQETTSDGNSEH-----------N 255
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP 305
G ++++++ ++ RN + +Q + + E + YP
Sbjct: 256 SSGDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTH--------------YP---- 297
Query: 306 TPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGS 365
V R K + ++ QVWFSNRRAKWRREEKLRNQRR +
Sbjct: 298 --------------DVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQRRAAVDQ 343
Query: 366 VNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGM--DSY---- 419
V + + + A + P + RLPLN GFN +MYSSIPQP D+Y
Sbjct: 344 VVAGGSGGGSGAA-----PPAATPATPRLPLN-AGFN--AMYSSIPQPIATMPDTYSSMS 395
Query: 420 -------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAY 452
SCLQQ A + +Y+FH+ LHSL +Y
Sbjct: 396 SSLGGSMGGSCLQQRADGYP-----AYVFHEPLHSLTQSY 430
>gi|380020309|ref|XP_003694031.1| PREDICTED: paired box protein Pax-6-like [Apis florea]
Length = 564
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 127/182 (69%), Gaps = 27/182 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TP P
Sbjct: 200 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPSHHPL 258
Query: 58 HLALP--HNPGSVTPI-------SRDDA------------KEHESTSDINSEPNSSADED 96
+P PGS + RDD+ + E+TSD NSE NSS DED
Sbjct: 259 ATGIPTAATPGSGQSLLPGSQLHGRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDED 318
Query: 97 SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
SQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV
Sbjct: 319 SQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFS 378
Query: 157 NR 158
NR
Sbjct: 379 NR 380
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 158/333 (47%), Gaps = 52/333 (15%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPTPSPA 207
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TP+ P
Sbjct: 200 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPSHHPL 258
Query: 208 HLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 267
+ P + TP S + H G ++ ++ S +L +
Sbjct: 259 ATGI---PTAATPGSGQSLLPGSQLH--------------GRDDSLLKRSDTGSLLSHQQ 301
Query: 268 AQKEQQASAHNQTS-ETVYDKLRMFNG-QPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
S HN + E +LR+ Q + H P V
Sbjct: 302 ETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYP-DVFARE 360
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTS 385
R K + ++ QVWFSNRRAKWRREEKLRNQRR + V ++ ++
Sbjct: 361 RLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQRRAAVDQVVGGGSSGGGSSTA----PP 416
Query: 386 QSPPPSSRLPLNPGGFNPSSMYSSIPQPAGM--DSY-----------NPSCLQQAAREHH 432
+ P + RLPLN GFN +MYSSIPQP D+Y SCLQQ A +
Sbjct: 417 AATPATPRLPLN-AGFN--AMYSSIPQPIATMPDTYSSMSSSLGGSMGGSCLQQRAEGYP 473
Query: 433 HHSSYSYMFHDSLHSLQSAYQRA-APAAHSSPH 464
+Y+FH+ LHSL +Y A + AAHS PH
Sbjct: 474 -----AYVFHEPLHSLTQSYSHAHSTAAHSQPH 501
>gi|383859947|ref|XP_003705453.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
Length = 628
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 127/182 (69%), Gaps = 27/182 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKLRMFNGQP-GW--AWYPGSTPPPSPA 57
VSSINRVLRNLA+QKEQQA+A E+VYDKLRMFNGQ GW AWY +TP P
Sbjct: 264 VSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKLRMFNGQAAGWPPAWY-SATPSHHPL 322
Query: 58 HLALP--HNPGSVTPI-------SRDDA------------KEHESTSDINSEPNSSADED 96
+P PGS + RDD+ + E+TSD NSE NSS DED
Sbjct: 323 ATGIPTAATPGSGQSLLPGSQLHGRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDED 382
Query: 97 SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
SQ+RLRLKRKLQRNRTSF+NEQIDSLEKEFERTHYPDVFARERLA+KIGLPEARIQV
Sbjct: 383 SQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQVWFS 442
Query: 157 NR 158
NR
Sbjct: 443 NR 444
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 169/358 (47%), Gaps = 56/358 (15%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS--ETVYDKL 185
P +FA R+RL + I VSSINRVLRNLA+QKEQQA+A E+VYDKL
Sbjct: 239 PSIFAWEIRDRLLQEGVCNNDNIPSVSSINRVLRNLASQKEQQAAAVQAHQGAESVYDKL 298
Query: 186 RMFNGQP-GW--AWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARER 242
RMFNGQ GW AWY +TP+ P + P + TP S + H
Sbjct: 299 RMFNGQAAGWPPAWY-SATPSHHPLATGI---PTAATPGSGQSLLPGSQLH--------- 345
Query: 243 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS-ETVYDKLRMFNG-QPGWAWY 300
G ++ ++ S +L + S HN + E +LR+ Q +
Sbjct: 346 -----GRDDSLLKRSDTGSLLSHQQETTSDGNSEHNSSGDEDSQVRLRLKRKLQRNRTSF 400
Query: 301 PGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R K + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 401 SNEQIDSLEKEFERTHYP-DVFARERLAEKIGLPEARIQVWFSNRRAKWRREEKLRNQRR 459
Query: 361 GSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGM--DS 418
+ V ++ +++ + P + RLPLN GFN +MYSSIPQP D+
Sbjct: 460 AAVDQVVGGGSSGGSSSTA----PPAATPATPRLPLN-AGFN--AMYSSIPQPIATMPDT 512
Query: 419 Y-----------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA-APAAHSSPH 464
Y SCLQQ A + +Y+FH+ LHSL +Y A + AAHS PH
Sbjct: 513 YSSMSSSLGGSMGGSCLQQRAEGYP-----AYVFHEPLHSLTQSYSHAHSTAAHSQPH 565
>gi|189313475|gb|ACD88754.1| Pax6 isoform 1 [Limulus polyphemus]
Length = 456
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 125/185 (67%), Gaps = 29/185 (15%)
Query: 3 VSSINRVLRNLAAQKEQQA-SAHN---QTSETVYDKLRMFNGQPGWAWYP-GST-----P 52
VSSINRVLRNL +QK+QQ S H+ E+VYDKLR+ NG W WYP G T
Sbjct: 121 VSSINRVLRNLTSQKDQQEPSPHHVPMTGPESVYDKLRLLNGSQPWPWYPTGPTHHFHGI 180
Query: 53 PPSPAHLALPHNPGSVTPISRDDA-----------KEH--------ESTSDINSEPNSSA 93
PP+ + +AL N G V P+ + ++H ++TSD NSE NSSA
Sbjct: 181 PPTSSPVALGQNAGLVGPVHGGNGHPSLAACESHRQDHPSVKKDSIDATSDGNSENNSSA 240
Query: 94 DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
DEDSQ+R+RLKRKL RNRTSFTNEQI++LEKEFERTHYPDVFARERLA+KI LPEARIQV
Sbjct: 241 DEDSQLRMRLKRKLXRNRTSFTNEQIEALEKEFERTHYPDVFARERLAEKITLPEARIQV 300
Query: 154 SSINR 158
NR
Sbjct: 301 WFSNR 305
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 174/402 (43%), Gaps = 105/402 (26%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLA 164
R TS +I ++E P VFA R+RL AD + E VSSINRVLRNL
Sbjct: 78 RVATSAVVNKIADYKREC-----PSVFAWEIRDRLLADGVCNSENIPSVSSINRVLRNLT 132
Query: 165 AQKEQQA-SAHN---QTSETVYDKLRMFNGQPGWAWYP--------GSTPTPSPAHLALP 212
+QK+QQ S H+ E+VYDKLR+ NG W WYP G PT SP +AL
Sbjct: 133 SQKDQQEPSPHHVPMTGPESVYDKLRLLNGSQPWPWYPTGPTHHFHGIPPTSSP--VALG 190
Query: 213 HNPGSVTPISRDD------AKEFERTHYPDVFARERLADKIGLPE--------ARIQVSS 258
N G V P+ + A E R +P V A G E +++++
Sbjct: 191 QNAGLVGPVHGGNGHPSLAACESHRQDHPSVKKDSIDATSDGNSENNSSADEDSQLRMRL 250
Query: 259 INRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 318
++ RN + +Q A + E + YP
Sbjct: 251 KRKLXRNRTSFTNEQIEALEKEFERTH--------------YP----------------- 279
Query: 319 GSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTAL 378
V R K + ++ QVWFSNRRAKWRREEKLRNQRR T TT L
Sbjct: 280 -DVFARERLAEKITLPEARIQVWFSNRRAKWRREEKLRNQRR-------VVEQPTGTTVL 331
Query: 379 DHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQP-AGMDSYNPS----------CLQQA 427
PP+ RLP+N +N SMY S+ QP GM CLQQ
Sbjct: 332 ---------APPNGRLPINGTFYN--SMYPSLGQPMGGMGDSYSMPPSSSMASNHCLQQ- 379
Query: 428 AREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAH 469
+SY+YMFHD L SL S Y R++ S + HP++
Sbjct: 380 ----RDPTSYTYMFHDPL-SLGS-YSRSSCTPSQSINGHPSY 415
>gi|189313477|gb|ACD88755.1| Pax6 isoform 2 [Limulus polyphemus]
Length = 456
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 125/185 (67%), Gaps = 29/185 (15%)
Query: 3 VSSINRVLRNLAAQKEQQA-SAHN---QTSETVYDKLRMFNGQPGWAWYP-GST-----P 52
VSSINRVLRNL +QK+QQ S H+ E+VYDKLR+ NG W WYP G T
Sbjct: 121 VSSINRVLRNLTSQKDQQEPSPHHVPMTGPESVYDKLRLLNGSQPWPWYPTGPTHHFHGI 180
Query: 53 PPSPAHLALPHNPGSVTPISRDDA-----------KEH--------ESTSDINSEPNSSA 93
PP+ + +AL N G V P+ + ++H ++TSD NSE NSSA
Sbjct: 181 PPTSSPVALGQNAGLVGPVHGGNGHPSLAACESHRQDHPSVKKDSIDATSDGNSENNSSA 240
Query: 94 DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
DEDSQ+R+RLKRKL RNRTSFTNEQI++LEKEFERTHYPDVFARERLA+KI LPEARIQV
Sbjct: 241 DEDSQLRMRLKRKLXRNRTSFTNEQIEALEKEFERTHYPDVFARERLAEKITLPEARIQV 300
Query: 154 SSINR 158
NR
Sbjct: 301 WFSNR 305
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 174/402 (43%), Gaps = 105/402 (26%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLA 164
R TS +I ++E P VFA R+RL AD + E VSSINRVLRNL
Sbjct: 78 RVATSAVVNKIADYKREC-----PSVFAWEIRDRLLADGVCNSENIPSVSSINRVLRNLT 132
Query: 165 AQKEQQA-SAHN---QTSETVYDKLRMFNGQPGWAWYP--------GSTPTPSPAHLALP 212
+QK+QQ S H+ E+VYDKLR+ NG W WYP G PT SP +AL
Sbjct: 133 SQKDQQEPSPHHVPMTGPESVYDKLRLLNGSQPWPWYPTGPTHHFHGIPPTSSP--VALG 190
Query: 213 HNPGSVTPISRDD------AKEFERTHYPDVFARERLADKIGLPE--------ARIQVSS 258
N G V P+ + A E R +P V A G E +++++
Sbjct: 191 QNAGLVGPVHGGNGHPSLAACESHRQDHPSVKKDSIDATSDGNSENNSSADEDSQLRMRL 250
Query: 259 INRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 318
++ RN + +Q A + E + YP
Sbjct: 251 KRKLXRNRTSFTNEQIEALEKEFERTH--------------YP----------------- 279
Query: 319 GSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTAL 378
V R K + ++ QVWFSNRRAKWRREEKLRNQRR T TT L
Sbjct: 280 -DVFARERLAEKITLPEARIQVWFSNRRAKWRREEKLRNQRR-------VVEQPTGTTVL 331
Query: 379 DHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQP-AGMDSYNPS----------CLQQA 427
PP+ RLP+N +N SMY S+ QP GM CLQQ
Sbjct: 332 ---------APPNGRLPINGTFYN--SMYPSLGQPMGGMGDSYSMPPSSSMASNHCLQQ- 379
Query: 428 AREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAH 469
+SY+YMFHD L SL S Y R++ S + HP++
Sbjct: 380 ----RDPTSYTYMFHDPL-SLGS-YSRSSCTPSQSINGHPSY 415
>gi|241999742|ref|XP_002434514.1| paired box protein Pax-6, putative [Ixodes scapularis]
gi|215497844|gb|EEC07338.1| paired box protein Pax-6, putative [Ixodes scapularis]
Length = 427
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 117/178 (65%), Gaps = 9/178 (5%)
Query: 28 SETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINS 87
S++VYDKLRM NGQP W WYP PPP L+ PG++ P S D TSD NS
Sbjct: 143 SDSVYDKLRMLNGQP-WPWYPAGAPPP----LSAAGMPGALAPPSGADG----GTSDGNS 193
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E +SS DEDSQMRLRLKRKLQRNRTSF+N+QI++LEKEFERTHYPDVFARERLA+KI LP
Sbjct: 194 ENSSSCDEDSQMRLRLKRKLQRNRTSFSNDQIEALEKEFERTHYPDVFARERLAEKITLP 253
Query: 148 EARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPS 205
EARIQV + + AA K + A Q +++ N + AW P S + S
Sbjct: 254 EARIQVRTCRQRQSGTAAFKHHRRGAIFQPEGEERERVCTNNARWRPAWGPASACSSS 311
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 100/227 (44%), Gaps = 52/227 (22%)
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 184
E++R P +FA E + D++ L E +I V + +++ A S++VYDK
Sbjct: 94 EYKR-ECPSIFAWE-IRDRL-LSEGVCNNDNIPSVTSVECPMRIRRSIAFG-GSDSVYDK 149
Query: 185 LRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA------------------ 226
LRM NGQP W WYP P P L+ PG++ P S D
Sbjct: 150 LRMLNGQP-WPWYPAGAPPP----LSAAGMPGALAPPSGADGGTSDGNSENSSSCDEDSQ 204
Query: 227 -------------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KI LPEARIQV + +
Sbjct: 205 MRLRLKRKLQRNRTSFSNDQIEALEKEFERTHYPDVFARERLAEKITLPEARIQVRTCRQ 264
Query: 262 VLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPS 308
AA K + A Q +++ N + AW P S + S
Sbjct: 265 RQSGTAAFKHHRRGAIFQPEGEERERVCTNNARWRPAWGPASACSSS 311
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
Query: 214 NPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
P TP E++R P +FA E + D++ L E +I V + ++
Sbjct: 80 KPRVATPPVVGKIAEYKR-ECPSIFAWE-IRDRL-LSEGVCNNDNIPSVTSVECPMRIRR 136
Query: 274 ASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA 329
+ A S++VYDKLRM NGQP W WYP P P L+ PG++ P S D
Sbjct: 137 SIAFG-GSDSVYDKLRMLNGQP-WPWYPAGAPPP----LSAAGMPGALAPPSGADG 186
>gi|160333791|ref|NP_001103907.1| eyeless [Tribolium castaneum]
gi|158187657|gb|ABW23132.1| eyeless [Tribolium castaneum]
Length = 453
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 116/170 (68%), Gaps = 17/170 (10%)
Query: 3 VSSINRVLRNLAAQKEQ--QASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLA 60
VSSINRVLRNLAAQKEQ Q + +++VYDKLR+ NG G +W P TP SP + +
Sbjct: 121 VSSINRVLRNLAAQKEQTSQNPPVSSGNDSVYDKLRLLNGNQG-SWRP--TPWYSPGNTS 177
Query: 61 LPHNPGSVTP-ISRDDAKEHESTSD-INSEPNSSAD----------EDSQMRLRLKRKLQ 108
P P S P I DD + + D INS+ +S D +D Q RLRLKRKLQ
Sbjct: 178 FPLQPLSPPPTILADDINKKVTDLDGINSDETNSGDNSNAGSSIGPDDDQARLRLKRKLQ 237
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RNRTSFTN+QIDSLEKEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 238 RNRTSFTNDQIDSLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 287
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 142/325 (43%), Gaps = 74/325 (22%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLA 164
R T+ +I S ++E P +FA R+RL + I VSSINRVLRNLA
Sbjct: 78 RVATAEVVSKISSYKREC-----PSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLA 132
Query: 165 AQKEQ--QASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
AQKEQ Q + +++VYDKLR+ NG G +W P TP SP + + P P S P
Sbjct: 133 AQKEQTSQNPPVSSGNDSVYDKLRLLNGNQG-SWRP--TPWYSPGNTSFPLQPLSPPPTI 189
Query: 223 RDDAKEFERTHYPDVFARE-------RLADKIGLPEARIQVSSINRVLRNLAAQKEQQAS 275
D + T + + E IG + + ++ ++ RN + Q
Sbjct: 190 LADDINKKVTDLDGINSDETNSGDNSNAGSSIGPDDDQARLRLKRKLQRNRTSFTNDQID 249
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQ 335
+ + E + YP V R AK + +
Sbjct: 250 SLEKEFERTH--------------YP------------------DVFARERLAAKIGLPE 277
Query: 336 SARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP 395
+ QVWFSNRRAKWRREEKLRNQRRG+ P ++ P P++ P
Sbjct: 278 ARIQVWFSNRRAKWRREEKLRNQRRGA-------------------PAPAEHPGPAASPP 318
Query: 396 LNPGGFNPSSMYSSIPQPAGM-DSY 419
GFN +SMYS +P P + D+Y
Sbjct: 319 -RLQGFNNTSMYSPLPPPMSIADTY 342
>gi|270006446|gb|EFA02894.1| eyeless [Tribolium castaneum]
Length = 453
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 116/170 (68%), Gaps = 17/170 (10%)
Query: 3 VSSINRVLRNLAAQKEQ--QASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLA 60
VSSINRVLRNLAAQKEQ Q + +++VYDKLR+ NG G +W P TP SP + +
Sbjct: 121 VSSINRVLRNLAAQKEQTSQNPPVSSGNDSVYDKLRLLNGNQG-SWRP--TPWYSPGNTS 177
Query: 61 LPHNPGSVTP-ISRDDAKEHESTSD-INSEPNSSAD----------EDSQMRLRLKRKLQ 108
P P S P I DD + + D INS+ +S D +D Q RLRLKRKLQ
Sbjct: 178 FPLQPLSPPPTILADDINKKVTDLDGINSDETNSGDNSNAGSSIGPDDDQARLRLKRKLQ 237
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RNRTSFTN+QIDSLEKEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 238 RNRTSFTNDQIDSLEKEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 287
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 142/325 (43%), Gaps = 74/325 (22%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLA 164
R T+ +I S ++E P +FA R+RL + I VSSINRVLRNLA
Sbjct: 78 RVATAEVVSKISSYKREC-----PSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLA 132
Query: 165 AQKEQ--QASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
AQKEQ Q + +++VYDKLR+ NG G +W P TP SP + + P P S P
Sbjct: 133 AQKEQTSQNPPVSSGNDSVYDKLRLLNGNQG-SWRP--TPWYSPGNTSFPLQPLSPPPTI 189
Query: 223 RDDAKEFERTHYPDVFARE-------RLADKIGLPEARIQVSSINRVLRNLAAQKEQQAS 275
D + T + + E IG + + ++ ++ RN + Q
Sbjct: 190 LADDINKKVTDLDGINSDETNSGDNSNAGSSIGPDDDQARLRLKRKLQRNRTSFTNDQID 249
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQ 335
+ + E + YP V R AK + +
Sbjct: 250 SLEKEFERTH--------------YP------------------DVFARERLAAKIGLPE 277
Query: 336 SARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP 395
+ QVWFSNRRAKWRREEKLRNQRRG+ P ++ P P++ P
Sbjct: 278 ARIQVWFSNRRAKWRREEKLRNQRRGA-------------------PAPAEHPGPAASPP 318
Query: 396 LNPGGFNPSSMYSSIPQPAGM-DSY 419
GFN +SMYS +P P + D+Y
Sbjct: 319 -RLQGFNNTSMYSPLPPPMSIADTY 342
>gi|115501617|gb|ABI98856.1| paired box 6 transcript variant 11 [Columba livia]
Length = 355
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 106
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 107 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 153
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 154 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 106
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
P G S++ D KEFERTH
Sbjct: 107 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 73/163 (44%), Gaps = 64/163 (39%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 106
Query: 311 HLALPHNPG------------------------------SVTPISRDDAKGLVQQSAR-- 338
P G + T +++ + L ++ R
Sbjct: 107 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 339 ---------------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 209
>gi|115501605|gb|ABI98850.1| paired box 6 transcript variant 5 [Columba livia]
Length = 400
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 98 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 151
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 152 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 198
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 199 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 239
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 79/158 (50%), Gaps = 48/158 (30%)
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 197
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 91 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 141
Query: 198 PGSTPTPSPAHLALPHNPG------SVTPISRDD-------------------------- 225
PG++ PA P G S++ D
Sbjct: 142 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 201
Query: 226 --AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 202 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 239
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 77/173 (44%), Gaps = 67/173 (38%)
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 300
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 91 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 141
Query: 301 PGSTPTPSPAHLALPHNPG------------------------------SVTPISRDDAK 330
PG++ PA P G + T +++ +
Sbjct: 142 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 201
Query: 331 GLVQQSAR-----------------------QVWFSNRRAKWRREEKLRNQRR 360
L ++ R QVWFSNRRAKWRREEKLRNQRR
Sbjct: 202 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 254
>gi|45384210|ref|NP_990397.1| paired box protein Pax-6 [Gallus gallus]
gi|2576237|dbj|BAA23004.1| PAX6 protein [Gallus gallus]
gi|115501595|gb|ABI98845.1| paired box 6 [Columba livia]
gi|115501597|gb|ABI98846.1| paired box 6 transcript variant 1 [Columba livia]
Length = 436
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 96 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 153
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ PA P G S++
Sbjct: 154 -----DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNG 208
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 209 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 268
Query: 255 QVSSINR 261
QV NR
Sbjct: 269 QVWFSNR 275
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------ 319
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 149 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTN 202
Query: 320 ------------------------SVTPISRDDAKGLVQQSAR----------------- 338
+ T +++ + L ++ R
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRR 290
>gi|115501609|gb|ABI98852.1| paired box 6 transcript variant 7 [Columba livia]
Length = 386
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 84 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 137
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 138 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 184
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 185 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 225
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 79/158 (50%), Gaps = 48/158 (30%)
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 197
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 77 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 127
Query: 198 PGSTPTPSPAHLALPHNPG------SVTPISRDD-------------------------- 225
PG++ PA P G S++ D
Sbjct: 128 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 187
Query: 226 --AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 188 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 225
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 76/173 (43%), Gaps = 67/173 (38%)
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 300
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 77 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 127
Query: 301 PGSTPTPSPAHLALPHNPGSV------------------------------TPISRDDAK 330
PG++ PA P G T +++ +
Sbjct: 128 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 187
Query: 331 GLVQQSAR-----------------------QVWFSNRRAKWRREEKLRNQRR 360
L ++ R QVWFSNRRAKWRREEKLRNQRR
Sbjct: 188 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 240
>gi|115501613|gb|ABI98854.1| paired box 6 transcript variant 9 [Columba livia]
Length = 369
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 120
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 121 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 167
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 168 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 208
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 120
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
P G S++ D KEFERTH
Sbjct: 121 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 180
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 181 YPDVFARERLAAKIDLPEARIQVWFSNR 208
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 73/163 (44%), Gaps = 64/163 (39%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 120
Query: 311 HLALPHNPG------------------------------SVTPISRDDAKGLVQQSAR-- 338
P G + T +++ + L ++ R
Sbjct: 121 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 180
Query: 339 ---------------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 181 YPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 223
>gi|115501615|gb|ABI98855.1| paired box 6 transcript variant 10 [Columba livia]
Length = 363
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 120
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 121 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 167
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 168 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 208
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 120
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
P G S++ D KEFERTH
Sbjct: 121 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 180
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 181 YPDVFARERLAAKIDLPEARIQVWFSNR 208
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 73/163 (44%), Gaps = 64/163 (39%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 120
Query: 311 HLALPHNPG------------------------------SVTPISRDDAKGLVQQSAR-- 338
P G + T +++ + L ++ R
Sbjct: 121 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 180
Query: 339 ---------------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 181 YPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 223
>gi|115501607|gb|ABI98851.1| paired box 6 transcript variant 6 [Columba livia]
Length = 394
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 98 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 151
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 152 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 198
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 199 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 239
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 79/158 (50%), Gaps = 48/158 (30%)
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 197
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 91 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 141
Query: 198 PGSTPTPSPAHLALPHNPG------SVTPISRDD-------------------------- 225
PG++ PA P G S++ D
Sbjct: 142 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 201
Query: 226 --AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 202 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 239
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 77/173 (44%), Gaps = 67/173 (38%)
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 300
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 91 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 141
Query: 301 PGSTPTPSPAHLALPHNPG------------------------------SVTPISRDDAK 330
PG++ PA P G + T +++ +
Sbjct: 142 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 201
Query: 331 GLVQQSAR-----------------------QVWFSNRRAKWRREEKLRNQRR 360
L ++ R QVWFSNRRAKWRREEKLRNQRR
Sbjct: 202 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 254
>gi|115501611|gb|ABI98853.1| paired box 6 transcript variant 8 [Columba livia]
Length = 380
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 84 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 137
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 138 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 184
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 185 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 225
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 79/158 (50%), Gaps = 48/158 (30%)
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 197
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 77 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 127
Query: 198 PGSTPTPSPAHLALPHNPG------SVTPISRDD-------------------------- 225
PG++ PA P G S++ D
Sbjct: 128 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 187
Query: 226 --AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 188 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 225
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 76/173 (43%), Gaps = 67/173 (38%)
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 300
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 77 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWY 127
Query: 301 PGSTPTPSPAHLALPHNPGSV------------------------------TPISRDDAK 330
PG++ PA P G T +++ +
Sbjct: 128 PGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 187
Query: 331 GLVQQSAR-----------------------QVWFSNRRAKWRREEKLRNQRR 360
L ++ R QVWFSNRRAKWRREEKLRNQRR
Sbjct: 188 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 240
>gi|115501601|gb|ABI98848.1| paired box 6 transcript variant 3 [Columba livia]
Length = 422
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ PA P G S++
Sbjct: 140 -----DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------ 319
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTN 188
Query: 320 ------------------------SVTPISRDDAKGLVQQSAR----------------- 338
+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|115501619|gb|ABI98857.1| paired box 6 transcript variant 12 [Columba livia]
Length = 349
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 106
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 107 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 153
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 154 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 106
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
P G S++ D KEFERTH
Sbjct: 107 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 73/163 (44%), Gaps = 64/163 (39%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 106
Query: 311 HLALPHNPG------------------------------SVTPISRDDAKGLVQQSAR-- 338
P G + T +++ + L ++ R
Sbjct: 107 QDGCPQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 339 ---------------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 209
>gi|115501599|gb|ABI98847.1| paired box 6 transcript variant 2 [Columba livia]
Length = 430
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA P G S++ D
Sbjct: 159 KLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------ 319
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 149 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTN 202
Query: 320 ------------------------SVTPISRDDAKGLVQQSAR----------------- 338
+ T +++ + L ++ R
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRR 290
>gi|1352720|sp|P47238.1|PAX6_COTJA RecName: Full=Paired box protein Pax-6; AltName: Full=Pax-QNR
gi|481053|pir||S37689 paired box transcription factor Pax-6 - quail
gi|311772|emb|CAA49899.1| paired box and homeobox [Coturnix coturnix]
gi|115501603|gb|ABI98849.1| paired box 6 transcript variant 4 [Columba livia]
Length = 416
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ PA P G S++
Sbjct: 140 -----DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------ 319
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTN 188
Query: 320 ------------------------SVTPISRDDAKGLVQQSAR----------------- 338
+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|325973715|emb|CBX88048.1| Pax6 transcription factor [Scyliorhinus canicula]
Length = 497
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPGS+ P P
Sbjct: 195 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGAWGTRPGWYPGSSVPGQPN 248
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ INS NS +++QMRL+LKRKLQRNRTSFT E
Sbjct: 249 QDGCQQQEGGA-----------ENTNSINS--NSDDSDEAQMRLQLKRKLQRNRTSFTQE 295
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 296 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 336
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 148/350 (42%), Gaps = 63/350 (18%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 170 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 223
Query: 188 FNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERLADK 246
NGQ G W PG P S +P P D + + + + +D
Sbjct: 224 LNGQTGAWGTRPGWYPGSS-----VPGQPN-------QDGCQQQEGGAENTNSINSNSDD 271
Query: 247 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 306
+ R+Q+ ++ RN + ++Q A + E + YP
Sbjct: 272 SDEAQMRLQLK--RKLQRNRTSFTQEQIEALEKEFERTH--------------YP----- 310
Query: 307 PSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR--GSTG 364
V R AK + ++ QVWFSNRRAKWRREEKLRNQRR +T
Sbjct: 311 -------------DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTP 357
Query: 365 SVNSANTTTSTTALDHVP-PTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGMDSYNPSC 423
S +++ ST+ +P PT+ ++ L + ++ YS++P N
Sbjct: 358 SHIPISSSFSTSVYQPIPQPTTPVSSFATGAMLGRADTSLTNTYSALPPMPSFSMANNLS 417
Query: 424 LQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSS 473
+Q SYS M +S +Y P H PH +P G+S
Sbjct: 418 MQSPV--SSQTPSYSCMLPNSPSVNGRSYDTYTP-PHMQPHMNPQSMGTS 464
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 151 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 209
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPGS+
Sbjct: 210 QQMG------ADGMYDKLRMLNGQTGAWGTRPGWYPGSS 242
>gi|331271830|gb|AED02520.1| paired box 6 protein [Coturnix japonica]
Length = 281
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 62 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 115
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 116 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 162
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 163 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 203
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 33 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 86
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA P G S++ D
Sbjct: 87 KLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSDEAQMRL 146
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 147 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 203
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 90/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 18 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 76
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLALPHNPG------ 319
+Q ++ +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 77 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTN 130
Query: 320 ------------------------SVTPISRDDAKGLVQQSAR----------------- 338
+ T +++ + L ++ R
Sbjct: 131 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 190
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 191 LPEARIQVWFSNRRAKWRREEKLRNQRR 218
>gi|327259831|ref|XP_003214739.1| PREDICTED: paired box protein Pax-6-like isoform 5 [Anolis
carolinensis]
Length = 369
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 120
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 121 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 167
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 168 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 208
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 120
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
P G S++ D KEFERTH
Sbjct: 121 PDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 180
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 181 YPDVFARERLAAKIDLPEARIQVWFSNR 208
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 72/163 (44%), Gaps = 64/163 (39%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 67 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 120
Query: 311 HLALPHNPGSV------------------------------TPISRDDAKGLVQQSAR-- 338
P G T +++ + L ++ R
Sbjct: 121 PDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 180
Query: 339 ---------------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 181 YPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 223
>gi|327259829|ref|XP_003214738.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Anolis
carolinensis]
Length = 400
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 98 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 151
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 152 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 198
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 199 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 239
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 79/158 (50%), Gaps = 48/158 (30%)
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 197
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 91 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWY 141
Query: 198 PGSTPTPSPAHLALPHNPG------SVTPISRDD-------------------------- 225
PG++ PA P G S++ D
Sbjct: 142 PGTSVPGQPAPDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 201
Query: 226 --AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 202 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 239
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 76/173 (43%), Gaps = 67/173 (38%)
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 300
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 91 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWY 141
Query: 301 PGSTPTPSPAHLALPHNPGSV------------------------------TPISRDDAK 330
PG++ PA P G T +++ +
Sbjct: 142 PGTSVPGQPAPDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 201
Query: 331 GLVQQSAR-----------------------QVWFSNRRAKWRREEKLRNQRR 360
L ++ R QVWFSNRRAKWRREEKLRNQRR
Sbjct: 202 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 254
>gi|327259833|ref|XP_003214740.1| PREDICTED: paired box protein Pax-6-like isoform 6 [Anolis
carolinensis]
Length = 355
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 106
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 107 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 153
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 154 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 75/148 (50%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 106
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
P G S++ D KEFERTH
Sbjct: 107 PDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 72/163 (44%), Gaps = 64/163 (39%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ PA
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 106
Query: 311 HLALPHNPGSV------------------------------TPISRDDAKGLVQQSAR-- 338
P G T +++ + L ++ R
Sbjct: 107 PDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 339 ---------------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 209
>gi|327259825|ref|XP_003214736.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Anolis
carolinensis]
Length = 386
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 84 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 137
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 138 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 184
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 185 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 225
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 79/158 (50%), Gaps = 48/158 (30%)
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 197
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 77 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWY 127
Query: 198 PGSTPTPSPAHLALPHNPG------SVTPISRDD-------------------------- 225
PG++ PA P G S++ D
Sbjct: 128 PGTSVPGQPAPDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 187
Query: 226 --AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 188 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 225
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 76/173 (43%), Gaps = 67/173 (38%)
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY 300
++ PE VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WY
Sbjct: 77 RVATPEV---VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWY 127
Query: 301 PGSTPTPSPAHLALPHNPGSV------------------------------TPISRDDAK 330
PG++ PA P G T +++ +
Sbjct: 128 PGTSVPGQPAPDGCPQQEGGAENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIE 187
Query: 331 GLVQQSAR-----------------------QVWFSNRRAKWRREEKLRNQRR 360
L ++ R QVWFSNRRAKWRREEKLRNQRR
Sbjct: 188 ALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 240
>gi|327259827|ref|XP_003214737.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Anolis
carolinensis]
Length = 436
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA P G S++ D
Sbjct: 159 KLRMLNGQSGTWGTRPGWYPGTSVPGQPAPDGCPQQEGGAENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 149 QQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPAPDGCPQQEGGAENTN 202
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRR 290
>gi|207113487|gb|ACI23462.1| Pax6 variant [Pseudepidalea raddei]
Length = 393
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 85/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P P G S++ D
Sbjct: 145 KLRMLNGQTGTWGTRPGWYPGTSVPGQPTQDGCPQQEGGAENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIVQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLALPHNPGSV---- 321
+Q ++ +YDKLRM NGQ G W WYPG++ P P G
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTQDGCPQQEGGAENTN 188
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|151564048|gb|ABS17534.1| PAX6 [Pseudepidalea raddei]
Length = 422
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 91/187 (48%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ P P G S++
Sbjct: 140 -----DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTQDGCPQQEGGAENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +YDKLRM NGQ G W WYPG++ P P G
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTQDGCPQQEGGAENTN 188
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|327259835|ref|XP_003214741.1| PREDICTED: paired box protein Pax-6-like isoform 7 [Anolis
carolinensis]
Length = 430
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA P G S++ D
Sbjct: 159 KLRMLNGQSGTWGTRPGWYPGTSVPGQPAPDGCPQQEGGAENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 149 QQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPAPDGCPQQEGGAENTN 202
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRR 290
>gi|327259823|ref|XP_003214735.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Anolis
carolinensis]
Length = 422
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
P G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 PDGCPQQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ PA P G S++
Sbjct: 140 -----DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPAPDGCPQQEGGAENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 135 QQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPAPDGCPQQEGGAENTN 188
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|8132377|gb|AAF73268.1|AF154552_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q S + +YDKLRM NGQ G W WYPG+T P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGS------DGMYDKLRMLNGQTGTWGARPGWYPGTTVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QEGCQPQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 87/177 (49%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLA++K+Q S + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGS------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLAL------PHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG+T PA N S++ D
Sbjct: 145 KLRMLNGQTGTWGARPGWYPGTTVPGQPAQEGCQPQEGGAENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 93/208 (44%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL +D + + VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVNKIAQYKR-ECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLAL------PHNPG 319
+Q S+ +YDKLRM NGQ G W WYPG+T PA N
Sbjct: 135 QQMG------SDGMYDKLRMLNGQTGTWGARPGWYPGTTVPGQPAQEGCQPQEGGAENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|1527205|gb|AAB07733.1| XLPAX6 [Xenopus laevis]
Length = 407
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 109/162 (67%), Gaps = 26/162 (16%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q S + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 134 VSSINRVLRNLASEKQQMGS------DGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPA 187
Query: 58 HLAL-PHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
P G+ E+T+ I+S N +++QMRL+LKRKLQRNRTSFT
Sbjct: 188 QEGCQPQEGGA------------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQ 233
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 234 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLA++K+Q S + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGS------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLAL------PHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA N S++ D
Sbjct: 159 KLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 93/208 (44%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL +D + + VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVNKIAQYKR-ECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLAL------PHNPG 319
+Q S+ +YDKLRM NGQ G W WYPG++ PA N
Sbjct: 149 QQMG------SDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTN 202
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRR 290
>gi|51949781|gb|AAU14814.1| paired box 6 [Mustela putorius furo]
Length = 158
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 13 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 66
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 67 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 113
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 114 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 154
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 73/148 (49%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 13 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 66
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
G S++ D KEFERTH
Sbjct: 67 QDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 126
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 127 YPDVFARERLAAKIDLPEARIQVWFSNR 154
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 60/152 (39%), Gaps = 64/152 (42%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPG++ P
Sbjct: 13 VSSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 66
Query: 311 HLALPHNPG------------------------------SVTPISRDDAKGLVQQSAR-- 338
G + T +++ + L ++ R
Sbjct: 67 QDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 126
Query: 339 ---------------------QVWFSNRRAKW 349
QVWFSNRRAKW
Sbjct: 127 YPDVFARERLAAKIDLPEARIQVWFSNRRAKW 158
>gi|8132387|gb|AAF73273.1|AF154557_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q S + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGS------DGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QEGCQPQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLA++K+Q S + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGS------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLAL------PHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA N S++ D
Sbjct: 145 KLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 93/208 (44%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL +D + + VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVNKIAQYKR-ECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLAL------PHNPG 319
+Q S+ +YDKLRM NGQ G W WYPG++ PA N
Sbjct: 135 QQMG------SDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|8132383|gb|AAF73271.1|AF154555_1 paired domain transcription factor variant A [Xenopus laevis]
gi|8132385|gb|AAF73272.1|AF154556_1 paired domain transcription factor variant A [Xenopus laevis]
Length = 422
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q S + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGS------DGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QEGCQPQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLA++K+Q S + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGS------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLAL------PHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA N S++ D
Sbjct: 145 KLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 16/106 (15%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL +D + + VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVNKIAQYKR-ECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAH 311
+Q S+ +YDKLRM NGQ G W WYPG++ PA
Sbjct: 135 QQMG------SDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQ 174
>gi|786328|gb|AAB32671.1| Pax-6 [Rattus sp.]
gi|446399|prf||1911405A PAX-6 gene
Length = 269
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 27 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 80
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 81 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 127
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 128 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 168
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 2 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 55
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 56 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 115
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 116 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 168
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 81/188 (43%), Gaps = 68/188 (36%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL + I VSSINRVLRNLA++K+Q ++ +YDKLRM
Sbjct: 2 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMG------ADGMYDKLRM 55
Query: 291 FNGQPG-W----AWYPGSTPTPSPAHLALPHNPG-------------------------- 319
NGQ G W WYPG++ P G
Sbjct: 56 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 115
Query: 320 ----SVTPISRDDAKGLVQQSAR-----------------------QVWFSNRRAKWRRE 352
+ T +++ + L ++ R QVWFSNRRAKWRRE
Sbjct: 116 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRRE 175
Query: 353 EKLRNQRR 360
EKLRNQRR
Sbjct: 176 EKLRNQRR 183
>gi|148222787|ref|NP_001079413.1| paired box 6 [Xenopus laevis]
gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenopus laevis]
Length = 453
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q S + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 151 VSSINRVLRNLASEKQQMGS------DGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPA 204
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 205 QEGCQPQEGGA-----------ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 251
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 252 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLA++K+Q S + +YD
Sbjct: 122 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEKQQMGS------DGMYD 175
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLAL------PHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PA N S++ D
Sbjct: 176 KLRMLNGQTGTWGARPGWYPGTSVPGQPAQEGCQPQEGGAENTNSISSNGEDSDEAQMRL 235
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 236 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 16/106 (15%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL +D + + VSSINRVLRNLA++K
Sbjct: 107 PRVATPEVVNKIAQYKR-ECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLASEK 165
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAH 311
+Q S+ +YDKLRM NGQ G W WYPG++ PA
Sbjct: 166 QQMG------SDGMYDKLRMLNGQTGTWGARPGWYPGTSVPGQPAQ 205
>gi|348509488|ref|XP_003442280.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Oreochromis
niloticus]
Length = 457
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 159 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 212
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 213 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQE 259
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 260 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 300
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 134 PSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 187
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA---------- 226
NGQ G W WYPG++ P G S++ D
Sbjct: 188 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRLQLKR 247
Query: 227 ------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 248 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 300
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 115 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 173
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 174 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 206
>gi|348509486|ref|XP_003442279.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 151 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 204
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 205 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQE 251
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 252 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 126 PSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 179
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA---------- 226
NGQ G W WYPG++ P G S++ D
Sbjct: 180 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRLQLKR 239
Query: 227 ------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 107 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 165
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 166 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 198
>gi|432852507|ref|XP_004067282.1| PREDICTED: paired box protein Pax-6 isoform 2 [Oryzias latipes]
Length = 449
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 151 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 204
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 205 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQE 251
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 252 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 122 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 175
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 176 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRL 235
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 236 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 107 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 165
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 166 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 198
>gi|18138032|emb|CAC80518.1| paired box protein [Mus musculus]
Length = 309
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLALPHNPG 319
+Q ++ +YDKLRM NGQ G W WYPG++ P G
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEG 196
>gi|444301229|gb|AGD98725.1| paired box 6.1 [Callorhinchus milii]
Length = 436
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG + P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGAWGTRPGWYPGGSIPGQAN 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
GS E+T+ INS NS +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGSA-----------ENTNSINS--NSDDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 85/178 (47%), Gaps = 51/178 (28%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHL-------ALPHNPGSVTPISRDD------ 225
KLRM NGQ G W WYPG + P A+ N S+ S D
Sbjct: 159 KLRMLNGQTGAWGTRPGWYPGGS-IPGQANQDGCQQQEGSAENTNSINSNSDDSDEAQMR 217
Query: 226 ----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 218 LQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG +
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGAWGTRPGWYPGGS 181
>gi|432852509|ref|XP_004067283.1| PREDICTED: paired box protein Pax-6 isoform 3 [Oryzias latipes]
Length = 457
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 159 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 212
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 213 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQE 259
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 260 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 300
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 134 PSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 187
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA---------- 226
NGQ G W WYPG++ P G S++ D
Sbjct: 188 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRLQLKR 247
Query: 227 ------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 248 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 300
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 115 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 173
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 174 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 206
>gi|432852505|ref|XP_004067281.1| PREDICTED: paired box protein Pax-6 isoform 1 [Oryzias latipes]
gi|3914281|sp|O73917.1|PAX6_ORYLA RecName: Full=Paired box protein Pax-6
gi|3115324|emb|CAA04395.1| Pax6 [Oryzias latipes]
Length = 437
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 110 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 163
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 164 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRL 223
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 224 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 186
>gi|348509484|ref|XP_003442278.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Oreochromis
niloticus]
Length = 437
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 114 PSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 167
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA---------- 226
NGQ G W WYPG++ P G S++ D
Sbjct: 168 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQMRLQLKR 227
Query: 227 ------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 228 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 186
>gi|2369655|emb|CAA68838.1| PAX-6 protein [Astyanax mexicanus]
Length = 459
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 116/183 (63%), Gaps = 26/183 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 161 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 214
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 215 QDGCQQSDGGA-----------ENTNSISS--NGEDSEEAQMRLQLKRKLQRNRTSFTQE 261
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLAAQKEQQASAHN 175
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R + Q+ A+N
Sbjct: 262 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANN 321
Query: 176 QTS 178
TS
Sbjct: 322 STS 324
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 99/202 (49%), Gaps = 52/202 (25%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + +
Sbjct: 130 QFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DG 182
Query: 181 VYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA--- 226
+Y+KLRM NGQ G W WYPG++ P + G S++ D
Sbjct: 183 MYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTNSISSNGEDSEEAQ 242
Query: 227 -------------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 243 MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 302
Query: 262 --VLRNLAAQKEQQASAHNQTS 281
R + Q+ A+N TS
Sbjct: 303 RAKWRREEKLRNQRRQANNSTS 324
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 110/261 (42%), Gaps = 96/261 (36%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 117 PRVATPEVVGKIAQFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 175
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +Y+KLRM NGQ G W WYPG++ P + G
Sbjct: 176 QQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTN 229
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 230 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 289
Query: 339 ------QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
QVWFSNRRAKWRREEKLRNQRR AN +TS H+P +S
Sbjct: 290 LPEARIQVWFSNRRAKWRREEKLRNQRR-------QANNSTS-----HIPISS------- 330
Query: 393 RLPLNPGGFNPSSMYSSIPQP 413
F+ +S+Y IPQP
Sbjct: 331 -------SFS-TSVYQPIPQP 343
>gi|306754627|gb|ADN04686.1| Pax6 [Rattus norvegicus]
Length = 434
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G + E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|2369651|emb|CAA68835.1| PAX-6 protein [Astyanax mexicanus]
gi|2369657|emb|CAA68839.1| PAX-6 protein [Astyanax mexicanus]
gi|50082925|gb|AAT70088.1| Pax6 homeobox protein [Astyanax mexicanus]
Length = 437
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 116/183 (63%), Gaps = 26/183 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQSDGGA-----------ENTNSISS--NGEDSEEAQMRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLAAQKEQQASAHN 175
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R + Q+ A+N
Sbjct: 240 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANN 299
Query: 176 QTS 178
TS
Sbjct: 300 STS 302
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 99/202 (49%), Gaps = 52/202 (25%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + +
Sbjct: 108 QFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DG 160
Query: 181 VYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA--- 226
+Y+KLRM NGQ G W WYPG++ P + G S++ D
Sbjct: 161 MYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTNSISSNGEDSEEAQ 220
Query: 227 -------------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Query: 262 --VLRNLAAQKEQQASAHNQTS 281
R + Q+ A+N TS
Sbjct: 281 RAKWRREEKLRNQRRQANNSTS 302
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 110/261 (42%), Gaps = 96/261 (36%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVGKIAQFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +Y+KLRM NGQ G W WYPG++ P + G
Sbjct: 154 QQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTN 207
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 208 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 339 ------QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
QVWFSNRRAKWRREEKLRNQRR AN +TS H+P +S
Sbjct: 268 LPEARIQVWFSNRRAKWRREEKLRNQRR-------QANNSTS-----HIPISS------- 308
Query: 393 RLPLNPGGFNPSSMYSSIPQP 413
F+ +S+Y IPQP
Sbjct: 309 -------SFS-TSVYQPIPQP 321
>gi|44922124|gb|AAS48919.1| paired box 6 isoform 5a [Rattus norvegicus]
gi|44922126|gb|AAS48920.1| paired box 6 isoform 5a [Rattus norvegicus]
Length = 436
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G + E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|42592306|emb|CAF29075.1| putative pax6 isoform 5a [Rattus norvegicus]
Length = 436
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTCPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G + E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTCPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTCPGWYPGTS 181
>gi|149022829|gb|EDL79723.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
gi|149022831|gb|EDL79725.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
Length = 470
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 168 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 221
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G + E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 222 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 268
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 269 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 309
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 143 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 196
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 197 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRLQLKR 256
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 257 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 309
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 124 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 182
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 183 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 215
>gi|149022827|gb|EDL79721.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
gi|149022830|gb|EDL79724.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
Length = 456
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 154 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 207
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G + E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 208 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 254
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 255 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 295
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 129 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 182
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 183 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRLQLKR 242
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 243 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 295
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 110 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 168
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 169 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 201
>gi|444732073|gb|ELW72394.1| Paired box protein Pax-6 [Tupaia chinensis]
Length = 601
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 90/187 (48%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ P G S++
Sbjct: 140 -----DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|2369654|emb|CAA68837.1| PAX-6 protein [Astyanax mexicanus]
Length = 433
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 116/183 (63%), Gaps = 26/183 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 135 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 188
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 189 QDGCQQSDGGA-----------ENTNSISS--NGEDSEEAQMRLQLKRKLQRNRTSFTQE 235
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLAAQKEQQASAHN 175
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R + Q+ A+N
Sbjct: 236 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANN 295
Query: 176 QTS 178
TS
Sbjct: 296 STS 298
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 99/202 (49%), Gaps = 52/202 (25%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + +
Sbjct: 104 QFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DG 156
Query: 181 VYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA--- 226
+Y+KLRM NGQ G W WYPG++ P + G S++ D
Sbjct: 157 MYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTNSISSNGEDSEEAQ 216
Query: 227 -------------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 217 MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 276
Query: 262 --VLRNLAAQKEQQASAHNQTS 281
R + Q+ A+N TS
Sbjct: 277 RAKWRREEKLRNQRRQANNSTS 298
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 110/261 (42%), Gaps = 96/261 (36%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 91 PRVATPEVVGKIAQFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 149
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +Y+KLRM NGQ G W WYPG++ P + G
Sbjct: 150 QQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTN 203
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 204 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 263
Query: 339 ------QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
QVWFSNRRAKWRREEKLRNQRR AN +TS H+P +S
Sbjct: 264 LPEARIQVWFSNRRAKWRREEKLRNQRR-------QANNSTS-----HIPISS------- 304
Query: 393 RLPLNPGGFNPSSMYSSIPQP 413
F+ +S+Y IPQP
Sbjct: 305 -------SFS-TSVYQPIPQP 317
>gi|6981334|ref|NP_037133.1| paired box protein Pax-6 [Rattus norvegicus]
gi|51704214|sp|P63016.1|PAX6_RAT RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|1568653|gb|AAB09042.1| paired-box/homeobox protein [Rattus norvegicus]
gi|118764376|gb|AAI28742.1| Paired box 6 [Rattus norvegicus]
Length = 422
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G + E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|2369653|emb|CAA68836.1| PAX-6 protein [Astyanax mexicanus]
Length = 441
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 116/183 (63%), Gaps = 26/183 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 143 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 196
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N E++QMRL+LKRKLQRNRTSFT E
Sbjct: 197 QDGCQQSDGGA-----------ENTNSISS--NGEDSEEAQMRLQLKRKLQRNRTSFTQE 243
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLAAQKEQQASAHN 175
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R + Q+ A+N
Sbjct: 244 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQANN 303
Query: 176 QTS 178
TS
Sbjct: 304 STS 306
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 99/202 (49%), Gaps = 52/202 (25%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + +
Sbjct: 112 QFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DG 164
Query: 181 VYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA--- 226
+Y+KLRM NGQ G W WYPG++ P + G S++ D
Sbjct: 165 MYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTNSISSNGEDSEEAQ 224
Query: 227 -------------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 225 MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 284
Query: 262 --VLRNLAAQKEQQASAHNQTS 281
R + Q+ A+N TS
Sbjct: 285 RAKWRREEKLRNQRRQANNSTS 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 110/261 (42%), Gaps = 96/261 (36%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 99 PRVATPEVVGKIAQFKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 157
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGSV---- 321
+Q + + +Y+KLRM NGQ G W WYPG++ P + G
Sbjct: 158 QQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGAENTN 211
Query: 322 --------------------------TPISRDDAKGLVQQSAR----------------- 338
T +++ + L ++ R
Sbjct: 212 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 271
Query: 339 ------QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
QVWFSNRRAKWRREEKLRNQRR AN +TS H+P +S
Sbjct: 272 LPEARIQVWFSNRRAKWRREEKLRNQRR-------QANNSTS-----HIPISS------- 312
Query: 393 RLPLNPGGFNPSSMYSSIPQP 413
F+ +S+Y IPQP
Sbjct: 313 -------SFS-TSVYQPIPQP 325
>gi|348557450|ref|XP_003464532.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Cavia
porcellus]
Length = 436
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGARPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGA-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGS---VTPISR-----DDA---- 226
KLRM NGQ G W WYPG++ P G+ IS D+A
Sbjct: 159 KLRMLNGQTGSWGARPGWYPGTSVPGQPTQDGCQQQEGAGENTNSISSNGEDSDEAQMRL 218
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGARPGWYPGTS 181
>gi|348557448|ref|XP_003464531.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Cavia
porcellus]
Length = 422
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGARPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGA-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPGS---VTPISR-----DDA---- 226
KLRM NGQ G W WYPG++ P G+ IS D+A
Sbjct: 145 KLRMLNGQTGSWGARPGWYPGTSVPGQPTQDGCQQQEGAGENTNSISSNGEDSDEAQMRL 204
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGARPGWYPGTS 167
>gi|269200156|gb|ACZ28705.1| paired box protein 6 isoform c [Homo sapiens]
Length = 401
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|355566635|gb|EHH23014.1| hypothetical protein EGK_06384 [Macaca mulatta]
Length = 361
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 75 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 128
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 129 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 175
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 176 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 216
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 50 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 103
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 104 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 163
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 164 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 216
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 31 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 89
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 90 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 122
>gi|34364871|emb|CAE45868.1| hypothetical protein [Homo sapiens]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|4580424|ref|NP_001595.2| paired box protein Pax-6 isoform b [Homo sapiens]
gi|386642911|ref|NP_001245391.1| paired box protein Pax-6 isoform b [Homo sapiens]
gi|386642913|ref|NP_001245392.1| paired box protein Pax-6 isoform b [Homo sapiens]
gi|301764208|ref|XP_002917525.1| PREDICTED: paired box protein Pax-6-like [Ailuropoda melanoleuca]
gi|390470364|ref|XP_002755188.2| PREDICTED: paired box protein Pax-6 isoform 1 [Callithrix jacchus]
gi|390470366|ref|XP_003734277.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|390470368|ref|XP_003734278.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|397520715|ref|XP_003830457.1| PREDICTED: paired box protein Pax-6 isoform 4 [Pan paniscus]
gi|397520717|ref|XP_003830458.1| PREDICTED: paired box protein Pax-6 isoform 5 [Pan paniscus]
gi|397520719|ref|XP_003830459.1| PREDICTED: paired box protein Pax-6 isoform 6 [Pan paniscus]
gi|403254508|ref|XP_003920007.1| PREDICTED: paired box protein Pax-6 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403254510|ref|XP_003920008.1| PREDICTED: paired box protein Pax-6 isoform 5 [Saimiri boliviensis
boliviensis]
gi|403254512|ref|XP_003920009.1| PREDICTED: paired box protein Pax-6 isoform 6 [Saimiri boliviensis
boliviensis]
gi|410973488|ref|XP_003993181.1| PREDICTED: paired box protein Pax-6 isoform 4 [Felis catus]
gi|410973490|ref|XP_003993182.1| PREDICTED: paired box protein Pax-6 isoform 5 [Felis catus]
gi|410973492|ref|XP_003993183.1| PREDICTED: paired box protein Pax-6 isoform 6 [Felis catus]
gi|410973494|ref|XP_003993184.1| PREDICTED: paired box protein Pax-6 isoform 7 [Felis catus]
gi|426367844|ref|XP_004050931.1| PREDICTED: paired box protein Pax-6 isoform 4 [Gorilla gorilla
gorilla]
gi|426367846|ref|XP_004050932.1| PREDICTED: paired box protein Pax-6 isoform 5 [Gorilla gorilla
gorilla]
gi|426367850|ref|XP_004050934.1| PREDICTED: paired box protein Pax-6 isoform 7 [Gorilla gorilla
gorilla]
gi|326205307|dbj|BAJ84032.1| paired box protein Pax-6 [Homo sapiens]
gi|326205309|dbj|BAJ84033.1| paired box protein Pax-6 [Homo sapiens]
gi|326205311|dbj|BAJ84034.1| paired box protein Pax-6 [Homo sapiens]
gi|380813236|gb|AFE78492.1| paired box protein Pax-6 isoform b [Macaca mulatta]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|410045098|ref|XP_003954413.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pan
troglodytes]
Length = 430
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 128 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 181
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 182 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 228
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 229 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 269
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 103 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 156
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 157 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 216
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 217 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 269
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 84 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 142
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 143 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 175
>gi|7305369|ref|NP_038655.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|346644677|ref|NP_001231127.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|346644705|ref|NP_001231129.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|354470765|ref|XP_003497615.1| PREDICTED: paired box protein Pax-6 isoform 2 [Cricetulus griseus]
gi|1405744|emb|CAA45379.1| Pax-6 (paired box containing gene) [Mus musculus]
gi|15277449|gb|AAH11272.1| Paired box gene 6 [Mus musculus]
gi|18138034|emb|CAC80519.1| paired box protein [Mus musculus]
gi|148695799|gb|EDL27746.1| paired box gene 6, isoform CRA_b [Mus musculus]
gi|148695802|gb|EDL27749.1| paired box gene 6, isoform CRA_b [Mus musculus]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|148222721|ref|NP_001091013.1| paired box gene 6 [Canis lupus familiaris]
gi|344281158|ref|XP_003412347.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Loxodonta
africana]
gi|426245242|ref|XP_004016422.1| PREDICTED: paired box protein Pax-6 isoform 5 [Ovis aries]
gi|426245244|ref|XP_004016423.1| PREDICTED: paired box protein Pax-6 isoform 6 [Ovis aries]
gi|426245246|ref|XP_004016424.1| PREDICTED: paired box protein Pax-6 isoform 7 [Ovis aries]
gi|426245248|ref|XP_004016425.1| PREDICTED: paired box protein Pax-6 isoform 8 [Ovis aries]
gi|134289886|gb|ABO70134.1| PAX6 [Canis lupus familiaris]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|62087934|dbj|BAD92414.1| paired box gene 6 isoform a variant [Homo sapiens]
Length = 385
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 83 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 136
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 137 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 183
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 184 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 224
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 90/187 (48%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 45 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 102
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ P G S++
Sbjct: 103 -----DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNG 157
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 158 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 217
Query: 255 QVSSINR 261
QV NR
Sbjct: 218 QVWFSNR 224
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 39 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 97
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 98 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 130
>gi|440910049|gb|ELR59881.1| Paired box protein Pax-6, partial [Bos grunniens mutus]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|402893913|ref|XP_003910125.1| PREDICTED: paired box protein Pax-6 isoform 4 [Papio anubis]
gi|402893915|ref|XP_003910126.1| PREDICTED: paired box protein Pax-6 isoform 5 [Papio anubis]
gi|402893919|ref|XP_003910128.1| PREDICTED: paired box protein Pax-6 isoform 7 [Papio anubis]
gi|402893921|ref|XP_003910129.1| PREDICTED: paired box protein Pax-6 isoform 8 [Papio anubis]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|355752241|gb|EHH56361.1| hypothetical protein EGM_05752, partial [Macaca fascicularis]
Length = 436
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|344245472|gb|EGW01576.1| Paired box protein Pax-6 [Cricetulus griseus]
Length = 544
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 216 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 269
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 270 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 316
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 317 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 357
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 187 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 240
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 241 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 300
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 301 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 357
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 172 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 230
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 231 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 263
>gi|148695801|gb|EDL27748.1| paired box gene 6, isoform CRA_d [Mus musculus]
Length = 499
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 197 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 250
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 251 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 297
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 298 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 338
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 172 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 225
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 226 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 285
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 286 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 338
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 153 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 211
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 212 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 244
>gi|332211111|ref|XP_003254659.1| PREDICTED: paired box protein Pax-6 [Nomascus leucogenys]
Length = 458
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 156 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 209
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 210 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 256
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 257 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 297
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 127 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 180
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 181 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 240
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 241 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 297
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 112 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 170
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 171 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 203
>gi|281350934|gb|EFB26518.1| hypothetical protein PANDA_005849 [Ailuropoda melanoleuca]
Length = 434
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 132 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 185
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 186 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 232
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 233 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 273
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 103 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 156
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 157 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 216
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 217 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 273
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 88 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 146
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 147 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 179
>gi|193786700|dbj|BAG52023.1| unnamed protein product [Homo sapiens]
Length = 422
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 90/187 (48%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPIS 222
+ +YDKLRM NGQ G W WYPG++ P G S++
Sbjct: 140 -----DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|402893907|ref|XP_003910122.1| PREDICTED: paired box protein Pax-6 isoform 1 [Papio anubis]
gi|402893909|ref|XP_003910123.1| PREDICTED: paired box protein Pax-6 isoform 2 [Papio anubis]
gi|402893911|ref|XP_003910124.1| PREDICTED: paired box protein Pax-6 isoform 3 [Papio anubis]
gi|402893917|ref|XP_003910127.1| PREDICTED: paired box protein Pax-6 isoform 6 [Papio anubis]
Length = 422
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|99028934|ref|NP_001035735.1| paired box protein Pax-6 [Bos taurus]
gi|344281156|ref|XP_003412346.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Loxodonta
africana]
gi|426245234|ref|XP_004016418.1| PREDICTED: paired box protein Pax-6 isoform 1 [Ovis aries]
gi|426245236|ref|XP_004016419.1| PREDICTED: paired box protein Pax-6 isoform 2 [Ovis aries]
gi|426245238|ref|XP_004016420.1| PREDICTED: paired box protein Pax-6 isoform 3 [Ovis aries]
gi|426245240|ref|XP_004016421.1| PREDICTED: paired box protein Pax-6 isoform 4 [Ovis aries]
gi|119390857|sp|Q1LZF1.1|PAX6_BOVIN RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|94534889|gb|AAI16039.1| Paired box 6 [Bos taurus]
gi|296479736|tpg|DAA21851.1| TPA: paired box protein Pax-6 [Bos taurus]
Length = 422
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|383296|prf||1902328A PAX6 gene
Length = 422
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|4505615|ref|NP_000271.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|189083681|ref|NP_001121084.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|346644712|ref|NP_001231130.1| paired box protein Pax-6 isoform 2 [Mus musculus]
gi|346644716|ref|NP_001231131.1| paired box protein Pax-6 isoform 2 [Mus musculus]
gi|346644858|ref|NP_001231101.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
gi|346644860|ref|NP_001231102.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
gi|386642915|ref|NP_001245393.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|386642917|ref|NP_001245394.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|388452718|ref|NP_001253186.1| paired box protein Pax-6 [Macaca mulatta]
gi|354470763|ref|XP_003497614.1| PREDICTED: paired box protein Pax-6 isoform 1 [Cricetulus griseus]
gi|390470358|ref|XP_003734275.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|390470360|ref|XP_002755189.2| PREDICTED: paired box protein Pax-6 isoform 2 [Callithrix jacchus]
gi|390470362|ref|XP_003734276.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|395815485|ref|XP_003781257.1| PREDICTED: paired box protein Pax-6 [Otolemur garnettii]
gi|397520709|ref|XP_003830454.1| PREDICTED: paired box protein Pax-6 isoform 1 [Pan paniscus]
gi|397520711|ref|XP_003830455.1| PREDICTED: paired box protein Pax-6 isoform 2 [Pan paniscus]
gi|397520713|ref|XP_003830456.1| PREDICTED: paired box protein Pax-6 isoform 3 [Pan paniscus]
gi|403254502|ref|XP_003920004.1| PREDICTED: paired box protein Pax-6 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403254504|ref|XP_003920005.1| PREDICTED: paired box protein Pax-6 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403254506|ref|XP_003920006.1| PREDICTED: paired box protein Pax-6 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410973482|ref|XP_003993178.1| PREDICTED: paired box protein Pax-6 isoform 1 [Felis catus]
gi|410973484|ref|XP_003993179.1| PREDICTED: paired box protein Pax-6 isoform 2 [Felis catus]
gi|410973486|ref|XP_003993180.1| PREDICTED: paired box protein Pax-6 isoform 3 [Felis catus]
gi|426367838|ref|XP_004050928.1| PREDICTED: paired box protein Pax-6 isoform 1 [Gorilla gorilla
gorilla]
gi|426367840|ref|XP_004050929.1| PREDICTED: paired box protein Pax-6 isoform 2 [Gorilla gorilla
gorilla]
gi|426367842|ref|XP_004050930.1| PREDICTED: paired box protein Pax-6 isoform 3 [Gorilla gorilla
gorilla]
gi|426367848|ref|XP_004050933.1| PREDICTED: paired box protein Pax-6 isoform 6 [Gorilla gorilla
gorilla]
gi|6174889|sp|P26367.2|PAX6_HUMAN RecName: Full=Paired box protein Pax-6; AltName: Full=Aniridia type
II protein; AltName: Full=Oculorhombin
gi|51702790|sp|P63015.1|PAX6_MOUSE RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|189633|gb|AAA36416.1| paired-box protein [Homo sapiens]
gi|1405745|emb|CAA45380.1| Pax-6 (paired box containing gene) [Mus musculus]
gi|15080397|gb|AAH11953.1| Paired box 6 [Homo sapiens]
gi|15422113|gb|AAK95849.1| paired box protein PAX6 [Homo sapiens]
gi|22477504|gb|AAH36957.1| Pax6 protein [Mus musculus]
gi|51872083|gb|AAU12168.1| paired box gene 6 isoform a [Homo sapiens]
gi|90076866|dbj|BAE88113.1| unnamed protein product [Macaca fascicularis]
gi|123981066|gb|ABM82362.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
gi|123995873|gb|ABM85538.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
gi|148695798|gb|EDL27745.1| paired box gene 6, isoform CRA_a [Mus musculus]
gi|261860050|dbj|BAI46547.1| paired box 6 [synthetic construct]
gi|380813234|gb|AFE78491.1| paired box protein Pax-6 isoform a [Macaca mulatta]
Length = 422
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|346644870|ref|NP_001231107.1| paired box protein Pax-6 isoform 2 [Sus scrofa]
Length = 355
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 106
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 107 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 153
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 154 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 73/148 (49%), Gaps = 45/148 (30%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 53 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 106
Query: 208 HLALPHNPG------SVTPISRDD----------------------------AKEFERTH 233
G S++ D KEFERTH
Sbjct: 107 QDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 166
Query: 234 YPDVFARERLADKIGLPEARIQVSSINR 261
YPDVFARERLA KI LPEARIQV NR
Sbjct: 167 YPDVFARERLAAKIDLPEARIQVWFSNR 194
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 11/54 (20%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
VSSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 53 VSSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 100
>gi|119588639|gb|EAW68233.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
sapiens]
gi|119588640|gb|EAW68234.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
sapiens]
Length = 456
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 154 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 207
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 208 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 254
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 255 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 295
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 125 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 178
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 179 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 238
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 239 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 295
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 110 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 168
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 169 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 201
>gi|189353|gb|AAA59962.1| oculorhombin [Homo sapiens]
Length = 422
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|410929045|ref|XP_003977910.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Takifugu
rubripes]
Length = 388
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 106/159 (66%), Gaps = 24/159 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++Q+RL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQLRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV S
Sbjct: 240 QIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVMSF 278
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 85/175 (48%), Gaps = 49/175 (28%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 110 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 163
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 164 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQLRL 223
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
KEFERTHYPDVFARERLA KI LPEARIQV S
Sbjct: 224 QLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVMSF 278
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 186
>gi|26389393|dbj|BAC25729.1| unnamed protein product [Mus musculus]
Length = 422
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|119588642|gb|EAW68236.1| paired box gene 6 (aniridia, keratitis), isoform CRA_c [Homo
sapiens]
Length = 470
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 168 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 221
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 222 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 268
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 269 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 309
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 139 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 192
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 193 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 252
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 253 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 309
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 124 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 182
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 183 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 215
>gi|410929049|ref|XP_003977912.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Takifugu
rubripes]
Length = 456
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 159 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 212
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++Q+RL+LKRKLQRNRTSFT E
Sbjct: 213 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQLRLQLKRKLQRNRTSFTQE 259
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 260 QIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 300
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 130 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 183
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 184 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQLRL 243
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 244 QLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 300
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 115 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 173
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 174 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 206
>gi|3402201|emb|CAA16493.1| PAX6 [Takifugu rubripes]
Length = 409
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 140 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 193
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++Q+RL+LKRKLQRNRTSFT E
Sbjct: 194 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQLRLQLKRKLQRNRTSFTQE 240
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 241 QIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 281
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 85/173 (49%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 115 PSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 168
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA---------- 226
NGQ G W WYPG++ P G S++ D
Sbjct: 169 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQLRLQLKR 228
Query: 227 ------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 229 KLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 281
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 96 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 154
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 155 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 187
>gi|18138028|emb|CAC80516.1| paired box protein [Mus musculus]
Length = 436
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFPNR 275
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFPNR 275
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|410929043|ref|XP_003977909.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Takifugu
rubripes]
Length = 436
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++Q+RL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQLRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 QIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 110 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 163
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 164 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQLRL 223
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 224 QLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 186
>gi|8132381|gb|AAF73270.1| paired domain transcription factor variant B [Xenopus laevis]
Length = 390
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 134 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 85/179 (47%), Gaps = 53/179 (29%)
Query: 130 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
HY P +FA R+RL + I VSSINRVLRNLA+ K+Q S E +
Sbjct: 103 HYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGS------EGM 156
Query: 182 YDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPGSVTPISRDD----- 225
YDKLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 157 YDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQM 216
Query: 226 -----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 217 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 90 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPG 319
+Q S E +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 149 QQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 202
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRR 290
>gi|410929047|ref|XP_003977911.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Takifugu
rubripes]
Length = 448
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 151 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 204
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++Q+RL+LKRKLQRNRTSFT E
Sbjct: 205 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQLRLQLKRKLQRNRTSFTQE 251
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 252 QIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 122 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 175
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 176 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQLRL 235
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 236 QLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 107 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 165
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 166 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 198
>gi|47218729|emb|CAG05701.1| unnamed protein product [Tetraodon nigroviridis]
Length = 417
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G+ E+T+ I+S N E++Q+RL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQQQDGA-----------GENTNSISS--NGEDSEETQLRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL ++ I + VSSINRVLRNLA++K+Q + + +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDDA------ 226
KLRM NGQ G W WYPG++ P G S++ D
Sbjct: 145 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQDGAGENTNSISSNGEDSEETQLRL 204
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQRNRTSFTQEQIENLEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL ++ I + VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLSEGICTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTS 167
>gi|288557282|ref|NP_001165666.1| paired box protein Pax-6 [Xenopus laevis]
gi|8132379|gb|AAF73269.1|AF154553_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 85/179 (47%), Gaps = 53/179 (29%)
Query: 130 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
HY P +FA R+RL + I VSSINRVLRNLA+ K+Q S E +
Sbjct: 89 HYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGS------EGM 142
Query: 182 YDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPGSVTPISRDD----- 225
YDKLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 143 YDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQM 202
Query: 226 -----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 203 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 76 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPA------HLALPHNPG 319
+Q SE +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 135 QQMG------SEGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|269931719|gb|ACZ54379.1| paired box 6 [Monodelphis domestica]
Length = 282
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 124 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 177
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 178 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 224
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 225 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 265
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 95 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 148
Query: 184 KLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 149 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQMRL 208
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 209 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 265
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 80 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 138
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGS------TPTPSPAHLALPHNPG 319
+Q + + +YDKLRM NGQ G W WYPG+ TP N
Sbjct: 139 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTN 192
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 193 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 252
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 253 LPEARIQVWFSNRRAKWRREEKLRNQRR 280
>gi|109288051|gb|ABG29069.1| transcription factor Pax6 [Pleurodeles waltl]
Length = 214
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 66 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 119
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 120 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 166
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 167 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 207
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 37 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 90
Query: 184 KLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 91 KLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQMRL 150
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 151 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 207
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 83/200 (41%), Gaps = 69/200 (34%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 22 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 80
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTPSPAHL--ALPHNPG 319
+Q ++ +YDKLRM NGQ G W WYPG++ PTP N
Sbjct: 81 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTN 134
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 135 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 194
Query: 339 ------QVWFSNRRAKWRRE 352
QVWFSNRRAKWRRE
Sbjct: 195 LPEARIQVWFSNRRAKWRRE 214
>gi|328719783|ref|XP_003246858.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
pisum]
gi|328719787|ref|XP_003246860.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Acyrthosiphon
pisum]
Length = 613
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 111/192 (57%), Gaps = 36/192 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAH----NQTSETVYDKLRMFNGQPGWA--------WYP-- 48
VSSINRVLRNLAAQK+QQA A +++ VYDKLR+ NGQ A WYP
Sbjct: 188 VSSINRVLRNLAAQKDQQAPASVSPTCSSTDAVYDKLRLLNGQAAAAGTWPRPNPWYPPA 247
Query: 49 -GSTP--PPSPAHLALPHNPGSVTPISRDDAK---------EHESTSDINSEPN------ 90
G P P P P+ D K E+ + I N
Sbjct: 248 SGDNPFGPLQPTGRLSPNAANCTVLPDILDKKVLDLDGGMGSDETCTSIGDNSNHDGSLI 307
Query: 91 ----SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
SA++D Q RLRLKRKLQRNRTSFTN+QIDSLEKEFERTHYPDVFARERLA KIGL
Sbjct: 308 GGTTGSANDDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGL 367
Query: 147 PEARIQVSSINR 158
PEARIQV NR
Sbjct: 368 PEARIQVWFSNR 379
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 137 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQEGVCSNDNIPSVSSINRVL 195
Query: 161 RNLAAQKEQQASAH----NQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAH-LALPHNP 215
RNLAAQK+QQA A +++ VYDKLR+ NGQ A G+ P P+P + A NP
Sbjct: 196 RNLAAQKDQQAPASVSPTCSSTDAVYDKLRLLNGQAAAA---GTWPRPNPWYPPASGDNP 252
Query: 216 -GSVTPISRDDAKEFERTHYPDVFARE--RLADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
G + P R T PD+ ++ L +G E + + +L
Sbjct: 253 FGPLQPTGRLSPNAANCTVLPDILDKKVLDLDGGMGSDETCTSIGDNSNHDGSLIGGTTG 312
Query: 273 QASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGL 332
A+ +Q + KL Q + H P V R K
Sbjct: 313 SANDDDQARLRLKRKL-----QRNRTSFTNDQIDSLEKEFERTHYP-DVFARERLAGKIG 366
Query: 333 VQQSARQVWFSNRRAKWRREEKLRNQRR 360
+ ++ QVWFSNRRAKWRREEKLR QRR
Sbjct: 367 LPEARIQVWFSNRRAKWRREEKLRTQRR 394
>gi|328719785|ref|XP_003246859.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
pisum]
Length = 594
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 111/192 (57%), Gaps = 36/192 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAH----NQTSETVYDKLRMFNGQPGWA--------WYP-- 48
VSSINRVLRNLAAQK+QQA A +++ VYDKLR+ NGQ A WYP
Sbjct: 169 VSSINRVLRNLAAQKDQQAPASVSPTCSSTDAVYDKLRLLNGQAAAAGTWPRPNPWYPPA 228
Query: 49 -GSTP--PPSPAHLALPHNPGSVTPISRDDAK---------EHESTSDINSEPN------ 90
G P P P P+ D K E+ + I N
Sbjct: 229 SGDNPFGPLQPTGRLSPNAANCTVLPDILDKKVLDLDGGMGSDETCTSIGDNSNHDGSLI 288
Query: 91 ----SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
SA++D Q RLRLKRKLQRNRTSFTN+QIDSLEKEFERTHYPDVFARERLA KIGL
Sbjct: 289 GGTTGSANDDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGL 348
Query: 147 PEARIQVSSINR 158
PEARIQV NR
Sbjct: 349 PEARIQVWFSNR 360
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 121/268 (45%), Gaps = 22/268 (8%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 118 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQEGVCSNDNIPSVSSINRVL 176
Query: 161 RNLAAQKEQQASAH----NQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAH-LALPHNP 215
RNLAAQK+QQA A +++ VYDKLR+ NGQ A G+ P P+P + A NP
Sbjct: 177 RNLAAQKDQQAPASVSPTCSSTDAVYDKLRLLNGQAAAA---GTWPRPNPWYPPASGDNP 233
Query: 216 -GSVTPISRDDAKEFERTHYPDVFARE--RLADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
G + P R T PD+ ++ L +G E + + +L
Sbjct: 234 FGPLQPTGRLSPNAANCTVLPDILDKKVLDLDGGMGSDETCTSIGDNSNHDGSLIGGTTG 293
Query: 273 QASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGL 332
A+ +Q + KL Q + H P V R K
Sbjct: 294 SANDDDQARLRLKRKL-----QRNRTSFTNDQIDSLEKEFERTHYP-DVFARERLAGKIG 347
Query: 333 VQQSARQVWFSNRRAKWRREEKLRNQRR 360
+ ++ QVWFSNRRAKWRREEKLR QRR
Sbjct: 348 LPEARIQVWFSNRRAKWRREEKLRTQRR 375
>gi|61189938|gb|AAX39333.1| paired box gene 6 [Ovis aries]
Length = 346
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++++Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 66 VSSINRVLRNLASERQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 119
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 120 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 166
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 167 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 207
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++++Q + + +YDKLRM
Sbjct: 41 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASERQQMGA------DGMYDKLRM 94
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 95 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 154
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 155 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 207
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA+++
Sbjct: 22 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASER 80
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 81 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 113
>gi|5758937|gb|AAD50902.1|AF169413_1 paired-box transcription factor +- isoform, partial [Ambystoma
mexicanum]
Length = 404
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 132 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 185
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 186 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 232
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 233 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 273
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 103 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 156
Query: 184 KLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 157 KLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQMRL 216
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 217 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 273
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 91/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 88 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 146
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTPSPAHL--ALPHNPG 319
+Q ++ +YDKLRM NGQ G W WYPG++ PTP N
Sbjct: 147 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTN 200
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 201 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 260
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 261 LPEARIQVWFSNRRAKWRREEKLRNQRR 288
>gi|1488322|gb|AAB05932.1| Xpax6 [Xenopus laevis]
Length = 422
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 85/179 (47%), Gaps = 53/179 (29%)
Query: 130 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
HY P +FA R+RL + I VSSINRVLRNLA+ K+Q S E +
Sbjct: 89 HYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGS------EGM 142
Query: 182 YDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPGSVTPISRDD----- 225
YDKLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 143 YDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQM 202
Query: 226 -----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 203 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 76 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA------HLALPHNPG 319
+Q S E +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 135 QQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|5758935|gb|AAD50901.1|AF169412_1 paired-box transcription factor ++ isoform, partial [Ambystoma
mexicanum]
Length = 433
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 132 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 185
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 186 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 232
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 233 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 273
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 103 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 156
Query: 184 KLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 157 KLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQMRL 216
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 217 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 273
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 20/106 (18%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 88 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 146
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTP 307
+Q ++ +YDKLRM NGQ G W WYPG++ PTP
Sbjct: 147 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTP 186
>gi|1685047|gb|AAB36681.1| paired-type homeodomain Pax-6 protein [Xenopus laevis]
Length = 453
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 151 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 204
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 205 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 251
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 252 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 85/179 (47%), Gaps = 53/179 (29%)
Query: 130 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
HY P +FA R+RL + I VSSINRVLRNLA+ K+Q S E +
Sbjct: 120 HYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGS------EGM 173
Query: 182 YDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPGSVTPISRDD----- 225
YDKLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 174 YDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQM 233
Query: 226 -----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 234 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 107 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 165
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA------HLALPHNPG 319
+Q S E +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 166 QQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 219
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 220 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 279
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 280 LPEARIQVWFSNRRAKWRREEKLRNQRR 307
>gi|395543615|ref|XP_003773712.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
[Sarcophilus harrisii]
Length = 484
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 182 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 235
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 236 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 282
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 283 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 323
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 144 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 201
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPIS 222
+ +YDKLRM NGQ G W WYPG++ PTP N S++
Sbjct: 202 -----DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNG 256
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 257 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 316
Query: 255 QVSSINR 261
QV NR
Sbjct: 317 QVWFSNR 323
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 20/106 (18%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 138 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 196
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTP 307
+Q ++ +YDKLRM NGQ G W WYPG++ PTP
Sbjct: 197 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTP 236
>gi|5758941|gb|AAD50904.1|AF169415_1 paired-box transcription factor -- isoform, partial [Ambystoma
mexicanum]
Length = 390
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 118 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 171
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 172 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 218
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 259
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 89 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 142
Query: 184 KLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 143 KLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQMRL 202
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 203 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 259
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 91/208 (43%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 74 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 132
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTPSPAHL--ALPHNPG 319
+Q ++ +YDKLRM NGQ G W WYPG++ PTP N
Sbjct: 133 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTN 186
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 187 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 246
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 247 LPEARIQVWFSNRRAKWRREEKLRNQRR 274
>gi|2495315|sp|P55864.1|PAX6_XENLA RecName: Full=Paired box protein Pax-6
gi|1685056|gb|AAB36683.1| Pax6 [Xenopus laevis]
Length = 422
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 85/179 (47%), Gaps = 53/179 (29%)
Query: 130 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
HY P +FA R+RL + I VSSINRVLRNLA+ K+Q S E +
Sbjct: 89 HYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGS------EGM 142
Query: 182 YDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPGSVTPISRDD----- 225
YDKLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 143 YDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQM 202
Query: 226 -----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 203 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 76 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA------HLALPHNPG 319
+Q S E +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 135 QQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|126723718|ref|NP_001075686.1| paired box protein Pax-6 [Oryctolagus cuniculus]
gi|77547037|gb|ABA90485.1| paired box protein PAX6 isoform b [Oryctolagus cuniculus]
Length = 436
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQPQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 105 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 158
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALP------HNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ P N S++ D
Sbjct: 159 KLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQPQEGGGENTNSISSNGEDSDEAQMRL 218
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 275
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|5758939|gb|AAD50903.1|AF169414_1 paired-box transcription factor -+ isoform, partial [Ambystoma
mexicanum]
Length = 419
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 118 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 171
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 172 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 218
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 219 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 259
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 92/187 (49%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 80 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 137
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPIS 222
+ +YDKLRM NGQ G W WYPG++ PTP N S++
Sbjct: 138 -----DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNG 192
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 193 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 252
Query: 255 QVSSINR 261
QV NR
Sbjct: 253 QVWFSNR 259
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 20/106 (18%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 74 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 132
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTP 307
+Q ++ +YDKLRM NGQ G W WYPG++ PTP
Sbjct: 133 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTP 172
>gi|2696971|dbj|BAA24024.1| PAX6 LL [Cynops pyrrhogaster]
Length = 452
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 151 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPT 204
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 205 PDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 251
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 252 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 86/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 122 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 175
Query: 184 KLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 176 KLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQMRL 235
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 236 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 292
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 20/106 (18%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 107 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 165
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST----PTP 307
+Q ++ +YDKLRM NGQ G W WYPG++ PTP
Sbjct: 166 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTP 205
>gi|18859209|ref|NP_571379.1| paired box protein Pax-6 [Danio rerio]
gi|62547|emb|CAA44867.1| pax-6 [Danio rerio]
Length = 451
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 153 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 206
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 207 QDGCQQSDGG-----------GENTNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQE 253
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 254 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 294
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 84/173 (48%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +Y+KLRM
Sbjct: 128 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYEKLRM 181
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P + G S++ D
Sbjct: 182 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGGENTNSISSNGEDSDETQMRLQLKR 241
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 242 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 294
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 109 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 167
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +Y+KLRM NGQ G W WYPG++
Sbjct: 168 QQMG------ADGMYEKLRMLNGQTGTWGTRPGWYPGTS 200
>gi|77547035|gb|ABA90484.1| paired box protein PAX6 isoform a [Oryctolagus cuniculus]
Length = 422
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 106/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQPQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 90/187 (48%), Gaps = 50/187 (26%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALP------HNPGSVTPIS 222
+ +YDKLRM NGQ G W WYPG++ P N S++
Sbjct: 140 -----DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQPQEGGGENTNSISSNG 194
Query: 223 RDD----------------------------AKEFERTHYPDVFARERLADKIGLPEARI 254
D KEFERTHYPDVFARERLA KI LPEARI
Sbjct: 195 EDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 254
Query: 255 QVSSINR 261
QV NR
Sbjct: 255 QVWFSNR 261
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 167
>gi|129651|sp|P26630.1|PAX6_DANRE RecName: Full=Paired box protein Pax-6; AltName: Full=Pax[Zf-a]
gi|62549|emb|CAA43661.1| Pax[zf-a] [Danio rerio]
gi|44890538|gb|AAH66722.1| Pax6a protein [Danio rerio]
Length = 437
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQSDGG-----------GENTNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 84/173 (48%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +Y+KLRM
Sbjct: 114 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYEKLRM 167
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P + G S++ D
Sbjct: 168 LNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGGENTNSISSNGEDSDETQMRLQLKR 227
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 228 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +Y+KLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYEKLRMLNGQTGTWGTRPGWYPGTS 186
>gi|228153|prf||1717390A pax gene
Length = 374
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 107/161 (66%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 76 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 129
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 130 QDGCQQSDGG-----------GENTNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQE 176
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 177 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 217
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 85/177 (48%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +Y+
Sbjct: 47 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYE 100
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD------- 225
KLRM NGQ G W WYPG++ P + G S++ D
Sbjct: 101 KLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGGGENTNSISSNGEDSDETQMRL 160
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 161 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 217
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 32 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 90
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +Y+KLRM NGQ G W WYPG++
Sbjct: 91 QQMG------ADGMYEKLRMLNGQTGTWGTRPGWYPGTS 123
>gi|1669589|dbj|BAA13681.1| Xenopus Pax-6 short [Xenopus laevis]
Length = 370
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQ+NRTSFT E
Sbjct: 174 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQKNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA+ K+Q S E +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMGS------EGMYD 144
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPGSVTPISRDD------- 225
KLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 145 KLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 76 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLA------LPHNPG 319
+Q S E +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 135 QQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|18859211|ref|NP_571716.1| paired box gene 6b [Danio rerio]
gi|3779238|gb|AAC96095.1| Pax-family transcription factor 6.2 [Danio rerio]
Length = 437
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 108/161 (67%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+D+ E+ T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 193 QDGCQQ---------QDNGGEN--TNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 114 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 167
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPH------NPGSVTPISRDD----------- 225
NGQ G W WYPG++ P N S++ D
Sbjct: 168 LNGQSGTWGTRPGWYPGTSVPGQPNQDGCQQQDNGGENTNSISSNGEDSDETQMRLQLKR 227
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 228 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 280
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYDKLRMLNGQSGTWGTRPGWYPGTS 186
>gi|18138024|emb|CAC80514.1| paired box protein [Mus musculus]
Length = 292
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 103/155 (66%), Gaps = 24/155 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
QI++LEKEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 269
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 80/167 (47%), Gaps = 49/167 (29%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 109 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 162
Query: 188 FNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 163 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 222
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQ 255
KEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 223 KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 269
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAHLALPHNPGS 320
+Q ++ +YDKLRM NGQ G W WYPG++ P G
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGG 197
>gi|1669587|dbj|BAA13680.1| Xenopus Pax-6 long [Xenopus laevis]
Length = 421
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 105/161 (65%), Gaps = 24/161 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA+ K+Q S E +YDKLRM NGQ W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASDKQQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQ+NRTSFT E
Sbjct: 174 QEGCQPQEGV-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQKNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA+ K+Q SE +YD
Sbjct: 91 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDKQQMG------SEGMYD 144
Query: 184 KLRMFNGQPG-W----AWYPGSTPTPSPA------HLALPHNPGSVTPISRDD------- 225
KLRM NGQ W WYPG++ PA + N S++ D
Sbjct: 145 KLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTNSISSNGEDSDEAQMRL 204
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 QLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 89/208 (42%), Gaps = 69/208 (33%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + ++R P +FA R+RL + I VSSINRVLRNLA+ K
Sbjct: 76 PRVATPEVVNKIAHYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASDK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPA------HLALPHNPG 319
+Q S E +YDKLRM NGQ W WYPG++ PA + N
Sbjct: 135 QQMGS------EGMYDKLRMLNGQTATWGSRPGWYPGTSVPGQPAQEGCQPQEGVGENTN 188
Query: 320 SV------------------------TPISRDDAKGLVQQSAR----------------- 338
S+ T +++ + L ++ R
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 339 ------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRR 276
>gi|49902846|gb|AAH76068.1| Pax6b protein [Danio rerio]
Length = 384
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 102/159 (64%), Gaps = 30/159 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPN 192
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDS---QMRLRLKRKLQRNRTSF 114
D + + N+ SS EDS QMRL+LKRKLQRNRTSF
Sbjct: 193 Q----------------DGCQQQDNGGENTNSISSNGEDSDETQMRLQLKRKLQRNRTSF 236
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
T EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 237 TQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 275
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 82/172 (47%), Gaps = 49/172 (28%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YD
Sbjct: 110 KRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYD 163
Query: 184 KLRMFNGQPG-WA----WYPGSTPTPSPAHLALPH------NPGSVTPISRDD------- 225
KLRM NGQ G W WYPG++ P N S++ D
Sbjct: 164 KLRMLNGQSGTWGTRPGWYPGTSVPGQPNQDGCQQQDNGGENTNSISSNGEDSDETQMRL 223
Query: 226 ---------------------AKEFERTHYPDVFARERLADKIGLPEARIQV 256
KEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 224 QLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 275
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 154 QQMG------ADGMYDKLRMLNGQSGTWGTRPGWYPGTS 186
>gi|345492062|ref|XP_001601318.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
Length = 593
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 115/204 (56%), Gaps = 51/204 (25%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQT-----------------------SETVYDKLRMFN 39
VSSINRVLRNLAAQKEQ+ Q +E+VYDKLR+ N
Sbjct: 120 VSSINRVLRNLAAQKEQRQQQQQQQPGGGGVGGGGGGPVGVGVGAGSPAESVYDKLRLLN 179
Query: 40 GQP-GWA----WYPGSTPPP--------SPAHL-ALPHNPGSVTPISRDDAKEHESTSDI 85
GQ GW WYP P SP+H ALP +P + + E + SD
Sbjct: 180 GQTTGWPRPNPWYPSGAGSPFSSLQPSLSPSHCTALPPDPADILHAKKVAELEGGAHSD- 238
Query: 86 NSEPNSSAD-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
E NS D +D Q RLRLKRKLQRNRTSF+NEQID+LEKEFERTHYPDV
Sbjct: 239 --ETNSGGDNSNAGSVSGGADDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDV 296
Query: 135 FARERLADKIGLPEARIQVSSINR 158
FARERLA KIGLPEARIQV NR
Sbjct: 297 FARERLAGKIGLPEARIQVWFSNR 320
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 98/232 (42%), Gaps = 96/232 (41%)
Query: 126 FERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT---- 177
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 89 LYKSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQPGGG 148
Query: 178 -------------------SETVYDKLRMFNGQP-GWA----WYPGSTPTP--------S 205
+E+VYDKLR+ NGQ GW WYP +P S
Sbjct: 149 GVGGGGGGPVGVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFSSLQPSLS 208
Query: 206 PAHL-ALPHNP------------------------------GSVTPISRDD--------- 225
P+H ALP +P GSV+ + DD
Sbjct: 209 PSHCTALPPDPADILHAKKVAELEGGAHSDETNSGGDNSNAGSVSGGADDDQARLRLKRK 268
Query: 226 ----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 269 LQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 320
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 51/111 (45%), Gaps = 32/111 (28%)
Query: 229 FERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT---- 280
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 89 LYKSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQPGGG 148
Query: 281 -------------------SETVYDKLRMFNGQ-PGW----AWYPGSTPTP 307
+E+VYDKLR+ NGQ GW WYP +P
Sbjct: 149 GVGGGGGGPVGVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSP 199
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 21/22 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLR QRR
Sbjct: 314 QVWFSNRRAKWRREEKLRTQRR 335
>gi|55742272|ref|NP_001006763.1| paired box 6 [Xenopus (Silurana) tropicalis]
gi|49522632|gb|AAH75551.1| paired box 6 [Xenopus (Silurana) tropicalis]
Length = 424
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 108/161 (67%), Gaps = 22/161 (13%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P PA
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 173
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
++ E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 174 QDGCQ---------PQEGGGGGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 222
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 223 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 263
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 91/189 (48%), Gaps = 52/189 (27%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASA 173
++ S +++R P +FA R+RL + I VSSINRVLRNLA++K+Q +
Sbjct: 82 EVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA- 139
Query: 174 HNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLAL--------PHNPGSVTP 220
+ +YDKLRM NGQ G W WYPG++ PA N S++
Sbjct: 140 -----DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCQPQEGGGGGENTNSISS 194
Query: 221 ISRDD----------------------------AKEFERTHYPDVFARERLADKIGLPEA 252
D KEFERTHYPDVFARERLA KI LPEA
Sbjct: 195 NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEA 254
Query: 253 RIQVSSINR 261
RIQV NR
Sbjct: 255 RIQVWFSNR 263
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 16/106 (15%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAH 311
+Q ++ +YDKLRM NGQ G W WYPG++ PA
Sbjct: 135 QQMG------ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQ 174
>gi|15080680|dbj|BAB62531.1| paired box transcription factor Pax6 [Lethenteron camtschaticum]
Length = 448
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 108/168 (64%), Gaps = 34/168 (20%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ------PGWA----WYPGSTP 52
VSSINRVLRNLA++K+ + E VYDKLRM NGQ GW WYPG+
Sbjct: 149 VSSINRVLRNLASEKQPMGA------EGVYDKLRMLNGQQQQQPGAGWGARPGWYPGA-- 200
Query: 53 PPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSAD--EDSQMRLRLKRKLQRN 110
ALP G + H+ + D S NS++D ED+QMRL+LKRKLQRN
Sbjct: 201 -------ALPGQQGP------EGCASHDGSLD-TSLSNSASDDSEDAQMRLQLKRKLQRN 246
Query: 111 RTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 247 RTSFTQEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNR 294
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 135/324 (41%), Gaps = 84/324 (25%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA++K+ + E VYD
Sbjct: 120 KRECPSIFAWEIRDRLLSEGACTSDNIPSVSSINRVLRNLASEKQPMGA------EGVYD 173
Query: 184 KLRMFNGQ------PGWA----WYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTH 233
KLRM NGQ GW WYPG+ ALP G S D +
Sbjct: 174 KLRMLNGQQQQQPGAGWGARPGWYPGA---------ALPGQQGPEGCASHDGSL------ 218
Query: 234 YPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNG 293
D +D + R+Q+ ++ RN + ++Q A + E +
Sbjct: 219 --DTSLSNSASDDSEDAQMRLQLK--RKLQRNRTSFTQEQIEALEKEFERTH-------- 266
Query: 294 QPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREE 353
YP V R +K + ++ QVWFSNRRAKWRREE
Sbjct: 267 ------YP------------------DVFARERLASKIDLPEARIQVWFSNRRAKWRREE 302
Query: 354 KLRNQRRGSTGSVNS--ANTTTSTTALDHVP-PTSQSPPPSSRLPLNPGGFNPS------ 404
KLRNQRR ++ + + N++ S T +P PT+ P + L G S
Sbjct: 303 KLRNQRRQASNAPSHIPINSSFSATVYQPIPQPTAPGMHPGAMLGRTDVGLGNSYSALPP 362
Query: 405 ----SMYSSIPQPAGMDSYNPSCL 424
SM +++P A M S SC+
Sbjct: 363 MPSFSMANNLPMQAPMGSQGYSCM 386
>gi|321464774|gb|EFX75780.1| eyeless [Daphnia pulex]
Length = 619
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 110/203 (54%), Gaps = 47/203 (23%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS-------ETVYDKLRMFNGQPGW------AWYP- 48
VSSINRVLRNLAAQKE Q + ++VYDKLRM NGQ W WYP
Sbjct: 132 VSSINRVLRNLAAQKEHQQQHQHPHQHATIPSPDSVYDKLRMLNGQSQWPRTNTNTWYPN 191
Query: 49 ------------GSTPPP--------SPAHLALPH----NPGSVTPISRDDAKEHESTSD 84
G+ PP SP L H N GS D E
Sbjct: 192 GNGAGLGLTTGVGAGSPPYTPLPGATSPDQTPLCHQISSNDGSYNHKKGGDDVMSEDGGV 251
Query: 85 INSEPNSSA---------DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
+ E + SA +D Q RLRLKRKLQRNRTSFTNEQI+SLEKEFERTHYPDVF
Sbjct: 252 SSGENSRSAPPTPTTTTPSDDDQARLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVF 311
Query: 136 ARERLADKIGLPEARIQVSSINR 158
ARERLA KIGLPEARIQV NR
Sbjct: 312 ARERLAAKIGLPEARIQVWFSNR 334
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 300 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 334
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 23/123 (18%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
TN+ + + +F+R P +FA R+RL + I VSSINRVLRNLAAQKE Q
Sbjct: 92 TNDVVGKIS-QFKR-ECPSIFAWEIRDRLLQEAICNNDNIPSVSSINRVLRNLAAQKEHQ 149
Query: 171 ASAHNQTS-------ETVYDKLRMFNGQPGW------AWYPGSTPTPSPAHLALPHNPGS 217
+ ++VYDKLRM NGQ W WYP + A L L G+
Sbjct: 150 QQHQHPHQHATIPSPDSVYDKLRMLNGQSQWPRTNTNTWYPNG----NGAGLGLTTGVGA 205
Query: 218 VTP 220
+P
Sbjct: 206 GSP 208
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 228 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS-- 281
+F+R P +FA R+RL + I VSSINRVLRNLAAQKE Q +
Sbjct: 101 QFKR-ECPSIFAWEIRDRLLQEAICNNDNIPSVSSINRVLRNLAAQKEHQQQHQHPHQHA 159
Query: 282 -----ETVYDKLRMFNGQPGW------AWYPGSTPTPSPAHLALPHNPGSVTP 323
++VYDKLRM NGQ W WYP + A L L G+ +P
Sbjct: 160 TIPSPDSVYDKLRMLNGQSQWPRTNTNTWYPNG----NGAGLGLTTGVGAGSP 208
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWFSNRRAKWRREEKLRNQRRG
Sbjct: 328 QVWFSNRRAKWRREEKLRNQRRG 350
>gi|348523547|ref|XP_003449285.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
Length = 715
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 113/184 (61%), Gaps = 28/184 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPPPSPAH 58
VSSINRVLRNLA+ K+Q + +E ++DKL+M N Q W WYPG+ +
Sbjct: 417 VSSINRVLRNLASDKQQMGTVG---AEGMFDKLKMLNAQSSWGGRSGWYPGTALSATGET 473
Query: 59 LA--LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
L P G E+T +++ N E++QMRL+LKRKLQRNRTSFT
Sbjct: 474 LTQKCPQAEGG------------ENTVSVST--NGEDSEETQMRLQLKRKLQRNRTSFTQ 519
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----NLAAQKEQQA 171
+QI++LEKEFERTHYPDVFARERLA+KI LPEARIQV NR + L Q+ Q +
Sbjct: 520 DQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQVS 579
Query: 172 SAHN 175
S+ N
Sbjct: 580 SSSN 583
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 51/199 (25%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL A+ + + VSSINRVLRNLA+ K+Q + +E ++D
Sbjct: 388 KRECPSIFAWEIRDRLLAEGVCTNDNIPSVSSINRVLRNLASDKQQMGTVG---AEGMFD 444
Query: 184 KLRMFNGQPGWA----WYPGSTPTPSPAHLA--LPHNPGSVTPISR----DDA------- 226
KL+M N Q W WYPG+ + + L P G +S +D+
Sbjct: 445 KLKMLNAQSSWGGRSGWYPGTALSATGETLTQKCPQAEGGENTVSVSTNGEDSEETQMRL 504
Query: 227 ----------------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
KEFERTHYPDVFARERLA+KI LPEARIQV NR +
Sbjct: 505 QLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAK 564
Query: 265 -----NLAAQKEQQASAHN 278
L Q+ Q +S+ N
Sbjct: 565 WRREEKLRNQRRQVSSSSN 583
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 107/261 (40%), Gaps = 93/261 (35%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL A+ + + VSSINRVLRNLA+ K
Sbjct: 373 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLAEGVCTNDNIPSVSSINRVLRNLASDK 431
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPTPSPAHLA--LPHNPGSVTPI 324
+Q + +E ++DKL+M N Q W WYPG+ + + L P G +
Sbjct: 432 QQMGTVG---AEGMFDKLKMLNAQSSWGGRSGWYPGTALSATGETLTQKCPQAEGGENTV 488
Query: 325 S-----------------------------RDDAKGLVQQSAR----------------- 338
S +D + L ++ R
Sbjct: 489 SVSTNGEDSEETQMRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKID 548
Query: 339 ------QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
QVWFSNRRAKWRREEKLRNQRR + S N H+P +S
Sbjct: 549 LPEARIQVWFSNRRAKWRREEKLRNQRRQVSSSSN------------HIPISS------- 589
Query: 393 RLPLNPGGFNPSSMYSSIPQP 413
FN +S+Y +PQP
Sbjct: 590 -------SFN-TSVYQPLPQP 602
>gi|47206453|emb|CAF89478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 433
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 104/160 (65%), Gaps = 20/160 (12%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPPPSPAH 58
VSSINRVLRNLA+ K+ + +E ++DKL+M G GW WY G+
Sbjct: 117 VSSINRVLRNLASDKQPLGA---MATEGMFDKLKMLGGPTGWGGRSGWYAGA-------- 165
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
AL S P + + E TS +++ P E++QMRL+LKRKLQRNRTSFT +Q
Sbjct: 166 -ALTGLTSSTVP---SECPQAEDTS-VSASPPGEDSEETQMRLQLKRKLQRNRTSFTQDQ 220
Query: 119 IDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
ID+LEKEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 221 IDALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 260
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 85/176 (48%), Gaps = 45/176 (25%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL A+ + + VSSINRVLRNLA+ K+ + +E ++D
Sbjct: 88 KKECPSIFAWEIRDRLLAEGVCTNDNIPSVSSINRVLRNLASDKQPLGA---MATEGMFD 144
Query: 184 KLRMFNGQPGWA----WYPG-------STPTPSPAHLA---------------------- 210
KL+M G GW WY G S+ PS A
Sbjct: 145 KLKMLGGPTGWGGRSGWYAGAALTGLTSSTVPSECPQAEDTSVSASPPGEDSEETQMRLQ 204
Query: 211 ----LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
L N S T D KEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 205 LKRKLQRNRTSFTQDQIDALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 260
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 82/191 (42%), Gaps = 64/191 (33%)
Query: 231 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ P +FA R+RL A+ + + VSSINRVLRNLA+ K+ + +E ++D
Sbjct: 88 KKECPSIFAWEIRDRLLAEGVCTNDNIPSVSSINRVLRNLASDKQPLGA---MATEGMFD 144
Query: 287 KLRMFNG------QPGW---AWYPGSTPTPSPAHLALPHN-------PG----------- 319
KL+M G + GW A G T + P+ + PG
Sbjct: 145 KLKMLGGPTGWGGRSGWYAGAALTGLTSSTVPSECPQAEDTSVSASPPGEDSEETQMRLQ 204
Query: 320 -------SVTPISRDDAKGLVQQSAR-----------------------QVWFSNRRAKW 349
+ T ++D L ++ R QVWFSNRRAKW
Sbjct: 205 LKRKLQRNRTSFTQDQIDALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKW 264
Query: 350 RREEKLRNQRR 360
RREEKLRNQRR
Sbjct: 265 RREEKLRNQRR 275
>gi|340728299|ref|XP_003402463.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
Length = 826
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 115/196 (58%), Gaps = 43/196 (21%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQT---------------SETVYDKLRMFNGQP-GWA- 45
VSSINRVLRNLAAQKEQ+ Q +E+VYDKLR+ NGQ GW
Sbjct: 401 VSSINRVLRNLAAQKEQRQQQQQQQQGVAAVGVGVGAGSPAESVYDKLRLLNGQTTGWPR 460
Query: 46 ---WYPGSTPPP--------SPAHL-ALPHNPGSVTPISRDDAKEHESTSDINSEPNSSA 93
WYP P SP+H ALP +P + + E + SD E NS
Sbjct: 461 PNPWYPSGAGSPFPSLQPSLSPSHCTALPPDPADILHAKKVAELEGGAHSD---ETNSGG 517
Query: 94 D-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
D +D Q RLRLKRKLQRNRTSF+NEQID+LEKEFERTHYPDVFARERLA
Sbjct: 518 DNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAG 577
Query: 143 KIGLPEARIQVSSINR 158
KIGLPEARIQV NR
Sbjct: 578 KIGLPEARIQVWFSNR 593
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 98/222 (44%), Gaps = 88/222 (39%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT------ 177
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 372 KSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVAAV 431
Query: 178 ---------SETVYDKLRMFNGQP-GWA----WYPGSTPTP--------SPAHL-ALPHN 214
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP +
Sbjct: 432 GVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALPPD 491
Query: 215 P------------------------------GSVTPISRDD------------------- 225
P GSV+ + DD
Sbjct: 492 PADILHAKKVAELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSN 551
Query: 226 ------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 552 EQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 593
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 21/22 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLR QRR
Sbjct: 587 QVWFSNRRAKWRREEKLRTQRR 608
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 33/124 (26%)
Query: 231 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT------ 280
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 372 KSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVAAV 431
Query: 281 ---------SETVYDKLRMFNGQ-PGW----AWYPGSTPTP--------SPAHL-ALPHN 317
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP +
Sbjct: 432 GVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALPPD 491
Query: 318 PGSV 321
P +
Sbjct: 492 PADI 495
>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
Length = 384
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 111/188 (59%), Gaps = 33/188 (17%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPAH 58
VSSINRVLRNLAA+K H ++DKLRM NGQ WA WY + P
Sbjct: 106 VSSINRVLRNLAAEKTM---GHGD----MFDKLRMLNGQ--WARSGPWYAPNVNPAMSGQ 156
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
L+ H ++ P ++ E ++ D DED+Q RLRLKRKLQRNRTSFT +Q
Sbjct: 157 LSGHH---TMEPFKKEGEHEPKAAED---------DEDAQARLRLKRKLQRNRTSFTAQQ 204
Query: 119 IDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--------VLRNLAAQKEQQ 170
I+ LEKEFERTHYPDVFARERLA KI LPEARIQV NR LRN Q+ +
Sbjct: 205 IEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQQAEV 264
Query: 171 ASAHNQTS 178
H Q+S
Sbjct: 265 GGVHTQSS 272
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 93/201 (46%), Gaps = 60/201 (29%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL A+KI E VSSINRVLRNLAA+K H ++DKLRM
Sbjct: 81 PSIFAWEIRDRLLAEKICNQENIPSVSSINRVLRNLAAEKTM---GHGD----MFDKLRM 133
Query: 188 FNGQPGWA----WY-----PGSTPTPSPAHLALPHNP-GSVTPISRDD------------ 225
NGQ WA WY P + S H P G P + +D
Sbjct: 134 LNGQ--WARSGPWYAPNVNPAMSGQLSGHHTMEPFKKEGEHEPKAAEDDEDAQARLRLKR 191
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR------- 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 192 KLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRRE 251
Query: 262 -VLRNLAAQKEQQASAHNQTS 281
LRN Q+ + H Q+S
Sbjct: 252 EKLRNQRRQQAEVGGVHTQSS 272
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR V +T + SS LPL+
Sbjct: 238 QVWFSNRRAKWRREEKLRNQRR-QQAEVGGVHTQS-----------------SSHLPLSS 279
Query: 399 G-GFNPSSMYSSIPQPAG-----------------MDSYNPSCLQQAAREHHHHSSYSYM 440
G N S+Y IPQP+ M S++ + + SSY+ M
Sbjct: 280 GYSTNNVSVYQPIPQPSAATMVPRTAPDSYSAIPPMPSFSMASGPNIGMQPRDTSSYTRM 339
Query: 441 FHDSLHSLQSAYQRAAPAAHSSPHPH---PAHPG 471
H H S Y +AP H + H P H G
Sbjct: 340 LHQPTHGYDSLY--SAPPNHHAMTSHGHVPTHHG 371
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 43/74 (58%), Gaps = 17/74 (22%)
Query: 235 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL A+KI E VSSINRVLRNLAA+K H ++DKLRM
Sbjct: 81 PSIFAWEIRDRLLAEKICNQENIPSVSSINRVLRNLAAEKTM---GHGD----MFDKLRM 133
Query: 291 FNGQPGWA----WY 300
NGQ WA WY
Sbjct: 134 LNGQ--WARSGPWY 145
>gi|350403203|ref|XP_003486730.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
Length = 796
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 115/196 (58%), Gaps = 43/196 (21%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQT---------------SETVYDKLRMFNGQP-GWA- 45
VSSINRVLRNLAAQKEQ+ Q +E+VYDKLR+ NGQ GW
Sbjct: 365 VSSINRVLRNLAAQKEQRQQQQQQQQGVAAVGVGVGAGSPAESVYDKLRLLNGQTTGWPR 424
Query: 46 ---WYPGSTPPP--------SPAHL-ALPHNPGSVTPISRDDAKEHESTSDINSEPNSSA 93
WYP P SP+H ALP +P + + E + SD E NS
Sbjct: 425 PNPWYPSGAGSPFPSLQPSLSPSHCTALPPDPADILHAKKVAELEGGAHSD---ETNSGG 481
Query: 94 D-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
D +D Q RLRLKRKLQRNRTSF+NEQID+LEKEFERTHYPDVFARERLA
Sbjct: 482 DNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAG 541
Query: 143 KIGLPEARIQVSSINR 158
KIGLPEARIQV NR
Sbjct: 542 KIGLPEARIQVWFSNR 557
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 98/222 (44%), Gaps = 88/222 (39%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT------ 177
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 336 KSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVAAV 395
Query: 178 ---------SETVYDKLRMFNGQP-GWA----WYPGSTPTP--------SPAHL-ALPHN 214
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP +
Sbjct: 396 GVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALPPD 455
Query: 215 P------------------------------GSVTPISRDD------------------- 225
P GSV+ + DD
Sbjct: 456 PADILHAKKVAELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSN 515
Query: 226 ------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 516 EQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 557
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 21/22 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLR QRR
Sbjct: 551 QVWFSNRRAKWRREEKLRTQRR 572
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 33/124 (26%)
Query: 231 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT------ 280
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 336 KSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVAAV 395
Query: 281 ---------SETVYDKLRMFNGQ-PGW----AWYPGSTPTP--------SPAHL-ALPHN 317
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP +
Sbjct: 396 GVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALPPD 455
Query: 318 PGSV 321
P +
Sbjct: 456 PADI 459
>gi|328779009|ref|XP_001120031.2| PREDICTED: hypothetical protein LOC724238 [Apis mellifera]
Length = 897
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 115/196 (58%), Gaps = 43/196 (21%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQT---------------SETVYDKLRMFNGQP-GWA- 45
VSSINRVLRNLAAQKEQ+ Q +E+VYDKLR+ NGQ GW
Sbjct: 465 VSSINRVLRNLAAQKEQRQQQQQQQQGVAAVGVGVGAGSPAESVYDKLRLLNGQTTGWPR 524
Query: 46 ---WYPGSTPPP--------SPAHL-ALPHNPGSVTPISRDDAKEHESTSDINSEPNSSA 93
WYP P SP+H ALP +P + + E + SD E NS
Sbjct: 525 PNPWYPSGAGSPFPSLQPSLSPSHCTALPPDPADILHAKKVAELEGGAHSD---ETNSGG 581
Query: 94 D-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
D +D Q RLRLKRKLQRNRTSF+NEQID+LEKEFERTHYPDVFARERLA
Sbjct: 582 DNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAG 641
Query: 143 KIGLPEARIQVSSINR 158
KIGLPEARIQV NR
Sbjct: 642 KIGLPEARIQVWFSNR 657
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 98/222 (44%), Gaps = 88/222 (39%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT------ 177
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 436 KSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVAAV 495
Query: 178 ---------SETVYDKLRMFNGQP-GWA----WYPGSTPTP--------SPAHL-ALPHN 214
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP +
Sbjct: 496 GVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALPPD 555
Query: 215 P------------------------------GSVTPISRDD------------------- 225
P GSV+ + DD
Sbjct: 556 PADILHAKKVAELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSN 615
Query: 226 ------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 616 EQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 657
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 21/22 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLR QRR
Sbjct: 651 QVWFSNRRAKWRREEKLRTQRR 672
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 33/124 (26%)
Query: 231 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT------ 280
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 436 KSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVAAV 495
Query: 281 ---------SETVYDKLRMFNGQ-PGW----AWYPGSTPTP--------SPAHL-ALPHN 317
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP +
Sbjct: 496 GVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALPPD 555
Query: 318 PGSV 321
P +
Sbjct: 556 PADI 559
>gi|17227115|gb|AAL38015.1| PAX6 [Mus musculus]
Length = 352
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 102/157 (64%), Gaps = 24/157 (15%)
Query: 7 NRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLAL 61
+R+LRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 104 DRLLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGC 157
Query: 62 PHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++
Sbjct: 158 QQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEA 204
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 205 LEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 241
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 69/144 (47%), Gaps = 45/144 (31%)
Query: 157 NRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLAL 211
+R+LRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 104 DRLLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGC 157
Query: 212 PHNPG------SVTPISRDD----------------------------AKEFERTHYPDV 237
G S++ D KEFERTHYPDV
Sbjct: 158 QQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDV 217
Query: 238 FARERLADKIGLPEARIQVSSINR 261
FARERLA KI LPEARIQV NR
Sbjct: 218 FARERLAAKIDLPEARIQVWFSNR 241
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 67/159 (42%), Gaps = 64/159 (40%)
Query: 260 NRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLAL 314
+R+LRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 104 DRLLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGC 157
Query: 315 PHNPG------------------------------SVTPISRDDAKGLVQQSAR------ 338
G + T +++ + L ++ R
Sbjct: 158 QQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDV 217
Query: 339 -----------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 218 FARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 256
>gi|78370180|gb|ABB43131.1| Pax-6 [Daphnia pulex]
Length = 469
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 109/203 (53%), Gaps = 47/203 (23%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS-------ETVYDKLRMFNGQPGW------AWYP- 48
VSSINRVLRNLAAQKE Q + ++VYDKLRM NGQ W WYP
Sbjct: 120 VSSINRVLRNLAAQKEHQQQHQHPHQHATIPSPDSVYDKLRMLNGQSQWPRTNTNTWYPN 179
Query: 49 ------------GSTPPP--------SPAHLALPH----NPGSVTPISRDDAKEHESTSD 84
G+ PP SP L H N GS D E
Sbjct: 180 GNGAGLGLTTGVGAGSPPYTPLPGATSPDQTPLCHQISSNDGSYNHKKGGDDVMSEDGGV 239
Query: 85 INSEPNSSA---------DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
+ E + SA +D Q RLRLKRKLQRNRTSFTNEQI+SLEKEFERTHYPDVF
Sbjct: 240 SSGENSRSAPPTPTTTTPSDDDQARLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVF 299
Query: 136 ARERLADKIGLPEARIQVSSINR 158
ARERLA KIG PEARIQV NR
Sbjct: 300 ARERLAAKIGSPEARIQVWFSNR 322
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIG PEARIQV NR
Sbjct: 288 KEFERTHYPDVFARERLAAKIGSPEARIQVWFSNR 322
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 23/123 (18%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
TN+ + + +F+R P +FA R+RL + I VSSINRVLRNLAAQKE Q
Sbjct: 80 TNDVVGKIS-QFKR-ECPSIFAWEIRDRLLQEAICNNDNIPSVSSINRVLRNLAAQKEHQ 137
Query: 171 ASAHNQTS-------ETVYDKLRMFNGQPGW------AWYPGSTPTPSPAHLALPHNPGS 217
+ ++VYDKLRM NGQ W WYP + A L L G+
Sbjct: 138 QQHQHPHQHATIPSPDSVYDKLRMLNGQSQWPRTNTNTWYPNG----NGAGLGLTTGVGA 193
Query: 218 VTP 220
+P
Sbjct: 194 GSP 196
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 228 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS-- 281
+F+R P +FA R+RL + I VSSINRVLRNLAAQKE Q +
Sbjct: 89 QFKR-ECPSIFAWEIRDRLLQEAICNNDNIPSVSSINRVLRNLAAQKEHQQQHQHPHQHA 147
Query: 282 -----ETVYDKLRMFNGQPGW------AWYPGSTPTPSPAHLALPHNPGSVTP 323
++VYDKLRM NGQ W WYP + A L L G+ +P
Sbjct: 148 TIPSPDSVYDKLRMLNGQSQWPRTNTNTWYPNG----NGAGLGLTTGVGAGSP 196
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWFSNRRAKWRREEKLRNQRRG
Sbjct: 316 QVWFSNRRAKWRREEKLRNQRRG 338
>gi|383862169|ref|XP_003706556.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
Length = 552
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 115/196 (58%), Gaps = 43/196 (21%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQT---------------SETVYDKLRMFNGQP-GWA- 45
VSSINRVLRNLAAQKEQ+ Q +E+VYDKLR+ NGQ GW
Sbjct: 129 VSSINRVLRNLAAQKEQRQQQQQQQQGVAAVGVGVGAGSPAESVYDKLRLLNGQTTGWPR 188
Query: 46 ---WYPGSTPPP--------SPAHL-ALPHNPGSVTPISRDDAKEHESTSDINSEPNSSA 93
WYP P SP+H ALP +P + + E + SD E NS
Sbjct: 189 PNPWYPSGAGSPFPSLQPSLSPSHCTALPPDPADILHAKKVAELEGGAHSD---ETNSGG 245
Query: 94 D-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
D +D Q RLRLKRKLQRNRTSF+NEQID+LEKEFERTHYPDVFARERLA
Sbjct: 246 DNSNAGSVSGGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAG 305
Query: 143 KIGLPEARIQVSSINR 158
KIGLPEARIQV NR
Sbjct: 306 KIGLPEARIQVWFSNR 321
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 103/235 (43%), Gaps = 90/235 (38%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E ++ + ++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+
Sbjct: 89 TAEVVNKIS--LYKSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQR 146
Query: 171 ASAHNQT---------------SETVYDKLRMFNGQP-GWA----WYPGSTPTP------ 204
Q +E+VYDKLR+ NGQ GW WYP +P
Sbjct: 147 QQQQQQQQGVAAVGVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQP 206
Query: 205 --SPAHL-ALPHNP------------------------------GSVTPISRDD------ 225
SP+H ALP +P GSV+ + DD
Sbjct: 207 SLSPSHCTALPPDPADILHAKKVAELEGGAHSDETNSGGDNSNAGSVSGGTDDDQARLRL 266
Query: 226 -------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 267 KRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 321
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 61/126 (48%), Gaps = 33/126 (26%)
Query: 229 FERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT---- 280
++ P +FA R+RL + I VSSINRVLRNLAAQKEQ+ Q
Sbjct: 98 LYKSECPSIFAWEIRDRLLQEGVCTNDNIPSVSSINRVLRNLAAQKEQRQQQQQQQQGVA 157
Query: 281 -----------SETVYDKLRMFNGQ-PGW----AWYPGSTPTP--------SPAHL-ALP 315
+E+VYDKLR+ NGQ GW WYP +P SP+H ALP
Sbjct: 158 AVGVGVGAGSPAESVYDKLRLLNGQTTGWPRPNPWYPSGAGSPFPSLQPSLSPSHCTALP 217
Query: 316 HNPGSV 321
+P +
Sbjct: 218 PDPADI 223
>gi|347963096|ref|XP_311087.5| AGAP000067-PA [Anopheles gambiae str. PEST]
gi|333467362|gb|EAA06761.5| AGAP000067-PA [Anopheles gambiae str. PEST]
Length = 313
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 108/167 (64%), Gaps = 35/167 (20%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPG---------STP 52
VSSINRVLRNLA+ KE + Q++ETVY+K+++FN G W W S P
Sbjct: 136 VSSINRVLRNLASNKETSS----QSNETVYEKIKLFNNTSGHWTWCQNIGSGQFNFSSHP 191
Query: 53 PPSPAHLAL------PHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRK 106
P HL+L P P + E SD + +S DEDS++RL+LKRK
Sbjct: 192 IP---HLSLKTSTEQPTKPANCCL---------EEMSD---KYSSEDDEDSELRLKLKRK 236
Query: 107 LQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
LQRNRTSFTNEQI++LE+EFERTHYPDVFARERL+++I LPEARIQV
Sbjct: 237 LQRNRTSFTNEQIENLEREFERTHYPDVFARERLSERIQLPEARIQV 283
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 85/181 (46%), Gaps = 56/181 (30%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA+ KE + Q++ETVY+
Sbjct: 107 KAECPSIFAWEIRDRLLSEGTCNNDNIPSVSSINRVLRNLASNKETSS----QSNETVYE 162
Query: 184 KLRMFNGQPG-WAW--------------------YPGSTPTPS-PAHLALPHNPGSVTPI 221
K+++FN G W W ST P+ PA+ L +
Sbjct: 163 KIKLFNNTSGHWTWCQNIGSGQFNFSSHPIPHLSLKTSTEQPTKPANCCLEEMSDKYSSE 222
Query: 222 SRDDA--------------------------KEFERTHYPDVFARERLADKIGLPEARIQ 255
+D+ +EFERTHYPDVFARERL+++I LPEARIQ
Sbjct: 223 DDEDSELRLKLKRKLQRNRTSFTNEQIENLEREFERTHYPDVFARERLSERIQLPEARIQ 282
Query: 256 V 256
V
Sbjct: 283 V 283
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 231 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ P +FA R+RL + I VSSINRVLRNLA+ KE + Q++ETVY+
Sbjct: 107 KAECPSIFAWEIRDRLLSEGTCNNDNIPSVSSINRVLRNLASNKETSS----QSNETVYE 162
Query: 287 KLRMFNGQPG-WAW 299
K+++FN G W W
Sbjct: 163 KIKLFNNTSGHWTW 176
>gi|395742931|ref|XP_003777840.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pongo
abelii]
Length = 421
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 99/152 (65%), Gaps = 24/152 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 187
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 188 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
QI++LEKEFERTHYPDVFA ERLA KI LPEA
Sbjct: 235 QIEALEKEFERTHYPDVFALERLAAKIDLPEA 266
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 76/164 (46%), Gaps = 49/164 (29%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q ++ +YDKLRM
Sbjct: 109 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMG------ADGMYDKLRM 162
Query: 188 FNGQPG-W----AWYPGSTPTPSPAHLALPHNPG------SVTPISRDD----------- 225
NGQ G W WYPG++ P G S++ D
Sbjct: 163 LNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKR 222
Query: 226 -----------------AKEFERTHYPDVFARERLADKIGLPEA 252
KEFERTHYPDVFA ERLA KI LPEA
Sbjct: 223 KLQRNRTSFTQEQIEALEKEFERTHYPDVFALERLAAKIDLPEA 266
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 149 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 181
>gi|293631905|gb|ADE59459.1| paired box protein 6 [Metacrinus rotundus]
Length = 436
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/229 (45%), Positives = 129/229 (56%), Gaps = 41/229 (17%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ----PGWAWYPGSTPPPSPAH 58
VSSINRVLRNLAA+K + ++DKLRM NGQ P WY TP H
Sbjct: 126 VSSINRVLRNLAAEKNHMGH------DPMFDKLRMINGQWPRPPANPWY---TP-----H 171
Query: 59 LALP-----HNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTS 113
+P NP +V P + ++ E SD ++Q RLRLKRKLQRNRTS
Sbjct: 172 QGMPGQMGQMNPEAVFPKKEGEGRKGEDESD-----------ETQARLRLKRKLQRNRTS 220
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK-EQQAS 172
FT +QI+ LEKEFERTHYPDVFARERLA KI LPEARIQV NR + +K Q
Sbjct: 221 FTPQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 280
Query: 173 AHNQTSETVYDKLRMFNGQPGWAWYPGS---TPTPSPAHLALPHNPGSV 218
+ TS++ ++L++ PG+A + P P P H +LP P SV
Sbjct: 281 QGDGTSQSPVNQLQL---TPGYASNMNTHVYQPIPQPNHTSLPMAPRSV 326
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 112/235 (47%), Gaps = 54/235 (22%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++ + I VSSINRVLRNLAA+K + ++DKLRM
Sbjct: 101 PSIFAWEIRDRLLNENVCSQDTIPSVSSINRVLRNLAAEKNHMGH------DPMFDKLRM 154
Query: 188 FNGQ----PGWAWY------PGSTPTPSPAHL--------------------------AL 211
NGQ P WY PG +P + L
Sbjct: 155 INGQWPRPPANPWYTPHQGMPGQMGQMNPEAVFPKKEGEGRKGEDESDETQARLRLKRKL 214
Query: 212 PHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 270
N S TP ++ KEFERTHYPDVFARERLA KI LPEARIQV NR + +K
Sbjct: 215 QRNRTSFTPQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEK 274
Query: 271 -EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS---TPTPSPAHLALPHNPGSV 321
Q + TS++ ++L++ PG+A + P P P H +LP P SV
Sbjct: 275 LRNQRRQGDGTSQSPVNQLQL---TPGYASNMNTHVYQPIPQPNHTSLPMAPRSV 326
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 124/299 (41%), Gaps = 106/299 (35%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL ++ + I VSSINRVLRNLAA+K + ++DKLRM
Sbjct: 101 PSIFAWEIRDRLLNENVCSQDTIPSVSSINRVLRNLAAEKNHMGH------DPMFDKLRM 154
Query: 291 FNGQ----PGWAWY------PGSTPTPSPAHL--------------------------AL 314
NGQ P WY PG +P + L
Sbjct: 155 INGQWPRPPANPWYTPHQGMPGQMGQMNPEAVFPKKEGEGRKGEDESDETQARLRLKRKL 214
Query: 315 PHNPGSVTPISRDDAKGLVQQS-------------------AR-QVWFSNRRAKWRREEK 354
N S TP ++ + +++ AR QVWFSNRRAKWRREEK
Sbjct: 215 QRNRTSFTPQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEK 274
Query: 355 LRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPG---GFNPSSMYSSIP 411
LRNQRR G TSQS P ++L L PG N + +Y IP
Sbjct: 275 LRNQRRQGDG-------------------TSQS--PVNQLQLTPGYASNMN-THVYQPIP 312
Query: 412 QPAGMDSYNPSCLQQAAREHHHHSSYSYM--FHDSLHSLQ-------SAYQRAAPAAHS 461
QP N + L A R +SS M F + H+LQ ++Y R P AH+
Sbjct: 313 QP------NHTSLPMAPRSVDSYSSLPTMPTFSMAPHNLQMQARDNVTSYARMLPPAHT 365
>gi|170040740|ref|XP_001848147.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864330|gb|EDS27713.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 318
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 113/163 (69%), Gaps = 16/163 (9%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAW--------YPGSTPP 53
VSSINRVLRNLA+ KE + Q++ETVY+K+++FN G W W + S+ P
Sbjct: 136 VSSINRVLRNLASNKETSS----QSNETVYEKIKLFNNTSGHWTWCQNIGGGQFNFSSHP 191
Query: 54 PSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTS 113
S L P +P + +++ D++ + +S DEDS++RL+LKRKLQRNRTS
Sbjct: 192 ISHLSLKSPTDPSQQQ--QQQASQQQSKPDDMSDKYSSEDDEDSELRLKLKRKLQRNRTS 249
Query: 114 FTNEQIDSLEK-EFERTHYPDVFARERLADKIGLPEARIQVSS 155
FTNEQI++LE+ EFERTHYPDVFARERL+++I LPEARIQV++
Sbjct: 250 FTNEQIENLERAEFERTHYPDVFARERLSERIQLPEARIQVTT 292
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 84/190 (44%), Gaps = 63/190 (33%)
Query: 128 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL + I VSSINRVLRNLA+ KE + Q++ETVY+
Sbjct: 107 KAECPSIFAWEIRDRLLSEGVCNNDNIPSVSSINRVLRNLASNKETSS----QSNETVYE 162
Query: 184 KLRMFNGQPG-WAW---YPGSTPTPSP---AHLAL--PHNPGSVTPI------------- 221
K+++FN G W W G S +HL+L P +P
Sbjct: 163 KIKLFNNTSGHWTWCQNIGGGQFNFSSHPISHLSLKSPTDPSQQQQQQASQQQSKPDDMS 222
Query: 222 ----SRDD------------------------AKEFERTHY-----PDVFARERLADKIG 248
S DD + ER + PDVFARERL+++I
Sbjct: 223 DKYSSEDDEDSELRLKLKRKLQRNRTSFTNEQIENLERAEFERTHYPDVFARERLSERIQ 282
Query: 249 LPEARIQVSS 258
LPEARIQV++
Sbjct: 283 LPEARIQVTT 292
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 9/74 (12%)
Query: 231 RTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ P +FA R+RL + I VSSINRVLRNLA+ KE + Q++ETVY+
Sbjct: 107 KAECPSIFAWEIRDRLLSEGVCNNDNIPSVSSINRVLRNLASNKETSS----QSNETVYE 162
Query: 287 KLRMFNGQPG-WAW 299
K+++FN G W W
Sbjct: 163 KIKLFNNTSGHWTW 176
>gi|432860293|ref|XP_004069487.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
Length = 433
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 104/160 (65%), Gaps = 25/160 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPPPSPAH 58
VSSINRVLRNLA+ K+Q S +E ++DKL+M N W +WY G+T
Sbjct: 139 VSSINRVLRNLASDKQQMGSLG---TEGMFDKLKMLNVHTSWGGRSSWYAGTT------- 188
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
L+ P A+ E+ +NS S E++QMRL+LKRKLQRNRTSFT +Q
Sbjct: 189 LSSTECP---------QAEGRENGISVNSSTEDS--EETQMRLQLKRKLQRNRTSFTQDQ 237
Query: 119 IDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
I++LEKEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 238 IEALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 277
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 86/171 (50%), Gaps = 40/171 (23%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL A+ + + VSSINRVLRNLA+ K+Q S +E ++D
Sbjct: 110 KRECPSIFAWEIRDRLLAEGVCSNDNIPSVSSINRVLRNLASDKQQMGSLG---TEGMFD 166
Query: 184 KLRMFNGQPGW----AWYPGSTPTPSPAHLALPHNPGSVTPISRDDA------------- 226
KL+M N W +WY G+T + + A G S +D+
Sbjct: 167 KLKMLNVHTSWGGRSSWYAGTTLSSTECPQAEGRENGISVNSSTEDSEETQMRLQLKRKL 226
Query: 227 ----------------KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 227 QRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 277
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 90/202 (44%), Gaps = 60/202 (29%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL A+ + + VSSINRVLRNLA+ K
Sbjct: 95 PRVATPEVVAKIAQYKR-ECPSIFAWEIRDRLLAEGVCSNDNIPSVSSINRVLRNLASDK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPTPSPAHLALPHNPG-SV---- 321
+Q S +E ++DKL+M N W +WY G+T + + A G SV
Sbjct: 154 QQMGSLG---TEGMFDKLKMLNVHTSWGGRSSWYAGTTLSSTECPQAEGRENGISVNSST 210
Query: 322 --------------------TPISRDDAKGLVQQSAR----------------------- 338
T ++D + L ++ R
Sbjct: 211 EDSEETQMRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKIDLPEARI 270
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 271 QVWFSNRRAKWRREEKLRNQRR 292
>gi|984800|gb|AAA75363.1| Pax-6 [Paracentrotus lividus]
Length = 442
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 112/188 (59%), Gaps = 34/188 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPAH 58
VSSINRVLRNLA++K H ++DKLRM NGQ WA WY P + A
Sbjct: 134 VSSINRVLRNLASEKTM---GHGD----MFDKLRMLNGQ--WARSGPWY---APNVNAAM 181
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
P ++ P ++ EHES ++ DED+Q RLRLKRKLQRNRTSFT +Q
Sbjct: 182 PGQPLGHHTMEPFKKEG--EHESKAE--------DDEDAQARLRLKRKLQRNRTSFTAQQ 231
Query: 119 IDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--------VLRNLAAQKEQQ 170
I+ LEKEFERTHYPDVFARERLA KI LPEARIQV NR LRN Q+ +
Sbjct: 232 IEELEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQQAEV 291
Query: 171 ASAHNQTS 178
H Q+S
Sbjct: 292 GGVHTQSS 299
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 144/368 (39%), Gaps = 106/368 (28%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL A+KI E VSSINRVLRNLA++K H ++DKLRM
Sbjct: 109 PSIFAWEIRDRLLAEKICNQENIPSVSSINRVLRNLASEKTM---GHGD----MFDKLRM 161
Query: 188 FNGQPGWA----WYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERL 243
NGQ WA WY P + A P ++ P ++ E + D AR RL
Sbjct: 162 LNGQ--WARSGPWY---APNVNAAMPGQPLGHHTMEPFKKEGEHESKAEDDEDAQARLRL 216
Query: 244 ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS 303
K+ RN + QQ + E + YP
Sbjct: 217 KRKL---------------QRNRTSFTAQQIEELEKEFERTH--------------YP-- 245
Query: 304 TPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGST 363
V R K + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 246 ----------------DVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRR-QQ 288
Query: 364 GSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPG-GFNPSSMYSSIPQPAG------- 415
V +T + SS LPL+ G N S+Y IPQP+
Sbjct: 289 AEVGGVHTQS-----------------SSHLPLSSGYSSNNVSVYQPIPQPSAATMVPRT 331
Query: 416 ----------MDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHS-SPH 464
M S++ + + SSY+ M H H S Y P H+ S H
Sbjct: 332 APDSYSAIPPMPSFSMASGPNIGMQPRDTSSYTRMLHQPTHGYDSLYS-TPPNHHTMSSH 390
Query: 465 PH-PAHPG 471
H PAH G
Sbjct: 391 GHAPAHHG 398
>gi|357609290|gb|EHJ66384.1| eyeless [Danaus plexippus]
Length = 334
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 111/183 (60%), Gaps = 28/183 (15%)
Query: 2 KVSSINRVLRNLAAQKEQQASAH--NQTSETVYDKLRMFNGQPG---------WAWYPGS 50
KVSSINRVLRNLAAQKE+ ++ N S VY++LR+ G PG W +
Sbjct: 10 KVSSINRVLRNLAAQKEKSSNQQPSNDCSTPVYERLRLL-GTPGSAPTWPRSPWPTQIDT 68
Query: 51 TPPP------SPAHLALPHNPGSVTPISRDDAK---------EHESTSDINSEPNSSADE 95
PP SP A+ N G+ P+ + + E+ S NS SS +
Sbjct: 69 RTPPYQLHSLSPGPQAIGCN-GTELPVMKKGEEPLEGLEALHSDETGSGDNSNAGSSGAD 127
Query: 96 DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
+ RLRLKRKLQRNRTSFTNEQID+LE+EFERTHYPDVFARERLA KIGLPEARIQV
Sbjct: 128 EDAARLRLKRKLQRNRTSFTNEQIDNLEREFERTHYPDVFARERLAAKIGLPEARIQVWF 187
Query: 156 INR 158
NR
Sbjct: 188 SNR 190
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 152 QVSSINRVLRNLAAQKEQQASAH--NQTSETVYDKLRMFNGQPGWA--W----YPGSTPT 203
+VSSINRVLRNLAAQKE+ ++ N S VY++LR+ G PG A W +P T
Sbjct: 10 KVSSINRVLRNLAAQKEKSSNQQPSNDCSTPVYERLRLL-GTPGSAPTWPRSPWPTQIDT 68
Query: 204 PSPAHLALPHNPG-SVTPISRDDAKEFERTHYPDVFARERLADKIGLPE-ARIQVSSINR 261
+P + +PG + + ++ P +D+ G + + S +
Sbjct: 69 RTPPYQLHSLSPGPQAIGCNGTELPVMKKGEEPLEGLEALHSDETGSGDNSNAGSSGADE 128
Query: 262 VLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 321
L +++ Q + + T+E + + R F YP V
Sbjct: 129 DAARLRLKRKLQRNRTSFTNEQIDNLEREFE----RTHYP------------------DV 166
Query: 322 TPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
R AK + ++ QVWFSNRRAKWRREEK+R+QRR
Sbjct: 167 FARERLAAKIGLPEARIQVWFSNRRAKWRREEKIRSQRR 205
>gi|325516451|gb|ADZ24784.1| Pax6 [Terebratalia transversa]
Length = 433
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 114/185 (61%), Gaps = 19/185 (10%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPG--STPPPSP 56
VSSINRVLRNL + Q H +YDKL + NGQP W WYPG PP S
Sbjct: 126 VSSINRVLRNLTT--DNQKGMH---PGAMYDKLGLLNGQP-WPRHNPWYPGPGGMPPLSG 179
Query: 57 AH-LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFT 115
++ L +P TP + + KE + SD N E + + D QMR+RLKRKLQRNRTSFT
Sbjct: 180 SNQYNLTPSP---TPAAMETKKE-TAGSDSNPETPQNGESDEQMRMRLKRKLQRNRTSFT 235
Query: 116 NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLAAQKEQQASA 173
N QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R + Q+ A
Sbjct: 236 NSQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRREA 295
Query: 174 HNQTS 178
N TS
Sbjct: 296 ANGTS 300
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 94/207 (45%), Gaps = 64/207 (30%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + + I VSSINRVLRNL + Q H +YDKL +
Sbjct: 101 PSIFAWEIRDRLLQETVCSQENIPSVSSINRVLRNLTT--DNQKGMH---PGAMYDKLGL 155
Query: 188 FNGQPGWA----WYPG--------------STPTPSPAHL-------------------- 209
NGQP W WYPG TP+P+PA +
Sbjct: 156 LNGQP-WPRHNPWYPGPGGMPPLSGSNQYNLTPSPTPAAMETKKETAGSDSNPETPQNGE 214
Query: 210 -----------ALPHNPGSVTPISRDDA--KEFERTHYPDVFARERLADKIGLPEARIQV 256
L N S T S+ +A KEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 215 SDEQMRMRLKRKLQRNRTSFTN-SQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQV 273
Query: 257 SSINR--VLRNLAAQKEQQASAHNQTS 281
NR R + Q+ A N TS
Sbjct: 274 WFSNRRAKWRREEKLRNQRREAANGTS 300
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 28/100 (28%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL + + I VSSINRVLRNL + Q H +YDKL +
Sbjct: 101 PSIFAWEIRDRLLQETVCSQENIPSVSSINRVLRNLTT--DNQKGMH---PGAMYDKLGL 155
Query: 291 FNGQPGW----AWYPG--------------STPTPSPAHL 312
NGQP W WYPG TP+P+PA +
Sbjct: 156 LNGQP-WPRHNPWYPGPGGMPPLSGSNQYNLTPSPTPAAM 194
>gi|4426551|dbj|BAA20936.1| mdkPax-6 [Oryzias sp.]
Length = 213
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 99/153 (64%), Gaps = 24/153 (15%)
Query: 11 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNP 65
RNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 1 RNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQD 54
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G+ E+T+ I+S N E++QMRL+LKRKLQRNRTSFT EQI++LEKE
Sbjct: 55 GA-----------GENTNSISS--NGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKE 101
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 102 FERTHYPDVFARERLAAKIDLPEARIQVWFSNR 134
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 65/140 (46%), Gaps = 45/140 (32%)
Query: 161 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNP 215
RNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 1 RNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQD 54
Query: 216 G------SVTPISRDDA----------------------------KEFERTHYPDVFARE 241
G S++ D KEFERTHYPDVFARE
Sbjct: 55 GAGENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARE 114
Query: 242 RLADKIGLPEARIQVSSINR 261
RLA KI LPEARIQV NR
Sbjct: 115 RLAAKIDLPEARIQVWFSNR 134
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 63/155 (40%), Gaps = 64/155 (41%)
Query: 264 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNP 318
RNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 1 RNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQQD 54
Query: 319 GS------------------------------VTPISRDDAKGLVQQSAR---------- 338
G+ T +++ + L ++ R
Sbjct: 55 GAGENTNSISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARE 114
Query: 339 -------------QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 115 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 149
>gi|391333106|ref|XP_003740963.1| PREDICTED: paired box protein Pax-6-like [Metaseiulus occidentalis]
Length = 551
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 139/285 (48%), Gaps = 86/285 (30%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSE--TVYDKLRMFNGQPGWA--WYPGS-------- 50
VSSINRVLRN+AAQKEQQ+S+ + VYDKLRM NG W WYPG+
Sbjct: 148 VSSINRVLRNIAAQKEQQSSSSPHSIGSANVYDKLRMLNGS-SWTNPWYPGAAFGGLTAP 206
Query: 51 ----------------------TPPPSPAHLALP----------------HNPGSVTPIS 72
+P P+ H LP H GS
Sbjct: 207 PSAGYSPAHSHGHGHGQGGHSLSPTPAQTHSPLPQLGAQPPVVPHALQAAHLNGSTKKGF 266
Query: 73 RDDAKEHESTS-------------DINS----EPNSSADEDSQM--RLRLKRKLQRNRTS 113
RD+ + +TS DI++ E SS D D + RLRLKRKLQRNRTS
Sbjct: 267 RDEPRATLATSTPSRLCANTHVDSDIDAVSANEEQSSLDGDDETAARLRLKRKLQRNRTS 326
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----NLAAQKE 168
FT EQID+LEKEFERTHYPDVFARE+LA +I LPEARIQV NR + L Q+
Sbjct: 327 FTMEQIDALEKEFERTHYPDVFAREKLAARIDLPEARIQVWFSNRRAKWRREEKLRNQRN 386
Query: 169 QQASAHNQTSETVYDK--LRMFNGQPGWAWYPGSTPTPSPAHLAL 211
+ A + ET D L M G PG TP+P+ AL
Sbjct: 387 CRQEASPISHETTTDSPPLNMSQGGPG---------TPNPSQTAL 422
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + E++R P +FA R+RL + + VSSINRVLRN+AAQK
Sbjct: 104 PRVATPDVVNKIAEYKR-ECPSIFAWEIRDRLLSEGVCNNDNVPSVSSINRVLRNIAAQK 162
Query: 271 EQQASAHNQTSE--TVYDKLRMFNGQPGWA--WYPGS 303
EQQ+S+ + VYDKLRM NG W WYPG+
Sbjct: 163 EQQSSSSPHSIGSANVYDKLRMLNGS-SWTNPWYPGA 198
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSE- 179
E++R P +FA R+RL + + VSSINRVLRN+AAQKEQQ+S+ +
Sbjct: 117 EYKR-ECPSIFAWEIRDRLLSEGVCNNDNVPSVSSINRVLRNIAAQKEQQSSSSPHSIGS 175
Query: 180 -TVYDKLRMFNGQPGWA--WYPGS 200
VYDKLRM NG W WYPG+
Sbjct: 176 ANVYDKLRMLNGS-SWTNPWYPGA 198
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 61/129 (47%), Gaps = 27/129 (20%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG-STGSVNSANTTTSTTALDH--------------VPP 383
QVWFSNRRAKWRREEKLRNQR S S TTT + L+ + P
Sbjct: 365 QVWFSNRRAKWRREEKLRNQRNCRQEASPISHETTTDSPPLNMSQGGPGTPNPSQTALEP 424
Query: 384 TSQSPPPSSRLP---LNPGGF----NP---SSMYSSIPQPAGMDS-YNPSCLQQAAREHH 432
S SPP +++ LNPGGF NP Y SI Q +CLQQ +
Sbjct: 425 LSASPPRVAQVASSQLNPGGFANLYNPHIAHDGYGSISQFTAYGGPMGNACLQQNSYMGS 484
Query: 433 HHSSYSYMF 441
H +Y ++
Sbjct: 485 HR-AYDTLY 492
>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
Length = 503
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 106/164 (64%), Gaps = 15/164 (9%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW---YPGSTPPPSPAHL 59
VSSINRVLRNLA++ ++ T+YDKL + NGQ AW P P S A L
Sbjct: 171 VSSINRVLRNLASENQKVLGQ----GTTMYDKLGLLNGQ---AWPRPNPWYAPNASMAGL 223
Query: 60 ALPHN---PGSVTPISRDDAKEHESTSDINSEPNSS--ADEDSQMRLRLKRKLQRNRTSF 114
+ P + P + + +S E+ STS N + + S + D QMR+RLKRKLQRNRTSF
Sbjct: 224 SAPSSYTQPNAPSAVSGKKEMENLSTSSDNGQGDGSQNGETDEQMRIRLKRKLQRNRTSF 283
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 284 TAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNR 327
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 154/388 (39%), Gaps = 123/388 (31%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL + + I VSSINRVLRNLA++ ++ T
Sbjct: 140 QFKR-ECPSIFAWEIRDRLLSEGVCTQDNIPSVSSINRVLRNLASENQKVLGQ----GTT 194
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSP-----AHLALPHNPGSVT----PISRDDAKEFER 231
+YDKL + NGQ AW P P+P A +A P S T P + KE E
Sbjct: 195 MYDKLGLLNGQ---AW-----PRPNPWYAPNASMAGLSAPSSYTQPNAPSAVSGKKEMEN 246
Query: 232 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 291
+ + G + ++++ R+ R L + +A + E +++
Sbjct: 247 LSTSSDNGQGD-GSQNGETDEQMRI----RLKRKLQRNRTSFTAAQIEALEKEFERTH-- 299
Query: 292 NGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRR 351
YP V R K + ++ QVWFSNRRAKWRR
Sbjct: 300 --------YP------------------DVFARERLAQKIDLPEARIQVWFSNRRAKWRR 333
Query: 352 EEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIP 411
EEKLRNQRR +AN +T RLP+N F P SMY +I
Sbjct: 334 EEKLRNQRR------EAANGST-------------------RLPIN-SSF-PHSMYPTIN 366
Query: 412 QP-----------------AGMDSY--------------NPSCLQQAAREHHHHSSYSYM 440
QP +G+ S NP+CLQ A SSYS M
Sbjct: 367 QPLASMAESYRDLKGWDVASGLGSMPTVPNYSLSNNITGNPACLQSNA------SSYSCM 420
Query: 441 FHDSLHSLQSAYQRAAPAAHSSPHPHPA 468
D + +Y + + +S +PA
Sbjct: 421 LPDYVSGTARSYDPLSLSNYSRSSCNPA 448
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL + + I VSSINRVLRNLA++
Sbjct: 127 PRVATPEVVQKIAQFKR-ECPSIFAWEIRDRLLSEGVCTQDNIPSVSSINRVLRNLASEN 185
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAW---YPGSTPTPSPAHLALP 315
++ T+YDKL + NGQ AW P P S A L+ P
Sbjct: 186 QKVLG----QGTTMYDKLGLLNGQ---AWPRPNPWYAPNASMAGLSAP 226
>gi|259013350|ref|NP_001158383.1| paired box 6 [Saccoglossus kowalevskii]
gi|32307795|gb|AAP79294.1| pax6 [Saccoglossus kowalevskii]
Length = 457
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 112/188 (59%), Gaps = 24/188 (12%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPAH 58
VSSINRVLR LAA+K E V+DKLR+ NGQ W WY + PPP P +
Sbjct: 127 VSSINRVLRTLAAEKNGPMGG-----EPVFDKLRLLNGQ-TWPRTGPWY-STGPPPIPHN 179
Query: 59 LAL------PHNPGSVTPI--SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRN 110
+ + P N S + S+ D E + + S D+++Q RLRLKRKLQRN
Sbjct: 180 VPISTNGTTPTNTSSTEGLVCSKKDIDAGEISDHKDGTDASGDDDEAQARLRLKRKLQRN 239
Query: 111 RTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----NLAA 165
RTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR + L
Sbjct: 240 RTSFTQYQIETLEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRN 299
Query: 166 QKEQQASA 173
Q+ Q +SA
Sbjct: 300 QRRQMSSA 307
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 95/219 (43%), Gaps = 74/219 (33%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL + + I VSSINRVLR LAA+K E
Sbjct: 96 QFKR-ECPSIFAWEIRDRLLQEQVCTQDNIPSVSSINRVLRTLAAEKNGPMGG-----EP 149
Query: 181 VYDKLRMFNGQPGWA----WYP---------------GSTPTPSPAHLAL---------- 211
V+DKLR+ NGQ W WY G+TPT + + L
Sbjct: 150 VFDKLRLLNGQ-TWPRTGPWYSTGPPPIPHNVPISTNGTTPTNTSSTEGLVCSKKDIDAG 208
Query: 212 ---PHNPGSVTPISRDDA--------------------------KEFERTHYPDVFARER 242
H G+ D+A KEFERTHYPDVFARER
Sbjct: 209 EISDHKDGTDASGDDDEAQARLRLKRKLQRNRTSFTQYQIETLEKEFERTHYPDVFARER 268
Query: 243 LADKIGLPEARIQVSSINRVLR-----NLAAQKEQQASA 276
LA KI LPEARIQV NR + L Q+ Q +SA
Sbjct: 269 LAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQMSSA 307
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 18/127 (14%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL + + I VSSINRVLR LAA+K
Sbjct: 83 PRVATPPVVGKIAQFKR-ECPSIFAWEIRDRLLQEQVCTQDNIPSVSSINRVLRTLAAEK 141
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPTPSPAHLALPHNPGSVTPISR 326
E V+DKLR+ NGQ W WY + P P P ++ + N TP +
Sbjct: 142 NGPMGG-----EPVFDKLRLLNGQ-TWPRTGPWY-STGPPPIPHNVPISTN--GTTPTNT 192
Query: 327 DDAKGLV 333
+GLV
Sbjct: 193 SSTEGLV 199
>gi|440647293|dbj|BAM74253.1| Pax-6 variant form3 [Idiosepius paradoxus]
Length = 499
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 100/164 (60%), Gaps = 15/164 (9%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW---YPGSTPPPSPAHL 59
VSSINRVLRNLA + ++ T+YDKL + NGQ AW P P S A L
Sbjct: 127 VSSINRVLRNLAGENQKVLG----QGTTMYDKLGLLNGQ---AWPRPNPWYAPNASMAGL 179
Query: 60 ALPH-----NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSF 114
+ P NP S ++ S+ + E + + D QMR+RLKRKLQRNRTSF
Sbjct: 180 SAPSSYTQPNPPSTVAGKKEMENLSASSDNGQGEGSQCGETDEQMRIRLKRKLQRNRTSF 239
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 TAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNR 283
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 142/370 (38%), Gaps = 115/370 (31%)
Query: 125 EFERTHYPDVFARERLADKIGLPEARI------QVSSINRVLRNLAAQKEQQASAHNQTS 178
+F+R P +FA E + D++ L E VSSINRVLRNLA + ++
Sbjct: 96 QFKR-ECPSIFAWE-IGDRL-LSEGVCTQDNIPSVSSINRVLRNLAGENQKVLG----QG 148
Query: 179 ETVYDKLRMFNGQPGWAW---YPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYP 235
T+YDKL + NGQ AW P P S A L+ P + P S K+
Sbjct: 149 TTMYDKLGLLNGQ---AWPRPNPWYAPNASMAGLSAPSSYTQPNPPSTVAGKKEMENLSA 205
Query: 236 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 295
+ + G + ++++ R+ R L + +A + E +++
Sbjct: 206 SSDNGQGEGSQCGETDEQMRI----RLKRKLQRNRTSFTAAQIEALEKEFERTH------ 255
Query: 296 GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKL 355
YP V R K + ++ QVWFSNRRAKWRREEKL
Sbjct: 256 ----YP------------------DVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKL 293
Query: 356 RNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQP-- 413
RNQRR +AN +T RLP+N P SMY +I QP
Sbjct: 294 RNQRR------EAANGST-------------------RLPINSS--FPHSMYPTINQPLA 326
Query: 414 ---------------AGMDSY--------------NPSCLQQAAREHHHHSSYSYMFHDS 444
+G+ S NP+CLQ A SSYS M D
Sbjct: 327 SMAESYRDLKGWDVASGLGSMPTVPNYSLSNNITGNPACLQSNA------SSYSCMLPDM 380
Query: 445 LHSLQSAYQR 454
L + R
Sbjct: 381 LEWYKEGLTR 390
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARI------QVSSINRVLRNLAA 268
P TP +F+R P +FA E + D++ L E VSSINRVLRNLA
Sbjct: 83 PRVATPEVVQKIAQFKR-ECPSIFAWE-IGDRL-LSEGVCTQDNIPSVSSINRVLRNLAG 139
Query: 269 QKEQQASAHNQTSETVYDKLRMFNGQPGWAW---YPGSTPTPSPAHLALP 315
+ ++ T+YDKL + NGQ AW P P S A L+ P
Sbjct: 140 ENQKVLG----QGTTMYDKLGLLNGQ---AWPRPNPWYAPNASMAGLSAP 182
>gi|115501621|gb|ABI98858.1| paired box 6 transcript variant 13 [Columba livia]
gi|115501625|gb|ABI98860.1| paired box 6 transcript variant 15 [Columba livia]
gi|115501629|gb|ABI98862.1| paired box 6 transcript variant 17 [Columba livia]
gi|115501633|gb|ABI98864.1| paired box 6 transcript variant 19 [Columba livia]
gi|115501637|gb|ABI98866.1| paired box 6 transcript variant 21 [Columba livia]
gi|115501641|gb|ABI98868.1| paired box 6 transcript variant 23 [Columba livia]
gi|115501645|gb|ABI98870.1| paired box 6 transcript variant 25 [Columba livia]
gi|115501649|gb|ABI98872.1| paired box 6 transcript variant 27 [Columba livia]
gi|115501653|gb|ABI98874.1| paired box 6 transcript variant 29 [Columba livia]
gi|115501657|gb|ABI98876.1| paired box 6 transcript variant 31 [Columba livia]
gi|115501661|gb|ABI98878.1| paired box 6 transcript variant 33 [Columba livia]
gi|115501665|gb|ABI98880.1| paired box 6 transcript variant 35 [Columba livia]
gi|115501669|gb|ABI98882.1| paired box 6 transcript variant 37 [Columba livia]
Length = 286
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 91/136 (66%), Gaps = 18/136 (13%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ P PA P G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINR 158
KI LPEARIQV NR
Sbjct: 110 KIDLPEARIQVWFSNR 125
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 58/123 (47%), Gaps = 39/123 (31%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD- 225
++ +YDKLRM NGQ G W WYPG++ PA P G S++ D
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSD 62
Query: 226 ---------------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSS 258
KEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 63 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWF 122
Query: 259 INR 261
NR
Sbjct: 123 SNR 125
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 56/138 (40%), Gaps = 58/138 (42%)
Query: 281 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG---------------- 319
++ +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSD 62
Query: 320 --------------SVTPISRDDAKGLVQQSAR-----------------------QVWF 342
+ T +++ + L ++ R QVWF
Sbjct: 63 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWF 122
Query: 343 SNRRAKWRREEKLRNQRR 360
SNRRAKWRREEKLRNQRR
Sbjct: 123 SNRRAKWRREEKLRNQRR 140
>gi|115501623|gb|ABI98859.1| paired box 6 transcript variant 14 [Columba livia]
gi|115501627|gb|ABI98861.1| paired box 6 transcript variant 16 [Columba livia]
gi|115501631|gb|ABI98863.1| paired box 6 transcript variant 18 [Columba livia]
gi|115501635|gb|ABI98865.1| paired box 6 transcript variant 20 [Columba livia]
gi|115501639|gb|ABI98867.1| paired box 6 transcript variant 22 [Columba livia]
gi|115501643|gb|ABI98869.1| paired box 6 transcript variant 24 [Columba livia]
gi|115501647|gb|ABI98871.1| paired box 6 transcript variant 26 [Columba livia]
gi|115501651|gb|ABI98873.1| paired box 6 transcript variant 28 [Columba livia]
gi|115501655|gb|ABI98875.1| paired box 6 transcript variant 30 [Columba livia]
gi|115501659|gb|ABI98877.1| paired box 6 transcript variant 32 [Columba livia]
gi|115501663|gb|ABI98879.1| paired box 6 transcript variant 34 [Columba livia]
gi|115501667|gb|ABI98881.1| paired box 6 transcript variant 36 [Columba livia]
gi|115501671|gb|ABI98883.1| paired box 6 transcript variant 38 [Columba livia]
Length = 280
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 91/136 (66%), Gaps = 18/136 (13%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ P PA P G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINR 158
KI LPEARIQV NR
Sbjct: 110 KIDLPEARIQVWFSNR 125
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 58/123 (47%), Gaps = 39/123 (31%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD- 225
++ +YDKLRM NGQ G W WYPG++ PA P G S++ D
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSD 62
Query: 226 ---------------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSS 258
KEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 63 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWF 122
Query: 259 INR 261
NR
Sbjct: 123 SNR 125
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 56/138 (40%), Gaps = 58/138 (42%)
Query: 281 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG---------------- 319
++ +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGGGENTNSISSNGEDSD 62
Query: 320 --------------SVTPISRDDAKGLVQQSAR-----------------------QVWF 342
+ T +++ + L ++ R QVWF
Sbjct: 63 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWF 122
Query: 343 SNRRAKWRREEKLRNQRR 360
SNRRAKWRREEKLRNQRR
Sbjct: 123 SNRRAKWRREEKLRNQRR 140
>gi|1778017|gb|AAB40616.1| Pax-6 [Doryteuthis opalescens]
Length = 460
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 104/165 (63%), Gaps = 17/165 (10%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPAH 58
VSSINRVLRNLA + ++ T+YDKL + NGQ W WY P S A
Sbjct: 128 VSSINRVLRNLAGENQKVLG----QGTTMYDKLGLLNGQ-AWPRPNPWY---APNASMAG 179
Query: 59 LALPHN---PGSVTPISRDDAKEHESTSDINSEPNSS--ADEDSQMRLRLKRKLQRNRTS 113
L+ P + P + ++ E+ ST+ N + + S + D QMR+RLKRKLQRNRTS
Sbjct: 180 LSAPSSYTQPNAPPTVAGKKEMENMSTNSDNGQGDGSQNGETDEQMRIRLKRKLQRNRTS 239
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FT QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 240 FTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNR 284
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 250 KEFERTHYPDVFARERLAQKIDLPEARIQVWFSNR 284
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 76/179 (42%), Gaps = 65/179 (36%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR +AN +T RLP+N
Sbjct: 278 QVWFSNRRAKWRREEKLRNQRR------EAANGST-------------------RLPIN- 311
Query: 399 GGFNPSSMYSSIPQP-----------------AGMDSY--------------NPSCLQQA 427
F P SMY +I QP +G+ S NP+CLQ
Sbjct: 312 SSF-PHSMYPTINQPLASMAESYRDLKGWDVASGLGSMPTVPNYSLSNNITGNPACLQSN 370
Query: 428 AREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSSPYGTSNSVNGPPT 486
A SSYS M D + +Y + + +S +PA G + T +S NG T
Sbjct: 371 A------SSYSCMLPDYVSGTARSYDPLSLSNYSRSSCNPA-AGMQSHMTPHSTNGAST 422
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL + + I VSSINRVLRNLA +
Sbjct: 84 PRVATPEVVQKIAQFKR-ECPSIFAWEIRDRLLSEGVCTQDNIPSVSSINRVLRNLAGEN 142
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPTPSPAHLALP 315
++ T+YDKL + NGQ W WY P S A L+ P
Sbjct: 143 QKVLG----QGTTMYDKLGLLNGQ-AWPRPNPWY---APNASMAGLSAP 183
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 17/96 (17%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL + + I VSSINRVLRNLA + ++ T
Sbjct: 97 QFKR-ECPSIFAWEIRDRLLSEGVCTQDNIPSVSSINRVLRNLAGENQKVLG----QGTT 151
Query: 181 VYDKLRMFNGQPGW----AWYPGSTPTPSPAHLALP 212
+YDKL + NGQ W WY P S A L+ P
Sbjct: 152 MYDKLGLLNGQ-AWPRPNPWY---APNASMAGLSAP 183
>gi|341903373|gb|EGT59308.1| hypothetical protein CAEBREN_04513 [Caenorhabditis brenneri]
Length = 473
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 120/213 (56%), Gaps = 34/213 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM----FNGQPGW--AWYPGSTPPPSP 56
VSSINRVLRNLAA+KEQ H +E +YD++R+ F P W W P
Sbjct: 133 VSSINRVLRNLAAKKEQ----HTMQTE-IYDRIRIVENNFTYNPSWYSQW-------PIQ 180
Query: 57 AHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
+ + NP T +E++ D + +P A++D+ R+RLKRKLQRNRTSFT
Sbjct: 181 MNGTVGINPFVQTTPLETKKEENDYEKDEDQKPQVEAEDDAAARMRLKRKLQRNRTSFTQ 240
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQ 176
QI+SLEKEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+
Sbjct: 241 VQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNK 295
Query: 177 TSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHL 209
S D + NG TPTP+P +
Sbjct: 296 RSSGTMDS-SLSNG----------TPTPTPGSV 317
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 111/248 (44%), Gaps = 73/248 (29%)
Query: 115 TNEQIDSLEKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
T++ ++ +E E++R P +FA E L+D I E VSSINRVLRNLAA+KEQ
Sbjct: 93 TSDVVEKIE-EYKRDQ-PSIFAWEIRDKLLSDSICNNETIPSVSSINRVLRNLAAKKEQ- 149
Query: 171 ASAHNQTSETVYDKLRM----FNGQPGW--AW------------YPGSTPTPSPAH---- 208
H +E +YD++R+ F P W W + +TP +
Sbjct: 150 ---HTMQTE-IYDRIRIVENNFTYNPSWYSQWPIQMNGTVGINPFVQTTPLETKKEENDY 205
Query: 209 -----------------------LALPHNPGSVTPISRDDA-KEFERTHYPDVFARERLA 244
L N S T + + KEFERTHYPDVFARERLA
Sbjct: 206 EKDEDQKPQVEAEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLA 265
Query: 245 DKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGST 304
KI LPEARIQV NR A+ ++ N+ S D + NG T
Sbjct: 266 QKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------T 309
Query: 305 PTPSPAHL 312
PTP+P +
Sbjct: 310 PTPTPGSV 317
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTT-----TSTTALDHVPPTSQSPPPSSR 393
QVWFSNRRAKWRREEK+RN+R T + +N T S T + P +R
Sbjct: 276 QVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMSNPIGSPASTPNR 335
Query: 394 LPLNPGGFNPSSMYSSIPQPAGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQ 453
P N P++ + +P P+ Y++ F ++ S+ + YQ
Sbjct: 336 FPSNNSANLPTTNF--VP---------PATQMYGGLSQQAMDPYTFGFANTGLSM-TPYQ 383
Query: 454 RAAPAAHSSPHPHPAHPGSSPY 475
P A PH H PG SPY
Sbjct: 384 ---PPADFQPH-HMFQPGRSPY 401
>gi|71987648|ref|NP_001024570.1| Protein VAB-3, isoform a [Caenorhabditis elegans]
gi|965066|gb|AAA82991.1| variable abnormal-3 [Caenorhabditis elegans]
gi|6434263|emb|CAA90186.2| Protein VAB-3, isoform a [Caenorhabditis elegans]
gi|1583405|prf||2120399A vab-3 gene
Length = 455
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 122/208 (58%), Gaps = 26/208 (12%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLAA+KEQ QT +YD++R+ + P +WY G P P + L
Sbjct: 121 VSSINRVLRNLAAKKEQ---VTMQTE--LYDRIRIVDNFPYNSSWY-GQWPIPMNGAVGL 174
Query: 62 PHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
NP P+ + E E D + +P + ++D+ R+RLKRKLQRNRTSFT QI+S
Sbjct: 175 --NPFVPAPLI-EPKTEGEFEKDEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIES 231
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 181
LEKEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S
Sbjct: 232 LEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGT 286
Query: 182 YDKLRMFNGQPGWAWYPGSTPTPSPAHL 209
D + NG TPTP+P +
Sbjct: 287 MDS-SLSNG----------TPTPTPGSV 303
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 111/247 (44%), Gaps = 73/247 (29%)
Query: 115 TNEQIDSLEKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
T++ ++ +E +++R P +FA E LAD I E VSSINRVLRNLAA+KEQ
Sbjct: 81 TSDVVEKIE-DYKRDQ-PSIFAWEIRDKLLADNICNNETIPSVSSINRVLRNLAAKKEQ- 137
Query: 171 ASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPTP----------SPAHLALPHNPGSVT 219
QT +YD++R+ + P +WY G P P PA L P G
Sbjct: 138 --VTMQTE--LYDRIRIVDNFPYNSSWY-GQWPIPMNGAVGLNPFVPAPLIEPKTEGEFE 192
Query: 220 PIS--------RDDA--------------------------KEFERTHYPDVFARERLAD 245
DDA KEFERTHYPDVFARERLA
Sbjct: 193 KDEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQ 252
Query: 246 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP 305
KI LPEARIQV NR A+ ++ N+ S D + NG TP
Sbjct: 253 KIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------TP 296
Query: 306 TPSPAHL 312
TP+P +
Sbjct: 297 TPTPGSV 303
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 235 PDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA E LAD I E VSSINRVLRNLAA+KEQ QT +YD++R+
Sbjct: 96 PSIFAWEIRDKLLADNICNNETIPSVSSINRVLRNLAAKKEQ---VTMQTE--LYDRIRI 150
Query: 291 FNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQ 339
+ P +WY G P P + L NP P+ +G ++ Q
Sbjct: 151 VDNFPYNSSWY-GQWPIPMNGAVGL--NPFVPAPLIEPKTEGEFEKDEDQ 197
>gi|405966276|gb|EKC31583.1| Paired box protein Pax-6 [Crassostrea gigas]
Length = 481
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 115/203 (56%), Gaps = 20/203 (9%)
Query: 2 KVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPA 57
+VSSINRVLRNLA++ ++ +YDKL + NGQ W WY + P
Sbjct: 164 QVSSINRVLRNLASENQKVMG-----QGAMYDKLGLLNGQ-NWPRTNPWYATNMGVPGLP 217
Query: 58 HLALPHNPGSVTPISRDDAKEHE-STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
A H P TP + K ++ S+S+ N + + D Q+RLRLKRKLQRNRTSFT
Sbjct: 218 PSAYTHQP---TPTLGMEKKNNDGSSSESNQSEGQNNETDEQLRLRLKRKLQRNRTSFTA 274
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQ 176
QI++LEKEFERTHYPDVFARERL+ KI LPEARIQV NR A+ ++ NQ
Sbjct: 275 AQIEALEKEFERTHYPDVFARERLSQKIDLPEARIQVWFSNR-----RAKWRREEKLRNQ 329
Query: 177 TSETVYDKLRM-FNGQPGWAWYP 198
E R+ NG YP
Sbjct: 330 RREVANGATRLPINGGFTNGMYP 352
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 88/200 (44%), Gaps = 61/200 (30%)
Query: 152 QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WY------PGST 201
QVSSINRVLRNLA++ ++ +YDKL + NGQ W WY PG
Sbjct: 164 QVSSINRVLRNLASENQKVMG-----QGAMYDKLGLLNGQ-NWPRTNPWYATNMGVPGLP 217
Query: 202 PT-----PSPA-HLALPHNPGSVTPISRDDA----------------------------- 226
P+ P+P + +N GS + ++ +
Sbjct: 218 PSAYTHQPTPTLGMEKKNNDGSSSESNQSEGQNNETDEQLRLRLKRKLQRNRTSFTAAQI 277
Query: 227 ----KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSE 282
KEFERTHYPDVFARERL+ KI LPEARIQV NR A+ ++ NQ E
Sbjct: 278 EALEKEFERTHYPDVFARERLSQKIDLPEARIQVWFSNR-----RAKWRREEKLRNQRRE 332
Query: 283 TVYDKLRM-FNGQPGWAWYP 301
R+ NG YP
Sbjct: 333 VANGATRLPINGGFTNGMYP 352
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 56/124 (45%), Gaps = 53/124 (42%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR AN T RLP+N
Sbjct: 310 QVWFSNRRAKWRREEKLRNQRR------EVANGAT-------------------RLPIN- 343
Query: 399 GGFNPSSMYSSIPQPAG------------MDSY---------NPSCLQQAAREHHHHSSY 437
GGF + MY +I Q G M SY NP+CLQ + + SSY
Sbjct: 344 GGFT-NGMYPTIHQQIGTMAADTYSSMPTMPSYTLSSNNIQANPACLQSS-----NASSY 397
Query: 438 SYMF 441
S M
Sbjct: 398 SCMI 401
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 255 QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPTPSPA 310
QVSSINRVLRNLA++ ++ +YDKL + NGQ W WY + P
Sbjct: 164 QVSSINRVLRNLASENQKVMG-----QGAMYDKLGLLNGQ-NWPRTNPWYATNMGVPGLP 217
Query: 311 HLALPHNPGSVTPISR---DDAKGLVQQSARQVWFSNRRAKWRREEKLRNQR 359
A H P + + D + QS Q ++ + + R + KL+ R
Sbjct: 218 PSAYTHQPTPTLGMEKKNNDGSSSESNQSEGQNNETDEQLRLRLKRKLQRNR 269
>gi|308494689|ref|XP_003109533.1| CRE-VAB-3 protein [Caenorhabditis remanei]
gi|308245723|gb|EFO89675.1| CRE-VAB-3 protein [Caenorhabditis remanei]
Length = 462
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 118/209 (56%), Gaps = 25/209 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW--AWYPGSTPPPSPAHLA 60
VSSINRVLRNLAA+KEQ H +YD++R+ + +WY + P + A
Sbjct: 121 VSSINRVLRNLAAKKEQ----HTIMQTEIYDRIRIVENNFPYNSSWY---SQWPLQMNGA 173
Query: 61 LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQID 120
+ N P +E+E D + +P ++D+ R+RLKRKLQRNRTSFT QI+
Sbjct: 174 VGLNAFVPAPQLETKKEENEYIKDEDQKPPVDQEDDAAARMRLKRKLQRNRTSFTQVQIE 233
Query: 121 SLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
SLEKEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S
Sbjct: 234 SLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSG 288
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHL 209
D + NG TPTP+P +
Sbjct: 289 TMDS-SLSNG----------TPTPTPGSV 306
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 108/248 (43%), Gaps = 72/248 (29%)
Query: 115 TNEQIDSLEKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
T++ ++ +E E++R P +FA E L+D I E VSSINRVLRNLAA+KEQ
Sbjct: 81 TSDVVEKIE-EYKRDQ-PSIFAWEIRDKLLSDNICNNETIPSVSSINRVLRNLAAKKEQ- 137
Query: 171 ASAHNQTSETVYDKLRM------------------FNGQPGWAWY--------------- 197
H +YD++R+ NG G +
Sbjct: 138 ---HTIMQTEIYDRIRIVENNFPYNSSWYSQWPLQMNGAVGLNAFVPAPQLETKKEENEY 194
Query: 198 --------PGSTPTPSPAHL----ALPHNPGSVTPISRDDA-KEFERTHYPDVFARERLA 244
P + A + L N S T + + KEFERTHYPDVFARERLA
Sbjct: 195 IKDEDQKPPVDQEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLA 254
Query: 245 DKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGST 304
KI LPEARIQV NR A+ ++ N+ S D + NG T
Sbjct: 255 QKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------T 298
Query: 305 PTPSPAHL 312
PTP+P +
Sbjct: 299 PTPTPGSV 306
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSA 369
QVWFSNRRAKWRREEK+RN+R S+G+++S+
Sbjct: 265 QVWFSNRRAKWRREEKMRNKR--SSGTMDSS 293
>gi|197359130|gb|ACH69781.1| paired box protein 6a [Anabarilius grahami]
Length = 284
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 97/151 (64%), Gaps = 24/151 (15%)
Query: 13 LAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNPGS 67
LA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P + G
Sbjct: 1 LASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGG 54
Query: 68 VTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFE 127
E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFE
Sbjct: 55 -----------GENTNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFE 101
Query: 128 RTHYPDVFARERLADKIGLPEARIQVSSINR 158
RTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 102 RTHYPDVFARERLAAKIDLPEARIQVWFSNR 132
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 64/138 (46%), Gaps = 45/138 (32%)
Query: 163 LAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG- 216
LA++K+Q + + +Y+KLRM NGQ G W WYPG++ P + G
Sbjct: 1 LASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQDGCQQSDGG 54
Query: 217 -----SVTPISRDD----------------------------AKEFERTHYPDVFARERL 243
S++ D KEFERTHYPDVFARERL
Sbjct: 55 GENTNSISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERL 114
Query: 244 ADKIGLPEARIQVSSINR 261
A KI LPEARIQV NR
Sbjct: 115 AAKIDLPEARIQVWFSNR 132
>gi|324508780|gb|ADY43703.1| Paired box protein Pax-6 [Ascaris suum]
Length = 470
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 105/157 (66%), Gaps = 16/157 (10%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDK-LRMFNGQPGWAWYPGSTPPPSPAHLAL 61
VSSINRVLRNLAA+KEQQA ++ YD+ LR + Q WY P P + L
Sbjct: 124 VSSINRVLRNLAAKKEQQAMQND-----FYDRALRYSSTQ----WY-NQWPMSMPGTVGL 173
Query: 62 PHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
P P+++ + + + D + +P + DED+ R+RLKRKLQRNRTSF+ EQI++
Sbjct: 174 APFP----PLAQANHIDKKDP-DEDQKPPNDPDEDAAARMRLKRKLQRNRTSFSQEQIEA 228
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
LEKEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 229 LEKEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 265
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 94/193 (48%), Gaps = 48/193 (24%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLA 164
R T ++I+S ++E P +FA E L +K+ + VSSINRVLRNLA
Sbjct: 81 RVATVNVCDKIESYKRE-----QPSIFAWEIRDKLLNEKVCSADTIPSVSSINRVLRNLA 135
Query: 165 AQKEQQASAHNQTSETV-YDKLRMFN-------GQPGWAWYPGSTPTPSPAHLAL----- 211
A+KEQQA ++ + Y + +N G G A +P P H+
Sbjct: 136 AKKEQQAMQNDFYDRALRYSSTQWYNQWPMSMPGTVGLAPFP---PLAQANHIDKKDPDE 192
Query: 212 ----PHNPG---------------SVTPISRDDA----KEFERTHYPDVFARERLADKIG 248
P++P + T S++ KEFERTHYPDVFARERLA KIG
Sbjct: 193 DQKPPNDPDEDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIG 252
Query: 249 LPEARIQVSSINR 261
LPEARIQV NR
Sbjct: 253 LPEARIQVWFSNR 265
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 218 VTPISRDDAKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
V ++ D E + P +FA E L +K+ + VSSINRVLRNLAA+KEQQ
Sbjct: 82 VATVNVCDKIESYKREQPSIFAWEIRDKLLNEKVCSADTIPSVSSINRVLRNLAAKKEQQ 141
Query: 274 ASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP 305
A ++ YD+ ++ + +P S P
Sbjct: 142 AMQND-----FYDRALRYSSTQWYNQWPMSMP 168
>gi|498022|gb|AAA40109.1| oculorhombin [Mus musculus]
Length = 284
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 89/136 (65%), Gaps = 18/136 (13%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ P P G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINR 158
KI LPEARIQV NR
Sbjct: 110 KIDLPEARIQVWFSNR 125
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 56/123 (45%), Gaps = 39/123 (31%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD- 225
++ +YDKLRM NGQ G W WYPG++ P G S++ D
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSD 62
Query: 226 ---------------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSS 258
KEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 63 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWF 122
Query: 259 INR 261
NR
Sbjct: 123 SNR 125
>gi|74224022|dbj|BAE23875.1| unnamed protein product [Mus musculus]
gi|119588641|gb|EAW68235.1| paired box gene 6 (aniridia, keratitis), isoform CRA_b [Homo
sapiens]
Length = 286
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 89/136 (65%), Gaps = 18/136 (13%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ P P G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINR 158
KI LPEARIQV NR
Sbjct: 110 KIDLPEARIQVWFSNR 125
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 56/123 (45%), Gaps = 39/123 (31%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG------SVTPISRDD- 225
++ +YDKLRM NGQ G W WYPG++ P G S++ D
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSD 62
Query: 226 ---------------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSS 258
KEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 63 EAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWF 122
Query: 259 INR 261
NR
Sbjct: 123 SNR 125
>gi|325973713|emb|CBX88047.1| Pax6 transcription factor [Eptatretus burgeri]
Length = 403
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 129/231 (55%), Gaps = 43/231 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VS INRVLRNL ++K+ A +++Y+KLR+ NG G W W+P S+P P+
Sbjct: 120 VSWINRVLRNLTSEKQALGGA-----DSMYEKLRLLNGPAGDWGNHAGWFP-SSPIPN-- 171
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G ++R ES S +++Q+RL+LKRKLQRNRTSFT E
Sbjct: 172 -----ESCGQAAKLAR------ESGGGGGGSTASDESDEAQIRLQLKRKLQRNRTSFTPE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++
Sbjct: 221 QIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNR-----RAKWRRE------- 268
Query: 178 SETVYDKLRMFNGQPGWA--WYPGSTPTPSPAHLALPHNPGSVTPISRDDA 226
+KLR QPG A P ST S + ALP P + + R+DA
Sbjct: 269 -----EKLRNQRRQPGSAPDHIPISTNFSSTVYQALPQPPPPGSMLGRNDA 314
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 118/250 (47%), Gaps = 69/250 (27%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL A+ + + VS INRVLRNL ++K+ A ++
Sbjct: 89 QFKR-ECPSIFAWEIRDRLLAEGVCANDNIPSVSWINRVLRNLTSEKQALGGA-----DS 142
Query: 181 VYDKLRMFNGQPG-WA----WYPGSTPTPS-----PAHLA-------------------- 210
+Y+KLR+ NG G W W+P S+P P+ A LA
Sbjct: 143 MYEKLRLLNGPAGDWGNHAGWFP-SSPIPNESCGQAAKLARESGGGGGGSTASDESDEAQ 201
Query: 211 --------LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
L N S TP + KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 202 IRLQLKRKLQRNRTSFTPEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNR 261
Query: 262 VLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA--WYPGSTPTPSPAHLALPHNPG 319
A+ ++ +KLR QPG A P ST S + ALP P
Sbjct: 262 -----RAKWRRE------------EKLRNQRRQPGSAPDHIPISTNFSSTVYQALPQPPP 304
Query: 320 SVTPISRDDA 329
+ + R+DA
Sbjct: 305 PGSMLGRNDA 314
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 16/103 (15%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL A+ + + VS INRVLRNL ++K
Sbjct: 76 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLAEGVCANDNIPSVSWINRVLRNLTSEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPS 308
+ A +++Y+KLR+ NG G W W+P S+P P+
Sbjct: 135 QALGGA-----DSMYEKLRLLNGPAGDWGNHAGWFP-SSPIPN 171
>gi|443711291|gb|ELU05119.1| hypothetical protein CAPTEDRAFT_228124 [Capitella teleta]
Length = 354
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/176 (47%), Positives = 101/176 (57%), Gaps = 28/176 (15%)
Query: 2 KVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPA 57
+VSSINRVLRNL + ++ +YDK + NGQ W WY + SPA
Sbjct: 21 EVSSINRVLRNLTTETQKSP-----LGGAMYDKFGLLNGQ-AWPRHNPWYAAAG---SPA 71
Query: 58 HLALPHNPGSV-----TPISRD----------DAKEHESTSDINSEPNSSADEDSQMRLR 102
+A H G TP+ D KE +S + ++D D QMR+R
Sbjct: 72 GMAGLHGMGPAPGYPQTPVGAGGGGGSSALTTDKKESTPCGSDSSATSRNSDSDEQMRMR 131
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
LKRKLQRNRTSFT +QI+ LEKEFE+THYPDVFARERLA K+ LPEARIQV NR
Sbjct: 132 LKRKLQRNRTSFTTQQIEELEKEFEKTHYPDVFARERLAQKLDLPEARIQVWFSNR 187
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 24/113 (21%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPP---PSSRLP 395
QVWFSNRRAKWRREEKLRNQRR T ++ +P S P PS P
Sbjct: 181 QVWFSNRRAKWRREEKLRNQRR------------EVETGVNRIPINSSFPNGMYPSIHQP 228
Query: 396 LN--PGGFNPSSMYSSIPQPAGMDSY--NPSCLQQAAREHHHHSSYSYMFHDS 444
+ PGG + S SS+P + ++ NP+CLQ ++ SSYS M D
Sbjct: 229 IASMPGGPDSYSGLSSMPNYSLSNNLTSNPACLQS-----NNSSSYSCMLPDC 276
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE+THYPDVFARERLA K+ LPEARIQV NR
Sbjct: 153 KEFEKTHYPDVFARERLAQKLDLPEARIQVWFSNR 187
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 14/74 (18%)
Query: 250 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTP 305
P AR +VSSINRVLRNL + ++ +YDK + NGQ W WY +
Sbjct: 17 PNAR-EVSSINRVLRNLTTETQKSP-----LGGAMYDKFGLLNGQ-AWPRHNPWYAAAG- 68
Query: 306 TPSPAHLALPHNPG 319
SPA +A H G
Sbjct: 69 --SPAGMAGLHGMG 80
>gi|168479564|dbj|BAG11538.1| paired-box protein 6 [Eptatretus burgeri]
Length = 344
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 129/231 (55%), Gaps = 43/231 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VS INRVLRNL ++K+ A +++Y+KLR+ NG G W W+P S+P P+
Sbjct: 61 VSWINRVLRNLTSEKQALGGA-----DSMYEKLRLLNGPAGDWGNHAGWFP-SSPIPN-- 112
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
+ G ++R ES S +++Q+RL+LKRKLQRNRTSFT E
Sbjct: 113 -----ESCGQAAKLAR------ESGGGGGGSTASDESDEAQIRLQLKRKLQRNRTSFTPE 161
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR + ++E
Sbjct: 162 QIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNRRAK---WRRE--------- 209
Query: 178 SETVYDKLRMFNGQPGWA--WYPGSTPTPSPAHLALPHNPGSVTPISRDDA 226
+KLR QPG A P ST S + ALP P + + R+DA
Sbjct: 210 -----EKLRNQRRQPGSAPDHIPISTNFSSTVYQALPQPPPPGSMLGRNDA 255
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 114/243 (46%), Gaps = 68/243 (27%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL A+ + + VS INRVLRNL ++K+ A +++Y+KLR+
Sbjct: 36 PAIFAWEIRDRLLAEGVCANDNIPSVSWINRVLRNLTSEKQALGGA-----DSMYEKLRL 90
Query: 188 FNGQPG-WA----WYPGSTPTPS-----PAHLA--------------------------- 210
NG G W W+P S+P P+ A LA
Sbjct: 91 LNGPAGDWGNHAGWFP-SSPIPNESCGQAAKLARESGGGGGGSTASDESDEAQIRLQLKR 149
Query: 211 -LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAA 268
L N S TP + KEFERTHYPDVFARERLA KI LPEARIQV NR +
Sbjct: 150 KLQRNRTSFTPEQIEALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNRRAK---W 206
Query: 269 QKEQQASAHNQTSETVYDKLRMFNGQPGWA--WYPGSTPTPSPAHLALPHNPGSVTPISR 326
++E +KLR QPG A P ST S + ALP P + + R
Sbjct: 207 RRE--------------EKLRNQRRQPGSAPDHIPISTNFSSTVYQALPQPPPPGSMLGR 252
Query: 327 DDA 329
+DA
Sbjct: 253 NDA 255
>gi|440647287|dbj|BAM74250.1| Pax-6 authentic variant [Idiosepius paradoxus]
Length = 459
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 100/160 (62%), Gaps = 17/160 (10%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPPPSPAH 58
VSSINRVLR+LA + ++ T+YDKL + NGQ W WY P S A
Sbjct: 127 VSSINRVLRSLAGENQKVLG----QGTTMYDKLGLLNGQ-AWPRPNPWY---APNASMAG 178
Query: 59 LALPHN---PGSVTPISRDDAKEHESTSDINS--EPNSSADEDSQMRLRLKRKLQRNRTS 113
L+ P + P + ++ + E+ S S N E + + QMR+RLKRKLQRNRTS
Sbjct: 179 LSAPSSYTQPNPPSTVAGKEEMENLSASSDNGRGEGSQCGETGEQMRIRLKRKLQRNRTS 238
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
FT QI++LEKEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 239 FTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQV 278
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 79/192 (41%), Gaps = 69/192 (35%)
Query: 125 EFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA E L++ + + VSSINRVLR+LA + ++ T
Sbjct: 96 QFKR-ECPSIFAWEVGDRLLSEGVCTQDNIPGVSSINRVLRSLAGENQKVLG----QGTT 150
Query: 181 VYDKLRMFNGQPGW----AWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE-------- 228
+YDKL + NGQ W WY P S A L+ P + P S KE
Sbjct: 151 MYDKLGLLNGQ-AWPRPNPWY---APNASMAGLSAPSSYTQPNPPSTVAGKEEMENLSAS 206
Query: 229 --------------------------------------------FERTHYPDVFARERLA 244
FERTHYPDVFARERLA
Sbjct: 207 SDNGRGEGSQCGETGEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLA 266
Query: 245 DKIGLPEARIQV 256
KI LPEARIQV
Sbjct: 267 QKIDLPEARIQV 278
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA E L++ + + VSSINRVLR+LA +
Sbjct: 83 PRVATPEVVQKIAQFKR-ECPSIFAWEVGDRLLSEGVCTQDNIPGVSSINRVLRSLAGEN 141
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGSTPTPSPAHLALP 315
++ T+YDKL + NGQ W WY P S A L+ P
Sbjct: 142 QKVLG----QGTTMYDKLGLLNGQ-AWPRPNPWY---APNASMAGLSAP 182
>gi|1296836|emb|CAA64847.1| Pax6-like protein [Lineus sanguineus]
Length = 370
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 100/164 (60%), Gaps = 14/164 (8%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA++ ++Q ++YDKL + NGQ G+ +
Sbjct: 163 VSSINRVLRNLASENQKQLG-----QSSMYDKLGLLNGQACRGLIRGTHRTLTAMTGLTA 217
Query: 63 HNPGS--------VTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSF 114
H+P ++P ++ + S PN + E+ QMR+RLKRKLQRNRTSF
Sbjct: 218 HHPQYPPQPQPPPISPTKKESDGHSSADSHSGDTPNGNESEE-QMRIRLKRKLQRNRTSF 276
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
TN QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 277 TNAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNR 320
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 286 KEFERTHYPDVFARERLAQKIDLPEARIQVWFSNR 320
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 41/75 (54%), Gaps = 27/75 (36%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR ++AN SR+P+N
Sbjct: 314 QVWFSNRRAKWRREEKLRNQRR------DAANG-------------------GSRIPINS 348
Query: 399 GGFNPSSMYSSIPQP 413
P+SMY SI QP
Sbjct: 349 S--FPNSMYPSIHQP 361
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 130 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
HY P +FA R+RL + I VSSINRVLRNLA++ ++Q ++
Sbjct: 132 HYKRECPSIFAWEIRDRLLSDAVCNQDNIPSVSSINRVLRNLASENQKQLG-----QSSM 186
Query: 182 YDKLRMFNGQPGWAWYPGS 200
YDKL + NGQ G+
Sbjct: 187 YDKLGLLNGQACRGLIRGT 205
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 233 HY----PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 284
HY P +FA R+RL + I VSSINRVLRNLA++ ++Q ++
Sbjct: 132 HYKRECPSIFAWEIRDRLLSDAVCNQDNIPSVSSINRVLRNLASENQKQLG-----QSSM 186
Query: 285 YDKLRMFNGQPGWAWYPGS 303
YDKL + NGQ G+
Sbjct: 187 YDKLGLLNGQACRGLIRGT 205
>gi|3204110|emb|CAA11364.1| Pax6 [Branchiostoma floridae]
Length = 483
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA+ ++ + + +KLR+ NG W PPS A P
Sbjct: 142 VSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPP 200
Query: 63 HNPGSVTPISRDDAKEHEST------SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
G+VT D K D N +DE +Q RLRLKRKLQRNRTSFT
Sbjct: 201 QTNGNVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDE-AQARLRLKRKLQRNRTSFTQ 259
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 260 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 301
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 58/193 (30%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I E VSSINRVLRNLA+ ++ +
Sbjct: 111 QFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGEKNTLQSLQSADPQ 169
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK------------- 227
+ +KLR+ NG W PS A P G+VT D K
Sbjct: 170 MLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGKLASQILTLHGYQD 228
Query: 228 ---------------------------------------EFERTHYPDVFARERLADKIG 248
EFERTHYPDVFARERLA KI
Sbjct: 229 QGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 288
Query: 249 LPEARIQVSSINR 261
LPEARIQV NR
Sbjct: 289 LPEARIQVWFSNR 301
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I E VSSINRVLRNLA+ +
Sbjct: 98 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGE 156
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
+ + + +KLR+ NG W PS A P G+VT D K
Sbjct: 157 KNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGK 215
>gi|3204112|emb|CAA11365.1| Pax6 [Branchiostoma floridae]
Length = 431
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA+ ++ + + +KLR+ NG W PPS A P
Sbjct: 111 VSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPP 169
Query: 63 HNPGSVTPISRDDAKEHEST------SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
G+VT D K D N +DE +Q RLRLKRKLQRNRTSFT
Sbjct: 170 QTNGNVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDE-AQARLRLKRKLQRNRTSFTQ 228
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 229 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 270
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 58/193 (30%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I E VSSINRVLRNLA+ ++ +
Sbjct: 80 QFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGEKNTLQSLQSADPQ 138
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK------------- 227
+ +KLR+ NG W PS A P G+VT D K
Sbjct: 139 MLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGKLASQILTLHGYQD 197
Query: 228 ---------------------------------------EFERTHYPDVFARERLADKIG 248
EFERTHYPDVFARERLA KI
Sbjct: 198 QGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 257
Query: 249 LPEARIQVSSINR 261
LPEARIQV NR
Sbjct: 258 LPEARIQVWFSNR 270
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I E VSSINRVLRNLA+ +
Sbjct: 67 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGE 125
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
+ + + +KLR+ NG W PS A P G+VT D K
Sbjct: 126 KNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGK 184
>gi|3204114|emb|CAA11366.1| Pax6 [Branchiostoma floridae]
Length = 439
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA+ ++ + + +KLR+ NG W PPS A P
Sbjct: 119 VSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPP 177
Query: 63 HNPGSVTPISRDDAKEHEST------SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
G+VT D K D N +DE +Q RLRLKRKLQRNRTSFT
Sbjct: 178 QTNGNVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDE-AQARLRLKRKLQRNRTSFTQ 236
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 237 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 278
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 58/193 (30%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I E VSSINRVLRNLA+ ++ +
Sbjct: 88 QFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGEKNTLQSLQSADPQ 146
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK------------- 227
+ +KLR+ NG W PS A P G+VT D K
Sbjct: 147 MLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGKLASQILTLHGYQD 205
Query: 228 ---------------------------------------EFERTHYPDVFARERLADKIG 248
EFERTHYPDVFARERLA KI
Sbjct: 206 QGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 265
Query: 249 LPEARIQVSSINR 261
LPEARIQV NR
Sbjct: 266 LPEARIQVWFSNR 278
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I E VSSINRVLRNLA+ +
Sbjct: 75 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGE 133
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
+ + + +KLR+ NG W PS A P G+VT D K
Sbjct: 134 KNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGK 192
>gi|3204118|emb|CAA11368.1| Pax6 [Branchiostoma floridae]
Length = 463
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA+ ++ + + +KLR+ NG W PPS A P
Sbjct: 119 VSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPP 177
Query: 63 HNPGSVTPISRDDAKEHEST------SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
G+VT D K D N +DE +Q RLRLKRKLQRNRTSFT
Sbjct: 178 QTNGNVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDE-AQARLRLKRKLQRNRTSFTQ 236
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 237 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 278
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 58/193 (30%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I E VSSINRVLRNLA+ ++ +
Sbjct: 88 QFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGEKNTLQSLQSADPQ 146
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK------------- 227
+ +KLR+ NG W PS A P G+VT D K
Sbjct: 147 MLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGKLASQILTLHGYQD 205
Query: 228 ---------------------------------------EFERTHYPDVFARERLADKIG 248
EFERTHYPDVFARERLA KI
Sbjct: 206 QGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 265
Query: 249 LPEARIQVSSINR 261
LPEARIQV NR
Sbjct: 266 LPEARIQVWFSNR 278
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I E VSSINRVLRNLA+ +
Sbjct: 75 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGE 133
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
+ + + +KLR+ NG W PS A P G+VT D K
Sbjct: 134 KNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGK 192
>gi|1684800|gb|AAB36534.1| paired box homeodomain protein TPAX6, partial [Mesotriton
alpestris]
Length = 233
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 86/132 (65%), Gaps = 18/132 (13%)
Query: 32 YDKLRMFNGQPG-WA----WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDIN 86
YDKLRM NGQ G W WYPG++ P P G E+T+ I+
Sbjct: 1 YDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGG-----------GENTNSIS 49
Query: 87 SEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI L
Sbjct: 50 S--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDL 107
Query: 147 PEARIQVSSINR 158
PEARIQV NR
Sbjct: 108 PEARIQVWFSNR 119
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 55/119 (46%), Gaps = 39/119 (32%)
Query: 182 YDKLRMFNGQPG-WA----WYPGST----PTPSPAHL--ALPHNPGSVTPISRDD----- 225
YDKLRM NGQ G W WYPG++ PTP N S++ D
Sbjct: 1 YDKLRMLNGQTGTWGTRPGWYPGTSVPGQPTPDGCQQQEGGGENTNSISSNGEDSDEAQM 60
Query: 226 -----------------------AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 61 RLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 119
>gi|126671099|gb|ABN09916.2| paired box 6B transcription factor [Helobdella sp. MS-2000]
Length = 432
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 103/171 (60%), Gaps = 20/171 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW-----AWYPGSTPPPSPA 57
VSSINRVLRNL + E S NQ +Y+K +F GQ W WY + P P
Sbjct: 115 VSSINRVLRNLTS--ETHKSQLNQGQ--MYEKFSLFGGQ-AWHRATNPWYSSTAAPMHPI 169
Query: 58 HLALPHNPGSVT---------PISRDDAKEHESTSDINSEPNSSADE-DSQMRLRLKRKL 107
+A H + +S+ +E TS+ + + + A+E D QMR+RLKRKL
Sbjct: 170 SMATQHQLTNSAFYNSFEKKGLLSKRKPEEDALTSNESCDSSPRANETDEQMRMRLKRKL 229
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QRNRTSFT +QI+ LEKEFE+THYPDVFARERLA K+ LPEARIQV NR
Sbjct: 230 QRNRTSFTTQQIEDLEKEFEKTHYPDVFARERLAQKLDLPEARIQVWFSNR 280
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 118/290 (40%), Gaps = 68/290 (23%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + + I VSSINRVLRNL + E S NQ +Y+K +
Sbjct: 90 PSIFAWEIRDRLLSECLCTQENIPSVSSINRVLRNLTS--ETHKSQLNQGQ--MYEKFSL 145
Query: 188 FNGQPGWAWYPGSTP----TPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFARERL 243
F GQ AW+ + P T +P H PIS + + + + F ++ L
Sbjct: 146 FGGQ---AWHRATNPWYSSTAAPMH-----------PISMATQHQLTNSAFYNSFEKKGL 191
Query: 244 ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS 303
K PE S N + +A N+T E + +L+ Q +
Sbjct: 192 LSKRK-PEEDALTS-------NESCDSSPRA---NETDEQMRMRLKR-KLQRNRTSFTTQ 239
Query: 304 TPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGST 363
H P V R K + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 240 QIEDLEKEFEKTHYP-DVFARERLAQKLDLPEARIQVWFSNRRAKWRREEKLRNQRRDVD 298
Query: 364 GSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQP 413
GS + + FNP SMYSSI QP
Sbjct: 299 GSGGRGSNS----------------------------FNP-SMYSSIHQP 319
>gi|3204116|emb|CAA11367.1| Pax6 [Branchiostoma floridae]
Length = 462
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA+ ++ + + +KLR+ NG W PPS A P
Sbjct: 142 VSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPP 200
Query: 63 HNPGSVTPISRDDAKEHEST------SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
G+VT D K D N +DE +Q RLRLKRKLQRNR+SFT
Sbjct: 201 QTNGNVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDE-AQARLRLKRKLQRNRSSFTQ 259
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 260 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 301
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 80/193 (41%), Gaps = 58/193 (30%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I E VSSINRVLRNLA+ ++ +
Sbjct: 111 QFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGEKNTLQSLQSADPQ 169
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK------------- 227
+ +KLR+ NG W PS A P G+VT D K
Sbjct: 170 MLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGKLASQILTLHGYQD 228
Query: 228 ---------------------------------------EFERTHYPDVFARERLADKIG 248
EFERTHYPDVFARERLA KI
Sbjct: 229 QGDGSNDDSDEAQARLRLKRKLQRNRSSFTQEQIEALEKEFERTHYPDVFARERLAAKID 288
Query: 249 LPEARIQVSSINR 261
LPEARIQV NR
Sbjct: 289 LPEARIQVWFSNR 301
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I E VSSINRVLRNLA+ +
Sbjct: 98 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGE 156
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
+ + + +KLR+ NG W PS A P G+VT D K
Sbjct: 157 KNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPSTAGAPPPQTNGNVTTKKEGDGK 215
>gi|440647295|dbj|BAM74254.1| Pax-6 variant form4 [Idiosepius paradoxus]
Length = 482
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 106/181 (58%), Gaps = 30/181 (16%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WY----------- 47
VSSINRVLR+LA + ++ T+YDKL + NGQ W WY
Sbjct: 127 VSSINRVLRSLAGENQKVLG----QGTTMYDKLGLLNGQ-AWPRPNPWYAPNASMAGLSA 181
Query: 48 PGS-TPPPSPAHLA------LPHNPGSVTP--ISRDDAKEHESTSDINSEPNSSADE-DS 97
P S T P P+ +A L N ++TP + R + + ++SD S E D
Sbjct: 182 PSSYTQPNPPSTVAGKKDHVLGRNGATLTPQQLWRMEMENLSASSDNGQGEGSQCGETDE 241
Query: 98 QMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSIN 157
QM +RLKRKLQRNRTSFT QI++LEKEFERTHYPDVFARERLA KI LPEARIQV N
Sbjct: 242 QMCIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQVWFSN 301
Query: 158 R 158
R
Sbjct: 302 R 302
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 164/407 (40%), Gaps = 103/407 (25%)
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQ------VSSINRVLRNLAAQKEQQASAHNQTS 178
+F+R P +FA E + D++ L E VSSINRVLR+LA + ++
Sbjct: 96 QFKR-ECPSIFAWE-IGDRL-LSEGVCTQDNIPGVSSINRVLRSLAGENQKVLG----QG 148
Query: 179 ETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVF 238
T+YDKL + NGQ AW P P+P + G P S + + + P
Sbjct: 149 TTMYDKLGLLNGQ---AW-----PRPNPWYAPNASMAGLSAPSS------YTQPNPPSTV 194
Query: 239 ARERLADKIGLPEARIQVSSINRV-LRNLAAQKEQ---QASAHNQTSETVYDKLRMFNGQ 294
A ++ +G A + + R+ + NL+A + + S +T E + +L+ Q
Sbjct: 195 AGKK-DHVLGRNGATLTPQQLWRMEMENLSASSDNGQGEGSQCGETDEQMCIRLKR-KLQ 252
Query: 295 PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRA----KWR 350
+ + H P V R K + ++ QVWFSNRRA KWR
Sbjct: 253 RNRTSFTAAQIEALEKEFERTHYP-DVFARERLAQKIDLPEARIQVWFSNRRAPAFRKWR 311
Query: 351 REEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSI 410
REEKLRNQRR +AN +T RLP+N P SMY +I
Sbjct: 312 REEKLRNQRR------EAANGST-------------------RLPINSS--FPHSMYPTI 344
Query: 411 PQP-----------------AGMDSY--------------NPSCLQQAAREHHHHSSYSY 439
QP +G+ S NP+CLQ A SSYS
Sbjct: 345 NQPLASMAESYRDLKGWDVASGLGSMPTVPNYSLSNNITGNPACLQSNA------SSYSC 398
Query: 440 MFHDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSSPYGTSNSVNGPPT 486
M D + +Y + + S +PA G + T +S NG T
Sbjct: 399 MLPDYVSGTARSYDPLSLSNCSRSSCNPA-AGVQSHMTPHSTNGAST 444
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 58/131 (44%), Gaps = 24/131 (18%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQ------VSSINRVLRNLAA 268
P TP +F+R P +FA E + D++ L E VSSINRVLR+LA
Sbjct: 83 PRVATPEVVQKIAQFKR-ECPSIFAWE-IGDRL-LSEGVCTQDNIPGVSSINRVLRSLAG 139
Query: 269 QKEQQASAHNQTSETVYDKLRMFNGQPGWAW---YPGSTPTPSPAHLALPH-----NPGS 320
+ ++ T+YDKL + NGQ AW P P S A L+ P NP S
Sbjct: 140 ENQKVLG----QGTTMYDKLGLLNGQ---AWPRPNPWYAPNASMAGLSAPSSYTQPNPPS 192
Query: 321 VTPISRDDAKG 331
+D G
Sbjct: 193 TVAGKKDHVLG 203
>gi|83318915|emb|CAJ40659.1| Pax6 protein [Platynereis dumerilii]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 101/160 (63%), Gaps = 13/160 (8%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP---PPSPAH- 58
VSSINRVLRNLA++ ++ + N +YDKL NGQ AW P + P P +P H
Sbjct: 157 VSSINRVLRNLASETQKTTLSQN----PMYDKLGFLNGQ---AW-PRTNPWYAPNAPMHG 208
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
L++ P K+ +++ + N + DE+ QMR+RLKRKLQRNRTSFTN Q
Sbjct: 209 LSMSPPYQPPNPPIPPPEKKDSASTGSSGSDNPNCDEE-QMRMRLKRKLQRNRTSFTNAQ 267
Query: 119 IDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
I++LEKEFERTHYPDVF RERLA K + E RIQV NR
Sbjct: 268 IEALEKEFERTHYPDVFTRERLAKKFDIDETRIQVWFSNR 307
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 74/178 (41%), Gaps = 60/178 (33%)
Query: 333 VQQSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
+ ++ QVWFSNRRAKWRREEKLR QRR + N H+P S
Sbjct: 295 IDETRIQVWFSNRRAKWRREEKLRQQRREAANGGN------------HIPINSSF----- 337
Query: 393 RLPLNPGGFNPSSMYSSIPQP---------AGMDSY-----------------NPSCLQQ 426
P+SMY SI QP +G S+ NP+CLQ
Sbjct: 338 ----------PNSMYPSIHQPIVSMPDSYNSGFGSFSSMPPMPTYTLSNNIAPNPACLQS 387
Query: 427 AAREHHHHSSYSYMF-HDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSSPYGTSNSVNG 483
+ + SSYS M S Y + +++S P +P PG + S+S NG
Sbjct: 388 S-----NTSSYSCMIPAMDCSSAARGYDPLSLSSYSRPACNPNTPGLQGH-MSHSANG 439
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVF RERLA K + E RIQV NR
Sbjct: 273 KEFERTHYPDVFTRERLAKKFDIDETRIQVWFSNR 307
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL + + I VSSINRVLRNLA++
Sbjct: 113 PRVATPEVVNKVAQYKR-ECPSIFAWEIRDRLLSEGVCNQDDIPSVSSINRVLRNLASET 171
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAW 299
++ + N +YDKL NGQ AW
Sbjct: 172 QKTTLSQN----PMYDKLGFLNGQ---AW 193
>gi|117650666|gb|ABK54278.1| Pax6 [Branchiostoma belcheri]
Length = 461
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA+ ++ + + +KLR+ NG W PP+ A P
Sbjct: 120 VSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN-AWPHPGPWPYPPATAGAPPP 178
Query: 63 HNPGSVTPISRDDAKEHEST------SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
G+VT D K D N +DE +Q RLRLKRKLQRNRTSFT
Sbjct: 179 QTNGNVTTKKEGDGKLASQILTLHGYQDQGDGSNDDSDE-AQARLRLKRKLQRNRTSFTQ 237
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 238 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 279
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 245 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 279
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 125 EFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL ++ I E VSSINRVLRNLA+ ++ +
Sbjct: 89 QFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGEKNTLQSLQSADPQ 147
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFAR 240
+ +KLR+ NG W P+ A P G+VT D K + +
Sbjct: 148 MLEKLRLLNGN-AWPHPGPWPYPPATAGAPPPQTNGNVTTKKEGDGKLASQILTLHGYQD 206
Query: 241 ERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWY 300
+ EA+ ++ ++ RN + ++Q A + E + Y
Sbjct: 207 QGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTH--------------Y 252
Query: 301 PGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRN 357
P V R AK + ++ QVWFSNRRAKWRREEKLRN
Sbjct: 253 P------------------DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 291
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL ++ I E VSSINRVLRNLA+ +
Sbjct: 76 PRVATPEVVAKIAQFKR-ECPSIFAWEIRDRLLSEGICTNENIPSVSSINRVLRNLASGE 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAW 299
+ + + +KLR+ NG AW
Sbjct: 135 KNTLQSLQSADPQMLEKLRLLNGN---AW 160
>gi|4519625|dbj|BAA75672.1| DjPax-6 [Dugesia japonica]
Length = 550
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 111/209 (53%), Gaps = 58/209 (27%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----------------W 46
VSSINRVLR+L+ + ++ H + +YDKL + +GQP W+
Sbjct: 134 VSSINRVLRSLSNENQR----HLVAATGMYDKLSLLSGQP-WSTAAAHAAWYSSAAAAHG 188
Query: 47 YPGSTPPPSPAHLAL-----------PHNPGSV--------------TPISRDDAK-EHE 80
Y ST P A+ L H S+ T S D K E
Sbjct: 189 YASSTFPNCGAYGGLTGIGIINGMSTAHAVASINQSNSGVNNYHVQSTTDSSDKLKSEKY 248
Query: 81 STSDINSEPNSSAD-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
S S +SE N+S++ E+ MR++LKRKLQRNRTSF+ +Q+DSLEKEFERT
Sbjct: 249 SESIAHSESNASSEPGNEYMSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERT 308
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVFARE+LADKI LPEARIQV NR
Sbjct: 309 HYPDVFAREKLADKISLPEARIQVWFSNR 337
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARE+LADKI LPEARIQV NR
Sbjct: 303 KEFERTHYPDVFAREKLADKISLPEARIQVWFSNR 337
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 4/41 (9%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR----GSTGSVNSANTTTST 375
QVWFSNRRAKWRREEKLR QR+ GS+G+ ++A T +T
Sbjct: 331 QVWFSNRRAKWRREEKLRRQRQNLMLGSSGTSSTAETNVTT 371
>gi|377685604|gb|AFB74471.1| PAX6, partial [Schmidtea polychroa]
Length = 326
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 109/209 (52%), Gaps = 58/209 (27%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----------------W 46
VSSINRVLR+L+ + ++ H + +YDKL + +GQP W+
Sbjct: 48 VSSINRVLRSLSNENQR----HLVAATGMYDKLSLLSGQP-WSTAAAHAAWYSSAAAAHG 102
Query: 47 YPGSTPPPSPAHLALP-------------------HNPG-------SVTPISRDDAKEHE 80
Y ST P A+ L N G S T S E
Sbjct: 103 YASSTFPNCGAYGGLTGIGIINGMSTAHAVASINQSNSGVTNYHVQSTTDSSDKHKSEKY 162
Query: 81 STSDINSEPNSSAD-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
S S +SE N+S++ E+ MR++LKRKLQRNRTSF+ +Q+DSLEKEFERT
Sbjct: 163 SESIAHSESNASSEPGNEYMSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERT 222
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVFARE+LADKI LPEARIQV NR
Sbjct: 223 HYPDVFAREKLADKISLPEARIQVWFSNR 251
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARE+LADKI LPEARIQV NR
Sbjct: 217 KEFERTHYPDVFAREKLADKISLPEARIQVWFSNR 251
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 4/41 (9%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR----GSTGSVNSANTTTST 375
QVWFSNRRAKWRREEKLR QR+ GS G+ ++A+T +T
Sbjct: 245 QVWFSNRRAKWRREEKLRRQRQNLMLGSNGTSSTADTNVTT 285
>gi|15741042|gb|AAK26167.1| Pax6A [Girardia tigrina]
Length = 464
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 112/209 (53%), Gaps = 58/209 (27%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----------------W 46
VSSINRVLR+L+ + ++ H + +YDKL + +GQP W+
Sbjct: 70 VSSINRVLRSLSNENQR----HLVAATGMYDKLSLLSGQP-WSTAAAHAAWYSCAAAAHG 124
Query: 47 YPGSTPPPSPAHLAL-----------PHNPGSV-----------TPISRDDAKEHEST-- 82
Y ST P A+ L H S+ + D + +H+S
Sbjct: 125 YASSTFPNCGAYGGLTGIGIINGMSTAHAVASINQSNSGVNNYHVQSTADSSGKHKSEKY 184
Query: 83 --SDINSEPNSSAD-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
S +SE N+S++ E+ MR++LKRKLQRNRTSF+ +Q+DSLEKEFERT
Sbjct: 185 SESIAHSESNASSEPGNEYLSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERT 244
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVFARE+LADKI LPEARIQV NR
Sbjct: 245 HYPDVFAREKLADKISLPEARIQVWFSNR 273
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARE+LADKI LPEARIQV NR
Sbjct: 239 KEFERTHYPDVFAREKLADKISLPEARIQVWFSNR 273
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 4/41 (9%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR----GSTGSVNSANTTTST 375
QVWFSNRRAKWRREEKLR QR+ GS+G+ ++A T +T
Sbjct: 267 QVWFSNRRAKWRREEKLRRQRQNLMLGSSGTSSTAETNVTT 307
>gi|386783703|gb|AFJ24746.1| Pax6A [Schmidtea mediterranea]
Length = 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 118/236 (50%), Gaps = 63/236 (26%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----------------W 46
VSSINRVLR+L+ + ++ H + +YDKL + +GQP W+
Sbjct: 148 VSSINRVLRSLSNENQR----HLVAATGMYDKLSLLSGQP-WSTAAAHAAWYSSAAAAHG 202
Query: 47 YPGSTPPPSPAHLALP-------------------HNPG-------SVTPISRDDAKEHE 80
Y ST P A+ L N G S T S E
Sbjct: 203 YASSTFPNCGAYGGLTGIGIINGMSTAHAVASINQSNSGVTNYHVQSTTDSSDKHKSEKY 262
Query: 81 STSDINSEPNSSAD-----------EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
S S +SE N+S++ E+ MR++LKRKLQRNRTSF+ +Q+DSLEKEFERT
Sbjct: 263 SESIAHSESNASSEPGNEYMSGVKSENDDMRIKLKRKLQRNRTSFSTDQLDSLEKEFERT 322
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINRVLR-----NLAAQKEQQASAHNQTSET 180
HYPDVFARE+LADKI LPEARIQV NR + L Q++ N TS T
Sbjct: 323 HYPDVFAREKLADKISLPEARIQVWFSNRRAKWRREEKLRRQRQNLMLGSNGTSST 378
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----NLAAQKEQQASAHNQTS 281
KEFERTHYPDVFARE+LADKI LPEARIQV NR + L Q++ N TS
Sbjct: 317 KEFERTHYPDVFAREKLADKISLPEARIQVWFSNRRAKWRREEKLRRQRQNLMLGSNGTS 376
Query: 282 ET 283
T
Sbjct: 377 ST 378
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR----GSTGSVNSANTTTSTTA 377
QVWFSNRRAKWRREEKLR QR+ GS G+ ++A+T +T
Sbjct: 345 QVWFSNRRAKWRREEKLRRQRQNLMLGSNGTSSTADTNVTTNG 387
>gi|444301236|gb|AGD98731.1| paired box 6.2 [Callorhinchus milii]
Length = 302
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 98/164 (59%), Gaps = 28/164 (17%)
Query: 2 KVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSP 56
+V S + VLR LA ++ H ++ +YDKLRM N Q G W WY +T
Sbjct: 3 EVLSASGVLRTLATEE------HPMGADAMYDKLRMLNVQTGNWGARAGWYQENT----- 51
Query: 57 AHLALPHNPGSVTPISRDDAKEHESTSDINSE--PNSSADEDSQMRLRLKRKLQRNRTSF 114
+A N D ++ E D +S N ++SQ+RL+LKRKLQRNRTSF
Sbjct: 52 --VAGQGNA--------DGCQQLEVGGDNDSSVAANGEDSDESQIRLQLKRKLQRNRTSF 101
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T +QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 102 TQDQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 145
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 66/149 (44%), Gaps = 45/149 (30%)
Query: 152 QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WY-----PGST 201
+V S + VLR LA ++ H ++ +YDKLRM N Q G W WY G
Sbjct: 3 EVLSASGVLRTLATEE------HPMGADAMYDKLRMLNVQTGNWGARAGWYQENTVAGQG 56
Query: 202 PTPSPAHLALPHNPGSVTPISRDDA-----------------------------KEFERT 232
L + + S + +D+ KEFERT
Sbjct: 57 NADGCQQLEVGGDNDSSVAANGEDSDESQIRLQLKRKLQRNRTSFTQDQIEALEKEFERT 116
Query: 233 HYPDVFARERLADKIGLPEARIQVSSINR 261
HYPDVFARERLA KI LPEARIQV NR
Sbjct: 117 HYPDVFARERLAAKIDLPEARIQVWFSNR 145
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 40/76 (52%), Gaps = 27/76 (35%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR Q+ SS +P+N
Sbjct: 139 QVWFSNRRAKWRREEKLRNQRR-------------------------QACNGSSHVPIN- 172
Query: 399 GGFNPSSMYSSIPQPA 414
F P S+Y S+PQP
Sbjct: 173 SSFTP-SVYQSMPQPV 187
>gi|156915254|emb|CAO99176.1| Pax-6 transcription factor [Brachionus plicatilis]
Length = 336
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 97/176 (55%), Gaps = 38/176 (21%)
Query: 3 VSSINRVLRNLAAQKEQQ---ASAHN-----QTSETVYDKLRMFNGQPGW------AWYP 48
VSSINRVLRNLA++ AS+ N Q VYDKLRM N W AWY
Sbjct: 164 VSSINRVLRNLASKSFDSSPTASSSNGPSTAQADTNVYDKLRMLNNTQPWSAAHPSAWYV 223
Query: 49 GSTPPPSPAHLALP--------------HNPGSVTPISRDDAKEHESTSDINSEPNSS-- 92
PP+ A ++ N + ++D S+I+ + ++
Sbjct: 224 ----PPTMAMFSMNAQTSPSSHYQDQYHMNNSELAECKKEDLDSSNLNSEIDDDESAGFG 279
Query: 93 ----ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
DE++Q RLRLKRKLQRNRTSF+ EQID+LEKEFERTHYPDV+ARERLA KI
Sbjct: 280 TAADMDEETQARLRLKRKLQRNRTSFSQEQIDALEKEFERTHYPDVYARERLAQKI 335
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 227 KEFERTHYPDVFARERLADKI 247
KEFERTHYPDV+ARERLA KI
Sbjct: 315 KEFERTHYPDVYARERLAQKI 335
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 18/84 (21%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ---ASAHN-----QTSE 179
P +FA R+RL ++ + I VSSINRVLRNLA++ AS+ N Q
Sbjct: 139 PSIFAWEIRDRLLNENVCNQDNIPSVSSINRVLRNLASKSFDSSPTASSSNGPSTAQADT 198
Query: 180 TVYDKLRMFNGQPGW------AWY 197
VYDKLRM N W AWY
Sbjct: 199 NVYDKLRMLNNTQPWSAAHPSAWY 222
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 18/84 (21%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ---ASAHN-----QTSE 282
P +FA R+RL ++ + I VSSINRVLRNLA++ AS+ N Q
Sbjct: 139 PSIFAWEIRDRLLNENVCNQDNIPSVSSINRVLRNLASKSFDSSPTASSSNGPSTAQADT 198
Query: 283 TVYDKLRMFNGQPGW------AWY 300
VYDKLRM N W AWY
Sbjct: 199 NVYDKLRMLNNTQPWSAAHPSAWY 222
>gi|57283153|emb|CAE30302.1| Pax6.2 protein [Glomeris marginata]
Length = 228
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 88/148 (59%), Gaps = 34/148 (22%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPS------- 55
VSSINRVLRNLAAQKEQQA E+VYDKLRMFNGQ W WYPGS +
Sbjct: 87 VSSINRVLRNLAAQKEQQAG-----HESVYDKLRMFNGQS-WPWYPGSAAAAAAAAAAAA 140
Query: 56 -------------PAHLALPHNPGSVTPIS--------RDDAKEHESTSDINSEPNSSAD 94
PA A+ PG +S + +E TSD NS+ NSS D
Sbjct: 141 AAAAASASSQLSMPAIAAIVAPPGGHNGVSAARPPSDNKRGLDGNEGTSDGNSDRNSSGD 200
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
EDSQ+R+RLKRKLQRNRTSFTNEQI+SL
Sbjct: 201 EDSQLRMRLKRKLQRNRTSFTNEQIESL 228
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 57/92 (61%), Gaps = 11/92 (11%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +++R P +FA R+RL +D + + VSSINRVLRNLAAQK
Sbjct: 43 PRVATPSVVNKIADYKR-ECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLAAQK 101
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPG 302
EQQA E+VYDKLRMFNGQ W WYPG
Sbjct: 102 EQQAG-----HESVYDKLRMFNGQS-WPWYPG 127
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 10/76 (13%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLAAQKEQQA E+VYD
Sbjct: 58 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLAAQKEQQAG-----HESVYD 112
Query: 184 KLRMFNGQPGWAWYPG 199
KLRMFNGQ W WYPG
Sbjct: 113 KLRMFNGQS-WPWYPG 127
>gi|195133952|ref|XP_002011402.1| GI14081 [Drosophila mojavensis]
gi|193912025|gb|EDW10892.1| GI14081 [Drosophila mojavensis]
Length = 891
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 63/85 (74%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N A ED Q RL LKRKLQRNRTSFTNEQIDSLEKEFERTHYPD
Sbjct: 465 DETGSGEGENSNGCASNLGATEDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 524
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 525 VFARERLAGKIGLPEARIQVWFSNR 549
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 515 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 549
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLR+QRR
Sbjct: 543 QVWFSNRRAKWRREEKLRSQRR 564
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 163 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 221
Query: 161 RNLAAQKE 168
RNLAAQKE
Sbjct: 222 RNLAAQKE 229
>gi|195172576|ref|XP_002027073.1| ey [Drosophila persimilis]
gi|194112851|gb|EDW34894.1| ey [Drosophila persimilis]
Length = 896
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 82/132 (62%), Gaps = 18/132 (13%)
Query: 45 AWYPGSTP--PPSPAHLALP--HNPGSVTPISRDDA---------KEHESTSDINSEPNS 91
+ PGST P SP +LA HN S P++ DD + E+ S N
Sbjct: 389 VYAPGSTTSQPLSPPNLAGGGNHNHLSNCPMTTDDILLKKELDGHQSDETGSGEGENSNG 448
Query: 92 SAD-----EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
A ED Q RL LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA KIGL
Sbjct: 449 GASNIGNSEDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGL 508
Query: 147 PEARIQVSSINR 158
PEARIQV NR
Sbjct: 509 PEARIQVWFSNR 520
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 486 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 520
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 514 QVWFSNRRAKWRREEKLRNQRR 535
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 159 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 217
Query: 161 RNLAAQKEQQ 170
RNLAAQKEQQ
Sbjct: 218 RNLAAQKEQQ 227
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 273
P +FA R+RL + I VSSINRVLRNLAAQKEQQ
Sbjct: 185 PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 227
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSINRVLRNLAAQKEQQ
Sbjct: 210 VSSINRVLRNLAAQKEQQ 227
>gi|20278916|gb|AAM18641.1|AF384972_1 Pax6 [Scyliorhinus canicula]
Length = 131
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 84/133 (63%), Gaps = 24/133 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPGS+ P P
Sbjct: 18 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGAWGTRPGWYPGSSVPGQPN 71
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ INS NS +++QMRL+LKRKLQRNRTSFT E
Sbjct: 72 QDGCQQQEGGA-----------ENTNSINS--NSDDSDEAQMRLQLKRKLQRNRTSFTQE 118
Query: 118 QIDSLEKEFERTH 130
QI++LEKEFERTH
Sbjct: 119 QIEALEKEFERTH 131
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPA 207
VSSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPGS+ P
Sbjct: 18 VSSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQTGAWGTRPGWYPGSSVPGQPN 71
Query: 208 HLALPHNPG 216
G
Sbjct: 72 QDGCQQQEG 80
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPA 310
VSSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPGS+ P
Sbjct: 18 VSSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQTGAWGTRPGWYPGSSVPGQPN 71
Query: 311 HLALPHNPG 319
G
Sbjct: 72 QDGCQQQEG 80
>gi|198462210|ref|XP_001352371.2| ey [Drosophila pseudoobscura pseudoobscura]
gi|198139686|gb|EAL29360.2| ey [Drosophila pseudoobscura pseudoobscura]
Length = 896
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 82/132 (62%), Gaps = 18/132 (13%)
Query: 45 AWYPGSTP--PPSPAHLALP--HNPGSVTPISRDDA---------KEHESTSDINSEPNS 91
+ PGST P SP +LA HN S P++ DD + E+ S N
Sbjct: 389 VYAPGSTTSQPLSPPNLAGGGNHNHLSNCPMTTDDILLKKELDGHQSDETGSGEGENSNG 448
Query: 92 SAD-----EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
A ED Q RL LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA KIGL
Sbjct: 449 GASNIGNSEDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGL 508
Query: 147 PEARIQVSSINR 158
PEARIQV NR
Sbjct: 509 PEARIQVWFSNR 520
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 486 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 520
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 514 QVWFSNRRAKWRREEKLRNQRR 535
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 159 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 217
Query: 161 RNLAAQKEQQ 170
RNLAAQKEQQ
Sbjct: 218 RNLAAQKEQQ 227
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 273
P +FA R+RL + I VSSINRVLRNLAAQKEQQ
Sbjct: 185 PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 227
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSINRVLRNLAAQKEQQ
Sbjct: 210 VSSINRVLRNLAAQKEQQ 227
>gi|242009922|ref|XP_002425731.1| Homeobox protein orthopedia, putative [Pediculus humanus corporis]
gi|212509632|gb|EEB12993.1| Homeobox protein orthopedia, putative [Pediculus humanus corporis]
Length = 293
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 72/95 (75%), Gaps = 3/95 (3%)
Query: 67 SVTPISRDDAKEHE-STSDINSEPNSSAD--EDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S++P + A + S+ NS SSA ED Q RLRLKRKLQRNRTSFTN+QIDSLE
Sbjct: 10 SLSPCDLEGATSDDISSGGDNSNAGSSAGNPEDDQARLRLKRKLQRNRTSFTNDQIDSLE 69
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 70 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 104
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 70 KEFERTHYPDVFARERLAAKIGLPEARIQVWFSNR 104
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 98 QVWFSNRRAKWRREEKLRNQRR 119
>gi|195064323|ref|XP_001996545.1| GH24002 [Drosophila grimshawi]
gi|193892091|gb|EDV90957.1| GH24002 [Drosophila grimshawi]
Length = 797
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTNEQIDSLEKEFERTHYPD
Sbjct: 463 DETGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 522
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 523 VFARERLAGKIGLPEARIQVWFSNR 547
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 513 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 547
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 541 QVWFSNRRAKWRREEKLRNQRR 562
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 145 GLPEARIQVSSINRVLRNLAAQKEQQ 170
GL + +VSSINRVLRNLAAQKEQQ
Sbjct: 206 GLGDVGPRVSSINRVLRNLAAQKEQQ 231
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 248 GLPEARIQVSSINRVLRNLAAQKEQQ 273
GL + +VSSINRVLRNLAAQKEQQ
Sbjct: 206 GLGDVGPRVSSINRVLRNLAAQKEQQ 231
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/19 (94%), Positives = 19/19 (100%)
Query: 2 KVSSINRVLRNLAAQKEQQ 20
+VSSINRVLRNLAAQKEQQ
Sbjct: 213 RVSSINRVLRNLAAQKEQQ 231
>gi|195450767|ref|XP_002072624.1| GK13702 [Drosophila willistoni]
gi|194168709|gb|EDW83610.1| GK13702 [Drosophila willistoni]
Length = 951
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTNEQIDSLEKEFERTHYPD
Sbjct: 496 DETGSGEGENSNGGVSNIGNSEDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 555
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 556 VFARERLAGKIGLPEARIQVWFSNR 580
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 546 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 580
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 574 QVWFSNRRAKWRREEKLRNQRR 595
>gi|194768292|ref|XP_001966246.1| GF22818 [Drosophila ananassae]
gi|190618548|gb|EDV34072.1| GF22818 [Drosophila ananassae]
Length = 900
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Query: 57 AHLALPHNPGSVTPISRDDAKEHESTSDINSE------PNSSADEDSQMRLRLKRKLQRN 110
+H P NP ++ D + + T+ E N ED Q RL LKRKLQRN
Sbjct: 413 SHRLCPINPEDISLKKELDGHQSDETNSGEGENSNGGTSNVGNSEDDQARLILKRKLQRN 472
Query: 111 RTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RTSFTNEQID+LEKEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 473 RTSFTNEQIDNLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 520
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 486 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 520
>gi|195402299|ref|XP_002059744.1| eyeless [Drosophila virilis]
gi|194155958|gb|EDW71142.1| eyeless [Drosophila virilis]
Length = 906
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 463 DETGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 522
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 523 VFARERLAGKIGLPEARIQVWFSNR 547
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 513 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 547
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 541 QVWFSNRRAKWRREEKLRNQRR 562
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 164 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQESVCTNDNIPSVSSINRVL 222
Query: 161 RNLAAQKEQQ 170
RNLAAQKEQQ
Sbjct: 223 RNLAAQKEQQ 232
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 235 PDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
P +FA E L + + + VSSINRVLRNLAAQKEQQ
Sbjct: 190 PSIFAWEIRDRLLQESVCTNDNIPSVSSINRVLRNLAAQKEQQ 232
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSINRVLRNLAAQKEQQ
Sbjct: 215 VSSINRVLRNLAAQKEQQ 232
>gi|195469385|ref|XP_002099618.1| GE14559 [Drosophila yakuba]
gi|194185719|gb|EDW99330.1| GE14559 [Drosophila yakuba]
Length = 898
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 63/85 (74%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N +ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 437 DETGSGEGENSNGGASNIGNNEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 496
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 497 VFARERLAGKIGLPEARIQVWFSNR 521
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 487 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 521
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 162 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 220
Query: 161 RNLAAQKEQQASAHNQT 177
RNLAAQKEQQ++ T
Sbjct: 221 RNLAAQKEQQSTGSCST 237
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQT 280
P +FA R+RL + I VSSINRVLRNLAAQKEQQ++ T
Sbjct: 188 PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQSTGSCST 237
>gi|263359659|gb|ACY70495.1| hypothetical protein DVIR88_6g0032 [Drosophila virilis]
Length = 909
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 463 DETGSGEGDNSNGGASNIGTSEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 522
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 523 VFARERLAGKIGLPEARIQVWFSNR 547
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 513 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 547
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 541 QVWFSNRRAKWRREEKLRNQRR 562
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 164 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQESVCTNDNIPSVSSINRVL 222
Query: 161 RNLAAQKEQQ 170
RNLAAQKEQQ
Sbjct: 223 RNLAAQKEQQ 232
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 235 PDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
P +FA E L + + + VSSINRVLRNLAAQKEQQ
Sbjct: 190 PSIFAWEIRDRLLQESVCTNDNIPSVSSINRVLRNLAAQKEQQ 232
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSINRVLRNLAAQKEQQ
Sbjct: 215 VSSINRVLRNLAAQKEQQ 232
>gi|194913493|ref|XP_001982710.1| GG16399 [Drosophila erecta]
gi|190647926|gb|EDV45229.1| GG16399 [Drosophila erecta]
Length = 900
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 63/85 (74%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N +ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 439 DETGSGEGENSNGGASNIGNNEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 498
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 499 VFARERLAGKIGLPEARIQVWFSNR 523
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 489 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 523
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 517 QVWFSNRRAKWRREEKLRNQRR 538
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 162 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 220
Query: 161 RNLAAQKEQQ 170
RNLAAQKEQQ
Sbjct: 221 RNLAAQKEQQ 230
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 273
P +FA R+RL + I VSSINRVLRNLAAQKEQQ
Sbjct: 188 PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSINRVLRNLAAQKEQQ
Sbjct: 213 VSSINRVLRNLAAQKEQQ 230
>gi|195354419|ref|XP_002043695.1| ey [Drosophila sechellia]
gi|194128883|gb|EDW50926.1| ey [Drosophila sechellia]
Length = 899
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 63/85 (74%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N +ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 438 DETGSGEGENSNGGASNIGNNEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 497
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 498 VFARERLAGKIGLPEARIQVWFSNR 522
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 488 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 522
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 516 QVWFSNRRAKWRREEKLRNQRR 537
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 162 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 220
Query: 161 RNLAAQKEQQ 170
RNLAAQKEQQ
Sbjct: 221 RNLAAQKEQQ 230
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 273
P +FA R+RL + I VSSINRVLRNLAAQKEQQ
Sbjct: 188 PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 230
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSINRVLRNLAAQKEQQ
Sbjct: 213 VSSINRVLRNLAAQKEQQ 230
>gi|24638704|ref|NP_726607.1| eyeless, isoform B [Drosophila melanogaster]
gi|22759376|gb|AAN06513.1| eyeless, isoform B [Drosophila melanogaster]
gi|40882541|gb|AAR96182.1| GH01157p [Drosophila melanogaster]
gi|220952578|gb|ACL88832.1| ey-PB [synthetic construct]
Length = 624
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 164 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 223
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 224 VFARERLAGKIGLPEARIQVWFSNR 248
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 214 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 248
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 242 QVWFSNRRAKWRREEKLRNQRR 263
>gi|641810|emb|CAA56038.1| transcription factor [Drosophila melanogaster]
Length = 838
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 378 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 437
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 438 VFARERLAGKIGLPEARIQVWFSNR 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 428 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 462
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 456 QVWFSNRRAKWRREEKLRNQRR 477
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 102 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 160
Query: 161 RNLAAQKE 168
RNLAAQKE
Sbjct: 161 RNLAAQKE 168
>gi|62473168|ref|NP_001014694.1| eyeless, isoform C [Drosophila melanogaster]
gi|61677929|gb|AAX52513.1| eyeless, isoform C [Drosophila melanogaster]
Length = 857
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 397 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 456
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 457 VFARERLAGKIGLPEARIQVWFSNR 481
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 447 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 481
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 475 QVWFSNRRAKWRREEKLRNQRR 496
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 121 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 179
Query: 161 RNLAAQKE 168
RNLAAQKE
Sbjct: 180 RNLAAQKE 187
>gi|62473159|ref|NP_001014693.1| eyeless, isoform D [Drosophila melanogaster]
gi|61677928|gb|AAX52512.1| eyeless, isoform D [Drosophila melanogaster]
Length = 898
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 438 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 497
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 498 VFARERLAGKIGLPEARIQVWFSNR 522
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 488 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 522
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 516 QVWFSNRRAKWRREEKLRNQRR 537
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 162 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 220
Query: 161 RNLAAQKE 168
RNLAAQKE
Sbjct: 221 RNLAAQKE 228
>gi|12643549|sp|O18381.3|PAX6_DROME RecName: Full=Paired box protein Pax-6; AltName: Full=Protein
eyeless
Length = 857
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 397 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 456
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 457 VFARERLAGKIGLPEARIQVWFSNR 481
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 447 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 481
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 475 QVWFSNRRAKWRREEKLRNQRR 496
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 121 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 179
Query: 161 RNLAAQKE 168
RNLAAQKE
Sbjct: 180 RNLAAQKE 187
>gi|24638702|ref|NP_524628.2| eyeless, isoform A [Drosophila melanogaster]
gi|7304285|gb|AAF59318.1| eyeless, isoform A [Drosophila melanogaster]
Length = 838
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 62/85 (72%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q RL LKRKLQRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 378 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 437
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 438 VFARERLAGKIGLPEARIQVWFSNR 462
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 428 KEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 462
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 456 QVWFSNRRAKWRREEKLRNQRR 477
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 102 RAIGGSKPRVATAEVVSKISQYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVL 160
Query: 161 RNLAAQKE 168
RNLAAQKE
Sbjct: 161 RNLAAQKE 168
>gi|322789454|gb|EFZ14745.1| hypothetical protein SINV_03251 [Solenopsis invicta]
Length = 105
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 65/79 (82%), Gaps = 4/79 (5%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
N+ S +D Q RLRLKRKLQRNRTSF+NEQID+LEKEFERTHYPDVFARERLA KIG
Sbjct: 29 NAGSVSGGADDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIG 88
Query: 146 LPEARIQVSSINRVLRNLA 164
LPEARIQV+ + RN+A
Sbjct: 89 LPEARIQVT----IQRNVA 103
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 35/41 (85%), Gaps = 4/41 (9%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 267
KEFERTHYPDVFARERLA KIGLPEARIQV+ + RN+A
Sbjct: 67 KEFERTHYPDVFARERLAGKIGLPEARIQVT----IQRNVA 103
>gi|393906366|gb|EJD74258.1| hypothetical protein LOAG_18403 [Loa loa]
Length = 290
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 78/113 (69%), Gaps = 6/113 (5%)
Query: 46 WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKR 105
WY P P + L P S+T + D K+ SD + +P + DED+ R+RLKR
Sbjct: 17 WY-NQWPMGVPGAVGLAQLP-SLTQANHTDKKD----SDEDQKPPNDPDEDAAARMRLKR 70
Query: 106 KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KLQRNRTSF+ EQI++LEKEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 71 KLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 123
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 89 KEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 123
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR-----------GSTGSVNSANTTTSTTALDHVPPTSQS 387
QVWFSNRRAKWRREEKLRNQ+R S S NSA ++ +T + P +
Sbjct: 117 QVWFSNRRAKWRREEKLRNQKRPPGMDTTMATANSNISANSAAGSSGSTQSSLLNPGNTG 176
Query: 388 PPPSSRLPLNPGGFN----------PSSMYSSIPQPAGMD--SYNPSCLQQAAREHHHHS 435
P S P FN PS+ +PQP MD S+ + L A +H
Sbjct: 177 TPLGSSPAATPARFNNPVISGSFVPPSTQMYPLPQPT-MDPYSFANAGLGMGAPQHQPDF 235
Query: 436 SYSYMF-------HDSLHSLQSAYQRAAPAAHSSPHPH 466
S +MF +D+ H Q AP +S H
Sbjct: 236 SSYHMFTGTGRSPYDAFHPYARTVQAGAPPTFASTMNH 273
>gi|334331633|ref|XP_001368528.2| PREDICTED: paired box protein Pax-6 isoform 1 [Monodelphis
domestica]
Length = 553
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 69/91 (75%), Gaps = 4/91 (4%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDS---QMRLRLKRKLQRNRTSFTNEQIDSLEKEFE 127
I RD ++ E + N+ SS EDS QMRL+LKRKLQRNRTSFT EQI++LEKEFE
Sbjct: 303 IRRDGCQQQEGGGE-NTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFE 361
Query: 128 RTHYPDVFARERLADKIGLPEARIQVSSINR 158
RTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 362 RTHYPDVFARERLAAKIDLPEARIQVWFSNR 392
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 358 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 392
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 386 QVWFSNRRAKWRREEKLRNQRR 407
>gi|390349964|ref|XP_003727316.1| PREDICTED: paired box protein Pax-6-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 67/93 (72%), Gaps = 8/93 (8%)
Query: 94 DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
DED+Q RLRLKRKLQRNRTSFT +QI+ LEKEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 33 DEDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARIQV 92
Query: 154 SSINR--------VLRNLAAQKEQQASAHNQTS 178
NR LRN Q+ + H Q+S
Sbjct: 93 WFSNRRAKWRREEKLRNQRRQQAEVGGVHTQSS 125
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 40/63 (63%), Gaps = 8/63 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR--------VLRNLAAQKEQQASAHN 278
KEFERTHYPDVFARERLA KI LPEARIQV NR LRN Q+ + H
Sbjct: 63 KEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQQAEVGGVHT 122
Query: 279 QTS 281
Q+S
Sbjct: 123 QSS 125
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 61/140 (43%), Gaps = 38/140 (27%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR V +T + SS LPL+
Sbjct: 91 QVWFSNRRAKWRREEKLRNQRR-QQAEVGGVHTQS-----------------SSHLPLSS 132
Query: 399 G-GFNPSSMYSSIPQPAG-----------------MDSYNPSCLQQAAREHHHHSSYSYM 440
G N S+Y IPQP+ M S++ + + SSY+ M
Sbjct: 133 GYSTNNVSVYQPIPQPSAATMVPRTAPDSYSAIPPMPSFSMASGPNIGMQPRDTSSYTRM 192
Query: 441 FHDSLHSLQSAYQRAAPAAH 460
H H S Y +AP H
Sbjct: 193 LHQPSHGYDSLY--SAPPNH 210
>gi|241681430|ref|XP_002411608.1| paired box protein Pax-6, putative [Ixodes scapularis]
gi|215504348|gb|EEC13842.1| paired box protein Pax-6, putative [Ixodes scapularis]
Length = 433
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 101/162 (62%), Gaps = 23/162 (14%)
Query: 2 KVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW-----AWYPGSTPPPSP 56
+VSSINRVLRNLAAQKEQQ + + VYDKLR+ +G W PG PP P
Sbjct: 118 QVSSINRVLRNLAAQKEQQQA----AVQGVYDKLRVLSGAGALAGSAACWPPGPWHPPPP 173
Query: 57 AHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
AL H + ++ E S D+++ RLRLKRKLQRNRTSF+
Sbjct: 174 QPTAL--------------QPSHPLAAALDPESQESGDDEAAARLRLKRKLQRNRTSFSM 219
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 261
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 23/24 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGS 362
QVWFSNRRAKWRREEKLR+QRR S
Sbjct: 255 QVWFSNRRAKWRREEKLRSQRRDS 278
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 214 NPGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP F+R P +FA R+RL + + A QVSSINRVLRNLAAQK
Sbjct: 75 KPRVATPDVVSKIAGFKR-ECPSIFAWEIRDRLLSEGIVLGAAAQVSSINRVLRNLAAQK 133
Query: 271 EQQASAHNQTSETVYDKLRM 290
EQQ + + VYDKLR+
Sbjct: 134 EQQQA----AVQGVYDKLRV 149
>gi|301618353|ref|XP_002938577.1| PREDICTED: paired box protein Pax-6-like [Xenopus (Silurana)
tropicalis]
Length = 281
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
Query: 34 KLRMFNGQPGWAWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSA 93
K+RM N Q G AW GS ++ + ++ D ++ +S+ D +P ++
Sbjct: 9 KIRMLNIQNG-AW--GSRQDWYQDNIVTGQSNTTI-----DSCQQLDSSLDSEHQPGAAN 60
Query: 94 DE--DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
D+ +SQ+RL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARI
Sbjct: 61 DDLDESQIRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARI 120
Query: 152 QVSSINR 158
QV NR
Sbjct: 121 QVWFSNR 127
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 93 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 127
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 121 QVWFSNRRAKWRREEKLRNQRR 142
>gi|56714093|gb|AAW24017.1| homeodomain protein Pax6 [Oikopleura dioica]
Length = 414
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 90/158 (56%), Gaps = 24/158 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPP-PSPAHLA 60
VSSINRVLRN K +S PG +W P +T P A+ +
Sbjct: 150 VSSINRVLRNFQNDKMVGSSP------------------PGSLSWSPDTTANWPFAANSS 191
Query: 61 LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQID 120
+ S ++D + S SD E D D Q RL+LKRKLQRNRTSFT +QI+
Sbjct: 192 VDFGTPSADS-TKDTSASSISASD---EDRVKEDPDIQARLQLKRKLQRNRTSFTQQQIE 247
Query: 121 SLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
SLE EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 248 SLESEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 285
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 228 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 252 EFERTHYPDVFARERLATKIGLPEARIQVWFSNR 285
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP--- 395
QVWFSNRRAKWRREEK+RNQR ++ NS + T P S P +S +P
Sbjct: 279 QVWFSNRRAKWRREEKMRNQRPATSAHSNSYYPSIKTEHSTGSSPISGYPAMASGIPNSA 338
Query: 396 ------LNPGGFNPSSMYSSIPQPAGMDSYNP--SCLQQAAREHHHHSSYSYMFHDSLHS 447
+NP + S M+S +G +Y+P SC+ +A S+YS D L +
Sbjct: 339 SAVSDVVNPAAY--SGMHSMTQNSSG--AYDPSYSCMLNSA-----FSTYSGNQADLLQN 389
Query: 448 LQS 450
L +
Sbjct: 390 LMT 392
>gi|402590573|gb|EJW84503.1| homeobox domain-containing protein, partial [Wuchereria bancrofti]
Length = 234
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 62/73 (84%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P + DED+ R+RLKRKLQRNRTSF+ EQI++LEKEFERTHYPDVFARERLA KIG
Sbjct: 2 DQKPPNDPDEDTAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIG 61
Query: 146 LPEARIQVSSINR 158
LPEARIQV NR
Sbjct: 62 LPEARIQVWFSNR 74
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 40 KEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 74
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 71/159 (44%), Gaps = 33/159 (20%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR-----------GSTGSVNSANTTTSTTALDHVPPTSQS 387
QVWFSNRRAKWRREEKLRNQ+R S S NSA ++ +T + P S
Sbjct: 68 QVWFSNRRAKWRREEKLRNQKRPPGMDTAMAPANSNVSANSAAGSSGSTQGSLLNPGSTG 127
Query: 388 PPPSSRLPLNPGGFN---------PSS--MYSSIPQPAGMD--SYNPSCLQQAAREHHHH 434
P S P FN PSS MY +PQP MD S+ + L A +H
Sbjct: 128 TPLGSSPTTTPARFNNPVISSNFAPSSTQMY-PLPQPT-MDPYSFANAGLGMGAAQHPSD 185
Query: 435 SSYSYMF-------HDSLHSLQSAYQRAAPAAHSSPHPH 466
S +MF +D+ H Q AP +S H
Sbjct: 186 FSSYHMFSGTGRSPYDAFHPYARTVQPGAPPTFASTMNH 224
>gi|170588511|ref|XP_001899017.1| Homeobox domain containing protein [Brugia malayi]
gi|158593230|gb|EDP31825.1| Homeobox domain containing protein [Brugia malayi]
Length = 243
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 62/73 (84%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P + DED+ R+RLKRKLQRNRTSF+ EQI++LEKEFERTHYPDVFARERLA KIG
Sbjct: 9 DQKPPNDPDEDTAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIG 68
Query: 146 LPEARIQVSSINR 158
LPEARIQV NR
Sbjct: 69 LPEARIQVWFSNR 81
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 47 KEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 81
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 70/161 (43%), Gaps = 35/161 (21%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR-----------GSTGSVNSANTTTSTTALDHVPPTSQS 387
QVWFSNRRAKWRREEKLRNQ+R S S NSA ++ +T + P S
Sbjct: 75 QVWFSNRRAKWRREEKLRNQKRPPGMDTAMAPASSNVSANSAAGSSGSTQGSLLNPGSTG 134
Query: 388 PPPSSRLPLNPGGFN---------PSS--MYSSIPQPAGMDSYNPSC----LQQAAREHH 432
P S P FN PSS MY + QP MD Y+ S L A +H
Sbjct: 135 TPLGSSPTTTPARFNNPVISSNFAPSSTQMY-PLSQPT-MDPYSFSFANAGLGMGAPQHP 192
Query: 433 HHSSYSYMF-------HDSLHSLQSAYQRAAPAAHSSPHPH 466
S +MF +D+ H Q AP +S H
Sbjct: 193 SDFSSYHMFSGTGRSPYDAFHPYTRTVQPGAPPTFASTMNH 233
>gi|327276026|ref|XP_003222772.1| PREDICTED: paired box protein Pax-6-like [Anolis carolinensis]
Length = 278
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 86/139 (61%), Gaps = 26/139 (18%)
Query: 29 ETVYDKLRMFNGQ-PGWA----WYPGS--TPPPSPAHLALPHNPGSVTPISRDDAKEHES 81
+ +Y+K RM N Q W WY S T PP+P D ++ ES
Sbjct: 4 DGMYEKSRMLNIQNSTWGGRQEWYQDSLVTGPPNP-----------------DSCQQLES 46
Query: 82 TSD-INSEPNSSADED-SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
D + + SS D D SQ+RL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARER
Sbjct: 47 GLDPEHPQGASSQDLDESQIRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 106
Query: 140 LADKIGLPEARIQVSSINR 158
LA KI LPEARIQV NR
Sbjct: 107 LAAKIDLPEARIQVWFSNR 125
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 91 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 125
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR--GSTG---SVNSANTTTSTTALDHVPPTSQSPPPSSR 393
QVWFSNRRAKWRREEKLRNQRR G TG ++NS+ T +T +P P S
Sbjct: 119 QVWFSNRRAKWRREEKLRNQRRQAGGTGGHLTINSSFGTGGSTVYQSLP-----QPTGSG 173
Query: 394 LPLNPGGFNPSSMYSSIPQPAGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQ 453
L S+ Y ++P N +Q SSYS M S S +Y
Sbjct: 174 TMLGRTESALSNNYGALPPLPTFSMANSLPIQAVPPVASQTSSYSCMLPGS--SSVRSYD 231
Query: 454 RAAPAAHSSPHPHPAHPGSSPYGTSNSVNG 483
P+ SS + P++ S+ G + G
Sbjct: 232 SYTPSQLSSHNLSPSNGASTGNGRVGGIAG 261
>gi|410895927|ref|XP_003961451.1| PREDICTED: paired box protein Pax-6-like [Takifugu rubripes]
Length = 276
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 65/89 (73%), Gaps = 18/89 (20%)
Query: 70 PISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
P+ RDDA E+SQ+RL+LKRKLQRNRTSFT EQI++LEKEFERT
Sbjct: 58 PVERDDA------------------EESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERT 99
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVFARERLA+KI LPEARIQV NR
Sbjct: 100 HYPDVFARERLANKIDLPEARIQVWFSNR 128
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 94 KEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 128
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN------TTTSTTALDHVPPTSQSPP--- 389
QVWFSNRRAKWRREEKLRNQRR +G V S + TT+ T++ H S S P
Sbjct: 122 QVWFSNRRAKWRREEKLRNQRR--SGGVTSCSQSQAPLTTSFNTSVYHQQHGSSSGPMLS 179
Query: 390 -PSSRLPLNPGGFNPSSMYSSIPQPAGMDSYNPSCL 424
S LP SS SIP P SY SC+
Sbjct: 180 QAESALPSYSSLSVFSSGVQSIP-PQSASSY--SCM 212
>gi|351714944|gb|EHB17863.1| Paired box protein Pax-6 [Heterocephalus glaber]
Length = 1055
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARER
Sbjct: 818 ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 875
Query: 140 LADKIGLPEARIQVSSINR 158
LA KI LPEARIQV NR
Sbjct: 876 LAAKIDLPEARIQVWFSNR 894
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 860 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 894
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 66/131 (50%), Gaps = 25/131 (19%)
Query: 214 NPGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQ 269
P TP +++R P +FA R+RL + I VSSINRVLRNLA++
Sbjct: 559 KPRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASE 617
Query: 270 KEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST-------PTPSPAHLALPHN 317
K+Q ++ +YDKLRM NGQ G W WYPG++ T SP +A P
Sbjct: 618 KQQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQGTLSPLWVAPPQP 671
Query: 318 PGS--VTPISR 326
GS V P+ R
Sbjct: 672 EGSPAVLPLGR 682
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 25/137 (18%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 553 RAIGGSKPRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVL 611
Query: 161 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST-------PTPSPAH 208
RNLA++K+Q ++ +YDKLRM NGQ G W WYPG++ T SP
Sbjct: 612 RNLASEKQQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQGTLSPLW 665
Query: 209 LALPHNPGS--VTPISR 223
+A P GS V P+ R
Sbjct: 666 VAPPQPEGSPAVLPLGR 682
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 11/64 (17%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPG++ P P
Sbjct: 604 VSSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 657
Query: 58 HLAL 61
L
Sbjct: 658 QGTL 661
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 888 QVWFSNRRAKWRREEKLRNQRR 909
>gi|326919723|ref|XP_003206127.1| PREDICTED: paired box protein Pax-6-like [Meleagris gallopavo]
Length = 377
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARER
Sbjct: 146 ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 203
Query: 140 LADKIGLPEARIQVSSINR 158
LA KI LPEARIQV NR
Sbjct: 204 LAAKIDLPEARIQVWFSNR 222
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 188 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 222
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 203 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 237
>gi|1835186|emb|CAA71094.1| Pax-6 [Phallusia mammillata]
Length = 464
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 109/190 (57%), Gaps = 35/190 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNL NG+ G + G++P + HL
Sbjct: 152 VSSINRVLRNL-------------------------NGENGRVFSEGNSP--NKNHLPDD 184
Query: 63 HNPGSVTPISRDDAKEHESTSD---INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQI 119
+ + +++ + + HES+S+ + ++ + +D+ RL+LKRKLQRNRTSF+ EQ+
Sbjct: 185 WSSSNWYDLNKQNHR-HESSSEEVSVCNKDDQQMTKDTNARLQLKRKLQRNRTSFSQEQV 243
Query: 120 DSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSE 179
++LEKEFERTHYPDVFARERLA KI LPEARIQV NR A + ++ H + S
Sbjct: 244 EALEKEFERTHYPDVFARERLASKIDLPEARIQVWFSNR----RAKWRREEKMRHQRGSN 299
Query: 180 TVYDKLRMFN 189
++ + L+ N
Sbjct: 300 SLNENLQQSN 309
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLA KI LPEARIQV NR A + ++ H + S ++ +
Sbjct: 248 KEFERTHYPDVFARERLASKIDLPEARIQVWFSNR----RAKWRREEKMRHQRGSNSLNE 303
Query: 287 KLRMFN 292
L+ N
Sbjct: 304 NLQQSN 309
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWFSNRRAKWRREEK+R+QR
Sbjct: 276 QVWFSNRRAKWRREEKMRHQR 296
>gi|345305654|ref|XP_003428362.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6-like
[Ornithorhynchus anatinus]
Length = 704
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 70 PISRDDAKEHESTSDINSEPNSSADEDS---QMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
PI D E + N+ SS EDS QMRL+LKRKLQRNRTSFT EQI++LEKEF
Sbjct: 453 PIIPDGCSSQEGGGE-NTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEF 511
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINR 158
ERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 512 ERTHYPDVFARERLAAKIDLPEARIQVWFSNR 543
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 509 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 543
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 27/75 (36%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEKLRNQRR A+TT S H+P +S
Sbjct: 537 QVWFSNRRAKWRREEKLRNQRR-------QASTTPS-----HIPISSS------------ 572
Query: 399 GGFNPSSMYSSIPQP 413
F+ +S+Y IPQP
Sbjct: 573 --FS-TSVYQPIPQP 584
>gi|317419326|emb|CBN81363.1| Paired box gene 6b [Dicentrarchus labrax]
Length = 276
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
E+SQ+RL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA+KI LPEARIQV
Sbjct: 65 EESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVW 124
Query: 155 SINR 158
NR
Sbjct: 125 FSNR 128
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 94 KEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 128
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 8/48 (16%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN------TTTSTTALDH 380
QVWFSNRRAKWRREEKLRNQRR +G V S + TT+ T++ H
Sbjct: 122 QVWFSNRRAKWRREEKLRNQRR--SGGVTSCSQSQAPLTTSFNTSVYH 167
>gi|432924264|ref|XP_004080546.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
Length = 290
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
E+SQ+RL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA+KI LPEARIQV
Sbjct: 66 EESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVW 125
Query: 155 SINR 158
NR
Sbjct: 126 FSNR 129
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 95 KEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 129
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 27/32 (84%), Gaps = 2/32 (6%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN 370
QVWFSNRRAKWRREEKLRNQRR +G V S +
Sbjct: 123 QVWFSNRRAKWRREEKLRNQRR--SGGVTSCS 152
>gi|449501716|ref|XP_004176235.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
[Taeniopygia guttata]
Length = 546
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARER
Sbjct: 315 ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 372
Query: 140 LADKIGLPEARIQVSSINR 158
LA KI LPEARIQV NR
Sbjct: 373 LAAKIDLPEARIQVWFSNR 391
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 357 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 391
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 385 QVWFSNRRAKWRREEKLRNQRR 406
>gi|348502261|ref|XP_003438687.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
Length = 276
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
E+SQ+RL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA+KI LPEARIQV
Sbjct: 66 EESQLRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEARIQVW 125
Query: 155 SINR 158
NR
Sbjct: 126 FSNR 129
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA+KI LPEARIQV NR
Sbjct: 95 KEFERTHYPDVFARERLANKIDLPEARIQVWFSNR 129
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 27/32 (84%), Gaps = 2/32 (6%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN 370
QVWFSNRRAKWRREEKLRNQRR +G V S +
Sbjct: 123 QVWFSNRRAKWRREEKLRNQRR--SGGVTSCS 152
>gi|338727409|ref|XP_001918200.2| PREDICTED: paired box protein Pax-6 [Equus caballus]
Length = 395
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARER
Sbjct: 158 ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 215
Query: 140 LADKIGLPEARIQVSSINR 158
LA KI LPEARIQV NR
Sbjct: 216 LAAKIDLPEARIQVWFSNR 234
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 200 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 234
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 228 QVWFSNRRAKWRREEKLRNQRR 249
>gi|312080137|ref|XP_003142472.1| hypothetical protein LOAG_06889 [Loa loa]
Length = 127
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/65 (81%), Positives = 58/65 (89%)
Query: 94 DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
DED+ R+RLKRKLQRNRTSF+ EQI++LEKEFERTHYPDVFARERLA KIGLPEARIQV
Sbjct: 19 DEDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARIQV 78
Query: 154 SSINR 158
NR
Sbjct: 79 WFSNR 83
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 31/35 (88%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 49 KEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 83
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR--GSTGSVNSANTTTS 374
QVWFSNRRAKWRREEKLRNQ+R G ++ +AN+ S
Sbjct: 77 QVWFSNRRAKWRREEKLRNQKRPPGMDTTMATANSNIS 114
>gi|63028387|gb|AAY27075.1| Pax6 [Oikopleura dioica]
Length = 412
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 66/86 (76%), Gaps = 7/86 (8%)
Query: 80 ESTSDINSEPNSSADEDS-------QMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
+ST D ++ S++DED Q RL+LKRKLQRNRTSFT +QI+SLE EFERTHYP
Sbjct: 198 DSTKDTSASSISASDEDRVKEDPDIQARLQLKRKLQRNRTSFTQQQIESLESEFERTHYP 257
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DVFARERLA KIGLPEARIQV NR
Sbjct: 258 DVFARERLATKIGLPEARIQVWFSNR 283
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 228 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 250 EFERTHYPDVFARERLATKIGLPEARIQVWFSNR 283
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 24/125 (19%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWRREEK+RN+R ++ NS + T P S P +S +P
Sbjct: 277 QVWFSNRRAKWRREEKMRNRRPATSAHSNSYYPSIKTEHSTGSSPVSGYPAMASGIP--- 333
Query: 399 GGFNPSSMYSSIPQP---AGMDS--------YNP--SCLQQAAREHHHHSSYSYMFHDSL 445
NP+S S + P +GM S Y+P SC+ +A SSYS D L
Sbjct: 334 ---NPASAVSDVVNPGAYSGMHSMTQNSSAAYDPSYSCMLNSA-----FSSYSGNQADLL 385
Query: 446 HSLQS 450
+L +
Sbjct: 386 QNLMT 390
>gi|170040723|ref|XP_001848139.1| paired box protein Pax-6 [Culex quinquefasciatus]
gi|167864322|gb|EDS27705.1| paired box protein Pax-6 [Culex quinquefasciatus]
Length = 559
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 103/186 (55%), Gaps = 19/186 (10%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVY-------DKLRMFNGQPGWAWYPGSTPPPS 55
VSSINRVLRNLAAQKE H Q S + D+ + G G + P
Sbjct: 172 VSSINRVLRNLAAQKEFSKKPHAQESSNIKPSSAGPSDENK---GSFGKHCFTNLDSP-- 226
Query: 56 PAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFT 115
+ L G + P S ++ + +++ N +D + RL LKRKLQRNRTSFT
Sbjct: 227 ---VGLGTAGGGLKP-SPQQQQQQQQQQQQSAQVNFDSDSE---RLSLKRKLQRNRTSFT 279
Query: 116 NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+QI+ LEKEFERTHYPDVF+RERL+ K LPEARIQV NR + +K++ +A
Sbjct: 280 VDQIEYLEKEFERTHYPDVFSRERLSSKTNLPEARIQVWFSNRRAKWRREEKQRSQAASE 339
Query: 176 QTSETV 181
TS V
Sbjct: 340 GTSVAV 345
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 39/58 (67%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
KEFERTHYPDVF+RERL+ K LPEARIQV NR + +K++ +A TS V
Sbjct: 288 KEFERTHYPDVFSRERLSSKTNLPEARIQVWFSNRRAKWRREEKQRSQAASEGTSVAV 345
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 128 RTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 181
+ + P++FA E L ++I PE VSSINRVLRNLAAQKE H Q S +
Sbjct: 143 KQNCPNIFAWEIRDKLLNERICTPENIPSVSSINRVLRNLAAQKEFSKKPHAQESSNI 200
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 231 RTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
+ + P++FA E L ++I PE VSSINRVLRNLAAQKE H Q S +
Sbjct: 143 KQNCPNIFAWEIRDKLLNERICTPENIPSVSSINRVLRNLAAQKEFSKKPHAQESSNI 200
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 19/20 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQ 358
QVWFSNRRAKWRREEK R+Q
Sbjct: 316 QVWFSNRRAKWRREEKQRSQ 335
>gi|395755881|ref|XP_002833676.2| PREDICTED: paired box protein Pax-6-like, partial [Pongo abelii]
Length = 226
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 66/79 (83%), Gaps = 2/79 (2%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFAR+R
Sbjct: 10 ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARQR 67
Query: 140 LADKIGLPEARIQVSSINR 158
LA KI LPEARIQV NR
Sbjct: 68 LAAKIDLPEARIQVWFSNR 86
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFAR+RLA KI LPEARIQV NR
Sbjct: 52 KEFERTHYPDVFARQRLAAKIDLPEARIQVWFSNR 86
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 80 QVWFSNRRAKWRREEKLRNQRR 101
>gi|210147371|ref|NP_001129718.1| uncharacterized protein LOC100192209 [Danio rerio]
gi|190336586|gb|AAI62065.1| Similar to Pax-family transcription factor 6.2 [Danio rerio]
gi|190336609|gb|AAI62456.1| Similar to Pax-family transcription factor 6.2 [Danio rerio]
Length = 270
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
+DSQ+ L+LKRKLQRNRTSFT EQID+LEKEFERTHYPDVFARERLA KI LPEARIQV
Sbjct: 56 DDSQLHLQLKRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAAKIDLPEARIQVW 115
Query: 155 SINR 158
NR
Sbjct: 116 FSNR 119
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 85 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 119
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 113 QVWFSNRRAKWRREEKLRNQRR 134
>gi|296062658|emb|CBL93955.1| paired box 6 transcript variant [Podarcis siculus]
Length = 173
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 59/69 (85%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
N +++QMRL+LKR+LQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEA
Sbjct: 4 NGEDSDEAQMRLQLKRQLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEA 63
Query: 150 RIQVSSINR 158
RIQV NR
Sbjct: 64 RIQVWFSNR 72
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 38 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 72
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGS 365
R AK + ++ QVWFSNRRAKWRREEKLRNQRR ++ +
Sbjct: 53 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNT 92
>gi|260792042|ref|XP_002591036.1| paired box protein 6 [Branchiostoma floridae]
gi|229276236|gb|EEN47047.1| paired box protein 6 [Branchiostoma floridae]
Length = 981
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
N +DE +Q RLRLKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEA
Sbjct: 732 NDDSDE-AQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEA 790
Query: 150 RIQVSSINR 158
RIQV NR
Sbjct: 791 RIQVWFSNR 799
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 765 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 799
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRN 357
R AK + ++ QVWFSNRRAKWRREEKLRN
Sbjct: 780 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 811
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 2 KVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYP----------GST 51
KVSSINRVLRNLA+ ++ + + +KLR+ NG AW
Sbjct: 411 KVSSINRVLRNLASGEKNTLQSLQSADPQMLEKLRLLNGN---AWPHPGPWPYPPSTAGA 467
Query: 52 PPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNS 91
PPP G V + D ++H +++ + S
Sbjct: 468 PPPQTNGNVTTKKEGEVLTVETLDMEQHTDGMELDLDSCS 507
>gi|313233507|emb|CBY09679.1| unnamed protein product [Oikopleura dioica]
Length = 410
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/161 (47%), Positives = 91/161 (56%), Gaps = 34/161 (21%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPP-PSPAHLA 60
VSSINRVLRN K +S PG +W P +T P A+ +
Sbjct: 150 VSSINRVLRNFQNDKMVGSSP------------------PGSLSWSPDTTANWPFAANSS 191
Query: 61 LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMR---LRLKRKLQRNRTSFTNE 117
+ TP +ST D ++ S++DED ++LKRKLQRNRTSFT +
Sbjct: 192 VDFG----TP-------SADSTKDTSASSISASDEDRVKEDPDIQLKRKLQRNRTSFTQQ 240
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QI+SLE EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 241 QIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 281
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 228 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 248 EFERTHYPDVFARERLATKIGLPEARIQVWFSNR 281
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP--- 395
QVWFSNRRAKWRREEK+RNQR ++ NS + T P S P +S +P
Sbjct: 275 QVWFSNRRAKWRREEKMRNQRPVTSAHSNSYYPSIKTEHSTGSSPISGYPAMASGIPNSA 334
Query: 396 ------LNPGGFNPSSMYSSIPQPAGMDSYNP--SCLQQAAREHHHHSSYSYMFHDSLHS 447
+NPG + S M+S +G +Y+P SC+ +A S+YS D L +
Sbjct: 335 SAVSDVVNPGAY--SGMHSMTQNSSG--AYDPSYSCMLNSA-----FSTYSGNQADLLQN 385
Query: 448 LQS 450
L +
Sbjct: 386 LMT 388
>gi|1352719|sp|P47237.1|PAX6_CHICK RecName: Full=Paired box protein Pax-6
gi|545839|gb|AAB30163.1| transcription factor [Gallus gallus]
Length = 216
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 55/61 (90%)
Query: 98 QMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSIN 157
QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV N
Sbjct: 1 QMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSN 60
Query: 158 R 158
R
Sbjct: 61 R 61
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 27 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 61
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGS 365
R AK + ++ QVWFSNRRAKWRREEKLRNQRR ++ +
Sbjct: 42 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNT 81
>gi|903948|gb|AAC47541.1| MAB-18 [Caenorhabditis elegans]
gi|1583407|prf||2120400A mab-18 gene
Length = 284
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 79/126 (62%), Gaps = 16/126 (12%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + +P + ++D+ R+RLKRKLQRNRTSFT QI+SLEKEFERTHYPDVFARERLA K
Sbjct: 23 DEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQK 82
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 203
I LPEARIQV NR A+ ++ N+ S D + NG TPT
Sbjct: 83 IQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------TPT 126
Query: 204 PSPAHL 209
P+P +
Sbjct: 127 PTPGSV 132
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S D
Sbjct: 63 KEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMD 117
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHL 312
+ NG TPTP+P +
Sbjct: 118 S-SLSNG----------TPTPTPGSV 132
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTT-----TSTTALDHVPPTSQSPPPSSR 393
QVWFSNRRAKWRREEK+RN+R T + +N T S T + P +R
Sbjct: 91 QVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNR 150
Query: 394 LPLNPGG------FNP--SSMYSSIPQPAGMDSYN 420
P N F P S MY+ + QPA MD Y+
Sbjct: 151 FPSNNSANLPTTNFVPQTSQMYAGLSQPA-MDPYS 184
>gi|383472210|gb|AFH36032.1| PAX 6, partial [Trachemys dorbigni]
Length = 198
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/80 (70%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 80 ESTSDINSEPNSSADED-SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARE 138
E + NS D D +QMRL+LKRKLQRNRTSFT EQI++LEKEFERTHY DVFARE
Sbjct: 6 EEVKNTNSISXXGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYXDVFARE 65
Query: 139 RLADKIGLPEARIQVSSINR 158
RLA KI LPEARIQV NR
Sbjct: 66 RLAAKIDLPEARIQVWFSNR 85
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 29/35 (82%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHY DVFARERLA KI LPEARIQV NR
Sbjct: 51 KEFERTHYXDVFARERLAAKIDLPEARIQVWFSNR 85
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGS 365
QVWFSNRRAKWR EEKLRNQRR ++ +
Sbjct: 79 QVWFSNRRAKWRGEEKLRNQRRQASNT 105
>gi|20278918|gb|AAM18642.1|AF384973_1 Pax6 [Lampetra fluviatilis]
Length = 135
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 85/135 (62%), Gaps = 24/135 (17%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-----PGWAWYPGSTPPPSPA 57
VSSINRVLRNLA++K+ + E VYDKLRM NGQ PG W G+ P PA
Sbjct: 18 VSSINRVLRNLASEKQPMGA------EGVYDKLRMLNGQQQQQQPGAGW--GARPGWYPA 69
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSAD--EDSQMRLRLKRKLQRNRTSFT 115
L PG P D H+ + D S NS++D ED+QM L+LKRKLQRNRTSFT
Sbjct: 70 AL-----PGQQGP---DGCASHDGSLD-TSLSNSASDDSEDAQMWLQLKRKLQRNRTSFT 120
Query: 116 NEQIDSLEKEFERTH 130
EQI++LEKEFERTH
Sbjct: 121 QEQIEALEKEFERTH 135
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 17/61 (27%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-------PGW----AWYPGST 201
VSSINRVLRNLA++K+ +E VYDKLRM NGQ GW WYP +
Sbjct: 18 VSSINRVLRNLASEKQPMG------AEGVYDKLRMLNGQQQQQQPGAGWGARPGWYPAAL 71
Query: 202 P 202
P
Sbjct: 72 P 72
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 17/61 (27%)
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-------PGW----AWYPGST 304
VSSINRVLRNLA++K+ +E VYDKLRM NGQ GW WYP +
Sbjct: 18 VSSINRVLRNLASEKQPMG------AEGVYDKLRMLNGQQQQQQPGAGWGARPGWYPAAL 71
Query: 305 P 305
P
Sbjct: 72 P 72
>gi|71987664|ref|NP_001024572.1| Protein VAB-3, isoform c [Caenorhabditis elegans]
gi|903952|gb|AAC47542.1| MAB-18 [Caenorhabditis elegans]
gi|14530407|emb|CAC42288.1| Protein VAB-3, isoform c [Caenorhabditis elegans]
gi|1583408|prf||2120400B mab-18 gene
Length = 296
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P + ++D+ R+RLKRKLQRNRTSFT QI+SLEKEFERTHYPDVFARERLA KI
Sbjct: 37 DQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQ 96
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPS 205
LPEARIQV NR A+ ++ N+ S D + NG TPTP+
Sbjct: 97 LPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------TPTPT 140
Query: 206 PAHL 209
P +
Sbjct: 141 PGSV 144
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S D
Sbjct: 75 KEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMD 129
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHL 312
+ NG TPTP+P +
Sbjct: 130 S-SLSNG----------TPTPTPGSV 144
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTT-----TSTTALDHVPPTSQSPPPSSR 393
QVWFSNRRAKWRREEK+RN+R T + +N T S T + P +R
Sbjct: 103 QVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNR 162
Query: 394 LPLNPGG------FNP--SSMYSSIPQPAGMDSYN 420
P N F P S MY+ + QPA MD Y+
Sbjct: 163 FPSNNSANLPTTNFVPQTSQMYAGLSQPA-MDPYS 196
>gi|268578285|ref|XP_002644125.1| C. briggsae CBR-VAB-3 protein [Caenorhabditis briggsae]
Length = 301
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 59/73 (80%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P ++D+ R+RLKRKLQRNRTSFT QI+SLEKEFERTHYPDVFARERLA KI
Sbjct: 38 DQKPQIEQEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQ 97
Query: 146 LPEARIQVSSINR 158
LPEARIQV NR
Sbjct: 98 LPEARIQVWFSNR 110
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 76 KEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR 110
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 72/146 (49%), Gaps = 28/146 (19%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN---------TTTSTTALDHVPPTSQSPP 389
QVWFSNRRAKWRREEK+R++R T +S+N T + + + + +P
Sbjct: 104 QVWFSNRRAKWRREEKMRSKRSCGTMDSSSSNGPPTPKPQGLVTGSNMSNSIGSPASTP- 162
Query: 390 PSSRLPLNPGGFNPSSMYSSIPQPAGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQ 449
+R P N P++ + +P PA M YN L Q A + Y++ F ++ S+
Sbjct: 163 --NRFPSNNSANLPTTNF--VPPPAQM--YN--GLSQQAMD-----PYTFGFANAGLSM- 208
Query: 450 SAYQRAAPAAHSSPHPHPAHPGSSPY 475
+ YQ P A H H PG SPY
Sbjct: 209 APYQ---PPAEFQTH-HMFQPGRSPY 230
>gi|965067|gb|AAA82992.1| male abnormal-18, partial [Caenorhabditis elegans]
gi|1583406|prf||2120399B mab-18 gene
Length = 261
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P + ++D+ R+RLKRKLQRNRTSFT QI+SLEKEFERTHYPDVFARERLA KI
Sbjct: 2 DQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQ 61
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPS 205
LPEARIQV NR A+ ++ N+ S D + NG TPTP+
Sbjct: 62 LPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------TPTPT 105
Query: 206 PAHL 209
P +
Sbjct: 106 PGSV 109
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S D
Sbjct: 40 KEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMD 94
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHL 312
+ NG TPTP+P +
Sbjct: 95 S-SLSNG----------TPTPTPGSV 109
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTT-----TSTTALDHVPPTSQSPPPSSR 393
QVWFSNRRAKWRREEK+RN+R T + +N T S T + P +R
Sbjct: 68 QVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNR 127
Query: 394 LPLNPGG------FNP--SSMYSSIPQPAGMDSY 419
P N F P S MY+ + QPA MD Y
Sbjct: 128 FPSNNSANLPTTNFVPQTSQMYAGLSQPA-MDPY 160
>gi|16508152|gb|AAL18165.1| paired box transcription factor Pax6 [Ctenophorus ornatus]
Length = 99
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 67/108 (62%), Gaps = 13/108 (12%)
Query: 45 AWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLK 104
WYPG++ P P P G E+T+ I+S N + M+ LK
Sbjct: 5 GWYPGTSVPGQPTQDGCPQQEGG-----------GENTNSISS--NGEDSTQTPMKSSLK 51
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
RKL RNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 52 RKLHRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 99
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/29 (93%), Positives = 27/29 (93%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQ 255
KEFERTHYPDVFARERLA KI LPEARIQ
Sbjct: 71 KEFERTHYPDVFARERLAAKIDLPEARIQ 99
>gi|71987657|ref|NP_001024571.1| Protein VAB-3, isoform b [Caenorhabditis elegans]
gi|14530406|emb|CAC42287.1| Protein VAB-3, isoform b [Caenorhabditis elegans]
Length = 269
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 78/124 (62%), Gaps = 16/124 (12%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P + ++D+ R+RLKRKLQRNRTSFT QI+SLEKEFERTHYPDVFARERLA KI
Sbjct: 10 DQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQ 69
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPS 205
LPEARIQV NR A+ ++ N+ S D + NG TPTP+
Sbjct: 70 LPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNG----------TPTPT 113
Query: 206 PAHL 209
P +
Sbjct: 114 PGSV 117
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S D
Sbjct: 48 KEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMD 102
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHL 312
+ NG TPTP+P +
Sbjct: 103 S-SLSNG----------TPTPTPGSV 117
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTT-----TSTTALDHVPPTSQSPPPSSR 393
QVWFSNRRAKWRREEK+RN+R T + +N T S T + P +R
Sbjct: 76 QVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMTNPIGSPASTPNR 135
Query: 394 LPLNPGG------FNP--SSMYSSIPQPAGMDSY 419
P N F P S MY+ + QPA MD Y
Sbjct: 136 FPSNNSANLPTTNFVPQTSQMYAGLSQPA-MDPY 168
>gi|313241707|emb|CBY33928.1| unnamed protein product [Oikopleura dioica]
Length = 433
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 89/162 (54%), Gaps = 29/162 (17%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPP-PSPAHLA 60
VSSINRVLRN K +S PG +W P +T P A+ +
Sbjct: 166 VSSINRVLRNFQNDKMVGSSP------------------PGSLSWSPDTTANWPFAANSS 207
Query: 61 LPHNPGSVTPISRDDAKEHESTSDI----NSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
+ TP S D K+ + D S + Q RL+LKRKLQRNRTSFT
Sbjct: 208 VDFG----TP-SADSTKDIQVNFDFVILYFFLGFISLKQYFQARLQLKRKLQRNRTSFTQ 262
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+QI+SLE EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 263 QQIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 304
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 228 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 271 EFERTHYPDVFARERLATKIGLPEARIQVWFSNR 304
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP--- 395
QVWFSNRRAKWRREEK+RNQR ++ NS + T P S P +S +P
Sbjct: 298 QVWFSNRRAKWRREEKMRNQRPATSAHSNSYYPSIKTEHSTGSSPISGYPAMASGIPNSA 357
Query: 396 ------LNPGGFNPSSMYSSIPQPAGMDSYNP--SCLQQAAREHHHHSSYSYMFHDSLHS 447
+NP + S M+S +G +Y+P SC+ +A S+YS D L +
Sbjct: 358 SAVSDVVNPAAY--SGMHSMTQNSSG--AYDPSYSCMLNSA-----FSTYSGNQADLLQN 408
Query: 448 LQS 450
L +
Sbjct: 409 LMT 411
>gi|313240077|emb|CBY32432.1| unnamed protein product [Oikopleura dioica]
Length = 433
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 89/168 (52%), Gaps = 41/168 (24%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPP-PSPAHLA 60
VSSINRVLRN K +S PG +W P +T P A+ +
Sbjct: 166 VSSINRVLRNFQNDKMVGSSP------------------PGSLSWSPDTTANWPFAANSS 207
Query: 61 LPHNPGSVTPISRDDAKEHESTSDINSEPNS----------SADEDSQMRLRLKRKLQRN 110
+ TP +ST DI N S + Q RL+LKRKLQRN
Sbjct: 208 VDFG----TP-------SADSTKDIQVNFNFVIMYFFLGFISLTQYFQARLQLKRKLQRN 256
Query: 111 RTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RTSFT +QI+SLE EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 257 RTSFTQQQIESLESEFERTHYPDVFARERLATKIGLPEARIQVWFSNR 304
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 30/34 (88%)
Query: 228 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
EFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 271 EFERTHYPDVFARERLATKIGLPEARIQVWFSNR 304
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP--- 395
QVWFSNRRAKWRREEK+RNQR ++ N + T P S P +S +P
Sbjct: 298 QVWFSNRRAKWRREEKMRNQRPATSAHSNGYYPSIKTEHSTGSSPISGYPAMASGIPNSA 357
Query: 396 ------LNPGGFNPSSMYSSIPQPAGMDSYNP--SCLQQAAREHHHHSSYSYMFHDSLHS 447
+NPG + S M+S +G +Y+P SC+ +A S+YS D L +
Sbjct: 358 SAVSDVVNPGAY--SGMHSMTQNSSG--AYDPSYSCMLNSA-----FSTYSGNQADLLQN 408
Query: 448 LQS 450
L +
Sbjct: 409 LMT 411
>gi|18307889|gb|AAL67742.1|AF457141_1 Pax6 paired-less isoform [Mus musculus]
gi|18032022|gb|AAL40860.1| Pax6 paired-less isoform [Mus musculus]
gi|115501673|gb|ABI98884.1| paired box 6 transcript variant 39 [Columba livia]
gi|148695800|gb|EDL27747.1| paired box gene 6, isoform CRA_c [Mus musculus]
gi|149022828|gb|EDL79722.1| paired box gene 6, isoform CRA_b [Rattus norvegicus]
Length = 221
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%)
Query: 99 MRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
MRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 1 MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 60
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 26 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 60
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGS 365
R AK + ++ QVWFSNRRAKWRREEKLRNQRR ++ +
Sbjct: 41 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNT 80
>gi|115501675|gb|ABI98885.1| paired box 6 transcript variant 40 [Columba livia]
Length = 215
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 54/60 (90%)
Query: 99 MRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
MRL+LKRKLQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 1 MRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 60
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 26 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 60
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 326 RDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGSTGS 365
R AK + ++ QVWFSNRRAKWRREEKLRNQRR ++ +
Sbjct: 41 RLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNT 80
>gi|126702026|gb|ABN09915.2| paired box 6A transcription factor [Helobdella sp. MS-2000]
Length = 933
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
+ +D + Q+R+RLKRKLQRNRTSF+ +QIDSLE+EF++THYPDVFARERLA K+ LPEAR
Sbjct: 372 TGSDVEKQVRMRLKRKLQRNRTSFSTQQIDSLEREFDKTHYPDVFARERLAQKLELPEAR 431
Query: 151 IQVSSINR 158
IQV NR
Sbjct: 432 IQVWFSNR 439
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+EF++THYPDVFARERLA K+ LPEARIQV NR
Sbjct: 405 REFDKTHYPDVFARERLAQKLELPEARIQVWFSNR 439
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/18 (94%), Positives = 17/18 (94%)
Query: 339 QVWFSNRRAKWRREEKLR 356
QVWFSNRRAKWRREEK R
Sbjct: 433 QVWFSNRRAKWRREEKFR 450
>gi|57283151|emb|CAE30301.1| Pax6.1 protein [Glomeris marginata]
Length = 235
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 88/153 (57%), Gaps = 37/153 (24%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW----AWYPGST------P 52
VSSINRVLRNLAAQKEQQ A+ Q +TVYDKLRM NGQ GW +WYP S+ P
Sbjct: 87 VSSINRVLRNLAAQKEQQ-QANGQ--DTVYDKLRMLNGQ-GWPRPNSWYPTSSSCGPFGP 142
Query: 53 PPSPAHLALPHNPG------------------SVTPISRDDA-----KEHESTSDINSEP 89
P+PA S P+ ++ KE + TSD ++
Sbjct: 143 LPNPASAVAAAAAAAAVAAAAANVNASANVNTSTAPVVTENGHSHSKKEPDVTSDESNSG 202
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
+ D+DSQ RLRLKRKLQRNRTSFTNEQI+SL
Sbjct: 203 DGGTDDDSQARLRLKRKLQRNRTSFTNEQIESL 235
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 18/93 (19%)
Query: 128 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
+ P +FA R+RL +D + + VSSINRVLRNLAAQKEQQ A+ Q +TVYD
Sbjct: 58 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLAAQKEQQ-QANGQ--DTVYD 114
Query: 184 KLRMFNGQPGW----AWYPGST------PTPSP 206
KLRM NGQ GW +WYP S+ P P+P
Sbjct: 115 KLRMLNGQ-GWPRPNSWYPTSSSCGPFGPLPNP 146
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 18/93 (19%)
Query: 231 RTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ P +FA R+RL +D + + VSSINRVLRNLAAQKEQQ A+ Q +TVYD
Sbjct: 58 KRECPSIFAWEIRDRLLSDGVCTNDNIPSVSSINRVLRNLAAQKEQQ-QANGQ--DTVYD 114
Query: 287 KLRMFNGQPGW----AWYPGST------PTPSP 309
KLRM NGQ GW +WYP S+ P P+P
Sbjct: 115 KLRMLNGQ-GWPRPNSWYPTSSSCGPFGPLPNP 146
>gi|222530732|emb|CAU83353.1| Pax6 protein [Parasteatoda tepidariorum]
Length = 210
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 80/129 (62%), Gaps = 15/129 (11%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTP--PPSP 56
VSSINRVLRNLAAQKEQ A Q + VYDKLRM NGQ GW WYPG T +P
Sbjct: 88 VSSINRVLRNLAAQKEQ---AQVQAQDAVYDKLRMLNGQ-GWPRPNPWYPGGTTFGGIAP 143
Query: 57 AHLALPHNPGSVTPISRDDAKEHESTSDINSEPN---SSADEDSQMRLRLKRKLQRNRTS 113
+++A P TP+ + E + S P+ S +EDS RLRLKRKLQRNRTS
Sbjct: 144 SYIAPVTTPA--TPLENGLNPKREGSVTEASTPSDQSGSGEEDSAARLRLKRKLQRNRTS 201
Query: 114 FTNEQIDSL 122
FT EQI++L
Sbjct: 202 FTPEQIEAL 210
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 50/84 (59%), Gaps = 13/84 (15%)
Query: 126 FERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 181
F+R P +FA R+RL + + VSSINRVLRNLAAQKEQ A Q + V
Sbjct: 58 FKR-ECPSIFAWEIRDRLLSEGACTNDSVPSVSSINRVLRNLAAQKEQ---AQVQAQDAV 113
Query: 182 YDKLRMFNGQPGW----AWYPGST 201
YDKLRM NGQ GW WYPG T
Sbjct: 114 YDKLRMLNGQ-GWPRPNPWYPGGT 136
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 50/84 (59%), Gaps = 13/84 (15%)
Query: 229 FERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETV 284
F+R P +FA R+RL + + VSSINRVLRNLAAQKEQ A Q + V
Sbjct: 58 FKR-ECPSIFAWEIRDRLLSEGACTNDSVPSVSSINRVLRNLAAQKEQ---AQVQAQDAV 113
Query: 285 YDKLRMFNGQPGW----AWYPGST 304
YDKLRM NGQ GW WYPG T
Sbjct: 114 YDKLRMLNGQ-GWPRPNPWYPGGT 136
>gi|74096055|ref|NP_001027641.1| homeobox transcription factor Pax6 [Ciona intestinalis]
gi|18700477|dbj|BAB85207.1| Pax6 [Ciona intestinalis]
Length = 497
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 88/161 (54%), Gaps = 25/161 (15%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR--MFNGQPGWAWYPGSTPPPSPAHLA 60
VSSINRVLRNL + +QT + R Q G W +
Sbjct: 142 VSSINRVLRNL--------NGDHQTGGFIETNGRDPKSGSQLGLEW-------SLTCNGW 186
Query: 61 LPHNPGSVTPISRDDA---KEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
LP I+ + K ES + SE + D S+ RL+LKRKLQRNRTSFT
Sbjct: 187 LPQQTMCQEQIAAEGLMGLKGKESV--VESE---AKDGSSEARLQLKRKLQRNRTSFTQI 241
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
Q+++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 242 QVEALEKEFERTHYPDVFARERLATKIDLPEARIQVWFSNR 282
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKE------------------- 168
P +FA R+RL ++ I VSSINRVLRNL +
Sbjct: 117 PSIFAWEIRDRLLNEGICNNDNIPSVSSINRVLRNLNGDHQTGGFIETNGRDPKSGSQLG 176
Query: 169 ------------QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
QQ Q + L+ GS+ L N
Sbjct: 177 LEWSLTCNGWLPQQTMCQEQIAAEGLMGLKGKESVVESEAKDGSSEARLQLKRKLQRNRT 236
Query: 217 SVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
S T I + KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 237 SFTQIQVEALEKEFERTHYPDVFARERLATKIDLPEARIQVWFSNR 282
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWFSNRRAKWRREEK+R+QR
Sbjct: 276 QVWFSNRRAKWRREEKIRSQR 296
>gi|70570887|dbj|BAE06639.1| transcription factor protein [Ciona intestinalis]
Length = 496
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 88/159 (55%), Gaps = 21/159 (13%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNL + Q +T+ + Q G W + LP
Sbjct: 142 VSSINRVLRNLNG--DHQTGGFIETTGRGPES----GSQLGLEW-------SLTCNGWLP 188
Query: 63 HNPGSVTPISRDDA---KEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQI 119
I+ + K ES + SE + D S+ RL+LKRKLQRNRTSFT Q+
Sbjct: 189 QQTMCQEQIAAEGLMGLKGKESV--VESE---AKDGSSEARLQLKRKLQRNRTSFTQIQV 243
Query: 120 DSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 244 EALEKEFERTHYPDVFARERLATKIDLPEARIQVWFSNR 282
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 68/166 (40%), Gaps = 36/166 (21%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKE------------------- 168
P +FA R+RL ++ I VSSINRVLRNL +
Sbjct: 117 PSIFAWEIRDRLLNEGICNNDNIPSVSSINRVLRNLNGDHQTGGFIETTGRGPESGSQLG 176
Query: 169 ------------QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
QQ Q + L+ GS+ L N
Sbjct: 177 LEWSLTCNGWLPQQTMCQEQIAAEGLMGLKGKESVVESEAKDGSSEARLQLKRKLQRNRT 236
Query: 217 SVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
S T I + KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 237 SFTQIQVEALEKEFERTHYPDVFARERLATKIDLPEARIQVWFSNR 282
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWFSNRRAKWRREEK+R+QR
Sbjct: 276 QVWFSNRRAKWRREEKIRSQR 296
>gi|28268517|emb|CAD45626.1| paired box protein [Danio rerio]
Length = 108
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 24/127 (18%)
Query: 4 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAH 58
SSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++ P P
Sbjct: 1 SSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQ 54
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
+ G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT EQ
Sbjct: 55 DGCQQSDGG-----------GENTNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQEQ 101
Query: 119 IDSLEKE 125
I++LEKE
Sbjct: 102 IEALEKE 108
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 154 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAH 208
SSINRVLRNLA++K+Q ++ +Y+KLRM NGQ G W WYPG++ P
Sbjct: 1 SSINRVLRNLASEKQQMG------ADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQ 54
Query: 209 LALPHNPGS 217
+ G
Sbjct: 55 DGCQQSDGG 63
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 257 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGSTPTPSPAH 311
SSINRVLRNLA++K+Q ++ +Y+KLRM NGQ G W WYPG++ P
Sbjct: 1 SSINRVLRNLASEKQQMG------ADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNQ 54
Query: 312 LALPHNPGS 320
+ G
Sbjct: 55 DGCQQSDGG 63
>gi|28268519|emb|CAD45627.1| paired box protein [Danio rerio]
Length = 108
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 79/127 (62%), Gaps = 24/127 (18%)
Query: 4 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPAH 58
SSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 1 SSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPNQ 54
Query: 59 LALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQ 118
+D+ E+ T+ I+S N +++QMRL+LKRKLQRNRTSFT EQ
Sbjct: 55 DGCQQ---------QDNGGEN--TNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQEQ 101
Query: 119 IDSLEKE 125
I++LEKE
Sbjct: 102 IEALEKE 108
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 11/53 (20%)
Query: 154 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 201
SSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 1 SSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQSGTWGTRPGWYPGTS 47
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 11/53 (20%)
Query: 257 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
SSINRVLRNLA++K+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 1 SSINRVLRNLASEKQQMG------ADGMYDKLRMLNGQSGTWGTRPGWYPGTS 47
>gi|431915679|gb|ELK16012.1| Paired box protein Pax-6 [Pteropus alecto]
Length = 441
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 77/127 (60%), Gaps = 24/127 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPPPSPA 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++ P P
Sbjct: 217 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 270
Query: 58 HLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
G E+T+ I+S N +++QMRL+LKRKLQRNRTSFT E
Sbjct: 271 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 317
Query: 118 QIDSLEK 124
QI++LEK
Sbjct: 318 QIEALEK 324
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 173 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 231
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 304
+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 232 QQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 264
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 16/106 (15%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVL 160
R + ++ ++ S +++R P +FA R+RL + I VSSINRVL
Sbjct: 166 RAIGGSKPRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVL 224
Query: 161 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-W----AWYPGST 201
RNLA++K+Q ++ +YDKLRM NGQ G W WYPG++
Sbjct: 225 RNLASEKQQMG------ADGMYDKLRMLNGQTGSWGTRPGWYPGTS 264
>gi|347963087|ref|XP_566364.4| AGAP000063-PA [Anopheles gambiae str. PEST]
gi|333467366|gb|EAL41300.4| AGAP000063-PA [Anopheles gambiae str. PEST]
Length = 564
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
D D++ RL LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVF+RERL+ K LPEARIQ
Sbjct: 268 VDNDTE-RLSLKRKLQRNRTSFTVDQIEFLEKEFERTHYPDVFSRERLSSKTNLPEARIQ 326
Query: 153 VSSI 156
VS I
Sbjct: 327 VSYI 330
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/33 (81%), Positives = 29/33 (87%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
KEFERTHYPDVF+RERL+ K LPEARIQVS I
Sbjct: 298 KEFERTHYPDVFSRERLSSKTNLPEARIQVSYI 330
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 333 VQQSARQVWFSNRRAKWRREEKLRNQ 358
+Q S +VWFSNRRAKWRREEK R+Q
Sbjct: 325 IQVSYIEVWFSNRRAKWRREEKQRSQ 350
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQK 270
P TP + +F + + P++FA E L ++I PE VSSINRVLRNLAAQK
Sbjct: 79 PRVATPEVVNKISQF-KNNCPNIFAWEIRDKLLNERICTPENIPSVSSINRVLRNLAAQK 137
Query: 271 E 271
E
Sbjct: 138 E 138
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 128 RTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKE 168
+ + P++FA E L ++I PE VSSINRVLRNLAAQKE
Sbjct: 94 KNNCPNIFAWEIRDKLLNERICTPENIPSVSSINRVLRNLAAQKE 138
>gi|157128224|ref|XP_001661352.1| paired box protein pax-6 [Aedes aegypti]
gi|108882239|gb|EAT46464.1| AAEL002321-PA [Aedes aegypti]
Length = 537
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 94 DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
D DS+ RL LKRKLQRNRTSFT +QI+ LEKEFERTHYPDVF+RERL+ K LPEARIQV
Sbjct: 235 DSDSE-RLSLKRKLQRNRTSFTVDQIEYLEKEFERTHYPDVFSRERLSSKTNLPEARIQV 293
Query: 154 SSINR 158
NR
Sbjct: 294 WFSNR 298
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVF+RERL+ K LPEARIQV NR
Sbjct: 264 KEFERTHYPDVFSRERLSSKTNLPEARIQVWFSNR 298
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 19/20 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQ 358
QVWFSNRRAKWRREEK R+Q
Sbjct: 292 QVWFSNRRAKWRREEKQRSQ 311
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 128 RTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQ 176
+ + P++FA E L ++I PE VSSINRVLRNLAAQKE H Q
Sbjct: 94 KQNCPNIFAWEIRDKLLNERICTPENIPSVSSINRVLRNLAAQKEFSKKPHAQ 146
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 231 RTHYPDVFARE----RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQ 279
+ + P++FA E L ++I PE VSSINRVLRNLAAQKE H Q
Sbjct: 94 KQNCPNIFAWEIRDKLLNERICTPENIPSVSSINRVLRNLAAQKEFSKKPHAQ 146
>gi|440647289|dbj|BAM74251.1| Pax-6 variant form1 [Idiosepius paradoxus]
Length = 408
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 81/145 (55%), Gaps = 26/145 (17%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL + + I VSSINRVLRNLA + ++ T
Sbjct: 96 QFKR-ECPSIFAWEVRDRLLSEGVCTQDNIPSVSSINRVLRNLAGENQKVLG----QGTT 150
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSP-----AHLALPHNPGSVT----PISRDDAKEFER 231
+YDKL + NGQ AW P P+P A +A P S T P + KEFER
Sbjct: 151 MYDKLGLLNGQ---AW-----PRPNPWYAPNASMAGLSAPSSYTQPNPPSTVAGKKEFER 202
Query: 232 THYPDVFARERLADKIGLPEARIQV 256
THYPDVF RERLA KI LPEARIQV
Sbjct: 203 THYPDVFVRERLAQKIDLPEARIQV 227
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 68/151 (45%), Gaps = 50/151 (33%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA + ++ T+YDKL + NGQ AW P P+P +
Sbjct: 127 VSSINRVLRNLAGENQKVLG----QGTTMYDKLGLLNGQ---AW-----PRPNPWYAPNA 174
Query: 63 HNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
G P S ++PN + +
Sbjct: 175 SMAGLSAPSSY-------------TQPNPPSTVAGK------------------------ 197
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQV 153
KEFERTHYPDVF RERLA KI LPEARIQV
Sbjct: 198 -KEFERTHYPDVFVRERLAQKIDLPEARIQV 227
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 136/331 (41%), Gaps = 102/331 (30%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL + + I VSSINRVLRNLA +
Sbjct: 83 PRVATPEVVQKIAQFKR-ECPSIFAWEVRDRLLSEGVCTQDNIPSVSSINRVLRNLAGEN 141
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPTPSPAHLALPH-----NPGSV 321
++ T+YDKL + NGQ W WY P S A L+ P NP S
Sbjct: 142 QKVLG----QGTTMYDKLGLLNGQ-AWPRPNPWY---APNASMAGLSAPSSYTQPNPPST 193
Query: 322 TPISRDDAKG----------LVQQ----SAR-QVWFSNRRAKWRREEKLRNQRRGSTGSV 366
++ + L Q+ AR QVWFSNRRA+WRREE+LRNQRR
Sbjct: 194 VAGKKEFERTHYPDVFVRERLAQKIDLPEARIQVWFSNRRARWRREERLRNQRR------ 247
Query: 367 NSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQP------------- 413
+AN +T RLP+N P SMY +I QP
Sbjct: 248 EAANGST-------------------RLPINSS--FPHSMYPTINQPLASMAESYRDLKG 286
Query: 414 ----AGMDSY--------------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRA 455
G+ S NP+CLQ A SSYS M D + Y
Sbjct: 287 WDVAGGLGSMPTVPNYSLSNNITGNPACLQSNA------SSYSCMLPDYVSGTARRYDPL 340
Query: 456 APAAHSSPHPHPAHPGSSPYGTSNSVNGPPT 486
+ + +S +PA G + T +S NG T
Sbjct: 341 SLSNYSRSSCNPAA-GMQSHMTPHSTNGAST 370
>gi|440647291|dbj|BAM74252.1| Pax-6 variant form2 [Idiosepius paradoxus]
Length = 448
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 81/143 (56%), Gaps = 22/143 (15%)
Query: 125 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSET 180
+F+R P +FA R+RL + + I VSSINRVLRNLA + ++ T
Sbjct: 96 QFKR-ECPSIFAWEVRDRLLSEGVCTQDNIPSVSSINRVLRNLAGENQKVLG----RGTT 150
Query: 181 VYDKLRMFNGQPGWA----WYPGSTPTP---SPAHLALPHNPGSVTPISRDDAKEFERTH 233
+YDKL + +GQ W WY + P +P+ P+ P +V KEFERTH
Sbjct: 151 MYDKLGLLHGQ-AWPRPNPWYAPNAPMAGLSAPSSYTQPNPPSTVA-----GKKEFERTH 204
Query: 234 YPDVFARERLADKIGLPEARIQV 256
YPDVFARERLA KI LPEARIQV
Sbjct: 205 YPDVFARERLAQKIDLPEARIQV 227
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 70/151 (46%), Gaps = 50/151 (33%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINRVLRNLA + ++ T+YDKL + +GQ AW P P+P + P
Sbjct: 127 VSSINRVLRNLAGENQKVLG----RGTTMYDKLGLLHGQ---AW-----PRPNPWY--AP 172
Query: 63 HNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
+ P + S P+S + + K++
Sbjct: 173 NAPMAGL-----------------SAPSSYTQPNPPSTVAGKKEF--------------- 200
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQV 153
ERTHYPDVFARERLA KI LPEARIQV
Sbjct: 201 ----ERTHYPDVFARERLAQKIDLPEARIQV 227
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 124/296 (41%), Gaps = 95/296 (32%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +F+R P +FA R+RL + + I VSSINRVLRNLA +
Sbjct: 83 PXVATPEVVQKIAQFKR-ECPSIFAWEVRDRLLSEGVCTQDNIPSVSSINRVLRNLAGEN 141
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWA----WYPGSTPTP---SPAHLALPHNPGSVTP 323
++ T+YDKL + +GQ W WY + P +P+ P+ P +V
Sbjct: 142 QKVLG----RGTTMYDKLGLLHGQ-AWPRPNPWYAPNAPMAGLSAPSSYTQPNPPSTVAG 196
Query: 324 ------------ISRDD-AKGLVQQSAR-QVWFSNRRAKWRREEKLRNQRRGSTGSVNSA 369
+R+ A+ + AR QVWFSNRRA+WRREE+LRNQRR +A
Sbjct: 197 KKEFERTHYPDVFARERLAQKIDLPEARIQVWFSNRRARWRREERLRNQRR------EAA 250
Query: 370 NTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQP---------------- 413
N +T RLP+N P SMY +I QP
Sbjct: 251 NGST-------------------RLPINSS--FPHSMYPTINQPLASMAESYRDLKRLGM 289
Query: 414 -AGMDSY--------------NPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQR 454
+G+ S NP+CLQ A SSYS M D L + R
Sbjct: 290 ASGLGSMPTVPNYSLSNNITGNPACLQSNA------SSYSCMLPDMLEWYKEGLTR 339
>gi|339241875|ref|XP_003376863.1| paired box protein Pax-6 [Trichinella spiralis]
gi|316974400|gb|EFV57892.1| paired box protein Pax-6 [Trichinella spiralis]
Length = 419
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 96/161 (59%), Gaps = 22/161 (13%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
TN+ +D + +++R P +FA R+RL + + I VSSINRVLRNLAAQKEQQ
Sbjct: 121 TNKVVDKIA-DYKR-ECPSIFAWEIRDRLLQENVCNQDNIPSVSSINRVLRNLAAQKEQQ 178
Query: 171 ASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTP-TPSPAHLALPHNPGS--------VTP 220
A+ + +YDKLRM +NG W + P + P P NP + VTP
Sbjct: 179 AA-----QQEIYDKLRMSWNGGHSWLYSPAAAAAIPQPNAHVTSMNPSAPNFFTNFAVTP 233
Query: 221 ISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
S + KEFERTHYPDVFARERLA +I LPEARIQV NR
Sbjct: 234 -SVESKKEFERTHYPDVFARERLAGRINLPEARIQVWFSNR 273
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 94/183 (51%), Gaps = 42/183 (22%)
Query: 224 DDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQ 279
D +++R P +FA R+RL + + I VSSINRVLRNLAAQKEQQA+
Sbjct: 126 DKIADYKR-ECPSIFAWEIRDRLLQENVCNQDNIPSVSSINRVLRNLAAQKEQQAA---- 180
Query: 280 TSETVYDKLRM-FNGQPGWAWYPGSTP-TPSPAHLALPHNPGS--------VTP------ 323
+ +YDKLRM +NG W + P + P P NP + VTP
Sbjct: 181 -QQEIYDKLRMSWNGGHSWLYSPAAAAAIPQPNAHVTSMNPSAPNFFTNFAVTPSVESKK 239
Query: 324 ----------ISRDDAKGLVQ--QSARQVWFSNRRAKWRREEKLRNQRRGSTGSVNSANT 371
+R+ G + ++ QVWFSNRRAKWRREEKLRNQ+R + NT
Sbjct: 240 EFERTHYPDVFARERLAGRINLPEARIQVWFSNRRAKWRREEKLRNQKR----VFDCGNT 295
Query: 372 TTS 374
TT+
Sbjct: 296 TTT 298
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 79/161 (49%), Gaps = 53/161 (32%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPP-PSPAHLA 60
VSSINRVLRNLAAQKEQQA+ + +YDKLRM +NG W + P + P P
Sbjct: 161 VSSINRVLRNLAAQKEQQAA-----QQEIYDKLRMSWNGGHSWLYSPAAAAAIPQPNAHV 215
Query: 61 LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQID 120
NP S PN FTN +
Sbjct: 216 TSMNP---------------------SAPN----------------------FFTNFAVT 232
Query: 121 -SLE--KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
S+E KEFERTHYPDVFARERLA +I LPEARIQV NR
Sbjct: 233 PSVESKKEFERTHYPDVFARERLAGRINLPEARIQVWFSNR 273
>gi|159163961|pdb|2CUE|A Chain A, Solution Structure Of The Homeobox Domain Of The Human
Paired Box Protein Pax-6
Length = 80
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 45/51 (88%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 8 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 58
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 24 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 58
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/24 (95%), Positives = 23/24 (95%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGS 362
QVWFSNRRAKWRREEKLRNQRR S
Sbjct: 52 QVWFSNRRAKWRREEKLRNQRRQS 75
>gi|403287533|ref|XP_003934998.1| PREDICTED: paired box protein Pax-7 [Saimiri boliviensis
boliviensis]
Length = 502
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + S T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYSTTTISQDGGSTVHR 325
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 234 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------N 279
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA 329
+L FN + P PT P LP + S T IS+D
Sbjct: 280 QLAAFNHLLPGGFPPTGMPTLPPYQ--LPDSTYSTTTISQDGG 320
>gi|332016410|gb|EGI57323.1| Paired box protein Pax-6 [Acromyrmex echinatior]
Length = 787
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 87/190 (45%), Gaps = 34/190 (17%)
Query: 106 KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR---- 161
K +RNRT+F+ EQ++ LEKEFER+HYP V RERLA K L EAR+QV NR +
Sbjct: 413 KFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRRH 472
Query: 162 ---NL-----------------------AAQKEQQASAHNQTSETVYDKLRMFNGQPGWA 195
NL +A KE Q + Y + F G
Sbjct: 473 QRMNLLKRSPPPPPPPPPQPQPQPQQPHSATKEIQDTFIELNIGVFYLGIGQFRDIKGVK 532
Query: 196 WYPGSTPTPSPAHLALP---HNPGSVTPISRDDAK-EFERTHYPDVFARERLADKIGLPE 251
G S P N + +P ++ + EFER+HYP V RERLA K L E
Sbjct: 533 LLDGDGDDGSLDGSEQPKFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSE 592
Query: 252 ARIQVSSINR 261
AR+QV NR
Sbjct: 593 ARVQVWFSNR 602
>gi|190608780|gb|ACE79721.1| paired-box transcription factor 3/7 [Branchiostoma lanceolatum]
Length = 297
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S+D DS+ L LKRK +R+RT+FT EQ+D LEK FERTHYPD++ RE LA + L E
Sbjct: 78 PGDSSDCDSEPDLPLKRKQRRSRTTFTPEQLDELEKAFERTHYPDIYTREELAQRTKLTE 137
Query: 149 ARIQVSSINRVLRNLAAQKEQQ 170
AR+QV +R R Q QQ
Sbjct: 138 ARVQVWFSSRRARWRKQQGAQQ 159
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR-------NLAAQKEQQASAHNQTSETVYDKL 185
D ++ + D+ +P VSSI+R+LR +L + E + S D +
Sbjct: 16 DRLLKDGMCDRSTVPS----VSSISRILRGKGHKISDLEMEGEDELSIDGDRKPHSIDGI 71
Query: 186 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA-KEFERTHYPDVFARERLA 244
PG + S P P + + TP D+ K FERTHYPD++ RE LA
Sbjct: 72 LGEKNGPGDSSDCDSEPD-LPLKRKQRRSRTTFTPEQLDELEKAFERTHYPDIYTREELA 130
Query: 245 DKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
+ L EAR+QV +R R Q QQ
Sbjct: 131 QRTKLTEARVQVWFSSRRARWRKQQGAQQ 159
>gi|395528443|ref|XP_003766339.1| PREDICTED: paired box protein Pax-7 [Sarcophilus harrisii]
Length = 637
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 319 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 368
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 369 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 414
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + S T IS+D R
Sbjct: 415 AFNHLLPGGFPPTGMPTIPPYQ--LPDSTYSSTTISQDGGSTVHR 457
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 93/225 (41%), Gaps = 37/225 (16%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 248 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 303
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + G G GS P S T + + +E
Sbjct: 304 ECDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 363
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A
Sbjct: 364 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-------- 410
Query: 285 YDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA 329
++L FN + P PT P LP + S T IS+D
Sbjct: 411 -NQLAAFNHLLPGGFPPTGMPTIPPYQ--LPDSTYSSTTISQDGG 452
>gi|4185914|emb|CAA09227.1| DtPax-6 protein [Girardia tigrina]
Length = 577
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 80 ESTSDINSEPNSSADED-SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARE 138
E SD NS+ S D S +L +K QR+RTSFTN+QI+ LEKEFERTHYPDVF+RE
Sbjct: 296 EKISDFNSDRESENDRRYSNTESKLSKKSQRSRTSFTNDQINLLEKEFERTHYPDVFSRE 355
Query: 139 RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
+L+ + + E RIQV NR A + ++ S N S V + M N +P
Sbjct: 356 KLSQNLKVAETRIQVWFSNR----RAKWRREEKSEENNMS-NVMARSEMSNMEP 404
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVF+RE+L+ + + E RIQV NR A + ++ S N S V
Sbjct: 341 KEFERTHYPDVFSREKLSQNLKVAETRIQVWFSNR----RAKWRREEKSEENNMS-NVMA 395
Query: 287 KLRMFNGQP 295
+ M N +P
Sbjct: 396 RSEMSNMEP 404
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 19/22 (86%)
Query: 333 VQQSARQVWFSNRRAKWRREEK 354
V ++ QVWFSNRRAKWRREEK
Sbjct: 363 VAETRIQVWFSNRRAKWRREEK 384
>gi|297666243|ref|XP_002811443.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pongo abelii]
Length = 505
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPAGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 35/225 (15%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-------- 278
Query: 285 YDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA 329
++L FN + P PT P LP + T IS+D
Sbjct: 279 -NQLAAFNHLLPGGFPPAGMPTLPPYQ--LPDSTYPTTTISQDGG 320
>gi|260831720|ref|XP_002610806.1| paired box protein [Branchiostoma floridae]
gi|229296175|gb|EEN66816.1| paired box protein [Branchiostoma floridae]
Length = 464
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S+D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L E
Sbjct: 171 PGDSSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTE 230
Query: 149 ARIQVSSINRVLRNLAAQKEQQ 170
AR+QV NR R Q QQ
Sbjct: 231 ARVQVWFSNRRARWRKQQGAQQ 252
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
K FERTHYPD++ RE LA + L EAR+QV NR R Q QQ
Sbjct: 206 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQQGAQQ 252
>gi|9621907|gb|AAF89581.1|AF165886_1 paired-box transcription factor [Branchiostoma floridae]
Length = 464
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S+D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L E
Sbjct: 171 PGDSSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTE 230
Query: 149 ARIQVSSINRVLRNLAAQKEQQ 170
AR+QV NR R Q QQ
Sbjct: 231 ARVQVWFSNRRARWRKQQGAQQ 252
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
K FERTHYPD++ RE LA + L EAR+QV NR R Q QQ
Sbjct: 206 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQQGAQQ 252
>gi|395731076|ref|XP_003775838.1| PREDICTED: paired box protein Pax-7 isoform 2 [Pongo abelii]
Length = 518
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPAGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 170 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD++SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 199 SIDGILGDKCNRTDDASDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 248
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 249 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 297
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 246 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 297
>gi|432950125|ref|XP_004084398.1| PREDICTED: paired box protein Pax-7-like [Oryzias latipes]
Length = 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 191 SIDGILADKGSQADEVSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 240
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q SA N
Sbjct: 241 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGAHQLSAFN 289
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD++SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKCNRTDDASDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|399146688|gb|AFP25466.1| paired box 7 [Anas platyrhynchos]
Length = 503
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 186 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 281
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 282 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 324
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E
Sbjct: 113 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEEE 170
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + G G GS P S T + + +E
Sbjct: 171 DCDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 230
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 231 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|51869701|emb|CAH04387.1| paired box protein 7 [Salmo salar]
Length = 502
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 184 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 243
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 244 YTREELAQRTKLTEARVQVCFSNRRARWRKQAGANQLAAFN 284
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD++SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 191 SIDGILGDKCNRTDDGSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 240
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 241 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 289
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 238 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 289
>gi|397486749|ref|XP_003814486.1| PREDICTED: paired box protein Pax-7 [Pan paniscus]
Length = 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 78/148 (52%), Gaps = 16/148 (10%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + P+ +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 194 DKGNRPDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 253
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 203
L EAR+QV NR A+ +QA A ++L FN + P PT
Sbjct: 254 TKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLLPGGFPPTGMPT 299
Query: 204 PSPAHLALPHNPGSVTPISRDDAKEFER 231
P LP + T IS+D R
Sbjct: 300 LPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRPDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|83940796|gb|ABC48797.1| PAX7 transcriptional factor isoform B [Homo sapiens]
Length = 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD++SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 188 SIDGILGDKCNRTDDGSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 237
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 238 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 286
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 286
>gi|449275903|gb|EMC84639.1| Paired box protein Pax-7 [Columba livia]
Length = 524
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEEE 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + G G GS P S T + + +E
Sbjct: 170 DCDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD++SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKCNRTDDGSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|395821127|ref|XP_003783899.1| PREDICTED: paired box protein Pax-7 [Otolemur garnettii]
Length = 505
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR + +
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEDD 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|296206868|ref|XP_002750384.1| PREDICTED: paired box protein Pax-7 [Callithrix jacchus]
Length = 502
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 234 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|119615260|gb|EAW94854.1| paired box gene 7, isoform CRA_b [Homo sapiens]
Length = 504
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 186 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 281
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 282 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 324
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 113 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 170
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 171 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 230
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 231 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|207029223|ref|NP_001128726.1| paired box protein Pax-7 isoform 3 [Homo sapiens]
gi|114554356|ref|XP_001157066.1| PREDICTED: paired box protein Pax-7 isoform 1 [Pan troglodytes]
gi|426328069|ref|XP_004024825.1| PREDICTED: paired box protein Pax-7 isoform 2 [Gorilla gorilla
gorilla]
gi|410341459|gb|JAA39676.1| paired box 7 [Pan troglodytes]
Length = 505
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|119888927|ref|XP_616352.3| PREDICTED: paired box protein Pax-7 isoform 1 [Bos taurus]
gi|297472329|ref|XP_002685784.1| PREDICTED: paired box protein Pax-7 [Bos taurus]
gi|296490095|tpg|DAA32208.1| TPA: paired box 7 [Bos taurus]
Length = 505
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + G G GS P S T + + +E
Sbjct: 172 EADKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|108998495|ref|XP_001091106.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Macaca mulatta]
Length = 505
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|410966276|ref|XP_003989659.1| PREDICTED: paired box protein Pax-7 [Felis catus]
Length = 503
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 234 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|51869699|emb|CAH04386.1| paired box protein 7 [Salmo salar]
Length = 506
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + +SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDESSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|345794077|ref|XP_544533.3| PREDICTED: paired box protein Pax-7 [Canis lupus familiaris]
Length = 636
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 318 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 367
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 368 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 416
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 245 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGL--VSSISRVLRIKFGKKEEED 302
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + G G GS P S T + + +E
Sbjct: 303 EADKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 362
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 363 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 416
>gi|158289998|ref|XP_311581.3| AGAP010359-PA [Anopheles gambiae str. PEST]
gi|157018428|gb|EAA07188.4| AGAP010359-PA [Anopheles gambiae str. PEST]
Length = 172
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 49 GSTPPPSPAHLALPHNPGSVTPISRDD--AKEHESTSDINSEPNSSADEDSQMRLRLKRK 106
G T PPS + ++ G V P +DD K++ + + S+D +S+ + LKRK
Sbjct: 65 GVTDPPSVSSISRLLRGGGVDPGRKDDDGRKDYSIHGILGGRGSDSSDTESEPGILLKRK 124
Query: 107 LQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
+R+RT+FT+EQ+++LEK F RT YPDV+ RE LA L EARIQV
Sbjct: 125 QRRSRTTFTSEQLEALEKAFTRTQYPDVYTREELASTTNLTEARIQV 171
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 20/30 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
K F RT YPDV+ RE LA L EARIQV
Sbjct: 142 KAFTRTQYPDVYTREELASTTNLTEARIQV 171
>gi|7335704|gb|AAC15711.2| PaxC transcription factor [Acropora millepora]
Length = 464
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R K + S NSE N S ED+ ++ KRK++RNRT+F+ EQ++ LEKEFE++HYP
Sbjct: 291 RKAMKNNSGNSGYNSE-NDSGKEDNDVQANQKRKIRRNRTTFSPEQLEMLEKEFEKSHYP 349
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV RE LA KI + EAR+QV NR
Sbjct: 350 DVATREELASKIDMSEARVQVWFSNR 375
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE++HYPDV RE LA KI + EAR+QV NR
Sbjct: 341 KEFEKSHYPDVATREELASKIDMSEARVQVWFSNR 375
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 339 QVWFSNRRAKWRREEKLRN 357
QVWFSNRRAKWRR +K+ N
Sbjct: 369 QVWFSNRRAKWRRHQKINN 387
>gi|45384216|ref|NP_990396.1| paired box protein Pax-7 [Gallus gallus]
gi|2576239|dbj|BAA23005.1| PAX7 protein [Gallus gallus]
Length = 524
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEEE 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + G G GS P S T + + +E
Sbjct: 170 DCDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|332261023|ref|XP_003279579.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Nomascus leucogenys]
Length = 518
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|4505619|ref|NP_002575.1| paired box protein Pax-7 isoform 1 [Homo sapiens]
gi|8247951|sp|P23759.3|PAX7_HUMAN RecName: Full=Paired box protein Pax-7; AltName: Full=HuP1
gi|2570015|emb|CAA65522.1| PAX7 [Homo sapiens]
gi|2570021|emb|CAA65520.1| paired box containing transcription factor [Homo sapiens]
gi|119615261|gb|EAW94855.1| paired box gene 7, isoform CRA_c [Homo sapiens]
Length = 520
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSGL--VSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|344283453|ref|XP_003413486.1| PREDICTED: paired box protein Pax-7-like [Loxodonta africana]
Length = 505
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEEE 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|94404551|gb|ABF17938.1| Pax7 variant [Gallus gallus]
Length = 502
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEEE 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + G G GS P S T + + +E
Sbjct: 170 DCDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|348544801|ref|XP_003459869.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 526
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + +SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 204 SIDGILGDKGSRMDESSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 253
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 254 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 302
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 133 DVFARERLADKIGLPEARIQ-VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 191
D ++ + D+ +P VSSI+RVLR +KE + + + +G
Sbjct: 149 DKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKEDEDECDKKEEDGEKKTKHSIDGI 208
Query: 192 PG--WAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE----FERTHYPDVFARERLA 244
G + S+ S L L S T + + +E FERTHYPD++ RE LA
Sbjct: 209 LGDKGSRMDESSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELA 268
Query: 245 DKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ L EAR+QV NR R Q +A N
Sbjct: 269 QRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 302
>gi|119615262|gb|EAW94856.1| paired box gene 7, isoform CRA_d [Homo sapiens]
gi|410341457|gb|JAA39675.1| paired box 7 [Pan troglodytes]
gi|410341461|gb|JAA39677.1| paired box 7 [Pan troglodytes]
Length = 503
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 170 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|426328067|ref|XP_004024824.1| PREDICTED: paired box protein Pax-7 isoform 1 [Gorilla gorilla
gorilla]
Length = 518
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 170 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|114554358|ref|XP_513156.2| PREDICTED: paired box protein Pax-7 isoform 2 [Pan troglodytes]
Length = 518
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 170 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|355744963|gb|EHH49588.1| hypothetical protein EGM_00276, partial [Macaca fascicularis]
Length = 516
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 183 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 232
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 233 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 278
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 279 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 321
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 110 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 167
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 168 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 227
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 228 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 281
>gi|313240394|emb|CBY32733.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ ++ +E ++ + + +S DED ++ L LKRK +R+RT+F+ Q+D LEK FERTH
Sbjct: 155 VKKEPGQEGQADPGSDEKSENSEDED-EVNLPLKRKQRRSRTTFSANQLDELEKCFERTH 213
Query: 131 YPDVFARERLADKIGLPEARIQVSSINRVLR 161
YPD++ RE LA + GL EAR+QV NR R
Sbjct: 214 YPDIYTREELAGRTGLSEARVQVWFSNRRAR 244
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERTHYPD++ RE LA + GL EAR+QV NR R
Sbjct: 207 KCFERTHYPDIYTREELAGRTGLSEARVQVWFSNRRAR 244
>gi|388442|gb|AAB27471.1| paired box Pax-6 gene product [chickens, White Leghorn, embryo,
Peptide Partial, 61 aa, segment 2 of 2]
Length = 61
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/52 (84%), Positives = 46/52 (88%)
Query: 107 LQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
LQRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 1 LQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 52
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 18 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 52
>gi|7524359|ref|NP_039236.1| paired box protein Pax-7 isoform 2 [Homo sapiens]
gi|2570014|emb|CAA65521.1| PAX7 [Homo sapiens]
gi|111307751|gb|AAI21166.1| Paired box 7 [Homo sapiens]
gi|111307754|gb|AAI21167.1| Paired box 7 [Homo sapiens]
gi|119615259|gb|EAW94853.1| paired box gene 7, isoform CRA_a [Homo sapiens]
Length = 518
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 169
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 170 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 229
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 230 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|602343|emb|CAA84513.1| PAX7 paired box containing transcription factor [Homo sapiens]
Length = 467
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|444728104|gb|ELW68568.1| Paired box protein Pax-7 [Tupaia chinensis]
Length = 486
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 168 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 217
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 218 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 263
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 264 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 306
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 97 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 152
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + G G GS P S T + + +E
Sbjct: 153 EADKKEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 212
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 213 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 266
>gi|440892608|gb|ELR45722.1| Paired box protein Pax-7 [Bos grunniens mutus]
Length = 502
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 283 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 325
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + G G GS P S T + + +E
Sbjct: 172 EADKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|348544799|ref|XP_003459868.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 512
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + +SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGSRMDESSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 133 DVFARERLADKIGLPEARIQ-VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 191
D ++ + D+ +P VSSI+RVLR +KE + + + +G
Sbjct: 135 DKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKEDEDECDKKEEDGEKKTKHSIDGI 194
Query: 192 PG--WAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE----FERTHYPDVFARERLA 244
G + S+ S L L S T + + +E FERTHYPD++ RE LA
Sbjct: 195 LGDKGSRMDESSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELA 254
Query: 245 DKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ L EAR+QV NR R Q +A N
Sbjct: 255 QRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|56714087|gb|AAW24014.1| homeodomain protein Pax37b [Oikopleura dioica]
Length = 444
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ ++ +E ++ + + +S DED ++ L LKRK +R+RT+F+ Q+D LEK FERTH
Sbjct: 131 VKKEPGQEGQADPGSDEKSENSEDED-EVNLPLKRKQRRSRTTFSANQLDELEKCFERTH 189
Query: 131 YPDVFARERLADKIGLPEARIQVSSINRVLR 161
YPD++ RE LA + GL EAR+QV NR R
Sbjct: 190 YPDIYTREELAGRTGLSEARVQVWFSNRRAR 220
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERTHYPD++ RE LA + GL EAR+QV NR R
Sbjct: 183 KCFERTHYPDIYTREELAGRTGLSEARVQVWFSNRRAR 220
>gi|53125916|emb|CAG25520.1| paired box protein 7 [Salvelinus alpinus]
Length = 513
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 197 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 246
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 247 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 295
>gi|185133665|ref|NP_001117167.1| paired box protein 7 [Salmo salar]
gi|51869693|emb|CAH04383.1| paired box protein 7 [Salmo salar]
Length = 520
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 203 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 252
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 253 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 301
>gi|24158437|ref|NP_571407.1| paired box 7 isoform 2 [Danio rerio]
gi|2909771|gb|AAC41256.1| transcription factor PAX7D [Danio rerio]
Length = 487
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|310893853|gb|ADP37890.1| paired-domain transcription factor Pax3/7-A [Lethenteron
camtschaticum]
Length = 507
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E +SD++SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE
Sbjct: 195 EDSSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREE 244
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPG 199
LA + L EAR+QV NR A+ +QA A ++L FN + P
Sbjct: 245 LAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLIPGGFPPA 290
Query: 200 STPTPSPAHLALPHNPGSVTP 220
S P P L PGS P
Sbjct: 291 SMPGLPPYQLPEGPYPGSGIP 311
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 229 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------N 274
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 323
+L FN + P S P P L PGS P
Sbjct: 275 QLAAFNHLIPGGFPPASMPGLPPYQLPEGPYPGSGIP 311
>gi|351711816|gb|EHB14735.1| Paired box protein Pax-7 [Heterocephalus glaber]
Length = 457
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 169 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 218
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 219 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 264
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 265 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 307
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 216 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 267
>gi|313234194|emb|CBY10262.1| unnamed protein product [Oikopleura dioica]
Length = 444
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ ++ +E ++ + + +S DED ++ L LKRK +R+RT+F+ Q+D LEK FERTH
Sbjct: 131 VKKEPGQEGQADPGSDEKSENSEDED-EVNLPLKRKQRRSRTTFSANQLDELEKCFERTH 189
Query: 131 YPDVFARERLADKIGLPEARIQVSSINRVLR 161
YPD++ RE LA + GL EAR+QV NR R
Sbjct: 190 YPDIYTREELAGRTGLSEARVQVWFSNRRAR 220
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERTHYPD++ RE LA + GL EAR+QV NR R
Sbjct: 183 KCFERTHYPDIYTREELAGRTGLSEARVQVWFSNRRAR 220
>gi|381216182|gb|AFF61351.1| paired box protein 7 beta variant 1 [Oncorhynchus mykiss]
Length = 518
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 202 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 251
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 252 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 300
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR-------NLAAQKEQQASAHNQTSETVYDKL 185
D ++ + D+ +P VSSI+RVLR + ++ +T ++ L
Sbjct: 148 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGERKTKHSIDGIL 207
Query: 186 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARE 241
G G GS P S T + + +E FERTHYPD++ RE
Sbjct: 208 ----GDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 263
Query: 242 RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
LA + L EAR+QV NR R Q +A N
Sbjct: 264 ELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 300
>gi|53125994|emb|CAG25716.1| paired box protein 7 [Salvelinus alpinus]
Length = 514
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 198 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 296
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD++SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKCNRIDDGSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|348570856|ref|XP_003471212.1| PREDICTED: paired box protein Pax-7 [Cavia porcellus]
Length = 517
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 200 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 249
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 250 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 295
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 296 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 338
>gi|381216186|gb|AFF61353.1| paired box protein 7 beta variant 3 [Oncorhynchus mykiss]
Length = 514
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 198 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 296
>gi|301626098|ref|XP_002942235.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 502
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 186 SIDGILGDKGNRIDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 233 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|381216176|gb|AFF61348.1| paired box protein 7 alpha variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 198 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 296
>gi|41581183|emb|CAF02091.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 198 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 247
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 248 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 296
>gi|301626100|ref|XP_002942236.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 509
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 193 SIDGILGDKGNRIDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 242
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 243 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 291
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 73/178 (41%), Gaps = 21/178 (11%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLP----EARIQVSSINRVLR---NLA 164
+EK+ E + P +F+ R+RL D+ +P A + VSSI+RVLR
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSSVPSGEHRAGMGVSSISRVLRIKFGKK 173
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 224
+ + + + G G GS P S T + +
Sbjct: 174 EEDDDCDKKEEDGEKKAKHSIDGILGDKGNRIDEGSDVESEPDLPLKRKQRRSRTTFTAE 233
Query: 225 DAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+E FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 234 QLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 291
>gi|301782923|ref|XP_002926876.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-7-like
[Ailuropoda melanoleuca]
Length = 505
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 114 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPSG--LVSSISRVLRIKFGKKEEED 171
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + + + G G GS P S T + + +E
Sbjct: 172 EADKKEDDSEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 231
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|15625548|gb|AAL04156.1|AF411465_1 transcription factor Pax7 [Petromyzon marinus]
Length = 505
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 75/141 (53%), Gaps = 24/141 (17%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E +SD++SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE
Sbjct: 193 EDSSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREE 242
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPG 199
LA + L EAR+QV NR A+ +QA A ++L FN + P
Sbjct: 243 LAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLIPGGFPPA 288
Query: 200 STPTPSPAHLALPHNPGSVTP 220
S P P L PGS P
Sbjct: 289 SMPGLPPYQLPEGPYPGSGIP 309
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 227 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------N 272
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 323
+L FN + P S P P L PGS P
Sbjct: 273 QLAAFNHLIPGGFPPASMPGLPPYQLPEGPYPGSGIP 309
>gi|53125966|emb|CAG25714.1| paired box protein 7 [Salvelinus alpinus]
Length = 505
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 189 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 238
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 239 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 287
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR-------NLAAQKEQQASAHNQTSETVYDKL 185
D ++ + D+ +P VSSI+RVLR + ++ +T ++ L
Sbjct: 135 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGEKKTKHSIDGIL 194
Query: 186 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARE 241
G G GS P S T + + +E FERTHYPD++ RE
Sbjct: 195 ----GDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 250
Query: 242 RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
LA + L EAR+QV NR R Q +A N
Sbjct: 251 ELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 287
>gi|381216178|gb|AFF61349.1| paired box protein 7 alpha variant 3 [Oncorhynchus mykiss]
Length = 506
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|301626102|ref|XP_002942237.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Xenopus
(Silurana) tropicalis]
Length = 523
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRIDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 232 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|24158435|ref|NP_571400.1| paired box 7 isoform 1 [Danio rerio]
gi|2909769|gb|AAC41255.1| transcription factor PAX7C [Danio rerio]
gi|122891363|emb|CAM12909.1| paired box gene 7 [Danio rerio]
gi|190337573|gb|AAI63502.1| Paired box gene 7a [Danio rerio]
gi|190337587|gb|AAI63523.1| Paired box gene 7a [Danio rerio]
Length = 507
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|213626247|gb|AAI70120.1| LOC496378 protein [Xenopus laevis]
Length = 501
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 187 SIDGILGDKGNRIDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 234 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 285
>gi|381216188|gb|AFF61354.1| paired box protein 7 beta variant 4 [Oncorhynchus mykiss]
Length = 505
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 189 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 238
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 239 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 287
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR-------NLAAQKEQQASAHNQTSETVYDKL 185
D ++ + D+ +P VSSI+RVLR + ++ +T ++ L
Sbjct: 135 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGERKTKHSIDGIL 194
Query: 186 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARE 241
G G GS P S T + + +E FERTHYPD++ RE
Sbjct: 195 ----GDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 250
Query: 242 RLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
LA + L EAR+QV NR R Q +A N
Sbjct: 251 ELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 287
>gi|432098045|gb|ELK27932.1| Paired box protein Pax-7 [Myotis davidii]
Length = 592
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 310 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 359
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 360 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 408
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 357 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 408
>gi|34328055|ref|NP_035169.1| paired box protein Pax-7 [Mus musculus]
gi|52788256|sp|P47239.2|PAX7_MOUSE RecName: Full=Paired box protein Pax-7
gi|20522260|gb|AAG16663.3|AF254422_1 paired box transcription factor PAX7 [Mus musculus]
gi|162318458|gb|AAI56073.1| Paired box gene 7 [synthetic construct]
gi|162319578|gb|AAI56885.1| Paired box gene 7 [synthetic construct]
Length = 503
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 280
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 281 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 323
>gi|381216194|gb|AFF61357.1| paired box protein 7 beta variant 7 [Oncorhynchus mykiss]
Length = 501
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|148226698|ref|NP_001088995.1| paired box 7 [Xenopus laevis]
gi|52082690|gb|AAU25938.1| myogenic specification paired-box transcription factor Pax7
[Xenopus laevis]
Length = 500
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 186 SIDGILGDKGNRIDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 235
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 236 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 233 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|2136302|pir||A45452 transcription factor PAX3 - human (fragments)
Length = 326
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 42 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 91
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 92 DIYTREELAQRAKLTEARVQVWFSNRRAR 120
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 83 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 120
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + +D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 192 EKKTKHSIDGILGDKYDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 251
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 252 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 292
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 241 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 292
>gi|291399413|ref|XP_002716105.1| PREDICTED: paired box 7 [Oryctolagus cuniculus]
Length = 497
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 179 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 228
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 229 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 277
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR +++
Sbjct: 108 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 163
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + + G G GS P S T + + +E
Sbjct: 164 EADKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 223
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 224 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 277
>gi|119591196|gb|EAW70790.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_b [Homo
sapiens]
Length = 330
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 46 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 95
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 96 DIYTREELAQRAKLTEARVQVWFSNRRAR 124
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 87 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 124
>gi|41615361|gb|AAS09957.1| Pax7 transcription factor, partial [Ambystoma mexicanum]
Length = 375
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 188 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 237
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 238 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 286
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 286
>gi|86355081|dbj|BAE78775.1| paired box containing Pax7 [Pelodiscus sinensis]
Length = 436
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 119 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 168
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 169 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 217
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR---NLAAQKE 168
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E
Sbjct: 48 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEEE 103
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+ + G G GS P S T + + +E
Sbjct: 104 DCDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEE 163
Query: 229 ----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 164 LEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 217
>gi|148681370|gb|EDL13317.1| paired box gene 7 [Mus musculus]
Length = 498
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 180 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 229
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 230 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLA 275
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
FN + P PT P LP + T IS+D R
Sbjct: 276 AFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGGSTVHR 318
>gi|47228289|emb|CAG07684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 440
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + TSD++SEP L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 147 SIDGILGDRSSHSDDTSDVDSEPG----------LPLKRKQRRSRTTFTAEQLEELERAF 196
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERTHYPD++ RE +A + L EAR+QV NR R
Sbjct: 197 ERTHYPDIYTREEVAQRAKLTEARVQVWFSNRRAR 231
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE +A + L EAR+QV NR R
Sbjct: 194 RAFERTHYPDIYTREEVAQRAKLTEARVQVWFSNRRAR 231
>gi|24158480|ref|NP_571401.1| paired box 7 isoform 3 [Danio rerio]
gi|2909773|gb|AAC41257.1| transcription factor PAX7E [Danio rerio]
Length = 395
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 10/92 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 203 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 252
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINR 158
ERTHYPD++ RE LA + L EAR+QV NR
Sbjct: 253 ERTHYPDIYTREELAQRTKLTEARVQVWFSNR 284
>gi|51869697|emb|CAH04385.1| paired box protein 7 [Salmo salar]
Length = 514
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 196 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 255
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 256 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 296
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D ++ + D+ +P VSSI+RVLR +K+ + + + +G
Sbjct: 148 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGEKKTKHSIDGIL 207
Query: 193 GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARERLADKIG 248
G GS P S T + + +E FERTHYPD++ RE LA +
Sbjct: 208 G-DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTK 266
Query: 249 LPEARIQVSSINRVLRNLAAQKEQQASAHN 278
L EAR+QV NR R Q +A N
Sbjct: 267 LTEARVQVWFSNRRARWRKQAGANQLAAFN 296
>gi|190337567|gb|AAI63492.1| Paired box gene 7a [Danio rerio]
Length = 395
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 288
>gi|198423301|ref|XP_002122162.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 625
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 21/122 (17%)
Query: 67 SVTPISR-------DDAKEHESTSDIN---------SEPN--SSADEDSQMRLRLKRKLQ 108
SV+ ISR D E ES++ ++ EPN +D +S+ L LKRK +
Sbjct: 131 SVSSISRTLRAKGCDVENESESSARLDPGNRSSSSGGEPNEVGGSDSESEPDLPLKRKQR 190
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR---NLAA 165
R+RT+F+ EQ+D LE+ FERTHYPD++ RE LA + L EAR+QV NR R +AA
Sbjct: 191 RSRTTFSAEQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQMAA 250
Query: 166 QK 167
Q+
Sbjct: 251 QQ 252
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 38/174 (21%)
Query: 119 IDSLEKEFERTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR--NLAAQKE 168
+D+ +E+++ + P +F+ RERL D+ +P VSSI+R LR + E
Sbjct: 95 VDNKIEEYKKEN-PGIFSWEIRERLIKEGICDRSNVPS----VSSISRTLRAKGCDVENE 149
Query: 169 QQASAH----NQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISR 223
++SA N++S + G+P G + + S L L S T S
Sbjct: 150 SESSARLDPGNRSSSS--------GGEPNEV---GGSDSESEPDLPLKRKQRRSRTTFSA 198
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR---NLAAQK 270
+ E FERTHYPD++ RE LA + L EAR+QV NR R +AAQ+
Sbjct: 199 EQLDELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQMAAQQ 252
>gi|186680510|gb|ACC86106.1| paired box protein 7 [Sternopygus macrurus]
Length = 507
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGHRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKRAGANQLAAFN 288
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKRAGANQLAAFN 288
>gi|388240432|dbj|BAM15710.1| paired box gene 3 [Scyliorhinus torazame]
Length = 506
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 77/144 (53%), Gaps = 24/144 (16%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I + A + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 187 SIDGILANKANNSDEASDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 237 ERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------NQLL 282
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLA 210
FN + P + P SP L+
Sbjct: 283 AFNHLIPGGFPPTAMPALSPYQLS 306
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 234 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------N 279
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLA 313
+L FN + P + P SP L+
Sbjct: 280 QLLAFNHLIPGGFPPTAMPALSPYQLS 306
>gi|300795246|ref|NP_001178913.1| paired box protein Pax-7 [Rattus norvegicus]
Length = 503
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|51869695|emb|CAH04384.1| paired box protein 7 [Salmo salar]
Length = 515
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 197 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 256
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 257 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 297
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 6/151 (3%)
Query: 133 DVFARERLADKIGLPEARIQ-VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 191
D ++ + D+ +P VSSI+RVLR +K+ + N+ + +G
Sbjct: 148 DKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKDDDDDSDNKDEDGEKKTKHSIDGI 207
Query: 192 PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARERLADKI 247
G GS P S T + + +E FERTHYPD++ RE LA +
Sbjct: 208 LG-DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRT 266
Query: 248 GLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
L EAR+QV NR R Q +A N
Sbjct: 267 KLTEARVQVWFSNRRARWRKQAGANQLAAFN 297
>gi|381216174|gb|AFF61347.1| paired box protein 7 alpha variant 1 [Oncorhynchus mykiss]
Length = 515
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 197 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 256
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 257 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 297
>gi|149024435|gb|EDL80932.1| similar to paired box gene 7 isoform 1 (predicted) [Rattus
norvegicus]
Length = 492
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 174 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 223
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 224 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 272
>gi|53125929|emb|CAG25521.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 192 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 251
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 252 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 292
>gi|53125980|emb|CAG25715.1| paired box protein 7 [Salvelinus alpinus]
Length = 510
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 192 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 251
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 252 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 292
>gi|126338194|ref|XP_001365807.1| PREDICTED: paired box protein Pax-3 [Monodelphis domestica]
Length = 484
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 64/102 (62%), Gaps = 11/102 (10%)
Query: 71 ISRDDAKEHE-----STSDINSEPNSS------ADEDSQMRLRLKRKLQRNRTSFTNEQI 119
I R + +E+E S I SE S+ +D DS++ L LKRK +R+RT+FT EQ+
Sbjct: 172 IERKEVEENEKKTKHSIDGILSERASAPQSDEGSDIDSELDLPLKRKQRRSRTTFTAEQL 231
Query: 120 DSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ LE+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 232 EELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|345487147|ref|XP_001599246.2| PREDICTED: hypothetical protein LOC100114080 [Nasonia vitripennis]
Length = 988
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D E I + +S +D +S+ ++LKRK +R+RT+FT +Q+D LE+ FERT YPD
Sbjct: 613 DGKDERAVAGYIGGKASSGSDCESEPGIQLKRKQRRSRTTFTAQQLDELERAFERTQYPD 672
Query: 134 VFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 181
++ RE LA + L EARIQV NR R ++Q AS+ N S +V
Sbjct: 673 IYTREELAQRTKLTEARIQVWFSNRRAR----LRKQSASSTNYISSSV 716
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
+ FERT YPD++ RE LA + L EARIQV NR R ++Q AS+ N S +V
Sbjct: 663 RAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR----LRKQSASSTNYISSSV 716
>gi|53126022|emb|CAG25718.1| paired box protein 7 [Salvelinus alpinus]
Length = 501
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 183 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 242
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 243 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D ++ + D+ +P VSSI+RVLR +K+ + + + +G
Sbjct: 135 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGEKKTKHSIDGIL 194
Query: 193 GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARERLADKIG 248
G GS P S T + + +E FERTHYPD++ RE LA +
Sbjct: 195 G-DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTK 253
Query: 249 LPEARIQVSSINRVLRNLAAQKEQQASAHN 278
L EAR+QV NR R Q +A N
Sbjct: 254 LTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|53126008|emb|CAG25717.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 184 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 243
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 244 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|385251415|ref|NP_001245266.1| paired box 7 [Oncorhynchus mykiss]
gi|381216180|gb|AFF61350.1| paired box protein 7 alpha variant 4 [Oncorhynchus mykiss]
Length = 502
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 184 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 243
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 244 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|53125901|emb|CAG25526.1| paired box protein 7 [Salvelinus alpinus]
Length = 502
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 184 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 243
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 244 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|53125887|emb|CAG25525.1| paired box protein 7 [Salvelinus alpinus]
Length = 497
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 179 EKKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 238
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 239 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 279
>gi|399146686|gb|AFP25465.1| paired box 3 [Anas platyrhynchos]
Length = 482
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I + A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 187 SIDGILSERAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAF 236
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 237 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 271
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 234 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 271
>gi|381216184|gb|AFF61352.1| paired box protein 7 beta variant 2 [Oncorhynchus mykiss]
Length = 514
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 196 ERKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 255
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 256 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 296
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D ++ + D+ +P VSSI+RVLR +K+ + + + +G
Sbjct: 148 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGERKTKHSIDGIL 207
Query: 193 GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARERLADKIG 248
G GS P S T + + +E FERTHYPD++ RE LA +
Sbjct: 208 G-DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTK 266
Query: 249 LPEARIQVSSINRVLRNLAAQKEQQASAHN 278
L EAR+QV NR R Q +A N
Sbjct: 267 LTEARVQVWFSNRRARWRKQAGANQLAAFN 296
>gi|54289374|gb|AAV31937.1| paired-box 3 [Xenopus laevis]
Length = 460
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE
Sbjct: 163 SIDGILRERAPVSPESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELE 212
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
>gi|80479306|gb|AAI08574.1| Pax3 protein [Xenopus laevis]
Length = 460
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R RT+FT EQ++ LE
Sbjct: 163 SIDGILRERAPVSPESEEGSDIDSEPD----------LPLKRKQRRGRTTFTAEQLEELE 212
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
>gi|270012821|gb|EFA09269.1| gooseberry [Tribolium castaneum]
Length = 406
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 89 PNSSADE---DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
PNSS DE +S+ + LKRK +R+RT+FT EQ+++LE+ F RT YPDV+ RE LA K
Sbjct: 163 PNSSCDESDTESEPGIPLKRKQRRSRTTFTGEQLEALERAFGRTQYPDVYTREELAQKTK 222
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW---AWYPGSTP 202
L EAR+QV NR R QQ +A N S ++ G P + W S
Sbjct: 223 LTEARVQVWFSNRRARLRKQLNSQQLNAFNSMSLPSAFPVQHQYGDPAFNQSTWAQQSYA 282
Query: 203 TPSPAHLALPH 213
+ + + ALPH
Sbjct: 283 SAALSSGALPH 293
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 201 RAFGRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNSMSLPSAF 260
Query: 287 KLRMFNGQPGW---AWYPGSTPTPSPAHLALPH 316
++ G P + W S + + + ALPH
Sbjct: 261 PVQHQYGDPAFNQSTWAQQSYASAALSSGALPH 293
>gi|54289376|gb|AAV31938.1| paired-box 3 [Xenopus laevis]
Length = 459
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE
Sbjct: 162 SIDGILRERAPASPESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELE 211
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 212 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 249
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 212 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 249
>gi|147903833|ref|NP_001088994.1| paired box protein Pax-3-B [Xenopus laevis]
gi|52082692|gb|AAU25939.1| paired-domain transcription factor Pax3delta isoform [Xenopus
laevis]
Length = 461
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE
Sbjct: 164 SIDGILRERAPASPESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELE 213
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 214 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 251
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 214 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 251
>gi|89272731|emb|CAJ82363.1| paired box protein 3 [Xenopus (Silurana) tropicalis]
Length = 462
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE
Sbjct: 164 SIDGILRERAPASPESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELE 213
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 214 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 251
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 214 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 251
>gi|426222842|ref|XP_004005591.1| PREDICTED: paired box protein Pax-7 [Ovis aries]
Length = 805
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 495 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 544
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 545 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 579
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 542 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR 579
>gi|254281208|ref|NP_001006776.2| paired box protein Pax-3 [Xenopus (Silurana) tropicalis]
gi|224493169|sp|Q28DP6.2|PAX3_XENTR RecName: Full=Paired box protein Pax-3; AltName: Full=Paired-domain
transcription factor Pax3
Length = 461
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE
Sbjct: 163 SIDGILRERAPASPESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELE 212
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
>gi|410969539|ref|XP_003991252.1| PREDICTED: uncharacterized protein LOC101082767 [Felis catus]
Length = 1024
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 714 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 763
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
D++ RE LA + L EAR+QV NR R Q A N
Sbjct: 764 DIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFN 806
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ FERTHYPD++ RE LA + L EAR+QV NR R Q A N
Sbjct: 755 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFN 806
>gi|45383598|ref|NP_989600.1| paired box 3 [Gallus gallus]
gi|19032358|dbj|BAB85652.1| paired-box transcription factor protein PAX3 [Gallus gallus]
Length = 484
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAAQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|328778294|ref|XP_394848.4| PREDICTED: protein gooseberry-neuro-like [Apis mellifera]
Length = 441
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 64 NPGSVTPISR--------DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSF 114
+P SV+ ISR DD K+ + I +D +S+ + LKRK +R+RT+F
Sbjct: 127 DPPSVSSISRLLRGGRPGDDGKKDYTIDGILGGRCGDESDTESEPGIPLKRKQRRSRTTF 186
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
T EQ++ LE F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 187 TGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 233
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 198 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 233
>gi|555819|gb|AAA80574.1| paired box homeotic protein [Homo sapiens]
Length = 283
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 2 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 51
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 52 TREELAQRAKLTEARVQVWFSNRRAR 77
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 40 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 77
>gi|340724274|ref|XP_003400508.1| PREDICTED: protein gooseberry-neuro-like [Bombus terrestris]
Length = 442
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 64 NPGSVTPISR--------DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSF 114
+P SV+ ISR DD K+ + I +D +S+ + LKRK +R+RT+F
Sbjct: 128 DPPSVSSISRLLRGGRPGDDGKKDYTIDGILGGRCGDESDTESEPGIPLKRKQRRSRTTF 187
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
T EQ++ LE F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 188 TGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 234
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 199 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 234
>gi|325980252|gb|ADZ48385.1| Pax3 [Polyodon spathula]
Length = 285
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 25/154 (16%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + SDI SEP+ L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 94 SIDGILGDRSSHSDEGSDIESEPD----------LPLKRKQRRSRTTFTAEQLEELERAF 143
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 144 ERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------NQLM 189
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLA-LPHNPGSVT 219
FN + P + PT P L+ P+ P S++
Sbjct: 190 AFNHLIPGGFPPSAMPTLQPYQLSDSPYPPTSIS 223
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 141 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------N 186
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLA-LPHNPGSVT 322
+L FN + P + PT P L+ P+ P S++
Sbjct: 187 QLMAFNHLIPGGFPPSAMPTLQPYQLSDSPYPPTSIS 223
>gi|148668013|gb|EDL00430.1| paired box gene 3 [Mus musculus]
Length = 284
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 3 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 52
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 53 TREELAQRAKLTEARVQVWFSNRRAR 78
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 41 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 78
>gi|385251413|ref|NP_001245265.1| paired box gene 7b [Oncorhynchus mykiss]
gi|381216192|gb|AFF61356.1| paired box protein 7 beta variant 6 [Oncorhynchus mykiss]
Length = 497
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 179 ERKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 238
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 239 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 279
>gi|432857455|ref|XP_004068689.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oryzias
latipes]
Length = 510
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 15/110 (13%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G +P SR D SD++SEP+ L LKRK +R+RT+FT EQ++ LEK
Sbjct: 197 GDKSPGSRTD-----DGSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKA 241
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 242 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 291
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 291
>gi|269784949|ref|NP_001161626.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
gi|268054257|gb|ACY92615.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
Length = 242
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 3/85 (3%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
DD ++ E+ + IN E N++ DE ++ + +K +R+RT+FT Q+ +LEK FERTHYPD
Sbjct: 69 DDIEDLENGNKINEEENTNTDE---IQSKKAKKQRRSRTTFTTNQLGALEKVFERTHYPD 125
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
F RE LA K+ L EAR+QV NR
Sbjct: 126 AFVREELAKKVDLSEARVQVWFQNR 150
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 116 KVFERTHYPDAFVREELAKKVDLSEARVQVWFQNR 150
>gi|168479562|dbj|BAG11537.1| paired-box protein 3/7 [Eptatretus burgeri]
Length = 451
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
S + S+D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 139 GSTVDDSSDIDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTK 198
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQASAHN 175
L EAR+QV NR R Q +A N
Sbjct: 199 LTEARVQVWFSNRRARWRKQAGANQLAAFN 228
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 177 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 228
>gi|381216190|gb|AFF61355.1| paired box protein 7 beta variant 5 [Oncorhynchus mykiss]
Length = 501
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + +D +S+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 183 ERKTKHSIDGILGDKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 242
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 243 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D ++ + D+ +P VSSI+RVLR +K+ + + + +G
Sbjct: 135 DKLLKDGVCDRSTVPSGEASVSSISRVLRARFGKKDDDDDSDKKDEDGERKTKHSIDGIL 194
Query: 193 GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE----FERTHYPDVFARERLADKIG 248
G GS P S T + + +E FERTHYPD++ RE LA +
Sbjct: 195 G-DKDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTK 253
Query: 249 LPEARIQVSSINRVLRNLAAQKEQQASAHN 278
L EAR+QV NR R Q +A N
Sbjct: 254 LTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|148231303|ref|NP_001088993.1| paired box protein Pax-3-A [Xenopus laevis]
gi|82198154|sp|Q645N4.1|PAX3A_XENLA RecName: Full=Paired box protein Pax-3-A; Short=xPax3-A; AltName:
Full=Paired-domain transcription factor Pax3-A
gi|52082694|gb|AAU25940.1| paired-domain transcription factor Pax3 [Xenopus laevis]
Length = 484
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 13/98 (13%)
Query: 67 SVTPISRDDAK---EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
S+ I R+ A E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE
Sbjct: 187 SIDGILRERAPVSPESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELE 236
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
>gi|195586621|ref|XP_002083072.1| GD11918 [Drosophila simulans]
gi|194195081|gb|EDX08657.1| GD11918 [Drosophila simulans]
Length = 427
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 171 SEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTS 178
V NR R QQ S+ TS
Sbjct: 231 VWFSNRRARLRKQLNTQQVSSFAPTS 256
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R Q
Sbjct: 188 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQ 247
Query: 273 QASAHNQTS 281
Q S+ TS
Sbjct: 248 QVSSFAPTS 256
>gi|432857459|ref|XP_004068691.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oryzias
latipes]
Length = 517
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 63/110 (57%), Gaps = 15/110 (13%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G +P SR D SD++SEP+ L LKRK +R+RT+FT EQ++ LEK
Sbjct: 204 GDKSPGSRTD-----DGSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKA 248
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 249 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 298
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 247 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 298
>gi|225903375|ref|NP_001139621.1| paired box gene 7b [Danio rerio]
gi|225355242|gb|ACN88553.1| paired box protein 7b [Danio rerio]
Length = 510
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD+
Sbjct: 201 DKGRMDEVSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDI 250
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 251 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 291
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 240 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 291
>gi|354505845|ref|XP_003514978.1| PREDICTED: paired box protein Pax-3-like, partial [Cricetulus
griseus]
Length = 288
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 2 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 51
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 52 TREELAQRAKLTEARVQVWFSNRRAR 77
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 40 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 77
>gi|224493168|sp|Q0IH87.2|PAX3B_XENLA RecName: Full=Paired box protein Pax-3-B; Short=xPax3-B; AltName:
Full=Paired-domain transcription factor Pax3-B
Length = 483
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 10/84 (11%)
Query: 78 EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++ R
Sbjct: 200 ESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTR 249
Query: 138 ERLADKIGLPEARIQVSSINRVLR 161
E LA + L EAR+QV NR R
Sbjct: 250 EELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|326925807|ref|XP_003209100.1| PREDICTED: paired box protein Pax-3-like [Meleagris gallopavo]
Length = 304
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 43 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 92
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 93 TREELAQRAKLTEARVQVWFSNRRAR 118
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 81 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 118
>gi|331271832|gb|AED02521.1| paired box 7 protein [Coturnix japonica]
Length = 248
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 58 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 107
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 108 ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 156
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 105 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 156
>gi|359682153|gb|AEV53628.1| paired box protein 7 [Sparus aurata]
Length = 502
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGSRMNEVSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA L EAR+QV NR R Q +A N
Sbjct: 235 ERTHYPDIYTREELAQGTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA L EAR+QV NR R Q +A N
Sbjct: 232 KAFERTHYPDIYTREELAQGTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 283
>gi|380027561|ref|XP_003697490.1| PREDICTED: protein gooseberry-neuro-like [Apis florea]
Length = 442
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 64 NPGSVTPISR--------DDAKEHESTSDI--NSEPNSSADEDSQMRLRLKRKLQRNRTS 113
+P SV+ ISR DD K+ + I +D +S+ + LKRK +R+RT+
Sbjct: 127 DPPSVSSISRLLRGGRPGDDGKKDYTIDGILGGGRCGDESDTESEPGIPLKRKQRRSRTT 186
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
FT EQ++ LE F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 187 FTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 234
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 199 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 234
>gi|307197090|gb|EFN78458.1| Segmentation protein paired [Harpegnathos saltator]
Length = 481
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 64 NPGSVTPISR-DDAKEHESTSDINSEPNSS-ADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
N SV+ ISR +++E + I SS +D DS+ + LKRK +R+RT+FT Q+D
Sbjct: 85 NAPSVSAISRLIRGRDNEDDARIGEVKTSSGSDCDSEPGITLKRKQRRSRTTFTAHQLDE 144
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
LEK FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 145 LEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 184
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 147 KAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 184
>gi|337216969|gb|AEI60176.1| Pax7-forkhead fusion protein [Homo sapiens]
Length = 405
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 2 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 51
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ L EAR+QV NR R Q +A N
Sbjct: 52 RTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 84
>gi|167773479|gb|ABZ92174.1| paired box 3 [synthetic construct]
Length = 835
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|6636097|gb|AAF20054.1|AF178854_1 Pax3-forkhead fusion protein [synthetic construct]
gi|431254|gb|AAC50053.1| PAX3 protein-forkhead transcription factor fusion [Homo sapiens]
Length = 836
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|2145076|gb|AAB58415.1| paired-box transcription factor protein [Coturnix coturnix]
Length = 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 190 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 239
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 240 DIYTREELAQRAKLTEARVQVWFSNRRAR 268
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 231 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 268
>gi|327267053|ref|XP_003218317.1| PREDICTED: paired box protein Pax-3-like isoform 1 [Anolis
carolinensis]
Length = 484
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|383852902|ref|XP_003701964.1| PREDICTED: protein gooseberry-neuro-like [Megachile rotundata]
Length = 440
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 64 NPGSVTPISR--------DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSF 114
+P SV+ ISR DD K+ + I +D +S+ + LKRK +R+RT+F
Sbjct: 127 DPPSVSSISRLLRGGRPGDDGKKDYTIDGILGGRCGDESDTESEPGIPLKRKQRRSRTTF 186
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
T EQ++ LE F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 187 TGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 233
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 198 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 233
>gi|431917932|gb|ELK17161.1| Paired box protein Pax-3 [Pteropus alecto]
Length = 320
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 34 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 83
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 84 TREELAQRAKLTEARVQVWFSNRRAR 109
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 72 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 109
>gi|224059972|ref|XP_002194011.1| PREDICTED: paired box protein Pax-3 [Taeniopygia guttata]
Length = 529
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 10/103 (9%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 240 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 289
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
D++ RE LA + L EAR+QV NR R Q A N
Sbjct: 290 DIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFN 332
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ FERTHYPD++ RE LA + L EAR+QV NR R Q A N
Sbjct: 281 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFN 332
>gi|348534166|ref|XP_003454574.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oreochromis
niloticus]
Length = 509
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
+ ++D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EA
Sbjct: 205 DDASDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 264
Query: 150 RIQVSSINRVLRNLAAQKEQQASAHN 175
R+QV NR R Q +A N
Sbjct: 265 RVQVWFSNRRARWRKQAGANQLAAFN 290
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 239 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 290
>gi|345304995|ref|XP_001507033.2| PREDICTED: paired box protein Pax-3 [Ornithorhynchus anatinus]
Length = 483
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|344258001|gb|EGW14105.1| Paired box protein Pax-3 [Cricetulus griseus]
Length = 301
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 15 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 64
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 65 TREELAQRAKLTEARVQVWFSNRRAR 90
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 53 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 90
>gi|348534168|ref|XP_003454575.1| PREDICTED: paired box protein Pax-7-like isoform 4 [Oreochromis
niloticus]
Length = 518
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
+ ++D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EA
Sbjct: 214 DDASDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 273
Query: 150 RIQVSSINRVLRNLAAQKEQQASAHN 175
R+QV NR R Q +A N
Sbjct: 274 RVQVWFSNRRARWRKQAGANQLAAFN 299
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 248 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 299
>gi|18859207|ref|NP_571352.1| paired box protein Pax-3 [Danio rerio]
gi|2909765|gb|AAC41253.1| transcription factor PAX3 [Danio rerio]
Length = 509
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 25/157 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + SD++SEP L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 190 SIDGILGDRSSHSDEGSDVDSEPG----------LPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------NQLM 285
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLA-LPHNPGSVTPIS 222
FN + P + + P LA P+ P S++ +S
Sbjct: 286 AFNHLIPGGFPPSAMSSLQPYQLADSPYPPSSISQVS 322
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------N 282
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLA-LPHNPGSVTPIS 325
+L FN + P + + P LA P+ P S++ +S
Sbjct: 283 QLMAFNHLIPGGFPPSAMSSLQPYQLADSPYPPSSISQVS 322
>gi|326932470|ref|XP_003212340.1| PREDICTED: paired box protein Pax-7, partial [Meleagris gallopavo]
Length = 330
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 26/149 (17%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 7 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 56
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP 202
+ L EAR+QV NR A+ +QA A ++L FN + P P
Sbjct: 57 RTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLLPGGFPPTGMP 102
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER 231
T P LP + T IS+D + R
Sbjct: 103 TLPPYQ--LPDSTYPTTTISQDGSSTVHR 129
>gi|48928118|gb|AAT47737.1| PAX3/NCOA1 fusion protein [Homo sapiens]
Length = 850
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|449266925|gb|EMC77903.1| Paired box protein Pax-3, partial [Columba livia]
Length = 459
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 170 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 219
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 220 DIYTREELAQRAKLTEARVQVWFSNRRAR 248
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 211 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 248
>gi|328719097|ref|XP_001949018.2| PREDICTED: paired box protein Pax-3-B-like [Acyrthosiphon pisum]
Length = 574
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 67 SVTPISR-------DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQI 119
S++ ISR DD+ + SD + + +D DS+ + LKRK +R+RT+FT Q+
Sbjct: 148 SISAISRLLRGHDGDDSASEKKVSD--GKTSDGSDCDSEPGIPLKRKQRRSRTTFTALQL 205
Query: 120 DSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
D LEK FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 206 DELEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 247
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 103 LKRKLQRNRTS----FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
++R+++ +T F+ E D + E + H RE L D+ P +S+I+R
Sbjct: 99 VERRIEEYKTENPGIFSWEIRDRNDNEPAQYHDNKRLIREGLCDRGSAPS----ISAISR 154
Query: 159 VLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 218
+LR +++ + S+ + +PG P + +
Sbjct: 155 LLR---GHDGDDSASEKKVSDGKTSDGSDCDSEPGI-----------PLKRKQRRSRTTF 200
Query: 219 TPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
T + D+ K FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 201 TALQLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 247
>gi|26337003|dbj|BAC32185.1| unnamed protein product [Mus musculus]
Length = 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|426221627|ref|XP_004005010.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Ovis
aries]
Length = 489
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 200 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 249
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 250 DIYTREELAQRAKLTEARVQVWFSNRRAR 278
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 241 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 278
>gi|350420707|ref|XP_003492597.1| PREDICTED: protein gooseberry-neuro-like [Bombus impatiens]
Length = 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 64 NPGSVTPISR--------DDAKEHESTSDI--NSEPNSSADEDSQMRLRLKRKLQRNRTS 113
+P SV+ ISR DD K+ + I +D +S+ + LKRK +R+RT+
Sbjct: 127 DPPSVSSISRLLRGGRPGDDGKKDYTIDGILGGGRCGDESDTESEPGIPLKRKQRRSRTT 186
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
FT EQ++ LE F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 187 FTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 234
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 199 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 234
>gi|31563340|ref|NP_852122.1| paired box protein Pax-3 isoform PAX3 [Homo sapiens]
gi|332246649|ref|XP_003272465.1| PREDICTED: paired box protein Pax-3 isoform 2 [Nomascus leucogenys]
gi|1172022|sp|P23760.2|PAX3_HUMAN RecName: Full=Paired box protein Pax-3; AltName: Full=HuP2
gi|119591199|gb|EAW70793.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
gi|119591201|gb|EAW70795.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_e [Homo
sapiens]
Length = 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|390464839|ref|XP_003733294.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|388240434|dbj|BAM15711.1| paired box gene 7 [Scyliorhinus torazame]
Length = 495
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 77/152 (50%), Gaps = 26/152 (17%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
+ SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE
Sbjct: 199 DGASDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREE 248
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPG 199
LA + L EAR+QV NR A+ +QA A ++L FN + P
Sbjct: 249 LAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLLPGGFPPT 294
Query: 200 STPTPSPAHLALPHNPGSVTPISRDDAKEFER 231
PT P L PG T +S+D R
Sbjct: 295 GMPTLPPYQLPEASYPG--TTLSQDGGSTVHR 324
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 233 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---------N 278
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
+L FN + P PT P L PG T +S+D
Sbjct: 279 QLAAFNHLLPGGFPPTGMPTLPPYQLPEASYPG--TTLSQD 317
>gi|345797572|ref|XP_545664.3| PREDICTED: paired box protein Pax-3 [Canis lupus familiaris]
Length = 482
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 193 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 242
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 243 DIYTREELAQRAKLTEARVQVWFSNRRAR 271
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 234 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 271
>gi|53592|emb|CAA42008.1| DNA binding protein [Mus musculus]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|444512202|gb|ELV10061.1| Paired box protein Pax-3 [Tupaia chinensis]
Length = 458
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 169 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 218
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 219 DIYTREELAQRAKLTEARVQVWFSNRRAR 247
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 210 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 247
>gi|344268490|ref|XP_003406091.1| PREDICTED: paired box protein Pax-3 isoform 2 [Loxodonta africana]
Length = 483
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|344268488|ref|XP_003406090.1| PREDICTED: paired box protein Pax-3 isoform 1 [Loxodonta africana]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|348556456|ref|XP_003464037.1| PREDICTED: paired box protein Pax-3-like [Cavia porcellus]
Length = 484
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|31563342|ref|NP_852123.1| paired box protein Pax-3 isoform PAX3d [Homo sapiens]
gi|297264992|ref|XP_001107687.2| PREDICTED: paired box protein Pax-3 isoform 8 [Macaca mulatta]
gi|332246647|ref|XP_003272464.1| PREDICTED: paired box protein Pax-3 isoform 1 [Nomascus leucogenys]
gi|410036241|ref|XP_001165390.2| PREDICTED: paired box protein Pax-3 isoform 6 [Pan troglodytes]
gi|426338712|ref|XP_004033318.1| PREDICTED: paired box protein Pax-3 isoform 1 [Gorilla gorilla
gorilla]
gi|72533682|gb|AAI01302.1| Paired box 3 [Homo sapiens]
gi|119591200|gb|EAW70794.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_f [Homo
sapiens]
gi|158255992|dbj|BAF83967.1| unnamed protein product [Homo sapiens]
Length = 484
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|281371323|ref|NP_446162.1| paired box 3 [Rattus norvegicus]
Length = 484
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|188219638|ref|NP_001120838.1| paired box protein Pax-3 isoform PAX3i [Homo sapiens]
gi|397495768|ref|XP_003818718.1| PREDICTED: paired box protein Pax-3 isoform 1 [Pan paniscus]
gi|72533358|gb|AAI01300.1| Paired box 3 [Homo sapiens]
gi|72533360|gb|AAI01303.1| Paired box 3 [Homo sapiens]
gi|72533551|gb|AAI01301.1| Paired box 3 [Homo sapiens]
gi|89130716|gb|AAI14364.1| Paired box 3 [Homo sapiens]
Length = 483
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|86355079|dbj|BAE78774.1| paired box containing Pax3 [Pelodiscus sinensis]
Length = 418
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 129 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 178
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 179 DIYTREELAQRAKLTEARVQVWFSNRRAR 207
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 170 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 207
>gi|403266763|ref|XP_003925532.1| PREDICTED: paired box protein Pax-3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|226958470|ref|NP_001152992.1| paired box protein Pax-3 isoform b [Mus musculus]
gi|26336973|dbj|BAC32170.1| unnamed protein product [Mus musculus]
gi|28913680|gb|AAH48699.1| Pax3 protein [Mus musculus]
Length = 484
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|226958472|ref|NP_032807.3| paired box protein Pax-3 isoform a [Mus musculus]
gi|60416408|sp|P24610.2|PAX3_MOUSE RecName: Full=Paired box protein Pax-3
gi|12852118|dbj|BAB29280.1| unnamed protein product [Mus musculus]
gi|74201793|dbj|BAE28501.1| unnamed protein product [Mus musculus]
Length = 479
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|338725617|ref|XP_001495022.3| PREDICTED: paired box protein Pax-3 isoform 1 [Equus caballus]
Length = 483
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|440912894|gb|ELR62418.1| Paired box protein Pax-3, partial [Bos grunniens mutus]
Length = 488
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 199 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 248
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 249 DIYTREELAQRAKLTEARVQVWFSNRRAR 277
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 240 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 277
>gi|403266765|ref|XP_003925533.1| PREDICTED: paired box protein Pax-3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 483
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|338725615|ref|XP_003365174.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 479
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|301779609|ref|XP_002925222.1| PREDICTED: paired box protein Pax-3-like [Ailuropoda melanoleuca]
Length = 483
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|390464841|ref|XP_002749874.2| PREDICTED: paired box protein Pax-3 isoform 1 [Callithrix jacchus]
Length = 483
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|194886966|ref|XP_001976720.1| GG23031 [Drosophila erecta]
gi|190659907|gb|EDV57120.1| GG23031 [Drosophila erecta]
Length = 427
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 171 SEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSET 180
V NR R QQ + TS T
Sbjct: 231 VWFSNRRARLRKQLNTQQVPSFAPTSTT 258
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R Q
Sbjct: 188 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQ 247
Query: 273 QASAHNQTSET 283
Q + TS T
Sbjct: 248 QVPSFAPTSTT 258
>gi|49903856|gb|AAH76069.1| Pax3a protein [Danio rerio]
Length = 445
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 25/157 (15%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + SD++SEP L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 190 SIDGILGDRSSHSDEGSDVDSEPG----------LPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR 186
ERTHYPD++ RE LA + L EAR+QV NR A+ +QA A ++L
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------NQLM 285
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLA-LPHNPGSVTPIS 222
FN + P + + P LA P+ P S++ +S
Sbjct: 286 AFNHLIPGGFPPSAMSSLQPYQLADSPYPPSSISQVS 322
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------N 282
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLA-LPHNPGSVTPIS 325
+L FN + P + + P LA P+ P S++ +S
Sbjct: 283 QLMAFNHLIPGGFPPSAMSSLQPYQLADSPYPPSSISQVS 322
>gi|355750875|gb|EHH55202.1| hypothetical protein EGM_04358 [Macaca fascicularis]
Length = 473
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|332205885|ref|NP_001193747.1| paired box protein Pax-3 [Bos taurus]
gi|296490253|tpg|DAA32366.1| TPA: paired box 3 [Bos taurus]
Length = 484
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|281345944|gb|EFB21528.1| hypothetical protein PANDA_014672 [Ailuropoda melanoleuca]
Length = 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|355565224|gb|EHH21713.1| hypothetical protein EGK_04840 [Macaca mulatta]
Length = 473
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|74180492|dbj|BAE34184.1| unnamed protein product [Mus musculus]
Length = 484
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|395823365|ref|XP_003784957.1| PREDICTED: paired box protein Pax-3 [Otolemur garnettii]
Length = 483
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|149711152|ref|XP_001495210.1| PREDICTED: paired box protein Pax-3 isoform 2 [Equus caballus]
Length = 505
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|429836904|dbj|BAM72542.1| paired box 3, partial [Pipistrellus abramus]
Length = 403
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 134 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 183
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 184 DIYTREELAQRAKLTEARVQVWFSNRRAR 212
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 175 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 212
>gi|402889486|ref|XP_003908046.1| PREDICTED: paired box protein Pax-3 isoform 1 [Papio anubis]
Length = 483
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|74190896|dbj|BAE28229.1| unnamed protein product [Mus musculus]
Length = 479
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTVEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|431906259|gb|ELK10456.1| Paired box protein Pax-7 [Pteropus alecto]
Length = 342
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYP
Sbjct: 30 RGPGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYP 79
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
D++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 80 DIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 122
>gi|432916066|ref|XP_004079275.1| PREDICTED: paired box protein Pax-3 [Oryzias latipes]
Length = 487
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + SD++SEP L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 190 SIDGILGDRSSHSDEGSDVDSEPG----------LPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
>gi|560583|gb|AAB30807.1| PAX7-FKHR=chimeric transcription factor(FKHR, PAX7) {translocation}
[human, alveolar rhabdomyosarcoma patient, Peptide, 420
aa]
Length = 420
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 101/226 (44%), Gaps = 54/226 (23%)
Query: 3 VSSINRVLR-NLAAQKEQQASAHNQTSETVYDKLR-MFNGQPGWAWYPGSTPPPSPAHLA 60
VSSI+RVLR ++E+ A A + ++ K + +G G
Sbjct: 122 VSSISRVLRIKFGKKEEEDAEADKKEADDGEKKAKHSIDGILG----------------- 164
Query: 61 LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQID 120
+ A + SD+ SEP+ L LKRK +R+RT+FT EQ++
Sbjct: 165 -----------DKGSANRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLE 203
Query: 121 SLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
LEK FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A
Sbjct: 204 ELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA------- 251
Query: 181 VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA 226
++L FN + P PT P L + TPIS+ D
Sbjct: 252 --NQLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYQPTTTPISQSDG 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 39/235 (16%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR-NLAAQKEQQ 170
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR ++E+
Sbjct: 85 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVP----SVSSISRVLRIKFGKKEEED 140
Query: 171 ASAHNQTSETVYDK----LRMFNGQPGWA--WYPGSTPTPSPAHLALPHNPGSVTPISRD 224
A A + ++ K + G G A GS P S T + +
Sbjct: 141 AEADKKEADDGEKKAKHSIDGILGDKGSANRLDEGSDVESEPDLPLKRKQRRSRTTFTAE 200
Query: 225 DAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 280
+E FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A
Sbjct: 201 QLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA---- 251
Query: 281 SETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQ 335
++L FN + P PT P L + TPIS+ D V +
Sbjct: 252 -----NQLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYQPTTTPISQSDGGSTVHR 301
>gi|357607879|gb|EHJ65721.1| hypothetical protein KGM_00017 [Danaus plexippus]
Length = 321
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%), Gaps = 10/80 (12%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
+SDI SEP L LKRK +R+RT+FT EQ+D+LE+ F RT YPDV+ RE LA
Sbjct: 21 SSDIESEPG----------LTLKRKQRRSRTTFTGEQLDALERAFHRTQYPDVYTREELA 70
Query: 142 DKIGLPEARIQVSSINRVLR 161
+ GL EARIQV NR R
Sbjct: 71 LQTGLTEARIQVWFSNRRAR 90
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA + GL EARIQV NR R
Sbjct: 53 RAFHRTQYPDVYTREELALQTGLTEARIQVWFSNRRAR 90
>gi|270009304|gb|EFA05752.1| paired [Tribolium castaneum]
Length = 447
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
SV+ ISR + D +++ +D DS+ + LKRK +R+RT+FT Q+D LEK F
Sbjct: 136 SVSAISRLLRGKGGECDDKSTDNEGVSDCDSEPGIPLKRKQRRSRTTFTAHQLDELEKAF 195
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERT YPD++ RE LA + L EARIQV NR R
Sbjct: 196 ERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 230
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 193 KAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 230
>gi|126343736|ref|XP_001379904.1| PREDICTED: paired box protein Pax-7-like, partial [Monodelphis
domestica]
Length = 309
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 7 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 56
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ L EAR+QV NR R Q +A N
Sbjct: 57 RTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 89
>gi|291392294|ref|XP_002712543.1| PREDICTED: paired box 3-like [Oryctolagus cuniculus]
Length = 505
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|109726691|gb|ABG45802.1| paired box protein Pax-3-like protein [Bos taurus]
Length = 195
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 2 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 51
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 52 TREELAQRAKLTEARVQVWFSNRRAR 77
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 40 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 77
>gi|402853155|ref|XP_003891265.1| PREDICTED: paired box protein Pax-7 [Papio anubis]
Length = 504
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 26/149 (17%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 202 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 251
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP 202
+ L EAR+QV NR A+ +QA A ++L FN + P P
Sbjct: 252 RTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLLPGGFPPTGMP 297
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER 231
T P LP + T IS+D R
Sbjct: 298 TLPPYQ--LPDSTYPTTTISQDGGSTVHR 324
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 122 LEKEFE--RTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLR------NLAA 165
+EK+ E + P +F+ R+RL D+ +P VSSI+RVLR
Sbjct: 113 VEKKIEEYKRENPGMFSWEIRDRLLKDGHCDRSTVPS----VSSISRVLRIKFGKKEEED 168
Query: 166 QKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDD 225
+ +++ + ++ D + + + G GS P S T + +
Sbjct: 169 EADKKEDDGEKKAKHSIDGI-LGDKASGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQ 227
Query: 226 AKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+E FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 228 LEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|31563344|ref|NP_852124.1| paired box protein Pax-3 isoform PAX3e [Homo sapiens]
gi|297669550|ref|XP_002812957.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-3 [Pongo
abelii]
gi|119591202|gb|EAW70796.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_g [Homo
sapiens]
Length = 505
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EAR+Q
Sbjct: 180 SDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 239
Query: 153 VSSINRVLRNLAAQKEQQASAHN 175
V NR R QQ + N
Sbjct: 240 VWFSNRRARWRKQAGAQQLAGFN 262
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R QQ + N
Sbjct: 211 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGAQQLAGFN 262
>gi|124054328|gb|ABM89379.1| PAX7 [Pongo pygmaeus]
Length = 189
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 76/149 (51%), Gaps = 26/149 (17%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 7 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 56
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTP 202
+ L EAR+QV NR A+ +QA A ++L FN + P P
Sbjct: 57 RTKLTEARVQVWFSNR-----RARWRKQAGA---------NQLAAFNHLLPGGFPPAGMP 102
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER 231
T P LP + T IS+D R
Sbjct: 103 TLPPYQ--LPDSTYPTTTISQDGGSTVHR 129
>gi|195154829|ref|XP_002018315.1| GL17644 [Drosophila persimilis]
gi|194114111|gb|EDW36154.1| GL17644 [Drosophila persimilis]
Length = 432
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 171 SEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 231 VWFSNRRAR 239
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 188 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 239
>gi|125809511|ref|XP_001361149.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
gi|54636323|gb|EAL25726.1| GA17419 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 171 SEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 231 VWFSNRRAR 239
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 188 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 239
>gi|327267055|ref|XP_003218318.1| PREDICTED: paired box protein Pax-3-like isoform 2 [Anolis
carolinensis]
Length = 461
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 175 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 224
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 225 TREELAQRAKLTEARVQVWFSNRRAR 250
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 54/93 (58%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G IS DD + E + + P S E KRK +R RT+FT+ Q++ LEK
Sbjct: 122 GQQMGISTDDVRPEEEGAHPRAAPTSPESEADVDDFAPKRKQRRYRTTFTSFQLEELEKA 181
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 182 FSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 214
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 180 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 214
>gi|432103455|gb|ELK30560.1| Paired box protein Pax-3 [Myotis davidii]
Length = 506
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 183 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 232
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 233 DIYTREELAQRAKLTEARVQVWFSNRRAR 261
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 224 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 261
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
IS ++ + E ++ + P S E KRK +R RT+FT+ Q++ LEK F RTH
Sbjct: 3 ISTEEVRTEEESNHPRAAPTSPESETEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTH 62
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDVF RE LA KIGL EARIQV NR
Sbjct: 63 YPDVFTREELAMKIGLTEARIQVWFQNR 90
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 56 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 90
>gi|47229844|emb|CAG07040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 591
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
+ +D DS+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EA
Sbjct: 239 DDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEA 298
Query: 150 RIQVSSINRVLRNLAAQKEQQASAHN 175
R+QV NR R Q +A N
Sbjct: 299 RVQVWFSNRRARWRKQAGANQLAAFN 324
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K FERTHYPD++ RE LA + L EAR+QV NR R Q +A N
Sbjct: 273 KAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 324
>gi|348500845|ref|XP_003437982.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 546
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + SD++SEP L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 198 RSSASHSDEGSDVDSEPG----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 247
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 248 DIYTREELAQRAKLTEARVQVWFSNRRAR 276
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 239 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 276
>gi|195124303|ref|XP_002006633.1| GI21167 [Drosophila mojavensis]
gi|193911701|gb|EDW10568.1| GI21167 [Drosophila mojavensis]
Length = 437
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 177 SEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 236
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 237 VWFSNRRAR 245
>gi|56714085|gb|AAW24013.1| homeodomain protein Pax37a, partial [Oikopleura dioica]
Length = 440
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
N+ DE + +KRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EA
Sbjct: 173 NNHEDELDESVRPVKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEA 232
Query: 150 RIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHL 209
R+QV NR R +Q +A +L M PG A G P +P ++
Sbjct: 233 RVQVGFSNRRARG----GKQVGAA----------QLPM----PGSASIQGYNPL-APTYM 273
Query: 210 ALPHNPGSVT 219
LP PGS +
Sbjct: 274 GLPDTPGSAS 283
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR R +Q +A
Sbjct: 207 KCFERTHYPDIYTREELAQRTKLTEARVQVGFSNRRARG----GKQVGAA---------- 252
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVT 322
+L M PG A G P +P ++ LP PGS +
Sbjct: 253 QLPM----PGSASIQGYNPL-APTYMGLPDTPGSAS 283
>gi|17647491|ref|NP_523863.1| gooseberry [Drosophila melanogaster]
gi|123376|sp|P09082.1|GSB_DROME RecName: Full=Protein gooseberry; AltName: Full=BSH9; AltName:
Full=Protein gooseberry distal
gi|10727095|gb|AAF47315.2| gooseberry [Drosophila melanogaster]
gi|212287970|gb|ACJ23460.1| FI07617p [Drosophila melanogaster]
Length = 427
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 85 INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
+ SE S ++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA
Sbjct: 165 VGSEDES--EDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQST 222
Query: 145 GLPEARIQVSSINRVLR 161
GL EAR+QV NR R
Sbjct: 223 GLTEARVQVWFSNRRAR 239
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 188 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 239
>gi|432891029|ref|XP_004075513.1| PREDICTED: paired box protein Pax-3-like [Oryzias latipes]
Length = 495
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 52/79 (65%), Gaps = 10/79 (12%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ+D LE+ FERTHYPD++ RE LA
Sbjct: 209 SDVESEPD----------LPLKRKQRRSRTTFTAEQLDELERAFERTHYPDIYTREELAQ 258
Query: 143 KIGLPEARIQVSSINRVLR 161
+ L EAR+QV NR R
Sbjct: 259 RAKLTEARVQVWFSNRRAR 277
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 240 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 277
>gi|66571172|gb|AAY51551.1| IP01408p [Drosophila melanogaster]
gi|220943358|gb|ACL84222.1| CG3388-PA [synthetic construct]
Length = 427
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 85 INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
+ SE S ++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA
Sbjct: 165 VGSEDES--EDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQST 222
Query: 145 GLPEARIQVSSINRVLR 161
GL EAR+QV NR R
Sbjct: 223 GLTEARVQVWFSNRRAR 239
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 188 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 239
>gi|340724544|ref|XP_003400641.1| PREDICTED: LOW QUALITY PROTEIN: segmentation protein paired-like
[Bombus terrestris]
Length = 502
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 67 SVTPISR----DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
SV+ ISR D ++ D + + +S +D +S+ + LKRK +R+RT+FT Q+D L
Sbjct: 147 SVSAISRLLRGRDPEDETKLGDRDGKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDEL 206
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
E+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 207 ERAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 245
>gi|51869703|emb|CAH04388.1| paired box protein 7 [Salmo salar]
Length = 516
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 216 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 265
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ L EAR+QV NR R Q +A N
Sbjct: 266 RTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 298
>gi|195380431|ref|XP_002048974.1| GJ21022 [Drosophila virilis]
gi|194143771|gb|EDW60167.1| GJ21022 [Drosophila virilis]
Length = 442
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 176 SEDDTEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQGTGLTEARVQ 235
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 236 VWFSNRRAR 244
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 193 SRTTFSNDQIDALERIFARTQYPDVYTREELAQGTGLTEARVQVWFSNRRAR 244
>gi|327267059|ref|XP_003218320.1| PREDICTED: paired box protein Pax-3-like isoform 4 [Anolis
carolinensis]
Length = 461
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 59/96 (61%), Gaps = 17/96 (17%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G VTP S + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+
Sbjct: 172 GPVTPQSDEG-------SDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERA 214
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 215 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 213 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 250
>gi|308197324|gb|ADO17770.1| Pax3/7-1 protein [Parhyale hawaiensis]
Length = 486
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 74 DDAKEHESTSDINSEPNSS-ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD ++ S I +E S +D +S+ L LKRK +R+RT+FT EQ++ LE+ FE+T YP
Sbjct: 157 DDPRKDHSIDGILAEDGSDVSDTESEPGLTLKRKQRRSRTTFTAEQLEILERSFEKTQYP 216
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
DV+ RE LA K L EAR+QV NR R
Sbjct: 217 DVYTREELAQKARLTEARVQVWFSNRRAR 245
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FE+T YPDV+ RE LA K L EAR+QV NR R
Sbjct: 208 RSFEKTQYPDVYTREELAQKARLTEARVQVWFSNRRAR 245
>gi|338725621|ref|XP_003365175.1| PREDICTED: paired box protein Pax-3 [Equus caballus]
Length = 403
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 231 KRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELASKIGLTEARIQVWFQNR 285
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 251 KAFGRTHYPDVFTREELASKIGLTEARIQVWFQNR 285
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 339 QVWFSNRRAKWRREEKLRNQ 358
QVWF NRRAKWR++EK+ Q
Sbjct: 279 QVWFQNRRAKWRKQEKVGPQ 298
>gi|74096025|ref|NP_001027683.1| Prx1 protein [Ciona intestinalis]
gi|13444981|emb|CAC34833.1| Ci-Rx protein [Ciona intestinalis]
Length = 826
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R + E +S S + P +D D LK+KL+RNRT+FT Q+ LE+ FER+HYP
Sbjct: 529 RQPSNEDQSVSPPSISPTQCSDSD------LKKKLRRNRTTFTTFQLHELERAFERSHYP 582
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV++RE LA KI LPE R+QV NR
Sbjct: 583 DVYSREELAGKINLPEVRVQVWFQNR 608
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FER+HYPDV++RE LA KI LPE R+QV NR
Sbjct: 574 RAFERSHYPDVYSREELAGKINLPEVRVQVWFQNR 608
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G + + QVWF NRRAKWRR+EK+
Sbjct: 586 SREELAGKINLPEVRVQVWFQNRRAKWRRQEKI 618
>gi|31563346|ref|NP_852125.1| paired box protein Pax-3 isoform PAX3h [Homo sapiens]
gi|119591203|gb|EAW70797.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_h [Homo
sapiens]
Length = 407
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 47/70 (67%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P SAD D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL E
Sbjct: 31 PPGSADSDDADEFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTE 90
Query: 149 ARIQVSSINR 158
ARIQV NR
Sbjct: 91 ARIQVWFQNR 100
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 66 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 100
>gi|31563348|ref|NP_852126.1| paired box protein Pax-3 isoform PAX3g [Homo sapiens]
gi|119591198|gb|EAW70792.1| paired box gene 3 (Waardenburg syndrome 1), isoform CRA_d [Homo
sapiens]
Length = 403
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|30142098|gb|AAP13873.1| paired box 3 splice variant PAX3H [Homo sapiens]
Length = 407
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|189240573|ref|XP_974212.2| PREDICTED: similar to AGAP010358-PA [Tribolium castaneum]
Length = 410
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 67 SVTPISR--------DDAKEHESTSDINSE---PNSSADE---DSQMRLRLKRKLQRNRT 112
SV+ ISR D +++ S I E NSS DE +S+ + LKRK +R+RT
Sbjct: 134 SVSSISRLLRGGRKEDPDRKNHSIEGILGEQAHTNSSCDESDTESEPGIPLKRKQRRSRT 193
Query: 113 SFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQAS 172
+FT EQ+++LE+ F RT YPDV+ RE LA K L EAR+QV NR R QQ +
Sbjct: 194 TFTGEQLEALERAFGRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLN 253
Query: 173 AHNQTSETVYDKLRMFNGQPGW---AWYPGSTPTPSPAHLALPH 213
A N S ++ G P + W S + + + ALPH
Sbjct: 254 AFNSMSLPSAFPVQHQYGDPAFNQSTWAQQSYASAALSSGALPH 297
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 205 RAFGRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNSMSLPSAF 264
Query: 287 KLRMFNGQPGW---AWYPGSTPTPSPAHLALPH 316
++ G P + W S + + + ALPH
Sbjct: 265 PVQHQYGDPAFNQSTWAQQSYASAALSSGALPH 297
>gi|297264994|ref|XP_001107509.2| PREDICTED: paired box protein Pax-3 isoform 5 [Macaca mulatta]
gi|332246653|ref|XP_003272467.1| PREDICTED: paired box protein Pax-3 isoform 4 [Nomascus leucogenys]
gi|397495770|ref|XP_003818719.1| PREDICTED: paired box protein Pax-3 isoform 2 [Pan paniscus]
gi|410036243|ref|XP_001165286.2| PREDICTED: paired box protein Pax-3 isoform 3 [Pan troglodytes]
gi|426338714|ref|XP_004033319.1| PREDICTED: paired box protein Pax-3 isoform 2 [Gorilla gorilla
gorilla]
Length = 403
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|24158433|ref|NP_571399.1| paired box 7 isoform 4 [Danio rerio]
gi|2909767|gb|AAC41254.1| transcription factor PAX7A [Danio rerio]
Length = 280
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 12/99 (12%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAA 165
ERTHYPD++ RE LA + L EAR+QV ++ LR L
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQVRYVH--LRYLQC 276
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAA 268
K FERTHYPD++ RE LA + L EAR+QV ++ LR L
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQVRYVH--LRYLQC 276
>gi|51869705|emb|CAH04389.1| paired box protein 7 [Salmo salar]
Length = 508
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 10/93 (10%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 208 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 257
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ L EAR+QV NR R Q +A N
Sbjct: 258 RTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 290
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 87 SEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
S+PNS + D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL
Sbjct: 55 SDPNSDCEADEYAP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGL 111
Query: 147 PEARIQVSSINR 158
EARIQV NR
Sbjct: 112 TEARIQVWFQNR 123
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 89 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 123
>gi|402889488|ref|XP_003908047.1| PREDICTED: paired box protein Pax-3 isoform 2 [Papio anubis]
Length = 403
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|383852872|ref|XP_003701949.1| PREDICTED: protein gooseberry-neuro-like, partial [Megachile
rotundata]
Length = 398
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 57/105 (54%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
D + H + +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YPD
Sbjct: 148 DPRRNHSIDGILGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYPD 207
Query: 134 VFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 178
V+ RE LA K L EAR+QV NR R QQ SA N S
Sbjct: 208 VYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLSAFNTMS 252
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 29/53 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
F RT YPDV+ RE LA K L EAR+QV NR R QQ SA N S
Sbjct: 200 FHRTQYPDVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLSAFNTMS 252
>gi|195489908|ref|XP_002092937.1| GE14464 [Drosophila yakuba]
gi|194179038|gb|EDW92649.1| GE14464 [Drosophila yakuba]
Length = 427
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 171 SEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 231 VWFSNRRAR 239
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 225 DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 198 DALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 239
>gi|390464843|ref|XP_003733295.1| PREDICTED: paired box protein Pax-3 [Callithrix jacchus]
Length = 403
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|19032236|emb|CAC85262.2| Pax-6B protein [Dugesia japonica]
Length = 579
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 79 HESTSDINSEPNSSADED-SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
++ SD NS+ S + S ++ +K QR+RTSFTN+QI+ LEKEFERTHYPDVF+R
Sbjct: 295 NDKISDFNSDRESETERRYSNPESKINKKSQRSRTSFTNDQINLLEKEFERTHYPDVFSR 354
Query: 138 ERLADKIGLPEARIQVSSINR 158
E+L+ + + E RIQV NR
Sbjct: 355 EKLSQNLKVAETRIQVWFSNR 375
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVF+RE+L+ + + E RIQV NR
Sbjct: 341 KEFERTHYPDVFSREKLSQNLKVAETRIQVWFSNR 375
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 19/22 (86%)
Query: 333 VQQSARQVWFSNRRAKWRREEK 354
V ++ QVWFSNRRAKWRREEK
Sbjct: 363 VAETRIQVWFSNRRAKWRREEK 384
>gi|30142096|gb|AAP13872.1| paired box 3 splice variant PAX3G [Homo sapiens]
Length = 403
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|327267057|ref|XP_003218319.1| PREDICTED: paired box protein Pax-3-like isoform 3 [Anolis
carolinensis]
Length = 485
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 17/96 (17%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G VTP + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+
Sbjct: 196 GPVTP-------QSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERA 238
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 239 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
>gi|338725619|ref|XP_001495229.2| PREDICTED: paired box protein Pax-3 isoform 3 [Equus caballus]
Length = 424
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 195 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 244
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 245 DIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 236 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
>gi|312381183|gb|EFR26989.1| hypothetical protein AND_06563 [Anopheles darlingi]
Length = 291
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
S+D +S+ + LKRK +R+RT+FT EQ+++LEK F+RT YPDV+ RE LA L EARI
Sbjct: 31 SSDTESEPGILLKRKQRRSRTTFTGEQLEALEKAFQRTQYPDVYTREELASSTNLTEARI 90
Query: 152 QVSSINRVLR 161
QV NR R
Sbjct: 91 QVWFSNRRAR 100
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 24/38 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K F+RT YPDV+ RE LA L EARIQV NR R
Sbjct: 63 KAFQRTQYPDVYTREELASSTNLTEARIQVWFSNRRAR 100
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 87 SEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
S+PNS + D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL
Sbjct: 55 SDPNSDCEADEYAP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGL 111
Query: 147 PEARIQVSSINR 158
EARIQV NR
Sbjct: 112 TEARIQVWFQNR 123
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 89 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 123
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPP 383
QVWF NRRAKWR++EK+ Q + S + T +PP
Sbjct: 117 QVWFQNRRAKWRKQEKVGPQSHPYNPYLPSGAASMQTVVGAALPP 161
>gi|70571090|dbj|BAE06677.1| transcription factor protein [Ciona intestinalis]
Length = 486
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R + E +S S + P +D D LK+KL+RNRT+FT Q+ LE+ FER+HYP
Sbjct: 198 RQPSNEDQSVSPPSISPTQCSDSD------LKKKLRRNRTTFTTFQLHELERAFERSHYP 251
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV++RE LA KI LPE R+QV NR
Sbjct: 252 DVYSREELAGKINLPEVRVQVWFQNR 277
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FER+HYPDV++RE LA KI LPE R+QV NR
Sbjct: 243 RAFERSHYPDVYSREELAGKINLPEVRVQVWFQNR 277
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G + + QVWF NRRAKWRR+EK+
Sbjct: 255 SREELAGKINLPEVRVQVWFQNRRAKWRRQEKI 287
>gi|190339194|gb|AAI63580.1| Pax7a protein [Danio rerio]
Length = 275
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 12/99 (12%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAA 165
ERTHYPD++ RE LA + L EAR+QV ++ LR L
Sbjct: 235 ERTHYPDIYTREELAQRTKLTEARVQVRYVH--LRYLQC 271
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAA 268
K FERTHYPD++ RE LA + L EAR+QV ++ LR L
Sbjct: 232 KAFERTHYPDIYTREELAQRTKLTEARVQVRYVH--LRYLQC 271
>gi|351698176|gb|EHB01095.1| Paired box protein Pax-3 [Heterocephalus glaber]
Length = 670
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 277 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 326
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 327 TREELAQRAKLTEARVQVWFSNRRAR 352
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 315 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 352
>gi|313220525|emb|CBY31375.1| unnamed protein product [Oikopleura dioica]
Length = 452
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 31/149 (20%)
Query: 83 SDINSEPNSSA--DEDSQMRLR----------LKRKLQRNRTSFTNEQIDSLEKEFERTH 130
SD NS NSS+ ED + ++ +KRK +R+RT+FT EQ++ LEK FERTH
Sbjct: 166 SDANSNHNSSSPIQEDEECPIKEDELDESGQPVKRKQRRSRTTFTAEQLEELEKCFERTH 225
Query: 131 YPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNG 190
YPD++ RE LA + L EAR+QV NR R ++Q +A +L M
Sbjct: 226 YPDIYTREELAQRTKLTEARVQVWFSNRRAR----WRKQVGAA----------QLPM--- 268
Query: 191 QPGWAWYPGSTPTPSPAHLALPHNPGSVT 219
PG A G P +P ++ LP PGS +
Sbjct: 269 -PGSASIHGYNPL-APTYMGLPDTPGSAS 295
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR R ++Q +A
Sbjct: 219 KCFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR----WRKQVGAA---------- 264
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVT 322
+L M PG A G P +P ++ LP PGS +
Sbjct: 265 QLPM----PGSASIHGYNPL-APTYMGLPDTPGSAS 295
>gi|402592915|gb|EJW86842.1| hypothetical protein WUBG_02247 [Wuchereria bancrofti]
Length = 184
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 38 FNGQ-PGWAWYPGSTPP--PSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSAD 94
F+G P AW P PP P P++ N I+ E + + +AD
Sbjct: 8 FSGAAPSTAW-PALLPPLQPIPSY-GFARNDTDFDCINARKFYEQHCCTYLTPHSGGAAD 65
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
+ R KRK +RNRT+F +Q++ LE F ++HYPDVFARE LA KI LPEAR+QV
Sbjct: 66 D------RSKRKQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELATKINLPEARVQVW 119
Query: 155 SINRVLRNLAAQKEQQASAH-NQTSETVYDKLRM 187
NR + +++ H N ETV +++
Sbjct: 120 FQNRRAKWRKTERDDHKLNHCNGQHETVVSNVQL 153
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH-NQTSETVYDK 287
F ++HYPDVFARE LA KI LPEAR+QV NR + +++ H N ETV
Sbjct: 91 FRKSHYPDVFAREELATKINLPEARVQVWFQNRRAKWRKTERDDHKLNHCNGQHETVVSN 150
Query: 288 LRM 290
+++
Sbjct: 151 VQL 153
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 87 SEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
S+PNS + D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL
Sbjct: 53 SDPNSDCEVDDYAP---KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGL 109
Query: 147 PEARIQVSSINR 158
EARIQV NR
Sbjct: 110 TEARIQVWFQNR 121
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 87 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 121
>gi|395528168|ref|XP_003766203.1| PREDICTED: paired box protein Pax-3 [Sarcophilus harrisii]
Length = 525
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 194 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 243
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 244 DIYTREELAQRAKLTEARVQVWFSNRRAR 272
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 235 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 272
>gi|393911231|gb|EJD76222.1| hypothetical protein LOAG_16789 [Loa loa]
Length = 242
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
+TS + SE N + ++ R R +K +RNRT+FT Q+ LE+ FER HYPDV+ARE L
Sbjct: 46 TTSPVVSETNQQHGDGNKRRDRESKKQRRNRTTFTTFQLHELEQAFERCHYPDVYARELL 105
Query: 141 ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW 196
A K+ LPE R+QV NR A+ +Q A + + G P WAW
Sbjct: 106 AQKVKLPEVRVQVWFQNR-----RAKWRRQDKAESSAIADLPPVRHSTPGIPSWAW 156
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
FER HYPDV+ARE LA K+ LPE R+QV NR A+ +Q A + +
Sbjct: 91 FERCHYPDVYARELLAQKVKLPEVRVQVWFQNR-----RAKWRRQDKAESSAIADLPPVR 145
Query: 289 RMFNGQPGWAW 299
G P WAW
Sbjct: 146 HSTPGIPSWAW 156
>gi|1840411|dbj|BAA12289.1| Pax-37 [Halocynthia roretzi]
Length = 704
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D DS+ L LKRK +R+RT+F+ +Q++ LE+ FERTHYPD++ RE LA + L EAR+Q
Sbjct: 179 SDCDSEPELPLKRKQRRSRTTFSADQLEELERCFERTHYPDIYTREELAQRTRLTEARVQ 238
Query: 153 VSSINRVLR---NLAAQK 167
V NR R +AAQ+
Sbjct: 239 VWFSNRRARWRKQMAAQQ 256
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 114 FTNEQIDSLEKEFERTHYPDVFA--------RERLADKIGLPEARIQVSSINRVLRNLAA 165
TN +I+S +++++ P +F+ +E L D+ P VS+I+R+LR+
Sbjct: 90 VTNSEIESKIEQYKKD-SPSMFSWEIRDQLIKEGLCDRSSAPT----VSAISRILRSKGC 144
Query: 166 QKEQQASAHNQTSETVYDKLRMFNGQPGWAWY-PGSTPTPSPAHLALPHNPG-SVTPISR 223
+++ + T D NG G G + S L L S T S
Sbjct: 145 DTSNESAEDPENGNTNSDTSS--NGATGEREADEGDSDCDSEPELPLKRKQRRSRTTFSA 202
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR---NLAAQK 270
D +E FERTHYPD++ RE LA + L EAR+QV NR R +AAQ+
Sbjct: 203 DQLEELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRARWRKQMAAQQ 256
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
IS ++ + E ++ + P S E KRK +R RT+FT+ Q++ LEK F RTH
Sbjct: 3 ISTEEVRAEEESNHPRAAPTSPESETEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTH 62
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDVF RE LA KIGL EARIQV NR
Sbjct: 63 YPDVFTREELAMKIGLTEARIQVWFQNR 90
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 56 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 90
>gi|7595811|gb|AAF64460.1|AF241310_1 transcription factor PaxB [Acropora millepora]
Length = 571
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 37/176 (21%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYD----KLRM-------------FNGQPGWA 45
VSSINR++RN E + A + E + D L++ NG G A
Sbjct: 124 VSSINRIVRNRINSSESKI-APGKADEVINDGHDGNLKVEPSSIHMPRSSYSINGILGMA 182
Query: 46 WYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEP---NSSADEDSQMRLR 102
P + PPS R + E ++ +SE + S LR
Sbjct: 183 AQPVISVPPS----------------KRKHSVESAESTGSHSEEEGHDGQVGAGSPTDLR 226
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+ ++R RT+F+ EQI+ LEK FE+THYPDVF RE+LA + L EARIQV NR
Sbjct: 227 GHKIVRRQRTTFSGEQIEQLEKTFEKTHYPDVFTREKLAQDVDLSEARIQVWFSNR 282
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FE+THYPDVF RE+LA + L EARIQV NR
Sbjct: 248 KTFEKTHYPDVFTREKLAQDVDLSEARIQVWFSNR 282
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWFSNRRAKWR++EK+ + S + TT P SPPP+ P+
Sbjct: 276 QVWFSNRRAKWRKQEKVPPLNSPTAASPAQSVPTTYINTATGYPTAVISPPPNQPTPVQD 335
Query: 399 GGFN 402
G +
Sbjct: 336 EGLS 339
>gi|117606393|ref|NP_001071090.1| paired [Tribolium castaneum]
gi|115498171|gb|ABD63009.2| paired [Tribolium castaneum]
Length = 414
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
+D + ++E SD +SEP + LKRK +R+RT+FT Q+D LEK FERT YP
Sbjct: 196 KDKSTDNEGVSDCDSEPG----------IPLKRKQRRSRTTFTAHQLDELEKAFERTQYP 245
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EARIQV NR R
Sbjct: 246 DIYTREELAQRTKLTEARIQVWFSNRRAR 274
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 237 KAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 274
>gi|350420704|ref|XP_003492596.1| PREDICTED: protein gooseberry-like [Bombus impatiens]
Length = 404
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 74 DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD + + S I +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YP
Sbjct: 153 DDPRRNHSIDGILGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYP 212
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 178
DV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 213 DVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 258
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 206 FHRTQYPDVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 258
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
IS ++ + E ++ + P S E KRK +R RT+FT+ Q++ LEK F RTH
Sbjct: 121 ISTEEVRTEEESNHPRAAPTSPESETEVDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTH 180
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDVF RE LA KIGL EARIQV NR
Sbjct: 181 YPDVFTREELAMKIGLTEARIQVWFQNR 208
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 174 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 208
>gi|170590608|ref|XP_001900064.1| Retinal homeobox protein Rx3 [Brugia malayi]
gi|158592696|gb|EDP31294.1| Retinal homeobox protein Rx3, putative [Brugia malayi]
Length = 185
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 12/154 (7%)
Query: 38 FNGQ-PGWAWYPGSTPP--PSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSAD 94
F+G P AW P PP P P++ N I+ E + + +AD
Sbjct: 8 FSGAAPSTAW-PTLLPPLQPIPSY-GFTRNDTGFDCINARKVYEQHCCTYLTPHSGGAAD 65
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
+ R KRK +RNRT+F +Q++ LE F ++HYPDVFARE LA KI LPEAR+QV
Sbjct: 66 D------RSKRKQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELAVKINLPEARVQVW 119
Query: 155 SINRVLRNLAAQKEQQASAH-NQTSETVYDKLRM 187
NR + +++ Q H + ETV +++
Sbjct: 120 FQNRRAKWRKTERDDQKLNHCDGQHETVVSNVQL 153
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH-NQTSETVYDK 287
F ++HYPDVFARE LA KI LPEAR+QV NR + +++ Q H + ETV
Sbjct: 91 FRKSHYPDVFAREELAVKINLPEARVQVWFQNRRAKWRKTERDDQKLNHCDGQHETVVSN 150
Query: 288 LRM 290
+++
Sbjct: 151 VQL 153
>gi|114107892|gb|AAI23264.1| LOC496377 protein [Xenopus laevis]
Length = 268
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 10/77 (12%)
Query: 78 EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
E E SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++ R
Sbjct: 200 ESEEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTR 249
Query: 138 ERLADKIGLPEARIQVS 154
E LA + L EAR+QV+
Sbjct: 250 EELAQRAKLTEARVQVA 266
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVS 257
FERTHYPD++ RE LA + L EAR+QV+
Sbjct: 238 FERTHYPDIYTREELAQRAKLTEARVQVA 266
>gi|350596588|ref|XP_003361395.2| PREDICTED: paired box protein Pax-3 [Sus scrofa]
Length = 509
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 10/84 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 224 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 273
Query: 133 DVFARERLADKIGLPEARIQVSSI 156
D++ RE LA + L EAR+Q+ +
Sbjct: 274 DIYTREELAQRAKLTEARVQIQLV 297
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
+ FERTHYPD++ RE LA + L EAR+Q+ +
Sbjct: 265 RAFERTHYPDIYTREELAQRAKLTEARVQIQLV 297
>gi|380027472|ref|XP_003697447.1| PREDICTED: protein gooseberry-like [Apis florea]
Length = 405
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 74 DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD + + S I +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YP
Sbjct: 154 DDPRRNHSIDGILGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYP 213
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 178
DV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 214 DVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 259
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 207 FHRTQYPDVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 259
>gi|186680512|gb|ACC86107.1| paired box protein 7 transcript variant 1 [Sternopygus macrurus]
Length = 300
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 10/87 (11%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 190 SIDGILGDKGHRTDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQV 153
ERTHYPD++ RE LA + L EAR+QV
Sbjct: 240 ERTHYPDIYTREELAQRTKLTEARVQV 266
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
K FERTHYPD++ RE LA + L EAR+QV
Sbjct: 237 KAFERTHYPDIYTREELAQRTKLTEARVQV 266
>gi|345314187|ref|XP_003429473.1| PREDICTED: paired box protein Pax-7-like, partial [Ornithorhynchus
anatinus]
Length = 84
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 10/74 (13%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 8 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 57
Query: 143 KIGLPEARIQVSSI 156
+ L EAR+QV +
Sbjct: 58 RTKLTEARVQVGGM 71
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
K FERTHYPD++ RE LA + L EAR+QV +
Sbjct: 39 KAFERTHYPDIYTREELAQRTKLTEARVQVGGM 71
>gi|328778292|ref|XP_394847.4| PREDICTED: protein gooseberry-like [Apis mellifera]
Length = 426
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 74 DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD + + S I +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YP
Sbjct: 175 DDPRRNHSIDGILGGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYP 234
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 178
DV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 235 DVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 280
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 228 FHRTQYPDVYTREELAQKTNLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 280
>gi|405977363|gb|EKC41820.1| Paired box protein Pax-7 [Crassostrea gigas]
Length = 466
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 12/111 (10%)
Query: 67 SVTPISRDDAKE--HESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEK 124
S+ + DD E + SD +SEP L +KRK +R+RT+FT EQ++ LE+
Sbjct: 201 SIDGLLADDKSEKSEDEESDCDSEPG----------LSVKRKQRRSRTTFTAEQLEELER 250
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
FERTHYPD++ RE LA + L EAR+QV NR R Q SA N
Sbjct: 251 AFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQMGSNQISALN 301
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ FERTHYPD++ RE LA + L EAR+QV NR R Q SA N
Sbjct: 250 RAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQMGSNQISALN 301
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 47/70 (67%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P SAD D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL E
Sbjct: 108 PPGSADSDDPDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTE 167
Query: 149 ARIQVSSINR 158
ARIQV NR
Sbjct: 168 ARIQVWFQNR 177
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 143 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 177
>gi|255689730|gb|ACU30148.1| paired box 3 [Monodelphis domestica]
Length = 319
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYP
Sbjct: 165 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYP 214
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 215 DIYTREELAQRAKLTEARVQVWFSNRRAR 243
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 206 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 243
>gi|170056868|ref|XP_001864227.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876514|gb|EDS39897.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 345
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 85 INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
I + S+D +S+ ++LKRK +R+RT+F+ EQ+++LEK F+RT YPDV+ RE LA
Sbjct: 45 IRCRGSDSSDIESEPGIQLKRKQRRSRTTFSGEQLEALEKAFQRTQYPDVYTREELASNT 104
Query: 145 GLPEARIQVSSINRVLR 161
L EARIQV NR R
Sbjct: 105 NLTEARIQVWFSNRRAR 121
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 24/38 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K F+RT YPDV+ RE LA L EARIQV NR R
Sbjct: 84 KAFQRTQYPDVYTREELASNTNLTEARIQVWFSNRRAR 121
>gi|144369326|dbj|BAF56221.1| Pax-C [Anthopleura japonica]
Length = 462
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Query: 71 ISRDDAKEHESTS--DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFER 128
I DDA ++S S D++S+ +D Q KRKL+RNRT+F+ +Q++ LEKEFE+
Sbjct: 283 IKVDDASTNDSVSVHDVSSDDERIKTDDIQASQ--KRKLRRNRTTFSPDQLEMLEKEFEK 340
Query: 129 THYPDVFARERLADKIGLPEARIQVSSINR 158
+HYPDV RE LA+KI + EAR+QV NR
Sbjct: 341 SHYPDVATREDLANKIDMSEARVQVWFSNR 370
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE++HYPDV RE LA+KI + EAR+QV NR
Sbjct: 336 KEFEKSHYPDVATREDLANKIDMSEARVQVWFSNR 370
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 325 SRDDAKGLVQQS-AR-QVWFSNRRAKWRREEKLRN 357
+R+D + S AR QVWFSNRRAKWRR +K+ N
Sbjct: 348 TREDLANKIDMSEARVQVWFSNRRAKWRRHQKIAN 382
>gi|332017592|gb|EGI58292.1| Protein gooseberry-neuro [Acromyrmex echinatior]
Length = 302
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D +S+ L+LKRK +R+RT+FT+EQ++ LE F+R YPDV++RE LA + GL EARIQ
Sbjct: 30 SDTESEPGLQLKRKQRRSRTTFTSEQLEQLEAAFQRAQYPDVYSREELAQRTGLTEARIQ 89
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 90 VWFSNRRAR 98
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV++RE LA + GL EARIQV NR R
Sbjct: 63 FQRAQYPDVYSREELAQRTGLTEARIQVWFSNRRAR 98
>gi|124054602|gb|ABM89502.1| Pax3 [Scyliorhinus canicula]
Length = 319
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I + A + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 95 SIDGILANKANNSDEASDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAF 144
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
RTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 145 GRTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 179
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ F RTHYPD++ RE LA + L EAR+QV NR A+ +QA A +
Sbjct: 142 RAFGRTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA---------N 187
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQS 336
+L FN + P + P SP L+ P + P + D V +S
Sbjct: 188 QLLAFNHLIPGGFPPTAMPALSPYQLSDASYPPTSIPQAISDPSNTVHRS 237
>gi|41581185|emb|CAF02092.1| paired box protein 7 [Salmo salar]
Length = 501
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 58/101 (57%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
+ K S I + + D +S+ L LKRK +R+RT+FT EQ++ LEK FERT YPD+
Sbjct: 184 EKKTKHSIDGILGDKDEGLDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTRYPDI 243
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+ RE LA + L EAR+QV NR R Q +A N
Sbjct: 244 YTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFN 284
>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
Length = 516
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
+S +D DS+ ++LKRK +R+RT+FT Q+D LE+ FERT YPD++ RE LA + L EA
Sbjct: 197 SSGSDCDSEPGIQLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTRLSEA 256
Query: 150 RIQVSSINRVLR 161
RIQV NR R
Sbjct: 257 RIQVWFSNRRAR 268
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 231 RAFERTQYPDIYTREELAQRTRLSEARIQVWFSNRRAR 268
>gi|357608260|gb|EHJ65894.1| gooseberry [Danaus plexippus]
Length = 471
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 11/123 (8%)
Query: 67 SVTPISR---------DDAKEHESTSDINSEPNSSADEDSQMR--LRLKRKLQRNRTSFT 115
SV+ ISR D + + S I +S D D++ + LKRK +R+RT+F+
Sbjct: 134 SVSSISRLIRGGKRDESDPRRNHSIDGILGPSSSCEDSDTESEPGITLKRKQRRSRTTFS 193
Query: 116 NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+Q+++LE+ F RT YPDV+ RE LA K L EAR+QV NR R QQ SA N
Sbjct: 194 GDQLEALERAFTRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLSAFN 253
Query: 176 QTS 178
S
Sbjct: 254 TMS 256
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 30/55 (54%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ F RT YPDV+ RE LA K L EAR+QV NR R QQ SA N S
Sbjct: 202 RAFTRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLSAFNTMS 256
>gi|380021136|ref|XP_003694430.1| PREDICTED: uncharacterized protein LOC100866617 [Apis florea]
Length = 388
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
+S +D DS+ + LKRK +R+RT+FT Q+D LE+ FERT YPD++ RE LA + L EA
Sbjct: 57 SSGSDCDSEPGIPLKRKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTKLTEA 116
Query: 150 RIQVSSINRVLR 161
RIQV NR R
Sbjct: 117 RIQVWFSNRRAR 128
>gi|348539021|ref|XP_003456988.1| PREDICTED: paired box protein Pax-3-like [Oreochromis niloticus]
Length = 554
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + S++ SEP+ L LKRK +R+RT+FT EQ++ LE+ F
Sbjct: 190 SIEGILGDRSSHSDEGSEVESEPD----------LPLKRKQRRSRTTFTAEQLEELERAF 239
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 240 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
>gi|332017590|gb|EGI58290.1| Protein gooseberry-neuro [Acromyrmex echinatior]
Length = 398
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 74 DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD + + S I +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YP
Sbjct: 147 DDLRRNHSIDGILAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYP 206
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
DV+ RE LA K L EAR+QV NR R QQ +A N +
Sbjct: 207 DVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNMS 251
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 280
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N +
Sbjct: 200 FHRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNMS 251
>gi|26377023|dbj|BAB28278.2| unnamed protein product [Mus musculus]
Length = 488
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 10/89 (11%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
R A + + SDI+SEP+ L LKRK + +RT+FT EQ++ LE+ FERTHYP
Sbjct: 199 RASAPQSDEGSDIDSEPD----------LPLKRKQRGSRTTFTAEQLEELERAFERTHYP 248
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
D++ RE LA + L EAR+QV NR R
Sbjct: 249 DIYTREELAQRAKLTEARVQVWFSNRRAR 277
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRN-LAAQKEQQASAHNQTSETVYDKLR----- 186
D ++ + D+ +P VSSI+R+LR+ +E++A + +E K +
Sbjct: 139 DKLLKDAVCDRNTVPS----VSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDG 194
Query: 187 MFNGQPGWAWYPGSTPTPSPAHLALPHNP-GSVTPISRDDAKE----FERTHYPDVFARE 241
+ + + + S L L GS T + + +E FERTHYPD++ RE
Sbjct: 195 ILSERASAPQSDEGSDIDSEPDLPLKRKQRGSRTTFTAEQLEELERAFERTHYPDIYTRE 254
Query: 242 RLADKIGLPEARIQVSSINRVLR 264
LA + L EAR+QV NR R
Sbjct: 255 ELAQRAKLTEARVQVWFSNRRAR 277
>gi|350593920|ref|XP_003359706.2| PREDICTED: paired box protein Pax-3-like, partial [Sus scrofa]
Length = 136
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 2 APQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIY 51
Query: 136 ARERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 52 TREELAQRAKLTEARVQVWFSNRRAR 77
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 40 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 77
>gi|119393903|gb|ABL74454.1| Pax 3/7B [Helobdella sp. MS-2000]
Length = 444
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
++L RK +RNRT+FT++Q++ LEK FERTHYPDV+ RE LA K G EARIQV NR
Sbjct: 379 MKLSRKQRRNRTTFTSDQLELLEKSFERTHYPDVYTREDLAAKTGFTEARIQVWFSNRRA 438
Query: 161 R 161
R
Sbjct: 439 R 439
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERTHYPDV+ RE LA K G EARIQV NR R
Sbjct: 402 KSFERTHYPDVYTREDLAAKTGFTEARIQVWFSNRRAR 439
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 67 VSDGNS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 120 MKIGLTEARIQVWFQNR 136
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 102 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
>gi|340378028|ref|XP_003387530.1| PREDICTED: retinal homeobox protein Rx-A-like [Amphimedon
queenslandica]
Length = 296
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D A E + S I+ + ++S + + + + K +RNRT+FT Q+D LE F +THY
Sbjct: 43 SCDSAAESDKDSIISDDYSTSPVQSPKGSVNIIMKSKRNRTTFTAHQLDELEMIFRQTHY 102
Query: 132 PDVFARERLADKIGLPEARIQVSSINR 158
PDV RE+LA +IGLPE+R+QV NR
Sbjct: 103 PDVLLREKLAQRIGLPESRVQVWFQNR 129
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDV RE+LA +IGLPE+R+QV NR
Sbjct: 97 FRQTHYPDVLLREKLAQRIGLPESRVQVWFQNR 129
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 335 QSARQVWFSNRRAKWRREEKL 355
+S QVWF NRRAKWR+ EKL
Sbjct: 119 ESRVQVWFQNRRAKWRKREKL 139
>gi|307189640|gb|EFN73978.1| Protein gooseberry-neuro [Camponotus floridanus]
Length = 321
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D +S+ + LKRK +R+RT+FT EQ++ LE F+R YPDV+ARE LA + GL EARIQ
Sbjct: 49 SDTESEPGIPLKRKQRRSRTTFTGEQLEQLETAFQRAQYPDVYAREELAQRTGLTEARIQ 108
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 109 VWFSNRRAR 117
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 82 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 117
>gi|391327510|ref|XP_003738241.1| PREDICTED: paired box protein Pax-7-like [Metaseiulus occidentalis]
Length = 665
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
SV+ ISR + E D NS +S D ++ + LKRK +R+RT+FT +Q+D LEK F
Sbjct: 317 SVSSISRL-LRGREMEIDENS-VSSDGGGDGEVGITLKRKQRRSRTTFTAQQLDELEKAF 374
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERT YPDV+ RE L + L EAR+QV NR R
Sbjct: 375 ERTQYPDVYTREELGQRTRLTEARVQVWFSNRRAR 409
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 24/38 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K FERT YPDV+ RE L + L EAR+QV NR R
Sbjct: 372 KAFERTQYPDVYTREELGQRTRLTEARVQVWFSNRRAR 409
>gi|109149547|ref|XP_001112939.1| PREDICTED: short stature homeobox protein-like, partial [Macaca
mulatta]
Length = 213
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 25/122 (20%)
Query: 39 NGQPG--WAWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADED 96
G PG W PG +P PS H + + E D+ SE DED
Sbjct: 72 GGDPGSLWRGAPGLSPVPSARHAGI--------------YECKEKREDVKSE-----DED 112
Query: 97 SQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV
Sbjct: 113 GQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQ 168
Query: 157 NR 158
NR
Sbjct: 169 NR 170
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 26/99 (26%)
Query: 189 NGQPG--WAWYPGSTPTPSPAHLALPHNPGSVTPISRDD--------------------- 225
G PG W PG +P PS H + + +D
Sbjct: 72 GGDPGSLWRGAPGLSPVPSARHAGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQL 131
Query: 226 ---AKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 132 NELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 170
>gi|156377156|ref|XP_001630723.1| predicted protein [Nematostella vectensis]
gi|156217749|gb|EDO38660.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 75 DAKEHESTSDINSEPNSSADE---DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
D + + SD N+ S+ DE D KRKL+RNRT+FT +Q++ LEKEFE++HY
Sbjct: 294 DRMDEAADSDTNANDASTDDERGKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEFEKSHY 353
Query: 132 PDVFARERLADKIGLPEARIQVSSINR 158
PDV RE LA+KI + EAR+QV NR
Sbjct: 354 PDVATREELANKIDMSEARVQVWFSNR 380
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE++HYPDV RE LA+KI + EAR+QV NR
Sbjct: 346 KEFEKSHYPDVATREELANKIDMSEARVQVWFSNR 380
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 110/287 (38%), Gaps = 78/287 (27%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D E + D+ P VSSINR+LRN AA++ Q + + + L G
Sbjct: 122 DRLVEEGICDRDNTP----SVSSINRILRNKAAERAAQFAMLERERQ----HLASLYGLH 173
Query: 193 GWAWYPGSTPTPSPAHLALP-HNPGSVTPISRDDA---KEFERTHYPDVFARERLADKIG 248
W P + P P + GS +P S + +E +R D++ ER+A G
Sbjct: 174 PWGAVPDT-----PMQWGYPSFHHGSSSPTSEERMALQQELDRKILADIYNEERMAKSPG 228
Query: 249 LPEARIQVS--------SINRVLRNLAAQKEQQAS---------------AHNQ-----T 280
++ + S R +R+L ++E+ S +H Q T
Sbjct: 229 YDHEDVKEAHKLREDDLSPEREMRDLHREREETESITSHTEERSTIEDTDSHRQYEPRIT 288
Query: 281 SETVYDKLRM------------FNGQPGWAWYPGST---------PTPSPAHLAL----- 314
E V D++ + + G P + T +P L +
Sbjct: 289 HEEVRDRMDEAADSDTNANDASTDDERGKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEF 348
Query: 315 --PHNPGSVTPISRDDAKGLVQQS-AR-QVWFSNRRAKWRREEKLRN 357
H P T R++ + S AR QVWFSNRRAKWRR +K+ N
Sbjct: 349 EKSHYPDVAT---REELANKIDMSEARVQVWFSNRRAKWRRHQKINN 392
>gi|328782878|ref|XP_003250208.1| PREDICTED: paired box protein Pax-3-B [Apis mellifera]
Length = 531
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 67 SVTPISR----DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
SV+ ISR D ++ D + +S +D DS+ + LKRK +R+RT+FT Q+D L
Sbjct: 175 SVSAISRLLRGRDPEDEAKLGD--GKTSSGSDCDSEPGIPLKRKQRRSRTTFTAHQLDEL 232
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
E+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 233 ERAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 271
>gi|328713660|ref|XP_001942974.2| PREDICTED: protein gooseberry-like [Acyrthosiphon pisum]
Length = 440
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
RD+ K H + +D +S+ LKRK +R+RT+FT EQ++ LE+ F ++ YP
Sbjct: 148 RDELKNHSIDGILGPSSADDSDTESEPGFHLKRKQRRSRTTFTGEQLEDLERAFHKSQYP 207
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLR 161
DV+ RE LA K L EAR+QV NR R
Sbjct: 208 DVYTREELAQKTKLTEARVQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 224 DDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
D + F ++ YPDV+ RE LA K L EAR+QV NR R
Sbjct: 196 DLERAFHKSQYPDVYTREELAQKTKLTEARVQVWFSNRRAR 236
>gi|56785872|gb|AAW29068.1| homeodomain transcription factor PaxC [Nematostella vectensis]
Length = 458
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 75 DAKEHESTSDINSEPNSSADE---DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
D + + SD N+ S+ DE D KRKL+RNRT+FT +Q++ LEKEFE++HY
Sbjct: 285 DRMDEAADSDANANDASTDDERGKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEFEKSHY 344
Query: 132 PDVFARERLADKIGLPEARIQVSSINR 158
PDV RE LA+KI + EAR+QV NR
Sbjct: 345 PDVATREELANKIDMSEARVQVWFSNR 371
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE++HYPDV RE LA+KI + EAR+QV NR
Sbjct: 337 KEFEKSHYPDVATREELANKIDMSEARVQVWFSNR 371
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 110/287 (38%), Gaps = 78/287 (27%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D E + D+ P VSSINR+LRN AA++ Q + + + L G
Sbjct: 113 DRLVEEGICDRDNTP----SVSSINRILRNKAAERAAQFAMLERERQ----HLASLYGLH 164
Query: 193 GWAWYPGSTPTPSPAHLALP-HNPGSVTPISRDDA---KEFERTHYPDVFARERLADKIG 248
W P + P P + GS +P S + +E +R D++ ER+A G
Sbjct: 165 PWGAVPDT-----PMQWGYPSFHHGSSSPTSEERMALQQELDRKILADIYNEERMAKSPG 219
Query: 249 LPEARIQVS--------SINRVLRNLAAQKEQQAS---------------AHNQ-----T 280
++ + S R +R+L ++E+ S +H Q T
Sbjct: 220 YDHEDVKEAHKLREDDLSPEREMRDLHREREEAESITSHTEERSTIEDTDSHRQYEPRIT 279
Query: 281 SETVYDKLRM------------FNGQPGWAWYPGST---------PTPSPAHLAL----- 314
E V D++ + + G P + T +P L +
Sbjct: 280 HEEVRDRMDEAADSDANANDASTDDERGKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEF 339
Query: 315 --PHNPGSVTPISRDDAKGLVQQS-AR-QVWFSNRRAKWRREEKLRN 357
H P T R++ + S AR QVWFSNRRAKWRR +K+ N
Sbjct: 340 EKSHYPDVAT---REELANKIDMSEARVQVWFSNRRAKWRRHQKINN 383
>gi|47224832|emb|CAG06402.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
S S + +D +S+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA
Sbjct: 235 VSTAASHSDEGSDFESEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELA 294
Query: 142 DKIGLPEARIQVSSINRVLR 161
+ L EAR+QV NR R
Sbjct: 295 QRAKLTEARVQVWFSNRRAR 314
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 277 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 314
>gi|322800798|gb|EFZ21674.1| hypothetical protein SINV_07081 [Solenopsis invicta]
Length = 405
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 74 DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD + + S I +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YP
Sbjct: 154 DDLRRNHSIDGILAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYP 213
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
DV+ RE LA K L EAR+QV NR R QQ +A N +
Sbjct: 214 DVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNMS 258
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 280
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N +
Sbjct: 207 FHRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNMS 258
>gi|91089659|ref|XP_974185.1| PREDICTED: similar to gooseberry-neuro CG2692-PA [Tribolium
castaneum]
gi|270012692|gb|EFA09140.1| gooseberry-neuro [Tribolium castaneum]
Length = 338
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 7/116 (6%)
Query: 49 GSTPPPSPAHLALPHNPGSVTPISRD---DAKEHESTSDINSEPNSSADEDSQMRLRLKR 105
G T PPS + ++ G RD D K+ + I +D +S+ + LKR
Sbjct: 120 GVTDPPSVSSISRLLRGGG----RRDGDPDGKKDYTIDGILGGREEESDTESEPGIPLKR 175
Query: 106 KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
K +R+RT+F+ EQ+++LE+ F RT YPDV+ RE LA + GL EARIQV NR R
Sbjct: 176 KQRRSRTTFSGEQLEALERAFSRTQYPDVYTREELAQQTGLTEARIQVWFSNRRAR 231
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA + GL EARIQV NR R
Sbjct: 194 RAFSRTQYPDVYTREELAQQTGLTEARIQVWFSNRRAR 231
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 65 ISDANS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 117
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 118 MKIGLTEARIQVWFQNR 134
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 100 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 134
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 65 ISDANS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 117
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 118 MKIGLTEARIQVWFQNR 134
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 100 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 134
>gi|194756346|ref|XP_001960440.1| GF13361 [Drosophila ananassae]
gi|190621738|gb|EDV37262.1| GF13361 [Drosophila ananassae]
Length = 427
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+QV NR
Sbjct: 181 VQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRA 240
Query: 161 R 161
R
Sbjct: 241 R 241
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 190 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 241
>gi|194756342|ref|XP_001960438.1| GF11512 [Drosophila ananassae]
gi|190621736|gb|EDV37260.1| GF11512 [Drosophila ananassae]
Length = 458
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 29 ETVYDKLRMFNGQPG-WAW-------YPGSTPPPSPAHLA--LPHNPGSVTPISRDDAKE 78
ET D+LR N PG ++W G PPS + ++ L N S S D K+
Sbjct: 100 ETRIDELRKEN--PGIFSWEIREKLIKEGFADPPSTSSISRLLRGNDRS----SEDGRKD 153
Query: 79 HESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARE 138
+ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT YPDV+ RE
Sbjct: 154 YTIHGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFARTQYPDVYTRE 213
Query: 139 RLADKIGLPEARIQVSSINRVLR 161
LA GL EARIQV NR R
Sbjct: 214 ELAQTTGLTEARIQVWFSNRRAR 236
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 24/38 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA GL EARIQV NR R
Sbjct: 199 RAFARTQYPDVYTREELAQTTGLTEARIQVWFSNRRAR 236
>gi|358337749|dbj|GAA56083.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 529
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 77 KEHE---STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
K+HE T D S P+ + D R K K +RNRT+FT+ Q++ +E+ F++THYPD
Sbjct: 104 KKHEPTYMTHDSGSIPDEQQNCD-----RDKLKKRRNRTTFTSFQLNEMERIFQKTHYPD 158
Query: 134 VFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 191
V+ARE+LA + GL EAR+QV NR R ++E+ + HN S+ + FNG+
Sbjct: 159 VYAREQLAMRTGLTEARVQVWFQNR--RAKWRKRERFGTGHNGLSDGFVSAM-TFNGE 213
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F++THYPDV+ARE+LA + GL EAR+QV NR R ++E+ + HN S+ +
Sbjct: 151 FQKTHYPDVYAREQLAMRTGLTEARVQVWFQNR--RAKWRKRERFGTGHNGLSDGFVSAM 208
Query: 289 RMFNGQ 294
FNG+
Sbjct: 209 -TFNGE 213
>gi|195430054|ref|XP_002063072.1| GK21576 [Drosophila willistoni]
gi|194159157|gb|EDW74058.1| GK21576 [Drosophila willistoni]
Length = 439
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+QV NR
Sbjct: 181 VQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRA 240
Query: 161 RNLAAQKEQQASAHNQTSET 180
R QQ + TS +
Sbjct: 241 RLRKQLNTQQVPSFAATSSS 260
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R Q
Sbjct: 190 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRARLRKQLNTQ 249
Query: 273 QASAHNQTSET 283
Q + TS +
Sbjct: 250 QVPSFAATSSS 260
>gi|307212050|gb|EFN87933.1| Protein gooseberry-neuro [Harpegnathos saltator]
Length = 438
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 12/124 (9%)
Query: 67 SVTPISR-----------DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSF 114
SV+ ISR DD + + S I +D +S+ + LKRK +R+RT+F
Sbjct: 113 SVSSISRLLRGPANQTRPDDPRRNHSIDGILAGSSGDDSDTESEPGIALKRKQRRSRTTF 172
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 174
T EQ++ LE F RT YPDV+ RE LA K L EAR+QV NR R QQ +A
Sbjct: 173 TGEQLEQLEAAFHRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAF 232
Query: 175 NQTS 178
N S
Sbjct: 233 NTMS 236
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 29/53 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 184 FHRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFNTMS 236
>gi|84874540|gb|ABC68267.1| transcription factor Pax3/7 [Capitella teleta]
Length = 416
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 68/113 (60%), Gaps = 9/113 (7%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
L L RK +R+RT+F+ +Q++ LEK F+RTHYPD++ RE LA + GL EAR+QV NR
Sbjct: 183 LSLSRKQRRSRTTFSADQLEHLEKAFDRTHYPDIYTREELAQRSGLTEARVQVWFSNRRA 242
Query: 161 RNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPH 213
R ++Q S +S ++ L + G++ P TP+ + H ALPH
Sbjct: 243 R----WRKQMGSGQLASS---FNSL--LSAASGYSSTPSYTPSLNQDHPALPH 286
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K F+RTHYPD++ RE LA + GL EAR+QV NR R ++Q S +S ++
Sbjct: 206 KAFDRTHYPDIYTREELAQRSGLTEARVQVWFSNRRAR----WRKQMGSGQLASS---FN 258
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPH 316
L + G++ P TP+ + H ALPH
Sbjct: 259 SL--LSAASGYSSTPSYTPSLNQDHPALPH 286
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 67 VSDGNS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 120 MKIGLTEARIQVWFQNR 136
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 102 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPP 383
QVWF NRRAKWR++EK+ Q + S T T +PP
Sbjct: 130 QVWFQNRRAKWRKQEKVGPQSHPYNPYLPSGAATMQTVVGAALPP 174
>gi|242015336|ref|XP_002428315.1| protein gooseberry, putative [Pediculus humanus corporis]
gi|212512911|gb|EEB15577.1| protein gooseberry, putative [Pediculus humanus corporis]
Length = 390
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
LKRK +R+RT+FT EQ++ LE+ F+RT YPDV+ RE LA K L EAR+QV NR R
Sbjct: 182 LKRKQRRSRTTFTGEQLEELERAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARL 241
Query: 163 LAAQKEQQASAHNQTS 178
QQ +A N S
Sbjct: 242 RKQMNSQQLNAFNSMS 257
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ F+RT YPDV+ RE LA K L EAR+QV NR R QQ +A N S
Sbjct: 203 RAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQMNSQQLNAFNSMS 257
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 67 VSDGNS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 120 MKIGLTEARIQVWFQNR 136
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 102 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 67 VSDGNS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 120 MKIGLTEARIQVWFQNR 136
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 102 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
>gi|313227120|emb|CBY22267.1| unnamed protein product [Oikopleura dioica]
Length = 487
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 19/117 (16%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
+KRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 233 VKRKQRRSRTTFTAEQLEELEKCFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR- 291
Query: 163 LAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVT 219
++Q +A +L M PG A G P +P ++ LP PGS +
Sbjct: 292 ---WRKQVGAA----------QLPM----PGSASIHGYNPL-APTYMGLPDTPGSAS 330
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD++ RE LA + L EAR+QV NR R ++Q +A
Sbjct: 254 KCFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRAR----WRKQVGAA---------- 299
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVT 322
+L M PG A G P +P ++ LP PGS +
Sbjct: 300 QLPM----PGSASIHGYNPL-APTYMGLPDTPGSAS 330
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 67 VSDGNS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 120 MKIGLTEARIQVWFQNR 136
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 102 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPP 383
QVWF NRRAKWR++EK+ Q + S T T +PP
Sbjct: 130 QVWFQNRRAKWRKQEKVGPQSHPYNPYLPSGAATMQTVVGAALPP 174
>gi|47203313|emb|CAF94225.1| unnamed protein product [Tetraodon nigroviridis]
Length = 69
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 10/71 (14%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD++SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 8 SDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 57
Query: 143 KIGLPEARIQV 153
+ L EAR+QV
Sbjct: 58 RTKLTEARVQV 68
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
K FERTHYPD++ RE LA + L EAR+QV
Sbjct: 39 KAFERTHYPDIYTREELAQRTKLTEARVQV 68
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 89 PNSSADEDSQM-RLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
P S A+ D + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL
Sbjct: 50 PISDANSDCETDEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLT 109
Query: 148 EARIQVSSINR 158
EARIQV NR
Sbjct: 110 EARIQVWFQNR 120
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 86 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 120
>gi|170034217|ref|XP_001844971.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167875483|gb|EDS38866.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 382
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ--------PGWAWYPGSTPPP 54
VSSINR+LRN AA++ A PG + PG TPP
Sbjct: 27 VSSINRILRNRAAERAAAEFARAAGYGLYPPPPYGGFPWPAPAHLWPPGQSGMPGMTPPG 86
Query: 55 S-----PAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQR 109
S PA + P + T S D ++ DI E ++S D D + K +R
Sbjct: 87 SSSNSTPATIGSPGSGSHDTLGSPDGSR----LIDIEGEDSNSLDGD-------QPKFRR 135
Query: 110 NRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
NRT+F+ EQ++ LEKEF+++HYP V RERLA + L EAR+QV NR
Sbjct: 136 NRTTFSPEQLEELEKEFDKSHYPCVSTRERLASRTSLSEARVQVWFSNR 184
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEF+++HYP V RERLA + L EAR+QV NR
Sbjct: 150 KEFDKSHYPCVSTRERLASRTSLSEARVQVWFSNR 184
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/17 (76%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWFSNRRAKWRR +++
Sbjct: 178 QVWFSNRRAKWRRHQRM 194
>gi|307189638|gb|EFN73976.1| Protein gooseberry [Camponotus floridanus]
Length = 574
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 74 DDAKEHESTSDI-NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
DD + + S I +D +S+ + LKRK +R+RT+FT EQ++ LE F RT YP
Sbjct: 154 DDPRRNHSIDGILAGSSGDDSDTESEPGIALKRKQRRSRTTFTGEQLEQLEAAFHRTQYP 213
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
DV+ RE LA K L EAR+QV NR R QQ +A N
Sbjct: 214 DVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFN 256
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 28/50 (56%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
F RT YPDV+ RE LA K L EAR+QV NR R QQ +A N
Sbjct: 207 FHRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKQLNSQQLNAFN 256
>gi|321474441|gb|EFX85406.1| hypothetical protein DAPPUDRAFT_45999 [Daphnia pulex]
Length = 250
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 67 SVTPISRDDAKEHESTSDINSEPN-------SSADEDSQMRLRLKRKLQRNRTSFTNEQI 119
SV+ ISR + E+ + E + +D DS+ L LK+K +R+RT+FT +Q+
Sbjct: 137 SVSAISRLMKGKDEAAETVKMEKGHNDMDAGTGSDCDSEPGLSLKQKQRRHRTTFTAQQM 196
Query: 120 DSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
D LEK F+RT YPDV+ RE LA + L EARIQV NR
Sbjct: 197 DELEKAFDRTQYPDVYTREELAQRTKLTEARIQVWFSNR 235
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RT YPDV+ RE LA + L EARIQV NR
Sbjct: 201 KAFDRTQYPDVYTREELAQRTKLTEARIQVWFSNR 235
>gi|322800793|gb|EFZ21669.1| hypothetical protein SINV_02847 [Solenopsis invicta]
Length = 299
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D +S+ + LKRK +R+RT+F+ EQ++ LE F+R YPDV+ARE LA + GL EARIQ
Sbjct: 18 SDTESEPGIPLKRKQRRSRTTFSGEQLEMLETAFQRAQYPDVYAREELAQRTGLTEARIQ 77
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 78 VWFSNRRAR 86
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
F+R YPDV+ARE LA + GL EARIQV NR R
Sbjct: 51 FQRAQYPDVYAREELAQRTGLTEARIQVWFSNRRAR 86
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 73 VSDGNS--DCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 125
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 126 MKIGLTEARIQVWFQNR 142
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 108 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 142
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPP 383
QVWF NRRAKWR++EK+ Q + S T T +PP
Sbjct: 136 QVWFQNRRAKWRKQEKVGPQSHPYNPYLPSGAATMQTVVGAALPP 180
>gi|379692648|gb|AFD10414.1| Pax3, partial [Capra hircus]
Length = 142
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 10/79 (12%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SDI+SEP+ L+RK +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA
Sbjct: 1 SDIDSEPD----------FVLRRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQ 50
Query: 143 KIGLPEARIQVSSINRVLR 161
+ L EAR+QV NR R
Sbjct: 51 RAKLTEARVQVWFSNRRAR 69
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 32 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 69
>gi|736381|gb|AAA64491.1| Pax7 [Mus musculus]
Length = 290
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + S + SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 151 SIDGILGDKGNRLDEGSGVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 200
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
ERTHYPD++ RE LA + L EAR QV NR R Q +A N
Sbjct: 201 ERTHYPDIYTREELAQRTKLTEARFQVWFSNRRARWRKQAGANQLAAFN 249
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSE---TVYDKLRMFNGQPGWAWYPGSTPTPSPAHL 209
VSSI+RVLR +KE + + + G G GS P
Sbjct: 117 VSSISRVLRIKFGKKEDDEEGDKKEEDGEKKAKHSIDGILGDKGNRLDEGSGVESEPDLP 176
Query: 210 ALPHNPGSVTPISRDDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
S T + + +E FERTHYPD++ RE LA + L EAR QV NR R
Sbjct: 177 LKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARFQVWFSNRRARW 236
Query: 266 LAAQKEQQASAHN 278
Q +A N
Sbjct: 237 RKQAGANQLAAFN 249
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
SD NS + ADE + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 64 ISDGNS--DGEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 116
Query: 142 DKIGLPEARIQVSSINR 158
KIGL EARIQV NR
Sbjct: 117 MKIGLTEARIQVWFQNR 133
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 99 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 133
>gi|405963382|gb|EKC28959.1| Uncharacterized protein C3orf32 [Crassostrea gigas]
Length = 1064
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
+AD + R +RK +R RT+FTN+Q+ +LEK F +THYPDV RERLA LPEARI
Sbjct: 773 AADLLFEARFGCQRKQRRCRTAFTNQQLSTLEKTFAKTHYPDVVMRERLAMMTNLPEARI 832
Query: 152 QVSSINRVLRNLAAQK 167
QV NR + QK
Sbjct: 833 QVWFKNRRAKYRKKQK 848
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 27/44 (61%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 270
K F +THYPDV RERLA LPEARIQV NR + QK
Sbjct: 805 KTFAKTHYPDVVMRERLAMMTNLPEARIQVWFKNRRAKYRKKQK 848
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 74/147 (50%), Gaps = 25/147 (17%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
DI+ + S +D + +RK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA K
Sbjct: 18 DIDRPGSGSGVDDEDIP---RRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALK 74
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 203
IGL EARIQV N R +K+++ H + Y G P
Sbjct: 75 IGLTEARIQVWFQN---RRAKWRKQEKVGPHAHP----------------YGGYLGGQPL 115
Query: 204 PSPAHLALPHNPGSVTPISRDDAKEFE 230
P+ A+P +P S+T + K F+
Sbjct: 116 PTA---AMPVSPHSLTQLGFGLRKPFD 139
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR +
Sbjct: 48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 163 LAAQ--KEQQASAHNQTSETVYDKL 185
A+ K++Q N S + DKL
Sbjct: 108 RKAERLKDEQRKRENGESSSSLDKL 132
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQASAHNQTSETVYD 286
F +THYPDVF RE LA KI L EAR+QV NR + A+ K++Q N S + D
Sbjct: 71 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLD 130
Query: 287 KL 288
KL
Sbjct: 131 KL 132
>gi|332028547|gb|EGI68584.1| Segmentation protein paired [Acromyrmex echinatior]
Length = 492
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 67 SVTPISRDDAKEHESTSDI---NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
SV+ ISR + +S D+ + + +S +D +S+ + LKRK +R+RT+FT Q+D LE
Sbjct: 157 SVSAISRL-LRGRDSEDDVKLGDGKTSSGSDCESEPGITLKRKQRRSRTTFTAHQLDELE 215
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FE+T YPD++ RE LA + L EARIQV NR R
Sbjct: 216 RAFEKTQYPDIYVREELAQRTRLSEARIQVWFSNRRAR 253
>gi|322794106|gb|EFZ17315.1| hypothetical protein SINV_02934 [Solenopsis invicta]
Length = 486
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
Query: 67 SVTPISRDDAKEHESTSDI---NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
SV+ ISR + +S D+ + + +S +D +S+ + LKRK +R+RT+FT Q+D LE
Sbjct: 135 SVSAISRL-LRGRDSEDDVKLGDGKTSSGSDCESEPGITLKRKQRRSRTTFTAHQLDELE 193
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+ FE+T YPD++ RE LA + L EARIQV NR R
Sbjct: 194 RAFEKTQYPDIYVREELAQRTRLSEARIQVWFSNRRAR 231
>gi|383854529|ref|XP_003702773.1| PREDICTED: paired box protein Pax-3-B-like [Megachile rotundata]
Length = 483
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 67 SVTPISR----DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
SV+ ISR D ++ D + +S +D +S+ + LKRK +R+RT+FT Q+D L
Sbjct: 127 SVSAISRLLRGRDPEDEAKLGD--GKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDEL 184
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
E+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 185 ERAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 223
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 186 RAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 223
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D E D S P ++A+E+ K+K +RNRT+FT Q+ LE+ FE++HYPDV
Sbjct: 9 DLGELRKPGDGESTPPAAAEEEQP-----KKKHRRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGW 194
++RE LA K+ LPE R+QV NR + Q++ +AS+ V FN
Sbjct: 64 YSREELAMKVNLPEVRVQVWFQNRRAK-WRRQEKMEASSMKLHDTPVLS----FN----- 113
Query: 195 AWYPGSTPTPSPAHLALPHNPGSVTPIS 222
P TP P +LP +P +PIS
Sbjct: 114 --RPPMTPNVGPMSNSLPLDPWLTSPIS 139
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 12/99 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + Q++ +AS+ V
Sbjct: 53 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK-WRRQEKMEASSMKLHDTPVLS 111
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
FN P TP P +LP +P +PIS
Sbjct: 112 ----FN-------RPPMTPNVGPMSNSLPLDPWLTSPIS 139
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK+ S+ ++ T + + P T P S+ LPL+P
Sbjct: 81 QVWFQNRRAKWRRQEKM----EASSMKLHD----TPVLSFNRPPMTPNVGPMSNSLPLDP 132
Query: 399 GGFNPSSMYSSI 410
+P S +++
Sbjct: 133 WLTSPISSATTV 144
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 18/115 (15%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
+RK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA KIGL EARIQV NR +
Sbjct: 9 RRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQNRRAK-- 66
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 218
+K+++ H P + G P P+P+ PH G +
Sbjct: 67 -WRKQEKVGPH---------------AHPYSGYLSGGQPLPTPSLPVPPHTLGQL 105
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K F RTHYPDVF RE LA KIGL EARIQV NR + +K+++ H
Sbjct: 29 KAFGRTHYPDVFTREELALKIGLTEARIQVWFQNRRAK---WRKQEKVGPH--------- 76
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 321
P + G P P+P+ PH G +
Sbjct: 77 ------AHPYSGYLSGGQPLPTPSLPVPPHTLGQL 105
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 57/93 (61%), Gaps = 13/93 (13%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G++ P+ +A SD NSE DE + KRK +R RT+FT+ Q++ LEK
Sbjct: 116 GTLDPVGSSNA------SDNNSE--CELDEFAP-----KRKQRRYRTTFTSFQLEELEKA 162
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 163 FARTHYPDVFTREELAMKIGLTEARIQVWFQNR 195
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 161 KAFARTHYPDVFTREELAMKIGLTEARIQVWFQNR 195
>gi|195148028|ref|XP_002014976.1| GL18665 [Drosophila persimilis]
gi|194106929|gb|EDW28972.1| GL18665 [Drosophila persimilis]
Length = 370
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR +
Sbjct: 48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 163 LAAQ--KEQQASAHNQTSETVYDKL 185
A+ K++Q N S + DKL
Sbjct: 108 RKAERLKDEQRKRENGESSSSLDKL 132
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQASAHNQTSETVYD 286
F +THYPDVF RE LA KI L EAR+QV NR + A+ K++Q N S + D
Sbjct: 71 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLD 130
Query: 287 KL 288
KL
Sbjct: 131 KL 132
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWF NRRAKWR+ E+L++++R
Sbjct: 97 QVWFQNRRAKWRKAERLKDEQR 118
>gi|435419|gb|AAA03627.1| PAX-3-FKHR gene fusion, partial [Homo sapiens]
Length = 689
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEK-EFERTHY 131
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE FERTHY
Sbjct: 47 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELEHVAFERTHY 96
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PD++ RE LA + L EAR+QV NR R
Sbjct: 97 PDIYTREELAQRAKLTEARVQVWFSNRRAR 126
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 91 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 126
>gi|242007394|ref|XP_002424525.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
gi|212507958|gb|EEB11787.1| Paired box protein Pax-7, putative [Pediculus humanus corporis]
Length = 439
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 67 SVTPISRD-DAKEHESTSDINSEPNSS--ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
SV+ ISR ++ E IN +S +D +S+ + LKRK +R+RT+FT Q+D LE
Sbjct: 138 SVSAISRLLRGRDGEDDRKINDGCKNSDNSDCESEPGIPLKRKQRRSRTTFTALQLDELE 197
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
K FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 198 KAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 235
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
D +E + D+ +P VS+I+R+LR + +++ + + S+ +P
Sbjct: 123 DRLIKEGICDRSSVPS----VSAISRLLRGRDGEDDRKINDGCKNSDN-----SDCESEP 173
Query: 193 GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPE 251
G P + + T + D+ K FERT YPD++ RE LA + L E
Sbjct: 174 GI-----------PLKRKQRRSRTTFTALQLDELEKAFERTQYPDIYTREELAQRTKLTE 222
Query: 252 ARIQVSSINRVLR 264
ARIQV NR R
Sbjct: 223 ARIQVWFSNRRAR 235
>gi|170040812|ref|XP_001848180.1| gooseberry [Culex quinquefasciatus]
gi|167864427|gb|EDS27810.1| gooseberry [Culex quinquefasciatus]
Length = 444
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 91 SSADEDSQMR----LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
SSAD+DS L+L RK +R+RT+F EQ+++LE F RT YPDV+ RE LA K L
Sbjct: 153 SSADDDSDTESEPGLKLNRKQRRSRTTFNGEQLEALEVAFARTQYPDVYTREELAQKTRL 212
Query: 147 PEARIQVSSINRVLRNLAAQKEQQASAHN 175
EAR+QV NR R L Q Q +A N
Sbjct: 213 TEARVQVWFSNRRAR-LRKQVNSQQTAFN 240
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
F RT YPDV+ RE LA K L EAR+QV NR R L Q Q +A N
Sbjct: 192 FARTQYPDVYTREELAQKTRLTEARVQVWFSNRRAR-LRKQVNSQQTAFN 240
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 49/78 (62%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S D NS + +D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE L
Sbjct: 53 SGGDPNSPLSDPHSDDGGDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREEL 112
Query: 141 ADKIGLPEARIQVSSINR 158
A KIGL EARIQV NR
Sbjct: 113 AMKIGLTEARIQVWFQNR 130
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 96 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 130
>gi|195058138|ref|XP_001995395.1| GH22657 [Drosophila grimshawi]
gi|193899601|gb|EDV98467.1| GH22657 [Drosophila grimshawi]
Length = 433
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVL 160
++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+QV NR
Sbjct: 186 VQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRA 245
Query: 161 R 161
R
Sbjct: 246 R 246
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 217 SVTPISRD--DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
S T S D DA E F RT YPDV+ RE LA GL EAR+QV NR R
Sbjct: 195 SRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNRRAR 246
>gi|326674430|ref|XP_001919624.3| PREDICTED: paired box protein Pax-3 [Danio rerio]
Length = 653
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + + S++ SEP+ L LKRK +R+RT+FT +Q++ LE+ F
Sbjct: 195 SIEGILADRSSPSDEGSEVESEPD----------LPLKRKQRRSRTTFTADQLEELERAF 244
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
ERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 245 ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 279
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 242 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 279
>gi|24762822|ref|NP_523862.1| gooseberry-neuro [Drosophila melanogaster]
gi|27923971|sp|P09083.2|GSBN_DROME RecName: Full=Protein gooseberry-neuro; AltName: Full=BSH4;
AltName: Full=Protein gooseberry proximal
gi|7291896|gb|AAF47314.1| gooseberry-neuro [Drosophila melanogaster]
gi|17946362|gb|AAL49215.1| RE64348p [Drosophila melanogaster]
gi|220945952|gb|ACL85519.1| gsb-n-PA [synthetic construct]
gi|220952700|gb|ACL88893.1| gsb-n-PA [synthetic construct]
Length = 449
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTALTEARIQVWFSNRRAR 236
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>gi|435421|gb|AAA03628.1| PAX-3, partial [Homo sapiens]
Length = 332
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEK-EFERTHY 131
R A + + SDI+SEP+ L LKRK +R+RT+FT EQ++ LE FERTHY
Sbjct: 47 RASAPQSDEGSDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELEHVAFERTHY 96
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PD++ RE LA + L EAR+QV NR R
Sbjct: 97 PDIYTREELAQRAKLTEARVQVWFSNRRAR 126
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 91 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 126
>gi|157132386|ref|XP_001662548.1| hypothetical protein AaeL_AAEL012405 [Aedes aegypti]
gi|108871202|gb|EAT35427.1| AAEL012405-PA [Aedes aegypti]
Length = 253
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
D NS + +D + KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA
Sbjct: 173 GDPNSPMSDQHSDDGIDEFQPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAM 232
Query: 143 KIGLPEARIQVSSINRV 159
KIGL EARIQV + + +
Sbjct: 233 KIGLTEARIQVRNFSHI 249
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 28/200 (14%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER--- 139
D NS + +D + KRK +R RT+FT+ Q++ LEK F RTHYPDVF R
Sbjct: 58 GDPNSPMSDQHSDDGIDEFQPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTSHRPMG 117
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPG 199
++D+ L + I R ++ S S T PG A G
Sbjct: 118 ISDEGKL----LGAEDIPHEARPPQGSPLERGSVGTGGSSTPGSGGHHMMNSPGGAGMGG 173
Query: 200 STPTPSPAHLALPHNPGSVTPIS-----------------RDDAKEFERTHYPDVFARER 242
+P ++ H+ + + K F RTHYPDVF RE
Sbjct: 174 DPNSP----MSDQHSDDGIDEFQPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE 229
Query: 243 LADKIGLPEARIQVSSINRV 262
LA KIGL EARIQV + + +
Sbjct: 230 LAMKIGLTEARIQVRNFSHI 249
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 94 DEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
DE +Q+ +K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QV
Sbjct: 126 DEKTQVGEDMKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELAMKINLPEVRVQV 185
Query: 154 SSINR 158
NR
Sbjct: 186 WFQNR 190
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA KI LPE R+QV NR
Sbjct: 156 RAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNR 190
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 339 QVWFSNRRAKWRREEKLRNQ 358
QVWF NRRAKWRR+EK+ Q
Sbjct: 184 QVWFQNRRAKWRRQEKIEAQ 203
>gi|194886957|ref|XP_001976718.1| GG19864 [Drosophila erecta]
gi|190659905|gb|EDV57118.1| GG19864 [Drosophila erecta]
Length = 453
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTALTEARIQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR +
Sbjct: 48 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 107
Query: 163 LAAQ--KEQQASAHNQTSETVYDKL 185
A+ K++Q N S + DKL
Sbjct: 108 RKAERLKDEQRKRENGESSSSLDKL 132
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQASAHNQTSETVYD 286
F +THYPDVF RE LA KI L EAR+QV NR + A+ K++Q N S + D
Sbjct: 71 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLD 130
Query: 287 KL 288
KL
Sbjct: 131 KL 132
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 97 KRKQRRYRTTFTSFQLEELEKAFTRTHYPDVFTREELAIKIGLTEARIQVWFQNR 151
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 117 KAFTRTHYPDVFTREELAIKIGLTEARIQVWFQNR 151
>gi|195353358|ref|XP_002043172.1| GM11765 [Drosophila sechellia]
gi|195586619|ref|XP_002083071.1| GD24898 [Drosophila simulans]
gi|194127260|gb|EDW49303.1| GM11765 [Drosophila sechellia]
gi|194195080|gb|EDX08656.1| GD24898 [Drosophila simulans]
Length = 449
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTALTEARIQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>gi|195489906|ref|XP_002092936.1| GE11387 [Drosophila yakuba]
gi|194179037|gb|EDW92648.1| GE11387 [Drosophila yakuba]
Length = 449
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTALTEARIQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFSRTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>gi|259053117|emb|CAX11345.1| pairberry [Parasteatoda tepidariorum]
Length = 296
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 90 NSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
N +D +S+ + LKRK +R+RT+F+ EQ++ LE+ FERT YPD++ RE LA + GL EA
Sbjct: 144 NDESDCESEPGIPLKRKQRRSRTTFSAEQVEELERAFERTQYPDIYTREELALRTGLTEA 203
Query: 150 RIQVSSINRVLR 161
R+QV NR R
Sbjct: 204 RVQVWFSNRRAR 215
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 118 QIDSLEKEFERTHYPDVFA---RERLA-DKIGLPEARIQVSSINRVLRN--LAAQKEQQA 171
+++ +E++R + P +F+ ++RL D I E+ VSSI+RVLR L + + +
Sbjct: 65 EVEKKIEEYKRDN-PGIFSWEIKDRLVKDGICDKESVPSVSSISRVLRGSRLGSSESGDS 123
Query: 172 SAHNQTSETVYDKL---RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
++ ++ D + R+ N + PG + V + R
Sbjct: 124 CDGSKKADHSIDGILGGRLGNDESDCESEPGIPLKRKQRRSRTTFSAEQVEELER----A 179
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
FERT YPD++ RE LA + GL EAR+QV NR R
Sbjct: 180 FERTQYPDIYTREELALRTGLTEARVQVWFSNRRAR 215
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 87 SEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
+ P S A+ D KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL
Sbjct: 23 TSPESEAEVDD---FAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGL 79
Query: 147 PEARIQVSSINR 158
EARIQV NR
Sbjct: 80 TEARIQVWFQNR 91
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 57 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 91
>gi|350397864|ref|XP_003485014.1| PREDICTED: LOW QUALITY PROTEIN: protein gooseberry-like [Bombus
impatiens]
Length = 522
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 67 SVTPISRD-DAKEHESTSDINSEPNSS-ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEK 124
SV+ ISR ++ E + + SS +D +S+ + LKRK +R+RT+FT Q+D LE+
Sbjct: 172 SVSAISRLLRGRDPEDETKLGDRKTSSGSDCESEPGIPLKRKQRRSRTTFTAHQLDELER 231
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 232 AFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRAR 268
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 44 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 98
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 64 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 98
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RK +R RT+FT+ Q+D LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 35 RRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWFQNR 89
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 55 KAFGRTHYPDVFTREELALKIGLTEARIQVWFQNR 89
>gi|195430056|ref|XP_002063073.1| GK21727 [Drosophila willistoni]
gi|194159158|gb|EDW74059.1| GK21727 [Drosophila willistoni]
Length = 472
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 29 ETVYDKLRMFNGQPG-WAW-------YPGSTPPPSPAHLA--LPHNPGSVTPISRDDAKE 78
ET D+LR N PG ++W G PPS + ++ L N S S D K+
Sbjct: 100 ETRIDELRKEN--PGIFSWEIREKLIKEGFADPPSTSSISRLLRGNDRS----SEDGRKD 153
Query: 79 HESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARE 138
+ + S + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT YPDV+ RE
Sbjct: 154 YTIHGLLGSRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFARTQYPDVYTRE 213
Query: 139 RLADKIGLPEARIQVSSINRVLR 161
LA L EARIQV NR R
Sbjct: 214 ELAQTTALTEARIQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFARTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>gi|254733060|gb|ACT79975.1| paired [Nasonia vitripennis]
Length = 213
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Query: 67 SVTPISR-------DDAKEHE----STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFT 115
SV+ ISR +DAK ++ S SD SEP ++LKRK +R+RT+FT
Sbjct: 115 SVSAISRLIRDRDPEDAKLNDGKASSGSDCESEPG----------IQLKRKQRRSRTTFT 164
Query: 116 NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+Q+D LE+ FERT YPD++ RE LA + L EARIQV NR
Sbjct: 165 AQQLDELERAFERTQYPDIYTREELAQRTKLTEARIQVWFSNR 207
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FERT YPD++ RE LA + L EARIQV NR
Sbjct: 173 RAFERTQYPDIYTREELAQRTKLTEARIQVWFSNR 207
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 93 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 147
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 113 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 147
>gi|156401143|ref|XP_001639151.1| predicted protein [Nematostella vectensis]
gi|156226277|gb|EDO47088.1| predicted protein [Nematostella vectensis]
Length = 525
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
+K S +S + S DE + + +R RT+FT+EQI+ LEK FE+THYPDVF
Sbjct: 195 SKRKYSVDSADSTGSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVF 254
Query: 136 ARERLADKIGLPEARIQVSSINR 158
RE LA ++ L EARIQV NR
Sbjct: 255 TREELAQQVNLSEARIQVWYSNR 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FE+THYPDVF RE LA ++ L EARIQV NR
Sbjct: 243 KVFEKTHYPDVFTREELAQQVNLSEARIQVWYSNR 277
>gi|340381446|ref|XP_003389232.1| PREDICTED: hypothetical protein LOC100634701 [Amphimedon
queenslandica]
Length = 415
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D +E SD S+ NS+ D+D++ +K +R RT+++N Q+D LE F THY
Sbjct: 214 SDDRGEEDYGPSDEESDSNSTTDKDAE-----PKKPKRTRTAYSNSQLDQLELIFATTHY 268
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 191
PDVF RE L+ ++G+ E RIQV NR R ++ S ++ + +KL+ N
Sbjct: 269 PDVFTREDLSRRLGIREDRIQVWFQNRRARFRKQERTGSISCRSRYRQKRLEKLQH-NFM 327
Query: 192 PGWAWYP 198
P A YP
Sbjct: 328 PSSAGYP 334
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F THYPDVF RE L+ ++G+ E RIQV NR R ++ S ++ + +KL
Sbjct: 263 FATTHYPDVFTREDLSRRLGIREDRIQVWFQNRRARFRKQERTGSISCRSRYRQKRLEKL 322
Query: 289 RMFNGQPGWAWYP 301
+ N P A YP
Sbjct: 323 QH-NFMPSSAGYP 334
>gi|56785870|gb|AAW29067.1| homeodomain transcription factor PaxB [Nematostella vectensis]
Length = 525
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
+K S +S + S DE + + +R RT+FT+EQI+ LEK FE+THYPDVF
Sbjct: 195 SKRKYSVDSADSTGSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVF 254
Query: 136 ARERLADKIGLPEARIQVSSINR 158
RE LA ++ L EARIQV NR
Sbjct: 255 TREELAQQVNLSEARIQVWYSNR 277
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FE+THYPDVF RE LA ++ L EARIQV NR
Sbjct: 243 KVFEKTHYPDVFTREELAQQVNLSEARIQVWYSNR 277
>gi|157107387|ref|XP_001649756.1| hypothetical protein AaeL_AAEL014848 [Aedes aegypti]
gi|108868691|gb|EAT32916.1| AAEL014848-PA, partial [Aedes aegypti]
Length = 169
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+KL+RNRT+F+++Q+ +LE+ FERTHYPD F RE +A K+GL EAR+QV NR
Sbjct: 15 KKLRRNRTTFSSDQLSALEQIFERTHYPDAFLREEIASKVGLSEARVQVWFQNR 68
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FERTHYPD F RE +A K+GL EAR+QV NR
Sbjct: 36 FERTHYPDAFLREEIASKVGLSEARVQVWFQNR 68
>gi|195353360|ref|XP_002043173.1| GM11922 [Drosophila sechellia]
gi|194127261|gb|EDW49304.1| GM11922 [Drosophila sechellia]
Length = 265
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 51/66 (77%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA GL EAR+Q
Sbjct: 171 SEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARVQ 230
Query: 153 VSSINR 158
V NR
Sbjct: 231 VWFSNR 236
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 225 DAKE--FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
DA E F RT YPDV+ RE LA GL EAR+QV NR
Sbjct: 198 DALERIFARTQYPDVYTREELAQSTGLTEARVQVWFSNR 236
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 91 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 145
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 111 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 145
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWR++EK+ Q ++ + + + P + P R P +
Sbjct: 139 QVWFQNRRAKWRKQEKVGPQGHPYNPYLSPGGGGPAPSVVAPSLPNPFNLPFGLRKPFDS 198
Query: 399 GGFN--PSSMYSSIPQPAGMDSYNPSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAA 456
F P + S +P P G P+ L + + SS F L ++ +A +
Sbjct: 199 LSFRYPPHVLPSYLPSPPGYHRGGPALLPPSVSLYPSASS----FQTLLANISAAQRPKL 254
Query: 457 PAAHSSPHPHPAHPGSS 473
PA + P P PG S
Sbjct: 255 PAQEFTTSP-PLSPGGS 270
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR R
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAK 145
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 213
++E+ +A SE Y M N G PG W P + P LA PH
Sbjct: 146 WRRQEKMEAARLGLSE--YHAANMRNVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 200
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE Y
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE--YH 163
Query: 287 KLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 316
M N G PG W P + P LA PH
Sbjct: 164 AANMRNVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 200
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWF NRRAKWRR+EK+ R G
Sbjct: 136 QVWFQNRRAKWRRQEKMEAARLG 158
>gi|195350993|ref|XP_002042021.1| GM26340 [Drosophila sechellia]
gi|194123845|gb|EDW45888.1| GM26340 [Drosophila sechellia]
Length = 613
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 196 EDISDCESEPG----------IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREE 245
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 246 LAQRTNLTEARIQVWFSNRRAR 267
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 230 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 267
>gi|195472307|ref|XP_002088442.1| GE12435 [Drosophila yakuba]
gi|194174543|gb|EDW88154.1| GE12435 [Drosophila yakuba]
Length = 612
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 196 EDISDCESEPG----------IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREE 245
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 246 LAQRTNLTEARIQVWFSNRRAR 267
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 230 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 267
>gi|321453327|gb|EFX64572.1| hypothetical protein DAPPUDRAFT_15023 [Daphnia pulex]
Length = 202
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 21/115 (18%)
Query: 44 WAWYPGSTPPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRL 103
++W + PP S L + S +S DI SEP + L
Sbjct: 100 FSWDSATDPPISGGGLCVYTGSSSDCDLS-----------DIESEPG----------ITL 138
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R+RT+F+ EQ++ LE+ FERT YPDV+ RE LA K L EAR+QV NR
Sbjct: 139 KRKQRRSRTTFSAEQLEELERSFERTQYPDVYTREELAQKTKLTEARVQVWFSNR 193
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FERT YPDV+ RE LA K L EAR+QV NR
Sbjct: 159 RSFERTQYPDVYTREELAQKTKLTEARVQVWFSNR 193
>gi|24583824|ref|NP_723721.1| paired, isoform B [Drosophila melanogaster]
gi|123412|sp|P06601.1|PRD_DROME RecName: Full=Segmentation protein paired
gi|158160|gb|AAB59221.1| segmentation protein [Drosophila melanogaster]
gi|22946299|gb|AAN10801.1| paired, isoform B [Drosophila melanogaster]
Length = 613
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 196 EDISDCESEPG----------IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREE 245
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 246 LAQRTNLTEARIQVWFSNRRAR 267
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 230 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 267
>gi|17737409|ref|NP_523556.1| paired, isoform A [Drosophila melanogaster]
gi|7297914|gb|AAF53160.1| paired, isoform A [Drosophila melanogaster]
gi|16076848|gb|AAL13353.1| GH22686p [Drosophila melanogaster]
gi|220945620|gb|ACL85353.1| prd-PA [synthetic construct]
gi|220952756|gb|ACL88921.1| prd-PA [synthetic construct]
Length = 590
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 173 EDISDCESEPG----------IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREE 222
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 223 LAQRTNLTEARIQVWFSNRRAR 244
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 207 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 244
>gi|345433362|dbj|BAK69338.1| paired-box transcription factor [Balanoglossus simodensis]
Length = 214
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 55/80 (68%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A++ S I S + +D + Q L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++
Sbjct: 135 ARKSHSIEGILSRQDGESDCELQPDLPLKRKQRRSRTTFTCEQLEHLERAFERTHYPDIY 194
Query: 136 ARERLADKIGLPEARIQVSS 155
RE LA + L EAR+QV++
Sbjct: 195 TREELAQRASLTEARVQVNN 214
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSS 258
FERTHYPD++ RE LA + L EAR+QV++
Sbjct: 185 FERTHYPDIYTREELAQRASLTEARVQVNN 214
>gi|195578673|ref|XP_002079188.1| GD22133 [Drosophila simulans]
gi|194191197|gb|EDX04773.1| GD22133 [Drosophila simulans]
Length = 613
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 196 EDISDCESEPG----------IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREE 245
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 246 LAQRTNLTEARIQVWFSNRRAR 267
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 230 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 267
>gi|194753694|ref|XP_001959145.1| GF12207 [Drosophila ananassae]
gi|190620443|gb|EDV35967.1| GF12207 [Drosophila ananassae]
Length = 925
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 544 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 603
Query: 151 IQVSSINRVLRN 162
+Q+ N ++ N
Sbjct: 604 VQLGLGNCLVCN 615
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE++HYPDV++RE LA K+ LPE R+Q+ N ++ N
Sbjct: 577 RAFEKSHYPDVYSREELAMKVNLPEVRVQLGLGNCLVCN 615
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
+VWF NRRAKWRR+EK + R G T
Sbjct: 618 KVWFQNRRAKWRRQEKSESLRLGLT 642
>gi|15146041|gb|AAK82937.1| pairberry 2 transcription factor [Schistocerca americana]
Length = 341
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D K++ + +S D +S+ + LKRK +R+RT+F+ +Q+++LE+ F+RT YPDV
Sbjct: 104 DKKDYTIDGILGGRCDS--DTESEPGIPLKRKQRRSRTTFSGDQLETLERAFQRTQYPDV 161
Query: 135 FARERLADKIGLPEARIQVSSINRVLR 161
+ RE LA + GL EARIQV NR R
Sbjct: 162 YTREELARRTGLSEARIQVWFSNRRAR 188
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F+RT YPDV+ RE LA + GL EARIQV NR R
Sbjct: 151 RAFQRTQYPDVYTREELARRTGLSEARIQVWFSNRRAR 188
>gi|391335340|ref|XP_003742052.1| PREDICTED: homeobox protein OTX1 B-like [Metaseiulus occidentalis]
Length = 347
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 62 PHNPGSVTPISRDD----AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
PH P + DD E S N P +D SQ + RK +R RT+FT
Sbjct: 36 PHAPIRLDKYRADDWDSQMLEDSWYSTANCHPGRISDIKSQKGITAPRKQRRERTTFTRA 95
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR
Sbjct: 96 QLDVLESLFSKTRYPDIFMREEVALKINLPESRVQVWFKNR 136
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +T YPD+F RE +A KI LPE+R+QV NR
Sbjct: 104 FSKTRYPDIFMREEVALKINLPESRVQVWFKNR 136
>gi|194765997|ref|XP_001965111.1| GF23439 [Drosophila ananassae]
gi|190617721|gb|EDV33245.1| GF23439 [Drosophila ananassae]
Length = 613
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 197 EDISDCESEPG----------IALKRKQRRCRTTFSAAQLDELERAFERTQYPDIYTREE 246
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 247 LAQRTNLTEARIQVWFSNRRAR 268
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 231 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 268
>gi|410927106|ref|XP_003977007.1| PREDICTED: paired box protein Pax-7-like, partial [Takifugu
rubripes]
Length = 66
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 10/73 (13%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
+ SD++SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE
Sbjct: 4 DEVSDVDSEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREE 53
Query: 140 LADKIGLPEARIQ 152
LA + L EAR+Q
Sbjct: 54 LAQRTKLTEARVQ 66
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQ 255
K FERTHYPD++ RE LA + L EAR+Q
Sbjct: 38 KAFERTHYPDIYTREELAQRTKLTEARVQ 66
>gi|194861365|ref|XP_001969768.1| GG10275 [Drosophila erecta]
gi|190661635|gb|EDV58827.1| GG10275 [Drosophila erecta]
Length = 614
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 196 EDISDCESEPG----------IALKRKQRRCRTTFSASQLDELERAFERTQYPDIYTREE 245
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 246 LAQRTNLTEARIQVWFSNRRAR 267
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 230 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 267
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
++ +RNRT+FT Q+D+LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 164 KRQRRNRTTFTTAQLDALEKVFERTHYPDAFLREELAKKVDLTEARVQVWFQNR 217
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 183 KVFERTHYPDAFLREELAKKVDLTEARVQVWFQNR 217
>gi|198464863|ref|XP_002134862.1| GA23573 [Drosophila pseudoobscura pseudoobscura]
gi|198149913|gb|EDY73489.1| GA23573 [Drosophila pseudoobscura pseudoobscura]
Length = 661
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 83 SDINSEPNSSAD---EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
+D++++ N D EDS+ + + K +RNRT+F+ EQ+D LEKEFE++HYP V RE+
Sbjct: 362 ADVDTDANRVIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFEKSHYPCVSTREK 421
Query: 140 LADKIGLPEARIQVSSINR 158
LA + L EAR+QV NR
Sbjct: 422 LAGRTALSEARVQVWFSNR 440
>gi|195386642|ref|XP_002052013.1| GJ23973 [Drosophila virilis]
gi|194148470|gb|EDW64168.1| GJ23973 [Drosophila virilis]
Length = 619
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q++ LE+ FERT YPD+F RE
Sbjct: 193 EEVSDCESEPG----------IALKRKQRRCRTTFSAAQLEELERAFERTQYPDIFTREE 242
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 243 LAQRTNLTEARIQVWFSNRRAR 264
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD+F RE LA + L EARIQV NR R
Sbjct: 227 RAFERTQYPDIFTREELAQRTNLTEARIQVWFSNRRAR 264
>gi|405973463|gb|EKC38178.1| Paired box protein Pax-6 [Crassostrea gigas]
Length = 360
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 79/171 (46%), Gaps = 32/171 (18%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
VSSINR++RN AA + A A RM N +P PP + L+ P
Sbjct: 128 VSSINRIIRNRAADRTAMAYA------------RMLNN--SLYQFPPPAPPLWSSMLSFP 173
Query: 63 HNPGSVTPISRDDAKEH---------------ESTSDINSEPNSSADEDSQMRLRLKRKL 107
P R + EH E +I S+ + ED + KL
Sbjct: 174 DPSTIYRPQHRSE--EHTEMFKATQEFEPVCSEEEKEITSKDTCTPKEDEETETSTS-KL 230
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT++Q+D LE+ F++ HYP V RE LA K L EAR+QV NR
Sbjct: 231 RRNRTTFTSQQLDLLEQSFQKAHYPGVQTREELATKTNLSEARVQVWFSNR 281
>gi|389614437|dbj|BAM20266.1| aristaless, partial [Papilio xuthus]
Length = 80
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 5 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 59
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 25 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 59
>gi|195442996|ref|XP_002069225.1| GK21081 [Drosophila willistoni]
gi|194165310|gb|EDW80211.1| GK21081 [Drosophila willistoni]
Length = 614
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E SD SEP + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE
Sbjct: 193 EDISDCESEPG----------IALKRKQRRCRTTFSAAQLDELERAFERTQYPDIYTREE 242
Query: 140 LADKIGLPEARIQVSSINRVLR 161
LA + L EARIQV NR R
Sbjct: 243 LAQRTNLTEARIQVWFSNRRAR 264
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 227 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 264
>gi|327387652|gb|AEA72424.1| paired-box 3 [Solea senegalensis]
Length = 221
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 62 PHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
P S+ I D + + SD++SEP L LKRK +R+RT+FT EQ++
Sbjct: 141 PRTKHSIDGILGDRSSHSDEGSDVDSEPG----------LPLKRKQRRSRTTFTAEQLEE 190
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQ 152
LE+ FERTHYPD++ RE LA + L EAR+Q
Sbjct: 191 LERAFERTHYPDIYTREELAQRAKLTEARVQ 221
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQ 255
FERTHYPD++ RE LA + L EAR+Q
Sbjct: 195 FERTHYPDIYTREELAQRAKLTEARVQ 221
>gi|80751123|ref|NP_001032182.1| dorsal root ganglia homeobox protein [Danio rerio]
gi|58759849|gb|AAW81987.1| paired-like homeodomain transcription factor DRG11 [Danio rerio]
Length = 287
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 44/56 (78%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVFARE LA KI L EAR+QV NR
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWFQNR 93
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVFARE LA KI L EAR+QV NR
Sbjct: 61 FAQTHYPDVFAREELAMKINLTEARVQVWFQNR 93
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN 370
QVWF NRRAKWR+ E+ +++ G +N N
Sbjct: 87 QVWFQNRRAKWRKTERGTSEQDGGKEQMNEGN 118
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 537 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 596
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 597 VQVWFQNR 604
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 570 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 604
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 34/181 (18%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK + R G T + + V P SPP S LP
Sbjct: 598 QVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPW-LSPPLLSALP--- 653
Query: 399 GGF--NPSSMY-SSIPQPAGMDSYNPSCLQQAAREHHH----------------HSSYSY 439
GF +P ++Y S + P + N + AA HHH
Sbjct: 654 -GFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPP 712
Query: 440 MFHDSLHSLQSAYQRAAPAAHSSPH-----PHPA-----HPGSSPYGTSNSVNGPPTSTG 489
P +H SPH PH H G +P GT + PP+ST
Sbjct: 713 PPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSMGSPHHGVTPLGTPLHSSLPPSSTA 772
Query: 490 T 490
T
Sbjct: 773 T 773
>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
Length = 906
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 545 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 604
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 605 VQVWFQNR 612
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 578 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 612
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 34/181 (18%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK + R G T + + V P SPP S LP
Sbjct: 606 QVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPW-LSPPLLSALP--- 661
Query: 399 GGF--NPSSMY-SSIPQPAGMDSYNPSCLQQAAREHHH----------------HSSYSY 439
GF +P ++Y S + P + N + AA HHH
Sbjct: 662 -GFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPP 720
Query: 440 MFHDSLHSLQSAYQRAAPAAHSSPH-----PHPA-----HPGSSPYGTSNSVNGPPTSTG 489
P +H SPH PH H G +P GT + PP+ST
Sbjct: 721 PPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVNPLGTPLHSSLPPSSTA 780
Query: 490 T 490
T
Sbjct: 781 T 781
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella teleta]
Length = 116
Score = 74.3 bits (181), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
+RK +RNRT+FT +Q++ LEK F +THYPDVF RE LA +I L EAR+QV NR +
Sbjct: 47 RRKQRRNRTTFTLQQLEELEKAFAQTHYPDVFTREELAMRINLTEARVQVWFQNRRAKWR 106
Query: 164 AAQKEQQ 170
+++ QQ
Sbjct: 107 KSERFQQ 113
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
K F +THYPDVF RE LA +I L EAR+QV NR + +++ QQ
Sbjct: 67 KAFAQTHYPDVFTREELAMRINLTEARVQVWFQNRRAKWRKSERFQQ 113
>gi|331271828|gb|AED02519.1| paired box 3 protein [Coturnix japonica]
Length = 114
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 10/79 (12%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SDI+SEP+ L LK K +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA
Sbjct: 39 SDIDSEPD----------LPLKGKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQ 88
Query: 143 KIGLPEARIQVSSINRVLR 161
+ L EAR+QV NR R
Sbjct: 89 RAKLTEARVQVWFSNRRAR 107
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 72 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 107
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR +
Sbjct: 65 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 124
Query: 163 LAAQ--KEQQASAHNQTSETVYDKL 185
A+ K++Q N S + +KL
Sbjct: 125 RKAERLKDEQRKRENGESSSSLEKL 149
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQASAHNQTSETVYD 286
F +THYPDVF RE LA KI L EAR+QV NR + A+ K++Q N S + +
Sbjct: 88 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLE 147
Query: 287 KL 288
KL
Sbjct: 148 KL 149
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 20/22 (90%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWF NRRAKWR+ E+L++++R
Sbjct: 114 QVWFQNRRAKWRKAERLKDEQR 135
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 534 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 593
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 594 VQVWFQNR 601
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 567 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 601
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 34/181 (18%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK + R G T + + V P SPP S LP
Sbjct: 595 QVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPW-LSPPLLSALP--- 650
Query: 399 GGF--NPSSMY-SSIPQPAGMDSYNPSCLQQAAREHHH----------------HSSYSY 439
GF +P ++Y S + P + N + AA HHH
Sbjct: 651 -GFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPP 709
Query: 440 MFHDSLHSLQSAYQRAAPAAHSSPH-----PHPA-----HPGSSPYGTSNSVNGPPTSTG 489
P +H SPH PH H G +P GT + PP+ST
Sbjct: 710 PPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTA 769
Query: 490 T 490
T
Sbjct: 770 T 770
>gi|110762829|ref|XP_001121339.1| PREDICTED: hypothetical protein LOC725502 [Apis mellifera]
Length = 250
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D +S P S ED Q KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +
Sbjct: 74 DFSSSPGS---EDRQSTGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALR 130
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAH 174
I L EAR+QV NR + +K+ + + H
Sbjct: 131 IQLTEARVQVWFQNRRAKWRKQEKQCKVTTH 161
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 277
+ F++THYPDVF RE LA +I L EAR+QV NR + +K+ + + H
Sbjct: 111 RAFQKTHYPDVFFREELALRIQLTEARVQVWFQNRRAKWRKQEKQCKVTTH 161
>gi|313212674|emb|CBY36614.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S S I +P A+E S K+K +RNRT+FT Q+ LE+ FE++HYPDV+ARE L
Sbjct: 28 SISSILLKPEK-AEEQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREEL 86
Query: 141 ADKIGLPEARIQVSSINR 158
A KI LPE R+QV NR
Sbjct: 87 ATKISLPEVRVQVWFQNR 104
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV+ARE LA KI LPE R+QV NR
Sbjct: 70 RAFEKSHYPDVYAREELATKISLPEVRVQVWFQNR 104
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 98 QVWFQNRRAKWRRQEKV 114
>gi|2950355|emb|CAA11241.1| homebox protein DRx [Drosophila melanogaster]
Length = 902
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 543 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 602
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 603 VQVWFQNR 610
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 576 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 610
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 70/179 (39%), Gaps = 32/179 (17%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK + R G T + + V P SPP S LP
Sbjct: 604 QVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPW-LSPPLLSALP--- 659
Query: 399 GGF--NPSSMYSS--IPQPAGMDSYN--------PSCLQQAAREH-----HHHSSYSYMF 441
GF +P ++Y S PQP S + P C Q AA H H
Sbjct: 660 -GFLSHPQTVYPSYLTPQPGARKSDHEQSGGHGPPPCPQWAAAPHVGHGGHGQPQPPPPP 718
Query: 442 HDSLHSLQSAYQRAAPAAHSSPH-----PHPA-----HPGSSPYGTSNSVNGPPTSTGT 490
P +H SPH PH H G +P GT + PP+ST T
Sbjct: 719 PPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTAT 777
>gi|348522046|ref|XP_003448537.1| PREDICTED: retinal homeobox protein Rx2-like [Oreochromis
niloticus]
Length = 326
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D P ++ DE+ K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K
Sbjct: 117 DAEGSPETTKDEE-----HAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMK 171
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT 203
+ LPE R+QV NR A+ +Q T + + FN P TP
Sbjct: 172 VNLPEVRVQVWFQNR-----RAKWRRQEKMDTTTMKLHDSSMLSFN-------RPPMTPN 219
Query: 204 PSPAHLALPHNPGSVTPIS 222
P +P +P +PIS
Sbjct: 220 VGPVANPMPLDPWLTSPIS 238
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR A+ +Q T +
Sbjct: 152 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR-----RAKWRRQEKMDTTTMKLHDS 206
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P TP P +P +P +PIS
Sbjct: 207 SMLSFN-------RPPMTPNVGPVANPMPLDPWLTSPIS 238
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 180 QVWFQNRRAKWRRQEKM 196
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 56 PAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFT 115
P HL + SV+ DA++ S+ S + S DE+ KRK +R RT+F+
Sbjct: 133 PLHLTMHETAPSVS-----DAQDLSILSEQQSPCSGSPDENG------KRKQRRYRTTFS 181
Query: 116 NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
Q+D LEK F RTHYPDVF RE LA ++ L EAR+QV NR
Sbjct: 182 AYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNR 224
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA ++ L EAR+QV NR
Sbjct: 190 KVFARTHYPDVFTREELAQRVILTEARVQVWFQNR 224
>gi|242009926|ref|XP_002425733.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
gi|212509634|gb|EEB12995.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
Length = 229
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 66/117 (56%), Gaps = 26/117 (22%)
Query: 3 VSSINRVLRNLAAQKEQQASAHN--QTSETVYDKLRMFNGQPGW----AWYP--GSTP-- 52
VSSINRVLRNLAAQKEQQ+ + SE+VYDKLR+ NGQPGW WYP G +P
Sbjct: 125 VSSINRVLRNLAAQKEQQSQSAQVPAPSESVYDKLRILNGQPGWPRPNPWYPTTGGSPFS 184
Query: 53 --PP--SPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKR 105
PP SP H H+ ++ P S +K+ + I D D + R RLKR
Sbjct: 185 NLPPSISPGH----HSSCTILPDSDIHSKKSKERMRI--------DRDEKERERLKR 229
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 78/150 (52%), Gaps = 28/150 (18%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +F+R P +FA R+RL + I VSSINRVLRNLAAQKEQQ
Sbjct: 85 TTEVVSKIS-QFKR-ECPSIFAWEIRDRLLQEGICTNDNIPSVSSINRVLRNLAAQKEQQ 142
Query: 171 ASAHN--QTSETVYDKLRMFNGQPGW----AWYPGSTPTP--------SPAHLALPHNPG 216
+ + SE+VYDKLR+ NGQPGW WYP + +P SP H H+
Sbjct: 143 SQSAQVPAPSESVYDKLRILNGQPGWPRPNPWYPTTGGSPFSNLPPSISPGH----HSSC 198
Query: 217 SVTP---ISRDDAKEFERTHYPDVFARERL 243
++ P I +KE R D RERL
Sbjct: 199 TILPDSDIHSKKSKERMRIDR-DEKERERL 227
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
Query: 228 EFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHN--QTS 281
+F+R P +FA R+RL + I VSSINRVLRNLAAQKEQQ+ + S
Sbjct: 94 QFKR-ECPSIFAWEIRDRLLQEGICTNDNIPSVSSINRVLRNLAAQKEQQSQSAQVPAPS 152
Query: 282 ETVYDKLRMFNGQPGW----AWYPGSTPTP 307
E+VYDKLR+ NGQPGW WYP + +P
Sbjct: 153 ESVYDKLRILNGQPGWPRPNPWYPTTGGSP 182
>gi|158290000|ref|XP_559100.2| AGAP010358-PA [Anopheles gambiae str. PEST]
gi|157018429|gb|EAL41046.2| AGAP010358-PA [Anopheles gambiae str. PEST]
Length = 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMR----LRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
D + + S + I E SS DEDS + LKRK +R+RT+F EQ+++LE F RT
Sbjct: 151 DLRGNHSINGILGE--SSCDEDSDTESEPGITLKRKQRRSRTTFNGEQLEALEIAFSRTQ 208
Query: 131 YPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
YPDV+ RE LA K L EAR+QV NR R QQ A
Sbjct: 209 YPDVYTREELAQKTKLTEARVQVWFSNRRARLRKHMSSQQMVAFG 253
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 26/50 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
F RT YPDV+ RE LA K L EAR+QV NR R QQ A
Sbjct: 204 FSRTQYPDVYTREELAQKTKLTEARVQVWFSNRRARLRKHMSSQQMVAFG 253
>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
Length = 873
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 512 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 571
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 572 VQVWFQNR 579
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 545 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 579
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 34/181 (18%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK + R G T + + V P SPP S LP
Sbjct: 573 QVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPW-LSPPLLSALP--- 628
Query: 399 GGF--NPSSMY-SSIPQPAGMDSYNPSCLQQAAREHHH----------------HSSYSY 439
GF +P ++Y S + P + N + AA HHH
Sbjct: 629 -GFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPP 687
Query: 440 MFHDSLHSLQSAYQRAAPAAHSSPH-----PHPA-----HPGSSPYGTSNSVNGPPTSTG 489
P +H SPH PH H G +P GT + PP+ST
Sbjct: 688 PPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTA 747
Query: 490 T 490
T
Sbjct: 748 T 748
>gi|426329500|ref|XP_004025778.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Gorilla gorilla gorilla]
Length = 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 129 KQRSLQKEQLQKQKEAEGSHGEGKAEAATPDTQLDTDQP--PRLPGSDP-PAELHLSL 183
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 148 HGEGKAEAATPDTQLDTDQP--PRLPGSDP-PAELHLSL 183
>gi|194318573|gb|ACF47676.1| paired box gene 3, partial [Capra hircus]
Length = 68
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 10/70 (14%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SDI+SEP+ L LKRK +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA
Sbjct: 9 SDIDSEPD----------LPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQ 58
Query: 143 KIGLPEARIQ 152
+ L EAR+Q
Sbjct: 59 RAKLTEARVQ 68
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQ 255
FERTHYPD++ RE LA + L EAR+Q
Sbjct: 42 FERTHYPDIYTREELAQRAKLTEARVQ 68
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 65 PGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRL-----------RLKRKLQRNRTS 113
PG + +S K + +++ N+ N ++D + + KRK +RNRT+
Sbjct: 44 PGLLGGVSSGIHKSEQDSTNNNAGANGKGNDDVKSPMGDSKDDDKNDSDAKRKKRRNRTT 103
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 104 FTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 148
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 114 KVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 148
>gi|426329498|ref|XP_004025777.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Gorilla gorilla gorilla]
Length = 379
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 124 KQRSLQKEQLQKQKEAEGSHGEGKAEAATPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 143 HGEGKAEAATPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
>gi|195124301|ref|XP_002006632.1| GI18478 [Drosophila mojavensis]
gi|193911700|gb|EDW10567.1| GI18478 [Drosophila mojavensis]
Length = 464
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTIHGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTSLTEARIQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFSRTQYPDVYTREELAQTTSLTEARIQVWFSNRRAR 236
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+AD D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 SAADFDDGF---LRRKQRRNRTTFTLQQLEALETVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|270008150|gb|EFA04598.1| aristaless [Tribolium castaneum]
Length = 182
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSI 156
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQV +
Sbjct: 63 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVGVV 115
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 25/33 (75%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
K F RTHYPDVF RE LA KIGL EARIQV +
Sbjct: 83 KAFSRTHYPDVFTREELAMKIGLTEARIQVGVV 115
>gi|195401629|ref|XP_002059415.1| GJ17468 [Drosophila virilis]
gi|194142421|gb|EDW58827.1| GJ17468 [Drosophila virilis]
Length = 881
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
Query: 81 STSDINSEPNS--------SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
S+ D+N NS +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYP
Sbjct: 509 SSEDLNQTNNSEQGEKITSGSDDEGQDENCAKKKHRRNRTTFTTYQLHELERAFEKSHYP 568
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV++RE LA K+ LPE R+QV NR
Sbjct: 569 DVYSREELAMKVNLPEVRVQVWFQNR 594
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 560 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 594
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
QVWF NRRAKWRR+EK + R G T
Sbjct: 588 QVWFQNRRAKWRRQEKSESLRLGLT 612
>gi|347966006|ref|XP_321639.5| AGAP001483-PA [Anopheles gambiae str. PEST]
gi|333470253|gb|EAA01329.5| AGAP001483-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 97 SQMRLRLK----RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
S + +R K +K +RNRT+FT Q+ +LEK FE+THYPD F RE LA+K+GL EAR+Q
Sbjct: 9 SDLSMRTKSCTLKKPRRNRTTFTTNQLTALEKIFEKTHYPDAFVREELANKVGLSEARVQ 68
Query: 153 VSSINR 158
V NR
Sbjct: 69 VWFQNR 74
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FE+THYPD F RE LA+K+GL EAR+QV NR
Sbjct: 40 KIFEKTHYPDAFVREELANKVGLSEARVQVWFQNR 74
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++S+ + S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE L
Sbjct: 535 NSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 594
Query: 141 ADKIGLPEARIQVSSINR 158
A K+ LPE R+QV NR
Sbjct: 595 AMKVNLPEVRVQVWFQNR 612
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 578 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 612
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
QVWF NRRAKWRR+EK + R G T
Sbjct: 606 QVWFQNRRAKWRRQEKSESLRLGLT 630
>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
Length = 879
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
Query: 81 STSDINSEPNS--------SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
S+ D+N NS +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYP
Sbjct: 510 SSEDLNQTNNSEQGEKITSGSDDEGQDENCAKKKHRRNRTTFTTYQLHELERAFEKSHYP 569
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV++RE LA K+ LPE R+QV NR
Sbjct: 570 DVYSREELAMKVNLPEVRVQVWFQNR 595
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 561 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 595
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
QVWF NRRAKWRR+EK + R G T
Sbjct: 589 QVWFQNRRAKWRRQEKSESLRLGLT 613
>gi|125809508|ref|XP_001361148.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|195154827|ref|XP_002018314.1| GL16831 [Drosophila persimilis]
gi|54636322|gb|EAL25725.1| GA15432 [Drosophila pseudoobscura pseudoobscura]
gi|194114110|gb|EDW36153.1| GL16831 [Drosophila persimilis]
Length = 461
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTIHGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFARTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTALTEARIQVWFSNRRAR 236
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFARTQYPDVYTREELAQTTALTEARIQVWFSNRRAR 236
>gi|194747107|ref|XP_001955994.1| GF24980 [Drosophila ananassae]
gi|190623276|gb|EDV38800.1| GF24980 [Drosophila ananassae]
Length = 618
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
SR E DI E + S D D + K +RNRT+F+ EQ+D LEKEFE++HY
Sbjct: 341 SRSPDGEANRMIDIEGEDSESQDSD-------QPKFRRNRTTFSPEQLDELEKEFEKSHY 393
Query: 132 PDVFARERLADKIGLPEARIQVSSINR 158
P V RE+LA + L EAR+QV NR
Sbjct: 394 PCVSTREKLAGRTALSEARVQVWFSNR 420
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE++HYP V RE+LA + L EAR+QV NR
Sbjct: 386 KEFEKSHYPCVSTREKLAGRTALSEARVQVWFSNR 420
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 10/104 (9%)
Query: 65 PGSVTPISRDDAKEHESTSDINSEPNSSADED----------SQMRLRLKRKLQRNRTSF 114
PG +T +S K + +++ N+ N ++D + KRK +RNRT+F
Sbjct: 148 PGLLTGMSGGMHKAEQDSTNNNAGANGKGNDDVKSPGDPKDDDKNDSDAKRKKRRNRTTF 207
Query: 115 TNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 208 TSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 251
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 217 KVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 251
>gi|198475763|ref|XP_001357148.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
gi|198137948|gb|EAL34215.2| GA19807 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D +S+ + LKRK +R RT+F+ Q+D LE+ FERT YPD++ RE LA + L EARIQ
Sbjct: 203 SDCESEPGIALKRKQRRCRTTFSAAQLDELERAFERTQYPDIYTREELAQRTNLTEARIQ 262
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 263 VWFSNRRAR 271
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD++ RE LA + L EARIQV NR R
Sbjct: 234 RAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRAR 271
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 85 INSEPNSSAD--EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
IN P+S ++ EDS KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA
Sbjct: 191 INDRPSSCSNSPEDSG-----KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQ 245
Query: 143 KIGLPEARIQVSSINR 158
++ L EAR+QV NR
Sbjct: 246 RVILTEARVQVWFQNR 261
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA ++ L EAR+QV NR
Sbjct: 227 KVFARTHYPDVFTREELAQRVILTEARVQVWFQNR 261
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++S+ + S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE L
Sbjct: 534 NSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 593
Query: 141 ADKIGLPEARIQVSSINR 158
A K+ LPE R+QV NR
Sbjct: 594 AMKVNLPEVRVQVWFQNR 611
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 577 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 611
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
QVWF NRRAKWRR+EK + R G T
Sbjct: 605 QVWFQNRRAKWRRQEKSESLRLGLT 629
>gi|158170|gb|AAA28837.1| BSH9 encoded protein, partial [Drosophila melanogaster]
Length = 80
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 85 INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
+ SE S ++D++ ++LKRK +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA
Sbjct: 1 VGSEDES--EDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQST 58
Query: 145 GLPEARIQVSSINR 158
GL EAR+QV NR
Sbjct: 59 GLTEARVQVWFSNR 72
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F RT YPDV+ RE LA GL EAR+QV NR
Sbjct: 40 FARTQYPDVYTREELAQSTGLTEARVQVWFSNR 72
>gi|47223097|emb|CAG07184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 184
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 8 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR----- 62
Query: 164 AAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
K ++ + TS ++D + FN P P+ P +P +P +PIS
Sbjct: 63 -RAKWRRQEKMDNTSMKLHDSAMLSFN-------RPQMPPSVGPVANPMPLDPWLTSPIS 114
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR K ++ + TS ++D
Sbjct: 28 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR------RAKWRRQEKMDNTSMKLHD 81
Query: 287 KLRM-FNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P P+ P +P +P +PIS
Sbjct: 82 SAMLSFN-------RPQMPPSVGPVANPMPLDPWLTSPIS 114
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 339 QVWFSNRRAKWRREEKLRN 357
QVWF NRRAKWRR+EK+ N
Sbjct: 56 QVWFQNRRAKWRRQEKMDN 74
>gi|195035409|ref|XP_001989170.1| GH10195 [Drosophila grimshawi]
gi|193905170|gb|EDW04037.1| GH10195 [Drosophila grimshawi]
Length = 636
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 78 EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ E SD SEP + LKRK +R RT+F+ Q++ LE+ FERT YPD+F R
Sbjct: 185 DEEDLSDCESEPG----------IALKRKQRRCRTTFSASQLEELERAFERTQYPDIFTR 234
Query: 138 ERLADKIGLPEARIQVSSINRVLR 161
E LA + L EARIQV NR R
Sbjct: 235 EELAQRTNLTEARIQVWFSNRRAR 258
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERT YPD+F RE LA + L EARIQV NR R
Sbjct: 221 RAFERTQYPDIFTREELAQRTNLTEARIQVWFSNRRAR 258
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 579 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 638
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 639 VQVWFQNR 646
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 612 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 646
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
QVWF NRRAKWRR+EK + R G T
Sbjct: 640 QVWFQNRRAKWRRQEKSESLRLGLT 664
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|195380433|ref|XP_002048975.1| GJ21339 [Drosophila virilis]
gi|194143772|gb|EDW60168.1| GJ21339 [Drosophila virilis]
Length = 464
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTIHGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTSLTEARIQVWFSNRRAR 236
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFSRTQYPDVYTREELAQTTSLTEARIQVWFSNRRAR 236
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 22 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 78
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 79 VQVWFQNR 86
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 54 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 86
>gi|122892559|gb|ABM67330.1| PAX7 [Hylobates klossii]
Length = 111
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 36 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 85
Query: 127 ERTHYPDVFARERLADKIGLPEARIQ 152
ERTHYPD++ RE LA + L EAR+Q
Sbjct: 86 ERTHYPDIYTREELAQRTKLTEARVQ 111
Score = 42.7 bits (99), Expect = 0.39, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQ 255
K FERTHYPD++ RE LA + L EAR+Q
Sbjct: 83 KAFERTHYPDIYTREELAQRTKLTEARVQ 111
>gi|260810917|ref|XP_002600169.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
gi|229285455|gb|EEN56181.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
Length = 64
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +RNRT+FT++Q+ +LEK FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 1 KRKQRRNRTTFTSQQLQALEKVFERTHYPDAFVREELARRVNLSEARVQVWFQNR 55
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 21 KVFERTHYPDAFVREELARRVNLSEARVQVWFQNR 55
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 39 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 95
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 96 VQVWFQNR 103
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 71 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 103
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 271 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 329
Query: 152 QVSSINR 158
QV NR
Sbjct: 330 QVWFQNR 336
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 302 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 336
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
SS D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 25 SSGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 81
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 82 VQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|189303837|gb|ACD85822.1| paired-like homeobox Prd2 [Mnemiopsis leidyi]
Length = 308
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 19/129 (14%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
KRK +RNRT F+ Q+D LE EF+++HYPDV RE LA+ + L EAR+QV NR +
Sbjct: 48 KRKQRRNRTQFSTYQLDQLEAEFDKSHYPDVLTREELANGLDLTEARVQVWFQNRRAKWR 107
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALP----------H 213
Q+E S TS + R+ +G P YP PT P + +P +
Sbjct: 108 KKQREADMSNAGATS----NVNRLISGLP--TEYP---PTAEPWSMNIPTISHSIPTSHY 158
Query: 214 NPGSVTPIS 222
+ GSV P S
Sbjct: 159 SFGSVVPYS 167
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
Query: 228 EFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 287
EF+++HYPDV RE LA+ + L EAR+QV NR + Q+E S TS +
Sbjct: 69 EFDKSHYPDVLTREELANGLDLTEARVQVWFQNRRAKWRKKQREADMSNAGATS----NV 124
Query: 288 LRMFNGQPGWAWYPGSTPTPSPAHLALP----------HNPGSVTPIS 325
R+ +G P YP PT P + +P ++ GSV P S
Sbjct: 125 NRLISGLP--TEYP---PTAEPWSMNIPTISHSIPTSHYSFGSVVPYS 167
>gi|308497871|ref|XP_003111122.1| CRE-CEH-8 protein [Caenorhabditis remanei]
gi|308240670|gb|EFO84622.1| CRE-CEH-8 protein [Caenorhabditis remanei]
Length = 283
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 12/116 (10%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
+K +RNRT+FT Q+ +LE F+++HYPDV+ARE LA K+ LPE R+QV NR R
Sbjct: 66 KKQRRNRTTFTTYQLHALEAAFDKSHYPDVYARETLASKVSLPEVRVQVWFQNR--RAKF 123
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALPHNPGS 217
++E+Q S +K + + P W+W TP P+ +L HN G+
Sbjct: 124 RRQEKQDSQGE-------EKPSLKDSMPSWSWMSENKTETPPMLPSANSLTHNNGN 172
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F+++HYPDV+ARE LA K+ LPE R+QV NR R ++E+Q S +K
Sbjct: 87 FDKSHYPDVYARETLASKVSLPEVRVQVWFQNR--RAKFRRQEKQDSQGE-------EKP 137
Query: 289 RMFNGQPGWAWY---PGSTPTPSPAHLALPHNPGS 320
+ + P W+W TP P+ +L HN G+
Sbjct: 138 SLKDSMPSWSWMSENKTETPPMLPSANSLTHNNGN 172
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 30 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 85
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 53 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 85
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R
Sbjct: 542 SGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVR 601
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 602 VQVWFQNR 609
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 575 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 609
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 68/181 (37%), Gaps = 34/181 (18%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK + R G T + + V P SPP S LP
Sbjct: 603 QVWFQNRRAKWRRQEKSESLRLGLTHFTQLPHRLGCGASGLPVDPW-LSPPLLSALP--- 658
Query: 399 GGF--NPSSMY-SSIPQPAGMDSYNPSCLQQAAREHHH----------------HSSYSY 439
GF +P ++Y S + P + N + AA HHH
Sbjct: 659 -GFLSHPQTVYPSYLTPPLSLAPGNLTMSSLAAMGHHHAHNGPPPPHVGHGGHGQPQPPP 717
Query: 440 MFHDSLHSLQSAYQRAAPAAHSSPH-----PHPA-----HPGSSPYGTSNSVNGPPTSTG 489
P +H SPH PH H G +P GT + PP+ST
Sbjct: 718 PPPPHGVPHPHGSHHVVPLSHLSPHLSRMSPHATSLGSPHHGVTPLGTPLHSSLPPSSTA 777
Query: 490 T 490
T
Sbjct: 778 T 778
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 216 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 274
Query: 152 QVSSINR 158
QV NR
Sbjct: 275 QVWFQNR 281
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 247 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 281
>gi|195114566|ref|XP_002001838.1| GI14821 [Drosophila mojavensis]
gi|193912413|gb|EDW11280.1| GI14821 [Drosophila mojavensis]
Length = 617
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D +S+ + LKRK +R RT+F+ Q++ LE+ FERT YPD+F RE LA + L EARIQ
Sbjct: 189 SDCESEPGIALKRKQRRCRTTFSAAQLEELERAFERTQYPDIFTREELAQRTNLTEARIQ 248
Query: 153 VSSINRVLR 161
V NR R
Sbjct: 249 VWFSNRRAR 257
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 48/174 (27%)
Query: 118 QIDSLEKEFERTHYPDVFA--------RERLADKIGLPEARIQVSSINRVLRNLAAQKEQ 169
+I+S +E++RT+ P +F+ RE D+ +P VS+I+R++R A E
Sbjct: 105 EIESRIEEYKRTN-PGMFSWEIREKLIREGFCDRSMVPS----VSAISRLVRGRDAAAEA 159
Query: 170 QA----------------SAHNQTSETVYDKLRMFNGQPGWAWYPG---STPTPSPAHLA 210
+ S HN+ ++ D++ +PG A T S A L
Sbjct: 160 DSAKPSSNSNNSDQCGSNSTHNKATD---DEVSDCESEPGIALKRKQRRCRTTFSAAQL- 215
Query: 211 LPHNPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ + FERT YPD+F RE LA + L EARIQV NR R
Sbjct: 216 ------------EELERAFERTQYPDIFTREELAQRTNLTEARIQVWFSNRRAR 257
>gi|51979090|gb|AAU20320.1| retinal homeobox [Platynereis dumerilii]
Length = 304
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKE 125
G ++ + D ES D+ + + + + M K+K +RNRT+FT Q+ LE+
Sbjct: 77 GGLSSGAEDLNDSGESIGDVATHSDCESGGEGDMG---KKKHRRNRTTFTTYQLHELERA 133
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FE++HYPDV++RE LA KI LPE R+QV NR
Sbjct: 134 FEKSHYPDVYSREELALKINLPEVRVQVWFQNR 166
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 160 QVWFQNRRAKWRRQEKL 176
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
+ ++A + SD P +D + KRK +RNRT+FT+ Q++ +EK F+RTHY
Sbjct: 83 TNNNAGANGKGSDDVKSPMGDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHY 142
Query: 132 PDVFARERLADKIGLPEARIQVSSINR 158
PDV+ RE+LA + L EAR+QV NR
Sbjct: 143 PDVYCREQLALRCDLTEARVQVWFQNR 169
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 135 KVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 169
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 130 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 188
Query: 152 QVSSINR 158
QV NR
Sbjct: 189 QVWFQNR 195
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 161 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 195
>gi|224080279|ref|XP_002189321.1| PREDICTED: paired box protein Pax-7-like, partial [Taeniopygia
guttata]
gi|327292272|ref|XP_003230844.1| PREDICTED: paired box protein Pax-7-like, partial [Anolis
carolinensis]
gi|120974931|gb|ABM46764.1| PAX7 [Gorilla gorilla]
gi|121484047|gb|ABM54349.1| PAX7 [Pan paniscus]
gi|339791146|gb|AEK12234.1| transcription factor pax7 [Bos taurus]
gi|339791148|gb|AEK12235.1| transcription factor pax7 [Bos taurus]
Length = 66
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 10/70 (14%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK FERTHYPD++ RE LA
Sbjct: 7 SDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 56
Query: 143 KIGLPEARIQ 152
+ L EAR+Q
Sbjct: 57 RTKLTEARVQ 66
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQ 255
K FERTHYPD++ RE LA + L EAR+Q
Sbjct: 38 KAFERTHYPDIYTREELAQRTKLTEARVQ 66
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 35 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 90
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 58 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 90
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 75 DAKEHESTSDINSEPNSSADE------DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFER 128
DA+E+ + NS S +E D K+K +RNRT+FT Q+ LE+ FE+
Sbjct: 53 DAQENTGENSCNSTGGGSDEELGAGCGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEK 112
Query: 129 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 188
+HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE + M
Sbjct: 113 SHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHHPANMR 169
Query: 189 N------GQPGWAWY-PGSTPTPSPAHLALPH 213
N G PG W P + P LA PH
Sbjct: 170 NVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 201
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE +
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHH 164
Query: 287 KLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 316
M N G PG W P + P LA PH
Sbjct: 165 PANMRNVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 201
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWF NRRAKWRR+EK+ R G
Sbjct: 136 QVWFQNRRAKWRRQEKMEAARLG 158
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 42/56 (75%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q++ LE F RTHYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 LRRKQRRNRTTFTAQQLEELESAFGRTHYPDVFTREDLAVKINLTEARVQVWFQNR 107
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F RTHYPDVF RE LA KI L EAR+QV NR
Sbjct: 75 FGRTHYPDVFTREDLAVKINLTEARVQVWFQNR 107
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 318 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 376
Query: 152 QVSSINR 158
QV NR
Sbjct: 377 QVWFQNR 383
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 349 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 383
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 277 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 335
Query: 152 QVSSINR 158
QV NR
Sbjct: 336 QVWFQNR 342
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 308 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 342
>gi|156387437|ref|XP_001634210.1| predicted protein [Nematostella vectensis]
gi|156221290|gb|EDO42147.1| predicted protein [Nematostella vectensis]
gi|295389204|gb|ADG03432.1| retinal homeobox [Nematostella vectensis]
Length = 266
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 13/100 (13%)
Query: 84 DINSEPNSS--------ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
DINS+ + S AD DS K+KL+RNRT+FT Q+ LE+ FE++HYPDV+
Sbjct: 59 DINSDNDLSSNDGKSDEADGDSS-----KKKLRRNRTTFTTFQLHELERAFEKSHYPDVY 113
Query: 136 ARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
RE LA KI LPE R+QV N+ + +K + AS +
Sbjct: 114 TREELALKISLPEVRVQVWFQNKRAKWRREEKMEMASLQD 153
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
FE++HYPDV+ RE LA KI LPE R+QV N+ + +K + AS +
Sbjct: 104 FEKSHYPDVYTREELALKISLPEVRVQVWFQNKRAKWRREEKMEMASLQD 153
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF N+RAKWRREEK+
Sbjct: 130 QVWFQNKRAKWRREEKM 146
>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
Length = 884
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++S+ + S +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE L
Sbjct: 527 NSSEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL 586
Query: 141 ADKIGLPEARIQVSSINR 158
A K+ LPE R+QV NR
Sbjct: 587 AMKVNLPEVRVQVWFQNR 604
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 570 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 604
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGST 363
QVWF NRRAKWRR+EK + R G T
Sbjct: 598 QVWFQNRRAKWRRQEKSESLRLGLT 622
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 261 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 319
Query: 152 QVSSINR 158
QV NR
Sbjct: 320 QVWFQNR 326
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 292 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 326
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 314 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 372
Query: 152 QVSSINR 158
QV NR
Sbjct: 373 QVWFQNR 379
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 345 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 379
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR R
Sbjct: 20 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR--RA 77
Query: 163 LAAQKEQQASAHNQTSETVYD 183
+ E+ AS + ET+ +
Sbjct: 78 KWRKTERGASDQEGSKETMAE 98
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
F +THYPDVF RE LA KI L EAR+QV NR R + E+ AS + ET+ +
Sbjct: 43 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR--RAKWRKTERGASDQEGSKETMAE 98
>gi|405969514|gb|EKC34482.1| Aristaless-related homeobox protein [Crassostrea gigas]
Length = 376
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 67 SVTPISRDDAKEHES----TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
S+ I R KE ES TSD + P S+ E L K +RNRT+F+ +Q+ L
Sbjct: 58 SICNILRLPDKERESNHPKTSD-SCLPIISSTEHKTSDLASSIKSKRNRTTFSTKQLQEL 116
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EK F +THYPDVF RE+LA KI LPE+RIQV NR
Sbjct: 117 EKVFRKTHYPDVFLREKLASKIKLPESRIQVWFQNR 152
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F +THYPDVF RE+LA KI LPE+RIQV NR
Sbjct: 118 KVFRKTHYPDVFLREKLASKIKLPESRIQVWFQNR 152
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 314 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 372
Query: 152 QVSSINR 158
QV NR
Sbjct: 373 QVWFQNR 379
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 345 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 379
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 50/76 (65%), Gaps = 7/76 (9%)
Query: 85 INSEPNSSAD--EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
IN P+S ++ EDS KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA
Sbjct: 191 INDRPSSCSNSPEDSG-----KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQ 245
Query: 143 KIGLPEARIQVSSINR 158
++ L EAR+QV NR
Sbjct: 246 RVILTEARVQVWFQNR 261
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA ++ L EAR+QV NR
Sbjct: 227 KVFARTHYPDVFTREELAQRVILTEARVQVWFQNR 261
>gi|297278622|ref|XP_001098052.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-like
[Macaca mulatta]
gi|355557967|gb|EHH14747.1| hypothetical protein EGK_00718 [Macaca mulatta]
gi|355745257|gb|EHH49882.1| hypothetical protein EGM_00614 [Macaca fascicularis]
Length = 382
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 129 KQRSLQKEQLQKQKEAEGSHGEDKAEAPTPDTQLDTDQP--PHLPGSNP-PAELHLSL 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 148 HGEDKAEAPTPDTQLDTDQP--PHLPGSNP-PAELHLSL 183
>gi|402854421|ref|XP_003891868.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Papio
anubis]
Length = 377
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 124 KQRSLQKEQLQKQKEAEGSHGEDKAEAPTPDTQLDTDQP--PHLPGSNP-PAELHLSL 178
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 143 HGEDKAEAPTPDTQLDTDQP--PHLPGSNP-PAELHLSL 178
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 382 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 440
Query: 152 QVSSINR 158
QV NR
Sbjct: 441 QVWFQNR 447
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 413 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 447
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 278 SAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 336
Query: 152 QVSSINRVLRNLAAQKEQQASAHNQTS 178
QV NR + +K ++A A TS
Sbjct: 337 QVWFQNRRAK---WRKREKAGAQTHTS 360
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ F++THYPDVF RE LA ++ L EAR+QV NR + +K ++A A TS
Sbjct: 309 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAK---WRKREKAGAQTHTS 360
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 61 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 75 DAKEHESTSDINSEPNSSADE------DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFER 128
DA+E+ + NS S +E D K+K +RNRT+FT Q+ LE+ FE+
Sbjct: 53 DAQENAGENSCNSTGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEK 112
Query: 129 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 188
+HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE + M
Sbjct: 113 SHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHHPGNMR 169
Query: 189 N------GQPGWAWY-PGSTPTPSPAHLALPH 213
N G PG W P + P LA PH
Sbjct: 170 NVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 201
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE +
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHH 164
Query: 287 KLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 316
M N G PG W P + P LA PH
Sbjct: 165 PGNMRNVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 201
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWF NRRAKWRR+EK+ R G
Sbjct: 136 QVWFQNRRAKWRRQEKMEAARLG 158
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 68 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 123
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 91 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 123
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|345784350|ref|XP_852642.2| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Canis
lupus familiaris]
Length = 288
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 44/54 (81%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSIN 157
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+Q+S+++
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQISNVS 186
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSIN 260
+ FE++HYPDV++RE LA K+ LPE R+Q+S+++
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQISNVS 186
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 75 DAKEHESTSDINSEPNSSADE------DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFER 128
DA+E+ + NS S +E D K+K +RNRT+FT Q+ LE+ FE+
Sbjct: 53 DAQENTGENSCNSTGGGSDEELGAGCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEK 112
Query: 129 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 188
+HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE + M
Sbjct: 113 SHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHHPGNMR 169
Query: 189 N------GQPGWAWY-PGSTPTPSPAHLALPH 213
N G PG W P + P LA PH
Sbjct: 170 NVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 201
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE +
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHH 164
Query: 287 KLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 316
M N G PG W P + P LA PH
Sbjct: 165 PGNMRNVAGPALGLPGDPWLTPPGLLSALPGFLAAPH 201
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWF NRRAKWRR+EK+ R G
Sbjct: 136 QVWFQNRRAKWRRQEKMEAARLG 158
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 326 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 384
Query: 152 QVSSINR 158
QV NR
Sbjct: 385 QVWFQNR 391
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 357 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 391
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 61 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
>gi|353232111|emb|CCD79466.1| putative paired box protein pax-6 [Schistosoma mansoni]
Length = 1258
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
R+RTSF+N Q++ LEKEFE THYPDVF+RE+L+ +I LPE RIQV
Sbjct: 987 RSRTSFSNLQLEELEKEFEHTHYPDVFSREKLSSRILLPETRIQV 1031
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
KEFE THYPDVF+RE+L+ +I LPE RIQV
Sbjct: 1002 KEFEHTHYPDVFSREKLSSRILLPETRIQV 1031
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 329 AKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGS 362
++ L+ ++ QVWFSNRRAKWRREEK+R ++ S
Sbjct: 1020 SRILLPETRIQVWFSNRRAKWRREEKMRMKQLAS 1053
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 34 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 89
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 71 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 126
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 94 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 126
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 132 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 190
Query: 152 QVSSINR 158
QV NR
Sbjct: 191 QVWFQNR 197
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 163 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 197
>gi|321453987|gb|EFX65178.1| hypothetical protein DAPPUDRAFT_9094 [Daphnia pulex]
Length = 76
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SDI SEP + LKRK +R+RT+F+ EQ++ LE+ FERT YPDV+ RE LA
Sbjct: 3 SDIESEPGIT----------LKRKQRRSRTTFSAEQLEELERSFERTQYPDVYTREELAQ 52
Query: 143 KIGLPEARIQVSSINR 158
K L EAR+QV NR
Sbjct: 53 KTKLTEARVQVWFSNR 68
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FERT YPDV+ RE LA K L EAR+QV NR
Sbjct: 36 FERTQYPDVYTREELAQKTKLTEARVQVWFSNR 68
>gi|256084136|ref|XP_002578288.1| paired box protein pax-6 [Schistosoma mansoni]
Length = 307
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 41/50 (82%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
R+RTSF+N Q++ LEKEFE THYPDVF+RE+L+ +I LPE RIQV NR
Sbjct: 36 RSRTSFSNLQLEELEKEFEHTHYPDVFSREKLSSRILLPETRIQVWFSNR 85
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 28/35 (80%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFE THYPDVF+RE+L+ +I LPE RIQV NR
Sbjct: 51 KEFEHTHYPDVFSREKLSSRILLPETRIQVWFSNR 85
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 329 AKGLVQQSARQVWFSNRRAKWRREEKLRNQRRGS 362
++ L+ ++ QVWFSNRRAKWRREEK+R ++ S
Sbjct: 69 SRILLPETRIQVWFSNRRAKWRREEKMRMKQLAS 102
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 61 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN 370
QVWF NRRAKWR+ E+ +++ G +N N
Sbjct: 87 QVWFQNRRAKWRKTERGTSEQDGGKEQMNEGN 118
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 261 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 319
Query: 152 QVSSINR 158
QV NR
Sbjct: 320 QVWFQNR 326
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 292 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 326
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 38 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 61 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 93
>gi|196010814|ref|XP_002115271.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
gi|190582042|gb|EDV22116.1| hypothetical protein TRIADDRAFT_29410 [Trichoplax adhaerens]
Length = 400
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+L+ KL+RNRT FT+EQI LE F+ T YPDV+ RE LA KIGL EAR+QV NR
Sbjct: 226 LKLQ-KLRRNRTMFTDEQIKKLEDIFKSTQYPDVYTREELASKIGLSEARVQVWFSNR 282
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ T YPDV+ RE LA KIGL EAR+QV NR
Sbjct: 250 FKSTQYPDVYTREELASKIGLSEARVQVWFSNR 282
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
Query: 339 QVWFSNRRAKWRREEKLRN----QRRGSTGSVNSANTTTSTT 376
QVWFSNRRAKWR+E K R+ GST NS +T +S +
Sbjct: 276 QVWFSNRRAKWRKEGKHRSPSKLSNDGSTTLFNSKSTNSSVS 317
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 176 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 234
Query: 152 QVSSINR 158
QV NR
Sbjct: 235 QVWFQNR 241
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 207 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 241
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 31 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 86
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 54 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 86
>gi|340386324|ref|XP_003391658.1| PREDICTED: aristaless-related homeobox protein-like, partial
[Amphimedon queenslandica]
Length = 195
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 6/127 (4%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D +E SD S+ NS+ D+D++ +K +R RT+++N Q+D LE F THY
Sbjct: 21 SDDRGEEDYGPSDEESDSNSTTDKDAE-----PKKPKRTRTAYSNSQLDQLELIFATTHY 75
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ 191
PDVF RE L+ ++G+ E RIQV NR R ++ S ++ + +KL+ N
Sbjct: 76 PDVFTREDLSRRLGIREDRIQVWFQNRRARFRKQERTGSISCRSRYRQKRLEKLQH-NFM 134
Query: 192 PGWAWYP 198
P A YP
Sbjct: 135 PSSAGYP 141
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F THYPDVF RE L+ ++G+ E RIQV NR R ++ S ++ + +KL
Sbjct: 70 FATTHYPDVFTREDLSRRLGIREDRIQVWFQNRRARFRKQERTGSISCRSRYRQKRLEKL 129
Query: 289 RMFNGQPGWAWYP 301
+ N P A YP
Sbjct: 130 QH-NFMPSSAGYP 141
>gi|56694806|gb|AAW23065.1| Rx, partial [Oikopleura dioica]
Length = 156
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S S I +P A+E S K+K +RNRT+FT Q+ LE+ FE++HYPDV+ARE L
Sbjct: 23 SISSILLKPEK-AEEQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREEL 81
Query: 141 ADKIGLPEARIQVSSINR 158
A KI LPE R+QV NR
Sbjct: 82 ATKISLPEVRVQVWFQNR 99
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FE++HYPDV+ARE LA KI LPE R+QV NR
Sbjct: 67 FEKSHYPDVYAREELATKISLPEVRVQVWFQNR 99
>gi|313234331|emb|CBY10398.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S S I +P A+E S K+K +RNRT+FT Q+ LE+ FE++HYPDV+ARE L
Sbjct: 107 SISSILLKPEK-AEEQSLFAKEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREEL 165
Query: 141 ADKIGLPEARIQVSSINR 158
A KI LPE R+QV NR
Sbjct: 166 ATKISLPEVRVQVWFQNR 183
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV+ARE LA KI LPE R+QV NR
Sbjct: 149 RAFEKSHYPDVYAREELATKISLPEVRVQVWFQNR 183
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 177 QVWFQNRRAKWRRQEKV 193
>gi|348504630|ref|XP_003439864.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Oreochromis niloticus]
Length = 400
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYD 183
L QKE Q +A T ++ D
Sbjct: 129 KQRSLQKEQLQKQKETQGAAEGATEDSKND 158
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE Q +
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKETQGA 147
Query: 276 AHNQTSETVYD 286
A T ++ D
Sbjct: 148 AEGATEDSKND 158
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 322 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 380
Query: 152 QVSSINR 158
QV NR
Sbjct: 381 QVWFQNR 387
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 353 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 387
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 316 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 374
Query: 152 QVSSINR 158
QV NR
Sbjct: 375 QVWFQNR 381
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 347 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 381
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like [Oryctolagus
cuniculus]
Length = 269
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 35 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 90
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 58 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 90
>gi|449279931|gb|EMC87364.1| Dorsal root ganglia homeobox protein [Columba livia]
Length = 261
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 206 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 264
Query: 152 QVSSINR 158
QV NR
Sbjct: 265 QVWFQNR 271
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 237 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 271
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 71 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 126
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 94 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 126
>gi|443683851|gb|ELT87953.1| hypothetical protein CAPTEDRAFT_174285 [Capitella teleta]
Length = 368
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
AD + R RK +R+RT+FTN+Q+ +LEK F +THYPDV RERLA LPEARIQ
Sbjct: 90 ADIILEARYGSHRKQRRSRTAFTNQQLAALEKTFSKTHYPDVVMRERLAMMTNLPEARIQ 149
Query: 153 VSSINRVLRNLAAQKEQQ 170
V NR + Q+ Q+
Sbjct: 150 VWFKNRRAKFRKKQRAQK 167
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
K F +THYPDV RERLA LPEARIQV NR + Q+ Q+
Sbjct: 121 KTFSKTHYPDVVMRERLAMMTNLPEARIQVWFKNRRAKFRKKQRAQK 167
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens mutus]
Length = 257
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 23 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 78
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 46 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 78
>gi|348504628|ref|XP_003439863.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Oreochromis niloticus]
Length = 395
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYD 183
L QKE Q +A T ++ D
Sbjct: 124 KQRSLQKEQLQKQKETQGAAEGATEDSKND 153
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 11/71 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE Q +
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKETQGA 142
Query: 276 AHNQTSETVYD 286
A T ++ D
Sbjct: 143 AEGATEDSKND 153
>gi|67527267|gb|AAY68376.1| PaxB, partial [Trichoplax adhaerens]
Length = 318
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 22/165 (13%)
Query: 3 VSSINRVLRN--LAAQK-------EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPP 53
VSSINR++R+ L+A K +Q++ + + ++ G
Sbjct: 121 VSSINRIVRSKVLSAYKYNDGNHSRKQSALSTGVEASCHYRINDLLG------------I 168
Query: 54 PSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTS 113
P P ++ H + + I +DA ++ ++ SS + L+L+ KL+RNRT
Sbjct: 169 PQPQTSSVGHYKTANSSIQANDAGLVNDYTNKSNLIYSSKMDHQAADLKLQ-KLRRNRTM 227
Query: 114 FTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FT+EQI LE F+ T YPDV+ RE LA KIGL EAR+QV NR
Sbjct: 228 FTDEQIKKLEDIFKSTQYPDVYTREELASKIGLSEARVQVWFSNR 272
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ T YPDV+ RE LA KIGL EAR+QV NR
Sbjct: 240 FKSTQYPDVYTREELASKIGLSEARVQVWFSNR 272
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR----GSTGSVNSANTTTSTT 376
QVWFSNRRAKWR+E K R+ + GST NS +T +S +
Sbjct: 266 QVWFSNRRAKWRKEGKHRSPSKLSNDGSTTLFNSKSTNSSVS 307
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 64 NPGSVTPISRDDAKEHESTSDI--NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
N S T + + E +S D+ + + N E S KRK +RNRT+FT+ Q+D
Sbjct: 60 NNNSNTEEDKLEQDEVDSKGDLISDQDENKEGTEQSDTSDSSKRKKRRNRTTFTSFQLDE 119
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+EK F+RTHYPDV++RE+LA + L EAR+QV NR
Sbjct: 120 MEKVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNR 156
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV++RE+LA + L EAR+QV NR
Sbjct: 122 KVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNR 156
>gi|395730561|ref|XP_002810927.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Pongo
abelii]
Length = 377
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 124 KQRTLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRTLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 143 HGEGKAEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 64 NPGSVTPISRDDAKEHESTSDI--NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDS 121
N S T + + E +S D+ + + N E S KRK +RNRT+FT+ Q+D
Sbjct: 60 NNNSNTEEDKLEQDEVDSKGDLISDQDENKEGTEQSDTSDSSKRKKRRNRTTFTSFQLDE 119
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+EK F+RTHYPDV++RE+LA + L EAR+QV NR
Sbjct: 120 MEKVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNR 156
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV++RE+LA + L EAR+QV NR
Sbjct: 122 KVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNR 156
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|170576749|ref|XP_001893749.1| Homeobox domain containing protein [Brugia malayi]
gi|158600048|gb|EDP37405.1| Homeobox domain containing protein [Brugia malayi]
Length = 224
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 100 RLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRV 159
R R +K +RNRT+FT Q+ LE+ FER HYPDV+ARE LA K+ LPE R+QV NR
Sbjct: 43 RDRESKKQRRNRTTFTTFQLHELEQAFERCHYPDVYARELLAQKVKLPEVRVQVWFQNR- 101
Query: 160 LRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW 196
A+ +Q A + + G P WAW
Sbjct: 102 ----RAKWRRQDKAESSAIADLPPVRHSTPGIPSWAW 134
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
FER HYPDV+ARE LA K+ LPE R+QV NR A+ +Q A + +
Sbjct: 69 FERCHYPDVYARELLAQKVKLPEVRVQVWFQNR-----RAKWRRQDKAESSAIADLPPVR 123
Query: 289 RMFNGQPGWAW 299
G P WAW
Sbjct: 124 HSTPGIPSWAW 134
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 21/80 (26%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPP--PSSRLPL 396
QVWF NRRAKWRR++K ++A+ +PP S P PS
Sbjct: 95 QVWFQNRRAKWRRQDK------------------AESSAIADLPPVRHSTPGIPSWAWMT 136
Query: 397 NPGGFNPSSMYSSIPQPAGM 416
+P F+ M+ +PQP G+
Sbjct: 137 HPDDFS-GLMHPFVPQPNGL 155
>gi|403291750|ref|XP_003936930.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 124 KQRSLQKEQLQKQKEAEGSHGEGKTEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 143 HGEGKTEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D E D P ++A+E+ K+K +RNRT+FT Q+ LE+ FE++HYPDV
Sbjct: 9 DLGELRKPGDSEGTPPAAAEEEQP-----KKKHRRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 135 FARERLADKIGLPEARIQVSSINR 158
++RE LA K+ LPE R+QV NR
Sbjct: 64 YSREELAMKVNLPEVRVQVWFQNR 87
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 53 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 87
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK+ S+ ++ T + + P T+ P S+ LPL+P
Sbjct: 81 QVWFQNRRAKWRRQEKM----EASSMKLHD----TPMLSFNRPPMTANVGPMSNSLPLDP 132
Query: 399 GGFNPSS 405
+P S
Sbjct: 133 WLTSPIS 139
>gi|332808875|ref|XP_524575.3| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan troglodytes]
gi|397483203|ref|XP_003812793.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan paniscus]
Length = 377
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 124 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 143 HGEGKAEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 178
>gi|340724400|ref|XP_003400570.1| PREDICTED: hypothetical protein LOC100651262 [Bombus terrestris]
gi|350397686|ref|XP_003484956.1| PREDICTED: hypothetical protein LOC100748675 [Bombus impatiens]
Length = 251
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S ED Q KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I L EAR
Sbjct: 78 SPGSEDRQSTGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEAR 137
Query: 151 IQVSSINRVLRNLAAQKEQQASAH 174
+QV NR + +K+ + + H
Sbjct: 138 VQVWFQNRRAKWRKQEKQCKVTTH 161
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 277
+ F++THYPDVF RE LA +I L EAR+QV NR + +K+ + + H
Sbjct: 111 RAFQKTHYPDVFFREELALRIQLTEARVQVWFQNRRAKWRKQEKQCKVTTH 161
>gi|324519356|gb|ADY47358.1| Retinal homeobox protein Rx [Ascaris suum]
Length = 250
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 85 INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
+ EP D DS +K +RNRT+FT Q+ LE+ FE+ HYPDV+ARE LA K+
Sbjct: 77 VQPEPTKRRDRDS-------KKQRRNRTTFTTFQLHELEQAFEKCHYPDVYARELLAQKV 129
Query: 145 GLPEARIQVSSINR 158
LPE R+QV NR
Sbjct: 130 KLPEVRVQVWFQNR 143
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FE+ HYPDV+ARE LA K+ LPE R+QV NR
Sbjct: 111 FEKCHYPDVYARELLAQKVKLPEVRVQVWFQNR 143
>gi|431915726|gb|ELK16059.1| Homeobox protein aristaless-like 4 [Pteropus alecto]
Length = 195
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QVS ++ V R
Sbjct: 126 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVSGVSGVGR 183
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K F++THYPDV+ARE+LA + L EAR+QVS ++ V R
Sbjct: 146 KVFQKTHYPDVYAREQLAMRTDLTEARVQVSGVSGVGR 183
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 53 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 108
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 76 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 108
>gi|332808877|ref|XP_003308127.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Pan troglodytes]
gi|397483205|ref|XP_003812794.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Pan paniscus]
Length = 382
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 129 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 183
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 148 HGEGKAEAPTPDTQLDTDQP--PRLPGSDP-PAELHLSL 183
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD P S DE K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 125 SDEGKSPEPSKDEQP------KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 178
Query: 143 KIGLPEARIQVSSINR 158
K+ LPE R+QV NR
Sbjct: 179 KVNLPEVRVQVWFQNR 194
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 160 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 194
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 188 QVWFQNRRAKWRRQEKM 204
>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
Length = 298
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
+K S +S + S DE + + +R RT+FT+EQI+ LEK FE+THYPDVF
Sbjct: 187 SKRKYSVDSADSTGSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVF 246
Query: 136 ARERLADKIGLPEARIQVSSINR 158
RE LA ++ L EARIQV NR
Sbjct: 247 TREELAQQVNLSEARIQVWFSNR 269
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FE+THYPDVF RE LA ++ L EARIQV NR
Sbjct: 235 KVFEKTHYPDVFTREELAQQVNLSEARIQVWFSNR 269
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 43/55 (78%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 114 KRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 168
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 134 KVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 168
>gi|383854569|ref|XP_003702793.1| PREDICTED: paired mesoderm homeobox protein 2-like [Megachile
rotundata]
Length = 250
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S ED Q KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I L EAR
Sbjct: 78 SPGSEDRQSSGVGKRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEAR 137
Query: 151 IQVSSINRVLRNLAAQKEQQASAH 174
+QV NR + +K+ + + H
Sbjct: 138 VQVWFQNRRAKWRKQEKQCKVTTH 161
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 277
+ F++THYPDVF RE LA +I L EAR+QV NR + +K+ + + H
Sbjct: 111 RAFQKTHYPDVFFREELALRIQLTEARVQVWFQNRRAKWRKQEKQCKVTTH 161
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 64/104 (61%), Gaps = 13/104 (12%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+S D++E+ S SD + P DE+ KRK +R RT+F+ Q+D LEK F RTH
Sbjct: 91 VSALDSRENGSPSDGTNSP----DENG------KRKQRRYRTTFSAFQLDELEKVFARTH 140
Query: 131 YPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 174
YPDVF RE LA ++ L EAR+QV NR + +K++++S H
Sbjct: 141 YPDVFTREELATRVQLTEARVQVWFQNRRAK---YRKQERSSTH 181
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 277
K F RTHYPDVF RE LA ++ L EAR+QV NR + +K++++S H
Sbjct: 134 KVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAK---YRKQERSSTH 181
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR R
Sbjct: 88 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAK 145
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 213
++E+ +A SE + M N G PG W P + P LA PH
Sbjct: 146 WRRQEKMEAARLGLSE-YHHAANMRNVAGPALGLPGDPWLAPPGLLSALPGFLAAPH 201
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR R ++E+ +A SE +
Sbjct: 108 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR--RAKWRRQEKMEAARLGLSE-YHH 164
Query: 287 KLRMFN------GQPGWAWY-PGSTPTPSPAHLALPH 316
M N G PG W P + P LA PH
Sbjct: 165 AANMRNVAGPALGLPGDPWLAPPGLLSALPGFLAAPH 201
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSAN 370
QVWF NRRAKWRR+EK+ R G + ++AN
Sbjct: 136 QVWFQNRRAKWRRQEKMEAARLGLSEYHHAAN 167
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 18 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 73
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 41 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 73
>gi|410054957|ref|XP_003953745.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 301
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ R E STSD +S+ D + L KRK +R+RT FT Q++ LEK F H
Sbjct: 129 LGRQKCSESVSTSDEDSQSEDRNDLKASPTLG-KRKKRRHRTVFTAHQLEELEKAFSEAH 187
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDV+ARE LA K LPE RIQV NR
Sbjct: 188 YPDVYAREMLAVKTELPEDRIQVWFQNR 215
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNR 215
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 73 RDDAKEHESTSDINSEPNS---SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
+++ H S +D +S SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++T
Sbjct: 265 KEELMLHSSDADGKDGEDSVCLSAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKT 323
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVF RE LA ++ L EAR+QV NR
Sbjct: 324 HYPDVFTREELAMRLDLTEARVQVWFQNR 352
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 318 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 352
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
DD ++ S+ + NS D+ KRK +RNRT+FT+ Q++ +EK F+RTHYPD
Sbjct: 84 DDPDNDDARSEKDDGKNSGGDDS-------KRKKRRNRTTFTSFQLEEMEKVFQRTHYPD 136
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
V+ RE+LA + L EAR+QV NR
Sbjct: 137 VYMREQLALRCDLTEARVQVWFQNR 161
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 127 KVFQRTHYPDVYMREQLALRCDLTEARVQVWFQNR 161
>gi|71997306|ref|NP_492246.2| Protein CEH-8 [Caenorhabditis elegans]
gi|68056712|sp|Q94398.3|HM08_CAEEL RecName: Full=Homeobox protein ceh-8
gi|60222935|emb|CAB03519.2| Protein CEH-8 [Caenorhabditis elegans]
Length = 276
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
+K +RNRT+FT Q+ +LE F++THYPDV+ARE LA K+ LPE R+QV NR +
Sbjct: 58 KKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAK--- 114
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAW 196
+++++ + ++ D + P W+W
Sbjct: 115 FRRQEKQDCQGEEKHSLKDTM------PSWSW 140
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F++THYPDV+ARE LA K+ LPE R+QV NR + +++++ + ++ D +
Sbjct: 79 FDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAK---FRRQEKQDCQGEEKHSLKDTM 135
Query: 289 RMFNGQPGWAW 299
P W+W
Sbjct: 136 ------PSWSW 140
>gi|397518464|ref|XP_003829406.1| PREDICTED: visual system homeobox 1 isoform 3 [Pan paniscus]
Length = 301
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ R E STSD +S+ D + L KRK +R+RT FT Q++ LEK F H
Sbjct: 129 LGRQKCSESVSTSDEDSQSEDRNDLKASPTLG-KRKKRRHRTVFTAHQLEELEKAFSEAH 187
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDV+ARE LA K LPE RIQV NR
Sbjct: 188 YPDVYAREMLAVKTELPEDRIQVWFQNR 215
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNR 215
>gi|390465901|ref|XP_003733484.1| PREDICTED: LOW QUALITY PROTEIN: diencephalon/mesencephalon homeobox
protein 1 [Callithrix jacchus]
Length = 508
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 194 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 253
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PG P P+ HL+L
Sbjct: 254 KQRSLQKEQLQKQKEAEGSHGEGKTEAPTPDTQLDTDQP--PRLPGGDP-PAELHLSL 308
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 213 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 272
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PG P P+ HL+L
Sbjct: 273 HGEGKTEAPTPDTQLDTDQP--PRLPGGDP-PAELHLSL 308
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|21623546|dbj|BAC00920.1| PaxB [Homo sapiens]
Length = 382
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 129 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSL 183
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 148 HGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSL 183
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris gallopavo]
Length = 228
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D E D P ++A+E+ K+K +RNRT+FT Q+ LE+ FE++HYPDV
Sbjct: 9 DLGELRKPGDGEGTPPAAAEEEQP-----KKKHRRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 135 FARERLADKIGLPEARIQVSSINR 158
++RE LA K+ LPE R+QV NR
Sbjct: 64 YSREELAMKVNLPEVRVQVWFQNR 87
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 53 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 87
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK+ S+ ++ T + + P T+ P S+ LPL+P
Sbjct: 81 QVWFQNRRAKWRRQEKM----EASSMKLHD----TPMLSFNRPPMTANVGPMSNSLPLDP 132
Query: 399 GGFNPSS 405
+P S
Sbjct: 133 WLTSPIS 139
>gi|391341678|ref|XP_003745154.1| PREDICTED: aristaless-related homeobox protein-like [Metaseiulus
occidentalis]
Length = 252
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 14/95 (14%)
Query: 64 NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLE 123
+P +V+P++R E D+N +P+ RK++R+RT+FT Q+ LE
Sbjct: 55 SPPAVSPVTRSSEDERSFHDDLNDKPS--------------RKIRRSRTTFTTYQLHQLE 100
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+ FE+T YPDVF RE LA ++ L EAR+QV NR
Sbjct: 101 RAFEKTQYPDVFTREELALRLDLSEARVQVWFQNR 135
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FE+T YPDVF RE LA ++ L EAR+QV NR
Sbjct: 103 FEKTQYPDVFTREELALRLDLSEARVQVWFQNR 135
>gi|27436936|ref|NP_757379.1| diencephalon/mesencephalon homeobox protein 1 isoform a [Homo
sapiens]
gi|22085908|gb|AAM90589.1|AF398527_1 homeoprotein MBX-S [Homo sapiens]
gi|119627312|gb|EAX06907.1| diencephalon/mesencephalon homeobox 1 [Homo sapiens]
gi|261858964|dbj|BAI46004.1| diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 377
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 124 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSL 178
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 143 HGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSL 178
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 77 KEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA 136
+E E+ + E + SA D++ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF
Sbjct: 133 QEREAFLKNSEETSLSAGSDTEDGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFT 191
Query: 137 RERLADKIGLPEARIQVSSINR 158
RE LA ++ L EAR+QV NR
Sbjct: 192 REELAMRLDLTEARVQVWFQNR 213
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 179 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 213
>gi|58036765|emb|CAG30843.1| pairberry [Cupiennius salei]
Length = 211
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 6/72 (8%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
T+DI+S D DS+ + LKRK +R+RT+F+ EQ++ LEK FERT YPDV+ RE LA
Sbjct: 145 TNDIDS------DCDSEPGIPLKRKQRRSRTTFSAEQLELLEKAFERTQYPDVYTREELA 198
Query: 142 DKIGLPEARIQV 153
+ L EARIQV
Sbjct: 199 QRTKLTEARIQV 210
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
K FERT YPDV+ RE LA + L EARIQV
Sbjct: 181 KAFERTQYPDVYTREELAQRTKLTEARIQV 210
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 73 RDDAKEHESTSDINSEPNS---SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
+++ H S +D +S SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++T
Sbjct: 257 KEELMLHSSDADGKDGEDSVCLSAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKT 315
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVF RE LA ++ L EAR+QV NR
Sbjct: 316 HYPDVFTREELAMRLDLTEARVQVWFQNR 344
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 310 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 344
>gi|224052522|ref|XP_002187168.1| PREDICTED: dorsal root ganglia homeobox protein [Taeniopygia
guttata]
Length = 261
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
L+RK +RNRT+FT +Q+++LE F +THYPDVF +E LA KI L EAR+QV NR R
Sbjct: 29 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTKEELALKINLTEARVQVWFQNR--RA 86
Query: 163 LAAQKEQQASAHNQTSETVYD 183
+ E+ AS + ET+ +
Sbjct: 87 KWRKTERGASDQEGSKETMAE 107
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
F +THYPDVF +E LA KI L EAR+QV NR R + E+ AS + ET+ +
Sbjct: 52 FAQTHYPDVFTKEELALKINLTEARVQVWFQNR--RAKWRKTERGASDQEGSKETMAE 107
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
A DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+Q
Sbjct: 1 AGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 59
Query: 153 VSSINR 158
V NR
Sbjct: 60 VWFQNR 65
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 31 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 65
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P + ED+++ K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA K+ LPE
Sbjct: 21 PGTPEGEDNELP---KKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPE 77
Query: 149 ARIQVSSINR 158
R+QV NR
Sbjct: 78 VRVQVWFQNR 87
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FER+HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 53 RAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNR 87
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 81 QVWFQNRRAKWRRQEKL 97
>gi|296238182|ref|XP_002764056.1| PREDICTED: short stature homeobox protein-like, partial [Callithrix
jacchus]
Length = 259
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 9/72 (12%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D+ SE DED Q++L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ +
Sbjct: 105 DVKSE-----DEDGQVKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQR 155
Query: 144 IGLPEARIQVSS 155
+GL EAR+QV +
Sbjct: 156 LGLSEARVQVGT 167
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSS 258
F+ THYPD F RE L+ ++GL EAR+QV +
Sbjct: 138 FDETHYPDAFMREELSQRLGLSEARVQVGT 167
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Query: 73 RDDAKEHESTSDINSEPNS---SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
+++ H S +D +S SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++T
Sbjct: 257 KEELMLHSSDADGKDGEDSVCLSAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKT 315
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDVF RE LA ++ L EAR+QV NR
Sbjct: 316 HYPDVFTREELAMRLDLTEARVQVWFQNR 344
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 310 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 344
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 91 SSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 150
S+ D D L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR
Sbjct: 20 STGDFDDGF---LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEAR 76
Query: 151 IQVSSINR 158
+QV NR
Sbjct: 77 VQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|22218349|ref|NP_671725.1| diencephalon/mesencephalon homeobox protein 1 isoform b [Homo
sapiens]
gi|74762571|sp|Q8NFW5.1|DMBX1_HUMAN RecName: Full=Diencephalon/mesencephalon homeobox protein 1;
AltName: Full=Orthodenticle homolog 3; AltName:
Full=Paired-like homeobox protein DMBX1
gi|22085911|gb|AAM90590.1|AF398528_1 homeoprotein MBX-L [Homo sapiens]
gi|162318062|gb|AAI56882.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
gi|162319248|gb|AAI56065.1| Diencephalon/mesencephalon homeobox 1 [synthetic construct]
Length = 382
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 129 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSL 183
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ QP PGS P P+ HL+L
Sbjct: 148 HGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSL 183
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 165 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR----- 219
Query: 164 AAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
K ++ + TS ++D + FN P P+ P +P +P +PIS
Sbjct: 220 -RAKWRRQEKMDNTSMKLHDSAMLSFN-------RPQMPPSVGPVANPMPLDPWLTSPIS 271
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR K ++ + TS ++D
Sbjct: 185 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR------RAKWRRQEKMDNTSMKLHD 238
Query: 287 KLRM-FNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P P+ P +P +P +PIS
Sbjct: 239 SAMLSFN-------RPQMPPSVGPVANPMPLDPWLTSPIS 271
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 339 QVWFSNRRAKWRREEKLRN 357
QVWF NRRAKWRR+EK+ N
Sbjct: 213 QVWFQNRRAKWRRQEKMDN 231
>gi|195058142|ref|XP_001995396.1| GH23137 [Drosophila grimshawi]
gi|193899602|gb|EDV98468.1| GH23137 [Drosophila grimshawi]
Length = 351
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ + LKRK +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTIHGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFARTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTSLTEARIQVWFSNRRAR 236
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ F RT YPDV+ RE LA L EARIQV NR R
Sbjct: 199 RAFARTQYPDVYTREELAQTTSLTEARIQVWFSNRRAR 236
>gi|112385967|gb|ABI17942.1| Pax 3/7A [Helobdella sp. MS-2000]
Length = 492
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S++ ++ + + +D D + +L RK +R+RT+F EQ LEK F RTHYPD++ RE L
Sbjct: 169 SSASVDGDDSMLSDVDVEPGFKLLRKQRRSRTTFDAEQTTQLEKAFSRTHYPDIYTREEL 228
Query: 141 ADKIGLPEARIQVSSINRVLR 161
A GL EARIQV NR R
Sbjct: 229 AQTSGLTEARIQVWFSNRRAR 249
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 25/38 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
K F RTHYPD++ RE LA GL EARIQV NR R
Sbjct: 212 KAFSRTHYPDIYTREELAQTSGLTEARIQVWFSNRRAR 249
>gi|47222353|emb|CAG05102.1| unnamed protein product [Tetraodon nigroviridis]
Length = 324
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
RD + E SD N +S + +SQ KRK +R+RT FT+ Q++ LEK F+ HYP
Sbjct: 131 RDQYSDEECLSDRN---DSKSSANSQ-----KRKKRRHRTVFTSHQLEELEKAFQEAHYP 182
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV+ARE LA K LPE RIQV NR
Sbjct: 183 DVYAREMLAMKTELPEDRIQVWFQNR 208
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 24/35 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+ HYPDV+ARE LA K LPE RIQV NR
Sbjct: 174 KAFQEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 208
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV
Sbjct: 44 EDSFVR----RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVW 99
Query: 155 SINR 158
NR
Sbjct: 100 FQNR 103
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 71 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNR 103
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWR+ E+L+ ++R G N TT L +PP SS +P
Sbjct: 97 QVWFQNRRAKWRKSERLKEEQRKREG--NGGGGALETTGL--------APPTSSSAGPSP 146
Query: 399 GGFNPSSMYSS 409
G +P SS
Sbjct: 147 TGHDPEGTTSS 157
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 16/94 (17%)
Query: 65 PGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEK 124
P S I D+ E E+ D N EP K+K +RNRT+FT Q+ LE+
Sbjct: 241 PQSSLSIMEDEMDEMEA--DENGEP--------------KKKHRRNRTTFTTYQLHELER 284
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 285 AFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 318
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 284 RAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 318
>gi|260829653|ref|XP_002609776.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
gi|229295138|gb|EEN65786.1| hypothetical protein BRAFLDRAFT_219419 [Branchiostoma floridae]
Length = 184
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA KI LPE R+QV NR
Sbjct: 1 MKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNR 56
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA KI LPE R+QV NR
Sbjct: 22 RAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNR 56
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 339 QVWFSNRRAKWRREEKLRNQ 358
QVWF NRRAKWRR+EK+ Q
Sbjct: 50 QVWFQNRRAKWRRQEKIEAQ 69
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 40 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 98
Query: 152 QVSSINR 158
QV NR
Sbjct: 99 QVWFQNR 105
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 73 FQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 105
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+Q
Sbjct: 179 VGEDSFVR----RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 234
Query: 153 VSSINR 158
V NR
Sbjct: 235 VWFQNR 240
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 208 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNR 240
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWR+ E+L+ ++R G N TT L +PP SS +P
Sbjct: 234 QVWFQNRRAKWRKSERLKEEQRKREG--NGGGGALETTGL--------APPTSSSAGPSP 283
Query: 399 GGFNPSSMYSS 409
G +P SS
Sbjct: 284 TGHDPEGTTSS 294
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 132 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR----- 186
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
A+ +Q T + +R FN P P P +LP +P +P+S
Sbjct: 187 RAKWRRQEKMDTGTMKLHDSPIRSFN-------RPPMAPNVGPMSNSLPLDPWLSSPLS 238
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR A+ +Q T +
Sbjct: 152 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR-----RAKWRRQEKMDTGTMKLHDS 206
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+R FN P P P +LP +P +P+S
Sbjct: 207 PIRSFN-------RPPMAPNVGPMSNSLPLDPWLSSPLS 238
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWRR+EK+ TG++ ++ + + P P S+ LPL+P
Sbjct: 180 QVWFQNRRAKWRRQEKM------DTGTMKLHDSPIR--SFNRPPMAPNVGPMSNSLPLDP 231
>gi|406719564|dbj|BAM45081.1| dorsal root ganglia homeobox, partial [Gallus gallus]
Length = 156
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 21 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 76
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 44 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 76
>gi|170052026|ref|XP_001862034.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872990|gb|EDS36373.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 219
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
KRK +R RT+FT+ Q++ LEK F RTHYPDVF RE LA KIGL EARIQ
Sbjct: 136 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQA 185
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 23/30 (76%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
K F RTHYPDVF RE LA KIGL EARIQ
Sbjct: 156 KAFSRTHYPDVFTREELAMKIGLTEARIQA 185
>gi|332219855|ref|XP_003259073.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Nomascus leucogenys]
Length = 377
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ +P PGS P P+ HL+L
Sbjct: 124 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTDRP--PCLPGSDP-PAELHLSL 178
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 142
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ +P PGS P P+ HL+L
Sbjct: 143 HGEGKAEAPTPDTQLDTDRP--PCLPGSDP-PAELHLSL 178
>gi|410901020|ref|XP_003963994.1| PREDICTED: visual system homeobox 1-like [Takifugu rubripes]
Length = 366
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 73 RDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYP 132
RD + E SD N +S + +SQ KRK +R+RT FT+ Q++ LEK F+ HYP
Sbjct: 131 RDQYSDEECLSDRN---DSKSSANSQ-----KRKKRRHRTVFTSHQLEELEKAFQEAHYP 182
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV+ARE LA K LPE RIQV NR
Sbjct: 183 DVYAREMLAMKTELPEDRIQVWFQNR 208
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 24/35 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+ HYPDV+ARE LA K LPE RIQV NR
Sbjct: 174 KAFQEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 208
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+Q
Sbjct: 227 VGEDSFVR----RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 282
Query: 153 VSSINR 158
V NR
Sbjct: 283 VWFQNR 288
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 256 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNR 288
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWR+ E+L+ ++R G N TT L +PP SS +P
Sbjct: 282 QVWFQNRRAKWRKSERLKEEQRKREG--NGGGGALETTGL--------APPTSSSAGPSP 331
Query: 399 GGFNPSSMYSS 409
G +P SS
Sbjct: 332 TGHDPEGTTSS 342
>gi|139001547|dbj|BAF51689.1| Pax6 [Dicyema acuticephalum]
gi|139001549|dbj|BAF51690.1| Pax6 [Dicyema acuticephalum]
Length = 408
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 30/156 (19%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLALP 62
+SSINRVLRNL + S+H+ T T Y WA+ P +
Sbjct: 122 ISSINRVLRNLQTGNIKDISSHS-TYTTDYQPRHEIGYATNWAF---------PREMFTQ 171
Query: 63 HNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSL 122
+ +S A++ ++ + P +K+K QRNRTSF+ EQ+ ++
Sbjct: 172 N-------LSNSSAEQSSMSNVLQDTP-------------VKKKSQRNRTSFSAEQLKTM 211
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
++ F+++HYPD+ RE++++K+ +PEARIQV NR
Sbjct: 212 DEHFQQSHYPDISIREKISEKLNIPEARIQVWFSNR 247
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 25/153 (16%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + + + +SSINRVLRNL + S+H+ T T Y
Sbjct: 97 PSIFAWEIRDRLLNNAVCTQENVPSISSINRVLRNLQTGNIKDISSHS-TYTTDYQPRHE 155
Query: 188 FNGQPGWAWYPGSTPTP----SPAHLALPHNPGSVTPISRDDAKE--------------- 228
WA +P T S A + N TP+ + +
Sbjct: 156 IGYATNWA-FPREMFTQNLSNSSAEQSSMSNVLQDTPVKKKSQRNRTSFSAEQLKTMDEH 214
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+++HYPD+ RE++++K+ +PEARIQV NR
Sbjct: 215 FQQSHYPDISIREKISEKLNIPEARIQVWFSNR 247
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 68/170 (40%), Gaps = 45/170 (26%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 290
P +FA R+RL + + + +SSINRVLRNL + S+H+ T T Y
Sbjct: 97 PSIFAWEIRDRLLNNAVCTQENVPSISSINRVLRNLQTGNIKDISSHS-TYTTDYQPRHE 155
Query: 291 FNGQPGWAWYPGSTPTP----SPAHLALPHNPGSVTPISRDDAKGLVQQSARQ------- 339
WA +P T S A + N TP+ + + SA Q
Sbjct: 156 IGYATNWA-FPREMFTQNLSNSSAEQSSMSNVLQDTPVKKKSQRNRTSFSAEQLKTMDEH 214
Query: 340 ---------------------------VWFSNRRAKWRREEKLRNQRRGS 362
VWFSNRRAKWRREEKL N+ RG+
Sbjct: 215 FQQSHYPDISIREKISEKLNIPEARIQVWFSNRRAKWRREEKL-NEDRGN 263
>gi|82570563|gb|ABB83753.1| NVHD148-paired class homeobox protein [Nematostella vectensis]
Length = 60
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+R RT+FT+EQI+ LEK FE+THYPDVF RE LA ++ L EARIQV NR
Sbjct: 2 RRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSEARIQVWYSNR 52
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FE+THYPDVF RE LA ++ L EARIQV NR
Sbjct: 18 KVFEKTHYPDVFTREELAQQVNLSEARIQVWYSNR 52
>gi|443703131|gb|ELU00842.1| hypothetical protein CAPTEDRAFT_171492 [Capitella teleta]
Length = 195
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV------S 154
+ K+K +RNRT+F ++Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV +
Sbjct: 26 CKKKQKQRRNRTTFNSQQLAALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRA 85
Query: 155 SINRVLRNLAAQK 167
R RN+ AQ+
Sbjct: 86 KFRRNERNVLAQR 98
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV------SSINRVLRNLAAQK 270
+ FERTHYPD F RE LA ++ L EAR+QV + R RN+ AQ+
Sbjct: 49 RVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERNVLAQR 98
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 20/114 (17%)
Query: 339 QVWFSNRRAKWRREEK----LRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRL 394
QVWF NRRAK+RR E+ R+ GS G+V + S P + + P++
Sbjct: 77 QVWFQNRRAKFRRNERNVLAQRSTMYGSGGAVGAVRPAESGCGTGEQPLSVR---PNATQ 133
Query: 395 PLNPGGF--------NPSSM----YSSIPQPAGMDSYNPSCLQQAAREHHHHSS 436
PL+ G + +P ++ Y+S PAG+ + + L+Q ARE++ +S
Sbjct: 134 PLHGGDYASWNSPAGSPCALAGNTYNSPAPPAGV-GLSLANLRQKAREYNMQNS 186
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 4/67 (5%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+
Sbjct: 228 GVGEDSFVR----RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARV 283
Query: 152 QVSSINR 158
QV NR
Sbjct: 284 QVWFQNR 290
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNP 398
QVWF NRRAKWR+ E+L+ ++R G N TT L PPTS S PS P
Sbjct: 284 QVWFQNRRAKWRKSERLKEEQRKREG--NGGGGALETTGL--APPTSSSAGPS------P 333
Query: 399 GGFNPSSMYSS 409
G +P SS
Sbjct: 334 TGHDPEGTTSS 344
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 258 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNR 290
>gi|301615106|ref|XP_002937019.1| PREDICTED: short stature homeobox protein-like [Xenopus (Silurana)
tropicalis]
Length = 290
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 18/113 (15%)
Query: 55 SPAHLALPHNPGS---------VTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKR 105
P HL H S T +S + E D+ SE DED Q +L
Sbjct: 63 CPLHLYKEHGADSDKDKLKDYGSTRVSEGIYECKEKRDDVKSE-----DEDGQTKL---- 113
Query: 106 KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 114 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 166
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 134 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 166
>gi|332219857|ref|XP_003259074.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Nomascus leucogenys]
Length = 382
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR--- 161
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 162 --------NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 211
L QKE + S +E ++ +P PGS P P+ HL+L
Sbjct: 129 KQRSLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTDRP--PCLPGSDP-PAELHLSL 183
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLAL 314
+E ++ +P PGS P P+ HL+L
Sbjct: 148 HGEGKAEAPTPDTQLDTDRP--PCLPGSDP-PAELHLSL 183
>gi|157278545|ref|NP_001098373.1| retinal homeobox protein Rx2 [Oryzias latipes]
gi|17380303|sp|Q9I9A2.1|RX2_ORYLA RecName: Full=Retinal homeobox protein Rx2
gi|7635917|emb|CAB88703.1| Rx2 transcription factor [Oryzias latipes]
Length = 327
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNR 188
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 154 RAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNR 188
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 182 QVWFQNRRAKWRRQEKM 198
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
SD P S D+ K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA
Sbjct: 125 SDEGKSPESCKDDQP------KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAM 178
Query: 143 KIGLPEARIQVSSINR 158
K+ LPE R+QV NR
Sbjct: 179 KVNLPEVRVQVWFQNR 194
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 160 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 194
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 188 QVWFQNRRAKWRRQEKM 204
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 33 KKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNR 87
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FER+HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 53 RAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNR 87
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 339 QVWFSNRRAKWRREEKLRN 357
QVWF NRRAKWRR+EKL +
Sbjct: 81 QVWFQNRRAKWRRQEKLES 99
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 33 KKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNR 87
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FER+HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 53 RAFERSHYPDVYSREELAMKVSLPEVRVQVWFQNR 87
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 339 QVWFSNRRAKWRREEKLRN 357
QVWF NRRAKWRR+EKL +
Sbjct: 81 QVWFQNRRAKWRRQEKLES 99
>gi|390342936|ref|XP_003725762.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Strongylocentrotus purpuratus]
gi|390342938|ref|XP_781076.2| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 391
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
+AD + R RK +R+RT+FTN+Q+ +LEK F +THYPDV RERLA LPEARI
Sbjct: 43 AADIILEARYGAHRKQRRSRTAFTNQQLAALEKTFAKTHYPDVVMRERLAMCTNLPEARI 102
Query: 152 QVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 184
QV NR + Q+ + + ++ + + DK
Sbjct: 103 QVWFKNRRAKFRKQQRNKSINEGDEDNHSNADK 135
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K F +THYPDV RERLA LPEARIQV NR + Q+ + + ++ + + D
Sbjct: 75 KTFAKTHYPDVVMRERLAMCTNLPEARIQVWFKNRRAKFRKQQRNKSINEGDEDNHSNAD 134
Query: 287 K 287
K
Sbjct: 135 K 135
>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Sus scrofa]
Length = 348
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 193
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 194 RQEKLEVSSMKLQDS 208
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 208
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 166 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 198
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 84 DINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D+ + SA D++ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA +
Sbjct: 247 DVFTSVCLSAGSDTEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMR 305
Query: 144 IGLPEARIQVSSINR 158
+ L EAR+QV NR
Sbjct: 306 LDLTEARVQVWFQNR 320
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
SA D++ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF
Sbjct: 207 SAGSDTEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVF 249
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 286 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 320
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +RNRT+FT+ Q++ +EK F++THYPDV+ RE+LA + L EAR+QV NR
Sbjct: 103 KRKKRRNRTTFTSFQLEEMEKVFQKTHYPDVYCREQLALRCDLTEARVQVWFQNR 157
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ RE+LA + L EAR+QV NR
Sbjct: 123 KVFQKTHYPDVYCREQLALRCDLTEARVQVWFQNR 157
>gi|54694845|gb|AAV38104.1| PaxIII, partial [Cherax destructor]
Length = 170
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 73 RDDA--KEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
RDD K+H + + +D +S+ + LKRK +R+RT+FT EQ++ LE+ FE+T
Sbjct: 87 RDDDPRKDHSIDGILGGGGSDESDIESEPGIPLKRKQRRSRTTFTAEQLEVLERSFEKTQ 146
Query: 131 YPDVFARERLADKIGLPEARIQV 153
YPDV+ RE LA K L EARIQV
Sbjct: 147 YPDVYTREELAQKAKLTEARIQV 169
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
+ FE+T YPDV+ RE LA K L EARIQV
Sbjct: 140 RSFEKTQYPDVYTREELAQKAKLTEARIQV 169
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|328717151|ref|XP_003246132.1| PREDICTED: paired mesoderm homeobox protein 1-like [Acyrthosiphon
pisum]
Length = 244
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P ++++ DSQ K K +RNRT+F++ Q+ +LEK FERTHYPD F RE LA ++ L E
Sbjct: 32 PQTNSETDSQR----KSKPRRNRTTFSSCQLRALEKVFERTHYPDAFVREELARRVCLSE 87
Query: 149 ARIQVSSINR 158
AR+QV NR
Sbjct: 88 ARVQVWFQNR 97
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%)
Query: 223 RDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
R K FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 59 RALEKVFERTHYPDAFVREELARRVCLSEARVQVWFQNR 97
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 6/78 (7%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV
Sbjct: 88 EDSFVR----RKQRRNRTTFTLQQLEELESAFVQTHYPDVFTREDLAMKINLTEARVQVW 143
Query: 155 SINRVLRNLAAQ--KEQQ 170
NR + +Q KE+Q
Sbjct: 144 FQNRRAKWRKSQRLKEEQ 161
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQ 273
F +THYPDVF RE LA KI L EAR+QV NR + +Q KE+Q
Sbjct: 115 FVQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKSQRLKEEQ 161
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 23/123 (18%)
Query: 52 PPPSPAHLALPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRL-------- 103
P P P + PH+ + DA++H+ D N S +E +++R +
Sbjct: 79 PSPHPTYGGPPHS------VRNSDAEQHQ-YHDTGLFANQSDEELAELRQSIQMDEGKSP 131
Query: 104 --------KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV
Sbjct: 132 ASSKDDPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWF 191
Query: 156 INR 158
NR
Sbjct: 192 QNR 194
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 160 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 194
>gi|221103284|ref|XP_002161581.1| PREDICTED: homeobox protein OTX2-B-like [Hydra magnipapillata]
Length = 272
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
RK +R RT+FT Q++ LE+ F +THYPD+F RE A KI LPE+R+QV NR R
Sbjct: 49 FPRKQRRERTTFTKSQLEILEELFLKTHYPDIFMREEAARKINLPESRVQVWFKNR--RA 106
Query: 163 LAAQKEQQASAHNQTSETV 181
QK +Q +TS ++
Sbjct: 107 KHRQKAKQDKTQKKTSNSI 125
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 188 FNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE---------------FERT 232
+NG P ++ P P S ++ P P P R +E F +T
Sbjct: 18 YNGVPSYSSMPSGFPYHSNVNMHYPLAPSCGFP--RKQRRERTTFTKSQLEILEELFLKT 75
Query: 233 HYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
HYPD+F RE A KI LPE+R+QV NR R QK +Q +TS ++
Sbjct: 76 HYPDIFMREEAARKINLPESRVQVWFKNR--RAKHRQKAKQDKTQKKTSNSI 125
>gi|157122935|ref|XP_001659964.1| retinal homeobox protein [Aedes aegypti]
gi|108882964|gb|EAT47189.1| AAEL001689-PA [Aedes aegypti]
Length = 756
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 394 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 448
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 414 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 448
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWF NRRAKWRR+EK + R G
Sbjct: 442 QVWFQNRRAKWRRQEKSESLRLG 464
>gi|395527040|ref|XP_003765660.1| PREDICTED: short stature homeobox protein isoform 2 [Sarcophilus
harrisii]
Length = 303
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 55 SPAHLALPH---NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNR 111
P HL H + + S A E E S DED Q +L K +R+R
Sbjct: 66 CPVHLFKDHVESDKDKLKEFSTGRAAEGIYECKEKREEVKSEDEDGQTKL----KQRRSR 121
Query: 112 TSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 122 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR----- 188
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
A+ +Q T + + FN P PT P + +LP +P +P+S
Sbjct: 189 RAKWRRQEKIDASTMKLHDSPMLSFN-------RPSMHPTVGPMNNSLPLDPWLPSPLS 240
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR A+ +Q T +
Sbjct: 154 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR-----RAKWRRQEKIDASTMKLHDS 208
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P PT P + +LP +P +P+S
Sbjct: 209 PMLSFN-------RPSMHPTVGPMNNSLPLDPWLPSPLS 240
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 182 QVWFQNRRAKWRRQEKI 198
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 83 SDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
D N + + S D +KRK +R RT+FTN Q++ LE F++THYPDVF RE LA
Sbjct: 51 CDDNDQSSGSLSTDQNSNSNVKRKQRRYRTTFTNFQLEELENSFQKTHYPDVFFREELAM 110
Query: 143 KIGLPEARIQVSSINR 158
+I L EAR+QV NR
Sbjct: 111 RIDLTEARVQVWFQNR 126
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F++THYPDVF RE LA +I L EAR+QV NR
Sbjct: 94 FQKTHYPDVFFREELAMRIDLTEARVQVWFQNR 126
>gi|395840473|ref|XP_003793082.1| PREDICTED: short stature homeobox protein [Otolemur garnettii]
Length = 289
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 96 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 146
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 147 LSQRLGLSEARVQVWFQNR 165
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 133 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 165
>gi|281333979|gb|ADA61179.1| paired box 7 [Meleagris gallopavo]
Length = 520
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 82/183 (44%), Gaps = 44/183 (24%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEF 126
S+ I D + SD+ SEP+ L LKRK +R+RT+FT EQ++ LEK F
Sbjct: 185 SIDGILGDKGNRLDEGSDVESEPD----------LPLKRKQRRSRTTFTAEQLEELEKAF 234
Query: 127 ER------------------THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKE 168
ER THYPD++ RE LA + L EAR+QV NR A+
Sbjct: 235 ERTHYPDIYTREELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWR 289
Query: 169 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE 228
+QA A ++L FN + P PT P LP + T IS+D +
Sbjct: 290 KQAGA---------NQLAAFNHLLPGGFPPTGMPTLPPYQ--LPDSTYPTTTISQDGSST 338
Query: 229 FER 231
R
Sbjct: 339 VHR 341
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR----- 188
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
A+ +Q T + + FN P PT P + +LP +P +P+S
Sbjct: 189 RAKWRRQEKIDASTMKLHDSPMLSFN-------RPSMHPTVGPMNNSLPLDPWLPSPLS 240
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR A+ +Q T +
Sbjct: 154 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR-----RAKWRRQEKIDASTMKLHDS 208
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P PT P + +LP +P +P+S
Sbjct: 209 PMLSFN-------RPSMHPTVGPMNNSLPLDPWLPSPLS 240
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 182 QVWFQNRRAKWRRQEKI 198
>gi|114681337|ref|XP_001149985.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan troglodytes]
gi|397518460|ref|XP_003829404.1| PREDICTED: visual system homeobox 1 isoform 1 [Pan paniscus]
Length = 365
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ R E STSD +S+ D + L KRK +R+RT FT Q++ LEK F H
Sbjct: 129 LGRQKCSESVSTSDEDSQSEDRNDLKASPTLG-KRKKRRHRTVFTAHQLEELEKAFSEAH 187
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDV+ARE LA K LPE RIQV NR
Sbjct: 188 YPDVYAREMLAVKTELPEDRIQVWFQNR 215
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNR 215
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+Q
Sbjct: 166 VGEDSFVR----RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQ 221
Query: 153 VSSINR 158
V NR
Sbjct: 222 VWFQNR 227
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 195 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNR 227
>gi|157110497|ref|XP_001651130.1| hypothetical protein AaeL_AAEL015234 [Aedes aegypti]
gi|108868381|gb|EAT32606.1| AAEL015234-PA, partial [Aedes aegypti]
Length = 180
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QVSS
Sbjct: 15 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVSS 67
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 24/30 (80%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSS 258
F +THYPDVF RE LA KI L EAR+QVSS
Sbjct: 38 FAQTHYPDVFTREDLAMKINLTEARVQVSS 67
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 193
Query: 164 AAQKEQQASAHNQTSETV 181
+K + +S Q S +
Sbjct: 194 RQEKLEVSSMKLQDSPLL 211
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S +
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPLL 211
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 166 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 198
>gi|242009008|ref|XP_002425285.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212509050|gb|EEB12547.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 513
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 11/98 (11%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR +
Sbjct: 46 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKW 105
Query: 163 LAAQ--KEQQASAHNQT---------SETVYDKLRMFN 189
A+ KE+Q T ET+ DK + N
Sbjct: 106 RKAERLKEEQRKRDGDTLTKRDSDGAKETMEDKFLVLN 143
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 11/75 (14%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQASAHNQT------ 280
F +THYPDVF RE LA KI L EAR+QV NR + A+ KE+Q T
Sbjct: 69 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKEEQRKRDGDTLTKRDS 128
Query: 281 ---SETVYDKLRMFN 292
ET+ DK + N
Sbjct: 129 DGAKETMEDKFLVLN 143
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTG 364
QVWF NRRAKWR+ E+L+ ++R G
Sbjct: 95 QVWFQNRRAKWRKAERLKEEQRKRDG 120
>gi|341877445|gb|EGT33380.1| CBN-CEH-8 protein [Caenorhabditis brenneri]
Length = 289
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
+ +K +RNRT+FT Q+ +LE F++THYPDV+ARE LA K+ LPE R+QV NR
Sbjct: 66 IDKKQRRNRTTFTTFQLHALEAAFDKTHYPDVYAREALALKVQLPEVRVQVWFQNR---- 121
Query: 163 LAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW 196
A+ +Q Q E K + + P W+W
Sbjct: 122 -RAKFRRQEKQDTQGEE----KPSLKDTMPSWSW 150
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F++THYPDV+ARE LA K+ LPE R+QV NR A+ +Q Q E K
Sbjct: 89 FDKTHYPDVYAREALALKVQLPEVRVQVWFQNR-----RAKFRRQEKQDTQGEE----KP 139
Query: 289 RMFNGQPGWAW 299
+ + P W+W
Sbjct: 140 SLKDTMPSWSW 150
>gi|119630510|gb|EAX10105.1| visual system homeobox 1 homolog, CHX10-like (zebrafish), isoform
CRA_b [Homo sapiens]
Length = 386
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
Query: 87 SEPNSSADEDSQMRLR---------LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
S+ S++DEDSQ R KRK +R+RT FT Q++ LEK F HYPDV+AR
Sbjct: 135 SDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAR 194
Query: 138 ERLADKIGLPEARIQVSSI 156
E LA K LPE RIQVS +
Sbjct: 195 EMLAVKTELPEDRIQVSGV 213
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
K F HYPDV+ARE LA K LPE RIQVS +
Sbjct: 181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVSGV 213
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
KRK +R RT+F+ Q+D LEK F RTHYPDVF RE LA ++ L EAR+QV NR
Sbjct: 187 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNR 241
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA ++ L EAR+QV NR
Sbjct: 207 KVFARTHYPDVFTREELAQRVILTEARVQVWFQNR 241
>gi|126337098|ref|XP_001362463.1| PREDICTED: short stature homeobox protein-like isoform 2
[Monodelphis domestica]
Length = 311
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 55 SPAHLALPH---NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNR 111
P HL H + + S A E E S DED Q +L K +R+R
Sbjct: 66 CPVHLFKDHVESDKDKLKEFSTGRAAEGIYECKEKREDVKSEDEDGQTKL----KQRRSR 121
Query: 112 TSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 122 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|397518462|ref|XP_003829405.1| PREDICTED: visual system homeobox 1 isoform 2 [Pan paniscus]
gi|410054951|ref|XP_003953742.1| PREDICTED: visual system homeobox 1 [Pan troglodytes]
Length = 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTH 130
+ R E STSD +S+ D + L KRK +R+RT FT Q++ LEK F H
Sbjct: 129 LGRQKCSESVSTSDEDSQSEDRNDLKASPTLG-KRKKRRHRTVFTAHQLEELEKAFSEAH 187
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDV+ARE LA K LPE RIQV NR
Sbjct: 188 YPDVYAREMLAVKTELPEDRIQVWFQNR 215
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNR 215
>gi|395527038|ref|XP_003765659.1| PREDICTED: short stature homeobox protein isoform 1 [Sarcophilus
harrisii]
Length = 292
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 55 SPAHLALPH---NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNR 111
P HL H + + S A E E S DED Q +L K +R+R
Sbjct: 66 CPVHLFKDHVESDKDKLKEFSTGRAAEGIYECKEKREEVKSEDEDGQTKL----KQRRSR 121
Query: 112 TSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 122 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|157817853|ref|NP_001103016.1| visual system homeobox 1 [Rattus norvegicus]
gi|149031121|gb|EDL86148.1| rCG37439 [Rattus norvegicus]
Length = 369
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 78 EHESTSDINSEPNSSADEDSQMRLRL-KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA 136
E+ STSD +S S D +M L L KRK +R+RT FT Q++ LEK F HYPDV+A
Sbjct: 140 ENISTSDGDSP--SEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYA 197
Query: 137 RERLADKIGLPEARIQVSSINR 158
RE LA K LPE RIQV NR
Sbjct: 198 REMLAVKTELPEDRIQVWFQNR 219
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 185 KAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNR 219
>gi|441673441|ref|XP_003282768.2| PREDICTED: uncharacterized protein LOC100581365 [Nomascus
leucogenys]
Length = 343
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 174 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 224
Query: 140 LADKIGLPEARIQVSS 155
L+ ++GL EAR+QV +
Sbjct: 225 LSQRLGLSEARVQVGT 240
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSS 258
F+ THYPD F RE L+ ++GL EAR+QV +
Sbjct: 211 FDETHYPDAFMREELSQRLGLSEARVQVGT 240
>gi|47225662|emb|CAG08005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 6 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 60
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 26 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 60
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 54 QVWFQNRRAKWRRQEKM 70
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 119 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 178
Query: 164 AAQKEQQASAHNQTSETV 181
+K + +S Q S +
Sbjct: 179 RQEKLEVSSMKLQDSPIL 196
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S +
Sbjct: 139 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPIL 196
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 167 QVWFQNRRAKWRRQEKL 183
>gi|348561355|ref|XP_003466478.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like [Cavia
porcellus]
Length = 424
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 229 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 287
Query: 152 QV 153
QV
Sbjct: 288 QV 289
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQV 256
+ F++THYPDVF RE LA ++ L EAR+QV
Sbjct: 260 RAFQKTHYPDVFTREELAMRLDLTEARVQV 289
>gi|344308172|ref|XP_003422752.1| PREDICTED: short stature homeobox protein-like [Loxodonta africana]
Length = 291
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 98 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 148
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 149 LSQRLGLSEARVQVWFQNR 167
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 135 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 167
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 207 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 260
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 261 AMRTDLTEARVQVWFQNR 278
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 244 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 278
>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
Length = 344
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 119 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 178
Query: 164 AAQKEQQASAHNQTSETV 181
+K + +S Q S +
Sbjct: 179 RQEKLEVSSMKLQDSPIL 196
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 284
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S +
Sbjct: 139 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPIL 196
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 167 QVWFQNRRAKWRRQEKL 183
>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
Length = 386
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 172 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 231
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 232 RQEKLEVSSMKLQDS 246
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 192 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 246
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 204 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 236
>gi|158297703|ref|XP_317892.4| AGAP011417-PA [Anopheles gambiae str. PEST]
gi|157014704|gb|EAA12932.5| AGAP011417-PA [Anopheles gambiae str. PEST]
Length = 603
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 7/77 (9%)
Query: 82 TSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
T+DI E ++S D D + K +RNRT+F+ EQ++ LEKEF+++HYP V RERLA
Sbjct: 279 TTDIEGEDSNSLDGD-------QPKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLA 331
Query: 142 DKIGLPEARIQVSSINR 158
+ L EAR+QV NR
Sbjct: 332 SRTSLSEARVQVWFSNR 348
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEF+++HYP V RERLA + L EAR+QV NR
Sbjct: 314 KEFDKSHYPCVSTRERLASRTSLSEARVQVWFSNR 348
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRR +++ +R
Sbjct: 342 QVWFSNRRAKWRRHQRMNLLKR 363
>gi|395749930|ref|XP_003779033.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pongo
abelii]
Length = 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|4138292|emb|CAA07775.1| Rx2 protein [Oryzias latipes]
Length = 188
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 7 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNR 61
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 27 RAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNR 61
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/17 (82%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EK+
Sbjct: 55 QVWFQNRRAKWRRQEKM 71
>gi|348528188|ref|XP_003451600.1| PREDICTED: short stature homeobox protein-like isoform 1
[Oreochromis niloticus]
Length = 285
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED+Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 89 EKKEDVKSE-----DEDAQGKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 139
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 140 LSQRLGLSEARVQVWFQNR 158
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 126 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 158
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 136 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 190
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 156 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 190
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 168 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 200
>gi|348528190|ref|XP_003451601.1| PREDICTED: short stature homeobox protein-like isoform 2
[Oreochromis niloticus]
Length = 293
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED+Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 89 EKKEDVKSE-----DEDAQGKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 139
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 140 LSQRLGLSEARVQVWFQNR 158
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 126 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 158
>gi|195380555|ref|XP_002049036.1| GJ20984 [Drosophila virilis]
gi|194143833|gb|EDW60229.1| GJ20984 [Drosophila virilis]
Length = 288
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 132 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 185
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 151 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 185
>gi|195149884|ref|XP_002015885.1| GL11298 [Drosophila persimilis]
gi|194109732|gb|EDW31775.1| GL11298 [Drosophila persimilis]
Length = 269
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 111 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 164
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 130 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 164
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 125 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 184
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 185 RQEKLEVSSMKLQDS 199
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 145 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 199
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 157 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 189
>gi|209489273|gb|ACI49051.1| hypothetical protein Cbre_JD08.003 [Caenorhabditis brenneri]
Length = 290
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
+ +K +RNRT+FT Q+ +LE F++THYPDV+ARE LA K+ LPE R+QV NR
Sbjct: 66 IDKKQRRNRTTFTTFQLHALEAAFDKTHYPDVYAREALALKVQLPEVRVQVWFQNR---- 121
Query: 163 LAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAW 196
A+ +Q Q E K + + P W+W
Sbjct: 122 -RAKFRRQEKQDTQGEE----KPSLKDTMPSWSW 150
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F++THYPDV+ARE LA K+ LPE R+QV NR A+ +Q Q E K
Sbjct: 89 FDKTHYPDVYAREALALKVQLPEVRVQVWFQNR-----RAKFRRQEKQDTQGEE----KP 139
Query: 289 RMFNGQPGWAW 299
+ + P W+W
Sbjct: 140 SLKDTMPSWSW 150
>gi|357611334|gb|EHJ67427.1| hypothetical protein KGM_16069 [Danaus plexippus]
Length = 432
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 53/82 (64%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
++RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR +
Sbjct: 150 VRRKQRRNRTTFTLQQLEELETAFAQTHYPDVFTREDLALKINLTEARVQVWFQNRRAKW 209
Query: 163 LAAQKEQQASAHNQTSETVYDK 184
A++ ++ + +E + +
Sbjct: 210 RKAERLKEEQRKREGAEVLAKR 231
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 75/191 (39%), Gaps = 39/191 (20%)
Query: 134 VFARERLADKIGL-PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
V AR +L +GL P +R++VS RV L K + AHN + T++ P
Sbjct: 43 VVARTKLLSAVGLAPWSRVRVSGYVRVSALLVTSKAGKLPAHN--AATIFSDANKLASGP 100
Query: 193 GWA--WYPGSTPTPSPAH------------LALPHNPGSVTPISRDDA------------ 226
G + P P H + P+ S P DD
Sbjct: 101 GGGRGLFCYHCPPSLPPHQHRLPTLEYPFTASHPYTSYSYHPAIHDDTFVRRKQRRNRTT 160
Query: 227 ----------KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASA 276
F +THYPDVF RE LA KI L EAR+QV NR + A++ ++
Sbjct: 161 FTLQQLEELETAFAQTHYPDVFTREDLALKINLTEARVQVWFQNRRAKWRKAERLKEEQR 220
Query: 277 HNQTSETVYDK 287
+ +E + +
Sbjct: 221 KREGAEVLAKR 231
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGS 365
QVWF NRRAKWR+ E+L+ ++R G+
Sbjct: 199 QVWFQNRRAKWRKAERLKEEQRKREGA 225
>gi|126337096|ref|XP_001362385.1| PREDICTED: short stature homeobox protein-like isoform 1
[Monodelphis domestica]
Length = 292
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 55 SPAHLALPH---NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNR 111
P HL H + + S A E E S DED Q +L K +R+R
Sbjct: 66 CPVHLFKDHVESDKDKLKEFSTGRAAEGIYECKEKREDVKSEDEDGQTKL----KQRRSR 121
Query: 112 TSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
T+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 122 TNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
+RK +RNRT+FT +Q++ LE F +THYPDVF RE LA +I L EAR+QV NR +
Sbjct: 51 RRKQRRNRTTFTVQQLEELESAFAKTHYPDVFTREDLALRINLTEARVQVWFQNRRAKWR 110
Query: 164 AAQKEQQ 170
A++ +Q
Sbjct: 111 KAERTKQ 117
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
F +THYPDVF RE LA +I L EAR+QV NR + A++ +Q
Sbjct: 73 FAKTHYPDVFTREDLALRINLTEARVQVWFQNRRAKWRKAERTKQ 117
>gi|119331074|ref|NP_001073192.1| short stature homeobox protein [Gallus gallus]
gi|110559938|gb|ABG76207.1| Shox [Gallus gallus]
Length = 291
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 98 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 148
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 149 LSQRLGLSEARVQVWFQNR 167
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 135 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 167
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 207 SAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 265
Query: 152 QVSSINR 158
QV NR
Sbjct: 266 QVWFQNR 272
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 238 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 272
>gi|351711411|gb|EHB14330.1| Diencephalon/mesencephalon homeobox protein 1 [Heterocephalus
glaber]
Length = 379
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 70 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 129
Query: 165 AQKEQQASAHNQTSET 180
Q+ Q + ET
Sbjct: 130 KQRSLQKEQLQKQKET 145
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
K F++THYPDV RERLA LPEAR+QV NR + Q+ Q + ET
Sbjct: 89 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKET 145
>gi|321453331|gb|EFX64576.1| hypothetical protein DAPPUDRAFT_334067 [Daphnia pulex]
Length = 265
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 60 ALPHNPG---SVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTN 116
A PH P ++ I + E E +SDI SEP + LKRK +R+RT+F+
Sbjct: 178 ADPHRPQHDHTINGILAGRSSEDEDSSDIESEPG----------IALKRKQRRSRTTFSA 227
Query: 117 EQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+Q++ LE+ FER+ YPDV+ RE LA K L EAR+Q
Sbjct: 228 DQLEELERAFERSQYPDVYTREELAQKTRLTEARVQ 263
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQ 255
+ FER+ YPDV+ RE LA K L EAR+Q
Sbjct: 235 RAFERSQYPDVYTREELAQKTRLTEARVQ 263
>gi|198456647|ref|XP_001360401.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
gi|198135692|gb|EAL24976.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
Length = 269
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 111 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 164
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 130 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 164
>gi|77748087|gb|AAI07619.1| Short stature homeobox [Danio rerio]
Length = 258
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED+Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 94 EDVKSEDEDAQSKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 149
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 150 EARVQVWFQNR 160
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 128 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 160
>gi|40806216|ref|NP_955457.1| visual system homeobox 1 isoform b [Homo sapiens]
gi|9802265|gb|AAF99657.1|AF251034_1 homeodomain protein RINX, S1 isoform [Homo sapiens]
gi|112820186|gb|ABI23974.1| visual system homeobox 1 transcript variant 2 [Homo sapiens]
Length = 239
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Query: 91 SSADEDSQMRLR---------LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLA 141
S++DEDSQ R KRK +R+RT FT Q++ LEK F HYPDV+ARE LA
Sbjct: 139 STSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLA 198
Query: 142 DKIGLPEARIQVSSI 156
K LPE RIQVS +
Sbjct: 199 VKTELPEDRIQVSGV 213
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
K F HYPDV+ARE LA K LPE RIQVS +
Sbjct: 181 KAFSEAHYPDVYAREMLAVKTELPEDRIQVSGV 213
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 170 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 229
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 230 RQEKLEVSSMKLQDS 244
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 190 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 244
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 202 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 234
>gi|444706976|gb|ELW48288.1| Homeobox protein ARX [Tupaia chinensis]
Length = 147
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+QVS
Sbjct: 74 LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQVSC 126
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSS 258
F++THYPDVF RE LA ++ L EAR+QVS
Sbjct: 97 FQKTHYPDVFTREELAMRLDLTEARVQVSC 126
>gi|402912573|ref|XP_003918830.1| PREDICTED: short stature homeobox protein-like [Papio anubis]
Length = 294
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 101 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 151
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 152 LSQRLGLSEARVQVWFQNR 170
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 138 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 170
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 86 NSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
N+ N +D++ Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+
Sbjct: 114 NNSDNKLSDDEQQP----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVN 169
Query: 146 LPEARIQVSSINR 158
LPE R+QV NR
Sbjct: 170 LPEVRVQVWFQNR 182
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 148 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 182
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 176 QVWFQNRRAKWRRQEKL 192
>gi|157278223|ref|NP_001098211.1| Medaka OG-12 [Oryzias latipes]
gi|2959596|gb|AAC05613.1| Medaka OG-12 [Oryzias latipes]
Length = 282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED+Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 89 EKKEDVKSE-----DEDAQGKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 139
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 140 LSQRLGLSEARVQVWFQNR 158
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 126 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 158
>gi|4566741|gb|AAD23438.1|AF115392_1 retinal homeobox protein RX [Homo sapiens]
Length = 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
Length = 344
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|332266934|ref|XP_003282447.1| PREDICTED: double homeobox protein 4-like protein 4-like [Nomascus
leucogenys]
Length = 447
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 74/170 (43%), Gaps = 28/170 (16%)
Query: 96 DSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
D + + + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 86 DGTLTAEARGRGRRTRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGVPEPRVQIWF 145
Query: 156 INRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 215
N R L + + + + R ++ TPS L L
Sbjct: 146 QNERSRQLRQHRRESRPWPGRRGPPEGRRKR-------------TSVTPSQTALLL---- 188
Query: 216 GSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +PD+ RERLA + GLPE+RI V NR R+
Sbjct: 189 -----------RGFEKDRFPDIATRERLARETGLPESRIHVWFQNRRARH 227
>gi|156547635|ref|XP_001603937.1| PREDICTED: retinal homeobox protein Rx-A-like [Nasonia vitripennis]
Length = 306
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 85 INSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
NS +S DE S + K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+
Sbjct: 69 CNSTGGNSEDELSP-SIEKKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKV 127
Query: 145 GLPEARIQVSSINR 158
LPE R+QV NR
Sbjct: 128 QLPEVRVQVWFQNR 141
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 107 RAFEKSHYPDVYSREELAIKVQLPEVRVQVWFQNR 141
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 18/85 (21%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLP--- 395
QVWF NRRAKWRR+EK+ R G + ++AN S P+ LP
Sbjct: 135 QVWFQNRRAKWRRQEKMEAARLGIS-EYHAANAMRSVAG------------PALGLPGDP 181
Query: 396 -LNPGGFNPSSMYSSIPQPAGMDSY 419
L+PG N + + P PAG SY
Sbjct: 182 WLHPGVLNTLPGFLTAP-PAGYASY 205
>gi|149044776|gb|EDL97962.1| orthodenticle homolog 1 (Drosophila), isoform CRA_a [Rattus
norvegicus]
Length = 398
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
RK +R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR A
Sbjct: 93 RKQRRERTTFTRSQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNR----RA 148
Query: 165 AQKEQQASAHNQTSETVYDK 184
++QQ S + S V K
Sbjct: 149 KCRQQQQSGNGTKSRPVKKK 168
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 287
F +T YPD+F RE +A KI LPE+R+QV NR A ++QQ S + S V K
Sbjct: 114 FAKTRYPDIFMREEVALKINLPESRVQVWFKNR----RAKCRQQQQSGNGTKSRPVKKK 168
>gi|296490338|tpg|DAA32451.1| TPA: short stature homeobox-like isoform 1 [Bos taurus]
Length = 294
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 21/129 (16%)
Query: 55 SPAHLALPHNPGSVTPISRDDAKEH------ESTSDINSEPNS--SADEDSQMRLRLKRK 106
P HL H +D KE E D + + S DED Q +L K
Sbjct: 68 CPVHLFKDH-----VDTEKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKL----K 118
Query: 107 LQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ 166
+R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR A
Sbjct: 119 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AKC 174
Query: 167 KEQQASAHN 175
++Q+ HN
Sbjct: 175 RKQENQMHN 183
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
F+ THYPD F RE L+ ++GL EAR+QV NR A ++Q+ HN
Sbjct: 138 FDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AKCRKQENQMHN 183
>gi|441603513|ref|XP_004093153.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Nomascus leucogenys]
Length = 337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
EDS +R RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV
Sbjct: 15 EDSFVR----RKQRRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTEARVQVW 70
Query: 155 SINR 158
NR
Sbjct: 71 FQNR 74
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 42 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNR 74
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 201 SAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 259
Query: 152 QVSSINR 158
QV NR
Sbjct: 260 QVWFQNR 266
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 232 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 266
>gi|426386097|ref|XP_004059529.1| PREDICTED: retinal homeobox protein Rx [Gorilla gorilla gorilla]
Length = 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|319740964|gb|ADV69001.1| retinal homeobox [Patiria miniata]
Length = 314
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 212 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 266
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 232 RAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 266
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 339 QVWFSNRRAKWRREEKLRN 357
QVWF NRRAKWRR+EK+ +
Sbjct: 260 QVWFQNRRAKWRRQEKMES 278
>gi|109122304|ref|XP_001087324.1| PREDICTED: retinal homeobox protein Rx [Macaca mulatta]
Length = 347
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|6031203|ref|NP_006874.1| short stature homeobox protein isoform SHOXb [Homo sapiens]
gi|2463205|emb|CAA72298.1| SHOXb protein [Homo sapiens]
gi|119587219|gb|EAW66815.1| short stature homeobox, isoform CRA_a [Homo sapiens]
gi|146327474|gb|AAI41504.1| Short stature homeobox [synthetic construct]
gi|151556572|gb|AAI48784.1| Short stature homeobox [synthetic construct]
Length = 225
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 99 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 150 LSQRLGLSEARVQVWFQNR 168
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|4506943|ref|NP_000442.1| short stature homeobox protein isoform SHOXa [Homo sapiens]
gi|426394997|ref|XP_004063767.1| PREDICTED: short stature homeobox protein [Gorilla gorilla gorilla]
gi|6831676|sp|O15266.1|SHOX_HUMAN RecName: Full=Short stature homeobox protein; AltName:
Full=Pseudoautosomal homeobox-containing osteogenic
protein; AltName: Full=Short stature homeobox-containing
protein
gi|2463203|emb|CAA72299.1| SHOXa protein [Homo sapiens]
gi|3176736|gb|AAC18820.1| pseudoautosomal homeodomain-containing protein [Homo sapiens]
gi|119587220|gb|EAW66816.1| short stature homeobox, isoform CRA_b [Homo sapiens]
gi|119587221|gb|EAW66817.1| short stature homeobox, isoform CRA_b [Homo sapiens]
Length = 292
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 99 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 150 LSQRLGLSEARVQVWFQNR 168
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|126116581|ref|NP_038463.2| retinal homeobox protein Rx [Homo sapiens]
gi|296452886|sp|Q9Y2V3.2|RX_HUMAN RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|119583497|gb|EAW63093.1| retina and anterior neural fold homeobox [Homo sapiens]
gi|162317600|gb|AAI56202.1| Retina and anterior neural fold homeobox [synthetic construct]
gi|162318774|gb|AAI57123.1| Retina and anterior neural fold homeobox [synthetic construct]
Length = 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|114673345|ref|XP_001142510.1| PREDICTED: retinal homeobox protein Rx isoform 2 [Pan troglodytes]
Length = 346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|431901319|gb|ELK08346.1| Dorsal root ganglia homeobox protein [Pteropus alecto]
Length = 381
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 42/52 (80%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+Q++
Sbjct: 33 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQLA 84
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 49/128 (38%), Gaps = 53/128 (41%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSE--TVYD 286
F +THYPDVF RE LA KI L EAR+Q L N + E Q ++ E V D
Sbjct: 56 FAQTHYPDVFTREELAMKINLTEARVQ-------LANSCLKTELQIEINDTIIEHSEVED 108
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRR 346
HN + AR VWF NRR
Sbjct: 109 -----------------------------HN--------------FSLKGAR-VWFQNRR 124
Query: 347 AKWRREEK 354
AKWR+ E+
Sbjct: 125 AKWRKTER 132
>gi|410977842|ref|XP_003995309.1| PREDICTED: retinal homeobox protein Rx [Felis catus]
Length = 390
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 208 SAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 266
Query: 152 QVSSINR 158
QV NR
Sbjct: 267 QVWFQNR 273
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 239 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 273
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 546 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 600
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 566 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 600
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 18/23 (78%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRG 361
QVWF NRRAKWRR+EK + R G
Sbjct: 594 QVWFQNRRAKWRRQEKSESLRLG 616
>gi|405962470|gb|EKC28141.1| Homeobox protein otx5-B [Crassostrea gigas]
Length = 320
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
RK +R RT+FT Q+D LE F++T YPD+F RE +A KI LPE+R+QV NR +
Sbjct: 108 RKQRRERTTFTRAQLDILESLFQKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ 167
Query: 165 AQKEQQA 171
QK Q+
Sbjct: 168 QQKAQEG 174
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQA 274
F++T YPD+F RE +A KI LPE+R+QV NR + QK Q+
Sbjct: 129 FQKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQKAQEG 174
>gi|395512821|ref|XP_003760632.1| PREDICTED: retinal homeobox protein Rx1-like [Sarcophilus harrisii]
Length = 208
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 89 PNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S ED+ K+K +RNRT+FT Q+ LE+ FER+HYPDV++RE LA ++ LPE
Sbjct: 16 PGSGEAEDAP-----KKKHRRNRTTFTTFQLHQLERAFERSHYPDVYSREELATQVNLPE 70
Query: 149 ARIQVSSINR 158
R+QV NR
Sbjct: 71 VRVQVWFQNR 80
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FER+HYPDV++RE LA ++ LPE R+QV NR
Sbjct: 46 RAFERSHYPDVYSREELATQVNLPEVRVQVWFQNR 80
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQS-PPPSSRLPLN 397
QVWF NRRAKWRR+EKL ++A +TT L P + + PPP++ LPL+
Sbjct: 74 QVWFQNRRAKWRRQEKLEAS--------SAAAVAAATTKLPEAPMLAFARPPPTASLPLD 125
Query: 398 P 398
P
Sbjct: 126 P 126
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+FT+ Q++ +EK F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 134 RKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 187
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F+RTHYPDV+ RE+LA + L EAR+QV NR
Sbjct: 153 KVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNR 187
>gi|432866185|ref|XP_004070727.1| PREDICTED: homeobox protein aristaless-like 3-like [Oryzias
latipes]
Length = 369
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 88 EPNSSADEDS---QMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
EP SS DS + L K K +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA +
Sbjct: 148 EPGSSLQGDSIADSIDLSGKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRT 207
Query: 145 GLPEARIQVSSINR 158
L EAR+QV NR
Sbjct: 208 ELTEARVQVWFQNR 221
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 187 KVFQKTHYPDVYAREQLALRTELTEARVQVWFQNR 221
>gi|300796730|ref|NP_001178475.1| short stature homeobox protein [Bos taurus]
gi|296490337|tpg|DAA32450.1| TPA: short stature homeobox-like isoform 2 [Bos taurus]
Length = 306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 21/129 (16%)
Query: 55 SPAHLALPHNPGSVTPISRDDAKEH------ESTSDINSEPNS--SADEDSQMRLRLKRK 106
P HL H +D KE E D + + S DED Q +L K
Sbjct: 68 CPVHLFKDH-----VDTEKDKLKEFGSGRAAEGIYDCKDKRDDVKSEDEDGQTKL----K 118
Query: 107 LQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ 166
+R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR A
Sbjct: 119 QRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AKC 174
Query: 167 KEQQASAHN 175
++Q+ HN
Sbjct: 175 RKQENQMHN 183
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
F+ THYPD F RE L+ ++GL EAR+QV NR A ++Q+ HN
Sbjct: 138 FDETHYPDAFMREELSQRLGLSEARVQVWFQNRR----AKCRKQENQMHN 183
>gi|281339716|gb|EFB15300.1| hypothetical protein PANDA_014123 [Ailuropoda melanoleuca]
Length = 219
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|410896364|ref|XP_003961669.1| PREDICTED: short stature homeobox protein-like isoform 2 [Takifugu
rubripes]
Length = 294
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 89 EKKEDVKSE-----DEDGQGKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 139
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 140 LSQRLGLSEARVQVWFQNR 158
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 126 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 158
>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 193
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 194 RQEKLEVSSMKLQDS 208
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 208
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 166 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 198
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 129 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 188
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 189 RQEKLEVSSMKLQDS 203
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 149 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 203
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 161 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 193
>gi|195489018|ref|XP_002092559.1| GE11607 [Drosophila yakuba]
gi|194178660|gb|EDW92271.1| GE11607 [Drosophila yakuba]
Length = 286
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 125 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 144 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 178
>gi|195057533|ref|XP_001995277.1| GH23067 [Drosophila grimshawi]
gi|193899483|gb|EDV98349.1| GH23067 [Drosophila grimshawi]
Length = 285
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 135 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 188
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 154 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 188
>gi|21396471|gb|AAM49062.1| transcription factor DRG11 [Mus musculus]
Length = 95
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 20 LRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 75
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 43 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 75
>gi|348553431|ref|XP_003462530.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cavia porcellus]
Length = 372
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 165 AQKEQQASAHNQTSET 180
Q+ Q + ET
Sbjct: 124 KQRSLQKEQLQKQKET 139
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
K F++THYPDV RERLA LPEAR+QV NR + Q+ Q + ET
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKET 139
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 208 SAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 266
Query: 152 QVSSINR 158
QV NR
Sbjct: 267 QVWFQNR 273
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 239 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 273
>gi|395530279|ref|XP_003767224.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1
[Sarcophilus harrisii]
Length = 316
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 123
Query: 165 AQKEQQASAHNQTSET 180
Q+ Q + ET
Sbjct: 124 KQRSLQKEQLQKQKET 139
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
K F++THYPDV RERLA LPEAR+QV NR + Q+ Q + ET
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKET 139
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RK +RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 46 RRKQRRNRTTFTLQQLEELENAFAKTHYPDVFTREDLAMKINLTEARVQVWFQNR 100
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 68 FAKTHYPDVFTREDLAMKINLTEARVQVWFQNR 100
>gi|225355244|gb|ACN88554.1| paired box protein 3b [Danio rerio]
Length = 286
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 81 STSDINSEPNSSADEDSQMR----LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFA 136
S I ++ +S +DE S++ L KRK +R+RT+FT +Q++ LE+ FERTHYPD++
Sbjct: 192 SIEGIQADRSSPSDEGSEVESEPDLPPKRKQRRSRTTFTADQLEELERAFERTHYPDIYT 251
Query: 137 RERLADKIGLPEARIQVSSINRVLR 161
RE LA + L EAR+QV NR R
Sbjct: 252 REELAQRAKLTEARVQVWFSNRRAR 276
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 239 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 276
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D E D P ++ +E+ K+K +RNRT+FT Q+ LE+ FE++HYPDV
Sbjct: 11 DLGELRKPGDGEGTPPAATEEEQP-----KKKHRRNRTTFTTYQLHELERAFEKSHYPDV 65
Query: 135 FARERLADKIGLPEARIQVSSINR 158
++RE LA K+ LPE R+QV NR
Sbjct: 66 YSREELAMKVNLPEVRVQVWFQNR 89
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 55 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 89
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 83 QVWFQNRRAKWRRQEKL 99
>gi|348553433|ref|XP_003462531.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cavia porcellus]
Length = 377
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLA 164
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 128
Query: 165 AQKEQQASAHNQTSET 180
Q+ Q + ET
Sbjct: 129 KQRSLQKEQLQKQKET 144
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
K F++THYPDV RERLA LPEAR+QV NR + Q+ Q + ET
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKET 144
>gi|224043036|ref|XP_002198003.1| PREDICTED: short stature homeobox protein [Taeniopygia guttata]
Length = 291
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 98 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 148
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 149 LSQRLGLSEARVQVWFQNR 167
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 135 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 167
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPD 133
+D + S D+ + S D+ K+K +RNRT+FT Q+ LE+ FE++HYPD
Sbjct: 112 NDKLGYSSDEDMKHSHDDSMGNDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEKSHYPD 171
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
V++RE LA K+ LPE R+QV NR
Sbjct: 172 VYSREELALKVNLPEVRVQVWFQNR 196
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 162 RAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 196
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWF NRRAKWRR+EK+ Q+
Sbjct: 190 QVWFQNRRAKWRRQEKMEAQQ 210
>gi|74178801|dbj|BAE34043.1| unnamed protein product [Mus musculus]
Length = 363
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRL-KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARE 138
ES S + + S D +M L L KRK +R+RT FT Q++ LEK F HYPDV+ARE
Sbjct: 143 ESVSTSDGDSPSEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYARE 202
Query: 139 RLADKIGLPEARIQVSSINR 158
LA K LPE RIQV NR
Sbjct: 203 MLAAKTELPEDRIQVWFQNR 222
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 188 KAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNR 222
>gi|410896362|ref|XP_003961668.1| PREDICTED: short stature homeobox protein-like isoform 1 [Takifugu
rubripes]
Length = 282
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 89 EKKEDVKSE-----DEDGQGKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 139
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 140 LSQRLGLSEARVQVWFQNR 158
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 126 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 158
>gi|358253861|dbj|GAA53869.1| retinal homeobox protein Rax [Clonorchis sinensis]
Length = 440
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Query: 106 KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAA 165
K++RNRT+FT Q+ LE+ FE +HYPDV RE LA KI LPE R+QV NR +
Sbjct: 256 KVRRNRTTFTTYQLHELERAFEYSHYPDVMFREELAQKIRLPEVRVQVWFQNRRAK-WRR 314
Query: 166 QKEQQASAHNQTSETVYDK 184
Q++Q+ + H++ E V+ K
Sbjct: 315 QEKQEDAEHSRHLEEVFPK 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE +HYPDV RE LA KI LPE R+QV NR + Q++Q+ + H++ E V+
Sbjct: 274 RAFEYSHYPDVMFREELAQKIRLPEVRVQVWFQNRRAK-WRRQEKQEDAEHSRHLEEVFP 332
Query: 287 K 287
K
Sbjct: 333 K 333
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 13/100 (13%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D +E+ S SD + P+ + KRK +R RT+F+ Q+D LEK F RTHYPDV
Sbjct: 86 DCRENGSPSDGTNSPDDNG----------KRKQRRYRTTFSAFQLDELEKVFGRTHYPDV 135
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 174
F RE LA ++ L EAR+QV NR + +K++++S H
Sbjct: 136 FTREELATRVQLTEARVQVWFQNRRAK---YRKQERSSTH 172
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 277
K F RTHYPDVF RE LA ++ L EAR+QV NR + +K++++S H
Sbjct: 125 KVFGRTHYPDVFTREELATRVQLTEARVQVWFQNRRAK---YRKQERSSTH 172
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 177 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 230
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 231 AMRTDLTEARVQVWFQNR 248
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 214 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 248
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 194 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 247
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 248 AMRTDLTEARVQVWFQNR 265
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 231 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 194 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 247
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 248 AMRTDLTEARVQVWFQNR 265
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 231 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ + LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 201 SAGSDSEEGM-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 259
Query: 152 QVSSINR 158
QV NR
Sbjct: 260 QVWFQNR 266
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 232 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 266
>gi|21955176|ref|NP_665710.1| dorsal root ganglia homeobox protein [Rattus norvegicus]
gi|6015028|sp|Q62798.1|DRGX_RAT RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|1144015|gb|AAA87203.1| paired-like homeodomain transcription factor [Rattus norvegicus]
Length = 263
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 42/56 (75%)
Query: 103 LKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L+RK +RNRT+F +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 29 LRRKQRRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>gi|195376711|ref|XP_002047136.1| GJ13265 [Drosophila virilis]
gi|194154294|gb|EDW69478.1| GJ13265 [Drosophila virilis]
Length = 719
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 39/191 (20%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSE-TVYDKLRMFNGQPGWAWYPGST---------- 51
VSSINR+LRN AA E+ AS +T+ +Y G + W+PG+
Sbjct: 164 VSSINRILRNRAA--ERVASEFARTAAYGLYPPPPHPYGS--FTWHPGNVPGGSPVPPPP 219
Query: 52 ----PPPSPAHLALPHNPGSVTPISRDDAKEHE---------------STSDINSEPNSS 92
P +P LP + GS TP S + + S + E S
Sbjct: 220 SALWPVAAPTLANLPPSAGSATPGSLSLSSANLLGSPAGGGAPMNRAISPGSGSHETLES 279
Query: 93 ADEDSQMRLRLKR-----KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
ADE+ Q+ K +RNRT+F+ EQ++ LEKEF+++HYP V RERL+ + L
Sbjct: 280 ADENRQIDSDYLDDDDEPKFRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLS 339
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 340 EARVQVWFSNR 350
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEF+++HYP V RERL+ + L EAR+QV NR
Sbjct: 316 KEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNR 350
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 339 QVWFSNRRAKWRREEKLRNQRRGSTGSVNSANTTTSTTALDHVPPTSQSPPPSS 392
QVWFSNRRAKWRR +++ +R + N ++ S P + SP PS+
Sbjct: 344 QVWFSNRRAKWRRHQRMNLLKRQRSSPANPIHSQQSNDG-----PANSSPTPST 392
>gi|15146039|gb|AAK82936.1| pairberry 1 transcription factor [Schistocerca americana]
Length = 234
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 73 RDDA---KEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERT 129
RDDA K H + +D +S+ + LKRK +R+RT+F+ +Q+++LE+ F+RT
Sbjct: 99 RDDADLRKNHSIDGILGPSSADESDTESEPGIPLKRKQRRSRTTFSGDQLETLERAFQRT 158
Query: 130 HYPDVFARERLADKIGLPEARIQVSSINR 158
YPDV+ RE LA K L EAR+QV NR
Sbjct: 159 QYPDVYTREELAQKTKLTEARVQVWFSNR 187
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ F+RT YPDV+ RE LA K L EAR+QV NR
Sbjct: 153 RAFQRTQYPDVYTREELAQKTKLTEARVQVWFSNR 187
>gi|327268134|ref|XP_003218853.1| PREDICTED: short stature homeobox protein-like [Anolis
carolinensis]
Length = 308
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 118 EEVKSEDEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 173
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 174 EARVQVWFQNR 184
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 152 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 184
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 13/100 (13%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D +E+ S SD + P+ + KRK +R RT+F+ Q+D LEK F RTHYPDV
Sbjct: 86 DCRENGSPSDGTNSPDDNG----------KRKQRRYRTTFSAFQLDELEKVFGRTHYPDV 135
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 174
F RE LA ++ L EAR+QV NR + +K++++S H
Sbjct: 136 FTREELATRVQLTEARVQVWFQNRRAK---YRKQERSSTH 172
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAH 277
K F RTHYPDVF RE LA ++ L EAR+QV NR + +K++++S H
Sbjct: 125 KVFGRTHYPDVFTREELATRVQLTEARVQVWFQNRRAK---YRKQERSSTH 172
>gi|348581289|ref|XP_003476410.1| PREDICTED: visual system homeobox 1-like [Cavia porcellus]
Length = 425
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 71 ISRDDAKE-HESTSDINSEPNSSADEDSQMRLR---LKRKLQRNRTSFTNEQIDSLEKEF 126
+ R + KE H + + +E +S +++ S ++ KRK +R+RT FT +Q++ LEK F
Sbjct: 197 LGRGEGKEDHHTALSVPTEEDSLSEDKSDPKVSPGLGKRKKRRHRTVFTAQQLEELEKAF 256
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINR 158
HYPDV+ARE LA K LPE RIQV NR
Sbjct: 257 REAHYPDVYAREMLALKTQLPEDRIQVWFQNR 288
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 23/35 (65%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 254 KAFREAHYPDVYAREMLALKTQLPEDRIQVWFQNR 288
>gi|119619438|gb|EAW99032.1| aristaless related homeobox, isoform CRA_b [Homo sapiens]
Length = 258
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 92 SADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
SA DS+ L LKRK +R RT+FT+ Q++ LE+ F++THYPDVF RE LA ++ L EAR+
Sbjct: 181 SAGSDSEEGL-LKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARV 239
Query: 152 QVSSINRVL 160
Q N V
Sbjct: 240 QRCDSNSVF 248
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVL 263
F++THYPDVF RE LA ++ L EAR+Q N V
Sbjct: 214 FQKTHYPDVFTREELAMRLDLTEARVQRCDSNSVF 248
>gi|166795309|ref|NP_001107659.1| eyegone [Nasonia vitripennis]
Length = 649
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 95 EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVS 154
ED + + K +RNRT+F+ EQ++ LEKEFER+HYP V RERLA K L EAR+QV
Sbjct: 442 EDGSLDGSEQPKFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEARVQVW 501
Query: 155 SINR 158
NR
Sbjct: 502 FSNR 505
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFER+HYP V RERLA K L EAR+QV NR
Sbjct: 471 KEFERSHYPCVSTRERLASKTSLSEARVQVWFSNR 505
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 320 SVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
V+ R +K + ++ QVWFSNRRAKWRR +++ +R
Sbjct: 480 CVSTRERLASKTSLSEARVQVWFSNRRAKWRRHQRMNLLKR 520
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 194 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 247
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 248 AMRTDLTEARVQVWFQNR 265
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 231 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 134 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 166 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 198
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 196 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 249
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 250 AMRTDLTEARVQVWFQNR 267
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 233 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 267
>gi|301603587|ref|XP_002931450.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 367
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 122
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV RERLA LPEAR+QV NR
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 122
>gi|297709290|ref|XP_002831369.1| PREDICTED: short stature homeobox protein isoform 1 [Pongo abelii]
Length = 292
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 102 EEVKSEDEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 157
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 158 EARVQVWFQNR 168
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|195589818|ref|XP_002084646.1| GD12721 [Drosophila simulans]
gi|194196655|gb|EDX10231.1| GD12721 [Drosophila simulans]
Length = 635
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 59 LALPH-NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
L+LP +P S + SR + DI E + S D D + K +RNRT+F+ E
Sbjct: 338 LSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSD-------QPKFRRNRTTFSPE 390
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
Q+D LEKEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 391 QLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 431
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 397 KEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 431
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 329 AKGLVQQSARQVWFSNRRAKWRREEKL 355
A+ + ++ QVWFSNRRAKWRR +++
Sbjct: 415 ARTALSEARVQVWFSNRRAKWRRHQRV 441
>gi|194884904|ref|XP_001976349.1| GG20068 [Drosophila erecta]
gi|190659536|gb|EDV56749.1| GG20068 [Drosophila erecta]
Length = 281
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 117 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 170
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 136 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 170
>gi|395753638|ref|XP_003779635.1| PREDICTED: short stature homeobox protein isoform 2 [Pongo abelii]
Length = 306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 102 EEVKSEDEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 157
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 158 EARVQVWFQNR 168
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 9/96 (9%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDS--------QMRLRLKRKLQRNRTSFTNEQIDSL 122
IS DD + +S + ++++ ++DE S Q L + K +R RT+FT Q+D L
Sbjct: 104 ISGDDCETLDSPT-LDNDGALTSDEVSPTVLDTYRQQALSMPSKKRRYRTTFTTHQLDEL 162
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
E+ F RTHYPD+F RE +A K+GL EARIQV NR
Sbjct: 163 ERVFNRTHYPDIFLREEMAVKLGLTEARIQVWFQNR 198
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F RTHYPD+F RE +A K+GL EARIQV NR
Sbjct: 166 FNRTHYPDIFLREEMAVKLGLTEARIQVWFQNR 198
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 194 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 247
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 248 AMRTDLTEARVQVWFQNR 265
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 231 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 194 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 247
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 248 AMRTDLTEARVQVWFQNR 265
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 231 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
>gi|403268181|ref|XP_003926160.1| PREDICTED: retinal homeobox protein Rx [Saimiri boliviensis
boliviensis]
Length = 282
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR +
Sbjct: 133 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 192
Query: 164 AAQKEQQASAHNQTS 178
+K + +S Q S
Sbjct: 193 RQEKLEVSSMKLQDS 207
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 165 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 197
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 101 LRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
L LK+K +R RT+FT+ Q+ LEK FERTHYPDVF RE LA+++ L EAR+QV NR
Sbjct: 77 LLLKKK-RRYRTTFTSFQLRELEKAFERTHYPDVFTREDLANRVELTEARVQVWFQNR 133
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%)
Query: 223 RDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
R+ K FERTHYPDVF RE LA+++ L EAR+QV NR
Sbjct: 95 RELEKAFERTHYPDVFTREDLANRVELTEARVQVWFQNR 133
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 324 ISRDDAKGLVQ--QSARQVWFSNRRAKWRREEK 354
+R+D V+ ++ QVWF NRRAKWR++EK
Sbjct: 110 FTREDLANRVELTEARVQVWFQNRRAKWRKKEK 142
>gi|311275890|ref|XP_003134961.1| PREDICTED: short stature homeobox protein-like isoform 1 [Sus
scrofa]
Length = 300
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 102 EDVKSEDEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 157
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 158 EARVQVWFQNR 168
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 136 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 168
>gi|195429318|ref|XP_002062710.1| GK19597 [Drosophila willistoni]
gi|194158795|gb|EDW73696.1| GK19597 [Drosophila willistoni]
Length = 288
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 111 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 164
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 130 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 164
>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
Length = 292
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 48/66 (72%), Gaps = 5/66 (7%)
Query: 93 ADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D+++Q K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+Q
Sbjct: 94 SDDETQ-----KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 148
Query: 153 VSSINR 158
V NR
Sbjct: 149 VWFQNR 154
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 120 RAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 154
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 148 QVWFQNRRAKWRRQEKL 164
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 127 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 147 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 175 QVWFQNRRAKWRRQEKL 191
>gi|187608131|ref|NP_001119883.1| short stature homeobox protein isoform 1 [Danio rerio]
Length = 285
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Query: 88 EPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED+Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 94 EDVKSEDEDAQSKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 149
Query: 148 EARIQVSSINR 158
EAR+QV NR
Sbjct: 150 EARVQVWFQNR 160
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 128 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 160
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 118 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVNLPEVRVQVWFQNR 172
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 138 RAFEKSHYPDVYSREELAIKVNLPEVRVQVWFQNR 172
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 166 QVWFQNRRAKWRRQEKL 182
>gi|431902728|gb|ELK09016.1| Short stature homeobox protein [Pteropus alecto]
Length = 178
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 9/79 (11%)
Query: 80 ESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +L K +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 23 EKREDVKSE-----DEDGQTKL----KQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 73
Query: 140 LADKIGLPEARIQVSSINR 158
L+ ++GL EAR+QV NR
Sbjct: 74 LSQRLGLSEARVQVWFQNR 92
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ THYPD F RE L+ ++GL EAR+QV NR
Sbjct: 60 FDETHYPDAFMREELSQRLGLSEARVQVWFQNR 92
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 192 ASSDLPS-PLEKADSESS-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 245
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 246 AMRTDLTEARVQVWFQNR 263
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 229 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
>gi|24663288|ref|NP_524041.2| twin of eyg, isoform A [Drosophila melanogaster]
gi|17861690|gb|AAL39322.1| GH22493p [Drosophila melanogaster]
gi|23093606|gb|AAF49919.2| twin of eyg, isoform A [Drosophila melanogaster]
gi|220945522|gb|ACL85304.1| toe-PA [synthetic construct]
gi|220952758|gb|ACL88922.1| toe-PA [synthetic construct]
Length = 640
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 59 LALPH-NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
L+LP +P S + SR + DI E + S D D + K +RNRT+F+ E
Sbjct: 342 LSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSD-------QPKFRRNRTTFSPE 394
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
Q+D LEKEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 395 QLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 435
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 401 KEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 435
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 329 AKGLVQQSARQVWFSNRRAKWRREEKL 355
A+ + ++ QVWFSNRRAKWRR +++
Sbjct: 419 ARTALSEARVQVWFSNRRAKWRRHQRV 445
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 12 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 66
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 32 RAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 66
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 60 QVWFQNRRAKWRRQEKL 76
>gi|345484335|ref|XP_001599456.2| PREDICTED: paired mesoderm homeobox protein 2-like [Nasonia
vitripennis]
Length = 250
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
KRK +R RT+FTN Q++ LE+ F++THYPDVF RE LA +I L EAR+QV NR R
Sbjct: 93 KRKQRRYRTTFTNFQLEELERAFQKTHYPDVFFREELALRIQLTEARVQVWFQNR--RAK 150
Query: 164 AAQKEQQASAHN 175
++E+Q N
Sbjct: 151 WRKQEKQCKTDN 162
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ F++THYPDVF RE LA +I L EAR+QV NR R ++E+Q N
Sbjct: 113 RAFQKTHYPDVFFREELALRIQLTEARVQVWFQNR--RAKWRKQEKQCKTDN 162
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
A + +++D+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+
Sbjct: 175 APQERASADLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVY 228
Query: 136 ARERLADKIGLPEARIQVSSINR 158
ARE+LA + L EAR+QV NR
Sbjct: 229 AREQLAMRTDLTEARVQVWFQNR 251
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 217 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 251
>gi|171543907|ref|NP_001116404.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
gi|157410512|gb|ABV53979.1| diencephalon/mesencephalon homeobox 1 isoform Mbx-L [Oryzias
latipes]
Length = 434
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSIN------- 157
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV N
Sbjct: 105 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRK 164
Query: 158 --RVLRNLAAQKEQQASA 173
R L+ QK+++ASA
Sbjct: 165 KQRSLQKEQLQKQKEASA 182
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 9/59 (15%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSIN---------RVLRNLAAQKEQQASA 276
K F++THYPDV RERLA LPEAR+QV N R L+ QK+++ASA
Sbjct: 124 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEASA 182
>gi|301603585|ref|XP_002931449.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-B-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 117
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV RERLA LPEAR+QV NR
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 117
>gi|195124191|ref|XP_002006577.1| GI21136 [Drosophila mojavensis]
gi|193911645|gb|EDW10512.1| GI21136 [Drosophila mojavensis]
Length = 277
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 123 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 176
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 142 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 176
>gi|391332001|ref|XP_003740427.1| PREDICTED: uncharacterized protein LOC100907929 [Metaseiulus
occidentalis]
Length = 513
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 106 KLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K +RNRT+F+ EQ++ LE+EFE+THYP V RERLA K GL EAR+QV NR
Sbjct: 352 KFRRNRTTFSPEQLEVLEEEFEKTHYPCVDTRERLASKTGLSEARVQVWFSNR 404
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+EFE+THYP V RERLA K GL EAR+QV NR
Sbjct: 370 EEFEKTHYPCVDTRERLASKTGLSEARVQVWFSNR 404
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 6/81 (7%)
Query: 78 EHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ ++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+AR
Sbjct: 195 QDRASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAR 248
Query: 138 ERLADKIGLPEARIQVSSINR 158
E+LA + L EAR+QV NR
Sbjct: 249 EQLAMRTDLTEARVQVWFQNR 269
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 235 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 269
>gi|195327123|ref|XP_002030271.1| GM24657 [Drosophila sechellia]
gi|194119214|gb|EDW41257.1| GM24657 [Drosophila sechellia]
Length = 633
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 59 LALPH-NPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNE 117
L+LP +P S + SR + DI E + S D D + K +RNRT+F+ E
Sbjct: 338 LSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQDSD-------QPKFRRNRTTFSPE 390
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
Q+D LEKEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 391 QLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 431
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 397 KEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 431
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 329 AKGLVQQSARQVWFSNRRAKWRREEKL 355
A+ + ++ QVWFSNRRAKWRR +++
Sbjct: 415 ARTALSEARVQVWFSNRRAKWRRHQRV 441
>gi|444732546|gb|ELW72836.1| Retinal homeobox protein Rx [Tupaia chinensis]
Length = 286
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 132 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 186
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 152 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 186
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 325 SRDDAKGLVQ--QSARQVWFSNRRAKWRREEKL 355
SR++ G V + QVWF NRRAKWRR+EKL
Sbjct: 164 SREELAGKVNLPEVRVQVWFQNRRAKWRRQEKL 196
>gi|354470038|ref|XP_003497403.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 2
[Cricetulus griseus]
Length = 383
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 69 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 122
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV RERLA LPEAR+QV NR
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 122
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 104 KRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K+K +RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 127 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 147 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/17 (88%), Positives = 16/17 (94%)
Query: 339 QVWFSNRRAKWRREEKL 355
QVWF NRRAKWRR+EKL
Sbjct: 175 QVWFQNRRAKWRRQEKL 191
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 81 STSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
++SD+ S P AD +S K K +RNRT+FT+ Q++ LEK F++THYPDV+ARE+L
Sbjct: 192 ASSDLPS-PLEKADSESN-----KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQL 245
Query: 141 ADKIGLPEARIQVSSINR 158
A + L EAR+QV NR
Sbjct: 246 AMRTDLTEARVQVWFQNR 263
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 229 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
>gi|24659086|ref|NP_611756.1| CG9876 [Drosophila melanogaster]
gi|21626590|gb|AAF46956.2| CG9876 [Drosophila melanogaster]
gi|94400579|gb|ABF17914.1| FI01017p [Drosophila melanogaster]
Length = 275
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 115 RKPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 168
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K FERTHYPD F RE LA K+ L EAR+QV NR
Sbjct: 134 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR 168
>gi|354470034|ref|XP_003497402.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1 isoform 1
[Cricetulus griseus]
gi|344238464|gb|EGV94567.1| Diencephalon/mesencephalon homeobox protein 1 [Cricetulus griseus]
Length = 378
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 105 RKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
RK +R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 64 RKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 117
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV RERLA LPEAR+QV NR
Sbjct: 83 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNR 117
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.125 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,571,223,984
Number of Sequences: 23463169
Number of extensions: 392809303
Number of successful extensions: 1681662
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5916
Number of HSP's successfully gapped in prelim test: 2840
Number of HSP's that attempted gapping in prelim test: 1649086
Number of HSP's gapped (non-prelim): 31117
length of query: 490
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 343
effective length of database: 8,910,109,524
effective search space: 3056167566732
effective search space used: 3056167566732
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 79 (35.0 bits)