Your job contains 1 sequence.
>psy2181
MKVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPPPSPAHLA
LPHNPGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMRLRLKRKLQRNRTSFTNEQID
SLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET
VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKEFERTHYPDVFAR
ERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWY
PGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR
GSTGSVNSANTTTSTTALDHVPPTSQSPPPSSRLPLNPGGFNPSSMYSSIPQPAGMDSYN
PSCLQQAAREHHHHSSYSYMFHDSLHSLQSAYQRAAPAAHSSPHPHPAHPGSSPYGTSNS
VNGPPTSTGT
The BLAST search returned 14 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2181
(490 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0019650 - symbol:toy "twin of eyeless" species:722... 461 2.9e-50 2
ZFIN|ZDB-GENE-001031-1 - symbol:pax6b "paired box gene 6b... 319 3.0e-31 2
FB|FBgn0005558 - symbol:ey "eyeless" species:7227 "Drosop... 241 1.0e-30 3
RGD|3258 - symbol:Pax6 "paired box 6" species:10116 "Ratt... 324 3.4e-29 1
UNIPROTKB|Q1LZF1 - symbol:PAX6 "Paired box protein Pax-6"... 322 5.6e-29 1
UNIPROTKB|G3V3Q9 - symbol:PAX6 "Paired box protein Pax-6"... 322 5.6e-29 1
UNIPROTKB|P26367 - symbol:PAX6 "Paired box protein Pax-6"... 322 5.6e-29 1
UNIPROTKB|F2Z5M7 - symbol:PAX6 "Uncharacterized protein" ... 322 5.6e-29 1
MGI|MGI:97490 - symbol:Pax6 "paired box gene 6" species:1... 322 5.6e-29 1
UNIPROTKB|F1NF66 - symbol:PAX6 "Paired box protein Pax-6"... 321 7.1e-29 1
UNIPROTKB|F1NXF3 - symbol:PAX6 "Paired box protein Pax-6"... 321 7.1e-29 1
ZFIN|ZDB-GENE-990415-200 - symbol:pax6a "paired box gene ... 318 1.5e-28 1
UNIPROTKB|D3ZZT5 - symbol:Pax6 "Paired box protein Pax-6"... 293 6.6e-26 1
WB|WBGene00006870 - symbol:vab-3 species:6239 "Caenorhabd... 288 1.7e-25 2
UNIPROTKB|G5EDS1 - symbol:vab-3 "Protein VAB-3, isoform a... 288 1.7e-25 2
UNIPROTKB|F1M6K5 - symbol:Pax6 "Paired box protein Pax-6"... 238 2.0e-24 2
UNIPROTKB|G3V4N4 - symbol:PAX6 "Paired box gene 6 (Anirid... 272 1.2e-23 1
UNIPROTKB|G3V5W7 - symbol:PAX6 "Paired box protein Pax-6"... 272 1.2e-23 1
UNIPROTKB|E1BXC6 - symbol:PAX6 "Paired box protein Pax-6"... 271 1.6e-23 1
ZFIN|ZDB-GENE-081022-10 - symbol:zgc:193504 "zgc:193504" ... 233 3.4e-23 2
UNIPROTKB|F1M5I1 - symbol:Pax6 "Paired box protein Pax-6"... 253 2.1e-21 1
UNIPROTKB|G5EE71 - symbol:vab-3 "MAB-18" species:6239 "Ca... 224 1.1e-20 2
UNIPROTKB|G3V4M3 - symbol:PAX6 "Paired box protein Pax-6"... 237 1.4e-19 1
UNIPROTKB|P47237 - symbol:PAX6 "Paired box protein Pax-6"... 218 1.9e-17 1
UNIPROTKB|E9PIX4 - symbol:PAX6 "Paired box protein Pax-6"... 216 3.2e-17 1
UNIPROTKB|G3V567 - symbol:PAX6 "Paired box protein Pax-6"... 216 3.2e-17 1
UNIPROTKB|F1NXF7 - symbol:PAX6 "Paired box protein Pax-6"... 211 1.1e-16 1
UNIPROTKB|Q8MJI9 - symbol:PROP1 "Homeobox protein prophet... 158 2.6e-13 2
UNIPROTKB|E9PS79 - symbol:PAX6 "Paired box protein Pax-6"... 162 2.6e-13 2
WB|WBGene00000433 - symbol:ceh-8 species:6239 "Caenorhabd... 191 3.2e-13 1
UNIPROTKB|F1S615 - symbol:LOC100621405 "Uncharacterized p... 153 6.7e-13 2
UNIPROTKB|F1P7I2 - symbol:ALX3 "Uncharacterized protein" ... 153 6.7e-13 2
ZFIN|ZDB-GENE-001222-1 - symbol:vsx2 "visual system homeo... 160 7.7e-13 2
UNIPROTKB|Q9IAL1 - symbol:VSX2 "Visual system homeobox 2"... 158 1.1e-12 2
UNIPROTKB|Q5XKR4 - symbol:OTP "Homeobox protein orthopedi... 155 1.2e-12 2
UNIPROTKB|F2Z5H5 - symbol:OTP "Uncharacterized protein" s... 155 1.2e-12 2
MGI|MGI:99835 - symbol:Otp "orthopedia homolog (Drosophil... 155 1.2e-12 2
UNIPROTKB|G3V7E0 - symbol:Otp "Protein Otp" species:10116... 155 1.2e-12 2
UNIPROTKB|Q9GMA3 - symbol:VSX1 "Visual system homeobox 1"... 157 1.2e-12 2
UNIPROTKB|G3V3J3 - symbol:OTX2 "Homeobox protein OTX2" sp... 173 1.7e-12 1
UNIPROTKB|Q9PVY0 - symbol:RX1 "Retinal homeobox protein R... 173 1.7e-12 1
RGD|1305667 - symbol:Vsx1 "visual system homeobox 1" spec... 155 2.0e-12 2
UNIPROTKB|Q9IAL2 - symbol:VSX1 "Visual system homeobox 1"... 154 2.3e-12 2
ZFIN|ZDB-GENE-070712-3 - symbol:alx4a "aristaless-like ho... 157 2.6e-12 2
UNIPROTKB|F1N3B5 - symbol:VSX2 "Uncharacterized protein" ... 154 2.6e-12 2
UNIPROTKB|E2RTB3 - symbol:VSX2 "Uncharacterized protein" ... 154 2.6e-12 2
UNIPROTKB|P58304 - symbol:VSX2 "Visual system homeobox 2"... 154 2.6e-12 2
MGI|MGI:88401 - symbol:Vsx2 "visual system homeobox 2" sp... 154 2.6e-12 2
UNIPROTKB|G3V7K0 - symbol:Vsx2 "Ceh-10 homeo domain conta... 154 3.3e-12 2
UNIPROTKB|I3LGC8 - symbol:VSX1 "Uncharacterized protein" ... 152 4.7e-12 2
UNIPROTKB|O95076 - symbol:ALX3 "Homeobox protein aristale... 153 5.5e-12 2
UNIPROTKB|Q9NZR4 - symbol:VSX1 "Visual system homeobox 1"... 151 6.2e-12 2
UNIPROTKB|F1NYC8 - symbol:PAX7 "Uncharacterized protein" ... 188 6.6e-12 2
ZFIN|ZDB-GENE-990415-15 - symbol:arxa "aristaless related... 154 6.7e-12 2
UNIPROTKB|G3V3P9 - symbol:OTX2 "Homeobox protein OTX2" sp... 173 7.0e-12 1
UNIPROTKB|F1MC18 - symbol:ALX3 "Uncharacterized protein" ... 152 7.1e-12 2
UNIPROTKB|Q9GLL9 - symbol:PROP1 "Homeobox protein prophet... 152 8.8e-12 2
UNIPROTKB|Q0P031 - symbol:vsx1 "Visual system homeobox 1"... 148 1.1e-11 2
UNIPROTKB|E2RMI2 - symbol:VSX1 "Uncharacterized protein" ... 148 1.4e-11 2
UNIPROTKB|G3V309 - symbol:DUX4L2 "Double homeobox protein... 114 2.2e-11 2
UNIPROTKB|Q96QS3 - symbol:ARX "Homeobox protein ARX" spec... 152 2.3e-11 2
ZFIN|ZDB-GENE-980526-52 - symbol:pax3a "paired box gene 3... 184 2.8e-11 1
UNIPROTKB|E9PFV9 - symbol:PAX7 "Paired box protein Pax-7"... 179 3.5e-11 2
UNIPROTKB|P23759 - symbol:PAX7 "Paired box protein Pax-7"... 179 4.0e-11 2
UNIPROTKB|Q8NFW5 - symbol:DMBX1 "Diencephalon/mesencephal... 180 4.1e-11 1
UNIPROTKB|F1NH36 - symbol:Gga.55791 "Uncharacterized prot... 173 4.7e-11 1
UNIPROTKB|E1BKL5 - symbol:PAX7 "Uncharacterized protein" ... 177 6.0e-11 2
UNIPROTKB|O42349 - symbol:Pax-7 "PAX7 protein" species:90... 179 8.3e-11 2
UNIPROTKB|P32243 - symbol:OTX2 "Homeobox protein OTX2" sp... 173 9.4e-11 1
MGI|MGI:97451 - symbol:Otx2 "orthodenticle homolog 2 (Dro... 173 9.4e-11 1
UNIPROTKB|F1NYH7 - symbol:F1NYH7 "Uncharacterized protein... 157 9.8e-11 1
UNIPROTKB|F1PNX6 - symbol:PAX7 "Uncharacterized protein" ... 175 1.0e-10 2
UNIPROTKB|Q91813 - symbol:otx2-a "Homeobox protein OTX2-A... 172 1.2e-10 1
ZFIN|ZDB-GENE-990415-237 - symbol:rx2 "retinal homeobox g... 174 1.2e-10 1
UNIPROTKB|H0YIZ3 - symbol:PRRX2 "Paired mesoderm homeobox... 156 1.3e-10 1
UNIPROTKB|F2Z538 - symbol:F2Z538 "Uncharacterized protein... 156 1.3e-10 1
FB|FBgn0020617 - symbol:Rx "Retinal Homeobox" species:722... 181 1.3e-10 3
ZFIN|ZDB-GENE-990415-238 - symbol:rx3 "retinal homeobox g... 172 1.3e-10 1
UNIPROTKB|F1NZI9 - symbol:PRRX2 "Paired mesoderm homeobox... 155 1.6e-10 1
UNIPROTKB|Q90963 - symbol:PRRX2 "Paired mesoderm homeobox... 155 1.6e-10 1
UNIPROTKB|E1BF87 - symbol:PRRX2 "Uncharacterized protein"... 155 1.6e-10 1
UNIPROTKB|F1RSD4 - symbol:PRRX1 "Uncharacterized protein"... 155 1.6e-10 1
UNIPROTKB|G3V2N3 - symbol:PRRX1 "Paired mesoderm homeobox... 155 1.6e-10 1
UNIPROTKB|F1RQG1 - symbol:PRRX2 "Uncharacterized protein"... 155 1.6e-10 1
ZFIN|ZDB-GENE-990415-201 - symbol:pax7a "paired box gene ... 181 1.8e-10 2
UNIPROTKB|E1BNP1 - symbol:OTX2 "Uncharacterized protein" ... 170 2.2e-10 1
UNIPROTKB|F1SSM3 - symbol:OTX2 "Uncharacterized protein" ... 170 2.2e-10 1
UNIPROTKB|F1MTX0 - symbol:PAX3 "Uncharacterized protein" ... 166 2.3e-10 3
UNIPROTKB|E2QX72 - symbol:PAX3 "Uncharacterized protein" ... 166 2.4e-10 3
UNIPROTKB|E2RBA9 - symbol:OTX2 "Uncharacterized protein" ... 170 2.5e-10 1
UNIPROTKB|D2GVQ2 - symbol:OTX2 "Uncharacterized protein" ... 170 2.5e-10 1
UNIPROTKB|Q7YRX0 - symbol:RAX2 "Retina and anterior neura... 153 2.7e-10 1
UNIPROTKB|E2R5X4 - symbol:RAX2 "Uncharacterized protein" ... 153 2.7e-10 1
UNIPROTKB|Q96IS3 - symbol:RAX2 "Retina and anterior neura... 153 2.7e-10 1
UNIPROTKB|F1S7P4 - symbol:RAX2 "Uncharacterized protein" ... 153 2.7e-10 1
UNIPROTKB|P23760 - symbol:PAX3 "Paired box protein Pax-3"... 166 2.8e-10 3
MGI|MGI:97487 - symbol:Pax3 "paired box gene 3" species:1... 166 2.8e-10 3
WB|WBGene00044330 - symbol:alr-1 species:6239 "Caenorhabd... 172 2.9e-10 1
MGI|MGI:98218 - symbol:Prrx2 "paired related homeobox 2" ... 165 3.0e-10 1
UNIPROTKB|F1LMV3 - symbol:Pax3 "Protein Pax3" species:101... 166 3.1e-10 3
WARNING: Descriptions of 359 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0019650 [details] [associations]
symbol:toy "twin of eyeless" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0035214 "eye-antennal disc
development" evidence=IMP] [GO:0048749 "compound eye development"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0016319 "mushroom
body development" evidence=IMP] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0008056 "ocellus development" evidence=IGI;IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0016319
EMBL:AE014135 GO:GO:0048749 GO:GO:0048854 HSSP:P26367
GeneTree:ENSGT00680000099553 GO:GO:0008056 FlyBase:FBgn0019650
ChiTaRS:toy EMBL:AY051487 RefSeq:NP_524638.3 UniGene:Dm.1885
SMR:Q9V490 IntAct:Q9V490 MINT:MINT-774624 STRING:Q9V490
EnsemblMetazoa:FBtr0089185 GeneID:43833 KEGG:dme:Dmel_CG11186
UCSC:CG11186-RA CTD:43833 InParanoid:Q9V490 OMA:YMFHDPL
GenomeRNAi:43833 NextBio:836147 Uniprot:Q9V490
Length = 543
Score = 461 (167.3 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 118/235 (50%), Positives = 139/235 (59%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTXXXXXXXXXX 61
VSSINRVLRNLA+QKEQQA N E+VY+KLRMFNGQ G WAWYP +T
Sbjct: 145 VSSINRVLRNLASQKEQQAQQQN---ESVYEKLRMFNGQTGGWAWYPSNTTTAHLTLPPA 201
Query: 62 XXXXGSVTPIS----RDDAKE--------------HESTSDINSEPNSSADEDSQMXXXX 103
S +S RDD ++ H+STSD NSE NSS DEDSQM
Sbjct: 202 ASVVTSPANLSGQADRDDVQKRELQFSVEVSHTNSHDSTSDGNSEHNSSGDEDSQMRLRL 261
Query: 104 XXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNL 163
QRNRTSF+NEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV NR +
Sbjct: 262 KRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAK-- 319
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 218
++E++ ++++TV D +G+ A P T S + PG V
Sbjct: 320 -WRREEKMRTQRRSADTV-DG----SGRTSTANNPSGTTASSSVATSNNSTPGIV 368
Score = 213 (80.0 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 55/111 (49%), Positives = 72/111 (64%)
Query: 217 SVTPISRDDAKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
+ TP+ + A +++R P +FA R+RL ++++ + VSSINRVLRNLA+QKEQ
Sbjct: 104 ATTPVVQKIA-DYKR-ECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQ 161
Query: 273 QASAHNQTSETVYDKLRMFNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVT 322
QA N E+VY+KLRMFNGQ G WAWYP +T T AHL LP VT
Sbjct: 162 QAQQQN---ESVYEKLRMFNGQTGGWAWYPSNTTT---AHLTLPPAASVVT 206
Score = 207 (77.9 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 51/93 (54%), Positives = 62/93 (66%)
Query: 132 PDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL ++++ + VSSINRVLRNLA+QKEQQA N E+VY+KLRM
Sbjct: 120 PSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQAQQQN---ESVYEKLRM 176
Query: 188 FNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVT 219
FNGQ G WAWYP +T T AHL LP VT
Sbjct: 177 FNGQTGGWAWYPSNTTT---AHLTLPPAASVVT 206
Score = 167 (63.8 bits), Expect = 3.2e-31, Sum P(3) = 3.2e-31
Identities = 44/95 (46%), Positives = 56/95 (58%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEFERTHYPDVFARERLADKIGLPEARIQV NR + ++E++ ++++TV D
Sbjct: 282 KEFERTHYPDVFARERLADKIGLPEARIQVWFSNRRAK---WRREEKMRTQRRSADTV-D 337
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSV 321
+G+ A P T S + PG V
Sbjct: 338 G----SGRTSTANNPSGTTASSSVATSNNSTPGIV 368
Score = 114 (45.2 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 328 DAKGLVQQSAR-QVWFSNRRAKWRREEKLRNQRR 360
D GL + AR QVWFSNRRAKWRREEK+R QRR
Sbjct: 300 DKIGLPE--ARIQVWFSNRRAKWRREEKMRTQRR 331
Score = 79 (32.9 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 31/62 (50%), Positives = 35/62 (56%)
Query: 400 GFNPSSMYSSIPQP-AGM-DSYN-------PSCLQQAAREXXXXXXXXXMFHDSLHSLQS 450
GFN +MYSSIPQP A M ++YN PSCLQQ R+ MFHD L SL S
Sbjct: 425 GFN--TMYSSIPQPIATMAENYNSSLGSMTPSCLQQ--RDAYPY-----MFHDPL-SLGS 474
Query: 451 AY 452
Y
Sbjct: 475 PY 476
>ZFIN|ZDB-GENE-001031-1 [details] [associations]
symbol:pax6b "paired box gene 6b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002088 "lens development in camera-type eye"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0002089 "lens morphogenesis in camera-type
eye" evidence=IMP] [GO:0003310 "pancreatic A cell differentiation"
evidence=IMP] [GO:0003309 "type B pancreatic cell differentiation"
evidence=IMP] [GO:0003311 "pancreatic D cell differentiation"
evidence=IMP] [GO:0090104 "pancreatic epsilon cell differentiation"
evidence=IMP] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=IDA] [GO:2001141 "regulation of RNA
biosynthetic process" evidence=IDA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 ZFIN:ZDB-GENE-001031-1 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030902
GO:GO:0002089 GO:GO:0001071 HSSP:P26367 EMBL:BX000453 GO:GO:0003310
GO:GO:0003309 GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115
HOGENOM:HOG000230939 KO:K08031 GO:GO:0003311 GO:GO:0090104
EMBL:AF061252 IPI:IPI00630807 RefSeq:NP_571716.1 UniGene:Dr.132861
SMR:Q9YHZ8 STRING:Q9YHZ8 Ensembl:ENSDART00000145946 GeneID:60639
KEGG:dre:60639 CTD:60639 InParanoid:Q9YHZ8 OMA:SISHRNE
NextBio:20892425 Uniprot:Q9YHZ8
Length = 437
Score = 319 (117.4 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 85/183 (46%), Positives = 107/183 (58%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 139 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQPN 192
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
+D+ E+ T+ I+S N +++QM QRNRTSFT E
Sbjct: 193 QDGCQ---------QQDNGGEN--TNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQE 239
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK--EQQASAHN 175
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR + +K Q+ A N
Sbjct: 240 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 299
Query: 176 QTS 178
+S
Sbjct: 300 SSS 302
Score = 149 (57.5 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK--EQQASAHNQTS 281
KEFERTHYPDVFARERLA KI LPEARIQV NR + +K Q+ A N +S
Sbjct: 246 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNSSS 302
Score = 138 (53.6 bits), Expect = 7.9e-15, Sum P(3) = 7.9e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 95 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 153
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 154 QQMGA------DGMYDKLRMLNGQSGTWGTRPGWYPGTSVPGQP 191
Score = 135 (52.6 bits), Expect = 1.9e-17, Sum P(3) = 1.9e-17
Identities = 37/84 (44%), Positives = 48/84 (57%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +YDKLRM
Sbjct: 114 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYDKLRM 167
Query: 188 FNGQPG-WA----WYPGSTPTPSP 206
NGQ G W WYPG++ P
Sbjct: 168 LNGQSGTWGTRPGWYPGTSVPGQP 191
Score = 122 (48.0 bits), Expect = 7.9e-15, Sum P(3) = 7.9e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 252 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 295
Score = 40 (19.1 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 401 FNPSSMYSSIPQP 413
FN +S+Y +IPQP
Sbjct: 310 FN-TSVYQAIPQP 321
>FB|FBgn0005558 [details] [associations]
symbol:ey "eyeless" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=NAS;TAS] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=TAS] [GO:0016319 "mushroom body development"
evidence=IEP;IMP] [GO:0048749 "compound eye development"
evidence=IMP;NAS;TAS] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0043704 "photoreceptor cell fate specification" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043567
"regulation of insulin-like growth factor receptor signaling
pathway" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0048036 "central
complex development" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0045944 GO:GO:0040018 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705
GO:GO:0016319 EMBL:AE014135 GO:GO:0008347 GO:GO:0007628
GO:GO:0007455 GO:GO:0048854 GO:GO:0001745 GO:GO:0043567
eggNOG:NOG326044 GO:GO:0048036 EMBL:X79492 EMBL:X79493
EMBL:AF433696 EMBL:AF433697 EMBL:AF433698 EMBL:AF433699
EMBL:AF433700 EMBL:AF433701 EMBL:AF433702 EMBL:AF433703
EMBL:AF433704 EMBL:AF433705 PIR:I45557 RefSeq:NP_524628.2
RefSeq:NP_726607.1 UniGene:Dm.6503 ProteinModelPortal:O18381
SMR:O18381 DIP:DIP-46285N IntAct:O18381 MINT:MINT-320712
STRING:O18381 GeneID:43812 KEGG:dme:Dmel_CG1464 UCSC:CG1464-RA
CTD:43812 FlyBase:FBgn0005558 InParanoid:O18381 OrthoDB:EOG4GB5N6
GenomeRNAi:43812 NextBio:836011 Bgee:O18381 GermOnline:CG1464
GO:GO:0043704 Uniprot:O18381
Length = 857
Score = 241 (89.9 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 52/85 (61%), Positives = 55/85 (64%)
Query: 74 DDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPD 133
D+ E + N ED Q QRNRTSFTN+QIDSLEKEFERTHYPD
Sbjct: 397 DETGSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPD 456
Query: 134 VFARERLADKIGLPEARIQVSSINR 158
VFARERLA KIGLPEARIQV NR
Sbjct: 457 VFARERLAGKIGLPEARIQVWFSNR 481
Score = 153 (58.9 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 36/52 (69%), Positives = 36/52 (69%)
Query: 211 LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
L N S T D KEFERTHYPDVFARERLA KIGLPEARIQV NR
Sbjct: 430 LQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNR 481
Score = 121 (47.7 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQRR 360
QVWFSNRRAKWRREEKLRNQRR
Sbjct: 475 QVWFSNRRAKWRREEKLRNQRR 496
Score = 99 (39.9 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLAAQKEQQ
Sbjct: 132 TAEVVSKIS-QYKR-ECPSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQ 189
Query: 171 ASAHNQTS 178
++ +S
Sbjct: 190 STGSGSSS 197
Score = 97 (39.2 bits), Expect = 8.9e-10, Sum P(3) = 8.9e-10
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 235 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTS 281
P +FA R+RL + I VSSINRVLRNLAAQKEQQ++ +S
Sbjct: 147 PSIFAWEIRDRLLQENVCTNDNIPSVSSINRVLRNLAAQKEQQSTGSGSSS 197
Score = 89 (36.4 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTS 28
VSSINRVLRNLAAQKEQQ++ +S
Sbjct: 172 VSSINRVLRNLAAQKEQQSTGSGSSS 197
Score = 46 (21.3 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 21/73 (28%), Positives = 29/73 (39%)
Query: 275 SAHNQTSETVYDKLRMFNGQ----PGWAWYPGSTPT--PSPAHLALPHNPGSVTPISRDD 328
S E +Y+KLR+ N Q PG + P SP HL S + +
Sbjct: 251 SGEGSEQEAIYEKLRLLNTQHAAGPGPLEPARAAPLVGQSPNHLG---TRSSHPQLVHGN 307
Query: 329 AKGLVQQSARQVW 341
+ L QQ +Q W
Sbjct: 308 HQAL-QQHQQQSW 319
Score = 45 (20.9 bits), Expect = 3.7e-26, Sum P(3) = 3.7e-26
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 22 SAHNQTSETVYDKLRMFNGQ 41
S E +Y+KLR+ N Q
Sbjct: 251 SGEGSEQEAIYEKLRLLNTQ 270
Score = 45 (20.9 bits), Expect = 1.9e-13, Sum P(3) = 1.9e-13
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 172 SAHNQTSETVYDKLRMFNGQ 191
S E +Y+KLR+ N Q
Sbjct: 251 SGEGSEQEAIYEKLRLLNTQ 270
>RGD|3258 [details] [associations]
symbol:Pax6 "paired box 6" species:10116 "Rattus norvegicus"
[GO:0000790 "nuclear chromatin" evidence=ISO;IDA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=ISO;IC] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO;IC]
[GO:0001568 "blood vessel development" evidence=IEA;ISO] [GO:0001709
"cell fate determination" evidence=IEA;ISO] [GO:0001764 "neuron
migration" evidence=ISO;IMP] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA;ISO] [GO:0002088 "lens
development in camera-type eye" evidence=IEA;ISO] [GO:0003322
"pancreatic A cell development" evidence=ISO;IMP] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003680 "AT DNA binding" evidence=IDA]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0007224 "smoothened signaling pathway" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007417 "central nervous system development"
evidence=IEP] [GO:0007420 "brain development" evidence=ISO;IMP]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA;ISO]
[GO:0008134 "transcription factor binding" evidence=IEA;ISO]
[GO:0008285 "negative regulation of cell proliferation" evidence=ISO]
[GO:0009611 "response to wounding" evidence=IEA;ISO] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=ISO] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISO] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;IMP] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0021543 "pallium development" evidence=ISO]
[GO:0021778 "oligodendrocyte cell fate specification"
evidence=IEA;ISO] [GO:0021796 "cerebral cortex regionalization"
evidence=IEA;ISO] [GO:0021797 "forebrain anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA;ISO] [GO:0021902
"commitment of neuronal cell to specific neuron type in forebrain"
evidence=IEA;ISO] [GO:0021905 "forebrain-midbrain boundary formation"
evidence=IEA;ISO] [GO:0021912 "regulation of transcription from RNA
polymerase II promoter involved in spinal cord motor neuron fate
specification" evidence=IEA;ISO] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA;ISO] [GO:0021918
"regulation of transcription from RNA polymerase II promoter involved
in somatic motor neuron fate commitment" evidence=IEA;ISO]
[GO:0021983 "pituitary gland development" evidence=IEA;ISO]
[GO:0023019 "signal transduction involved in regulation of gene
expression" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030216 "keratinocyte differentiation"
evidence=IEA;ISO] [GO:0030334 "regulation of cell migration"
evidence=IEA;ISO] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA;ISO] [GO:0030900 "forebrain
development" evidence=ISO] [GO:0030902 "hindbrain development"
evidence=IDA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0032808 "lacrimal gland development"
evidence=IEA;ISO] [GO:0033365 "protein localization to organelle"
evidence=IEA;ISO] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA;ISO] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA;ISO] [GO:0042593 "glucose homeostasis" evidence=IEA;ISO]
[GO:0042660 "positive regulation of cell fate specification"
evidence=IMP] [GO:0043010 "camera-type eye development" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=RCA;IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0044424 "intracellular part" evidence=ISO]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045664
"regulation of neuron differentiation" evidence=IDA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IC] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048505
"regulation of timing of cell differentiation" evidence=IEA;ISO]
[GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA;ISO] [GO:0048708 "astrocyte differentiation"
evidence=IEA;ISO] [GO:0050678 "regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA;ISO] [GO:0050767
"regulation of neurogenesis" evidence=ISO;IMP] [GO:0050768 "negative
regulation of neurogenesis" evidence=ISS] [GO:0061072 "iris
morphogenesis" evidence=IEA;ISO] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA;ISO] [GO:0070410 "co-SMAD binding"
evidence=IEA;ISO] [GO:0070412 "R-SMAD binding" evidence=IEA;ISO]
[GO:0071837 "HMG box domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:3258 GO:GO:0001764
GO:GO:0045893 GO:GO:0045664 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0000981
GO:GO:0003690 GO:GO:0030902 GO:GO:0004842 GO:GO:0000979 GO:GO:0050768
GO:GO:0003680 GO:GO:0050678 GO:GO:0042660 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115 CTD:5080 KO:K08031
GO:GO:0003322 EMBL:U69644 EMBL:AY540905 EMBL:AY540906 EMBL:AJ627631
EMBL:BC128741 EMBL:S74393 IPI:IPI00231698 IPI:IPI00464480 PIR:S36166
RefSeq:NP_037133.1 UniGene:Rn.89724 ProteinModelPortal:P63016
SMR:P63016 STRING:P63016 Ensembl:ENSRNOT00000005882
Ensembl:ENSRNOT00000006302 GeneID:25509 KEGG:rno:25509 UCSC:RGD:3258
NextBio:606937 ArrayExpress:P63016 Genevestigator:P63016
GermOnline:ENSRNOG00000004410 Uniprot:P63016
Length = 422
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 85/183 (46%), Positives = 106/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G + E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 174 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 278
Query: 178 SET 180
S T
Sbjct: 279 SNT 281
Score = 149 (57.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 281
Score = 139 (54.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 136 (52.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 80 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 137
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 138 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 122 (48.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 233 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 276
>UNIPROTKB|Q1LZF1 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0050768 "negative regulation of neurogenesis" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0070412
"R-SMAD binding" evidence=IEA] [GO:0070410 "co-SMAD binding"
evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0042593 "glucose homeostasis" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0033365 "protein
localization to organelle" evidence=IEA] [GO:0032808 "lacrimal
gland development" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030216
"keratinocyte differentiation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0021918 "regulation of transcription from RNA
polymerase II promoter involved in somatic motor neuron fate
commitment" evidence=IEA] [GO:0021913 "regulation of transcription
from RNA polymerase II promoter involved in ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021912 "regulation of
transcription from RNA polymerase II promoter involved in spinal
cord motor neuron fate specification" evidence=IEA] [GO:0021905
"forebrain-midbrain boundary formation" evidence=IEA] [GO:0021902
"commitment of neuronal cell to specific neuron type in forebrain"
evidence=IEA] [GO:0021798 "forebrain dorsal/ventral pattern
formation" evidence=IEA] [GO:0021797 "forebrain anterior/posterior
pattern specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021778 "oligodendrocyte cell
fate specification" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0009950 "dorsal/ventral axis
specification" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007435 "salivary gland morphogenesis"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003322 "pancreatic A cell
development" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001709 "cell fate determination"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0030216 GO:GO:0009611 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0001568
GO:GO:0004842 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0061303 GO:GO:0030858 GO:GO:0007224 GO:GO:0050768
GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462
GO:GO:0021796 GO:GO:0021913 GO:GO:0032808 GO:GO:0021798
GO:GO:0048505 GO:GO:0021905 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 GO:GO:0048708 GO:GO:0061072
GO:GO:0021912 HOVERGEN:HBG009115 HOGENOM:HOG000230939 EMBL:BC116038
IPI:IPI00686718 RefSeq:NP_001035735.1 UniGene:Bt.11759
ProteinModelPortal:Q1LZF1 SMR:Q1LZF1 STRING:Q1LZF1 PRIDE:Q1LZF1
Ensembl:ENSBTAT00000005994 GeneID:286857 KEGG:bta:286857 CTD:5080
InParanoid:Q1LZF1 KO:K08031 OMA:NGQTGTW OrthoDB:EOG47PX63
NextBio:20806506 ArrayExpress:Q1LZF1 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 Uniprot:Q1LZF1
Length = 422
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 278
Query: 178 SET 180
S T
Sbjct: 279 SNT 281
Score = 149 (57.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 281
Score = 139 (54.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 136 (52.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 80 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 137
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 138 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 122 (48.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 233 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 276
>UNIPROTKB|G3V3Q9 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:Z83307
EMBL:Z95332 HGNC:HGNC:8620 ProteinModelPortal:G3V3Q9 SMR:G3V3Q9
Ensembl:ENST00000533333 ArrayExpress:G3V3Q9 Bgee:G3V3Q9
Uniprot:G3V3Q9
Length = 377
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 75 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 128
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 129 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 175
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 176 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 233
Query: 178 SET 180
S T
Sbjct: 234 SNT 236
Score = 149 (57.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 182 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 236
Score = 139 (54.0 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 31 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 89
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 90 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 127
Score = 136 (52.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 35 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 92
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 93 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 127
Score = 122 (48.0 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 188 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 231
>UNIPROTKB|P26367 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0001709 "cell fate determination" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0002088
"lens development in camera-type eye" evidence=IEA] [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
binding" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0021778
"oligodendrocyte cell fate specification" evidence=IEA] [GO:0021796
"cerebral cortex regionalization" evidence=IEA] [GO:0021797
"forebrain anterior/posterior pattern specification" evidence=IEA]
[GO:0021798 "forebrain dorsal/ventral pattern formation"
evidence=IEA] [GO:0021902 "commitment of neuronal cell to specific
neuron type in forebrain" evidence=IEA] [GO:0021905
"forebrain-midbrain boundary formation" evidence=IEA] [GO:0021912
"regulation of transcription from RNA polymerase II promoter
involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021913 "regulation of transcription from RNA
polymerase II promoter involved in ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021918 "regulation of
transcription from RNA polymerase II promoter involved in somatic
motor neuron fate commitment" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0048505 "regulation of
timing of cell differentiation" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IEA] [GO:0048708
"astrocyte differentiation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IMP] [GO:0061072 "iris morphogenesis" evidence=IMP]
[GO:0061303 "cornea development in camera-type eye" evidence=IMP]
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0050768 "negative regulation of neurogenesis" evidence=ISS]
[GO:0048663 "neuron fate commitment" evidence=NAS] [GO:0009611
"response to wounding" evidence=IEP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0007601 "visual perception" evidence=TAS] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0009887 "organ morphogenesis"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0001654 "eye development" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070412 "R-SMAD
binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IDA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0003322 "pancreatic A cell development"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0019901 "protein kinase binding" evidence=ISS] [GO:0035035
"histone acetyltransferase binding" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0019901
GO:GO:0009611 GO:GO:0007435 GO:GO:0007601 GO:GO:0045944
GO:GO:0045665 GO:GO:0007417 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042593 Orphanet:194 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0000981 GO:GO:0033365
GO:GO:0001568 GO:GO:0004842 GO:GO:0008134 GO:GO:0021983
GO:GO:0050680 GO:GO:0000979 GO:GO:0061303 GO:GO:0035035
GO:GO:0030858 GO:GO:0007224 GO:GO:0050768 GO:GO:0001709
GO:GO:0002052 GO:GO:0048663 GO:GO:0009950 GO:GO:0021797
Orphanet:893 GO:GO:0048596 GO:GO:0023019 GO:GO:0002088
GO:GO:0042462 MIM:604229 Orphanet:708 EMBL:Z83307 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 eggNOG:NOG326044 GO:GO:0048708 GO:GO:0061072
GO:GO:0021912 HOVERGEN:HBG009115 CTD:5080 KO:K08031 OMA:NGQTGTW
OrthoDB:EOG47PX63 GO:GO:0021902 GO:GO:0021778 GO:GO:0003322
GO:GO:0021918 EMBL:M77844 EMBL:M93650 EMBL:AY047583 EMBL:BX640762
EMBL:Z95332 EMBL:BC011953 IPI:IPI00218800 IPI:IPI00449071
PIR:A56674 RefSeq:NP_000271.1 RefSeq:NP_001121084.1
RefSeq:NP_001245391.1 RefSeq:NP_001245392.1 RefSeq:NP_001245393.1
RefSeq:NP_001245394.1 RefSeq:NP_001595.2 UniGene:Hs.270303
UniGene:Hs.611376 PDB:2CUE PDB:6PAX PDBsum:2CUE PDBsum:6PAX
ProteinModelPortal:P26367 SMR:P26367 IntAct:P26367
MINT:MINT-1465118 STRING:P26367 PhosphoSite:P26367 DMDM:6174889
PRIDE:P26367 DNASU:5080 Ensembl:ENST00000241001
Ensembl:ENST00000379107 Ensembl:ENST00000379109
Ensembl:ENST00000379111 Ensembl:ENST00000379115
Ensembl:ENST00000379123 Ensembl:ENST00000379129
Ensembl:ENST00000379132 Ensembl:ENST00000419022 GeneID:5080
KEGG:hsa:5080 UCSC:uc001mtd.4 GeneCards:GC11M031806 HGNC:HGNC:8620
HPA:CAB034143 HPA:HPA030775 MIM:106210 MIM:120200 MIM:120430
MIM:136520 MIM:148190 MIM:165550 MIM:206700 MIM:607108
neXtProt:NX_P26367 Orphanet:1065 Orphanet:2334 Orphanet:2253
Orphanet:250923 Orphanet:137902 Orphanet:35737 PharmGKB:PA32960
EvolutionaryTrace:P26367 GenomeRNAi:5080 NextBio:19596
ArrayExpress:P26367 Bgee:P26367 CleanEx:HS_PAX6
Genevestigator:P26367 GermOnline:ENSG00000007372 Uniprot:P26367
Length = 422
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 278
Query: 178 SET 180
S T
Sbjct: 279 SNT 281
Score = 149 (57.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 281
Score = 139 (54.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 136 (52.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 80 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 137
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 138 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 122 (48.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 233 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 276
>UNIPROTKB|F2Z5M7 [details] [associations]
symbol:PAX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0061303 "cornea development in
camera-type eye" evidence=IEA] [GO:0061072 "iris morphogenesis"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048505 "regulation of timing
of cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021918 "regulation of
transcription from RNA polymerase II promoter involved in somatic
motor neuron fate commitment" evidence=IEA] [GO:0021913 "regulation
of transcription from RNA polymerase II promoter involved in
ventral spinal cord interneuron specification" evidence=IEA]
[GO:0021912 "regulation of transcription from RNA polymerase II
promoter involved in spinal cord motor neuron fate specification"
evidence=IEA] [GO:0021905 "forebrain-midbrain boundary formation"
evidence=IEA] [GO:0021902 "commitment of neuronal cell to specific
neuron type in forebrain" evidence=IEA] [GO:0021798 "forebrain
dorsal/ventral pattern formation" evidence=IEA] [GO:0021797
"forebrain anterior/posterior pattern specification" evidence=IEA]
[GO:0021796 "cerebral cortex regionalization" evidence=IEA]
[GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0007435 "salivary gland
morphogenesis" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=IEA] [GO:0001568 "blood vessel development"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0009611
GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0000981 GO:GO:0033365
GO:GO:0001568 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0061303 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 GeneTree:ENSGT00680000099553 GO:GO:0048708
GO:GO:0061072 GO:GO:0021912 CTD:5080 KO:K08031 OMA:NGQTGTW
GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918
EMBL:CU463938 RefSeq:NP_001231101.1 RefSeq:NP_001231102.1
UniGene:Ssc.33027 ProteinModelPortal:F2Z5M7 SMR:F2Z5M7
Ensembl:ENSSSCT00000014546 GeneID:100514152 KEGG:ssc:100514152
Uniprot:F2Z5M7
Length = 422
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 278
Query: 178 SET 180
S T
Sbjct: 279 SNT 281
Score = 149 (57.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 281
Score = 139 (54.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 136 (52.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 80 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 137
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 138 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 122 (48.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 233 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 276
>MGI|MGI:97490 [details] [associations]
symbol:Pax6 "paired box gene 6" species:10090 "Mus musculus"
[GO:0000790 "nuclear chromatin" evidence=ISO;IDA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO;IDA]
[GO:0001568 "blood vessel development" evidence=ISO] [GO:0001709
"cell fate determination" evidence=IMP] [GO:0001764 "neuron
migration" evidence=ISO;IMP] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IMP] [GO:0002088 "lens
development in camera-type eye" evidence=IMP] [GO:0003322
"pancreatic A cell development" evidence=ISO;IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003680 "AT DNA binding" evidence=ISO]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0007224 "smoothened
signaling pathway" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007420
"brain development" evidence=ISO;IMP] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IGI;IMP] [GO:0009953
"dorsal/ventral pattern formation" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0010628 "positive
regulation of gene expression" evidence=ISO;IMP] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0021543 "pallium
development" evidence=IMP] [GO:0021778 "oligodendrocyte cell fate
specification" evidence=IMP] [GO:0021796 "cerebral cortex
regionalization" evidence=IMP] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IMP] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IMP]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IMP] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IMP] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IMP] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IMP] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IMP]
[GO:0021983 "pituitary gland development" evidence=IMP] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0030216 "keratinocyte differentiation" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IMP] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0032808 "lacrimal gland development" evidence=IMP] [GO:0033365
"protein localization to organelle" evidence=IMP] [GO:0035035
"histone acetyltransferase binding" evidence=IDA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042660 "positive regulation of cell
fate specification" evidence=ISO] [GO:0043010 "camera-type eye
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044424 "intracellular part"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI;IMP]
[GO:0045664 "regulation of neuron differentiation" evidence=ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IMP] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IGI] [GO:0048708 "astrocyte differentiation" evidence=IMP]
[GO:0050678 "regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0050767 "regulation of
neurogenesis" evidence=ISO;IMP] [GO:0061072 "iris morphogenesis"
evidence=ISO] [GO:0061303 "cornea development in camera-type eye"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=IDA]
[GO:0070412 "R-SMAD binding" evidence=ISO;IDA] [GO:0071837 "HMG box
domain binding" evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97490
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0030216
GO:GO:0009611 GO:GO:0007435 GO:GO:0045944 GO:GO:0045665
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0001568
GO:GO:0021983 GO:GO:0050680 GO:GO:0000979 GO:GO:0061303
GO:GO:0035035 GO:GO:0030858 GO:GO:0007224 GO:GO:0070412
GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462
UniGene:Mm.33870 GO:GO:0021796 GO:GO:0021913 GO:GO:0032808
GO:GO:0021798 GO:GO:0048505 GO:GO:0021905 GO:GO:0070410
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 GO:GO:0048708
GO:GO:0061072 GO:GO:0021912 HOVERGEN:HBG009115 CTD:5080 KO:K08031
OMA:NGQTGTW GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918
EMBL:X63963 EMBL:Y19196 EMBL:Y19199 EMBL:AK028059 EMBL:BC011272
EMBL:BC036957 EMBL:M77842 IPI:IPI00118638 IPI:IPI00459261
PIR:S42234 RefSeq:NP_001231127.1 RefSeq:NP_001231129.1
RefSeq:NP_001231130.1 RefSeq:NP_001231131.1 RefSeq:NP_038655.1
UniGene:Mm.3608 UniGene:Mm.487124 ProteinModelPortal:P63015
SMR:P63015 IntAct:P63015 MINT:MINT-1782085 STRING:P63015
PhosphoSite:P63015 PRIDE:P63015 Ensembl:ENSMUST00000090391
Ensembl:ENSMUST00000090397 Ensembl:ENSMUST00000111082
Ensembl:ENSMUST00000111083 Ensembl:ENSMUST00000111084
Ensembl:ENSMUST00000111085 Ensembl:ENSMUST00000111086
Ensembl:ENSMUST00000111087 Ensembl:ENSMUST00000167211 GeneID:18508
KEGG:mmu:18508 NextBio:294236 Bgee:P63015 CleanEx:MM_PAX6
Genevestigator:P63015 GermOnline:ENSMUSG00000027168 Uniprot:P63015
Length = 422
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 173
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 174 QDGCQQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 278
Query: 178 SET 180
S T
Sbjct: 279 SNT 281
Score = 149 (57.5 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 281
Score = 139 (54.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 136 (52.9 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 80 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 137
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 138 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 172
Score = 122 (48.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 233 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 276
>UNIPROTKB|F1NF66 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02040161 EMBL:AC140946
IPI:IPI00589493 Ensembl:ENSGALT00000019805 ArrayExpress:F1NF66
Uniprot:F1NF66
Length = 422
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 120 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 173
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 174 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 220
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 221 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 278
Query: 178 SET 180
S T
Sbjct: 279 SNT 281
Score = 150 (57.9 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 44/114 (38%), Positives = 58/114 (50%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 76 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 134
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG 319
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 135 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEG 182
Score = 149 (57.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 227 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 281
Score = 147 (56.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 43/111 (38%), Positives = 59/111 (53%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 80 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 137
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG 216
+ + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 138 GA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEG 182
Score = 122 (48.0 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 233 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 276
>UNIPROTKB|F1NXF3 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
"cell fate determination" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
development" evidence=IEA] [GO:0033365 "protein localization to
organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0009611 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
OMA:NGQTGTW EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00819256
Ensembl:ENSGALT00000040120 ArrayExpress:F1NXF3 Uniprot:F1NXF3
Length = 436
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 85/183 (46%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 134 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPA 187
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 188 QDGCPQQEGG-----------GENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 234
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT 177
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q
Sbjct: 235 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQA 292
Query: 178 SET 180
S T
Sbjct: 293 SNT 295
Score = 150 (57.9 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 44/114 (38%), Positives = 58/114 (50%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 90 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 148
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG 319
+Q + + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 149 QQMGA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEG 196
Score = 149 (57.5 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 241 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 295
Score = 147 (56.8 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 43/111 (38%), Positives = 59/111 (53%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 94 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 151
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG 216
+ + +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 152 GA------DGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEG 196
Score = 122 (48.0 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 247 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 290
>ZFIN|ZDB-GENE-990415-200 [details] [associations]
symbol:pax6a "paired box gene 6a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IMP] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0030900 "forebrain development" evidence=IGI]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=IDA] [GO:2001141 "regulation of RNA biosynthetic process"
evidence=IDA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-990415-200 GO:GO:0005634
GO:GO:0009952 GO:GO:0043565 GO:GO:0030900 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030902 GO:GO:0001071
GeneTree:ENSGT00680000099553 EMBL:AL929172 EMBL:BX004784
EMBL:CU927933 IPI:IPI00992852 Ensembl:ENSDART00000129319
ArrayExpress:F1QLC9 Bgee:F1QLC9 Uniprot:F1QLC9
Length = 461
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 84/183 (45%), Positives = 105/183 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +Y+KLRM NGQ G W WYPG++
Sbjct: 163 VSSINRVLRNLASEKQQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPN 216
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 217 QDGCQQSDGG-----------GENTNSISS--NGEDSDETQMRLQLKRKLQRNRTSFTQE 263
Query: 118 QIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK--EQQASAHN 175
QI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR + +K Q+ A N
Sbjct: 264 QIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASN 323
Query: 176 QTS 178
+S
Sbjct: 324 SSS 326
Score = 149 (57.5 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK--EQQASAHNQTS 281
KEFERTHYPDVFARERLA KI LPEARIQV NR + +K Q+ A N +S
Sbjct: 270 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNSSS 326
Score = 134 (52.2 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 40/104 (38%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 119 PRVATPEVVGKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 177
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +Y+KLRM NGQ G W WYPG++ P
Sbjct: 178 QQMGA------DGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQP 215
Score = 131 (51.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 132 PDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRM 187
P +FA R+RL + I VSSINRVLRNLA++K+Q + + +Y+KLRM
Sbjct: 138 PSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGA------DGMYEKLRM 191
Query: 188 FNGQPG-WA----WYPGSTPTPSP 206
NGQ G W WYPG++ P
Sbjct: 192 LNGQTGTWGTRPGWYPGTSVPGQP 215
Score = 122 (48.0 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 276 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 319
>UNIPROTKB|D3ZZT5 [details] [associations]
symbol:Pax6 "Paired box protein Pax-6" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:3258 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
IPI:IPI00207588 Ensembl:ENSRNOT00000006328 ArrayExpress:D3ZZT5
Uniprot:D3ZZT5
Length = 366
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 78/176 (44%), Positives = 99/176 (56%)
Query: 10 LRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXXXXXXXXX 64
LRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 113 LRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQ 166
Query: 65 XGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEK 124
G + E+T+ I+S N +++QM QRNRTSFT EQI++LEK
Sbjct: 167 EG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEK 213
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
EFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 214 EFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 267
Score = 149 (57.5 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 213 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 267
Score = 122 (48.0 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 219 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 262
Score = 106 (42.4 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 213 HNPGSVTPISRDDAKEFERTHYPDVFAR----ERLADKIGLPEARIQVSSINRVLRNLAA 268
+ GS+ P + +K R P+V ++ +R I E R ++ S LRNLA+
Sbjct: 61 YETGSIRPRAIGGSKP--RVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVFLRNLAS 118
Query: 269 QKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+K+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 119 EKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 158
Score = 100 (40.3 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 148 EARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTP 202
E R ++ S LRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 101 EIRDRLLSEGVFLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSV 154
Query: 203 TPSP 206
P
Sbjct: 155 PGQP 158
>WB|WBGene00006870 [details] [associations]
symbol:vab-3 species:6239 "Caenorhabditis elegans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0045138 "tail tip morphogenesis" evidence=IMP] [GO:0045165
"cell fate commitment" evidence=IMP] [GO:0030155 "regulation of
cell adhesion" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 GO:GO:0030155
GO:GO:0009952 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040039 GO:GO:0045138
GO:GO:0045165 HSSP:P26367 GeneTree:ENSGT00680000099553 EMBL:Z49937
EMBL:U31537 PIR:T20900 RefSeq:NP_001024570.1 UniGene:Cel.8982
SMR:G5EDS1 IntAct:G5EDS1 EnsemblMetazoa:F14F3.1a GeneID:181251
KEGG:cel:CELE_F14F3.1 CTD:181251 WormBase:F14F3.1a OMA:MSDAGHT
NextBio:913106 Uniprot:G5EDS1
Length = 455
Score = 288 (106.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 89/217 (41%), Positives = 109/217 (50%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXX 62
VSSINRVLRNLAA+KEQ QT +YD++R+ + P Y S
Sbjct: 121 VSSINRVLRNLAAKKEQVTM---QTE--LYDRIRIVDNFP----YNSSWYGQWPIPMNGA 171
Query: 63 XXXGSVTPISRDDAK-EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDS 121
P + K E E D + +P + ++D+ QRNRTSFT QI+S
Sbjct: 172 VGLNPFVPAPLIEPKTEGEFEKDEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIES 231
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 181
LEKEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S
Sbjct: 232 LEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGT 286
Query: 182 YDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP-GS 217
D + NG P TPTP + NP GS
Sbjct: 287 MDS-SLSNGTP--------TPTPGSVTGSNMTNPIGS 314
Score = 157 (60.3 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 49/112 (43%), Positives = 57/112 (50%)
Query: 211 LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ 269
L N S T + + KEFERTHYPDVFARERLA KI LPEARIQV NR A+
Sbjct: 217 LQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAK 271
Query: 270 KEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP-GS 320
++ N+ S D + NG P TPTP + NP GS
Sbjct: 272 WRREEKMRNKRSSGTMDS-SLSNGTP--------TPTPGSVTGSNMTNPIGS 314
Score = 136 (52.9 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 46/123 (37%), Positives = 68/123 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
T++ ++ +E +++R P +FA R++L AD I E VSSINRVLRNLAA+KEQ
Sbjct: 81 TSDVVEKIE-DYKRDQ-PSIFAWEIRDKLLADNICNNETIPSVSSINRVLRNLAAKKEQV 138
Query: 171 ASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK-E 228
QT +YD++R+ + P +WY G P P + L NP P+ + E
Sbjct: 139 TM---QTE--LYDRIRIVDNFPYNSSWY-GQWPIPMNGAVGL--NPFVPAPLIEPKTEGE 190
Query: 229 FER 231
FE+
Sbjct: 191 FEK 193
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 43/118 (36%), Positives = 62/118 (52%)
Query: 227 KEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSE 282
++++R P +FA R++L AD I E VSSINRVLRNLAA+KEQ QT
Sbjct: 89 EDYKRDQ-PSIFAWEIRDKLLADNICNNETIPSVSSINRVLRNLAAKKEQVTM---QTE- 143
Query: 283 TVYDKLRMFNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQ 339
+YD++R+ + P +WY G P P + L NP P+ +G ++ Q
Sbjct: 144 -LYDRIRIVDNFPYNSSWY-GQWPIPMNGAVGL--NPFVPAPLIEPKTEGEFEKDEDQ 197
Score = 110 (43.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWFSNRRAKWRREEK+RN+R
Sbjct: 262 QVWFSNRRAKWRREEKMRNKR 282
Score = 43 (20.2 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 404 SSMYSSIPQPAGMDSYN 420
S MY+ + QPA MD Y+
Sbjct: 340 SQMYAGLSQPA-MDPYS 355
>UNIPROTKB|G5EDS1 [details] [associations]
symbol:vab-3 "Protein VAB-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0030155 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040039
GO:GO:0045138 GO:GO:0045165 HSSP:P26367
GeneTree:ENSGT00680000099553 EMBL:Z49937 EMBL:U31537 PIR:T20900
RefSeq:NP_001024570.1 UniGene:Cel.8982 SMR:G5EDS1 IntAct:G5EDS1
EnsemblMetazoa:F14F3.1a GeneID:181251 KEGG:cel:CELE_F14F3.1
CTD:181251 WormBase:F14F3.1a OMA:MSDAGHT NextBio:913106
Uniprot:G5EDS1
Length = 455
Score = 288 (106.4 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 89/217 (41%), Positives = 109/217 (50%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXX 62
VSSINRVLRNLAA+KEQ QT +YD++R+ + P Y S
Sbjct: 121 VSSINRVLRNLAAKKEQVTM---QTE--LYDRIRIVDNFP----YNSSWYGQWPIPMNGA 171
Query: 63 XXXGSVTPISRDDAK-EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDS 121
P + K E E D + +P + ++D+ QRNRTSFT QI+S
Sbjct: 172 VGLNPFVPAPLIEPKTEGEFEKDEDQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIES 231
Query: 122 LEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV 181
LEKEFERTHYPDVFARERLA KI LPEARIQV NR A+ ++ N+ S
Sbjct: 232 LEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAKWRREEKMRNKRSSGT 286
Query: 182 YDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP-GS 217
D + NG P TPTP + NP GS
Sbjct: 287 MDS-SLSNGTP--------TPTPGSVTGSNMTNPIGS 314
Score = 157 (60.3 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 49/112 (43%), Positives = 57/112 (50%)
Query: 211 LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ 269
L N S T + + KEFERTHYPDVFARERLA KI LPEARIQV NR A+
Sbjct: 217 LQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAK 271
Query: 270 KEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP-GS 320
++ N+ S D + NG P TPTP + NP GS
Sbjct: 272 WRREEKMRNKRSSGTMDS-SLSNGTP--------TPTPGSVTGSNMTNPIGS 314
Score = 136 (52.9 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 46/123 (37%), Positives = 68/123 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
T++ ++ +E +++R P +FA R++L AD I E VSSINRVLRNLAA+KEQ
Sbjct: 81 TSDVVEKIE-DYKRDQ-PSIFAWEIRDKLLADNICNNETIPSVSSINRVLRNLAAKKEQV 138
Query: 171 ASAHNQTSETVYDKLRMFNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK-E 228
QT +YD++R+ + P +WY G P P + L NP P+ + E
Sbjct: 139 TM---QTE--LYDRIRIVDNFPYNSSWY-GQWPIPMNGAVGL--NPFVPAPLIEPKTEGE 190
Query: 229 FER 231
FE+
Sbjct: 191 FEK 193
Score = 126 (49.4 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 43/118 (36%), Positives = 62/118 (52%)
Query: 227 KEFERTHYPDVFA---RERL-ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSE 282
++++R P +FA R++L AD I E VSSINRVLRNLAA+KEQ QT
Sbjct: 89 EDYKRDQ-PSIFAWEIRDKLLADNICNNETIPSVSSINRVLRNLAAKKEQVTM---QTE- 143
Query: 283 TVYDKLRMFNGQP-GWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQ 339
+YD++R+ + P +WY G P P + L NP P+ +G ++ Q
Sbjct: 144 -LYDRIRIVDNFPYNSSWY-GQWPIPMNGAVGL--NPFVPAPLIEPKTEGEFEKDEDQ 197
Score = 110 (43.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWFSNRRAKWRREEK+RN+R
Sbjct: 262 QVWFSNRRAKWRREEKMRNKR 282
Score = 43 (20.2 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 404 SSMYSSIPQPAGMDSYN 420
S MY+ + QPA MD Y+
Sbjct: 340 SQMYAGLSQPA-MDPYS 355
>UNIPROTKB|F1M6K5 [details] [associations]
symbol:Pax6 "Paired box protein Pax-6" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 RGD:3258
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00949320
Ensembl:ENSRNOT00000065317 ArrayExpress:F1M6K5 Uniprot:F1M6K5
Length = 210
Score = 238 (88.8 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 61/137 (44%), Positives = 78/137 (56%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 93 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 146
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G + E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 147 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 193
Query: 118 QIDSLEKEFERTHYPDV 134
QI++LEKEFERTHYPDV
Sbjct: 194 QIEALEKEFERTHYPDV 210
Score = 139 (54.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 49 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 107
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 108 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 145
Score = 136 (52.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 53 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 110
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 111 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 145
Score = 63 (27.2 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 227 KEFERTHYPDV 237
KEFERTHYPDV
Sbjct: 200 KEFERTHYPDV 210
>UNIPROTKB|G3V4N4 [details] [associations]
symbol:PAX6 "Paired box gene 6 (Aniridia, keratitis),
isoform CRA_b" species:9606 "Homo sapiens" [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0002088 "lens development in
camera-type eye" evidence=IEA] [GO:0003322 "pancreatic A cell
development" evidence=IEA] [GO:0003680 "AT DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 EMBL:CH471064
GO:GO:0007435 GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0030334 GO:GO:0000790 GO:GO:0006366
GO:GO:0000981 GO:GO:0033365 GO:GO:0021983 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0002052 GO:GO:0009950 GO:GO:0021797 GO:GO:0048596
GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796
GO:GO:0021913 GO:GO:0032808 GO:GO:0021798 GO:GO:0048505
GO:GO:0021905 GO:GO:0048708 GO:GO:0021912 GO:GO:0021902
GO:GO:0021778 GO:GO:0003322 GO:GO:0021918 EMBL:Z95332
UniGene:Hs.270303 UniGene:Hs.611376 HGNC:HGNC:8620 SMR:G3V4N4
Ensembl:ENST00000470027 Ensembl:ENST00000494377 Uniprot:G3V4N4
Length = 286
Score = 272 (100.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 71/158 (44%), Positives = 88/158 (55%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTXXXXXXXXXXXXXXGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QM QRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 110 KIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 145
Score = 149 (57.5 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 91 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 145
Score = 122 (48.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 97 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 140
Score = 78 (32.5 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
++ +YDKLRM NGQ G W WYPG++ P
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 36
Score = 78 (32.5 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 281 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
++ +YDKLRM NGQ G W WYPG++ P
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 36
>UNIPROTKB|G3V5W7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V5W7 SMR:G3V5W7 Ensembl:ENST00000531910
ArrayExpress:G3V5W7 Bgee:G3V5W7 Uniprot:G3V5W7
Length = 162
Score = 272 (100.8 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 71/158 (44%), Positives = 88/158 (55%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTXXXXXXXXXXXXXXGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QM QRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 110 KIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 145
Score = 149 (57.5 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 91 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 145
Score = 122 (48.0 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 97 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 140
Score = 78 (32.5 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
++ +YDKLRM NGQ G W WYPG++ P
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 36
Score = 78 (32.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 281 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
++ +YDKLRM NGQ G W WYPG++ P
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 36
>UNIPROTKB|E1BXC6 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0001709
"cell fate determination" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007435 "salivary gland morphogenesis" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032808 "lacrimal gland
development" evidence=IEA] [GO:0033365 "protein localization to
organelle" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0042462 "eye photoreceptor cell
development" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048505 "regulation of timing of cell differentiation"
evidence=IEA] [GO:0048596 "embryonic camera-type eye morphogenesis"
evidence=IEA] [GO:0048708 "astrocyte differentiation" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0061072 "iris morphogenesis" evidence=IEA]
[GO:0061303 "cornea development in camera-type eye" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0070412 "R-SMAD
binding" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0009611 GO:GO:0045944
GO:GO:0042593 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030334
GO:GO:0000790 GO:GO:0000981 GO:GO:0033365 GO:GO:0050680
GO:GO:0000979 GO:GO:0030858 GO:GO:0007224 GO:GO:0001709
GO:GO:0023019 GO:GO:0048505 GeneTree:ENSGT00680000099553
EMBL:AADN02040161 EMBL:AC140946 IPI:IPI00602476
ProteinModelPortal:E1BXC6 SMR:E1BXC6 Ensembl:ENSGALT00000019804
ArrayExpress:E1BXC6 Uniprot:E1BXC6
Length = 286
Score = 271 (100.5 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 71/158 (44%), Positives = 88/158 (55%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTXXXXXXXXXXXXXXGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAD 142
+ I+S N +++QM QRNRTSFT EQI++LEKEFERTHYPDVFARERLA
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAA 109
Query: 143 KIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 110 KIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 145
Score = 149 (57.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 91 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 145
Score = 122 (48.0 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 97 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 140
Score = 89 (36.4 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG 216
++ +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEG 46
Score = 89 (36.4 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 281 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSPAHLALPHNPG 319
++ +YDKLRM NGQ G W WYPG++ PA P G
Sbjct: 3 ADGMYDKLRMLNGQTGTWGTRPGWYPGTSVPGQPAQDGCPQQEG 46
>ZFIN|ZDB-GENE-081022-10 [details] [associations]
symbol:zgc:193504 "zgc:193504" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-081022-10 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00680000099553
EMBL:FP236454 Ensembl:ENSDART00000151608 Bgee:I3IT91 Uniprot:I3IT91
Length = 275
Score = 233 (87.1 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 60/129 (46%), Positives = 69/129 (53%)
Query: 31 VYDKLRMFNGQPGWAWY-PGSTXXXXXXXXXXXXXXGSVTPISRDDAKEHESTSDINSEP 89
+YD L M N Q W P + G V ++ A E + E
Sbjct: 1 MYDNLTMLNLQNSSNWSGPNNWYHPADTITPQHGTDGCVEDLNVQMAGAGEGV--VQGER 58
Query: 90 NSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEA 149
+ +DSQ+ QRNRTSFT EQID+LEKEFERTHYPDVFARERLA KI LPEA
Sbjct: 59 DEV--DDSQLHLQLKRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAAKIDLPEA 116
Query: 150 RIQVSSINR 158
RIQV NR
Sbjct: 117 RIQVWFSNR 125
Score = 144 (55.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 91 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 125
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 35/113 (30%), Positives = 46/113 (40%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRRXXXXXXXXXXXXXXX 375
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 97 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRSGSSSSCSQTHTPLS 155
Query: 376 XXLD----HVXXXXXXXXXXXXXXXXXGGFNPSSMYSSIPQPAGMDSYNPSCL 424
+ H G++ S++SS+ + SC+
Sbjct: 156 TSFNSPVYHSHHSNSSGSMHSRSDSSLSGYSSLSVFSSMQSLPSQSTPTYSCM 208
Score = 57 (25.1 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 172 SAHNQTSETV--YDKLRMFNGQPGWAWYPG-STPTPSPAHLALPHNPGSVTPISRDDAKE 228
S H+++ ++ Y L +F+ P STPT S LP +P ++ P+SR
Sbjct: 173 SMHSRSDSSLSGYSSLSVFSSMQS---LPSQSTPTYS---CMLPPSPSALPPLSRKFDSS 226
Query: 229 FERTHYP 235
+ H P
Sbjct: 227 YTSPHLP 233
Score = 49 (22.3 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 275 SAHNQTSETV--YDKLRMFNGQPGWAWYPG-STPTPSPAHLALPHNPGSVTPISR 326
S H+++ ++ Y L +F+ P STPT S LP +P ++ P+SR
Sbjct: 173 SMHSRSDSSLSGYSSLSVFSSMQS---LPSQSTPTYS---CMLPPSPSALPPLSR 221
>UNIPROTKB|F1M5I1 [details] [associations]
symbol:Pax6 "Paired box protein Pax-6" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 RGD:3258
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00952223
Ensembl:ENSRNOT00000064080 ArrayExpress:F1M5I1 Uniprot:F1M5I1
Length = 305
Score = 253 (94.1 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 64/140 (45%), Positives = 81/140 (57%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTXXXXXX 57
VSSINRVLRNLA++K+Q + + +YDKLRM NGQ G W WYPG++
Sbjct: 185 VSSINRVLRNLASEKQQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPT 238
Query: 58 XXXXXXXXGSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNE 117
G + E+T+ I+S N +++QM QRNRTSFT E
Sbjct: 239 QDGCQQQEG-----------QGENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQE 285
Query: 118 QIDSLEKEFERTHYPDVFAR 137
QI++LEKEFERTHYPDVFAR
Sbjct: 286 QIEALEKEFERTHYPDVFAR 305
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 41/104 (39%), Positives = 55/104 (52%)
Query: 215 PGSVTPISRDDAKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 270
P TP +++R P +FA R+RL + I VSSINRVLRNLA++K
Sbjct: 141 PRVATPEVVSKIAQYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEK 199
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 309
+Q + + +YDKLRM NGQ G W WYPG++ P
Sbjct: 200 QQMGA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 237
Score = 136 (52.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINRVLRNLA++K+Q
Sbjct: 145 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQM 202
Query: 171 ASAHNQTSETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
+ + +YDKLRM NGQ G W WYPG++ P
Sbjct: 203 GA------DGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 237
Score = 78 (32.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 14/14 (100%), Positives = 14/14 (100%)
Query: 227 KEFERTHYPDVFAR 240
KEFERTHYPDVFAR
Sbjct: 292 KEFERTHYPDVFAR 305
>UNIPROTKB|G5EE71 [details] [associations]
symbol:vab-3 "MAB-18" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030155 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0040039
GO:GO:0045138 GO:GO:0045165 HSSP:P06601
GeneTree:ENSGT00680000099553 EMBL:Z49937 UniGene:Cel.8982
GeneID:181251 KEGG:cel:CELE_F14F3.1 CTD:181251 NextBio:913106
EMBL:U29184 PIR:S60251 RefSeq:NP_001024572.1 SMR:G5EE71
IntAct:G5EE71 EnsemblMetazoa:F14F3.1c WormBase:F14F3.1c
Uniprot:G5EE71
Length = 296
Score = 224 (83.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 60/133 (45%), Positives = 73/133 (54%)
Query: 86 NSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ +P + ++D+ QRNRTSFT QI+SLEKEFERTHYPDVFARERLA KI
Sbjct: 37 DQKPPTEPEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQ 96
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPS 205
LPEARIQV NR A+ ++ N+ S D + NG P TPTP
Sbjct: 97 LPEARIQVWFSNR-----RAKWRREEKMRNKRSSGTMDS-SLSNGTP--------TPTPG 142
Query: 206 PAHLALPHNP-GS 217
+ NP GS
Sbjct: 143 SVTGSNMTNPIGS 155
Score = 157 (60.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 49/112 (43%), Positives = 57/112 (50%)
Query: 211 LPHNPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ 269
L N S T + + KEFERTHYPDVFARERLA KI LPEARIQV NR A+
Sbjct: 58 LQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQVWFSNR-----RAK 112
Query: 270 KEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP-GS 320
++ N+ S D + NG P TPTP + NP GS
Sbjct: 113 WRREEKMRNKRSSGTMDS-SLSNGTP--------TPTPGSVTGSNMTNPIGS 155
Score = 110 (43.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 339 QVWFSNRRAKWRREEKLRNQR 359
QVWFSNRRAKWRREEK+RN+R
Sbjct: 103 QVWFSNRRAKWRREEKMRNKR 123
Score = 43 (20.2 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 404 SSMYSSIPQPAGMDSYN 420
S MY+ + QPA MD Y+
Sbjct: 181 SQMYAGLSQPA-MDPYS 196
>UNIPROTKB|G3V4M3 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z83307 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V4M3 SMR:G3V4M3 Ensembl:ENST00000531633
ArrayExpress:G3V4M3 Bgee:G3V4M3 Uniprot:G3V4M3
Length = 302
Score = 237 (88.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 55/101 (54%), Positives = 67/101 (66%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E+T+ I+S N +++QM QRNRTSFT EQI++LEKEFERTHYPDVFARER
Sbjct: 14 ENTNSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARER 71
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 180
LA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 72 LAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 110
Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 56 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 110
Score = 122 (48.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 62 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 105
>UNIPROTKB|P47237 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG326044
GeneTree:ENSGT00680000099553 HOVERGEN:HBG009115
HOGENOM:HOG000230939 EMBL:S69508 IPI:IPI00819463 PIR:I51234
UniGene:Gga.556 ProteinModelPortal:P47237 SMR:P47237 STRING:P47237
Ensembl:ENSGALT00000040116 ArrayExpress:P47237 Uniprot:P47237
Length = 216
Score = 218 (81.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 50/83 (60%), Positives = 56/83 (67%)
Query: 98 QMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSIN 157
QM QRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV N
Sbjct: 1 QMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSN 60
Query: 158 RVLRNLAAQKEQQASAHNQTSET 180
R R ++E+ + Q S T
Sbjct: 61 R--RAKWRREEKLRNQRRQASNT 81
Score = 149 (57.5 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 27 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 81
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 33 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 76
>UNIPROTKB|E9PIX4 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
IPI:IPI00975481 ProteinModelPortal:E9PIX4 SMR:E9PIX4
Ensembl:ENST00000464174 ArrayExpress:E9PIX4 Bgee:E9PIX4
Uniprot:E9PIX4
Length = 221
Score = 216 (81.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 48/73 (65%), Positives = 54/73 (73%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
QRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++
Sbjct: 10 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRRE 67
Query: 168 EQQASAHNQTSET 180
E+ + Q S T
Sbjct: 68 EKLRNQRRQASNT 80
Score = 149 (57.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 26 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 80
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 32 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 75
>UNIPROTKB|G3V567 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007411 GO:GO:0001764 GO:GO:0030216 GO:GO:0007435
GO:GO:0045944 GO:GO:0045665 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 GO:GO:0000790 GO:GO:0006366 GO:GO:0000981
GO:GO:0033365 GO:GO:0021983 GO:GO:0050680 GO:GO:0000979
GO:GO:0030858 GO:GO:0007224 GO:GO:0001709 GO:GO:0002052
GO:GO:0009950 GO:GO:0021797 GO:GO:0048596 GO:GO:0023019
GO:GO:0002088 GO:GO:0042462 EMBL:Z83307 GO:GO:0021796 GO:GO:0021913
GO:GO:0032808 GO:GO:0021798 GO:GO:0048505 GO:GO:0021905
GO:GO:0048708 GO:GO:0021912 GO:GO:0021902 GO:GO:0021778
GO:GO:0003322 GO:GO:0021918 EMBL:Z95332 HGNC:HGNC:8620
ProteinModelPortal:G3V567 SMR:G3V567 Ensembl:ENST00000530373
ArrayExpress:G3V567 Bgee:G3V567 Uniprot:G3V567
Length = 128
Score = 216 (81.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 48/73 (65%), Positives = 54/73 (73%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
QRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR R ++
Sbjct: 10 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRRE 67
Query: 168 EQQASAHNQTSET 180
E+ + Q S T
Sbjct: 68 EKLRNQRRQASNT 80
Score = 149 (57.5 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 35/57 (61%), Positives = 39/57 (68%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSET 283
KEFERTHYPDVFARERLA KI LPEARIQV NR R ++E+ + Q S T
Sbjct: 26 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR--RAKWRREEKLRNQRRQASNT 80
Score = 122 (48.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 316 HNPGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKLRNQRR 360
H P V R AK + ++ QVWFSNRRAKWRREEKLRNQRR
Sbjct: 32 HYP-DVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRR 75
>UNIPROTKB|F1NXF7 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02040161 EMBL:AC140946
IPI:IPI00572110 Ensembl:ENSGALT00000040112 ArrayExpress:F1NXF7
Uniprot:F1NXF7
Length = 186
Score = 211 (79.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 43/51 (84%), Positives = 45/51 (88%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
QRNRTSFT EQI++LEKEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 127 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 177
Score = 144 (55.7 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
KEFERTHYPDVFARERLA KI LPEARIQV NR
Sbjct: 143 KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNR 177
Score = 44 (20.5 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQ 170
T E + + +++R P +FA R+RL + I VSSINR+ R L +
Sbjct: 76 TPEVVSKIA-QYKR-ECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRLKRKLQRNRTSF 133
Query: 171 ASAHNQTSETVYDK 184
+ E +++
Sbjct: 134 TQEQIEALEKEFER 147
>UNIPROTKB|Q8MJI9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9913 "Bos taurus" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0001568 GO:GO:0009953
GO:GO:0000976 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 EMBL:AF453510 EMBL:AF453511
EMBL:AF453512 IPI:IPI00697381 RefSeq:NP_777103.1 UniGene:Bt.11213
ProteinModelPortal:Q8MJI9 SMR:Q8MJI9 STRING:Q8MJI9
Ensembl:ENSBTAT00000009680 GeneID:282563 KEGG:bta:282563 CTD:5626
eggNOG:NOG293463 HOGENOM:HOG000115706 HOVERGEN:HBG053691
InParanoid:Q8MJI9 KO:K09327 OrthoDB:EOG4BZN3X NextBio:20806292
GO:GO:0048850 Uniprot:Q8MJI9
Length = 226
Score = 158 (60.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 45/126 (35%), Positives = 59/126 (46%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+F+ Q++ LE F R YPD++ARE LA GL EARIQV NR R A Q+
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNR--R--AKQR 125
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 227
+Q+ S + F +P P S PTP P PH P
Sbjct: 126 KQERSLLQPLAHLSPATFSGFLPEPPSC--PYSYPTPPPPMTCFPHPYNRALPSQPSTGS 183
Query: 228 EFERTH 233
F R +
Sbjct: 184 SFARPY 189
Score = 122 (48.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/116 (32%), Positives = 48/116 (41%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F R YPD++ARE LA GL EARIQV NR R A Q++Q+ S +
Sbjct: 88 FGRNQYPDIWARESLAQDTGLSEARIQVWFQNR--R--AKQRKQERSLLQPLAHLSPATF 143
Query: 289 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWFSN 344
F +P P S PTP P PH P + + W+ N
Sbjct: 144 SGFLPEPPSC--PYSYPTPPPPMTCFPHPYNRALPSQPSTGSSFARPYQSEDWYPN 197
Score = 63 (27.2 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 299 WYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
WYP PTP+ HLA P P + P+S + K
Sbjct: 194 WYPNLHPTPA-GHLACPPPP-PMLPLSLEPPK 223
>UNIPROTKB|E9PS79 [details] [associations]
symbol:PAX6 "Paired box protein Pax-6" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0001709 "cell fate determination" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002052 "positive regulation
of neuroblast proliferation" evidence=IEA] [GO:0002088 "lens
development in camera-type eye" evidence=IEA] [GO:0003322
"pancreatic A cell development" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007435
"salivary gland morphogenesis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009950
"dorsal/ventral axis specification" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0021778 "oligodendrocyte
cell fate specification" evidence=IEA] [GO:0021796 "cerebral cortex
regionalization" evidence=IEA] [GO:0021797 "forebrain
anterior/posterior pattern specification" evidence=IEA] [GO:0021798
"forebrain dorsal/ventral pattern formation" evidence=IEA]
[GO:0021902 "commitment of neuronal cell to specific neuron type in
forebrain" evidence=IEA] [GO:0021905 "forebrain-midbrain boundary
formation" evidence=IEA] [GO:0021912 "regulation of transcription
from RNA polymerase II promoter involved in spinal cord motor
neuron fate specification" evidence=IEA] [GO:0021913 "regulation of
transcription from RNA polymerase II promoter involved in ventral
spinal cord interneuron specification" evidence=IEA] [GO:0021918
"regulation of transcription from RNA polymerase II promoter
involved in somatic motor neuron fate commitment" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030902 "hindbrain development"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032808 "lacrimal gland development"
evidence=IEA] [GO:0033365 "protein localization to organelle"
evidence=IEA] [GO:0035035 "histone acetyltransferase binding"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0042660 "positive regulation of cell fate
specification" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048505 "regulation of timing of cell
differentiation" evidence=IEA] [GO:0048596 "embryonic camera-type
eye morphogenesis" evidence=IEA] [GO:0048708 "astrocyte
differentiation" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0070410 "co-SMAD
binding" evidence=IEA] [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0071837 "HMG box domain binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 GO:GO:0007411
GO:GO:0001764 GO:GO:0030216 GO:GO:0007435 GO:GO:0045944
GO:GO:0045665 Gene3D:1.10.10.60 GO:GO:0030334 GO:GO:0000790
GO:GO:0006366 GO:GO:0000981 GO:GO:0033365 GO:GO:0021983
GO:GO:0050680 GO:GO:0000979 GO:GO:0030858 GO:GO:0007224
GO:GO:0001709 GO:GO:0002052 GO:GO:0009950 GO:GO:0021797
GO:GO:0048596 GO:GO:0023019 GO:GO:0002088 GO:GO:0042462 EMBL:Z83307
GO:GO:0021796 GO:GO:0021913 GO:GO:0032808 GO:GO:0021798
GO:GO:0048505 GO:GO:0021905 GO:GO:0048708 GO:GO:0021912
GO:GO:0021902 GO:GO:0021778 GO:GO:0003322 GO:GO:0021918 EMBL:Z95332
HGNC:HGNC:8620 IPI:IPI00973245 ProteinModelPortal:E9PS79 SMR:E9PS79
Ensembl:ENST00000471303 ArrayExpress:E9PS79 Bgee:E9PS79
Uniprot:E9PS79
Length = 97
Score = 162 (62.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 43/108 (39%), Positives = 56/108 (51%)
Query: 28 SETVYDKLRMFNGQPG-WA----WYPGSTXXXXXXXXXXXXXXGSVTPISRDDAKEHEST 82
++ +YDKLRM NGQ G W WYPG++ G E+T
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGG-----------GENT 51
Query: 83 SDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTH 130
+ I+S N +++QM QRNRTSFT EQI++LEKEFERTH
Sbjct: 52 NSISS--NGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTH 97
Score = 78 (32.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 178 SETVYDKLRMFNGQPG-WA----WYPGSTPTPSP 206
++ +YDKLRM NGQ G W WYPG++ P
Sbjct: 3 ADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQP 36
Score = 39 (18.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 227 KEFERTH 233
KEFERTH
Sbjct: 91 KEFERTH 97
>WB|WBGene00000433 [details] [associations]
symbol:ceh-8 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=TAS] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007389
GeneTree:ENSGT00700000104279 eggNOG:NOG261733 EMBL:Z81143
PIR:T27812 RefSeq:NP_492246.2 UniGene:Cel.19040
ProteinModelPortal:Q94398 SMR:Q94398 IntAct:Q94398
EnsemblMetazoa:ZK265.4 GeneID:191617 KEGG:cel:CELE_ZK265.4
UCSC:ZK265.4 CTD:191617 WormBase:ZK265.4 InParanoid:Q94398
OMA:DKKQRRN NextBio:949694 Uniprot:Q94398
Length = 276
Score = 191 (72.3 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 50/141 (35%), Positives = 74/141 (52%)
Query: 81 STSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ + +S P+ S+ +RNRT+FT Q+ +LE F++THYPDV+ARE L
Sbjct: 34 SSFESDSSPSKSSSSRKNRDKIADKKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETL 93
Query: 141 ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYP-G 199
A K+ LPE R+QV NR R ++E+Q + ++ D + P W+W
Sbjct: 94 AAKVQLPEVRVQVWFQNR--RAKFRRQEKQ-DCQGEEKHSLKDTM------PSWSWMSEN 144
Query: 200 STPTPS---PAH-LALPHNPG 216
T TP PA+ L+ HN G
Sbjct: 145 KTDTPPMLPPANTLSSTHNNG 165
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/96 (38%), Positives = 52/96 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F++THYPDV+ARE LA K+ LPE R+QV NR R ++E+Q + ++ D +
Sbjct: 79 FDKTHYPDVYARETLAAKVQLPEVRVQVWFQNR--RAKFRRQEKQ-DCQGEEKHSLKDTM 135
Query: 289 RMFNGQPGWAWYP-GSTPTPS---PAH-LALPHNPG 319
P W+W T TP PA+ L+ HN G
Sbjct: 136 ------PSWSWMSENKTDTPPMLPPANTLSSTHNNG 165
>UNIPROTKB|F1S615 [details] [associations]
symbol:LOC100621405 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:CU137690 Ensembl:ENSSSCT00000007462 Uniprot:F1S615
Length = 254
Score = 153 (58.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 89 PNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L E
Sbjct: 46 PLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTE 105
Query: 149 ARIQVSSINR 158
AR+QV NR
Sbjct: 106 ARVQVWFQNR 115
Score = 104 (41.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 81 KVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNR 115
Score = 76 (31.8 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ E+
Sbjct: 109 QVWFQNRRAKWRKRER 124
Score = 44 (20.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 189 NGQPGWAWYPGSTPTPSPAHLALPHNPGSV 218
+G PG PSP PH+ G+V
Sbjct: 163 SGSPGGPCLVSPEGIPSPCMSPYPHSHGNV 192
Score = 44 (20.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 292 NGQPGWAWYPGSTPTPSPAHLALPHNPGSV 321
+G PG PSP PH+ G+V
Sbjct: 163 SGSPGGPCLVSPEGIPSPCMSPYPHSHGNV 192
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 198 PGSTPTPSPAHLALPHNPGSVTPISRDDAK 227
PGS P P A L +P +PG P S + AK
Sbjct: 33 PGS-PGPCLASLRVPLSPG--LPDSMELAK 59
>UNIPROTKB|F1P7I2 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104013
OMA:PYSHPHG EMBL:AAEX03004725 EMBL:AAEX03004724
Ensembl:ENSCAFT00000031481 Uniprot:F1P7I2
Length = 254
Score = 153 (58.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 89 PNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L E
Sbjct: 46 PLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTE 105
Query: 149 ARIQVSSINR 158
AR+QV NR
Sbjct: 106 ARVQVWFQNR 115
Score = 76 (31.8 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ E+
Sbjct: 109 QVWFQNRRAKWRKRER 124
>ZFIN|ZDB-GENE-001222-1 [details] [associations]
symbol:vsx2 "visual system homeobox 2" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-001222-1 GO:GO:0007275 GO:GO:0005634
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251
OrthoDB:EOG4QVCCV EMBL:U62898 EMBL:BC055588 EMBL:BC067664
IPI:IPI00501002 IPI:IPI00506942 UniGene:Dr.75766
ProteinModelPortal:O42477 SMR:O42477 ArrayExpress:O42477
Uniprot:O42477
Length = 393
Score = 160 (61.4 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P+SR EH ++ +S+ SS++ S + +R+RT FT+ Q++ LEK
Sbjct: 124 PLSRTVGPLEHNQSASSDSDDVSSSERKMSKSSLSQSKKRKKRRHRTIFTSYQLEELEKA 183
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 184 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 216
Score = 79 (32.9 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 210 QVWFQNRRAKWRKREK 225
>UNIPROTKB|Q9IAL1 [details] [associations]
symbol:VSX2 "Visual system homeobox 2" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005737
GO:GO:0008285 GO:GO:0005730 GO:GO:0008284 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0045165 eggNOG:NOG237888 HOGENOM:HOG000115909 KO:K09336
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251 EMBL:AF178671
IPI:IPI00600652 RefSeq:NP_990099.1 UniGene:Gga.289
ProteinModelPortal:Q9IAL1 SMR:Q9IAL1 Ensembl:ENSGALT00000016606
GeneID:395536 KEGG:gga:395536 CTD:338917 InParanoid:Q9IAL1
OMA:FSKPEYQ OrthoDB:EOG4QVCCV NextBio:20815613 Uniprot:Q9IAL1
Length = 377
Score = 158 (60.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 39/93 (41%), Positives = 53/93 (56%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P++R + + T+ +SE SS+D S + +R+RT FT+ Q++ LEK
Sbjct: 126 PLARAPGQLDSSQTASSDSEDVSSSDRKMSKSSLNQSKKRKKRRHRTIFTSYQLEELEKA 185
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 186 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 218
Score = 79 (32.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 212 QVWFQNRRAKWRKREK 227
>UNIPROTKB|Q5XKR4 [details] [associations]
symbol:OTP "Homeobox protein orthopedia" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0021985 "neurohypophysis
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 HSSP:P06601 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D CTD:23440 EMBL:BC001800 IPI:IPI00029796
RefSeq:NP_115485.1 UniGene:Hs.202247 ProteinModelPortal:Q5XKR4
SMR:Q5XKR4 STRING:Q5XKR4 DMDM:74762283 PRIDE:Q5XKR4 DNASU:23440
Ensembl:ENST00000306422 GeneID:23440 KEGG:hsa:23440 UCSC:uc003kfg.3
GeneCards:GC05M076960 HGNC:HGNC:8518 HPA:HPA039365 MIM:604529
neXtProt:NX_Q5XKR4 PharmGKB:PA32844 HOGENOM:HOG000039976
InParanoid:Q5XKR4 OMA:RWATAGM PhylomeDB:Q5XKR4 GenomeRNAi:23440
NextBio:45713 Bgee:Q5XKR4 CleanEx:HS_OTP Genevestigator:Q5XKR4
GO:GO:0021979 GO:GO:0021985 Uniprot:Q5XKR4
Length = 325
Score = 155 (59.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQVSSINR 158
L E+R+QV NR
Sbjct: 143 LTESRVQVWFQNR 155
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 331 GLVQQSARQVWFSNRRAKWRREEKLRN 357
GL + S QVWF NRRAKW++ +K N
Sbjct: 142 GLTE-SRVQVWFQNRRAKWKKRKKTTN 167
>UNIPROTKB|F2Z5H5 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
GO:GO:0021879 GO:GO:0002052 OMA:RWATAGM GO:GO:0021979 GO:GO:0021985
EMBL:CU856635 RefSeq:XP_003123766.1 ProteinModelPortal:F2Z5H5
SMR:F2Z5H5 Ensembl:ENSSSCT00000015401 GeneID:100520724
KEGG:ssc:100520724 Uniprot:F2Z5H5
Length = 325
Score = 155 (59.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQVSSINR 158
L E+R+QV NR
Sbjct: 143 LTESRVQVWFQNR 155
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 331 GLVQQSARQVWFSNRRAKWRREEKLRN 357
GL + S QVWF NRRAKW++ +K N
Sbjct: 142 GLTE-SRVQVWFQNRRAKWKKRKKTTN 167
>MGI|MGI:99835 [details] [associations]
symbol:Otp "orthopedia homolog (Drosophila)" species:10090
"Mus musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IMP] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0021985 "neurohypophysis development"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:99835 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0000976 GO:GO:0021879
GO:GO:0002052 eggNOG:NOG256838 HOVERGEN:HBG001617 OrthoDB:EOG4FXR8D
CTD:23440 HOGENOM:HOG000039976 OMA:RWATAGM GO:GO:0021979
GO:GO:0021985 EMBL:Y10413 IPI:IPI00114250 RefSeq:NP_035151.1
UniGene:Mm.42051 ProteinModelPortal:O09113 SMR:O09113 STRING:O09113
PRIDE:O09113 DNASU:18420 Ensembl:ENSMUST00000022195 GeneID:18420
KEGG:mmu:18420 UCSC:uc007rly.1 InParanoid:O09113 NextBio:294068
Bgee:O09113 CleanEx:MM_OTP Genevestigator:O09113
GermOnline:ENSMUSG00000021685 Uniprot:O09113
Length = 325
Score = 155 (59.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQVSSINR 158
L E+R+QV NR
Sbjct: 143 LTESRVQVWFQNR 155
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 331 GLVQQSARQVWFSNRRAKWRREEKLRN 357
GL + S QVWF NRRAKW++ +K N
Sbjct: 142 GLTE-SRVQVWFQNRRAKWKKRKKTTN 167
>UNIPROTKB|G3V7E0 [details] [associations]
symbol:Otp "Protein Otp" species:10116 "Rattus norvegicus"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:727945 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0000976
EMBL:CH473955 CTD:23440 OMA:RWATAGM RefSeq:NP_001093993.1
UniGene:Rn.7202 ProteinModelPortal:G3V7E0 SMR:G3V7E0 PRIDE:G3V7E0
Ensembl:ENSRNOT00000014036 GeneID:294640 KEGG:rno:294640
NextBio:638354 Uniprot:G3V7E0
Length = 325
Score = 155 (59.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQVSSINR 158
L E+R+QV NR
Sbjct: 143 LTESRVQVWFQNR 155
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 331 GLVQQSARQVWFSNRRAKWRREEKLRN 357
GL + S QVWF NRRAKW++ +K N
Sbjct: 142 GLTE-SRVQVWFQNRRAKWKKRKKTTN 167
>UNIPROTKB|Q9GMA3 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 GO:GO:0060040
GO:GO:0042551 eggNOG:NOG237888 HOGENOM:HOG000115909
InterPro:IPR023339 PROSITE:PS51496 EMBL:AF251032 IPI:IPI00716722
RefSeq:NP_777192.1 UniGene:Bt.5555 ProteinModelPortal:Q9GMA3
SMR:Q9GMA3 PRIDE:Q9GMA3 Ensembl:ENSBTAT00000004329 GeneID:286802
KEGG:bta:286802 CTD:30813 HOVERGEN:HBG036251 InParanoid:Q9GMA3
KO:K09335 OMA:WGSDHLK OrthoDB:EOG4907B0 NextBio:20806456
Uniprot:Q9GMA3
Length = 365
Score = 157 (60.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 38/87 (43%), Positives = 47/87 (54%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHY 131
+R E STSD +S P+ + +R+RT FT Q++ LEK F HY
Sbjct: 130 ARQKRSESVSTSDEDS-PSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELEKAFSEAHY 188
Query: 132 PDVFARERLADKIGLPEARIQVSSINR 158
PDV+ARE LA K LPE RIQV NR
Sbjct: 189 PDVYAREMLAMKTELPEDRIQVWFQNR 215
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 209 QVWFQNRRAKWRKREK 224
>UNIPROTKB|G3V3J3 [details] [associations]
symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AL161757 HGNC:HGNC:8522
ProteinModelPortal:G3V3J3 SMR:G3V3J3 Ensembl:ENST00000555804
ArrayExpress:G3V3J3 Bgee:G3V3J3 Uniprot:G3V3J3
Length = 163
Score = 173 (66.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ A + P +P S++
Sbjct: 99 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASIS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 130 (50.8 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
R + + G + P ST P+ A + P +P S++P+S
Sbjct: 117 PAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASISPLS 161
>UNIPROTKB|Q9PVY0 [details] [associations]
symbol:RX1 "Retinal homeobox protein Rx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GeneTree:ENSGT00700000104256
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 EMBL:AB015750 EMBL:AF420601
IPI:IPI00599352 RefSeq:NP_989435.2 UniGene:Gga.48437
UniGene:Gga.55791 ProteinModelPortal:Q9PVY0 SMR:Q9PVY0 PRIDE:Q9PVY0
Ensembl:ENSGALT00000032299 GeneID:373893 KEGG:gga:373893 CTD:30062
InParanoid:Q9PVY0 KO:K09332 NextBio:20813425 ArrayExpress:Q9PVY0
Uniprot:Q9PVY0
Length = 228
Score = 173 (66.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 51/149 (34%), Positives = 75/149 (50%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D E D P ++A+E+ +RNRT+FT Q+ LE+ FE++HYPDV
Sbjct: 9 DLGELRKPGDSEGTPPAAAEEEQPKKKH-----RRNRTTFTTYQLHELERAFEKSHYPDV 63
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK-LRMFNGQPG 193
++RE LA K+ LPE R+QV NR + Q++ +AS S ++D + FN P
Sbjct: 64 YSREELAMKVNLPEVRVQVWFQNRRAK-WRRQEKMEAS-----SMKLHDTPMLSFNRPP- 116
Query: 194 WAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
T P +LP +P +PIS
Sbjct: 117 ------MTANVGPMSNSLPLDPWLTSPIS 139
Score = 121 (47.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 36/100 (36%), Positives = 53/100 (53%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + Q++ +AS S ++D
Sbjct: 53 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK-WRRQEKMEAS-----SMKLHD 106
Query: 287 K-LRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P T P +LP +P +PIS
Sbjct: 107 TPMLSFNRPP-------MTANVGPMSNSLPLDPWLTSPIS 139
>RGD|1305667 [details] [associations]
symbol:Vsx1 "visual system homeobox 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007601
"visual perception" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0042551 "neuron maturation"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=ISO]
[GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1305667 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR023339
PROSITE:PS51496 IPI:IPI00877372 Ensembl:ENSRNOT00000009723
UCSC:RGD:1305667 Uniprot:D3ZV45
Length = 360
Score = 155 (59.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 78 EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
E+ STSD +S P+ ++ +R+RT FT Q++ LEK F HYPDV+AR
Sbjct: 140 ENISTSDGDS-PSEEKNDPKMSLTLGKRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAR 198
Query: 138 ERLADKIGLPEARIQVSSINR 158
E LA K LPE RIQV NR
Sbjct: 199 EMLAVKTELPEDRIQVWFQNR 219
Score = 79 (32.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 213 QVWFQNRRAKWRKREK 228
>UNIPROTKB|Q9IAL2 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG237888
HOGENOM:HOG000115909 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 OrthoDB:EOG4907B0 EMBL:AF178670
IPI:IPI00577521 RefSeq:NP_990100.1 UniGene:Gga.3158
ProteinModelPortal:Q9IAL2 SMR:Q9IAL2 GeneID:395537 KEGG:gga:395537
InParanoid:Q9IAL2 NextBio:20815614 Uniprot:Q9IAL2
Length = 350
Score = 154 (59.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 39/84 (46%), Positives = 47/84 (55%)
Query: 76 AKEH-ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDV 134
A+ H ES SD +S + A E +R+RT FT Q++ LEK F HYPDV
Sbjct: 126 ARRHKESASDEDSL-SGDASELKMPASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDV 184
Query: 135 FARERLADKIGLPEARIQVSSINR 158
+ARE LA K LPE RIQV NR
Sbjct: 185 YAREMLAVKTELPEDRIQVWFQNR 208
Score = 79 (32.9 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 202 QVWFQNRRAKWRKREK 217
>ZFIN|ZDB-GENE-070712-3 [details] [associations]
symbol:alx4a "aristaless-like homeobox 4a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-070712-3 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 KO:K09451 EMBL:BX510305
IPI:IPI00800494 RefSeq:XP_001340966.1 UniGene:Dr.115666
Ensembl:ENSDART00000124363 GeneID:100006399 KEGG:dre:100006399
CTD:100006399 NextBio:20787094 Uniprot:E7FGP3
Length = 368
Score = 157 (60.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 66 GSVTPISRDDAKE-HESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEK 124
GS + K ++TS++ S + + E ++ +RNRT+FT+ Q++ LEK
Sbjct: 139 GSYLSVKDSGVKSPQQATSELASPLDKTEGESNK------GKKRRNRTTFTSYQLEELEK 192
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 193 VFQKTHYPDVYAREQLALRTDLTEARVQVWFQNR 226
Score = 76 (31.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ E+
Sbjct: 220 QVWFQNRRAKWRKRER 235
>UNIPROTKB|F1N3B5 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0008285 GO:GO:0005730
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0045165
GO:GO:0060040 KO:K09336 InterPro:IPR023339 PROSITE:PS51496
CTD:338917 OMA:FSKPEYQ EMBL:DAAA02029609 IPI:IPI00716073
RefSeq:NP_001180179.1 UniGene:Bt.106523 Ensembl:ENSBTAT00000019481
GeneID:528647 KEGG:bta:528647 NextBio:20874875 Uniprot:F1N3B5
Length = 361
Score = 154 (59.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P+ R + T+ +SE SS+D S + +R+RT FT+ Q++ LEK
Sbjct: 107 PLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKA 166
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 167 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 199
Score = 79 (32.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 193 QVWFQNRRAKWRKREK 208
>UNIPROTKB|E2RTB3 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008285
GO:GO:0005730 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0045165 GO:GO:0060040 KO:K09336 InterPro:IPR023339
PROSITE:PS51496 CTD:338917 OMA:FSKPEYQ EMBL:AAEX03005845
RefSeq:XP_547902.3 Ensembl:ENSCAFT00000026767 GeneID:490780
KEGG:cfa:490780 Uniprot:E2RTB3
Length = 361
Score = 154 (59.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P+ R + T+ +SE SS+D S + +R+RT FT+ Q++ LEK
Sbjct: 107 PLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKA 166
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 167 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 199
Score = 79 (32.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 193 QVWFQNRRAKWRKREK 208
>UNIPROTKB|P58304 [details] [associations]
symbol:VSX2 "Visual system homeobox 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0060040 "retinal bipolar neuron differentiation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005737 GO:GO:0008285
GO:GO:0005730 EMBL:CH471061 GO:GO:0008284 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Orphanet:98938 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0045165
GO:GO:0060040 Orphanet:2543 Orphanet:2542 eggNOG:NOG237888
HOGENOM:HOG000115909 KO:K09336 InterPro:IPR023339 PROSITE:PS51496
HOVERGEN:HBG036251 CTD:338917 OMA:FSKPEYQ OrthoDB:EOG4QVCCV
EMBL:AY336059 EMBL:AC005519 EMBL:AC006349 EMBL:BC128153
IPI:IPI00033487 RefSeq:NP_878314.1 UniGene:Hs.449771
ProteinModelPortal:P58304 SMR:P58304 IntAct:P58304 STRING:P58304
PhosphoSite:P58304 DMDM:17374365 PaxDb:P58304 PRIDE:P58304
Ensembl:ENST00000261980 GeneID:338917 KEGG:hsa:338917
UCSC:uc001xpq.3 GeneCards:GC14P074706 HGNC:HGNC:1975 HPA:HPA003436
MIM:142993 MIM:610092 MIM:610093 neXtProt:NX_P58304
PharmGKB:PA26511 InParanoid:P58304 PhylomeDB:P58304
GenomeRNAi:338917 NextBio:97195 Bgee:P58304 CleanEx:HS_VSX2
Genevestigator:P58304 Uniprot:P58304
Length = 361
Score = 154 (59.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P+ R + T+ +SE SS+D S + +R+RT FT+ Q++ LEK
Sbjct: 107 PLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKA 166
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 167 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 199
Score = 79 (32.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 193 QVWFQNRRAKWRKREK 208
>MGI|MGI:88401 [details] [associations]
symbol:Vsx2 "visual system homeobox 2" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0043010 "camera-type eye
development" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IMP] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:88401 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0008284 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0045165 GO:GO:0060040 eggNOG:NOG237888 KO:K09336
InterPro:IPR023339 PROSITE:PS51496 HOVERGEN:HBG036251 CTD:338917
OrthoDB:EOG4QVCCV EMBL:L34808 EMBL:BC031869 IPI:IPI00990176
PIR:I49594 RefSeq:NP_031727.1 UniGene:Mm.4405
ProteinModelPortal:Q61412 SMR:Q61412 IntAct:Q61412 STRING:Q61412
PhosphoSite:Q61412 PRIDE:Q61412 Ensembl:ENSMUST00000021665
GeneID:12677 KEGG:mmu:12677 InParanoid:Q61412 ChiTaRS:Vsx2
NextBio:281922 Bgee:Q61412 CleanEx:MM_VSX2 Genevestigator:Q61412
GermOnline:ENSMUSG00000021239 Uniprot:Q61412
Length = 361
Score = 154 (59.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P+ R + T+ +SE SS+D S + +R+RT FT+ Q++ LEK
Sbjct: 107 PLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKA 166
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 167 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 199
Score = 79 (32.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 193 QVWFQNRRAKWRKREK 208
>UNIPROTKB|G3V7K0 [details] [associations]
symbol:Vsx2 "Ceh-10 homeo domain containing homolog (C.
elegans), isoform CRA_b" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 EMBL:CH473982 InterPro:IPR023339
PROSITE:PS51496 OMA:FSKPEYQ UniGene:Rn.214211
Ensembl:ENSRNOT00000015889 Uniprot:G3V7K0
Length = 380
Score = 154 (59.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
P+ R + T+ +SE SS+D S + +R+RT FT+ Q++ LEK
Sbjct: 107 PLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIFTSYQLEELEKA 166
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 167 FNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 199
Score = 79 (32.9 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 193 QVWFQNRRAKWRKREK 208
>UNIPROTKB|I3LGC8 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040 "retinal
bipolar neuron differentiation" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 OMA:WGSDHLK EMBL:FP565328
Ensembl:ENSSSCT00000025097 Uniprot:I3LGC8
Length = 365
Score = 152 (58.6 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 41/94 (43%), Positives = 49/94 (52%)
Query: 66 GSVTPIS-RDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEK 124
G P S R E STS+ +S P +D +R+RT FT Q++ LEK
Sbjct: 123 GRSPPTSIRQKRSESVSTSEEDSLPEDRSDLKLPPTPGKRKK-RRHRTVFTAHQLEELEK 181
Query: 125 EFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 182 AFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNR 215
Score = 79 (32.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 209 QVWFQNRRAKWRKREK 224
>UNIPROTKB|O95076 [details] [associations]
symbol:ALX3 "Homeobox protein aristaless-like 3"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
specification process" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 EMBL:CH471122
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
GO:GO:0048704 EMBL:AF008202 EMBL:AF008203 EMBL:AL160006
EMBL:BC112007 EMBL:BC113428 IPI:IPI00028290 RefSeq:NP_006483.2
UniGene:Hs.669953 ProteinModelPortal:O95076 SMR:O95076
STRING:O95076 PhosphoSite:O95076 PRIDE:O95076
Ensembl:ENST00000369792 GeneID:257 KEGG:hsa:257 UCSC:uc001dzb.3
CTD:257 GeneCards:GC01M110602 H-InvDB:HIX0023725 H-InvDB:HIX0159682
HGNC:HGNC:449 MIM:136760 MIM:606014 neXtProt:NX_O95076 Orphanet:250
PharmGKB:PA24754 eggNOG:NOG292934 HOVERGEN:HBG004213
InParanoid:O95076 KO:K09323 OMA:PYSHPHG OrthoDB:EOG40K810
PhylomeDB:O95076 GenomeRNAi:257 NextBio:1013 Bgee:O95076
CleanEx:HS_ALX3 Genevestigator:O95076 GermOnline:ENSG00000156150
GO:GO:0007389 Uniprot:O95076
Length = 343
Score = 153 (58.9 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 89 PNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L E
Sbjct: 135 PLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTE 194
Query: 149 ARIQVSSINR 158
AR+QV NR
Sbjct: 195 ARVQVWFQNR 204
Score = 76 (31.8 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ E+
Sbjct: 198 QVWFQNRRAKWRKRER 213
>UNIPROTKB|Q9NZR4 [details] [associations]
symbol:VSX1 "Visual system homeobox 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0042551 "neuron
maturation" evidence=IEA] [GO:0060040 "retinal bipolar neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL080312 GO:GO:0060040
GO:GO:0042551 Orphanet:98973 eggNOG:NOG237888 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
EMBL:AF176797 EMBL:AF251033 EMBL:AF251034 EMBL:DQ854807
EMBL:DQ854808 EMBL:DQ854809 EMBL:DQ854810 EMBL:DQ854811
EMBL:DQ854812 EMBL:BC126228 EMBL:BC136497 EMBL:GU138372
IPI:IPI00165074 IPI:IPI00215633 IPI:IPI00215634 IPI:IPI00215635
IPI:IPI00886819 IPI:IPI00909178 IPI:IPI00915914 IPI:IPI00943354
RefSeq:NP_001243200.1 RefSeq:NP_001243201.1 RefSeq:NP_055403.2
RefSeq:NP_955457.1 UniGene:Hs.274264 ProteinModelPortal:Q9NZR4
SMR:Q9NZR4 STRING:Q9NZR4 PhosphoSite:Q9NZR4 DMDM:25009572
PRIDE:Q9NZR4 Ensembl:ENST00000376707 Ensembl:ENST00000376709
Ensembl:ENST00000398332 Ensembl:ENST00000409285
Ensembl:ENST00000409958 Ensembl:ENST00000424574
Ensembl:ENST00000429762 Ensembl:ENST00000444511
Ensembl:ENST00000451258 GeneID:30813 KEGG:hsa:30813 UCSC:uc002wuf.3
UCSC:uc002wug.1 UCSC:uc010gdd.2 UCSC:uc010gdf.2
GeneCards:GC20M025051 HGNC:HGNC:12723 MIM:122000 MIM:148300
MIM:605020 MIM:614195 neXtProt:NX_Q9NZR4 Orphanet:2335
PharmGKB:PA37334 InParanoid:Q9NZR4 PhylomeDB:Q9NZR4
GenomeRNAi:30813 NextBio:52864 Bgee:Q9NZR4 CleanEx:HS_VSX1
Genevestigator:Q9NZR4 GermOnline:ENSG00000100987 Uniprot:Q9NZR4
Length = 365
Score = 151 (58.2 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 37/88 (42%), Positives = 47/88 (53%)
Query: 71 ISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTH 130
+ R + STSD +S+ D + +R+RT FT Q++ LEK F H
Sbjct: 129 LGRQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKK-RRHRTVFTAHQLEELEKAFSEAH 187
Query: 131 YPDVFARERLADKIGLPEARIQVSSINR 158
YPDV+ARE LA K LPE RIQV NR
Sbjct: 188 YPDVYAREMLAVKTELPEDRIQVWFQNR 215
Score = 79 (32.9 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 209 QVWFQNRRAKWRKREK 224
>UNIPROTKB|F1NYC8 [details] [associations]
symbol:PAX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
EMBL:AADN02040715 EMBL:AADN02040716 EMBL:AADN02040717
EMBL:AADN02040718 EMBL:AADN02040719 EMBL:AADN02040720
EMBL:AADN02040721 IPI:IPI00601478 Ensembl:ENSGALT00000013968
ArrayExpress:F1NYC8 Uniprot:F1NYC8
Length = 503
Score = 188 (71.2 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 81/255 (31%), Positives = 107/255 (41%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 193 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 252
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 253 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 297
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER-------THYPDVFARERLADKIGLPEARIQ 255
T P L P + T IS+D R T + A AD AR
Sbjct: 298 TLPPYQL--PDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAADSSSAYGARHS 355
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALP 315
SS + N AA N S V L +G P P + + SP H L
Sbjct: 356 FSSYSDSFMNAAAPANHMNPVSNGLSPQVMSILSNPSGVPP---QPQADFSISPLHGGLD 412
Query: 316 H-NPGSVTPISRDDA 329
N S + R D+
Sbjct: 413 TTNSISASCSQRSDS 427
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 69/230 (30%), Positives = 99/230 (43%)
Query: 111 RTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQ 166
R ++ +E++R + P +F+ R+RL + + VSSI+RVLR +
Sbjct: 107 RKQVATPDVEKKIEEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGK 165
Query: 167 KEQQASAHNQTSETVYDKLRMFNG---QPGWAWYPGSTPTPSPAHLALPHNPG-SVTPIS 222
KE++ + + +G G GS P L L S T +
Sbjct: 166 KEEEEDCDKKEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFT 224
Query: 223 RDDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
+ +E FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A N
Sbjct: 225 AEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-N 278
Query: 279 QTSETVYDKLRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
Q L FN PG + P PT P L P + T IS+D
Sbjct: 279 Q--------LAAFNHLLPG-GFPPTGMPTLPPYQL--PDSTYPTTTISQD 317
Score = 43 (20.2 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSI+RVLR +KE++
Sbjct: 152 VSSISRVLRIKFGKKEEE 169
>ZFIN|ZDB-GENE-990415-15 [details] [associations]
symbol:arxa "aristaless related homeobox a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-15 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
eggNOG:NOG313402 KO:K09452 EMBL:AB006104 IPI:IPI00502004
RefSeq:NP_571459.1 UniGene:Dr.9011 ProteinModelPortal:O42115
SMR:O42115 STRING:O42115 PRIDE:O42115 Ensembl:ENSDART00000080810
GeneID:30657 KEGG:dre:30657 CTD:30657 GeneTree:ENSGT00700000104279
HOGENOM:HOG000012381 HOVERGEN:HBG004285 InParanoid:O42115
OMA:HYLEGGP OrthoDB:EOG43TZW9 NextBio:20807013 ArrayExpress:O42115
Bgee:O42115 Uniprot:O42115
Length = 453
Score = 154 (59.3 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 38/95 (40%), Positives = 56/95 (58%)
Query: 67 SVTPISRDDAKEHESTSDINSEPNS---SADEDSQMXXXXXXXXQRNRTSFTNEQIDSLE 123
S++P +D+ H D+ +S SA DS+ +R RT+FT+ Q++ LE
Sbjct: 176 SLSP--KDEESLHND-GDVKDGEDSVCLSAGSDSE-EGMLKRKQRRYRTTFTSYQLEELE 231
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+ F++THYPDVF RE LA ++ L EAR+QV NR
Sbjct: 232 RAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNR 266
Score = 79 (32.9 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 260 QVWFQNRRAKWRKREK 275
>UNIPROTKB|G3V3P9 [details] [associations]
symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0022037 "metencephalon
development" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042706 "eye photoreceptor cell fate commitment"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048852
"diencephalon morphogenesis" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003022 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01257
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0001708 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0030900 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042472 GO:GO:0030901 GO:GO:0009953 GO:GO:0007492
GO:GO:0090009 EMBL:AL161757 GO:GO:0032525 HGNC:HGNC:8522
GO:GO:0042706 ProteinModelPortal:G3V3P9 SMR:G3V3P9
Ensembl:ENST00000554845 ArrayExpress:G3V3P9 Bgee:G3V3P9
Uniprot:G3V3P9
Length = 239
Score = 173 (66.0 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 47 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 106
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ A + P +P S++
Sbjct: 107 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASIS 166
Query: 220 PIS 222
P+S
Sbjct: 167 PLS 169
Score = 137 (53.3 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 47/153 (30%), Positives = 70/153 (45%)
Query: 183 DKLRMFNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE-FERTHYPDVFAR 240
D L G PG WA P +TP + T D + F +T YPD+F R
Sbjct: 23 DLLHPSVGYPGPWASCPAATPRKQRRERT------TFTRAQLDVLEALFAKTRYPDIFMR 76
Query: 241 ERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYDKLRMFNGQPGWA 298
E +A KI LPE+R+QV NR + Q++QQ N+ ++ R + + G +
Sbjct: 77 EEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTS 136
Query: 299 WY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
P ST P+ A + P +P S++P+S
Sbjct: 137 GQFTPPSSTSVPTIASSSAPVSIWSPASISPLS 169
>UNIPROTKB|F1MC18 [details] [associations]
symbol:ALX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IEA] [GO:0007389
"pattern specification process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
GO:GO:0035115 GO:GO:0048704 GeneTree:ENSGT00700000104013 CTD:257
KO:K09323 OMA:PYSHPHG GO:GO:0007389 EMBL:DAAA02007556
IPI:IPI00714755 RefSeq:NP_001179482.1 UniGene:Bt.61185 PRIDE:F1MC18
Ensembl:ENSBTAT00000027924 GeneID:522085 KEGG:bta:522085
NextBio:20873443 Uniprot:F1MC18
Length = 343
Score = 152 (58.6 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 89 PNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L E
Sbjct: 135 PLSPGLPDSVELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAVRTDLTE 194
Query: 149 ARIQVSSINR 158
AR+QV NR
Sbjct: 195 ARVQVWFQNR 204
Score = 76 (31.8 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ E+
Sbjct: 198 QVWFQNRRAKWRKRER 213
>UNIPROTKB|Q9GLL9 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9823 "Sus scrofa" [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048850 "hypophysis
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 HOVERGEN:HBG053691 KO:K09327
GO:GO:0048850 OMA:TCFPHPY EMBL:AF232676 EMBL:AB187272 EMBL:EF188259
RefSeq:NP_001001263.1 UniGene:Ssc.15921 UniGene:Ssc.86965
ProteinModelPortal:Q9GLL9 SMR:Q9GLL9 Ensembl:ENSSSCT00000028015
GeneID:397280 KEGG:ssc:397280 Uniprot:Q9GLL9
Length = 226
Score = 152 (58.6 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 45/124 (36%), Positives = 58/124 (46%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+F+ Q++ LE F R YPD++ARE LA GL EARIQV NR R A Q+
Sbjct: 70 RRHRTTFSPAQLEQLESAFGRNQYPDIWAREGLARDTGLSEARIQVWFQNR--R--AKQR 125
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 227
+Q+ S + F +P P S PTP P PH P
Sbjct: 126 KQERSLLQPLAHLSPATFSGFLPEPPAC--PYSYPTPPPPMTCFPHPYNHALPSQPSTGG 183
Query: 228 EFER 231
F R
Sbjct: 184 SFAR 187
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 37/114 (32%), Positives = 47/114 (41%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F R YPD++ARE LA GL EARIQV NR R A Q++Q+ S +
Sbjct: 88 FGRNQYPDIWAREGLARDTGLSEARIQVWFQNR--R--AKQRKQERSLLQPLAHLSPATF 143
Query: 289 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWF 342
F +P P S PTP P PH P + + W+
Sbjct: 144 SGFLPEPPAC--PYSYPTPPPPMTCFPHPYNHALPSQPSTGGSFARHPQSEDWY 195
Score = 59 (25.8 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 299 WYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
WYP PTP+ HL P P V P+S + K
Sbjct: 194 WYPTLHPTPT-GHLPCPPAP-PVLPLSLEPPK 223
>UNIPROTKB|Q0P031 [details] [associations]
symbol:vsx1 "Visual system homeobox 1" species:8355
"Xenopus laevis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0060040 "retinal bipolar
neuron differentiation" evidence=IEP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060040 InterPro:IPR023339 PROSITE:PS51496 CTD:30813
HOVERGEN:HBG036251 KO:K09335 EMBL:DQ324366 RefSeq:NP_001090191.1
UniGene:Xl.12402 ProteinModelPortal:Q0P031 SMR:Q0P031 GeneID:779073
KEGG:xla:779073 Xenbase:XB-GENE-866467 Uniprot:Q0P031
Length = 344
Score = 148 (57.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 37/82 (45%), Positives = 44/82 (53%)
Query: 77 KEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFA 136
K E+ SD +S D + +R+RT FT Q+D LEK F HYPDV+A
Sbjct: 121 KHKENISDDDSILGDKNDLKAS-SAQSKRKKRRHRTVFTAHQLDELEKSFNEAHYPDVYA 179
Query: 137 RERLADKIGLPEARIQVSSINR 158
RE LA K LPE RIQV NR
Sbjct: 180 REMLALKTELPEDRIQVWFQNR 201
Score = 79 (32.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 195 QVWFQNRRAKWRKREK 210
>UNIPROTKB|E2RMI2 [details] [associations]
symbol:VSX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060040
"retinal bipolar neuron differentiation" evidence=IEA] [GO:0042551
"neuron maturation" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
InterPro:IPR023339 PROSITE:PS51496 CTD:30813 KO:K09335 OMA:WGSDHLK
EMBL:AAEX03013434 RefSeq:XP_850138.1 ProteinModelPortal:E2RMI2
Ensembl:ENSCAFT00000007019 GeneID:608128 KEGG:cfa:608128
NextBio:20893801 Uniprot:E2RMI2
Length = 363
Score = 148 (57.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 76 AKEHESTSDINSEPNSSADEDSQMXXXXXXXXQ---RNRTSFTNEQIDSLEKEFERTHYP 132
+ + S S + S+ +S +++ S + + R+RT FT Q++ LEK F HYP
Sbjct: 129 SSQKRSESVLTSDEDSPSEDRSGLKASPSSGKRKKRRHRTVFTAHQLEELEKAFSEAHYP 188
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DV+ARE LA K LPE RIQV NR
Sbjct: 189 DVYAREMLAVKTELPEDRIQVWFQNR 214
Score = 79 (32.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 208 QVWFQNRRAKWRKREK 223
>UNIPROTKB|G3V309 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 HGNC:HGNC:37267 HGNC:HGNC:37266
SMR:G3V309 Ensembl:ENST00000554376 Ensembl:ENST00000554416
Uniprot:G3V309
Length = 163
Score = 114 (45.2 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 110 (43.8 bits), Expect = 0.00016, P = 0.00016
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
+R RT+ T Q L + FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 95 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 88 (36.0 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
>UNIPROTKB|Q96QS3 [details] [associations]
symbol:ARX "Homeobox protein ARX" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021759 "globus
pallidus development" evidence=IEA] [GO:0021800 "cerebral cortex
tangential migration" evidence=IEA] [GO:0021831 "embryonic
olfactory bulb interneuron precursor migration" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021853 "cerebral cortex GABAergic interneuron migration"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0046622 "positive regulation of organ growth"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0042127 Orphanet:777 GO:GO:0046622 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG313402 KO:K09452
HOGENOM:HOG000012381 HOVERGEN:HBG004285 EMBL:AY038071
IPI:IPI00045066 RefSeq:NP_620689.1 UniGene:Hs.300304
ProteinModelPortal:Q96QS3 SMR:Q96QS3 STRING:Q96QS3
PhosphoSite:Q96QS3 DMDM:27923733 PaxDb:Q96QS3 PRIDE:Q96QS3
Ensembl:ENST00000379044 GeneID:170302 KEGG:hsa:170302
UCSC:uc004dbp.4 CTD:170302 GeneCards:GC0XM025021 HGNC:HGNC:18060
MIM:300004 MIM:300215 MIM:300382 MIM:300419 MIM:308350 MIM:309510
neXtProt:NX_Q96QS3 Orphanet:1934 Orphanet:2508 Orphanet:94083
Orphanet:3175 Orphanet:3451 Orphanet:452 PharmGKB:PA25024
InParanoid:Q96QS3 OMA:VTHPEER PhylomeDB:Q96QS3 GenomeRNAi:170302
NextBio:88881 Bgee:Q96QS3 CleanEx:HS_ARX Genevestigator:Q96QS3
GermOnline:ENSG00000004848 GO:GO:0021846 GO:GO:0021853
GO:GO:0021800 GO:GO:0021831 GO:GO:0021759 Uniprot:Q96QS3
Length = 562
Score = 152 (58.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 41/146 (28%), Positives = 68/146 (46%)
Query: 16 QKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGSVTPISRDD 75
+ E++ + E + D R +P + G ++P +++
Sbjct: 237 EDEEEELLEDDEEELLEDDARALLKEPRRCPVAATGAVAAAAAAAVATEGGELSP--KEE 294
Query: 76 AKEHESTSDINSEPNS---SADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYP 132
H ++ +S SA DS+ +R RT+FT+ Q++ LE+ F++THYP
Sbjct: 295 LLLHPEDAEGKDGEDSVCLSAGSDSE-EGLLKRKQRRYRTTFTSYQLEELERAFQKTHYP 353
Query: 133 DVFARERLADKIGLPEARIQVSSINR 158
DVF RE LA ++ L EAR+QV NR
Sbjct: 354 DVFTREELAMRLDLTEARVQVWFQNR 379
Score = 79 (32.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 373 QVWFQNRRAKWRKREK 388
>ZFIN|ZDB-GENE-980526-52 [details] [associations]
symbol:pax3a "paired box gene 3a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0048066 "developmental pigmentation"
evidence=IMP] [GO:0050936 "xanthophore differentiation"
evidence=IMP] [GO:0048484 "enteric nervous system development"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-980526-52
GO:GO:0005634 GO:GO:0001755 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048484 GO:GO:0050936
HSSP:P06601 eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
HOGENOM:HOG000230939 EMBL:BX085193 EMBL:AF014366 IPI:IPI00508576
RefSeq:NP_571352.1 UniGene:Dr.75806 SMR:O57416 STRING:O57416
Ensembl:ENSDART00000038828 GeneID:30532 KEGG:dre:30532 CTD:30532
InParanoid:O57416 OMA:EENEPRT NextBio:20806915 Uniprot:O57416
Length = 509
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 53/141 (37%), Positives = 76/141 (53%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D +S + +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA +
Sbjct: 197 DRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQR 256
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P +
Sbjct: 257 AKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LMAFNHLIPG-GFPPSAMS 301
Query: 203 TPSPAHLA-LPHNPGSVTPIS 222
+ P LA P+ P S++ +S
Sbjct: 302 SLQPYQLADSPYPPSSISQVS 322
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 39/101 (38%), Positives = 53/101 (52%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A NQ
Sbjct: 237 RAFERTHYPDIYTREELAQRAKLTEARVQVWFSNR-----RARWRKQAGA-NQ------- 283
Query: 287 KLRMFNGQ-PGWAWYPGSTPTPSPAHLA-LPHNPGSVTPIS 325
L FN PG + P + + P LA P+ P S++ +S
Sbjct: 284 -LMAFNHLIPG-GFPPSAMSSLQPYQLADSPYPPSSISQVS 322
>UNIPROTKB|E9PFV9 [details] [associations]
symbol:PAX7 "Paired box protein Pax-7" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09381
InterPro:IPR022106 Pfam:PF12360 EMBL:AL021528 RefSeq:NP_001128726.1
UniGene:Hs.113253 GeneID:5081 KEGG:hsa:5081 CTD:5081 HGNC:HGNC:8621
GenomeRNAi:5081 NextBio:19602 IPI:IPI00719545
ProteinModelPortal:E9PFV9 SMR:E9PFV9 PRIDE:E9PFV9
Ensembl:ENST00000420770 UCSC:uc010oct.2 ArrayExpress:E9PFV9
Bgee:E9PFV9 Uniprot:E9PFV9
Length = 505
Score = 179 (68.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 69/210 (32%), Positives = 90/210 (42%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 194 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 253
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 254 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 298
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFERT--------HYPDVFARERLADKIGLPEARI 254
T P L P + T IS+D R H + A AD AR
Sbjct: 299 TLPPYQL--PDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAYGARH 356
Query: 255 QVSSINRVLRNLAAQKEQQASAHNQTSETV 284
SS + N AA N S V
Sbjct: 357 SFSSYSDSFMNPAAPSNHMNPVSNGLSPQV 386
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 71/221 (32%), Positives = 99/221 (44%)
Query: 124 KEFERTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+E++R + P +F+ R+RL D+ +P VSSI+RVLR +KE++ A
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSGL--VSSISRVLRIKFGKKEEEDEADK 175
Query: 176 QTSETVYDKLRMFNG---QPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE--- 228
+ + +G G GS P L L S T + + +E
Sbjct: 176 KEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEK 234
Query: 229 -FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 287
FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A NQ
Sbjct: 235 AFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ-------- 280
Query: 288 LRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
L FN PG + P PT P L P + T IS+D
Sbjct: 281 LAAFNHLLPG-GFPPTGMPTLPPYQL--PDSTYPTTTISQD 318
Score = 46 (21.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSE 29
VSSI+RVLR +KE++ A + +
Sbjct: 153 VSSISRVLRIKFGKKEEEDEADKKEDD 179
>UNIPROTKB|P23759 [details] [associations]
symbol:PAX7 "Paired box protein Pax-7" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0014813 "satellite cell commitment" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048706 "embryonic skeletal system development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060415
"muscle tissue morphogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=TAS] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0043066 EMBL:CH471134 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0009653
GO:GO:0021527 GO:GO:0048663 GO:GO:0048706 GO:GO:0021904
GO:GO:0043403 MIM:268220 Orphanet:99756 eggNOG:NOG326044 KO:K09381
GO:GO:0060415 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
HOGENOM:HOG000230939 EMBL:X96743 EMBL:X96744 EMBL:X15042
EMBL:X15250 EMBL:X15251 EMBL:X96745 EMBL:X96746 EMBL:X96747
EMBL:X96748 EMBL:AL021528 EMBL:BC121165 EMBL:BC121166 EMBL:Z35141
IPI:IPI00004431 IPI:IPI00012894 PIR:S78502 RefSeq:NP_001128726.1
RefSeq:NP_002575.1 RefSeq:NP_039236.1 UniGene:Hs.113253
ProteinModelPortal:P23759 SMR:P23759 IntAct:P23759
MINT:MINT-7241806 STRING:P23759 PhosphoSite:P23759 DMDM:8247951
PaxDb:P23759 PRIDE:P23759 Ensembl:ENST00000375375
Ensembl:ENST00000400661 GeneID:5081 KEGG:hsa:5081 UCSC:uc001bay.3
UCSC:uc001baz.3 CTD:5081 GeneCards:GC01P018957 HGNC:HGNC:8621
MIM:167410 neXtProt:NX_P23759 PharmGKB:PA32961 InParanoid:P23759
OMA:NPISASC OrthoDB:EOG4JM7PH PhylomeDB:P23759 GenomeRNAi:5081
NextBio:19602 ArrayExpress:P23759 Bgee:P23759 CleanEx:HS_PAX7
Genevestigator:P23759 GermOnline:ENSG00000009709 GO:GO:0014813
Uniprot:P23759
Length = 520
Score = 179 (68.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 69/210 (32%), Positives = 90/210 (42%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 194 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 253
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 254 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 298
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFERT--------HYPDVFARERLADKIGLPEARI 254
T P L P + T IS+D R H + A AD AR
Sbjct: 299 TLPPYQL--PDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAYGARH 356
Query: 255 QVSSINRVLRNLAAQKEQQASAHNQTSETV 284
SS + N AA N S V
Sbjct: 357 SFSSYSDSFMNPAAPSNHMNPVSNGLSPQV 386
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 71/221 (32%), Positives = 99/221 (44%)
Query: 124 KEFERTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+E++R + P +F+ R+RL D+ +P VSSI+RVLR +KE++ A
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSGL--VSSISRVLRIKFGKKEEEDEADK 175
Query: 176 QTSETVYDKLRMFNG---QPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE--- 228
+ + +G G GS P L L S T + + +E
Sbjct: 176 KEDDGEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEK 234
Query: 229 -FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 287
FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A NQ
Sbjct: 235 AFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ-------- 280
Query: 288 LRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
L FN PG + P PT P L P + T IS+D
Sbjct: 281 LAAFNHLLPG-GFPPTGMPTLPPYQL--PDSTYPTTTISQD 318
Score = 46 (21.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSE 29
VSSI+RVLR +KE++ A + +
Sbjct: 153 VSSISRVLRIKFGKKEEEDEADKKEDD 179
>UNIPROTKB|Q8NFW5 [details] [associations]
symbol:DMBX1 "Diencephalon/mesencephalon homeobox protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007420 "brain
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0048589
"developmental growth" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0007417 "central
nervous system development" evidence=ISS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045892 GO:GO:0007420
EMBL:CH471059 GO:GO:0043565 GO:GO:0008344 GO:GO:0008343
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AF398527 EMBL:AF398528
EMBL:AB037699 EMBL:AL137797 IPI:IPI00219522 IPI:IPI00335270
RefSeq:NP_671725.1 RefSeq:NP_757379.1 UniGene:Hs.375623 HSSP:P06601
ProteinModelPortal:Q8NFW5 SMR:Q8NFW5 STRING:Q8NFW5
PhosphoSite:Q8NFW5 DMDM:74762571 PRIDE:Q8NFW5
Ensembl:ENST00000360032 Ensembl:ENST00000371956 GeneID:127343
KEGG:hsa:127343 UCSC:uc001cpw.3 UCSC:uc001cpx.3 CTD:127343
GeneCards:GC01P046974 HGNC:HGNC:19026 HPA:HPA026811 MIM:607410
neXtProt:NX_Q8NFW5 PharmGKB:PA38780 eggNOG:NOG238265
HOGENOM:HOG000261650 HOVERGEN:HBG061416 InParanoid:Q8NFW5
OMA:PDTQLDT GenomeRNAi:127343 NextBio:82068 Bgee:Q8NFW5
CleanEx:HS_DMBX1 Genevestigator:Q8NFW5 GermOnline:ENSG00000197587
Uniprot:Q8NFW5
Length = 382
Score = 180 (68.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 57/155 (36%), Positives = 78/155 (50%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR------ 161
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 72 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 131
Query: 162 -----NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L QKE + S +E ++ QP PGS P P+ HL+L
Sbjct: 132 SLQKEQLQKQKEAEGSHGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSLSEQSA 188
Query: 217 SVT-PISRDDAKEFERTHYPDVFARERL-ADKIGL 249
S + P + D +E R D A + AD GL
Sbjct: 189 SESAPEDQPDREEDPRAGAEDPKAEKSPGADSKGL 223
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 39/105 (37%), Positives = 49/105 (46%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 88 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 147
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGS 320
+E ++ QP PGS P P+ HL+L S
Sbjct: 148 HGEGKAEAPTPDTQLDTEQP--PRLPGSDP-PAELHLSLSEQSAS 189
>UNIPROTKB|F1NH36 [details] [associations]
symbol:Gga.55791 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AADN02057236 EMBL:AADN02063546
IPI:IPI00822313 Ensembl:ENSGALT00000021906 OMA:MVDDSCL
ArrayExpress:F1NH36 Uniprot:F1NH36
Length = 262
Score = 173 (66.0 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 51/149 (34%), Positives = 75/149 (50%)
Query: 75 DAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDV 134
D E D P ++A+E+ +RNRT+FT Q+ LE+ FE++HYPDV
Sbjct: 43 DLGELRKPGDSEGTPPAAAEEEQPKKKH-----RRNRTTFTTYQLHELERAFEKSHYPDV 97
Query: 135 FARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK-LRMFNGQPG 193
++RE LA K+ LPE R+QV NR + Q++ +AS S ++D + FN P
Sbjct: 98 YSREELAMKVNLPEVRVQVWFQNRRAK-WRRQEKMEAS-----SMKLHDTPMLSFNRPP- 150
Query: 194 WAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
T P +LP +P +PIS
Sbjct: 151 ------MTANVGPMSNSLPLDPWLTSPIS 173
Score = 121 (47.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 36/100 (36%), Positives = 53/100 (53%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + Q++ +AS S ++D
Sbjct: 87 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAK-WRRQEKMEAS-----SMKLHD 140
Query: 287 K-LRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P T P +LP +P +PIS
Sbjct: 141 TPMLSFNRPP-------MTANVGPMSNSLPLDPWLTSPIS 173
>UNIPROTKB|E1BKL5 [details] [associations]
symbol:PAX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060415 "muscle
tissue morphogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048706 "embryonic skeletal system
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0021904 "dorsal/ventral neural tube patterning"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0014813 "satellite cell
commitment" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216 GO:GO:0021527
GO:GO:0048663 GO:GO:0048706 GO:GO:0021904 GO:GO:0043403
GeneTree:ENSGT00680000099553 KO:K09381 GO:GO:0060415
InterPro:IPR022106 Pfam:PF12360 CTD:5081 OMA:NPISASC GO:GO:0014813
EMBL:DAAA02006543 EMBL:DAAA02006544 EMBL:DAAA02006545
EMBL:DAAA02006546 EMBL:DAAA02006547 IPI:IPI00707033
RefSeq:XP_002685784.1 RefSeq:XP_616352.3 Ensembl:ENSBTAT00000019924
GeneID:536229 KEGG:bta:536229 NextBio:20876914 Uniprot:E1BKL5
Length = 505
Score = 177 (67.4 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 69/210 (32%), Positives = 90/210 (42%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 194 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 253
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 254 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 298
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFERT--------HYPDVFARERLADKIGLPEARI 254
T P L P + T IS+D R H + A AD AR
Sbjct: 299 TLPPYQL--PDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAYGARH 356
Query: 255 QVSSINRVLRNLAAQKEQQASAHNQTSETV 284
SS + N AA N S V
Sbjct: 357 GFSSYSDSFMNPAAASNHMNPVSNGLSPQV 386
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 71/221 (32%), Positives = 99/221 (44%)
Query: 124 KEFERTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+E++R + P +F+ R+RL D+ +P VSSI+RVLR +KE++ A
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSGL--VSSISRVLRIKFGKKEEEDEADK 175
Query: 176 QTSETVYDKLRMFNG---QPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE--- 228
+ + +G G GS P L L S T + + +E
Sbjct: 176 KEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEK 234
Query: 229 -FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 287
FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A NQ
Sbjct: 235 AFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ-------- 280
Query: 288 LRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
L FN PG + P PT P L P + T IS+D
Sbjct: 281 LAAFNHLLPG-GFPPTGMPTLPPYQL--PDSTYPTTTISQD 318
Score = 46 (21.3 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSE 29
VSSI+RVLR +KE++ A + +
Sbjct: 153 VSSISRVLRIKFGKKEEEDEADKKEED 179
>UNIPROTKB|O42349 [details] [associations]
symbol:Pax-7 "PAX7 protein" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:0014813 "satellite cell commitment" evidence=ISS]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=ISS]
[GO:0048706 "embryonic skeletal system development" evidence=ISS]
[GO:0007519 "skeletal muscle tissue development" evidence=ISS]
[GO:0021904 "dorsal/ventral neural tube patterning" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051216
GO:GO:0048706 GO:GO:0021904 GO:GO:0043403 HSSP:P06601
GeneTree:ENSGT00680000099553 KO:K09381 HOVERGEN:HBG009115
InterPro:IPR022106 Pfam:PF12360 HOGENOM:HOG000230939 CTD:5081
OMA:NPISASC GO:GO:0014813 EMBL:AADN02040715 EMBL:AADN02040716
EMBL:AADN02040717 EMBL:AADN02040718 EMBL:AADN02040719
EMBL:AADN02040720 EMBL:AADN02040721 EMBL:D87838 IPI:IPI00586304
RefSeq:NP_990396.1 UniGene:Gga.555 SMR:O42349 STRING:O42349
Ensembl:ENSGALT00000006002 GeneID:395942 KEGG:gga:395942
InParanoid:O42349 NextBio:20816007 Uniprot:O42349
Length = 524
Score = 179 (68.1 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 68/206 (33%), Positives = 89/206 (43%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 192 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 251
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 252 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 296
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER-------THYPDVFARERLADKIGLPEARIQ 255
T P L P + T IS+D R T + A AD AR
Sbjct: 297 TLPPYQL--PDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAADSSSAYGARHS 354
Query: 256 VSSINRVLRNLAAQKEQQASAHNQTS 281
SS + N AA N S
Sbjct: 355 FSSYSDSFMNAAAPANHMNPVSNGLS 380
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 68/217 (31%), Positives = 96/217 (44%)
Query: 124 KEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQQASAHNQTSE 179
+E++R + P +F+ R+RL + + VSSI+RVLR +KE++ + +
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEEEEDCDKKEED 177
Query: 180 TVYDKLRMFNG---QPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE----FER 231
+G G GS P L L S T + + +E FER
Sbjct: 178 GEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEKAFER 236
Query: 232 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 291
THYPD++ RE LA + L EAR+QV NR A+ +QA A NQ L F
Sbjct: 237 THYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAF 282
Query: 292 NGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
N PG + P PT P L P + T IS+D
Sbjct: 283 NHLLPG-GFPPTGMPTLPPYQL--PDSTYPTTTISQD 316
Score = 43 (20.2 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSI+RVLR +KE++
Sbjct: 151 VSSISRVLRIKFGKKEEE 168
>UNIPROTKB|P32243 [details] [associations]
symbol:OTX2 "Homeobox protein OTX2" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001708 "cell fate specification" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007492 "endoderm development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0022037 "metencephalon development" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0042706 "eye photoreceptor cell fate commitment" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048852 "diencephalon morphogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0030426
"growth cone" evidence=IDA] [GO:0030900 "forebrain development"
evidence=TAS] [GO:0030901 "midbrain development" evidence=TAS]
[GO:0008589 "regulation of smoothened signaling pathway"
evidence=TAS] [GO:0040036 "regulation of fibroblast growth factor
receptor signaling pathway" evidence=TAS] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IDA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001077 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR001356 InterPro:IPR003022
InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01257 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001708 GO:GO:0005737 GO:GO:0007411
GO:GO:0043234 EMBL:CH471061 GO:GO:0006461 GO:GO:0043565
GO:GO:0030900 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077
GO:GO:0030426 GO:GO:0042472 GO:GO:0030901 GO:GO:0009953
GO:GO:0040019 GO:GO:0007492 GO:GO:0090009 GO:GO:0008589
HOGENOM:HOG000082677 HOVERGEN:HBG004028 GO:GO:0008190 GO:GO:0040036
GO:GO:0032525 GO:GO:2000543 Orphanet:95494 Orphanet:3157
eggNOG:NOG245767 KO:K09326 CTD:5015 OMA:CPVATPR EMBL:AF298117
EMBL:AF093138 EMBL:AK314271 EMBL:BC032579 EMBL:AB037505
IPI:IPI00027683 IPI:IPI00172654 RefSeq:NP_001257452.1
RefSeq:NP_001257453.1 RefSeq:NP_001257454.1 RefSeq:NP_068374.1
RefSeq:NP_758840.1 UniGene:Hs.288655 UniGene:Hs.741558
ProteinModelPortal:P32243 SMR:P32243 IntAct:P32243
MINT:MINT-2861458 STRING:P32243 PhosphoSite:P32243 DMDM:417427
PaxDb:P32243 PRIDE:P32243 DNASU:5015 Ensembl:ENST00000339475
Ensembl:ENST00000408990 Ensembl:ENST00000555006 GeneID:5015
KEGG:hsa:5015 UCSC:uc001xcp.3 GeneCards:GC14M057267 HGNC:HGNC:8522
HPA:HPA000633 MIM:600037 MIM:610125 MIM:613986 neXtProt:NX_P32243
Orphanet:178364 PharmGKB:PA32849 GenomeRNAi:5015 NextBio:19304
ArrayExpress:P32243 Bgee:P32243 CleanEx:HS_OTX2
Genevestigator:P32243 GermOnline:ENSG00000165588 GO:GO:0042706
Uniprot:P32243
Length = 289
Score = 173 (66.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ A + P +P S++
Sbjct: 99 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASIS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 130 (50.8 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
R + + G + P ST P+ A + P +P S++P+S
Sbjct: 117 PAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASISPLS 161
>MGI|MGI:97451 [details] [associations]
symbol:Otx2 "orthodenticle homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISO] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007492 "endoderm development"
evidence=IGI] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IGI;IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0022037 "metencephalon development" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030900 "forebrain development" evidence=IGI;IMP]
[GO:0030901 "midbrain development" evidence=IGI;IMP] [GO:0032525
"somite rostral/caudal axis specification" evidence=IMP]
[GO:0040019 "positive regulation of embryonic development"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IGI]
[GO:0042706 "eye photoreceptor cell fate commitment" evidence=IMP]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0048663 "neuron fate commitment"
evidence=IMP] [GO:0048852 "diencephalon morphogenesis"
evidence=IGI] [GO:0048856 "anatomical structure development"
evidence=IGI] [GO:0090009 "primitive streak formation"
evidence=IMP] [GO:2000543 "positive regulation of gastrulation"
evidence=IMP] InterPro:IPR001356 InterPro:IPR003022
InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01257 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97451 GO:GO:0005634 GO:GO:0001708 GO:GO:0005737
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030901 GO:GO:0009953
GO:GO:0040019 GO:GO:0007492 GO:GO:0090009 HOGENOM:HOG000082677
HOVERGEN:HBG004028 GO:GO:0032525 GO:GO:2000543 eggNOG:NOG245767
GO:GO:0022037 GO:GO:0048852 OrthoDB:EOG4C87T5 GO:GO:0042706
EMBL:X68884 IPI:IPI00311245 PIR:S35346 UniGene:Mm.134516
UniGene:Mm.487292 PDB:2DMS PDBsum:2DMS ProteinModelPortal:P80206
SMR:P80206 MINT:MINT-1347226 STRING:P80206 PhosphoSite:P80206
PRIDE:P80206 ChiTaRS:OTX2 EvolutionaryTrace:P80206 CleanEx:MM_OTX2
Genevestigator:P80206 GermOnline:ENSMUSG00000021848 Uniprot:P80206
Length = 289
Score = 173 (66.0 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 44/123 (35%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ A + P +P S++
Sbjct: 99 QQQNGGQNKVRPAKKKSSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASIS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 130 (50.8 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKSS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
R + + G + P ST P+ A + P +P S++P+S
Sbjct: 117 PAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSPASISPLS 161
>UNIPROTKB|F1NYH7 [details] [associations]
symbol:F1NYH7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 EMBL:AADN02024154 EMBL:AADN02024155
EMBL:AADN02024156 EMBL:AADN02024157 EMBL:AADN02024158
IPI:IPI00587855 Ensembl:ENSGALT00000006292 ArrayExpress:F1NYH7
Uniprot:F1NYH7
Length = 188
Score = 157 (60.3 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 161
+R+RT+FT EQ++ LE+ FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 129 RRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 182
Score = 111 (44.1 bits), Expect = 0.00036, P = 0.00036
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 200 STPTPSPAHLALPHNPG-SVTPISRDDAKE----FERTHYPDVFARERLADKIGLPEARI 254
S P + HL L S T + + +E FERTHYPD++ RE LA + L EAR+
Sbjct: 113 SVPRWASGHLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARV 172
Query: 255 QVSSINRVLR 264
QV NR R
Sbjct: 173 QVWFSNRRAR 182
>UNIPROTKB|F1PNX6 [details] [associations]
symbol:PAX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:NPISASC EMBL:AAEX03001818 EMBL:AAEX03001819 EMBL:AAEX03001820
EMBL:AAEX03001821 EMBL:AAEX03001822 Ensembl:ENSCAFT00000024687
Uniprot:F1PNX6
Length = 505
Score = 175 (66.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 69/210 (32%), Positives = 89/210 (42%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 194 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 253
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 254 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 298
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFERT--------HYPDVFARERLADKIGLPEARI 254
T P L P T IS+D R H + A AD AR
Sbjct: 299 TLPPYQLRDSTYP--TTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAYGARH 356
Query: 255 QVSSINRVLRNLAAQKEQQASAHNQTSETV 284
SS + N AA N S V
Sbjct: 357 SFSSYSDSFMNPAASSNHMNPVSNGLSPQV 386
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 71/221 (32%), Positives = 98/221 (44%)
Query: 124 KEFERTHYPDVFA---RERL-----ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
+E++R + P +F+ R+RL D+ +P VSSI+RVLR +KE++ A
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSGL--VSSISRVLRIKFGKKEEEDEADK 175
Query: 176 QTSETVYDKLRMFNG---QPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE--- 228
+ + +G G GS P L L S T + + +E
Sbjct: 176 KEEDGEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEK 234
Query: 229 -FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDK 287
FERTHYPD++ RE LA + L EAR+QV NR A+ +QA A NQ
Sbjct: 235 AFERTHYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ-------- 280
Query: 288 LRMFNGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
L FN PG + P PT P L P T IS+D
Sbjct: 281 LAAFNHLLPG-GFPPTGMPTLPPYQLRDSTYP--TTTISQD 318
Score = 46 (21.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 3 VSSINRVLRNLAAQKEQQASAHNQTSE 29
VSSI+RVLR +KE++ A + +
Sbjct: 153 VSSISRVLRIKFGKKEEEDEADKKEED 179
>UNIPROTKB|Q91813 [details] [associations]
symbol:otx2-a "Homeobox protein OTX2-A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=IC] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001356 InterPro:IPR003022 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01257
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOVERGEN:HBG004028 EMBL:Z46972
EMBL:BC077357 EMBL:L26509 PIR:I51620 RefSeq:NP_001084160.1
UniGene:Xl.3004 ProteinModelPortal:Q91813 SMR:Q91813 GeneID:399342
KEGG:xla:399342 CTD:399342 Xenbase:XB-GENE-6254039 Uniprot:Q91813
Length = 288
Score = 172 (65.6 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/123 (36%), Positives = 66/123 (53%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ S+ +R + + G + P ST P + P +P SV+
Sbjct: 99 QQQNGGQNKVRPSKKKTSPVREVSSESGTSGQFSPPSSTSVPVISSSTAPVSIWSPASVS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ S+
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPSKKKTS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
+R + + G + P ST P + P +P SV+P+S
Sbjct: 117 PVREVSSESGTSGQFSPPSSTSVPVISSSTAPVSIWSPASVSPLS 161
>ZFIN|ZDB-GENE-990415-237 [details] [associations]
symbol:rx2 "retinal homeobox gene 2" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0060219 "camera-type eye photoreceptor cell differentiation"
evidence=IGI] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-237 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 eggNOG:NOG261733 GO:GO:0060219 HOVERGEN:HBG021349
OrthoDB:EOG4V4387 KO:K09332 EMBL:AF001908 IPI:IPI00483924
RefSeq:NP_571301.1 UniGene:Dr.75762 ProteinModelPortal:O42357
SMR:O42357 STRING:O42357 GeneID:30473 KEGG:dre:30473 CTD:30473
InParanoid:O42357 NextBio:20806866 ArrayExpress:O42357
Uniprot:O42357
Length = 327
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 51/150 (34%), Positives = 73/150 (48%)
Query: 75 DAKEHESTSDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYP 132
DA + S++ S+ S DED +RNRT+FT Q+ LE+ FE++HYP
Sbjct: 106 DADLGDPRSNVESDSRSPDIPDEDQPKKKH-----RRNRTTFTTYQLHELERAFEKSHYP 160
Query: 133 DVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQP 192
DV++RE LA K+ LPE R+QV NR A+ +Q T + +R FN P
Sbjct: 161 DVYSREELAMKVNLPEVRVQVWFQNR-----RAKWRRQEKMDTGTMKLHDSPIRSFNRPP 215
Query: 193 GWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
P P +LP +P +P+S
Sbjct: 216 -------MAPNVGPMSNSLPLDPWLSSPLS 238
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 54/189 (28%), Positives = 79/189 (41%)
Query: 142 DKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS- 200
D+ L E QV++ + Q +QQ S ++ T DK G P S
Sbjct: 62 DEDQLEEQEKQVNADPYSHLQIPDQTQQQQSVYHDTGLFSTDKCDADLGDPRSNVESDSR 121
Query: 201 TPT-PSPAHLALPH--NPGSVTPISRDDAKE-FERTHYPDVFARERLADKIGLPEARIQV 256
+P P H N + T + + FE++HYPDV++RE LA K+ LPE R+QV
Sbjct: 122 SPDIPDEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 181
Query: 257 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPH 316
NR A+ +Q T + +R FN P P P +LP
Sbjct: 182 WFQNR-----RAKWRRQEKMDTGTMKLHDSPIRSFNRPP-------MAPNVGPMSNSLPL 229
Query: 317 NPGSVTPIS 325
+P +P+S
Sbjct: 230 DPWLSSPLS 238
>UNIPROTKB|H0YIZ3 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 EMBL:AL590369 HGNC:HGNC:21338
ChiTaRS:PRRX2 Ensembl:ENST00000557730 Uniprot:H0YIZ3
Length = 166
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 44/119 (36%), Positives = 61/119 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 20 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNER 79
Query: 168 EQQASAHNQTSETVYDKLRMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVTP 220
AS ++ Y + QP A P S SP P++PGS P
Sbjct: 80 AMLASRSASLLKS-YSQEAAIE-QPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGP 136
Score = 109 (43.4 bits), Expect = 0.00029, P = 0.00029
Identities = 36/101 (35%), Positives = 47/101 (46%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
FERTHYPD F RE LA ++ L EAR+QV NR + ++ AS ++ Y +
Sbjct: 38 FERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLASRSASLLKS-YSQE 96
Query: 289 RMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVTP 323
QP A P S SP P++PGS P
Sbjct: 97 AAIE-QPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGP 136
>UNIPROTKB|F2Z538 [details] [associations]
symbol:F2Z538 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104279 EMBL:CU137739
Ensembl:ENSSSCT00000006878 OMA:QSSRVWY Uniprot:F2Z538
Length = 145
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 40/102 (39%), Positives = 60/102 (58%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRV-LRNLAAQ 166
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+Q SS RV +N A+
Sbjct: 17 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQQSS--RVWYQNRRAK 74
Query: 167 --KEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
+ ++A N+ + L+ ++G P P P+P
Sbjct: 75 FRRNERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 111
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 32/84 (38%), Positives = 46/84 (54%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRV-LRNLAAQ--KEQQASAHNQTSETVY 285
FERTHYPD F RE LA ++ L EAR+Q SS RV +N A+ + ++A N+ +
Sbjct: 35 FERTHYPDAFVREDLARRVNLTEARVQQSS--RVWYQNRRAKFRRNERAMLANKNASL-- 90
Query: 286 DKLRMFNGQPGWAWYPGSTPTPSP 309
L+ ++G P P P+P
Sbjct: 91 --LKSYSGDVTAVEQP-IVPRPAP 111
>FB|FBgn0020617 [details] [associations]
symbol:Rx "Retinal Homeobox" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0007420
"brain development" evidence=NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG261733
GeneTree:ENSGT00700000104256 EMBL:AJ223300 EMBL:AY118390
RefSeq:NP_726006.2 UniGene:Dm.3064 ProteinModelPortal:Q9W2Q1
SMR:Q9W2Q1 STRING:Q9W2Q1 EnsemblMetazoa:FBtr0071518 GeneID:37367
KEGG:dme:Dmel_CG10052 CTD:37367 FlyBase:FBgn0020617
InParanoid:Q9W2Q1 OMA:MVEANQL OrthoDB:EOG43BK55 PhylomeDB:Q9W2Q1
GenomeRNAi:37367 NextBio:803298 Bgee:Q9W2Q1 GermOnline:CG10052
Uniprot:Q9W2Q1
Length = 873
Score = 181 (68.8 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 64/212 (30%), Positives = 94/212 (44%)
Query: 16 QKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGSVTPISRDD 75
Q++QQ Q +D NG P G GS S +D
Sbjct: 441 QQQQQQQQLQQQQGFQHDFRNSGNGNPNGNSNSGD-HGERLNADSDSLVNGSCA--SSED 497
Query: 76 AKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVF 135
+ S S+ + S +D++ Q +RNRT+FT Q+ LE+ FE++HYPDV+
Sbjct: 498 LNQTNS-SEQGEKITSGSDDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVY 556
Query: 136 ARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL--RMFNGQPG 193
+RE LA K+ LPE R+QV NR R A + Q+ S + T + +L R+ G G
Sbjct: 557 SREELAMKVNLPEVRVQVWFQNR--R--AKWRRQEKSESLRLGLTHFTQLPHRLGCGASG 612
Query: 194 WAWYPGSTP---TPSPAHLALPHN--PGSVTP 220
P +P + P L+ P P +TP
Sbjct: 613 LPVDPWLSPPLLSALPGFLSHPQTVYPSYLTP 644
Score = 45 (20.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 202 PTPSPAHLALPHNPGS--VTPIS 222
P P P H +PH GS V P+S
Sbjct: 686 PPPPPPH-GVPHPHGSHHVVPLS 707
Score = 45 (20.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 305 PTPSPAHLALPHNPGS--VTPIS 325
P P P H +PH GS V P+S
Sbjct: 686 PPPPPPH-GVPHPHGSHHVVPLS 707
Score = 40 (19.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 302 GSTPTPSPAHLALPHNPGSVT 322
G TP +P H +LP + + T
Sbjct: 729 GVTPLGTPLHSSLPPSSTATT 749
>ZFIN|ZDB-GENE-990415-238 [details] [associations]
symbol:rx3 "retinal homeobox gene 3" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0030900
"forebrain development" evidence=IMP] [GO:0001654 "eye development"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-990415-238 GO:GO:0005634 GO:GO:0001708 GO:GO:0001755
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0021984 eggNOG:NOG261733
GO:GO:0048596 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 KO:K09332
EMBL:AF001909 IPI:IPI00493738 RefSeq:NP_571302.1 UniGene:Dr.540
ProteinModelPortal:O42358 SMR:O42358 STRING:O42358 GeneID:30474
KEGG:dre:30474 CTD:30474 InParanoid:O42358 NextBio:20806867
ArrayExpress:O42358 Uniprot:O42358
Length = 292
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 45/121 (37%), Positives = 63/121 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 107 RRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEK 166
Query: 168 EQQASAHNQTSETVY----DKLRMFNGQPGWAWYPGSTPTPSPAHLALPH--NPGSVTPI 221
+ +S Q S + L + +G P W G T S +LP P P
Sbjct: 167 LEVSSIKLQESSMLSIPRSGPLSLGSGLPLEPWLTGPISTSSSPLQSLPSFITPQQAVPA 226
Query: 222 S 222
S
Sbjct: 227 S 227
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/105 (34%), Positives = 51/105 (48%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVY- 285
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S +
Sbjct: 123 RAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSIKLQESSMLSI 182
Query: 286 ---DKLRMFNGQPGWAWYPGSTPTPSPAHLALPH--NPGSVTPIS 325
L + +G P W G T S +LP P P S
Sbjct: 183 PRSGPLSLGSGLPLEPWLTGPISTSSSPLQSLPSFITPQQAVPAS 227
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 17 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNR 67
Score = 108 (43.1 bits), Expect = 0.00037, P = 0.00037
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 35 FERTHYPDAFVREELARRVNLSEARVQVWFQNR 67
>UNIPROTKB|Q90963 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 EMBL:X79695
IPI:IPI00579776 PIR:S49440 UniGene:Gga.53985
ProteinModelPortal:Q90963 SMR:Q90963 STRING:Q90963 eggNOG:NOG309174
InParanoid:Q90963 Uniprot:Q90963
Length = 165
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 17 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNR 67
Score = 108 (43.1 bits), Expect = 0.00037, P = 0.00037
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 35 FERTHYPDAFVREELARRVNLSEARVQVWFQNR 67
>UNIPROTKB|E1BF87 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0042474 "middle ear
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 OMA:GVSMANS EMBL:DAAA02032213 EMBL:DAAA02032214
EMBL:DAAA02032215 IPI:IPI00713783 Ensembl:ENSBTAT00000003817
Uniprot:E1BF87
Length = 166
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 18 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNR 68
Score = 108 (43.1 bits), Expect = 0.00039, P = 0.00039
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 36 FERTHYPDAFVREELARRVNLSEARVQVWFQNR 68
>UNIPROTKB|F1RSD4 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
EMBL:CU138499 Ensembl:ENSSSCT00000006879 Uniprot:F1RSD4
Length = 141
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 17 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 73
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 74 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 107
Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
FERTHYPD F RE LA ++ L EAR+QV NR + ++ ++A N+ + L
Sbjct: 35 FERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRRNERAMLANKNASL----L 87
Query: 289 RMFNGQPGWAWYPGSTPTPSP 309
+ ++G P P P+P
Sbjct: 88 KSYSGDVTAVEQP-IVPRPAP 107
>UNIPROTKB|G3V2N3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:Z97200 HGNC:HGNC:9142 ChiTaRS:PRRX1
ProteinModelPortal:G3V2N3 SMR:G3V2N3 Ensembl:ENST00000497230
ArrayExpress:G3V2N3 Bgee:G3V2N3 Uniprot:G3V2N3
Length = 200
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>UNIPROTKB|F1RQG1 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:GVSMANS EMBL:CU915659 Ensembl:ENSSSCT00000006245 Uniprot:F1RQG1
Length = 211
Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 63 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNR 113
>ZFIN|ZDB-GENE-990415-201 [details] [associations]
symbol:pax7a "paired box gene 7a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0048066 "developmental pigmentation"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389
ZFIN:ZDB-GENE-990415-201 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048066 HSSP:P06601
HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360 EMBL:AF014368
EMBL:BC163502 EMBL:BC163523 EMBL:BX957335 IPI:IPI00510646
RefSeq:NP_571400.1 UniGene:Dr.150230 UniGene:Dr.75807 SMR:O57418
GeneID:30587 KEGG:dre:30587 CTD:30587 InParanoid:O57418
NextBio:20806957 Uniprot:O57418
Length = 507
Score = 181 (68.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 79/253 (31%), Positives = 107/253 (42%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 197 DKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 256
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 257 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 301
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFERTHY--PDVFARERL-ADK---IGLPEARIQV 256
T P + LP + T +S+D + R P + L AD GL R
Sbjct: 302 T-LPTY-QLPESTYPSTTLSQDGSSTLHRPQPLPPSSMHQGGLSADSGSAYGLSSNRHTF 359
Query: 257 SSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALP- 315
SS + + A N S V L + P + S SP H L
Sbjct: 360 SSYSETFMSPTASSNHMNPVSNGLSPQVMSILSNPSAVPSQPQHDFSI---SPLHGGLEA 416
Query: 316 HNPGSVTPISRDD 328
NP S + R D
Sbjct: 417 SNPISASCSQRSD 429
Score = 126 (49.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 64/210 (30%), Positives = 91/210 (43%)
Query: 133 DVFARERLADKIGLPEARIQ-VSSINRVLRNLAAQKEQ--QASAHNQTSET-VYDKLRMF 188
D ++ + D+ +P VSSI+RVLR +K+ + ++ E +
Sbjct: 135 DKLLKDGVCDRGTVPSGEASSVSSISRVLRARFGKKDDDDECDKKDEDGEKKTKHSIDGI 194
Query: 189 NGQPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE----FERTHYPDVFARERL 243
G G GS P L L S T + + +E FERTHYPD++ RE L
Sbjct: 195 LGDKGNRTDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREEL 253
Query: 244 ADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPG 302
A + L EAR+QV NR A+ +QA A NQ L FN PG + P
Sbjct: 254 AQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPT 298
Query: 303 STPTPSPAHLALPHNPGSVTPISRDDAKGL 332
PT P + LP + T +S+D + L
Sbjct: 299 GMPT-LPTY-QLPESTYPSTTLSQDGSSTL 326
Score = 37 (18.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 3 VSSINRVLRNLAAQKE 18
VSSI+RVLR +K+
Sbjct: 156 VSSISRVLRARFGKKD 171
>UNIPROTKB|E1BNP1 [details] [associations]
symbol:OTX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042706 "eye photoreceptor cell fate commitment" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0032525
"somite rostral/caudal axis specification" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0030426
"growth cone" evidence=IEA] [GO:0022037 "metencephalon development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003022 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01257
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0001708 GO:GO:0005737 GO:GO:0007411 GO:GO:0045893
GO:GO:0043234 GO:GO:0006461 GO:GO:0043565 GO:GO:0030900
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030426
GO:GO:0042472 GO:GO:0030901 GO:GO:0009953 GO:GO:0040019
GO:GO:0007492 GO:GO:0090009 GeneTree:ENSGT00700000104128
GO:GO:0032525 GO:GO:2000543 KO:K09326 CTD:5015 OMA:CPVATPR
GO:GO:0042706 EMBL:DAAA02029239 IPI:IPI00903579
RefSeq:NP_001180130.1 UniGene:Bt.87811 Ensembl:ENSBTAT00000019616
GeneID:538953 KEGG:bta:538953 NextBio:20877686 Uniprot:E1BNP1
Length = 289
Score = 170 (64.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ + + P +P S++
Sbjct: 99 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPAISSSSAPVSIWSPASIS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
R + + G + P ST P+ + + P +P S++P+S
Sbjct: 117 PAREVSSESGTSGQFTPPSSTSVPAISSSSAPVSIWSPASISPLS 161
>UNIPROTKB|F1SSM3 [details] [associations]
symbol:OTX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090009 "primitive
streak formation" evidence=IEA] [GO:0048852 "diencephalon
morphogenesis" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0042706 "eye photoreceptor cell fate
commitment" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0022037
"metencephalon development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007492
"endoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0001708 "cell fate
specification" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR003022
InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PRINTS:PR01257 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0001708 GO:GO:0005737 GO:GO:0007411
GO:GO:0043234 GO:GO:0006461 GO:GO:0043565 GO:GO:0030900
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030426
GO:GO:0042472 GO:GO:0030901 GO:GO:0009953 GO:GO:0007492
GO:GO:0090009 GeneTree:ENSGT00700000104128 GO:GO:0032525 KO:K09326
OMA:CPVATPR GO:GO:0042706 EMBL:CU463093 RefSeq:XP_003353539.1
Ensembl:ENSSSCT00000005580 GeneID:100512643 KEGG:ssc:100512643
Uniprot:F1SSM3
Length = 289
Score = 170 (64.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ + + P +P S++
Sbjct: 99 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPAISSSSAPVSIWSPASIS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
R + + G + P ST P+ + + P +P S++P+S
Sbjct: 117 PAREVSSESGTSGQFTPPSSTSVPAISSSSAPVSIWSPASISPLS 161
>UNIPROTKB|F1MTX0 [details] [associations]
symbol:PAX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060594 "mammary
gland specification" evidence=IEA] [GO:0048663 "neuron fate
commitment" evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 GO:GO:0005634 GO:GO:0007507 GO:GO:0008284
GO:GO:0008283 GO:GO:0001755 GO:GO:0043565 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003705 GO:GO:0000122 GO:GO:0007517 GO:GO:0001843
GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
GeneTree:ENSGT00680000099553 KO:K09381 InterPro:IPR022106
Pfam:PF12360 CTD:5077 OMA:VHQSTLP EMBL:DAAA02006005 IPI:IPI01001137
RefSeq:NP_001193747.1 UniGene:Bt.112037 Ensembl:ENSBTAT00000013131
GeneID:540951 KEGG:bta:540951 NextBio:20878929 Uniprot:F1MTX0
Length = 484
Score = 166 (63.5 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 83 SDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ S P S +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE L
Sbjct: 193 SERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 252
Query: 141 ADKIGLPEARIQVSSINRVLR 161
A + L EAR+QV NR R
Sbjct: 253 AQRAKLTEARVQVWFSNRRAR 273
Score = 120 (47.3 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLA-DKIGLPEARIQVSSINRVLRNLAAQ-KEQ 169
T ++ +E++R + P +F+ R++L D + VSSI+R+LR+ + +E+
Sbjct: 110 TTPDVEKKIEEYKREN-PGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE 168
Query: 170 QASAHNQTSETVYDKLR-MFNG-QPGWAWYPGS---TPTPSPAHLALPHNPG-SVTPISR 223
+A + +E K + +G A P S + S L L S T +
Sbjct: 169 EADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTA 228
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ +E FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 72 (30.4 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 339 QVWFSNRRAKWRRE 352
QVWFSNRRA+WR++
Sbjct: 264 QVWFSNRRARWRKQ 277
Score = 46 (21.3 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCLQQAARE 430
GGF P++M + SY P+ + QA +
Sbjct: 292 GGFPPTAMPTLPTYQLSETSYQPTAIPQAVSD 323
Score = 42 (19.8 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 3 VSSINRVLRNLAAQ-KEQQASAHNQTSE 29
VSSI+R+LR+ + +E++A + +E
Sbjct: 151 VSSISRILRSKFGKGEEEEADLERKEAE 178
>UNIPROTKB|E2QX72 [details] [associations]
symbol:PAX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:VHQSTLP EMBL:AAEX03018179 EMBL:AAEX03018180 EMBL:AAEX03018181
Ensembl:ENSCAFT00000025445 Uniprot:E2QX72
Length = 485
Score = 166 (63.5 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 83 SDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ S P S +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE L
Sbjct: 194 SERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 253
Query: 141 ADKIGLPEARIQVSSINRVLR 161
A + L EAR+QV NR R
Sbjct: 254 AQRAKLTEARVQVWFSNRRAR 274
Score = 120 (47.3 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLA-DKIGLPEARIQVSSINRVLRNLAAQ-KEQ 169
T ++ +E++R + P +F+ R++L D + VSSI+R+LR+ + +E+
Sbjct: 111 TTPDVEKKIEEYKREN-PGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE 169
Query: 170 QASAHNQTSETVYDKLR-MFNG-QPGWAWYPGS---TPTPSPAHLALPHNPG-SVTPISR 223
+A + +E K + +G A P S + S L L S T +
Sbjct: 170 EADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTA 229
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ +E FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 230 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 274
Score = 72 (30.4 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 339 QVWFSNRRAKWRRE 352
QVWFSNRRA+WR++
Sbjct: 265 QVWFSNRRARWRKQ 278
Score = 46 (21.3 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCLQQAARE 430
GGF P++M + SY P+ + QA +
Sbjct: 293 GGFPPTAMPTLPTYQLSETSYQPTAIPQAVSD 324
Score = 42 (19.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 3 VSSINRVLRNLAAQ-KEQQASAHNQTSE 29
VSSI+R+LR+ + +E++A + +E
Sbjct: 152 VSSISRILRSKFGKGEEEEADLERKEAE 179
>UNIPROTKB|E2RBA9 [details] [associations]
symbol:OTX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042706 "eye photoreceptor cell fate commitment" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0032525
"somite rostral/caudal axis specification" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0030426
"growth cone" evidence=IEA] [GO:0022037 "metencephalon development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003022 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01257
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0001708 GO:GO:0005737 GO:GO:0007411 GO:GO:0045893
GO:GO:0043234 GO:GO:0006461 GO:GO:0043565 GO:GO:0030900
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030426
GO:GO:0042472 GO:GO:0030901 GO:GO:0009953 GO:GO:0040019
GO:GO:0007492 GO:GO:0090009 GeneTree:ENSGT00700000104128
GO:GO:0032525 GO:GO:2000543 KO:K09326 CTD:5015 OMA:CPVATPR
GO:GO:0042706 EMBL:AAEX03005750 RefSeq:XP_003435187.1
ProteinModelPortal:E2RBA9 Ensembl:ENSCAFT00000024153 GeneID:490708
KEGG:cfa:490708 NextBio:20863674 Uniprot:E2RBA9
Length = 297
Score = 170 (64.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 47 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 106
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ + + P +P S++
Sbjct: 107 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPAISSSSAPVSIWSPASIS 166
Query: 220 PIS 222
P+S
Sbjct: 167 PLS 169
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 183 DKLRMFNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE-FERTHYPDVFAR 240
D L G PG WA P +TP + T D + F +T YPD+F R
Sbjct: 23 DLLHPSVGYPGPWASCPAATPRKQRRERT------TFTRAQLDVLEALFAKTRYPDIFMR 76
Query: 241 ERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYDKLRMFNGQPGWA 298
E +A KI LPE+R+QV NR + Q++QQ N+ ++ R + + G +
Sbjct: 77 EEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTS 136
Query: 299 WY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
P ST P+ + + P +P S++P+S
Sbjct: 137 GQFTPPSSTSVPAISSSSAPVSIWSPASISPLS 169
>UNIPROTKB|D2GVQ2 [details] [associations]
symbol:OTX2 "Uncharacterized protein" species:9646
"Ailuropoda melanoleuca" [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS]
InterPro:IPR001356 InterPro:IPR003022 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PRINTS:PR01257
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0001708 GO:GO:0005737 GO:GO:0007411 GO:GO:0045893
GO:GO:0043234 GO:GO:0006461 GO:GO:0043565 GO:GO:0030900
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0001077 GO:GO:0030426
GO:GO:0042472 GO:GO:0030901 GO:GO:0009953 GO:GO:0040019
GO:GO:0007492 GO:GO:0090009 GeneTree:ENSGT00700000104128
HOGENOM:HOG000082677 GO:GO:0032525 GO:GO:2000543 KO:K09326
OMA:CPVATPR OrthoDB:EOG4C87T5 GO:GO:0042706 EMBL:ACTA01169224
EMBL:ACTA01177222 EMBL:GL192352 RefSeq:XP_002913054.1
ProteinModelPortal:D2GVQ2 Ensembl:ENSAMET00000002543
GeneID:100467291 KEGG:aml:100467291 Uniprot:D2GVQ2
Length = 297
Score = 170 (64.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 43/123 (34%), Positives = 67/123 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 47 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 106
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ + + P +P S++
Sbjct: 107 QQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPAISSSSAPVSIWSPASIS 166
Query: 220 PIS 222
P+S
Sbjct: 167 PLS 169
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 183 DKLRMFNGQPG-WAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKE-FERTHYPDVFAR 240
D L G PG WA P +TP + T D + F +T YPD+F R
Sbjct: 23 DLLHPSVGYPGPWASCPAATPRKQRRERT------TFTRAQLDVLEALFAKTRYPDIFMR 76
Query: 241 ERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYDKLRMFNGQPGWA 298
E +A KI LPE+R+QV NR + Q++QQ N+ ++ R + + G +
Sbjct: 77 EEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTS 136
Query: 299 WY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
P ST P+ + + P +P S++P+S
Sbjct: 137 GQFTPPSSTSVPAISSSSAPVSIWSPASISPLS 169
>UNIPROTKB|Q7YRX0 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
GeneTree:ENSGT00700000104256 HOVERGEN:HBG021349 EMBL:AY211276
IPI:IPI00706984 RefSeq:NP_872594.1 UniGene:Bt.87576
ProteinModelPortal:Q7YRX0 SMR:Q7YRX0 STRING:Q7YRX0
Ensembl:ENSBTAT00000012858 GeneID:359713 KEGG:bta:359713 CTD:84839
eggNOG:NOG248147 InParanoid:Q7YRX0 KO:K09333 OMA:SFGPHAF
OrthoDB:EOG4V4387 NextBio:20812744 Uniprot:Q7YRX0
Length = 184
Score = 153 (58.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT Q+ LE+ FE +HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 28 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNR 78
>UNIPROTKB|E2R5X4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
CTD:84839 KO:K09333 OMA:SFGPHAF EMBL:AAEX03012573
RefSeq:XP_854816.1 Ensembl:ENSCAFT00000030462 GeneID:612000
KEGG:cfa:612000 NextBio:20897534 Uniprot:E2R5X4
Length = 184
Score = 153 (58.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT Q+ LE+ FE +HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 28 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNR 78
>UNIPROTKB|Q96IS3 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox
protein 2" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007601 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Orphanet:1872 GO:GO:0050896
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518 HSSP:P06601
EMBL:AC005777 HOVERGEN:HBG021349 CTD:84839 eggNOG:NOG248147
KO:K09333 OrthoDB:EOG4V4387 EMBL:AY211277 EMBL:BC007284
EMBL:BC018709 EMBL:BC032512 IPI:IPI00063781 RefSeq:NP_116142.1
UniGene:Hs.532691 ProteinModelPortal:Q96IS3 SMR:Q96IS3
STRING:Q96IS3 DMDM:74760880 PRIDE:Q96IS3 Ensembl:ENST00000395106
GeneID:84839 KEGG:hsa:84839 UCSC:uc002lyr.3 GeneCards:GC19M003769
HGNC:HGNC:18286 MIM:610362 MIM:610381 MIM:613757 neXtProt:NX_Q96IS3
PharmGKB:PA162400734 InParanoid:Q96IS3 PhylomeDB:Q96IS3
GenomeRNAi:84839 NextBio:75065 ArrayExpress:Q96IS3 Bgee:Q96IS3
CleanEx:HS_RAX2 Genevestigator:Q96IS3 Uniprot:Q96IS3
Length = 184
Score = 153 (58.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT Q+ LE+ FE +HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 28 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNR 78
>UNIPROTKB|F1S7P4 [details] [associations]
symbol:RAX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:SFGPHAF EMBL:FP102497 Ensembl:ENSSSCT00000014739 Uniprot:F1S7P4
Length = 184
Score = 153 (58.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT Q+ LE+ FE +HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 28 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNR 78
>UNIPROTKB|P23760 [details] [associations]
symbol:PAX3 "Paired box protein Pax-3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007605 "sensory perception of sound"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0006915 GO:GO:0007507 GO:GO:0008284 GO:GO:0008283
EMBL:CH471063 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
GO:GO:0009887 GO:GO:0006366 GO:GO:0007517 GO:GO:0007605
GO:GO:0001843 GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 MIM:268220
Orphanet:99756 GO:GO:0060594 eggNOG:NOG326044 KO:K09381
EMBL:AY633656 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
EMBL:AY251279 EMBL:AY251280 EMBL:AK291278 EMBL:AC010980
EMBL:AC012591 EMBL:BC063547 EMBL:BC101299 EMBL:BC101300
EMBL:BC101301 EMBL:BC101302 EMBL:BC114363 EMBL:U12263 EMBL:U12259
EMBL:U12258 EMBL:U12260 EMBL:U12262 EMBL:X15043 EMBL:X15252
EMBL:X15253 EMBL:Z29972 EMBL:Z29973 EMBL:Z29974 EMBL:S69369
EMBL:S69370 EMBL:S83614 EMBL:L10614 IPI:IPI00012896 IPI:IPI00219092
IPI:IPI00219093 IPI:IPI00375387 IPI:IPI00895878 PIR:I54276
PIR:I68547 PIR:S06960 RefSeq:NP_000429.2 RefSeq:NP_001120838.1
RefSeq:NP_039230.1 RefSeq:NP_852122.1 RefSeq:NP_852123.1
RefSeq:NP_852124.1 RefSeq:NP_852125.1 RefSeq:NP_852126.1
UniGene:Hs.42146 PDB:3CMY PDBsum:3CMY ProteinModelPortal:P23760
SMR:P23760 IntAct:P23760 MINT:MINT-202884 STRING:P23760
PhosphoSite:P23760 DMDM:1172022 PRIDE:P23760 DNASU:5077
Ensembl:ENST00000258387 Ensembl:ENST00000336840
Ensembl:ENST00000344493 Ensembl:ENST00000350526
Ensembl:ENST00000392069 Ensembl:ENST00000392070
Ensembl:ENST00000409551 Ensembl:ENST00000409828 GeneID:5077
KEGG:hsa:5077 UCSC:uc002vmw.2 UCSC:uc002vmz.2 UCSC:uc002vna.2
CTD:5077 GeneCards:GC02M223064 HGNC:HGNC:8617 HPA:CAB013466
MIM:122880 MIM:148820 MIM:193500 MIM:606597 neXtProt:NX_P23760
Orphanet:1529 Orphanet:894 Orphanet:896 PharmGKB:PA32957
HOGENOM:HOG000230939 OMA:VHQSTLP ChiTaRS:PAX3
EvolutionaryTrace:P23760 GenomeRNAi:5077 NextBio:19572
ArrayExpress:P23760 Bgee:P23760 CleanEx:HS_PAX3
Genevestigator:P23760 GermOnline:ENSG00000135903 Uniprot:P23760
Length = 479
Score = 166 (63.5 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 83 SDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ S P S +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE L
Sbjct: 193 SERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 252
Query: 141 ADKIGLPEARIQVSSINRVLR 161
A + L EAR+QV NR R
Sbjct: 253 AQRAKLTEARVQVWFSNRRAR 273
Score = 120 (47.3 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLA-DKIGLPEARIQVSSINRVLRNLAAQ-KEQ 169
T ++ +E++R + P +F+ R++L D + VSSI+R+LR+ + +E+
Sbjct: 110 TTPDVEKKIEEYKREN-PGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE 168
Query: 170 QASAHNQTSETVYDKLR-MFNG-QPGWAWYPGS---TPTPSPAHLALPHNPG-SVTPISR 223
+A + +E K + +G A P S + S L L S T +
Sbjct: 169 EADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTA 228
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ +E FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 72 (30.4 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 339 QVWFSNRRAKWRRE 352
QVWFSNRRA+WR++
Sbjct: 264 QVWFSNRRARWRKQ 277
Score = 45 (20.9 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCLQQAARE 430
GGF P++M + SY P+ + QA +
Sbjct: 292 GGFPPTAMPTLPTYQLSETSYQPTSIPQAVSD 323
Score = 42 (19.8 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 3 VSSINRVLRNLAAQ-KEQQASAHNQTSE 29
VSSI+R+LR+ + +E++A + +E
Sbjct: 151 VSSISRILRSKFGKGEEEEADLERKEAE 178
>MGI|MGI:97487 [details] [associations]
symbol:Pax3 "paired box gene 3" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0001755 "neural crest
cell migration" evidence=IMP] [GO:0001843 "neural tube closure"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0021915
"neural tube development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0048066
"developmental pigmentation" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IGI] [GO:0060594 "mammary gland specification"
evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97487
GO:GO:0008284 GO:GO:0008283 GO:GO:0001755 GO:GO:0043565
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0055007 GO:GO:0001843 GO:GO:0035914
GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360 CTD:5077
HOGENOM:HOG000230939 ChiTaRS:PAX3 EMBL:X59358 EMBL:AK014337
EMBL:AK045018 EMBL:AK148354 EMBL:S66429 EMBL:S66433 IPI:IPI00625217
PIR:S15031 RefSeq:NP_001152992.1 RefSeq:NP_032807.3 UniGene:Mm.1371
ProteinModelPortal:P24610 SMR:P24610 IntAct:P24610
MINT:MINT-4653013 STRING:P24610 PhosphoSite:P24610 PRIDE:P24610
Ensembl:ENSMUST00000087086 GeneID:18505 KEGG:mmu:18505
UCSC:uc007bqb.2 NextBio:294224 Bgee:P24610 CleanEx:MM_PAX3
Genevestigator:P24610 GermOnline:ENSMUSG00000004872 Uniprot:P24610
Length = 479
Score = 166 (63.5 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 83 SDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ S P S +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE L
Sbjct: 193 SERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 252
Query: 141 ADKIGLPEARIQVSSINRVLR 161
A + L EAR+QV NR R
Sbjct: 253 AQRAKLTEARVQVWFSNRRAR 273
Score = 120 (47.3 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLA-DKIGLPEARIQVSSINRVLRNLAAQ-KEQ 169
T ++ +E++R + P +F+ R++L D + VSSI+R+LR+ + +E+
Sbjct: 110 TTPDVEKKIEEYKREN-PGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE 168
Query: 170 QASAHNQTSETVYDKLR-MFNG-QPGWAWYPGS---TPTPSPAHLALPHNPG-SVTPISR 223
+A + +E K + +G A P S + S L L S T +
Sbjct: 169 EADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTA 228
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ +E FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 229 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 273
Score = 72 (30.4 bits), Expect = 5.0e-08, Sum P(3) = 5.0e-08
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 339 QVWFSNRRAKWRRE 352
QVWFSNRRA+WR++
Sbjct: 264 QVWFSNRRARWRKQ 277
Score = 45 (20.9 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCLQQAARE 430
GGF P++M + SY P+ + QA +
Sbjct: 292 GGFPPTAMPTLPTYQLSETSYQPTSIPQAVSD 323
Score = 42 (19.8 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 3 VSSINRVLRNLAAQ-KEQQASAHNQTSE 29
VSSI+R+LR+ + +E++A + +E
Sbjct: 151 VSSISRILRSKFGKGEEEEADLERKEAE 178
>WB|WBGene00044330 [details] [associations]
symbol:alr-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG313402 KO:K09452
GeneTree:ENSGT00700000104279 HSSP:P06601 EMBL:Z68008 PIR:T24046
RefSeq:NP_509860.1 ProteinModelPortal:Q21836 SMR:Q21836
STRING:Q21836 EnsemblMetazoa:R08B4.2 GeneID:181302
KEGG:cel:CELE_R08B4.2 UCSC:R08B4.2 CTD:181302 WormBase:R08B4.2
HOGENOM:HOG000021099 InParanoid:Q21836 OMA:ERSSTHH NextBio:913362
Uniprot:Q21836
Length = 362
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 44/110 (40%), Positives = 61/110 (55%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
G TP D+ E S D N E S +D + +R RT+F+ Q+D LEK
Sbjct: 78 GKKTPTG-DNILEAASVLD-NRENGSPSDGTNSPDDNGKRKQRRYRTTFSAFQLDELEKV 135
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 175
F RTHYPDVF RE LA ++ L EAR+QV NR + +K++++S H+
Sbjct: 136 FARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKY---RKQERSSTHH 182
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHN 278
K F RTHYPDVF RE LA ++ L EAR+QV NR + +K++++S H+
Sbjct: 134 KVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKY---RKQERSSTHH 182
>MGI|MGI:98218 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10090 "Mus
musculus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IGI] [GO:0042472 "inner ear morphogenesis"
evidence=IGI] [GO:0042474 "middle ear morphogenesis" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IGI] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IGI] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048844 "artery morphogenesis"
evidence=IGI] [GO:0051216 "cartilage development" evidence=IGI]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:98218 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329
eggNOG:NOG309174 CTD:51450 EMBL:X52875 EMBL:X14572 IPI:IPI00319581
PIR:I48410 RefSeq:NP_033142.2 UniGene:Mm.1802
ProteinModelPortal:Q06348 SMR:Q06348 MINT:MINT-1782155
STRING:Q06348 PhosphoSite:Q06348 PRIDE:Q06348 GeneID:20204
KEGG:mmu:20204 InParanoid:Q06348 NextBio:297791 CleanEx:MM_PRRX2
Genevestigator:Q06348 GermOnline:ENSMUSG00000039476 Uniprot:Q06348
Length = 247
Score = 165 (63.1 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRN-- 162
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR RN
Sbjct: 99 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNER 158
Query: 163 --LAAQKEQQASAHNQTSETVYDKL-RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVT 219
LA + ++ Q + R P + +P S+P S P++PG +
Sbjct: 159 AMLATRSASLLKSYGQEAAIEQPVAPRPTTMSPDYLSWPASSPYSSVP----PYSPGGSS 214
Query: 220 P 220
P
Sbjct: 215 P 215
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRN----LAAQKEQQASAHNQTS 281
FERTHYPD F RE LA ++ L EAR+QV NR RN LA + ++ Q +
Sbjct: 117 FERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLATRSASLLKSYGQEA 176
Query: 282 ETVYDKL-RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 323
R P + +P S+P S P++PG +P
Sbjct: 177 AIEQPVAPRPTTMSPDYLSWPASSPYSSVP----PYSPGGSSP 215
>UNIPROTKB|F1LMV3 [details] [associations]
symbol:Pax3 "Protein Pax3" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001755 "neural crest
cell migration" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0060594 "mammary gland specification" evidence=IEA] [GO:0071837
"HMG box domain binding" evidence=IPI] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027 PROSITE:PS00027
PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351
SMART:SM00389 RGD:620431 GO:GO:0005634 GO:GO:0007507 GO:GO:0008284
GO:GO:0008283 GO:GO:0001755 GO:GO:0043565 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003705 GO:GO:0000122 GO:GO:0007517 GO:GO:0001843
GO:GO:0021527 GO:GO:0048663 GO:GO:0048066 GO:GO:0060594
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:VHQSTLP IPI:IPI00765155 Ensembl:ENSRNOT00000018652
ArrayExpress:F1LMV3 Uniprot:F1LMV3
Length = 487
Score = 166 (63.5 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 83 SDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ S P S +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE L
Sbjct: 196 SERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 255
Query: 141 ADKIGLPEARIQVSSINRVLR 161
A + L EAR+QV NR R
Sbjct: 256 AQRAKLTEARVQVWFSNRRAR 276
Score = 120 (47.3 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLA-DKIGLPEARIQVSSINRVLRNLAAQ-KEQ 169
T ++ +E++R + P +F+ R++L D + VSSI+R+LR+ + +E+
Sbjct: 113 TTPDVEKKIEEYKREN-PGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE 171
Query: 170 QASAHNQTSETVYDKLR-MFNG-QPGWAWYPGS---TPTPSPAHLALPHNPG-SVTPISR 223
+A + +E K + +G A P S + S L L S T +
Sbjct: 172 EADLERKEAEESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTA 231
Query: 224 DDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
+ +E FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 232 EQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRAR 276
Score = 72 (30.4 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 339 QVWFSNRRAKWRRE 352
QVWFSNRRA+WR++
Sbjct: 267 QVWFSNRRARWRKQ 280
Score = 45 (20.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCLQQAARE 430
GGF P++M + SY P+ + QA +
Sbjct: 295 GGFPPTAMPTLPTYQLSETSYQPTSIPQAVSD 326
Score = 42 (19.8 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 3 VSSINRVLRNLAAQ-KEQQASAHNQTSE 29
VSSI+R+LR+ + +E++A + +E
Sbjct: 154 VSSISRILRSKFGKGEEEEADLERKEAE 181
>UNIPROTKB|F1SMS6 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:CU076088 Ensembl:ENSSSCT00000005417 Uniprot:F1SMS6
Length = 347
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 45/108 (41%), Positives = 61/108 (56%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 138 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYP-GSTPTPS--PAHLALP 212
+ +S Q S L P A P G++P S PA ALP
Sbjct: 198 LEVSSMKLQDSPL----LSFSRSPPAAALAPLGASPEGSGGPAGGALP 241
Score = 124 (48.7 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/92 (39%), Positives = 49/92 (53%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPL--- 210
Query: 287 KLRMFNGQPGWAWYP-GSTPTPS--PAHLALP 315
L P A P G++P S PA ALP
Sbjct: 211 -LSFSRSPPAAALAPLGASPEGSGGPAGGALP 241
>ZFIN|ZDB-GENE-990415-236 [details] [associations]
symbol:rx1 "retinal homeobox gene 1" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010842 "retina layer formation" evidence=IMP]
[GO:0003407 "neural retina development" evidence=IMP] [GO:0060219
"camera-type eye photoreceptor cell differentiation"
evidence=IGI;IMP] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-990415-236 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010842
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 GO:GO:0060219 HOVERGEN:HBG021349
KO:K09332 EMBL:CR936300 OMA:MVDDSCL EMBL:BC060890 IPI:IPI00481573
RefSeq:NP_571300.2 UniGene:Dr.75761 SMR:Q6P984 STRING:Q6P984
Ensembl:ENSDART00000106166 GeneID:30472 KEGG:dre:30472 CTD:30472
InParanoid:Q6P984 NextBio:20806865 Uniprot:Q6P984
Length = 330
Score = 170 (64.9 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 43/115 (37%), Positives = 62/115 (53%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR A+
Sbjct: 138 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR-----RAKW 192
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 222
+Q T + + FN P PT P + +LP +P +P+S
Sbjct: 193 RRQEKIDASTMKLHDSPMLSFNR-------PSMHPTVGPMNNSLPLDPWLPSPLS 240
Score = 123 (48.4 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR A+ +Q T +
Sbjct: 154 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR-----RAKWRRQEKIDASTMKLHDS 208
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
+ FN P PT P + +LP +P +P+S
Sbjct: 209 PMLSFNR-------PSMHPTVGPMNNSLPLDPWLPSPLS 240
>MGI|MGI:109330 [details] [associations]
symbol:Prop1 "paired like homeodomain factor 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001568 "blood
vessel development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0016477 "cell migration" evidence=IGI]
[GO:0021979 "hypothalamus cell differentiation" evidence=IMP]
[GO:0021984 "adenohypophysis development" evidence=IMP] [GO:0043066
"negative regulation of apoptotic process" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IDA] [GO:0048732 "gland
development" evidence=IMP] [GO:0048850 "hypophysis morphogenesis"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IGI] [GO:0060126 "somatotropin secreting cell
differentiation" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:109330 GO:GO:0043066
GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0060070
EMBL:AL627215 GeneTree:ENSGT00700000104273 GO:GO:0021979
GO:GO:0060126 CTD:5626 eggNOG:NOG293463 HOVERGEN:HBG053691
KO:K09327 OrthoDB:EOG4BZN3X GO:GO:0048850 OMA:TCFPHPY EMBL:U77946
IPI:IPI00125485 RefSeq:NP_032962.1 UniGene:Mm.1386
ProteinModelPortal:P97458 SMR:P97458 IntAct:P97458 STRING:P97458
PhosphoSite:P97458 DNASU:19127 Ensembl:ENSMUST00000051159
GeneID:19127 KEGG:mmu:19127 UCSC:uc007itg.1 InParanoid:Q5NCG9
NextBio:295738 Bgee:P97458 CleanEx:MM_PROP1 Genevestigator:P97458
GermOnline:ENSMUSG00000044542 Uniprot:P97458
Length = 223
Score = 147 (56.8 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 42/107 (39%), Positives = 56/107 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+F Q++ LE F R YPD++ARE LA GL EARIQV NR R A Q+
Sbjct: 67 RRHRTTFNPAQLEQLESAFGRNQYPDIWAREGLAQDTGLSEARIQVWFQNR--R--AKQR 122
Query: 168 EQQASAHNQTSETVYDKLRMFNG-QPGWAWYPGSTPTPSPAHLALPH 213
+Q+ S + F+G P + YP + TP P PH
Sbjct: 123 KQERSLLQPIAHL---STATFSGFLPESSAYPYTYGTPPPPAPCFPH 166
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 39/115 (33%), Positives = 50/115 (43%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F R YPD++ARE LA GL EARIQV NR R A Q++Q+ S +
Sbjct: 85 FGRNQYPDIWAREGLAQDTGLSEARIQVWFQNR--R--AKQRKQERSLLQPIAHL---ST 137
Query: 289 RMFNG-QPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSARQVWF 342
F+G P + YP + TP P PH P A L + W+
Sbjct: 138 ATFSGFLPESSAYPYTYGTPPPPAPCFPHPYSHSLPSQPSTAASLALPPQPEDWY 192
Score = 50 (22.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 299 WYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
WYP P P+ HL P P + P+S + K
Sbjct: 191 WYPTLHPAPT-GHLPCPPPP-PMFPLSLETPK 220
>MGI|MGI:97491 [details] [associations]
symbol:Pax7 "paired box gene 7" species:10090 "Mus musculus"
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=TAS] [GO:0010453
"regulation of cell fate commitment" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0014813
"satellite cell commitment" evidence=IMP] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0021904
"dorsal/ventral neural tube patterning" evidence=IDA] [GO:0031062
"positive regulation of histone methylation" evidence=IGI;IDA]
[GO:0043393 "regulation of protein binding" evidence=IMP]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IGI] [GO:0048706 "embryonic skeletal system
development" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0060415 "muscle tissue morphogenesis"
evidence=IGI] [GO:2000288 "positive regulation of myoblast
proliferation" evidence=IMP] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 MGI:MGI:97491
GO:GO:0043565 GO:GO:0043393 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338
GO:GO:0051216 GO:GO:0000983 GO:GO:0021527 GO:GO:0048663
GO:GO:0048706 GO:GO:0021904 GO:GO:0043403 GO:GO:0010453
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 KO:K09381
GO:GO:0060415 HOVERGEN:HBG009115 InterPro:IPR022106 Pfam:PF12360
HOGENOM:HOG000230939 CTD:5081 OrthoDB:EOG4JM7PH GO:GO:0014813
EMBL:AF254422 EMBL:U20792 IPI:IPI00135693 PIR:I49265
RefSeq:NP_035169.1 UniGene:Mm.218760 ProteinModelPortal:P47239
SMR:P47239 STRING:P47239 PhosphoSite:P47239 PRIDE:P47239
Ensembl:ENSMUST00000030508 GeneID:18509 KEGG:mmu:18509
InParanoid:P47239 NextBio:294240 Bgee:P47239 CleanEx:MM_PAX7
Genevestigator:P47239 GermOnline:ENSMUSG00000028736 Uniprot:P47239
Length = 503
Score = 176 (67.0 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 55/149 (36%), Positives = 74/149 (49%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 192 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 251
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 252 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 296
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER 231
T P L P + T IS+D R
Sbjct: 297 TLPPYQL--PDSTYPTTTISQDGGSTVHR 323
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 69/217 (31%), Positives = 96/217 (44%)
Query: 124 KEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKE--QQASAHNQT 177
+E++R + P +F+ R+RL + + VSSI+RVLR +KE ++ +
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEDDEEGDKKEED 177
Query: 178 SET-VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE----FER 231
E + G G GS P L L S T + + +E FER
Sbjct: 178 GEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEKAFER 236
Query: 232 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 291
THYPD++ RE LA + L EAR+QV NR A+ +QA A NQ L F
Sbjct: 237 THYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAF 282
Query: 292 NGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
N PG + P PT P L P + T IS+D
Sbjct: 283 NHLLPG-GFPPTGMPTLPPYQL--PDSTYPTTTISQD 316
Score = 39 (18.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 3 VSSINRVLRNLAAQKE 18
VSSI+RVLR +KE
Sbjct: 151 VSSISRVLRIKFGKKE 166
>RGD|1311471 [details] [associations]
symbol:Prrx2 "paired related homeobox 2" species:10116 "Rattus
norvegicus" [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0042474 "middle ear morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IEA;ISO] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA;ISO] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO] [GO:0048844 "artery
morphogenesis" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1311471 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 EMBL:CH474001 KO:K09329
OrthoDB:EOG4RR6J8 CTD:51450 IPI:IPI00372003 RefSeq:NP_001099209.1
UniGene:Rn.93004 Ensembl:ENSRNOT00000008270 GeneID:113931
KEGG:rno:113931 UCSC:RGD:1311471 NextBio:618046 Uniprot:D3ZLB3
Length = 248
Score = 164 (62.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 44/121 (36%), Positives = 63/121 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRN-- 162
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR RN
Sbjct: 100 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNER 159
Query: 163 --LAAQKEQQASAHNQTSETVYDKL-RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVT 219
LA + ++ Q + R P + +P S+P S P++PG +
Sbjct: 160 AMLATRSASLLKSYGQEAAIEQPVAPRPTTLSPDYLSWPASSPYSSVP----PYSPGGSS 215
Query: 220 P 220
P
Sbjct: 216 P 216
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRN----LAAQKEQQASAHNQTS 281
FERTHYPD F RE LA ++ L EAR+QV NR RN LA + ++ Q +
Sbjct: 118 FERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLATRSASLLKSYGQEA 177
Query: 282 ETVYDKL-RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 323
R P + +P S+P S P++PG +P
Sbjct: 178 AIEQPVAPRPTTLSPDYLSWPASSPYSSVP----PYSPGGSSP 216
>UNIPROTKB|E1C2N6 [details] [associations]
symbol:E1C2N6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
OMA:VHQSTLP EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00819860
Ensembl:ENSGALT00000008428 ArrayExpress:E1C2N6 Uniprot:E1C2N6
Length = 484
Score = 173 (66.0 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 52/147 (35%), Positives = 75/147 (51%)
Query: 87 SEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
++ + +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA + L
Sbjct: 199 AQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKL 258
Query: 147 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPTPS 205
EAR+QV NR A+ +QA A NQ L FN PG + P + PT
Sbjct: 259 TEARVQVWFSNR-----RARWRKQAGA-NQ--------LMAFNHLIPG-GFPPSAMPTLP 303
Query: 206 PAHLALP-HNPGSVTPISRDDAKEFER 231
L+ P + P S+ D + R
Sbjct: 304 TYQLSEPSYQPTSIPQAVSDPSSTVHR 330
>UNIPROTKB|A6NLG4 [details] [associations]
symbol:SHOX2 "cDNA FLJ38019 fis, clone CTONG2012758, highly
similar to Short stature homeobox protein 2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CH471052
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 UniGene:Hs.55967 HGNC:HGNC:10854
HOVERGEN:HBG007233 NextBio:25151 EMBL:AC112502 EMBL:AK095338
IPI:IPI01024865 SMR:A6NLG4 STRING:A6NLG4 Ensembl:ENST00000441443
Ensembl:ENST00000490689 Uniprot:A6NLG4
Length = 190
Score = 151 (58.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR R ++
Sbjct: 12 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR--RAKCRKQ 69
Query: 168 EQQ 170
E Q
Sbjct: 70 ENQ 72
>UNIPROTKB|H0YJ32 [details] [associations]
symbol:SHOX2 "Short stature homeobox protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HGNC:HGNC:10854
EMBL:AC112502 Ensembl:ENST00000555977 Uniprot:H0YJ32
Length = 178
Score = 151 (58.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR R ++
Sbjct: 45 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR--RAKCRKQ 102
Query: 168 EQQ 170
E Q
Sbjct: 103 ENQ 105
>UNIPROTKB|F1S3W3 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048589 "developmental growth" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008343
"adult feeding behavior" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:FP101978 Ensembl:ENSSSCT00000004315 Uniprot:F1S3W3
Length = 385
Score = 171 (65.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 51/141 (36%), Positives = 71/141 (50%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR------ 161
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 73 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 132
Query: 162 -----NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L QKE + S +E ++ QP PG P P+ HL+L
Sbjct: 133 SLQKEQLQKQKEAEGSHGEGKTEAPPPDTQLETEQP--PSLPGGDP-PAELHLSLSEQSA 189
Query: 217 SVT-PISRDDAKEFERTHYPD 236
S + P + D +E R D
Sbjct: 190 SESAPEDQPDREEDPRAGAED 210
Score = 116 (45.9 bits), Expect = 0.00063, P = 0.00063
Identities = 38/105 (36%), Positives = 48/105 (45%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR-----------NLAAQKEQQAS 275
K F++THYPDV RERLA LPEAR+QV NR + L QKE + S
Sbjct: 89 KTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQRSLQKEQLQKQKEAEGS 148
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGS 320
+E ++ QP PG P P+ HL+L S
Sbjct: 149 HGEGKTEAPPPDTQLETEQP--PSLPGGDP-PAELHLSLSEQSAS 190
>UNIPROTKB|F1NUP3 [details] [associations]
symbol:F1NUP3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0060594 "mammary gland specification" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
EMBL:AADN02024154 EMBL:AADN02024155 EMBL:AADN02024156
EMBL:AADN02024157 EMBL:AADN02024158 IPI:IPI00591508
Ensembl:ENSGALT00000040854 ArrayExpress:F1NUP3 Uniprot:F1NUP3
Length = 491
Score = 173 (66.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 52/147 (35%), Positives = 75/147 (51%)
Query: 87 SEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
++ + +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA + L
Sbjct: 206 AQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKL 265
Query: 147 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPTPS 205
EAR+QV NR A+ +QA A NQ L FN PG + P + PT
Sbjct: 266 TEARVQVWFSNR-----RARWRKQAGA-NQ--------LMAFNHLIPG-GFPPSAMPTLP 310
Query: 206 PAHLALP-HNPGSVTPISRDDAKEFER 231
L+ P + P S+ D + R
Sbjct: 311 TYQLSEPSYQPTSIPQAVSDPSSTVHR 337
>ZFIN|ZDB-GENE-980526-406 [details] [associations]
symbol:otx2 "orthodenticle homolog 2" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IGI] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0003406
"retinal pigment epithelium development" evidence=IGI] [GO:0042221
"response to chemical stimulus" evidence=IDA] InterPro:IPR001356
InterPro:IPR003022 InterPro:IPR003025 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PRINTS:PR01255 PRINTS:PR01257 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-980526-406 GO:GO:0005634 GO:GO:0043565
GO:GO:0042221 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030901 GO:GO:0030902 GO:GO:0030917
GeneTree:ENSGT00700000104128 HOGENOM:HOG000082677
HOVERGEN:HBG004028 eggNOG:NOG245767 KO:K09326 EMBL:D26173
EMBL:U14592 IPI:IPI00487412 PIR:I51752 RefSeq:NP_571326.1
UniGene:Dr.334 ProteinModelPortal:Q91981 SMR:Q91981 STRING:Q91981
Ensembl:ENSDART00000008816 Ensembl:ENSDART00000126097 GeneID:30501
KEGG:dre:30501 CTD:5015 InParanoid:Q91981 OMA:CPVATPR
OrthoDB:EOG4C87T5 NextBio:20806890 ArrayExpress:Q91981 Bgee:Q91981
Uniprot:Q91981
Length = 289
Score = 167 (63.8 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 43/123 (34%), Positives = 66/123 (53%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQT--SETVYDKLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVT 219
+QQ N+ ++ R + + G + P ST P+ + P +P S++
Sbjct: 99 QQQNGGQNKVRPAKKKSSPAREASSESGASGQFTPPSSTSVPAISTTTAPVSIWSPASIS 158
Query: 220 PIS 222
P+S
Sbjct: 159 PLS 161
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQT--SETVYD 286
F +T YPD+F RE +A KI LPE+R+QV NR + Q++QQ N+ ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQNGGQNKVRPAKKKSS 116
Query: 287 KLRMFNGQPGWAWY---PGSTPTPSPAHLALP---HNPGSVTPIS 325
R + + G + P ST P+ + P +P S++P+S
Sbjct: 117 PAREASSESGASGQFTPPSSTSVPAISTTTAPVSIWSPASISPLS 161
>ZFIN|ZDB-GENE-020905-5 [details] [associations]
symbol:prrx1a "paired related homeobox 1a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020905-5 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P06601
HOVERGEN:HBG021349 OrthoDB:EOG4RR6J8 eggNOG:NOG309174 EMBL:BX548024
EMBL:BC053228 IPI:IPI00493267 RefSeq:NP_999899.1 UniGene:Dr.32622
SMR:Q7T373 Ensembl:ENSDART00000041365 GeneID:406431 KEGG:dre:406431
CTD:406431 InParanoid:Q7T373 OMA:CANNTTA NextBio:20818028
Uniprot:Q7T373
Length = 245
Score = 157 (60.3 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR R +
Sbjct: 97 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNR--RAKFRRN 154
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
E+ A S L+ F+G+ P P P+P
Sbjct: 155 ERAMLASKNAS-----LLKSFSGEVTAVEQP-IVPRPAP 187
Score = 110 (43.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 32/81 (39%), Positives = 41/81 (50%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
FERTHYPD F RE LA ++ L EAR+QV NR R + E+ A S L
Sbjct: 115 FERTHYPDAFVREDLARRVNLTEARVQVWFQNR--RAKFRRNERAMLASKNAS-----LL 167
Query: 289 RMFNGQPGWAWYPGSTPTPSP 309
+ F+G+ P P P+P
Sbjct: 168 KSFSGEVTAVEQP-IVPRPAP 187
Score = 41 (19.5 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 407 YSSIPQPAGMDSYNPSC 423
+ S P + M +Y+PSC
Sbjct: 195 WGSSPSYSAMATYSPSC 211
>UNIPROTKB|F1SDX7 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
perception of mechanical stimulus" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0016048 "detection of
temperature stimulus" evidence=IEA] [GO:0009593 "detection of
chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS EMBL:CT990615
Ensembl:ENSSSCT00000011374 Uniprot:F1SDX7
Length = 263
Score = 165 (63.1 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 38/88 (43%), Positives = 52/88 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 34 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
EQ+ A +E +R N P
Sbjct: 94 GASEQEPGAKEPMAEVTPPPVRNINSPP 121
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ EQ+ A +E
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASEQEPGAKEPMAEVTP 111
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 112 PPVRNINSPP 121
>RGD|1564360 [details] [associations]
symbol:Pax7 "paired box 7" species:10116 "Rattus norvegicus"
[GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=ISO] [GO:0010453 "regulation of cell fate
commitment" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0014813 "satellite cell commitment"
evidence=IEA;ISO] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021904 "dorsal/ventral
neural tube patterning" evidence=IEA;ISO] [GO:0031062 "positive
regulation of histone methylation" evidence=ISO] [GO:0043393
"regulation of protein binding" evidence=ISO] [GO:0043403 "skeletal
muscle tissue regeneration" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048663 "neuron fate commitment"
evidence=IEA;ISO] [GO:0048706 "embryonic skeletal system
development" evidence=IEA;ISO] [GO:0051216 "cartilage development"
evidence=IEA;ISO] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:2000288 "positive regulation of myoblast
proliferation" evidence=ISO] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 RGD:1564360
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0051216 GO:GO:0021527 GO:GO:0048663 GO:GO:0048706
GO:GO:0021904 GO:GO:0043403 GeneTree:ENSGT00680000099553 KO:K09381
GO:GO:0060415 InterPro:IPR022106 Pfam:PF12360 CTD:5081 OMA:NPISASC
OrthoDB:EOG4JM7PH GO:GO:0014813 IPI:IPI00359124
RefSeq:NP_001178913.1 UniGene:Rn.226327 Ensembl:ENSRNOT00000025488
GeneID:500574 KEGG:rno:500574 NextBio:706635 Uniprot:D3ZRA8
Length = 503
Score = 175 (66.7 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 54/149 (36%), Positives = 74/149 (49%)
Query: 84 DINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
D + + +D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA +
Sbjct: 192 DKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQR 251
Query: 144 IGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTP 202
L EAR+QV NR A+ +QA A NQ L FN PG + P P
Sbjct: 252 TKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMP 296
Query: 203 TPSPAHLALPHNPGSVTPISRDDAKEFER 231
T P L P + T +S+D R
Sbjct: 297 TLPPYQL--PDSAYPTTTVSQDGGSTVHR 323
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 68/217 (31%), Positives = 96/217 (44%)
Query: 124 KEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKE--QQASAHNQT 177
+E++R + P +F+ R+RL + + VSSI+RVLR +KE ++ +
Sbjct: 119 EEYKREN-PGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEDDEEGDKKEED 177
Query: 178 SET-VYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG-SVTPISRDDAKE----FER 231
E + G G GS P L L S T + + +E FER
Sbjct: 178 GEKKAKHSIDGILGDKGNRLDEGSDVESEP-DLPLKRKQRRSRTTFTAEQLEELEKAFER 236
Query: 232 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMF 291
THYPD++ RE LA + L EAR+QV NR A+ +QA A NQ L F
Sbjct: 237 THYPDIYTREELAQRTKLTEARVQVWFSNR-----RARWRKQAGA-NQ--------LAAF 282
Query: 292 NGQ-PGWAWYPGSTPTPSPAHLALPHNPGSVTPISRD 327
N PG + P PT P L P + T +S+D
Sbjct: 283 NHLLPG-GFPPTGMPTLPPYQL--PDSAYPTTTVSQD 316
Score = 39 (18.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 3 VSSINRVLRNLAAQKE 18
VSSI+RVLR +KE
Sbjct: 151 VSSISRVLRIKFGKKE 166
>UNIPROTKB|H0YLI9 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YLI9 SMR:H0YLI9
Ensembl:ENST00000558872 Bgee:H0YLI9 Uniprot:H0YLI9
Length = 225
Score = 159 (61.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 39/91 (42%), Positives = 53/91 (58%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 99 EKREDVKSE-----DEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
L+ ++GL EAR+QV NR R ++E Q
Sbjct: 150 LSQRLGLSEARVQVWFQNR--RAKCRKQENQ 178
>UNIPROTKB|H0YAD2 [details] [associations]
symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC105389 HGNC:HGNC:9143
Ensembl:ENST00000510424 Uniprot:H0YAD2
Length = 180
Score = 150 (57.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRNLA 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR +
Sbjct: 39 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 98
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
A A+A N +S D R + + P ST P P
Sbjct: 99 AAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGP 140
Score = 113 (44.8 bits), Expect = 0.00015, P = 0.00015
Identities = 42/126 (33%), Positives = 53/126 (42%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR---VLRNLAAQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR + A
Sbjct: 43 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAA 102
Query: 272 QQASAHNQTSETVYDKLRMFNGQ------PGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
A+A N +S D R + P PG P P+P+ A G +P
Sbjct: 103 AAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAG 162
Query: 326 RDDAKG 331
A G
Sbjct: 163 APGAAG 168
>UNIPROTKB|G3V4R6 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 GO:GO:0060021 GO:GO:0048844 GO:GO:0048701
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 EMBL:Z97200
HGNC:HGNC:9142 ChiTaRS:PRRX1 ProteinModelPortal:G3V4R6 SMR:G3V4R6
Ensembl:ENST00000553786 ArrayExpress:G3V4R6 Bgee:G3V4R6
Uniprot:G3V4R6
Length = 93
Score = 150 (57.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV
Sbjct: 48 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQV 93
Score = 103 (41.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQV 256
FERTHYPD F RE LA ++ L EAR+QV
Sbjct: 66 FERTHYPDAFVREDLARRVNLTEARVQV 93
>FB|FBgn0000061 [details] [associations]
symbol:al "aristaless" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0007449 "proximal/distal pattern formation,
imaginal disc" evidence=NAS] [GO:0048800 "antennal morphogenesis"
evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0035015
"elongation of arista core" evidence=IMP] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IEP] [GO:0035218
"leg disc development" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0007480 "imaginal
disc-derived leg morphogenesis" evidence=IMP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0045892 GO:GO:0043234
EMBL:AE014134 GO:GO:0003700 GO:GO:0045747 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0022416 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 EMBL:L08401
EMBL:AY121696 PIR:A40685 RefSeq:NP_722629.1 UniGene:Dm.6423
PDB:3A01 PDB:3A02 PDB:3LNQ PDBsum:3A01 PDBsum:3A02 PDBsum:3LNQ
ProteinModelPortal:Q06453 SMR:Q06453 DIP:DIP-23247N IntAct:Q06453
MINT:MINT-827785 STRING:Q06453 EnsemblMetazoa:FBtr0078053
GeneID:33208 KEGG:dme:Dmel_CG3935 UCSC:CG3935-RA CTD:33208
FlyBase:FBgn0000061 eggNOG:NOG313402 InParanoid:Q06453 KO:K09452
OMA:FTHLGFQ OrthoDB:EOG41ZCSM PhylomeDB:Q06453
EvolutionaryTrace:Q06453 GenomeRNAi:33208 NextBio:782439
Bgee:Q06453 GermOnline:CG3935 GO:GO:0000976 GO:GO:0035015
GO:GO:0007480 Uniprot:Q06453
Length = 408
Score = 168 (64.2 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 38/73 (52%), Positives = 45/73 (61%)
Query: 87 SEPNSSADEDSQMXXXXXXXXQRN-RTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+ P S + D + QR RT+FT+ Q++ LEK F RTHYPDVF RE LA KIG
Sbjct: 64 NSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIG 123
Query: 146 LPEARIQVSSINR 158
L EARIQV NR
Sbjct: 124 LTEARIQVWFQNR 136
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 26/35 (74%), Positives = 26/35 (74%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
K F RTHYPDVF RE LA KIGL EARIQV NR
Sbjct: 102 KAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
Score = 42 (19.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 204 PSPAHLALPHNPGSVTP 220
P P+H A P P + TP
Sbjct: 355 PPPSHQAPPPPPRAATP 371
Score = 42 (19.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 307 PSPAHLALPHNPGSVTP 323
P P+H A P P + TP
Sbjct: 355 PPPSHQAPPPPPRAATP 371
>UNIPROTKB|Q645N4 [details] [associations]
symbol:pax3-a "Paired box protein Pax-3-A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0014029 "neural crest formation" evidence=IGI;IMP] [GO:0014034
"neural crest cell fate commitment" evidence=IGI;IMP] [GO:0016055
"Wnt receptor signaling pathway" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048785 "hatching gland development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0008543
GO:GO:0045893 GO:GO:0007399 GO:GO:0016055 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601 GO:GO:0014034
KO:K09381 HOVERGEN:HBG009115 EMBL:AY757358 EMBL:AY725269
EMBL:BC108573 RefSeq:NP_001088993.1 UniGene:Xl.49495
ProteinModelPortal:Q645N4 SMR:Q645N4 GeneID:496376 KEGG:xla:496376
CTD:496376 Xenbase:XB-GENE-482744 GO:GO:0048785 InterPro:IPR022106
Pfam:PF12360 Uniprot:Q645N4
Length = 484
Score = 171 (65.3 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 48/143 (33%), Positives = 67/143 (46%)
Query: 85 INSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
++ E +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA +
Sbjct: 198 VSPESEEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRA 257
Query: 145 GLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS-TPT 203
L EAR+QV NR R Q A N + M P + S PT
Sbjct: 258 KLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPAAM-PALPTYQLSETSYQPT 316
Query: 204 PSPAHLALP----HNPGSVTPIS 222
P ++ P H P + P S
Sbjct: 317 SIPQAVSDPSNTVHRPQPLPPSS 339
Score = 118 (46.6 bits), Expect = 0.00055, P = 0.00055
Identities = 62/235 (26%), Positives = 98/235 (41%)
Query: 115 TNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI--QVSSINRVLRN------- 162
T +++ +EF+R + P +F+ R++L K G+ + VSSI+R+LR+
Sbjct: 110 TTPEVEKKMEEFKRDN-PGMFSWEIRDKLL-KDGVCDRNTVPSVSSISRILRSKFGKGDE 167
Query: 163 --LAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG-SVT 219
+ +++Q + + ++ LR P + S L L S T
Sbjct: 168 EDMELDRKEQEESEKRAKHSIDGILR--ERAPVSPESEEGSDIDSEPDLPLKRKQRRSRT 225
Query: 220 PISRDDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQAS 275
+ + +E FERTHYPD++ RE LA + L EAR+QV NR R Q
Sbjct: 226 TFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLM 285
Query: 276 AHNQTSETVYDKLRMFNGQPGWAWYPGS-TPTPSPAHLALP----HNPGSVTPIS 325
A N + M P + S PT P ++ P H P + P S
Sbjct: 286 AFNHLIPGAFPPAAM-PALPTYQLSETSYQPTSIPQAVSDPSNTVHRPQPLPPSS 339
>UNIPROTKB|Q9H161 [details] [associations]
symbol:ALX4 "Homeobox protein aristaless-like 4"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA;NAS] [GO:0001501 "skeletal system
development" evidence=NAS] [GO:0001942 "hair follicle development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0042981 GO:GO:0009952
GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0009791 GO:GO:0001942 GO:GO:0001501 GO:GO:0007517
GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
CTD:60529 HOVERGEN:HBG004214 KO:K09451 EMBL:AF294629 EMBL:AF308822
EMBL:AF308823 EMBL:AF308824 EMBL:AF308825 EMBL:AJ404888
EMBL:AJ279074 EMBL:AJ279075 EMBL:AJ279076 EMBL:AJ279077
EMBL:AB058691 IPI:IPI00334769 RefSeq:NP_068745.2 UniGene:Hs.436055
PDB:2M0C PDBsum:2M0C ProteinModelPortal:Q9H161 SMR:Q9H161
STRING:Q9H161 PhosphoSite:Q9H161 DMDM:254763249 PaxDb:Q9H161
PRIDE:Q9H161 DNASU:60529 Ensembl:ENST00000329255 GeneID:60529
KEGG:hsa:60529 UCSC:uc001myb.3 GeneCards:GC11M044238 HGNC:HGNC:450
MIM:601224 MIM:605420 MIM:609597 MIM:613451 neXtProt:NX_Q9H161
Orphanet:228390 Orphanet:60015 Orphanet:52022 PharmGKB:PA24755
eggNOG:NOG309608 InParanoid:Q9H161 OMA:KFQPQPS OrthoDB:EOG4ZGPCG
PhylomeDB:Q9H161 GenomeRNAi:60529 NextBio:65433 Bgee:Q9H161
CleanEx:HS_ALX4 Genevestigator:Q9H161 GermOnline:ENSG00000052850
GO:GO:0048565 GO:GO:0042733 Uniprot:Q9H161
Length = 411
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 51/145 (35%), Positives = 76/145 (52%)
Query: 78 EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ ++SD+ S P AD +S +RNRT+FT+ Q++ LEK F++THYPDV+AR
Sbjct: 191 QDRASSDLPS-PLEKADSESNKGKK-----RRNRTTFTSYQLEELEKVFQKTHYPDVYAR 244
Query: 138 ERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVYDKLRMFN----G 190
E+LA + L EAR+QV NR + ++ QQ H T+ + R N
Sbjct: 245 EQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQ 304
Query: 191 QPGWAWYPGSTPTPSPAHLALPHNP 215
P W G+ +P PA +P +P
Sbjct: 305 NPSWLGNNGAA-SPVPA-CVVPCDP 327
>FB|FBgn0001148 [details] [associations]
symbol:gsb "gooseberry" species:7227 "Drosophila
melanogaster" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=ISS] [GO:0007367 "segment polarity determination"
evidence=NAS] [GO:0005634 "nucleus" evidence=IMP;NAS] [GO:0007419
"ventral cord development" evidence=TAS] [GO:0007435 "salivary
gland morphogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IMP] [GO:0007268 "synaptic transmission" evidence=IDA]
[GO:0060025 "regulation of synaptic activity" evidence=IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS00034
PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0005737 GO:GO:0007435
GO:GO:0007419 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007367
GO:GO:0000977 eggNOG:NOG326044 GeneTree:ENSGT00680000099553
KO:K09381 OrthoDB:EOG42BVRM EMBL:M14944 EMBL:M14942 PIR:A43698
RefSeq:NP_523863.1 UniGene:Dm.23955 ProteinModelPortal:P09082
SMR:P09082 DIP:DIP-18421N IntAct:P09082 MINT:MINT-1012438
STRING:P09082 PRIDE:P09082 EnsemblMetazoa:FBtr0072444 GeneID:38005
KEGG:dme:Dmel_CG3388 CTD:38005 FlyBase:FBgn0001148
HOGENOM:HOG000264208 InParanoid:P09082 OMA:RIFARTQ PhylomeDB:P09082
GenomeRNAi:38005 NextBio:806506 Bgee:P09082 GermOnline:CG3388
GO:GO:0060025 Uniprot:P09082
Length = 427
Score = 169 (64.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 39/94 (41%), Positives = 54/94 (57%)
Query: 85 INSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
+ SE S ++D++ +R+RT+F+N+QID+LE+ F RT YPDV+ RE LA
Sbjct: 165 VGSEDES--EDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQST 222
Query: 145 GLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 178
GL EAR+QV NR R QQ + TS
Sbjct: 223 GLTEARVQVWFSNRRARLRKQLNTQQVPSFAPTS 256
>UNIPROTKB|J9P9S0 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104279
CTD:5396 KO:K09329 EMBL:AAEX03005214 EMBL:AAEX03005215
GeneID:609105 KEGG:cfa:609105 RefSeq:XP_862211.1
ProteinModelPortal:J9P9S0 Ensembl:ENSCAFT00000049641 Uniprot:J9P9S0
Length = 217
Score = 155 (59.6 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>UNIPROTKB|Q643W9 [details] [associations]
symbol:Prrx1 "Paired mesoderm homeobox protein 1"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
EMBL:CH473958 HOVERGEN:HBG021349 UniGene:Rn.203584 EMBL:AY730764
IPI:IPI00471690 SMR:Q643W9 STRING:Q643W9 Ensembl:ENSRNOT00000042557
Genevestigator:Q643W9 Uniprot:Q643W9
Length = 217
Score = 155 (59.6 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>MGI|MGI:109632 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0021854 "hypothalamus development" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:109632 GO:GO:0005634 EMBL:CH466528
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 eggNOG:NOG261733 GO:GO:0021854
GeneTree:ENSGT00700000104256 CleanEx:MM_RAX HOVERGEN:HBG021349
OrthoDB:EOG4V4387 CTD:30062 KO:K09332 OMA:CGPGFGD ChiTaRS:RAX
EMBL:AF001906 EMBL:U73177 EMBL:BC024731 EMBL:BC058757
IPI:IPI00132598 RefSeq:NP_038861.2 UniGene:Mm.489746
ProteinModelPortal:O35602 SMR:O35602 STRING:O35602
PhosphoSite:O35602 PRIDE:O35602 Ensembl:ENSMUST00000025396
GeneID:19434 KEGG:mmu:19434 InParanoid:Q6GT92 NextBio:296571
Bgee:O35602 Genevestigator:O35602 GermOnline:ENSMUSG00000024518
Uniprot:O35602
Length = 342
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/117 (38%), Positives = 61/117 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 137 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 196
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYP-GSTPTPS--PAHLALPHNPGSVTPI 221
+ +S Q S L P A P G+ P P ALP P P+
Sbjct: 197 LEVSSMKLQDSPL----LSFSRSPPSSALAPLGTGPGSGSGPPGSALPLEPWLGPPL 249
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 38/109 (34%), Positives = 51/109 (46%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPL--- 209
Query: 287 KLRMFNGQPGWAWYP-GSTPTPS--PAHLALPHNPGSVTPISRDDAKGL 332
L P A P G+ P P ALP P P+ A L
Sbjct: 210 -LSFSRSPPSSALAPLGTGPGSGSGPPGSALPLEPWLGPPLPGGGATAL 257
>UNIPROTKB|E1BDA0 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954 "sensory
perception of mechanical stimulus" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021516 "dorsal
spinal cord development" evidence=IEA] [GO:0016048 "detection of
temperature stimulus" evidence=IEA] [GO:0009593 "detection of
chemical stimulus" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001764
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 CTD:644168 OMA:KGSPLCS
EMBL:DAAA02062229 IPI:IPI00734128 RefSeq:XP_002699015.1
Ensembl:ENSBTAT00000015907 GeneID:521995 KEGG:bta:521995
NextBio:20873419 Uniprot:E1BDA0
Length = 263
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 34 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 94 GASDQEPGAKEPMAEVTPPPVRNLNSPP 121
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 111
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 112 PPVRNLNSPP 121
>UNIPROTKB|A6NNA5 [details] [associations]
symbol:DRGX "Dorsal root ganglia homeobox protein"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 EMBL:CH471187 EMBL:AC027674 IPI:IPI00060044
UniGene:Hs.534530 ProteinModelPortal:A6NNA5 SMR:A6NNA5
STRING:A6NNA5 PhosphoSite:A6NNA5 PRIDE:A6NNA5
Ensembl:ENST00000374139 UCSC:uc021pqd.1 GeneCards:GC10M050573
HGNC:HGNC:21536 HPA:HPA043978 MIM:606701 neXtProt:NX_A6NNA5
eggNOG:NOG39948 HOVERGEN:HBG106743 InParanoid:A6NNA5
OrthoDB:EOG49CQ88 PhylomeDB:A6NNA5 ArrayExpress:A6NNA5 Bgee:A6NNA5
CleanEx:HS_DRGX Genevestigator:A6NNA5 Uniprot:A6NNA5
Length = 263
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 34 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 94 GASDQEPGAKEPMAEVTPPPVRNINSPP 121
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 111
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 112 PPVRNINSPP 121
>MGI|MGI:2148204 [details] [associations]
symbol:Prrxl1 "paired related homeobox protein-like 1"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0009593 "detection of chemical stimulus"
evidence=IMP] [GO:0016048 "detection of temperature stimulus"
evidence=IMP] [GO:0021516 "dorsal spinal cord development"
evidence=IMP] [GO:0021559 "trigeminal nerve development"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:2148204 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0021559 GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743
OrthoDB:EOG49CQ88 EMBL:EU670677 EMBL:EU670678 EMBL:AK039633
EMBL:BC132613 EMBL:BC145917 EMBL:AY116506 IPI:IPI00280476
IPI:IPI00896701 RefSeq:NP_001001796.1 UniGene:Mm.119274 HSSP:Q99697
ProteinModelPortal:Q8BYH0 SMR:Q8BYH0 STRING:Q8BYH0
PhosphoSite:Q8BYH0 PRIDE:Q8BYH0 Ensembl:ENSMUST00000068938
GeneID:107751 KEGG:mmu:107751 CTD:107751 HOGENOM:HOG000207632
InParanoid:B2ZIF4 OMA:PPARNIN NextBio:359376 Bgee:Q8BYH0
CleanEx:MM_PRRXL1 Genevestigator:Q8BYH0 GO:GO:0009593 GO:GO:0016048
GO:GO:0050954 Uniprot:Q8BYH0
Length = 263
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 34 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 94 GASDQEPGAKEPMAEVTPPPVRNINSPP 121
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 111
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 112 PPVRNINSPP 121
>UNIPROTKB|Q9PVX0 [details] [associations]
symbol:RX2 "Retinal homeobox protein Rx2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG021349
EMBL:AB020318 IPI:IPI00590568 UniGene:Gga.27
ProteinModelPortal:Q9PVX0 SMR:Q9PVX0 Uniprot:Q9PVX0
Length = 317
Score = 165 (63.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/119 (38%), Positives = 61/119 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 123 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEK 182
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPT------PSPAHLALPHNPGSVTP 220
+ +S Q S + R P A GS P P P AL PG P
Sbjct: 183 LEVSSMKLQDSP-ILSFSRSPQAAPVGA-LGGSLPLETWLGPPVPGGAALQSLPGFAAP 239
Score = 118 (46.6 bits), Expect = 0.00027, P = 0.00027
Identities = 37/103 (35%), Positives = 49/103 (47%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S +
Sbjct: 139 RAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSP-ILS 197
Query: 287 KLRMFNGQPGWAWYPGSTPT------PSPAHLALPHNPGSVTP 323
R P A GS P P P AL PG P
Sbjct: 198 FSRSPQAAPVGA-LGGSLPLETWLGPPVPGGAALQSLPGFAAP 239
>UNIPROTKB|E2QSM2 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0050954
"sensory perception of mechanical stimulus" evidence=IEA]
[GO:0021559 "trigeminal nerve development" evidence=IEA]
[GO:0021516 "dorsal spinal cord development" evidence=IEA]
[GO:0016048 "detection of temperature stimulus" evidence=IEA]
[GO:0009593 "detection of chemical stimulus" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021559 GO:GO:0021516
GO:GO:0009593 GO:GO:0016048 GO:GO:0050954 OMA:KGSPLCS
EMBL:AAEX03015368 EMBL:AAEX03015367 Ensembl:ENSCAFT00000010667
Uniprot:E2QSM2
Length = 264
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 35 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 94
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 95 GASDQEPGAKEPMAEVTPPPVRNINSPP 122
Score = 113 (44.8 bits), Expect = 0.00065, P = 0.00065
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 53 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 112
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 113 PPVRNINSPP 122
>UNIPROTKB|C9JW76 [details] [associations]
symbol:DRGX "Dorsal root ganglia homeobox protein"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0009593 "detection of chemical stimulus" evidence=IEA]
[GO:0016048 "detection of temperature stimulus" evidence=IEA]
[GO:0021516 "dorsal spinal cord development" evidence=IEA]
[GO:0021559 "trigeminal nerve development" evidence=IEA]
[GO:0050954 "sensory perception of mechanical stimulus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0021559 GO:GO:0021516 EMBL:AC027674
UniGene:Hs.534530 HGNC:HGNC:21536 GO:GO:0009593 GO:GO:0016048
GO:GO:0050954 IPI:IPI00943047 RefSeq:NP_001073989.1
ProteinModelPortal:C9JW76 SMR:C9JW76 STRING:C9JW76
Ensembl:ENST00000434016 GeneID:644168 KEGG:hsa:644168
UCSC:uc010qgq.2 CTD:644168 PharmGKB:PA162384078 OMA:KGSPLCS
GenomeRNAi:644168 NextBio:115949 ArrayExpress:C9JW76 Bgee:C9JW76
Uniprot:C9JW76
Length = 268
Score = 162 (62.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 39 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 98
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 99 GASDQEPGAKEPMAEVTPPPVRNINSPP 126
Score = 113 (44.8 bits), Expect = 0.00067, P = 0.00067
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 57 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 116
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 117 PPVRNINSPP 126
>UNIPROTKB|Q4LAL6 [details] [associations]
symbol:ALX4 "Homeobox protein aristaless-like 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 EMBL:AM048630
IPI:IPI00714667 RefSeq:NP_001025475.1 UniGene:Bt.47446
ProteinModelPortal:Q4LAL6 SMR:Q4LAL6 PRIDE:Q4LAL6 GeneID:594846
KEGG:bta:594846 CTD:60529 HOVERGEN:HBG004214 KO:K09451
NextBio:20892408 Uniprot:Q4LAL6
Length = 397
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 50/145 (34%), Positives = 76/145 (52%)
Query: 78 EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ +++D+ S P AD +S +RNRT+FT+ Q++ LEK F++THYPDV+AR
Sbjct: 177 QDRASADLPS-PMEKADSESNKGKK-----RRNRTTFTSYQLEELEKVFQKTHYPDVYAR 230
Query: 138 ERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVYDKLRMFN----G 190
E+LA + L EAR+QV NR + ++ QQ H T+ + R N
Sbjct: 231 EQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQ 290
Query: 191 QPGWAWYPGSTPTPSPAHLALPHNP 215
P W G+ +P PA +P +P
Sbjct: 291 NPSWIGNNGAA-SPVPA-CVVPCDP 313
>UNIPROTKB|Q28DP6 [details] [associations]
symbol:pax3 "Paired box protein Pax-3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=ISS] [GO:0014029 "neural crest formation" evidence=ISS]
[GO:0014034 "neural crest cell fate commitment" evidence=ISS]
[GO:0016055 "Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0048785 "hatching gland development"
evidence=ISS] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0008543 GO:GO:0045893 GO:GO:0007399 GO:GO:0016055
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014034
eggNOG:NOG326044 KO:K09381 HOVERGEN:HBG009115 GO:GO:0048785
InterPro:IPR022106 Pfam:PF12360 CTD:5077 HOGENOM:HOG000230939
EMBL:CR855399 RefSeq:NP_001006776.2 UniGene:Str.44149 STRING:Q28DP6
GeneID:448464 KEGG:xtr:448464 Xenbase:XB-GENE-482740 Bgee:Q28DP6
Uniprot:Q28DP6
Length = 461
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/140 (34%), Positives = 65/140 (46%)
Query: 88 EPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA + L
Sbjct: 177 ESEEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLT 236
Query: 148 EARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS-TPTPSP 206
EAR+QV NR R Q A N + M P + S PT P
Sbjct: 237 EARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPAAM-PALPTYQLSETSYQPTSIP 295
Query: 207 AHLALP----HNPGSVTPIS 222
++ P H P + P S
Sbjct: 296 QAVSDPSNTVHRPQPLPPSS 315
>UNIPROTKB|F1PD53 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472 GO:GO:0030326
GO:GO:0051216 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 OMA:GVSMANS
EMBL:AAEX03006849 EMBL:AAEX03006847 EMBL:AAEX03006848
EMBL:AAEX03006850 EMBL:AAEX03006851 Ensembl:ENSCAFT00000031799
Uniprot:F1PD53
Length = 234
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/121 (36%), Positives = 65/121 (53%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 86 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK---FRR 142
Query: 168 EQQASAHNQTSETV--YDKLRMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVT 219
++A N+++ + Y + QP A P S T SP P++PG
Sbjct: 143 NERAMLANRSATLLKSYSQEAAIE-QPVAPRPTALSPDYLSWTTSSPYSTVPPYSPGGSG 201
Query: 220 P 220
P
Sbjct: 202 P 202
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 36/103 (34%), Positives = 51/103 (49%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV--YD 286
FERTHYPD F RE LA ++ L EAR+QV NR + ++ ++A N+++ + Y
Sbjct: 104 FERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK---FRRNERAMLANRSATLLKSYS 160
Query: 287 KLRMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVTP 323
+ QP A P S T SP P++PG P
Sbjct: 161 QEAAIE-QPVAPRPTALSPDYLSWTTSSPYSTVPPYSPGGSGP 202
>UNIPROTKB|J9P7P0 [details] [associations]
symbol:PRRX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:AAEX03006849 EMBL:AAEX03006847 EMBL:AAEX03006848
EMBL:AAEX03006850 EMBL:AAEX03006851 Ensembl:ENSCAFT00000045911
Uniprot:J9P7P0
Length = 234
Score = 158 (60.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/121 (36%), Positives = 65/121 (53%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 86 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK---FRR 142
Query: 168 EQQASAHNQTSETV--YDKLRMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVT 219
++A N+++ + Y + QP A P S T SP P++PG
Sbjct: 143 NERAMLANRSATLLKSYSQEAAIE-QPVAPRPTALSPDYLSWTTSSPYSTVPPYSPGGSG 201
Query: 220 P 220
P
Sbjct: 202 P 202
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 36/103 (34%), Positives = 51/103 (49%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETV--YD 286
FERTHYPD F RE LA ++ L EAR+QV NR + ++ ++A N+++ + Y
Sbjct: 104 FERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK---FRRNERAMLANRSATLLKSYS 160
Query: 287 KLRMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVTP 323
+ QP A P S T SP P++PG P
Sbjct: 161 QEAAIE-QPVAPRPTALSPDYLSWTTSSPYSTVPPYSPGGSGP 202
>UNIPROTKB|Q6RFH8 [details] [associations]
symbol:DUX4L9 "Double homeobox protein 4C" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0008283 "cell proliferation"
evidence=IDA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0008283
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 GO:GO:0010468 EMBL:AY500824 EMBL:AF146191
IPI:IPI00874112 UniGene:Hs.742140 ProteinModelPortal:Q6RFH8
SMR:Q6RFH8 STRING:Q6RFH8 PhosphoSite:Q6RFH8 PRIDE:Q6RFH8
GeneCards:GC04M190943 H-InvDB:HIX0020902 HGNC:HGNC:33855
neXtProt:NX_Q6RFH8 eggNOG:NOG323819 HOVERGEN:HBG063255
Uniprot:Q6RFH8
Length = 374
Score = 114 (45.2 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 110 (43.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 162
+R RT+ T Q L + FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 95 RRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 88 (36.0 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 46 (21.3 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 296 GWAWYP--GSTPTPSPAHLALPHNPGSVTPISRDDAKGLVQQSAR 338
G AW P G+ P P PA P + T S A +Q+ R
Sbjct: 320 GAAWEPQAGAAPPPQPAP---PDASAASTDASHPGASQPLQEPGR 361
Score = 43 (20.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>RGD|620371 [details] [associations]
symbol:Rax "retina and anterior neural fold homeobox"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0021854 "hypothalamus development" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060173 "limb
development" evidence=ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/116 (37%), Positives = 59/116 (50%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 138 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYP--GSTPTPSPAHLALPHNPGSVTPI 221
+ +S Q S L P A P G P ALP P P+
Sbjct: 198 LEVSSMKLQDSPL----LSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLGPPL 249
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 37/108 (34%), Positives = 49/108 (45%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPL--- 210
Query: 287 KLRMFNGQPGWAWYP--GSTPTPSPAHLALPHNPGSVTPISRDDAKGL 332
L P A P G P ALP P P+ A L
Sbjct: 211 -LSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLGPPLPGGGATAL 257
>UNIPROTKB|Q9JLT7 [details] [associations]
symbol:Rax "Retinal homeobox protein Rx" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620371 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062
KO:K09332 EMBL:AF320225 EMBL:AF320224 EMBL:AF135839 IPI:IPI00204057
IPI:IPI00760132 RefSeq:NP_446130.1 UniGene:Rn.87955
ProteinModelPortal:Q9JLT7 SMR:Q9JLT7 STRING:Q9JLT7 PRIDE:Q9JLT7
GeneID:114213 KEGG:rno:114213 UCSC:RGD:620371 InParanoid:Q9JLT7
NextBio:618425 ArrayExpress:Q9JLT7 Genevestigator:Q9JLT7
GermOnline:ENSRNOG00000016944 Uniprot:Q9JLT7
Length = 342
Score = 165 (63.1 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/116 (37%), Positives = 59/116 (50%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 138 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 197
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYP--GSTPTPSPAHLALPHNPGSVTPI 221
+ +S Q S L P A P G P ALP P P+
Sbjct: 198 LEVSSMKLQDSPL----LSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLGPPL 249
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 37/108 (34%), Positives = 49/108 (45%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 154 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDSPL--- 210
Query: 287 KLRMFNGQPGWAWYP--GSTPTPSPAHLALPHNPGSVTPISRDDAKGL 332
L P A P G P ALP P P+ A L
Sbjct: 211 -LSFSRSPPSSALAPLGGPGSGSGPPGSALPLEPWLGPPLPGGGATAL 257
>UNIPROTKB|Q0IH87 [details] [associations]
symbol:pax3-b "Paired box protein Pax-3-B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IGI]
[GO:0014029 "neural crest formation" evidence=IGI;IMP] [GO:0014034
"neural crest cell fate commitment" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IGI] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0048785 "hatching gland development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0008543
GO:GO:0045893 GO:GO:0007399 GO:GO:0016055 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0014034 KO:K09381
HOVERGEN:HBG009115 GO:GO:0048785 InterPro:IPR022106 Pfam:PF12360
EMBL:AY757359 EMBL:AY725268 EMBL:BC123263 RefSeq:NP_001088994.1
UniGene:Xl.54870 GeneID:496377 KEGG:xla:496377 CTD:496377
Xenbase:XB-GENE-6252072 Uniprot:Q0IH87
Length = 483
Score = 168 (64.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 48/140 (34%), Positives = 65/140 (46%)
Query: 88 EPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE LA + L
Sbjct: 200 ESEEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLT 259
Query: 148 EARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS-TPTPSP 206
EAR+QV NR R Q A N + M P + S PT P
Sbjct: 260 EARVQVWFSNRRARWRKQAGANQLMAFNHLIPGAFPPTAM-PALPTYQLSETSYQPTSIP 318
Query: 207 AHLALP----HNPGSVTPIS 222
++ P H P + P S
Sbjct: 319 QAVSDPSNTVHRPQPLPPSS 338
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 62/240 (25%), Positives = 100/240 (41%)
Query: 110 NRTSFTNEQIDSLEKEFERTHYPDVFA---RERLADKIGLPEARI--QVSSINRVLRN-- 162
++ T +++ +EF+R + P +F+ R++L K G+ + VSSI+R+LR+
Sbjct: 104 SKPKVTTPEVEKKIEEFKRDN-PGMFSWEIRDKLL-KDGVCDRNTVPSVSSISRILRSKF 161
Query: 163 -------LAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 215
+ +++Q + + ++ LR P + S L L
Sbjct: 162 GKGDEEDMELDRKEQEESEKRAKHSIDGILR--ERAPASPESEEGSDIDSEPDLPLKRKQ 219
Query: 216 G-SVTPISRDDAKE----FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 270
S T + + +E FERTHYPD++ RE LA + L EAR+QV NR R
Sbjct: 220 RRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAG 279
Query: 271 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGS-TPTPSPAHLALP----HNPGSVTPIS 325
Q A N + M P + S PT P ++ P H P + P S
Sbjct: 280 ANQLMAFNHLIPGAFPPTAM-PALPTYQLSETSYQPTSIPQAVSDPSNTVHRPQPLPPSS 338
>UNIPROTKB|G1K361 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AADN02033985
EMBL:AADN02033987 EMBL:AADN02033986 ProteinModelPortal:G1K361
Ensembl:ENSGALT00000033836 Uniprot:G1K361
Length = 214
Score = 153 (58.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNR 145
>UNIPROTKB|O93582 [details] [associations]
symbol:Alx-4 "Paired type homeodomain protein" species:9031
"Gallus gallus" [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048565 "digestive
tract development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0071837 "HMG box domain binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0042981 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 CTD:60529
HOVERGEN:HBG004214 KO:K09451 eggNOG:NOG309608 OMA:KFQPQPS
OrthoDB:EOG4ZGPCG HSSP:P06601 EMBL:AADN02033349 EMBL:AADN02033350
EMBL:AADN02033351 EMBL:AADN02033352 EMBL:AF092538 IPI:IPI00588188
RefSeq:NP_989493.1 UniGene:Gga.934 SMR:O93582 STRING:O93582
Ensembl:ENSGALT00000013020 GeneID:373976 KEGG:gga:373976
InParanoid:O93582 NextBio:20813505 Uniprot:O93582
Length = 387
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 78 EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ +++D+ S P AD +S +RNRT+FT+ Q++ LEK F++THYPDV+AR
Sbjct: 169 QDRASTDLPS-PMDKADSESNKGKK-----RRNRTTFTSYQLEELEKVFQKTHYPDVYAR 222
Query: 138 ERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVYDKLRMFN----G 190
E+LA + L EAR+QV NR + ++ QQ H T+ + R N
Sbjct: 223 EQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQ 282
Query: 191 QPGWAWYPGSTPTPSPAHLALPHNP 215
P W G+ +P PA +P P
Sbjct: 283 NPSWIGNNGAA-SPVPA-CVVPCEP 305
>FB|FBgn0085369 [details] [associations]
symbol:CG34340 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:AE014134 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048813 GO:GO:0007517
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
RefSeq:NP_001097075.2 UniGene:Dm.12203 ProteinModelPortal:A8DYQ2
SMR:A8DYQ2 GeneID:5740176 KEGG:dme:Dmel_CG34340 FlyBase:FBgn0085369
InParanoid:A8DYQ2 OrthoDB:EOG4NGF3W PhylomeDB:A8DYQ2
GenomeRNAi:5740176 NextBio:20891216 Bgee:A8DYQ2 Uniprot:A8DYQ2
Length = 607
Score = 170 (64.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 39/80 (48%), Positives = 51/80 (63%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ- 166
+RNRT+FT +Q++ LE F +THYPDVF RE LA KI L EAR+QV NR + A+
Sbjct: 73 RRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAER 132
Query: 167 -KEQQASAHNQTSETVYDKL 185
K++Q N S + DKL
Sbjct: 133 LKDEQRKRENGESSSSLDKL 152
Score = 121 (47.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 30/62 (48%), Positives = 37/62 (59%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ--KEQQASAHNQTSETVYD 286
F +THYPDVF RE LA KI L EAR+QV NR + A+ K++Q N S + D
Sbjct: 91 FAQTHYPDVFTREDLAMKINLTEARVQVWFQNRRAKWRKAERLKDEQRKRENGESSSSLD 150
Query: 287 KL 288
KL
Sbjct: 151 KL 152
Score = 42 (19.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 200 STPTPSPAHLA-LPHN 214
STPTP+ H +PH+
Sbjct: 302 STPTPTTPHAPQMPHS 317
Score = 42 (19.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 303 STPTPSPAHLA-LPHN 317
STPTP+ H +PH+
Sbjct: 302 STPTPTTPHAPQMPHS 317
>UNIPROTKB|F1S3F6 [details] [associations]
symbol:VSX2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060040 "retinal bipolar neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005737 GO:GO:0008285 GO:GO:0005730
GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 GO:GO:0045165
GO:GO:0060040 InterPro:IPR023339 PROSITE:PS51496 OMA:FSKPEYQ
EMBL:CU463324 Ensembl:ENSSSCT00000002627 Uniprot:F1S3F6
Length = 377
Score = 130 (50.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 36/95 (37%), Positives = 50/95 (52%)
Query: 70 PISRDDAK-EHESTSDINSEPNSSADED---SQMXXXXXXXXQRNRTS--FTNEQIDSLE 123
P+ R + T+ +SE SS+D S + +R+R + ++ Q++ LE
Sbjct: 121 PLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRRTGHLSSYQLEELE 180
Query: 124 KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
K F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 181 KAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNR 215
Score = 79 (32.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
QVWF NRRAKWR+ EK
Sbjct: 209 QVWFQNRRAKWRKREK 224
>UNIPROTKB|E2RLA0 [details] [associations]
symbol:ALX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048565 "digestive tract development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0042981 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009791 GO:GO:0001942
GO:GO:0007517 GO:GO:0035116 GO:GO:0035115 GO:GO:0048704
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 CTD:60529 KO:K09451 OMA:KFQPQPS
GO:GO:0048565 GO:GO:0042733 EMBL:AAEX03011521 RefSeq:XP_850737.1
Ensembl:ENSCAFT00000015028 GeneID:609979 KEGG:cfa:609979
NextBio:20895553 Uniprot:E2RLA0
Length = 414
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 50/145 (34%), Positives = 76/145 (52%)
Query: 78 EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ +++D+ S P AD +S +RNRT+FT+ Q++ LEK F++THYPDV+AR
Sbjct: 194 QDRASADLPS-PLEKADSESNKGKK-----RRNRTTFTSYQLEELEKVFQKTHYPDVYAR 247
Query: 138 ERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVYDKLRMFN----G 190
E+LA + L EAR+QV NR + ++ QQ H T+ + R N
Sbjct: 248 EQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQ 307
Query: 191 QPGWAWYPGSTPTPSPAHLALPHNP 215
P W G+ +P PA +P +P
Sbjct: 308 NPSWIGNNGAA-SPVPA-CVVPCDP 330
>UNIPROTKB|Q9PT61 [details] [associations]
symbol:otx5-b "Homeobox protein otx5-B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0042706 "eye photoreceptor cell fate commitment" evidence=IMP]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR001356 InterPro:IPR003025 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PRINTS:PR01255 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOVERGEN:HBG004028 HSSP:P06601 GO:GO:0045872 GO:GO:0042706
EMBL:AJ251846 EMBL:BC077545 RefSeq:NP_001081916.1 UniGene:Xl.511
ProteinModelPortal:Q9PT61 SMR:Q9PT61 GeneID:398118 KEGG:xla:398118
CTD:398118 Xenbase:XB-GENE-865179 Uniprot:Q9PT61
Length = 290
Score = 162 (62.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/121 (35%), Positives = 63/121 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGW-AWY----PGSTPTPSPAHLALPH--NPGSVTP 220
+ A + ++ R N + Y PG+ TPS + A +P S++P
Sbjct: 99 QSTGQAKPRPAKKKTSPARETNSEASTNGQYSPPPPGTAVTPSSSASATVSIWSPASISP 158
Query: 221 I 221
I
Sbjct: 159 I 159
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 34/103 (33%), Positives = 51/103 (49%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F +T YPD+F RE +A KI LPE+R+QV NR + Q++ A + ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQAKPRPAKKKTSPA 116
Query: 289 RMFNGQPGW-AWY----PGSTPTPSPAHLALPH--NPGSVTPI 324
R N + Y PG+ TPS + A +P S++PI
Sbjct: 117 RETNSEASTNGQYSPPPPGTAVTPSSSASATVSIWSPASISPI 159
>UNIPROTKB|I3LJL6 [details] [associations]
symbol:I3LJL6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 Ensembl:ENSSSCT00000023687 OMA:SHAFEAV
Uniprot:I3LJL6
Length = 348
Score = 134 (52.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 89 PNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPE 148
P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + E
Sbjct: 140 PLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLARRGDSVE 199
Query: 149 ARIQVSSINR 158
A ++V NR
Sbjct: 200 APLEVWFQNR 209
Score = 73 (30.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 339 QVWFSNRRAKWRREEK 354
+VWF NRRAKWR+ E+
Sbjct: 203 EVWFQNRRAKWRKRER 218
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 189 NGQPGWAWYPGSTPTPSPAHLALPHNPGSV 218
+G PG PSP PH+ G+V
Sbjct: 257 SGSPGGPCLVSPEGIPSPCMSPYPHSHGNV 286
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 292 NGQPGWAWYPGSTPTPSPAHLALPHNPGSV 321
+G PG PSP PH+ G+V
Sbjct: 257 SGSPGGPCLVSPEGIPSPCMSPYPHSHGNV 286
>UNIPROTKB|E1BA64 [details] [associations]
symbol:ALX4 "Homeobox protein aristaless-like 4"
species:9913 "Bos taurus" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048565 "digestive tract development" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104013 UniGene:Bt.47446
EMBL:DAAA02041507 EMBL:DAAA02041508 EMBL:DAAA02041509
EMBL:DAAA02041510 IPI:IPI01001526 Ensembl:ENSBTAT00000047360
Uniprot:E1BA64
Length = 246
Score = 158 (60.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 34/76 (44%), Positives = 51/76 (67%)
Query: 78 EHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
+ +++D+ S P AD +S +RNRT+FT+ Q++ LEK F++THYPDV+AR
Sbjct: 177 QDRASADLPS-PMEKADSESNKGKK-----RRNRTTFTSYQLEELEKVFQKTHYPDVYAR 230
Query: 138 ERLADKIGLPEARIQV 153
E+LA + L EAR+QV
Sbjct: 231 EQLAMRTDLTEARVQV 246
>UNIPROTKB|F1MR77 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048589 "developmental growth" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008343
"adult feeding behavior" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:DAAA02008995 IPI:IPI00700903 UniGene:Bt.106532
Ensembl:ENSBTAT00000012679 NextBio:20878789 Uniprot:F1MR77
Length = 379
Score = 164 (62.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 48/133 (36%), Positives = 68/133 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR------ 161
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 72 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 131
Query: 162 -----NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L QKE + S +E ++ QP P P P+ HL+L
Sbjct: 132 SLQKEQLQKQKEAEGSHGEGKTEAPTPDTQLETDQP--PNLPSGDP-PAELHLSLSEQSA 188
Query: 217 SVT-PISRDDAKE 228
S + P + D +E
Sbjct: 189 SESAPEDQPDREE 201
>FB|FBgn0034821 [details] [associations]
symbol:CG9876 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:P06601 eggNOG:NOG309174
EMBL:BT009975 ProteinModelPortal:Q7YU61 SMR:Q7YU61 PRIDE:Q7YU61
FlyBase:FBgn0034821 InParanoid:Q7YU61 OrthoDB:EOG4NCJWH
ArrayExpress:Q7YU61 Bgee:Q7YU61 Uniprot:Q7YU61
Length = 275
Score = 160 (61.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 45/113 (39%), Positives = 61/113 (53%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F++ Q+ +LEK FERTHYPD F RE LA K+ L EAR+QV NR R A +
Sbjct: 118 RRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNR--R--AKFR 173
Query: 168 EQQASAHNQTSETVYDKL---RMFNGQPGWAW--YPGSTPTPSPAHLALPHNP 215
+ S ++T +L + N +A +P P P P AL P
Sbjct: 174 RNERSVGSRTLLDTAPQLVPAPISNNMHKYANIPHPHPQPPPPPGAYALNFGP 226
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 37/97 (38%), Positives = 47/97 (48%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
K FERTHYPD F RE LA K+ L EAR+QV NR R A + + S ++T
Sbjct: 134 KVFERTHYPDAFVREELATKVHLSEARVQVWFQNR--R--AKFRRNERSVGSRTLLDTAP 189
Query: 287 KL---RMFNGQPGWAW--YPGSTPTPSPAHLALPHNP 318
+L + N +A +P P P P AL P
Sbjct: 190 QLVPAPISNNMHKYANIPHPHPQPPPPPGAYALNFGP 226
>UNIPROTKB|E1C639 [details] [associations]
symbol:Gga.30007 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02006258 IPI:IPI00598714 Ensembl:ENSGALT00000020505
OMA:WRKHEKF Uniprot:E1C639
Length = 160
Score = 143 (55.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
+R RT+FT EQ+ LEK F+ THYPDV R +LA KI LPEAR+Q+
Sbjct: 83 RRIRTTFTAEQLQELEKIFQVTHYPDVHIRNQLAAKINLPEARVQI 128
>UNIPROTKB|Q28EM7 [details] [associations]
symbol:otx5 "Homeobox protein otx5" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0042706 "eye photoreceptor cell fate commitment"
evidence=ISS] [GO:0045872 "positive regulation of rhodopsin gene
expression" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0009952
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:1406 HOGENOM:HOG000082677
HOVERGEN:HBG004028 eggNOG:NOG245767 GO:GO:0045872 GO:GO:0042706
EMBL:CR848167 RefSeq:NP_001016021.1 UniGene:Str.2944
ProteinModelPortal:Q28EM7 SMR:Q28EM7 STRING:Q28EM7 GeneID:548775
KEGG:xtr:548775 Xenbase:XB-GENE-478452 Uniprot:Q28EM7
Length = 290
Score = 160 (61.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 43/121 (35%), Positives = 62/121 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGW-AWY----PGSTPTPSPAHLALPH--NPGSVTP 220
+ A + ++ R N + Y PG+ TPS A +P S++P
Sbjct: 99 QSTGQAKPRPAKKKTSPARETNSEASTNGQYSPPPPGTAVTPSSTASATVSIWSPASISP 158
Query: 221 I 221
I
Sbjct: 159 I 159
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F +T YPD+F RE +A KI LPE+R+QV NR + Q++ A + ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQAKPRPAKKKTSPA 116
Query: 289 RMFNGQPGW-AWY----PGSTPTPSPAHLALPH--NPGSVTPI 324
R N + Y PG+ TPS A +P S++PI
Sbjct: 117 RETNSEASTNGQYSPPPPGTAVTPSSTASATVSIWSPASISPI 159
>UNIPROTKB|F1PL78 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
EMBL:AAEX03009771 Ensembl:ENSCAFT00000006786 Uniprot:F1PL78
Length = 379
Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 49/141 (34%), Positives = 74/141 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--------- 158
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 73 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 132
Query: 159 VLRNLAAQKEQQAS-AHNQTS-ETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L+ QK+++A +H ++ E ++ QP P P P+ HL+L
Sbjct: 133 SLQKEQLQKQKEAEGSHGESKPEAPTPDTQLETEQP--PSLPSGDP-PADLHLSLSEQSA 189
Query: 217 SVT-PISRDDAKEFERTHYPD 236
S + P + + +E R D
Sbjct: 190 SESAPEDQPEREEDPRVGAED 210
>RGD|1308265 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA;ISO] [GO:0008344
"adult locomotory behavior" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:1308265 GO:GO:0007420
GO:GO:0043565 GO:GO:0008344 GO:GO:0008343 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122
GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 OrthoDB:EOG4BCDNN IPI:IPI00764573
Ensembl:ENSRNOT00000057055 UCSC:RGD:1308265 Uniprot:D3ZMA3
Length = 381
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 50/140 (35%), Positives = 69/140 (49%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR------ 161
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 72 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 131
Query: 162 -----NLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L QKE + S ET ++ QP P P P+ L+L
Sbjct: 132 SLQKEQLQKQKEAEGSHGEGKMETPASNTQLEAEQP--PSLPSGDP-PAELQLSLSEQSA 188
Query: 217 SVT-PISRDDAKEFERTHYP 235
S + P + D +E R P
Sbjct: 189 SESAPEDQLDREEDSRAEEP 208
>UNIPROTKB|Q9TTD8 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9615 "Canis lupus familiaris" [GO:0060126 "somatotropin
secreting cell differentiation" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0043066 GO:GO:0016477 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0001568
GO:GO:0009953 GO:GO:0060070 GeneTree:ENSGT00700000104273
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 EMBL:AF126157 RefSeq:NP_001018643.1 UniGene:Cfa.24675
ProteinModelPortal:Q9TTD8 SMR:Q9TTD8 Ensembl:ENSCAFT00000000419
GeneID:474647 KEGG:cfa:474647 InParanoid:Q9TTD8 OMA:TCFPHPY
NextBio:20850629 Uniprot:Q9TTD8
Length = 226
Score = 154 (59.3 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 47/127 (37%), Positives = 59/127 (46%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+F Q++ LE F R YPD++ARE LA GL EARIQV NR R A Q+
Sbjct: 70 RRHRTTFNPGQLEQLETAFGRNQYPDIWAREGLARDTGLSEARIQVWFQNR--R--AKQR 125
Query: 168 EQQASAHNQTSETVYDKLRMFNG-QPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDA 226
+Q+ S + F+G P P S PTP P PH P
Sbjct: 126 KQERSLLQPLAHL---SPATFSGFLPESPACPYSYPTPPPPMTCFPHPYNHALPSQPSTG 182
Query: 227 KEFERTH 233
F R H
Sbjct: 183 GSFARPH 189
Score = 114 (45.2 bits), Expect = 0.00033, P = 0.00033
Identities = 41/130 (31%), Positives = 53/130 (40%)
Query: 214 NPGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQ 273
NPG + + F R YPD++ARE LA GL EARIQV NR R A Q++Q+
Sbjct: 77 NPGQLEQLET----AFGRNQYPDIWAREGLARDTGLSEARIQVWFQNR--R--AKQRKQE 128
Query: 274 ASAHNQTSETVYDKLRMFNG-QPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAKGL 332
S + F+G P P S PTP P PH P
Sbjct: 129 RSLLQPLAHL---SPATFSGFLPESPACPYSYPTPPPPMTCFPHPYNHALPSQPSTGGSF 185
Query: 333 VQQSARQVWF 342
+ + W+
Sbjct: 186 ARPHQSEDWY 195
>UNIPROTKB|H0YMR3 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:BX004827
HGNC:HGNC:10853 ProteinModelPortal:H0YMR3 SMR:H0YMR3
Ensembl:ENST00000560001 Bgee:H0YMR3 Uniprot:H0YMR3
Length = 279
Score = 159 (61.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/91 (42%), Positives = 53/91 (58%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 99 EKREDVKSE-----DEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
L+ ++GL EAR+QV NR R ++E Q
Sbjct: 150 LSQRLGLSEARVQVWFQNR--RAKCRKQENQ 178
>UNIPROTKB|G3X7M1 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 CTD:6473
OMA:SNHCPVH EMBL:DAAA02005893 RefSeq:NP_001178475.1
UniGene:Bt.106108 Ensembl:ENSBTAT00000038279 GeneID:615159
KEGG:bta:615159 NextBio:20899478 Uniprot:G3X7M1
Length = 306
Score = 160 (61.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 38/84 (45%), Positives = 52/84 (61%)
Query: 92 SADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARI 151
S DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+
Sbjct: 108 SEDEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARV 163
Query: 152 QVSSINRVLRNLAAQKEQQASAHN 175
QV NR R A ++Q+ HN
Sbjct: 164 QVWFQNR--R--AKCRKQENQMHN 183
>UNIPROTKB|J9NS81 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
OMA:PDTQLDT EMBL:AAEX03009771 Ensembl:ENSCAFT00000047515
Uniprot:J9NS81
Length = 414
Score = 163 (62.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 49/141 (34%), Positives = 74/141 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--------- 158
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 108 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 167
Query: 159 VLRNLAAQKEQQAS-AHNQTS-ETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L+ QK+++A +H ++ E ++ QP P P P+ HL+L
Sbjct: 168 SLQKEQLQKQKEAEGSHGESKPEAPTPDTQLETEQP--PSLPSGDP-PADLHLSLSEQSA 224
Query: 217 SVT-PISRDDAKEFERTHYPD 236
S + P + + +E R D
Sbjct: 225 SESAPEDQPEREEDPRVGAED 245
>ZFIN|ZDB-GENE-090313-51 [details] [associations]
symbol:phox2ba "paired-like homeobox 2ba"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-090313-51 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104256 eggNOG:NOG301263 EMBL:BX323984
IPI:IPI00923759 RefSeq:NP_001139175.1 UniGene:Dr.161702
Ensembl:ENSDART00000110517 Ensembl:ENSDART00000141795 GeneID:795258
CTD:795258 HOVERGEN:HBG106787 OMA:SWNESSS NextBio:20932169
Uniprot:B8A4X8
Length = 155
Score = 142 (55.0 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT FT+ Q+ +LE+ F T YPD++ RE L +I L EAR+QV NR + +K
Sbjct: 14 RRVRTIFTSAQLKALERAFAHTQYPDIYTREELVQEIQLTEARVQVWFQNRRAK---FRK 70
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
+++A++ N++S + + + A P ST P
Sbjct: 71 QERAASWNESSSKTHSSPSHDSSETASATDPDSTQPSLP 109
Score = 104 (41.7 bits), Expect = 0.00078, P = 0.00078
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
+ F T YPD++ RE L +I L EAR+QV NR + +K+++A++ N++S +
Sbjct: 30 RAFAHTQYPDIYTREELVQEIQLTEARVQVWFQNRRAK---FRKQERAASWNESSSKTHS 86
Query: 287 KLRMFNGQPGWAWYPGSTPTPSP 309
+ + A P ST P
Sbjct: 87 SPSHDSSETASATDPDSTQPSLP 109
>FB|FBgn0000625 [details] [associations]
symbol:eyg "eyegone" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0005667 "transcription factor
complex" evidence=ISS] [GO:0007435 "salivary gland morphogenesis"
evidence=TAS] [GO:0001654 "eye development" evidence=IMP]
[GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007477 "notum development"
evidence=IMP] [GO:0007469 "antennal development" evidence=IMP]
[GO:0048749 "compound eye development" evidence=IMP] [GO:0035214
"eye-antennal disc development" evidence=IMP] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF00292 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 GO:GO:0005634
GO:GO:0007435 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0000977 GO:GO:0001745 GO:GO:0007469 GO:GO:0007477
FlyBase:FBgn0000625 EMBL:BT021470 ProteinModelPortal:Q5BHV4
STRING:Q5BHV4 PRIDE:Q5BHV4 InParanoid:Q5BHV4 ArrayExpress:Q5BHV4
Bgee:Q5BHV4 Uniprot:Q5BHV4
Length = 675
Score = 156 (60.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 53/174 (30%), Positives = 80/174 (45%)
Query: 48 PGSTXXXXXXXXXXXXXXGSVTPISRDDAKEHESTSDINS-EPNSSADEDSQMXXXXXXX 106
P ST G TP +R + S + S + N D D +
Sbjct: 295 PVSTCGSLSSAHLMAGGAGG-TPTNRAISPGSGSHDTLESADENRHIDSD-YLDDDDEPK 352
Query: 107 XQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQ 166
+RNRT+F+ EQ++ LEKEF+++HYP V RERL+ + L EAR+QV NR + +
Sbjct: 353 FRRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAK---WR 409
Query: 167 KEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 220
+ Q+ + + + + L + Q A P S+PTPS A P + P
Sbjct: 410 RHQRMNLLKRQRSSPANPLH--SQQSNDA--PASSPTPSNHSSASTSAPVAPVP 459
Score = 100 (40.3 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 286
KEF+++HYP V RERL+ + L EAR+QV NR + ++ Q+ + + + +
Sbjct: 370 KEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAK---WRRHQRMNLLKRQRSSPAN 426
Query: 287 KLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 323
L + Q A P S+PTPS A P + P
Sbjct: 427 PLH--SQQSNDA--PASSPTPSNHSSASTSAPVAPVP 459
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 124 KEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQK 167
++++R + P +FA RERL + A VSSINR+LRN AA++
Sbjct: 182 EQYKREN-PTIFAWEIRERLISEGVCTNATAPSVSSINRILRNRAAER 228
Score = 55 (24.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 3 VSSINRVLRNLAAQK 17
VSSINR+LRN AA++
Sbjct: 214 VSSINRILRNRAAER 228
>UNIPROTKB|Q9PVM0 [details] [associations]
symbol:otx5-a "Homeobox protein otx5-A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS;IMP]
[GO:0042706 "eye photoreceptor cell fate commitment" evidence=ISS]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR001356 InterPro:IPR003025 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PRINTS:PR01255 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0009952 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOVERGEN:HBG004028 HSSP:P06601 GO:GO:0045872 GO:GO:0042706
EMBL:AB034702 EMBL:BC084194 RefSeq:NP_001079119.1 UniGene:Xl.42160
ProteinModelPortal:Q9PVM0 SMR:Q9PVM0 GeneID:373653 KEGG:xla:373653
CTD:373653 Xenbase:XB-GENE-6252876 Uniprot:Q9PVM0
Length = 290
Score = 159 (61.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 43/121 (35%), Positives = 62/121 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR + Q+
Sbjct: 39 RRERTTFTRAQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQ 98
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGW-AWY----PGSTPTPSPAHLALPH--NPGSVTP 220
+ A + ++ R N + Y PG+ TPS A +P S++P
Sbjct: 99 QSTGQAKPRPAKKKTSPARETNSEASTNGQYSPPPPGTAVTPSSTAGATVSIWSPASISP 158
Query: 221 I 221
I
Sbjct: 159 I 159
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F +T YPD+F RE +A KI LPE+R+QV NR + Q++ A + ++
Sbjct: 57 FAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSTGQAKPRPAKKKTSPA 116
Query: 289 RMFNGQPGW-AWY----PGSTPTPSPAHLALPH--NPGSVTPI 324
R N + Y PG+ TPS A +P S++PI
Sbjct: 117 RETNSEASTNGQYSPPPPGTAVTPSSTAGATVSIWSPASISPI 159
>UNIPROTKB|F1Q361 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 OMA:SNHCPVH
EMBL:AAEX03026084 Ensembl:ENSCAFT00000017459 Uniprot:F1Q361
Length = 291
Score = 159 (61.0 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 39/91 (42%), Positives = 53/91 (58%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 98 EKREDVKSE-----DEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 148
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
L+ ++GL EAR+QV NR R ++E Q
Sbjct: 149 LSQRLGLSEARVQVWFQNR--RAKCRKQENQ 177
>UNIPROTKB|O15266 [details] [associations]
symbol:SHOX "Short stature homeobox protein" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0001501 "skeletal system development" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006366 GO:GO:0001501 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976
Orphanet:137693 eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331
OrthoDB:EOG41C6X2 EMBL:Y11536 EMBL:Y11535 EMBL:U82668 EMBL:U89331
EMBL:BX004827 IPI:IPI00005744 IPI:IPI00411417 RefSeq:NP_000442.1
RefSeq:NP_006874.1 UniGene:Hs.105932 ProteinModelPortal:O15266
SMR:O15266 IntAct:O15266 STRING:O15266 PhosphoSite:O15266
PRIDE:O15266 DNASU:6473 Ensembl:ENST00000334060
Ensembl:ENST00000381575 Ensembl:ENST00000381578
Ensembl:ENST00000554971 GeneID:6473 KEGG:hsa:6473 UCSC:uc004cph.1
UCSC:uc004cpi.3 CTD:6473 GeneCards:GC0XP000585 HGNC:HGNC:10853
MIM:127300 MIM:249700 MIM:300582 MIM:312865 MIM:400020
neXtProt:NX_O15266 Orphanet:2632 Orphanet:240 PharmGKB:PA134978644
InParanoid:O15266 OMA:SNHCPVH PhylomeDB:O15266 GenomeRNAi:6473
NextBio:25145 Bgee:O15266 CleanEx:HS_SHOX Genevestigator:O15266
Uniprot:O15266
Length = 292
Score = 159 (61.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 39/91 (42%), Positives = 53/91 (58%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 99 EKREDVKSE-----DEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 149
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQQ 170
L+ ++GL EAR+QV NR R ++E Q
Sbjct: 150 LSQRLGLSEARVQVWFQNR--RAKCRKQENQ 178
>UNIPROTKB|Q9Y2V3 [details] [associations]
symbol:RAX "Retinal homeobox protein Rx" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0021854 "hypothalamus development" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007601 "visual perception" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0007601 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0007389 GO:GO:0060173 eggNOG:NOG261733
GO:GO:0021854 Orphanet:2542 EMBL:AC067859 CleanEx:HS_RAX
HOVERGEN:HBG021349 OrthoDB:EOG4V4387 CTD:30062 KO:K09332
EMBL:AF115392 IPI:IPI00021025 RefSeq:NP_038463.2 UniGene:Hs.278957
ProteinModelPortal:Q9Y2V3 SMR:Q9Y2V3 STRING:Q9Y2V3
PhosphoSite:Q9Y2V3 DMDM:296452886 PaxDb:Q9Y2V3 PRIDE:Q9Y2V3
DNASU:30062 Ensembl:ENST00000334889 GeneID:30062 KEGG:hsa:30062
UCSC:uc002lhx.3 GeneCards:GC18M056909 H-InvDB:HIX0202674
HGNC:HGNC:18662 MIM:601881 MIM:611038 neXtProt:NX_Q9Y2V3
PharmGKB:PA38626 InParanoid:Q9Y2V3 OMA:CGPGFGD PhylomeDB:Q9Y2V3
ChiTaRS:RAX GenomeRNAi:30062 NextBio:52852 ArrayExpress:Q9Y2V3
Bgee:Q9Y2V3 Genevestigator:Q9Y2V3 GermOnline:ENSG00000134438
Uniprot:Q9Y2V3
Length = 346
Score = 161 (61.7 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K
Sbjct: 137 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEK 196
Query: 168 EQQASAHNQTS 178
+ +S Q S
Sbjct: 197 LEVSSMKLQDS 207
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTS 281
+ FE++HYPDV++RE LA K+ LPE R+QV NR + +K + +S Q S
Sbjct: 153 RAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWRRQEKLEVSSMKLQDS 207
>RGD|628616 [details] [associations]
symbol:Prrxl1 "paired related homeobox protein-like 1"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=ISO] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0009593 "detection of chemical stimulus"
evidence=IEA;ISO] [GO:0016048 "detection of temperature stimulus"
evidence=IEA;ISO] [GO:0021516 "dorsal spinal cord development"
evidence=IEA;ISO] [GO:0021559 "trigeminal nerve development"
evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0050954 "sensory perception of mechanical
stimulus" evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
Uniprot:Q62798
Length = 263
Score = 157 (60.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 34 RRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 94 GASDQEPGAKEPMAEVTPPPVRNINSPP 121
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 111
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 112 PPVRNINSPP 121
>UNIPROTKB|Q62798 [details] [associations]
symbol:Drgx "Dorsal root ganglia homeobox protein"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 EMBL:U29174 RGD:628616 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0021559
GO:GO:0021516 eggNOG:NOG39948 HOVERGEN:HBG106743 OrthoDB:EOG49CQ88
CTD:107751 GO:GO:0009593 GO:GO:0016048 GO:GO:0050954
IPI:IPI00208300 RefSeq:NP_665710.1 UniGene:Rn.10189
ProteinModelPortal:Q62798 SMR:Q62798 PhosphoSite:Q62798
GeneID:252880 KEGG:rno:252880 UCSC:RGD:628616 InParanoid:Q62798
NextBio:623960 Genevestigator:Q62798 GermOnline:ENSRNOG00000020045
Uniprot:Q62798
Length = 263
Score = 157 (60.3 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR + ++
Sbjct: 34 RRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTER 93
Query: 168 ---EQQASAHNQTSETVYDKLRMFNGQP 192
+Q+ A +E +R N P
Sbjct: 94 GASDQEPGAKEPMAEVTPPPVRNINSPP 121
Score = 113 (44.8 bits), Expect = 0.00064, P = 0.00064
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSETVY 285
F +THYPDVF RE LA KI L EAR+QV NR + ++ +Q+ A +E
Sbjct: 52 FAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTP 111
Query: 286 DKLRMFNGQP 295
+R N P
Sbjct: 112 PPVRNINSPP 121
>MGI|MGI:108359 [details] [associations]
symbol:Alx4 "aristaless-like homeobox 4" species:10090 "Mus
musculus" [GO:0001942 "hair follicle development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA;IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IGI]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0035108 "limb morphogenesis" evidence=IGI;IMP] [GO:0035115
"embryonic forelimb morphogenesis" evidence=IGI] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IGI] [GO:0042733
"embryonic digit morphogenesis" evidence=IGI;IMP] [GO:0042981
"regulation of apoptotic process" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048565 "digestive tract development"
evidence=IMP] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IGI;IMP] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0060021 "palate development" evidence=IGI]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:108359 GO:GO:0042981 GO:GO:0009952 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009791 GO:GO:0001942
GO:GO:0007517 GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518
GO:GO:0048704 GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104013 CTD:60529
HOVERGEN:HBG004214 KO:K09451 eggNOG:NOG309608 OMA:KFQPQPS
OrthoDB:EOG4ZGPCG GO:GO:0048565 GO:GO:0042733 EMBL:AF001465
IPI:IPI00127559 PIR:JC6522 RefSeq:NP_031468.1 UniGene:Mm.389389
ProteinModelPortal:O35137 SMR:O35137 STRING:O35137
PhosphoSite:O35137 PRIDE:O35137 Ensembl:ENSMUST00000042078
GeneID:11695 KEGG:mmu:11695 InParanoid:O35137 NextBio:279357
Bgee:O35137 CleanEx:MM_ALX4 Genevestigator:O35137
GermOnline:ENSMUSG00000040310 Uniprot:O35137
Length = 399
Score = 162 (62.1 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 44/115 (38%), Positives = 64/115 (55%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QV NR + ++
Sbjct: 203 RRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRER 262
Query: 168 ---EQQASAHNQTSETVYDKLRMFN----GQPGWAWYPGSTPTPSPAHLALPHNP 215
QQ H T+ + R N P W G+ +P PA +P +P
Sbjct: 263 FGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAA-SPVPA-CVVPCDP 315
Score = 111 (44.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 35/99 (35%), Positives = 50/99 (50%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK---EQQASAHNQTSET 283
K F++THYPDV+ARE+LA + L EAR+QV NR + ++ QQ H T+
Sbjct: 219 KVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYE 278
Query: 284 VYDKLRMFN----GQPGWAWYPGSTPTPSPAHLALPHNP 318
+ R N P W G+ +P PA +P +P
Sbjct: 279 LPLLTRAENYAQIQNPSWIGNNGAA-SPVPA-CVVPCDP 315
Score = 49 (22.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 15/53 (28%), Positives = 20/53 (37%)
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 220
+Q +A ++S F QP P + P P PAHL L P
Sbjct: 70 QQDLAAPLESSSGARGSFNKFQPQPPTPQPPPAPPAP-PAHLYLQRGACKTPP 121
>UNIPROTKB|F1NMR6 [details] [associations]
symbol:F1NMR6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
EMBL:AADN02031232 EMBL:AADN02031233 IPI:IPI00823059
Ensembl:ENSGALT00000037450 Uniprot:F1NMR6
Length = 213
Score = 150 (57.9 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 43/107 (40%), Positives = 56/107 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLA- 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR R L
Sbjct: 96 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKLER 155
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGST----PTPSPA 207
A A+A N + D R + + P ST P P+PA
Sbjct: 156 AAAAAAAAAKNGAAGKKSDASRDDESKEAKSTDPDSTGGPGPNPNPA 202
Score = 111 (44.1 bits), Expect = 0.00060, P = 0.00060
Identities = 39/103 (37%), Positives = 48/103 (46%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR--VLRNLA-AQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR R L A
Sbjct: 100 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKLERAAAA 159
Query: 272 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGST----PTPSPA 310
A+A N + D R + + P ST P P+PA
Sbjct: 160 AAAAAKNGAAGKKSDASRDDESKEAKSTDPDSTGGPGPNPNPA 202
>UNIPROTKB|Q99811 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0030326
"embryonic limb morphogenesis" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0042474 "middle ear morphogenesis"
evidence=IEA] [GO:0045880 "positive regulation of smoothened
signaling pathway" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0000228 "nuclear chromosome" evidence=NAS] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0043565 EMBL:CH471090
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
EMBL:AL590369 GO:GO:0000228 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8
eggNOG:NOG309174 EMBL:AF061970 EMBL:BC014645 EMBL:U81600
IPI:IPI00018429 RefSeq:NP_057391.1 UniGene:Hs.660115
ProteinModelPortal:Q99811 SMR:Q99811 STRING:Q99811
PhosphoSite:Q99811 DMDM:12644475 PRIDE:Q99811
Ensembl:ENST00000372469 GeneID:51450 KEGG:hsa:51450 UCSC:uc004byh.3
CTD:51450 GeneCards:GC09P132427 HGNC:HGNC:21338 HPA:HPA026808
MIM:604675 neXtProt:NX_Q99811 PharmGKB:PA134871679
InParanoid:Q99811 OMA:GVSMANS PhylomeDB:Q99811 ChiTaRS:PRRX2
GenomeRNAi:51450 NextBio:55055 Bgee:Q99811 CleanEx:HS_PRRX2
Genevestigator:Q99811 GermOnline:ENSG00000167157 Uniprot:Q99811
Length = 253
Score = 156 (60.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 44/119 (36%), Positives = 61/119 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 105 RRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNER 164
Query: 168 EQQASAHNQTSETVYDKLRMFNGQP----GWAWYPG--STPTPSPAHLALPHNPGSVTP 220
AS ++ Y + QP A P S SP P++PGS P
Sbjct: 165 AMLASRSASLLKS-YSQEAAIE-QPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGP 221
>ZFIN|ZDB-GENE-051030-21 [details] [associations]
symbol:shox "short stature homeobox" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-051030-21 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976
GeneTree:ENSGT00700000104279 EMBL:BX294669 IPI:IPI00742503
Ensembl:ENSDART00000029238 ArrayExpress:F1Q5T6 Bgee:F1Q5T6
Uniprot:F1Q5T6
Length = 304
Score = 159 (61.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 37/83 (44%), Positives = 51/83 (61%)
Query: 88 EPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED+Q +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 94 EDVKSEDEDAQ----SKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 149
Query: 148 EARIQVSSINRVLRNLAAQKEQQ 170
EAR+QV NR R ++E Q
Sbjct: 150 EARVQVWFQNR--RAKCRKQENQ 170
>UNIPROTKB|J9P3P5 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 OMA:RWATAGM EMBL:AAEX03002130
Ensembl:ENSCAFT00000046395 Uniprot:J9P3P5
Length = 327
Score = 153 (58.9 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPSSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQV 153
L E+R+QV
Sbjct: 143 LTESRVQV 150
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 331 GLVQQSAR--QVWFSNRRAKWRREEKLRN 357
GL + + Q W RRAKW++ +K N
Sbjct: 142 GLTESRVQVFQSWC--RRAKWKKRKKTTN 168
>ZFIN|ZDB-GENE-070330-1 [details] [associations]
symbol:drgx "dorsal root ganglia homeobox"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-070330-1 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 HOVERGEN:HBG106743
CTD:644168 EMBL:AY753211 IPI:IPI00481333 RefSeq:NP_001032182.1
UniGene:Dr.94366 ProteinModelPortal:Q3BD88 SMR:Q3BD88 STRING:Q3BD88
GeneID:560399 KEGG:dre:560399 InParanoid:Q3BD88 NextBio:20883422
Uniprot:Q3BD88
Length = 287
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT +Q+++LE F +THYPDVFARE LA KI L EAR+QV NR
Sbjct: 43 RRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWFQNR 93
>UNIPROTKB|A2VE85 [details] [associations]
symbol:PRRX1 "Paired related homeobox 1" species:9913 "Bos
taurus" [GO:0071837 "HMG box domain binding" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0048844 "artery
morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:DAAA02042867 EMBL:DAAA02042868 EMBL:BC133623 IPI:IPI00717328
RefSeq:NP_001075208.1 UniGene:Bt.78963 SMR:A2VE85
Ensembl:ENSBTAT00000006003 GeneID:540901 KEGG:bta:540901
InParanoid:A2VE85 NextBio:20878904 Uniprot:A2VE85
Length = 245
Score = 155 (59.6 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>UNIPROTKB|E2RGD6 [details] [associations]
symbol:PRRX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071837 "HMG box domain binding"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048844
"artery morphogenesis" evidence=IEA] [GO:0048701 "embryonic cranial
skeleton morphogenesis" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IEA]
[GO:0042474 "middle ear morphogenesis" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 GO:GO:0060021 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844 GO:GO:0048701
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0045880
GO:GO:0042474 CTD:5396 KO:K09329 OMA:WGSAAPY EMBL:AAEX03005214
EMBL:AAEX03005215 RefSeq:XP_850725.1 ProteinModelPortal:E2RGD6
SMR:E2RGD6 Ensembl:ENSCAFT00000023797 GeneID:609105 KEGG:cfa:609105
NextBio:20894722 Uniprot:E2RGD6
Length = 245
Score = 155 (59.6 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>UNIPROTKB|P54821 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005730 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0003713 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GO:GO:0002053 GO:GO:0045880 GO:GO:0042474
eggNOG:NOG267226 CTD:5396 HOVERGEN:HBG021349 KO:K09329
OrthoDB:EOG4RR6J8 EMBL:AB451463 EMBL:Z97200 EMBL:BC074993
EMBL:M95929 IPI:IPI00008822 IPI:IPI00221036 RefSeq:NP_008833.1
RefSeq:NP_073207.1 UniGene:Hs.283416 ProteinModelPortal:P54821
SMR:P54821 STRING:P54821 PhosphoSite:P54821 DMDM:6174916
PRIDE:P54821 DNASU:5396 Ensembl:ENST00000239461
Ensembl:ENST00000367760 GeneID:5396 KEGG:hsa:5396 UCSC:uc001ghe.3
UCSC:uc001ghf.3 GeneCards:GC01P170632 HGNC:HGNC:9142 HPA:HPA051084
MIM:167420 MIM:202650 neXtProt:NX_P54821 Orphanet:990
PharmGKB:PA33466 InParanoid:P54821 OMA:WGSAAPY PhylomeDB:P54821
ChiTaRS:PRRX1 GenomeRNAi:5396 NextBio:20925 ArrayExpress:P54821
Bgee:P54821 CleanEx:HS_PRRX1 Genevestigator:P54821
GermOnline:ENSG00000116132 Uniprot:P54821
Length = 245
Score = 155 (59.6 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>MGI|MGI:97712 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030326 "embryonic limb morphogenesis" evidence=IGI]
[GO:0042472 "inner ear morphogenesis" evidence=IGI] [GO:0042474
"middle ear morphogenesis" evidence=IGI;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045880 "positive
regulation of smoothened signaling pathway" evidence=IGI]
[GO:0048701 "embryonic cranial skeleton morphogenesis"
evidence=IGI;IMP] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI;IMP] [GO:0048844 "artery morphogenesis"
evidence=IGI;IMP] [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0071837 "HMG box domain binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:97712 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0042472 GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518
GO:GO:0060021 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0048844 GO:GO:0048701 GeneTree:ENSGT00700000104279
GO:GO:0002053 GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
ChiTaRS:PRRX1 EMBL:L06502 EMBL:U03873 EMBL:X59725 EMBL:BC092372
IPI:IPI00118248 IPI:IPI00230653 PIR:I48902 PIR:S26076
RefSeq:NP_035257.1 RefSeq:NP_783617.2 UniGene:Mm.288642
ProteinModelPortal:P63013 SMR:P63013 IntAct:P63013 STRING:P63013
PhosphoSite:P63013 PRIDE:P63013 Ensembl:ENSMUST00000027878
Ensembl:ENSMUST00000075805 GeneID:18933 KEGG:mmu:18933
UCSC:uc007dhh.1 UCSC:uc007dhi.1 InParanoid:P63013 NextBio:295248
Bgee:P63013 CleanEx:MM_PRRX1 Genevestigator:P63013
GermOnline:ENSMUSG00000026586 Uniprot:P63013
Length = 245
Score = 155 (59.6 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>RGD|628884 [details] [associations]
symbol:Prrx1 "paired related homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=IEA;ISO] [GO:0042474 "middle ear
morphogenesis" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0048701
"embryonic cranial skeleton morphogenesis" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048844 "artery morphogenesis" evidence=IEA;ISO] [GO:0051216
"cartilage development" evidence=IEA;ISO] [GO:0060021 "palate
development" evidence=IEA;ISO] [GO:0071837 "HMG box domain binding"
evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:628884 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0042472
GO:GO:0030326 GO:GO:0051216 HOGENOM:HOG000231518 GO:GO:0060021
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0048844
GO:GO:0048701 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 GO:GO:0042474 eggNOG:NOG267226 CTD:5396
HOVERGEN:HBG021349 KO:K09329 OrthoDB:EOG4RR6J8 OMA:WGSAAPY
EMBL:S82911 IPI:IPI00198569 RefSeq:NP_722543.1 UniGene:Rn.203584
ProteinModelPortal:P63014 SMR:P63014 STRING:P63014
Ensembl:ENSRNOT00000004950 GeneID:266813 KEGG:rno:266813
UCSC:RGD:628884 InParanoid:P63014 NextBio:624741
ArrayExpress:P63014 Genevestigator:P63014
GermOnline:ENSRNOG00000003720 Uniprot:P63014
Length = 245
Score = 155 (59.6 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR + ++
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAK---FRR 151
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
++A N+ + L+ ++G P P P+P
Sbjct: 152 NERAMLANKNASL----LKSYSGDVTAVEQP-IVPRPAP 185
>UNIPROTKB|P0CJ85 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 2"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.714689 ProteinModelPortal:P0CJ85
SMR:P0CJ85 PhosphoSite:P0CJ85 Ensembl:ENST00000553702
Ensembl:ENST00000562745 GeneCards:GC04P191026 HGNC:HGNC:37267
neXtProt:NX_P0CJ85 ArrayExpress:P0CJ85 Uniprot:P0CJ85
Length = 424
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 43 (20.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>UNIPROTKB|P0CJ86 [details] [associations]
symbol:DUX4L3 "Double homeobox protein 4-like protein 3"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.723089 ProteinModelPortal:P0CJ86
SMR:P0CJ86 PhosphoSite:P0CJ86 Ensembl:ENST00000557656
Ensembl:ENST00000569113 GeneCards:GC04P191025 HGNC:HGNC:38688
neXtProt:NX_P0CJ86 ArrayExpress:P0CJ86 Uniprot:P0CJ86
Length = 424
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 43 (20.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>UNIPROTKB|P0CJ88 [details] [associations]
symbol:DUX4L5 "Double homeobox protein 4-like protein 5"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.714687 ProteinModelPortal:P0CJ88
SMR:P0CJ88 PhosphoSite:P0CJ88 Ensembl:ENST00000557283
Ensembl:ENST00000563535 GeneCards:GC04P191017 HGNC:HGNC:38689
neXtProt:NX_P0CJ88 ArrayExpress:P0CJ88 Uniprot:P0CJ88
Length = 424
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 43 (20.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>UNIPROTKB|P0CJ89 [details] [associations]
symbol:DUX4L6 "Double homeobox protein 4-like protein 6"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.723089 ProteinModelPortal:P0CJ89
SMR:P0CJ89 PhosphoSite:P0CJ89 Ensembl:ENST00000553722
Ensembl:ENST00000563106 GeneCards:GC04P191016 HGNC:HGNC:37265
neXtProt:NX_P0CJ89 ArrayExpress:P0CJ89 Uniprot:P0CJ89
Length = 424
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 43 (20.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>UNIPROTKB|P0CJ90 [details] [associations]
symbol:DUX4L7 "Double homeobox protein 4-like protein 7"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00908947 UniGene:Hs.714688 ProteinModelPortal:P0CJ90
SMR:P0CJ90 PhosphoSite:P0CJ90 Ensembl:ENST00000553820
Ensembl:ENST00000554906 Ensembl:ENST00000561772
Ensembl:ENST00000566160 GeneCards:GC04P190992 HGNC:HGNC:37266
neXtProt:NX_P0CJ90 ArrayExpress:P0CJ90 Bgee:P0CJ90 Uniprot:P0CJ90
Length = 424
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 43 (20.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>UNIPROTKB|Q9UBX2 [details] [associations]
symbol:DUX4 "Double homeobox protein 4" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 HSSP:P06601
UniGene:Hs.723089 UniGene:Hs.714687 eggNOG:NOG323819
HOVERGEN:HBG063255 EMBL:AF117653 EMBL:AY044051 IPI:IPI00965468
UniGene:Hs.553518 ProteinModelPortal:Q9UBX2 SMR:Q9UBX2
STRING:Q9UBX2 PhosphoSite:Q9UBX2 DMDM:74720085 PRIDE:Q9UBX2
Ensembl:ENST00000565211 Ensembl:ENST00000569241
GeneCards:GC04P191005 HGNC:HGNC:3082 MIM:158900 MIM:606009
neXtProt:NX_Q9UBX2 Orphanet:269 InParanoid:Q9UBX2
ArrayExpress:Q9UBX2 CleanEx:HS_DUX4 Genevestigator:Q9UBX2
GermOnline:ENSG00000075705 Uniprot:Q9UBX2
Length = 424
Score = 114 (45.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 43 (20.2 bits), Expect = 5.5e-09, Sum P(3) = 5.5e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
Score = 43 (20.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 193 GWAWYP--GSTPTPSPA 207
G AW P G+ P P PA
Sbjct: 320 GAAWEPQAGAAPPPQPA 336
>UNIPROTKB|F1PUR9 [details] [associations]
symbol:DUXA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 OMA:PGYATKQ
EMBL:AAEX03000701 Ensembl:ENSCAFT00000003829
GeneTree:ENSGT00610000085975 Uniprot:F1PUR9
Length = 163
Score = 126 (49.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
+ S+ + + SS D+D +R RTS+T+ Q+ +L + F YP + RE+
Sbjct: 73 QKKSEPDEDLESSQDQDYPEEEIPSREDRRCRTSYTSSQLHTLIEAFTNNPYPGIDTREQ 132
Query: 140 LADKIGLPEARIQVSSINRVLRNLAAQKEQ 169
LA +IG+PE+R+Q+ NR R +K +
Sbjct: 133 LAKEIGIPESRVQIWFQNRRSRFHVQRKRE 162
Score = 106 (42.4 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT FT +Q+ L K F++ YP ++RLA ++ E+RIQV NR R+ QK
Sbjct: 16 RRSRTKFTEDQLKILIKAFDQNPYPGYATKQRLALEVNAEESRIQVWFQNRRARH-QCQK 74
Query: 168 EQQASAHNQTSE 179
+ + ++S+
Sbjct: 75 KSEPDEDLESSQ 86
Score = 80 (33.2 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQ 272
F YP + RE+LA +IG+PE+R+Q+ NR R +K +
Sbjct: 119 FTNNPYPGIDTREQLAKEIGIPESRVQIWFQNRRSRFHVQRKRE 162
>ZFIN|ZDB-GENE-080917-54 [details] [associations]
symbol:pax7b "paired box gene 7b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-080917-54 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 KO:K09381 InterPro:IPR022106
Pfam:PF12360 HOGENOM:HOG000230939 OrthoDB:EOG4JM7PH
EMBL:CABZ01012260 EMBL:CABZ01012261 EMBL:CABZ01012262
EMBL:CABZ01012263 EMBL:CABZ01012264 EMBL:FJ792831 IPI:IPI00862888
RefSeq:NP_001139621.1 UniGene:Dr.134092 Ensembl:ENSDART00000129992
GeneID:566533 KEGG:dre:566533 CTD:566533 NextBio:20888238
Uniprot:C0M005
Length = 510
Score = 166 (63.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 73/244 (29%), Positives = 104/244 (42%)
Query: 93 ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 152
+D +S+ +R+RT+FT EQ++ LEK FERTHYPD++ RE LA + L EAR+Q
Sbjct: 209 SDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQ 268
Query: 153 VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQ-PGWAWYPGSTPTPSPAHLAL 211
V NR A+ +QA A NQ L FN PG + P PT P + L
Sbjct: 269 VWFSNR-----RARWRKQAGA-NQ--------LAAFNHLLPG-GFPPTGMPT-LPTY-QL 311
Query: 212 PHNPGSVTPISRDDAKEFERTHY--PDVFARERLADK----IGLPEARIQVSSINRVLRN 265
P + T + +D + R P + L+ GL R SS +
Sbjct: 312 PESSYPTTTLPQDVSGTVHRPQPLPPSTMHQGGLSSDSSSAYGLSSNRHSFSSYTDTFMS 371
Query: 266 LAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALP-HNPGSVTPI 324
+A N S V + + + A P + SP H +L NP S +
Sbjct: 372 QSASSNHMNPVSNGLSPQV---MSILSNPSAVAPQPQHEFSISPLHSSLEASNPISASCS 428
Query: 325 SRDD 328
R +
Sbjct: 429 QRSE 432
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 60/224 (26%), Positives = 92/224 (41%)
Query: 133 DVFARERLADKIGLPEARIQ-VSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR-MFNG 190
D ++ + D+ +P VSSI+RVLR +K+ + ++ +T K + +G
Sbjct: 139 DKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKDDEDDC-DKKDDTGEKKTKHSIDG 197
Query: 191 QPGWAWYPGS-TPTPSPAHLALPHNPG-SVTPISRDDAKE----FERTHYPDVFARERLA 244
G + S L L S T + + +E FERTHYPD++ RE LA
Sbjct: 198 ILGDKGRMDEVSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELA 257
Query: 245 DKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGST 304
+ L EAR+QV NR R Q +A N + M P + S
Sbjct: 258 QRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPT-LPTYQLPESSY 316
Query: 305 PTPS-PAHLA-LPHNPGSVTPISRDDAKGLVQQSARQVWFSNRR 346
PT + P ++ H P + P + GL S+ S+ R
Sbjct: 317 PTTTLPQDVSGTVHRPQPLPPSTMHQG-GLSSDSSSAYGLSSNR 359
Score = 39 (18.8 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 3 VSSINRVLRNLAAQKEQQ 20
VSSI+RVLR +K+ +
Sbjct: 160 VSSISRVLRARFGKKDDE 177
>UNIPROTKB|K7GS77 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
EMBL:FP015869 GeneID:100520816 RefSeq:XP_003134962.1
Ensembl:ENSSSCT00000035048 Uniprot:K7GS77
Length = 292
Score = 158 (60.7 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 37/83 (44%), Positives = 50/83 (60%)
Query: 88 EPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 102 EDVKSEDEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 157
Query: 148 EARIQVSSINRVLRNLAAQKEQQ 170
EAR+QV NR R ++E Q
Sbjct: 158 EARVQVWFQNR--RAKCRKQENQ 178
>UNIPROTKB|G3V243 [details] [associations]
symbol:RAX2 "Retina and anterior neural fold homeobox like
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CH471139 EMBL:AC005777
OMA:SFGPHAF UniGene:Hs.532691 HGNC:HGNC:18286
ProteinModelPortal:G3V243 SMR:G3V243 Ensembl:ENST00000555633
ArrayExpress:G3V243 Bgee:G3V243 Uniprot:G3V243
Length = 230
Score = 153 (58.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT Q+ LE+ FE +HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 74 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNR 124
>UNIPROTKB|F1SG33 [details] [associations]
symbol:LOC100520816 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GO:GO:0000976 GeneTree:ENSGT00700000104279 KO:K09331 OMA:SNHCPVH
EMBL:FP015869 RefSeq:XP_003134961.1 Ensembl:ENSSSCT00000013224
GeneID:100520816 KEGG:ssc:100520816 Uniprot:F1SG33
Length = 300
Score = 158 (60.7 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 37/83 (44%), Positives = 50/83 (60%)
Query: 88 EPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLP 147
E S DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL
Sbjct: 102 EDVKSEDEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLS 157
Query: 148 EARIQVSSINRVLRNLAAQKEQQ 170
EAR+QV NR R ++E Q
Sbjct: 158 EARVQVWFQNR--RAKCRKQENQ 178
>UNIPROTKB|O75360 [details] [associations]
symbol:PROP1 "Homeobox protein prophet of Pit-1"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001568 "blood
vessel development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0021979 "hypothalamus cell
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048850 "hypophysis morphogenesis" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0060126 "somatotropin secreting cell differentiation"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043066
GO:GO:0016477 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0001568 GO:GO:0009953 GO:GO:0000976
GO:GO:0060070 Orphanet:95494 MIM:262600 Orphanet:226307
GO:GO:0021979 GO:GO:0060126 CTD:5626 eggNOG:NOG293463
HOGENOM:HOG000115706 HOVERGEN:HBG053691 KO:K09327 OrthoDB:EOG4BZN3X
GO:GO:0048850 OMA:TCFPHPY EMBL:AF076214 EMBL:AF076215 EMBL:AF041141
EMBL:AF041139 EMBL:AF041140 EMBL:AC136940 EMBL:BC069076
IPI:IPI00025308 RefSeq:NP_006252.3 UniGene:Hs.158301
ProteinModelPortal:O75360 SMR:O75360 STRING:O75360
PhosphoSite:O75360 PRIDE:O75360 Ensembl:ENST00000308304 GeneID:5626
KEGG:hsa:5626 UCSC:uc003mif.1 GeneCards:GC05M177419 HGNC:HGNC:9455
MIM:601538 neXtProt:NX_O75360 Orphanet:90695 PharmGKB:PA33808
InParanoid:O75360 PhylomeDB:O75360 GenomeRNAi:5626 NextBio:21868
Bgee:O75360 CleanEx:HS_PROP1 Genevestigator:O75360
GermOnline:ENSG00000175325 Uniprot:O75360
Length = 226
Score = 137 (53.3 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 43/126 (34%), Positives = 56/126 (44%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+F+ Q++ LE F R YPD++ARE LA GL EARIQV NR R A Q+
Sbjct: 70 RRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNR--R--AKQR 125
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 227
+Q+ S + F P P S P P PH P
Sbjct: 126 KQERSLLQPLAHLSPAAFSSF--LPESTACPYSYAAPPPPVTCFPHPYSHALPSQPSTGG 183
Query: 228 EFERTH 233
F +H
Sbjct: 184 AFALSH 189
Score = 53 (23.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 299 WYPGSTPTPSPAHLALPHNPGSVTPISRDDAK 330
WYP P P+ HL P P + P+S + +K
Sbjct: 194 WYPTLHPAPA-GHLPCPPPP-PMLPLSLEPSK 223
>UNIPROTKB|P0CJ87 [details] [associations]
symbol:DUX4L4 "Double homeobox protein 4-like protein 4"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 EMBL:AC126281
IPI:IPI00472083 UniGene:Hs.725918 ProteinModelPortal:P0CJ87
SMR:P0CJ87 PhosphoSite:P0CJ87 Ensembl:ENST00000554637
Ensembl:ENST00000566884 GeneCards:GC04P191023 HGNC:HGNC:38686
neXtProt:NX_P0CJ87 ArrayExpress:P0CJ87 Bgee:P0CJ87 Uniprot:P0CJ87
Length = 422
Score = 114 (45.2 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 8 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 67
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 68 QNERSRQLRQHRRE 81
Score = 88 (36.0 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 111 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 149
Score = 42 (19.8 bits), Expect = 6.8e-09, Sum P(3) = 6.8e-09
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G P P PA
Sbjct: 320 GAAWEPQAGEAPPPQPA 336
>ZFIN|ZDB-GENE-070216-1 [details] [associations]
symbol:otpa "orthopedia homolog a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0021884 "forebrain neuron development"
evidence=IGI;IMP] [GO:0007632 "visual behavior" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-070216-1 GO:GO:0005634
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104013
GO:GO:0000976 GO:GO:0021884 eggNOG:NOG256838 HOVERGEN:HBG001617
OrthoDB:EOG4FXR8D HOGENOM:HOG000039976 OMA:RWATAGM EMBL:CU459136
EMBL:BC162329 EMBL:BC162331 IPI:IPI00484790 RefSeq:NP_001122175.1
UniGene:Dr.87162 STRING:B3DGA5 Ensembl:ENSDART00000027268
GeneID:560759 KEGG:dre:560759 CTD:560759 NextBio:20883602
Uniprot:B3DGA5
Length = 332
Score = 159 (61.0 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 37/93 (39%), Positives = 52/93 (55%)
Query: 66 GSVTPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKE 125
GS P ++K+ E P S+ + SQ +R+RT FT Q++ LE+
Sbjct: 80 GSNPPGVAVNSKDQEKQQQQQQNPTQSSSQQSQKQ-------KRHRTRFTPAQLNELERS 132
Query: 126 FERTHYPDVFARERLADKIGLPEARIQVSSINR 158
F +THYPD+F RE LA +IGL E+R+QV NR
Sbjct: 133 FAKTHYPDIFMREELALRIGLTESRVQVWFQNR 165
>UNIPROTKB|F1NFE6 [details] [associations]
symbol:SHOX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEA] [GO:0003209 "cardiac atrium
morphogenesis" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048557 "embryonic digestive tract morphogenesis"
evidence=IEA] [GO:0048743 "positive regulation of skeletal muscle
fiber development" evidence=IEA] [GO:0050772 "positive regulation
of axonogenesis" evidence=IEA] [GO:0060272 "embryonic skeletal
joint morphogenesis" evidence=IEA] [GO:0060351 "cartilage
development involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0060415 "muscle tissue morphogenesis"
evidence=IEA] [GO:2000172 "regulation of branching morphogenesis of
a nerve" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0032330
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104279 GO:GO:0002053 GO:GO:0048743
GO:GO:0045880 GO:GO:2000172 EMBL:AADN02017635 EMBL:AADN02017636
EMBL:AADN02017637 EMBL:AADN02017638 IPI:IPI00577004
Ensembl:ENSGALT00000026949 OMA:ARVQXVQ Uniprot:F1NFE6
Length = 221
Score = 151 (58.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 33/73 (45%), Positives = 45/73 (61%)
Query: 80 ESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARER 139
E D+ SE DED Q +R+RT+FT EQ++ LE+ F+ THYPD F RE
Sbjct: 33 EKREDVKSE-----DEDGQ----TKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREE 83
Query: 140 LADKIGLPEARIQ 152
L+ ++GL EAR+Q
Sbjct: 84 LSQRLGLSEARVQ 96
>ZFIN|ZDB-GENE-030131-9033 [details] [associations]
symbol:prrx1b "paired related homeobox 1b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-030131-9033 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010628 HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 HSSP:P10037
eggNOG:NOG267226 HOVERGEN:HBG021349 KO:K09329 OMA:WGSAAPY
EMBL:CU571309 EMBL:BC064671 IPI:IPI00499847 RefSeq:NP_956344.1
UniGene:Dr.76340 SMR:Q6P295 Ensembl:ENSDART00000061588
GeneID:337089 KEGG:dre:337089 CTD:337089 InParanoid:Q6P295
NextBio:20812053 Uniprot:Q6P295
Length = 245
Score = 154 (59.3 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 81 STSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S SD + N + + + +RNRT+F + Q+ +LE+ FERTHYPD F RE L
Sbjct: 74 SGSDTTQQENEQLNSEEKKKRKQ----RRNRTTFNSSQLQALERVFERTHYPDAFVREDL 129
Query: 141 ADKIGLPEARIQVSSINR 158
A ++ L EAR+QV NR
Sbjct: 130 ARRVNLTEARVQVWFQNR 147
>MGI|MGI:2153518 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IGI;IMP] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:2153518 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0048589
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 HSSP:P06601 CTD:127343
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OMA:PDTQLDT EMBL:AF448118 EMBL:AF499446 EMBL:AB037698 EMBL:AF421857
EMBL:AF421858 EMBL:AF463513 EMBL:AL627105 EMBL:BC050912
EMBL:AF461039 IPI:IPI00407603 IPI:IPI00752762 RefSeq:NP_001020738.1
RefSeq:NP_570935.3 UniGene:Mm.213206 UniGene:Mm.413175
ProteinModelPortal:Q91ZK4 SMR:Q91ZK4 MINT:MINT-1347271
STRING:Q91ZK4 PhosphoSite:Q91ZK4 PRIDE:Q91ZK4
Ensembl:ENSMUST00000064806 Ensembl:ENSMUST00000084338
Ensembl:ENSMUST00000124071 GeneID:140477 KEGG:mmu:140477
UCSC:uc008ufr.1 InParanoid:B1ASG1 OrthoDB:EOG4BCDNN NextBio:369772
Bgee:Q91ZK4 CleanEx:MM_DMBX1 Genevestigator:Q91ZK4
GermOnline:ENSMUSG00000028707 Uniprot:Q91ZK4
Length = 381
Score = 160 (61.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 49/140 (35%), Positives = 72/140 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--------- 158
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR
Sbjct: 72 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 131
Query: 159 VLRNLAAQKEQQAS-AHNQTS-ETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPG 216
L+ QK+++A +H + E ++ QP P P P+ L+L
Sbjct: 132 SLQKEQLQKQKEAEGSHGEGKVEAPASDTQLETEQP--PGLPSGDP-PAELQLSLSEQSA 188
Query: 217 SVT-PISRDDAKEFERTHYP 235
S + P + D +E R P
Sbjct: 189 SESAPEDQLDREEDSRAEEP 208
>UNIPROTKB|E1BHB8 [details] [associations]
symbol:LOC615339 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060173 "limb
development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0021854 "hypothalamus development"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0043010
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 GO:GO:0007389
GO:GO:0060173 GO:GO:0021854 GeneTree:ENSGT00700000104256
OMA:CGPGFGD EMBL:DAAA02057180 IPI:IPI00710082
Ensembl:ENSBTAT00000030986 Uniprot:E1BHB8
Length = 351
Score = 159 (61.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+QV NR
Sbjct: 138 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 188
>UNIPROTKB|O43186 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0043522 "leucine zipper domain binding"
evidence=IPI] [GO:0009887 "organ morphogenesis" evidence=TAS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007601 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0009887 GO:GO:0060041
Orphanet:65 MIM:268000 CTD:1406 eggNOG:NOG324074
HOGENOM:HOG000082677 HOVERGEN:HBG004028 KO:K09337 OMA:QTKARPA
OrthoDB:EOG4NKBWG EMBL:AF024711 EMBL:BT007364 EMBL:AC008745
EMBL:BC016664 EMBL:BC053672 IPI:IPI00011226 RefSeq:NP_000545.1
UniGene:Hs.617342 UniGene:Hs.633434 UniGene:Hs.639114
ProteinModelPortal:O43186 SMR:O43186 IntAct:O43186
MINT:MINT-1442706 STRING:O43186 PhosphoSite:O43186 PRIDE:O43186
DNASU:1406 Ensembl:ENST00000221996 Ensembl:ENST00000539067
Ensembl:ENST00000556900 Ensembl:ENST00000557738 GeneID:1406
KEGG:hsa:1406 UCSC:uc002phq.4 GeneCards:GC19P048327 HGNC:HGNC:2383
HPA:HPA036762 HPA:HPA036763 MIM:120970 MIM:602225 MIM:613829
neXtProt:NX_O43186 PharmGKB:PA26903 InParanoid:O43186
PhylomeDB:O43186 ChiTaRS:CRX GenomeRNAi:1406 NextBio:5749
ArrayExpress:O43186 Bgee:O43186 CleanEx:HS_CRX
Genevestigator:O43186 GermOnline:ENSG00000105392 Uniprot:O43186
Length = 299
Score = 157 (60.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 40/108 (37%), Positives = 57/108 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 215
QQ Q K R + G + P + P P ++ ++P
Sbjct: 98 RQQQKQQQQPPGG-QAKARPAKRKAGTSPRPSTDVCPDPLGISDSYSP 144
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F +T YPDV+ARE +A KI LPE+R+QV NR R Q+ QQ Q K
Sbjct: 58 FAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQRQQQKQQQQPPGG-QAKA 114
Query: 289 RMFNGQPGWAWYPGSTPTPSPAHLALPHNP 318
R + G + P + P P ++ ++P
Sbjct: 115 RPAKRKAGTSPRPSTDVCPDPLGISDSYSP 144
>UNIPROTKB|E2RMY1 [details] [associations]
symbol:PHOX2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:1901166 "neural crest cell migration involved
in autonomic nervous system development" evidence=IEA] [GO:0071773
"cellular response to BMP stimulus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0061452
"retrotrapezoid nucleus neuron differentiation" evidence=IEA]
[GO:0060541 "respiratory system development" evidence=IEA]
[GO:0048894 "efferent axon development in a lateral line nerve"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0048486 "parasympathetic nervous system development"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021934 "hindbrain tangential cell migration"
evidence=IEA] [GO:0021723 "medullary reticular formation
development" evidence=IEA] [GO:0021533 "cell differentiation in
hindbrain" evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0003360 "brainstem development"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0000978 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0001764 GO:GO:0008285 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 GO:GO:0048839
GO:GO:0000977 GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
GeneTree:ENSGT00700000104256 KO:K09330 CTD:8929 OMA:LVKTSMF
GO:GO:0048894 GO:GO:0021934 EMBL:AAEX03009007 RefSeq:XP_852840.1
Ensembl:ENSCAFT00000002818 GeneID:610284 KEGG:cfa:610284
NextBio:20895849 Uniprot:E2RMY1
Length = 314
Score = 151 (58.2 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 42/107 (39%), Positives = 56/107 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRNLA 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR +
Sbjct: 99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGST----PTPSPA 207
A A+A N +S D R + + P ST P P+PA
Sbjct: 159 AAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPA 205
Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
Identities = 42/126 (33%), Positives = 53/126 (42%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR---VLRNLAAQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR + A
Sbjct: 103 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAA 162
Query: 272 QQASAHNQTSETVYDKLRMFNGQ------PGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
A+A N +S D R + P PG P P+P+ A G +P
Sbjct: 163 AAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPAPSCGASGGGGGGPSPAG 222
Query: 326 RDDAKG 331
A G
Sbjct: 223 APGAAG 228
Score = 45 (20.9 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 293 GQPGWAWYPGSTPTPS-PAHLALP 315
G PG W PG P S P L P
Sbjct: 267 GGPGQGWAPGPGPITSIPDSLGGP 290
>UNIPROTKB|E2R2D3 [details] [associations]
symbol:PHOX2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048485 "sympathetic nervous system
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0021703 "locus ceruleus development" evidence=IEA] [GO:0021642
"trochlear nerve formation" evidence=IEA] [GO:0021623 "oculomotor
nerve formation" evidence=IEA] [GO:0021523 "somatic motor neuron
differentiation" evidence=IEA] [GO:0003357 "noradrenergic neuron
differentiation" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901 GO:GO:0048485
GO:GO:0043576 GO:GO:0000977 GO:GO:0048486 GO:GO:0021523
GO:GO:0021703 GO:GO:0003357 GeneTree:ENSGT00700000104256 CTD:401
KO:K09330 OMA:KGPLWAG EMBL:AAEX03012825 RefSeq:XP_542326.2
Ensembl:ENSCAFT00000009226 GeneID:485208 KEGG:cfa:485208
NextBio:20859246 Uniprot:E2R2D3
Length = 284
Score = 152 (58.6 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 44/115 (38%), Positives = 60/115 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR R ++
Sbjct: 91 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNR--RAKFRKQ 148
Query: 168 EQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPHNPGSVTP 220
E+ ASA K + + + +PTP S A L P PG +P
Sbjct: 149 ERAASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPPAPGLASP 203
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 43/127 (33%), Positives = 57/127 (44%)
Query: 204 PSPAHLALPHNPGSV-TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSS 258
P P+ L + T + KE ER THYPD++ RE LA KI L EAR+QV
Sbjct: 79 PEPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWF 138
Query: 259 INRVLRNLAAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPH 316
NR R ++E+ ASA K + + + +PTP S A L P
Sbjct: 139 QNR--RAKFRKQERAASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPP 196
Query: 317 NPGSVTP 323
PG +P
Sbjct: 197 APGLASP 203
Score = 41 (19.5 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 295 PGWAWYPGSTPTPSPAHLALPHNPG 319
PG A P +P+P PA L PG
Sbjct: 198 PGLA-SPRLSPSPLPAALGSGPGPG 221
>UNIPROTKB|F5GZ66 [details] [associations]
symbol:DUX4L2 "Double homeobox protein 4-like protein 7"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 UniGene:Hs.714689 HGNC:HGNC:37267
UniGene:Hs.723089 HGNC:HGNC:38688 UniGene:Hs.714687 HGNC:HGNC:38689
HGNC:HGNC:37265 UniGene:Hs.714688 HGNC:HGNC:37266 UniGene:Hs.553518
HGNC:HGNC:3082 RefSeq:NP_001120858.2 RefSeq:NP_001120859.2
RefSeq:NP_001120860.2 RefSeq:NP_001120861.2 RefSeq:NP_001157939.1
RefSeq:NP_149418.3 SMR:F5GZ66 DNASU:22947 Ensembl:ENST00000440426
Ensembl:ENST00000553598 Ensembl:ENST00000554668
Ensembl:ENST00000554690 Ensembl:ENST00000555191
Ensembl:ENST00000556625 GeneID:22947 GeneID:653543 GeneID:653544
GeneID:653545 GeneID:653548 GeneID:728410 KEGG:hsa:22947
KEGG:hsa:653543 KEGG:hsa:653544 KEGG:hsa:653545 KEGG:hsa:653548
KEGG:hsa:728410 UCSC:uc001lns.2 CTD:22947 CTD:653543 CTD:653544
CTD:653545 CTD:653548 CTD:728410 NextBio:43707 Uniprot:F5GZ66
Length = 485
Score = 114 (45.2 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 69 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 128
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 129 QNERSRQLRQHRRE 142
Score = 88 (36.0 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 172 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
Score = 43 (20.2 bits), Expect = 9.9e-09, Sum P(3) = 9.9e-09
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G+ P P PA
Sbjct: 381 GAAWEPQAGAAPPPQPA 397
>UNIPROTKB|G1K2Z3 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060021 "palate development" evidence=IEA] [GO:0071837 "HMG box
domain binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GeneTree:ENSGT00700000104279
OMA:WGSAAPY EMBL:AADN02033985 EMBL:AADN02033987 EMBL:AADN02033986
Ensembl:ENSGALT00000005264 Uniprot:G1K2Z3
Length = 245
Score = 153 (58.9 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNR 145
>UNIPROTKB|Q05437 [details] [associations]
symbol:PRRX1 "Paired mesoderm homeobox protein 1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000231518
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803 eggNOG:NOG267226
EMBL:D13433 EMBL:S69088 IPI:IPI00592701 PIR:I51226
RefSeq:NP_001007822.1 UniGene:Gga.1546 ProteinModelPortal:Q05437
SMR:Q05437 IntAct:Q05437 STRING:Q05437 GeneID:373941
KEGG:gga:373941 CTD:5396 HOVERGEN:HBG021349 InParanoid:Q05437
KO:K09329 OrthoDB:EOG4RR6J8 NextBio:20813473 Uniprot:Q05437
Length = 245
Score = 153 (58.9 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+F + Q+ +LE+ FERTHYPD F RE LA ++ L EAR+QV NR
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNR 145
>UNIPROTKB|F1MIH1 [details] [associations]
symbol:PHOX2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021703 "locus
ceruleus development" evidence=IEA] [GO:0021642 "trochlear nerve
formation" evidence=IEA] [GO:0021623 "oculomotor nerve formation"
evidence=IEA] [GO:0021523 "somatic motor neuron differentiation"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0030901
GO:GO:0048485 GO:GO:0043576 GO:GO:0000977 GO:GO:0048486
GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
GeneTree:ENSGT00700000104256 OMA:KGPLWAG EMBL:DAAA02041007
IPI:IPI00705954 Ensembl:ENSBTAT00000025512 Uniprot:F1MIH1
Length = 285
Score = 152 (58.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 44/115 (38%), Positives = 60/115 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR R ++
Sbjct: 92 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNR--RAKFRKQ 149
Query: 168 EQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPHNPGSVTP 220
E+ ASA K + + + +PTP S A L P PG +P
Sbjct: 150 ERAASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPPAPGLASP 204
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 43/127 (33%), Positives = 57/127 (44%)
Query: 204 PSPAHLALPHNPGSV-TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSS 258
P P+ L + T + KE ER THYPD++ RE LA KI L EAR+QV
Sbjct: 80 PEPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWF 139
Query: 259 INRVLRNLAAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPH 316
NR R ++E+ ASA K + + + +PTP S A L P
Sbjct: 140 QNR--RAKFRKQERAASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPP 197
Query: 317 NPGSVTP 323
PG +P
Sbjct: 198 APGLASP 204
Score = 41 (19.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 295 PGWAWYPGSTPTPSPAHLALPHNPG 319
PG A P +P+P PA L PG
Sbjct: 199 PGLA-SPRLSPSPLPAALGSGPGPG 222
>UNIPROTKB|E1BYW7 [details] [associations]
symbol:DRGX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0009593 "detection of chemical
stimulus" evidence=IEA] [GO:0016048 "detection of temperature
stimulus" evidence=IEA] [GO:0021516 "dorsal spinal cord
development" evidence=IEA] [GO:0021559 "trigeminal nerve
development" evidence=IEA] [GO:0050954 "sensory perception of
mechanical stimulus" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0009593 GO:GO:0016048 CTD:644168
OMA:KGSPLCS EMBL:AADN02027760 EMBL:AADN02027761 IPI:IPI00590363
RefSeq:XP_001234656.2 Ensembl:ENSGALT00000010049 GeneID:771373
KEGG:gga:771373 Uniprot:E1BYW7
Length = 260
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT +Q+++LE F +THYPDVF RE LA KI L EAR+QV NR
Sbjct: 34 RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNR 84
>UNIPROTKB|F1P729 [details] [associations]
symbol:ISX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:CCEAPKK EMBL:AAEX03007363 Ensembl:ENSCAFT00000002717
Uniprot:F1P729
Length = 238
Score = 152 (58.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/120 (36%), Positives = 57/120 (47%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT EQ+ LEK F THYPDV R +LA +I LPEAR+Q+ N+ + QK
Sbjct: 77 RRVRTTFTTEQLHELEKIFHFTHYPDVHIRNQLAARINLPEARVQIWFQNQRAK-WRKQK 135
Query: 168 EQQASAHNQTSET---VYDKLRMFNGQ-----PGWAWYPGSTPTPSPAHLALPHNPGSVT 219
A Q SE + L + P W P P+P A PG +T
Sbjct: 136 TGSLGASQQLSEAGLALATNLDVAGPMLPPSIPPWLALPTGCYPPAPGQPASAWFPGQIT 195
>FB|FBgn0001147 [details] [associations]
symbol:gsb-n "gooseberry-neuro" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0007367
"segment polarity determination" evidence=IEP;NAS] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005667
"transcription factor complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001356 InterPro:IPR001523
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071
PROSITE:PS51057 SMART:SM00351 SMART:SM00389 EMBL:AE013599
GO:GO:0005634 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007367
GO:GO:0000977 EMBL:AY071593 EMBL:M14941 EMBL:M14943 PIR:A26332
PIR:B43698 RefSeq:NP_523862.1 UniGene:Dm.5850
ProteinModelPortal:P09083 SMR:P09083 DIP:DIP-23099N IntAct:P09083
MINT:MINT-1723154 STRING:P09083 EnsemblMetazoa:FBtr0072461
GeneID:38004 KEGG:dme:Dmel_CG2692 CTD:38004 FlyBase:FBgn0001147
eggNOG:NOG326044 GeneTree:ENSGT00680000099553 HOGENOM:HOG000004133
InParanoid:P09083 KO:K09381 OMA:DMSSANS OrthoDB:EOG42BVRM
PhylomeDB:P09083 GenomeRNAi:38004 NextBio:806501 Bgee:P09083
GermOnline:CG2692 Uniprot:P09083
Length = 449
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 35/90 (38%), Positives = 50/90 (55%)
Query: 72 SRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHY 131
S D K++ + + +D +S+ +R+RT+FT EQ+++LE+ F RT Y
Sbjct: 147 SEDGRKDYTINGILGGRDSDISDTESEPGIPLKRKQRRSRTTFTAEQLEALERAFSRTQY 206
Query: 132 PDVFARERLADKIGLPEARIQVSSINRVLR 161
PDV+ RE LA L EARIQV NR R
Sbjct: 207 PDVYTREELAQTTALTEARIQVWFSNRRAR 236
>RGD|620511 [details] [associations]
symbol:Crx "cone-rod homeobox" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0007623 "circadian rhythm" evidence=IEP]
[GO:0043522 "leucine zipper domain binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046534 "positive
regulation of photoreceptor cell differentiation" evidence=IEP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:620511 GO:GO:0005634
GO:GO:0003677 GO:GO:0007623 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0060041 EMBL:CH473979 HOVERGEN:HBG004028
OMA:QTKARPA HSSP:P06601 GO:GO:0046534 IPI:IPI00325864 EMBL:AB021129
UniGene:Rn.44287 SMR:Q9WTQ9 STRING:Q9WTQ9 UCSC:RGD:620511
InParanoid:Q9WTQ9 Genevestigator:Q9WTQ9 Uniprot:Q9WTQ9
Length = 299
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/113 (36%), Positives = 58/113 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 220
QQ Q V K R + G + P + P ++ ++P P
Sbjct: 98 RQQQKQQQQPPG-VQAKARPAKRKAGTSPRPSTDVCTDPLGISDSYSPSLPGP 149
Score = 116 (45.9 bits), Expect = 0.00039, P = 0.00039
Identities = 41/134 (30%), Positives = 60/134 (44%)
Query: 200 STPTPSPAHLALPHNPG------SVTPISRDDAKEFE----RTHYPDVFARERLADKIGL 249
S P+ H A+P++ T +R +E E +T YPDV+ARE +A KI L
Sbjct: 19 SGPSVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINL 78
Query: 250 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 309
PE+R+QV NR R Q+ QQ Q V K R + G + P + P
Sbjct: 79 PESRVQVWFKNR--RAKCRQQRQQQKQQQQPPG-VQAKARPAKRKAGTSPRPSTDVCTDP 135
Query: 310 AHLALPHNPGSVTP 323
++ ++P P
Sbjct: 136 LGISDSYSPSLPGP 149
>UNIPROTKB|Q8SQ03 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 CTD:1406 eggNOG:NOG324074
HOGENOM:HOG000082677 HOVERGEN:HBG004028 KO:K09337 OrthoDB:EOG4NKBWG
EMBL:AF454668 EMBL:AJ507727 EMBL:AJ507728 EMBL:AJ507729
RefSeq:NP_001003049.1 UniGene:Cfa.94 ProteinModelPortal:Q8SQ03
SMR:Q8SQ03 STRING:Q8SQ03 GeneID:403577 KEGG:cfa:403577
InParanoid:Q8SQ03 NextBio:20817084 Uniprot:Q8SQ03
Length = 299
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/113 (36%), Positives = 58/113 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 220
QQ Q K R + G + S P P ++ ++P + P
Sbjct: 98 RQQQKEQPQPPGA-QTKARPAKRKAGMSPRSSSDVCPDPLGISDSYSPPLLGP 149
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F +T YPDV+ARE +A KI LPE+R+QV NR R Q+ QQ Q K
Sbjct: 58 FAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQRQQQKEQPQPPGA-QTKA 114
Query: 289 RMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 323
R + G + S P P ++ ++P + P
Sbjct: 115 RPAKRKAGMSPRSSSDVCPDPLGISDSYSPPLLGP 149
>ZFIN|ZDB-GENE-050208-140 [details] [associations]
symbol:alx4b "aristaless-like homeobox 4b"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-050208-140 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 HOVERGEN:HBG004214 eggNOG:NOG309608
OrthoDB:EOG4ZGPCG EMBL:BC135029 IPI:IPI00639059
RefSeq:NP_001082826.1 UniGene:Dr.90982 ProteinModelPortal:A4IGC5
SMR:A4IGC5 GeneID:497424 KEGG:dre:497424 CTD:497424
NextBio:20866003 Uniprot:A4IGC5
Length = 364
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/149 (33%), Positives = 75/149 (50%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QV NR + ++
Sbjct: 172 RRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRER 231
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWA------WYPGSTPTPSPAHLALPHNPGSVTPI 221
Q T Y+ L + +A W GS+ + SP PG V P
Sbjct: 232 FGQMQQVRTHFSTAYE-LPLLTRPENYAQIQNPSWLSGSS-SASPV-------PGCVVPC 282
Query: 222 SRDDAKEFERTHYPDVFARERLADKIGLP 250
D T +P + ++D +G+P
Sbjct: 283 ---DTVSSCMTPHPH--SASGVSDFLGMP 306
>UNIPROTKB|F1NL45 [details] [associations]
symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012178
EMBL:AADN02012179 IPI:IPI00590510 Ensembl:ENSGALT00000038807
ArrayExpress:F1NL45 Uniprot:F1NL45
Length = 116
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+R RTSFT Q+++LE F+ T YPD++ RERLAD +PE+RIQV NR
Sbjct: 4 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNR 54
Score = 95 (38.5 bits), Expect = 0.00052, P = 0.00052
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ T YPD++ RERLAD +PE+RIQV NR
Sbjct: 22 FQDTMYPDIYLRERLADATQIPESRIQVWFQNR 54
>UNIPROTKB|F1NL46 [details] [associations]
symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 IPI:IPI00572899
EMBL:AADN02012178 EMBL:AADN02012179 Ensembl:ENSGALT00000038806
OMA:AFPAGRW ArrayExpress:F1NL46 Uniprot:F1NL46
Length = 122
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+R RTSFT Q+++LE F+ T YPD++ RERLAD +PE+RIQV NR
Sbjct: 59 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQVWFQNR 109
Score = 95 (38.5 bits), Expect = 0.00052, P = 0.00052
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINR 261
F+ T YPD++ RERLAD +PE+RIQV NR
Sbjct: 77 FQDTMYPDIYLRERLADATQIPESRIQVWFQNR 109
>UNIPROTKB|H0YFN1 [details] [associations]
symbol:H0YFN1 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC025287 ProteinModelPortal:H0YFN1 SMR:H0YFN1
Ensembl:ENST00000538623 OMA:NKLVQAF Bgee:H0YFN1 Uniprot:H0YFN1
Length = 152
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/156 (32%), Positives = 76/156 (48%)
Query: 109 RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSIN-RVL-RNL--- 163
RNR + Q D L+ F+ +PD ARE+LA +IG+PE+ IQV N RV R L
Sbjct: 16 RNRIQYNQSQKDILQSWFQHDPFPDKAAREQLAKEIGVPESNIQVWFKNYRVKQRKLDYK 75
Query: 164 AAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTPISR 223
++ Q H+Q+ + L P A + T + + +
Sbjct: 76 CFSEKDQTQGHDQSQHLTQEYL------PKEARQKQTFITWTQKNRLV------------ 117
Query: 224 DDAKEFERTHYPDVFARERLADKIGLPEARIQVSSI 259
+ FER +PD+ R++LA++ GL E+RIQVSS+
Sbjct: 118 ---QAFERNPFPDIATRKKLAEQTGLQESRIQVSSM 150
>ZFIN|ZDB-GENE-040801-82 [details] [associations]
symbol:zgc:101100 "zgc:101100" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040801-82 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BC078232 IPI:IPI00490238
RefSeq:NP_001003563.1 UniGene:Dr.90945 ProteinModelPortal:Q6DC54
SMR:Q6DC54 GeneID:445169 KEGG:dre:445169 HOVERGEN:HBG097522
InParanoid:Q6DC54 NextBio:20831931 Uniprot:Q6DC54
Length = 266
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 41/94 (43%), Positives = 55/94 (58%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+F+ Q+ +LEK F++T YPDV RERLA I LPEARIQV NR + Q+
Sbjct: 72 RRSRTAFSVSQLQALEKAFQQTQYPDVGMRERLAVCINLPEARIQVWFKNRRAKFRKGQR 131
Query: 168 -------EQQA--SAHNQTSETVYDKLRMFNGQP 192
E Q SA Q E V D+ + +N +P
Sbjct: 132 FAPLPKEESQVHRSATKQRKELVKDQEKTYNSKP 165
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 34/78 (43%), Positives = 42/78 (53%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK-------EQQA--SAH 277
K F++T YPDV RERLA I LPEARIQV NR + Q+ E Q SA
Sbjct: 88 KAFQQTQYPDVGMRERLAVCINLPEARIQVWFKNRRAKFRKGQRFAPLPKEESQVHRSAT 147
Query: 278 NQTSETVYDKLRMFNGQP 295
Q E V D+ + +N +P
Sbjct: 148 KQRKELVKDQEKTYNSKP 165
>UNIPROTKB|E9PEK5 [details] [associations]
symbol:DUX4L4 "Double homeobox protein 4-like protein 4"
species:9606 "Homo sapiens" [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS50071
SMART:SM00389 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AC126281 IPI:IPI00472083 UniGene:Hs.725918
HGNC:HGNC:38686 RefSeq:NP_001170847.1 ProteinModelPortal:E9PEK5
SMR:E9PEK5 Ensembl:ENST00000538692 GeneID:441056 KEGG:hsa:441056
UCSC:uc010ist.1 CTD:441056 OMA:CHPAPWS GenomeRNAi:441056
NextBio:109726 ArrayExpress:E9PEK5 Bgee:E9PEK5 Uniprot:E9PEK5
Length = 483
Score = 114 (45.2 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 96 DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSS 155
DS + +R R +T Q ++L FER YP + RERLA IG+PE R+Q+
Sbjct: 69 DSTLPAEARGRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWF 128
Query: 156 INRVLRNLAAQKEQ 169
N R L + +
Sbjct: 129 QNERSRQLRQHRRE 142
Score = 88 (36.0 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 227 KEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRN 265
+ FE+ +P + ARE LA + GLPE+RIQ+ NR R+
Sbjct: 172 RAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARH 210
Score = 42 (19.8 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 296 GWAWYP--GSTPTPSPA 310
G AW P G P P PA
Sbjct: 381 GAAWEPQAGEAPPPQPA 397
>UNIPROTKB|Q99453 [details] [associations]
symbol:PHOX2B "Paired mesoderm homeobox protein 2B"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0048484 "enteric nervous system development" evidence=IEP]
[GO:0003360 "brainstem development" evidence=IEP] [GO:0048483
"autonomic nervous system development" evidence=IMP] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IDA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IC;ISS] [GO:1901166 "neural crest cell
migration involved in autonomic nervous system development"
evidence=ISS] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=ISS] [GO:0010001
"glial cell differentiation" evidence=ISS] [GO:0021723 "medullary
reticular formation development" evidence=ISS] [GO:0061452
"retrotrapezoid nucleus neuron differentiation" evidence=ISS]
[GO:0048485 "sympathetic nervous system development" evidence=ISS]
[GO:0048839 "inner ear development" evidence=ISS] [GO:0060541
"respiratory system development" evidence=ISS] [GO:0071773
"cellular response to BMP stimulus" evidence=ISS] [GO:0003357
"noradrenergic neuron differentiation" evidence=IC;ISS] [GO:0001764
"neuron migration" evidence=ISS] [GO:0021533 "cell differentiation
in hindbrain" evidence=ISS] [GO:0021934 "hindbrain tangential cell
migration" evidence=ISS] [GO:0048486 "parasympathetic nervous
system development" evidence=ISS] [GO:0048894 "efferent axon
development in a lateral line nerve" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AF117979 GO:GO:0001764 GO:GO:0008285 GO:GO:0071542
GO:GO:0045944 GO:GO:0045665 GO:GO:0002087 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000978
GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 Orphanet:635
GO:GO:0048839 GO:GO:0048485 Orphanet:99803 Orphanet:661
GO:GO:0048484 GO:GO:0048486 GO:GO:0010001 MIM:209880 GO:GO:0003360
GO:GO:0021533 GO:GO:0003357 eggNOG:NOG301263 HOGENOM:HOG000013060
KO:K09330 EMBL:D82344 EMBL:AB015671 EMBL:BC017199 IPI:IPI00293143
PIR:JC5273 RefSeq:NP_003915.2 UniGene:Hs.87202
ProteinModelPortal:Q99453 SMR:Q99453 STRING:Q99453
PhosphoSite:Q99453 DMDM:116242712 PaxDb:Q99453 PRIDE:Q99453
Ensembl:ENST00000226382 GeneID:8929 KEGG:hsa:8929 UCSC:uc003gwf.4
CTD:8929 GeneCards:GC04M041746 H-InvDB:HIX0120072 HGNC:HGNC:9143
MIM:603851 MIM:613013 neXtProt:NX_Q99453 PharmGKB:PA33467
HOVERGEN:HBG094678 InParanoid:Q99453 OMA:LVKTSMF PhylomeDB:Q99453
GenomeRNAi:8929 NextBio:33574 Bgee:Q99453 CleanEx:HS_PHOX2B
Genevestigator:Q99453 GermOnline:ENSG00000109132 GO:GO:0048894
GO:GO:0021934 GO:GO:0021723 GO:GO:1901166 GO:GO:0060541
GO:GO:0061452 Uniprot:Q99453
Length = 314
Score = 150 (57.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRNLA 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR +
Sbjct: 99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
A A+A N +S D R + + P ST P P
Sbjct: 159 AAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGP 200
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 42/126 (33%), Positives = 53/126 (42%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR---VLRNLAAQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR + A
Sbjct: 103 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAA 162
Query: 272 QQASAHNQTSETVYDKLRMFNGQ------PGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
A+A N +S D R + P PG P P+P+ A G +P
Sbjct: 163 AAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAG 222
Query: 326 RDDAKG 331
A G
Sbjct: 223 APGAAG 228
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 293 GQPGWAWYPGSTPTPS-PAHLALP 315
G PG W PG P S P L P
Sbjct: 267 GGPGQGWAPGPGPITSIPDSLGGP 290
>MGI|MGI:1100882 [details] [associations]
symbol:Phox2b "paired-like homeobox 2b" species:10090 "Mus
musculus" [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0001764
"neuron migration" evidence=IMP] [GO:0002087 "regulation of
respiratory gaseous exchange by neurological system process"
evidence=IMP] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010001 "glial cell differentiation"
evidence=IMP] [GO:0021533 "cell differentiation in hindbrain"
evidence=IMP] [GO:0021934 "hindbrain tangential cell migration"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IGI] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048468 "cell development" evidence=IMP] [GO:0048483 "autonomic
nervous system development" evidence=ISO] [GO:0048484 "enteric
nervous system development" evidence=IMP] [GO:0048485 "sympathetic
nervous system development" evidence=IMP] [GO:0048486
"parasympathetic nervous system development" evidence=IMP]
[GO:0048839 "inner ear development" evidence=IMP] [GO:0048894
"efferent axon development in a lateral line nerve" evidence=IMP]
[GO:0060541 "respiratory system development" evidence=IMP]
[GO:0061452 "retrotrapezoid nucleus neuron differentiation"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] [GO:0071773 "cellular response to BMP stimulus"
evidence=IDA] [GO:1901166 "neural crest cell migration involved in
autonomic nervous system development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1100882 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
GO:GO:0071542 GO:GO:0045944 GO:GO:0045665 GO:GO:0002087
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790
GO:GO:0071773 GO:GO:0045666 GO:GO:0048839 GO:GO:0035914
GO:GO:0048485 GO:GO:0000977 GO:GO:0048484 GO:GO:0048486
GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
GeneTree:ENSGT00700000104256 eggNOG:NOG301263 HOGENOM:HOG000013060
KO:K09330 CTD:8929 HOVERGEN:HBG094678 OMA:LVKTSMF GO:GO:0048894
GO:GO:0021934 GO:GO:0021723 GO:GO:1901166 GO:GO:0060541
GO:GO:0061452 EMBL:Y14493 EMBL:AB015672 EMBL:BC079610
IPI:IPI00132995 RefSeq:NP_032914.1 UniGene:Mm.62505
ProteinModelPortal:O35690 SMR:O35690 STRING:O35690
PhosphoSite:O35690 PRIDE:O35690 Ensembl:ENSMUST00000012664
GeneID:18935 KEGG:mmu:18935 UCSC:uc008xpm.1 InParanoid:O35690
NextBio:295256 Bgee:O35690 CleanEx:MM_PHOX2B Genevestigator:O35690
GermOnline:ENSMUSG00000012520 Uniprot:O35690
Length = 314
Score = 150 (57.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRNLA 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR +
Sbjct: 99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
A A+A N +S D R + + P ST P P
Sbjct: 159 AAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGP 200
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 42/126 (33%), Positives = 53/126 (42%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR---VLRNLAAQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR + A
Sbjct: 103 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAA 162
Query: 272 QQASAHNQTSETVYDKLRMFNGQ------PGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
A+A N +S D R + P PG P P+P+ A G +P
Sbjct: 163 AAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAG 222
Query: 326 RDDAKG 331
A G
Sbjct: 223 APGAAG 228
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 293 GQPGWAWYPGSTPTPS-PAHLALP 315
G PG W PG P S P L P
Sbjct: 267 GGPGQGWAPGPGPITSIPDSLGGP 290
>UNIPROTKB|F2Z3R9 [details] [associations]
symbol:Phox2b "Protein Phox2b" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:1560582 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:LVKTSMF IPI:IPI00359254 ProteinModelPortal:F2Z3R9 SMR:F2Z3R9
Ensembl:ENSRNOT00000003136 Uniprot:F2Z3R9
Length = 314
Score = 150 (57.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRNLA 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR +
Sbjct: 99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
A A+A N +S D R + + P ST P P
Sbjct: 159 AAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGP 200
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 42/126 (33%), Positives = 53/126 (42%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR---VLRNLAAQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR + A
Sbjct: 103 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAAAA 162
Query: 272 QQASAHNQTSETVYDKLRMFNGQ------PGWAWYPGSTPTPSPAHLALPHNPGSVTPIS 325
A+A N +S D R + P PG P P+P+ A G +P
Sbjct: 163 AAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGPNPNPTPSCGANGGGGGGPSPAG 222
Query: 326 RDDAKG 331
A G
Sbjct: 223 APGAAG 228
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 293 GQPGWAWYPGSTPTPS-PAHLALP 315
G PG W PG P S P L P
Sbjct: 267 GGPGQGWAPGPGPITSIPDSLGGP 290
>ZFIN|ZDB-GENE-030508-1 [details] [associations]
symbol:otx5 "orthodenticle homolog 5" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP;IPI] [GO:0032922 "circadian regulation of gene
expression" evidence=IMP] InterPro:IPR001356 InterPro:IPR003025
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 ZFIN:ZDB-GENE-030508-1 GO:GO:0007275
GO:GO:0005634 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0032922 HOVERGEN:HBG004028
HSSP:P06601 EMBL:AY036005 IPI:IPI00501623 UniGene:Dr.15426
ProteinModelPortal:Q8UUZ5 SMR:Q8UUZ5 STRING:Q8UUZ5
InParanoid:Q8UUZ5 ArrayExpress:Q8UUZ5 Uniprot:Q8UUZ5
Length = 289
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/116 (39%), Positives = 63/116 (54%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR R Q+
Sbjct: 39 RRERTTFTRAQLDVLEALFSKTRYPDIFMREEVALKINLPESRVQVWFKNR--RAKCRQQ 96
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGS-VTPIS 222
+QQ ++ QT K + + A P S T P + P PG+ +TP S
Sbjct: 97 QQQQTS-GQTKPRP-PKKKSSPARDSSASEP-SASTNGP-YSPPPPPPGTAITPSS 148
>UNIPROTKB|E1BME7 [details] [associations]
symbol:PHOX2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:1901166 "neural crest cell migration involved in
autonomic nervous system development" evidence=IEA] [GO:0071773
"cellular response to BMP stimulus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0061452
"retrotrapezoid nucleus neuron differentiation" evidence=IEA]
[GO:0060541 "respiratory system development" evidence=IEA]
[GO:0048894 "efferent axon development in a lateral line nerve"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
[GO:0048486 "parasympathetic nervous system development"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0021934 "hindbrain tangential cell migration"
evidence=IEA] [GO:0021723 "medullary reticular formation
development" evidence=IEA] [GO:0021533 "cell differentiation in
hindbrain" evidence=IEA] [GO:0010001 "glial cell differentiation"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0003360 "brainstem development"
evidence=IEA] [GO:0003357 "noradrenergic neuron differentiation"
evidence=IEA] [GO:0002087 "regulation of respiratory gaseous
exchange by neurological system process" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0000978 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0001764 GO:GO:0008285 GO:GO:0045944
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0071773 GO:GO:0045666 GO:GO:0048839
GO:GO:0000977 GO:GO:0010001 GO:GO:0021533 GO:GO:0003357
GeneTree:ENSGT00700000104256 KO:K09330 CTD:8929 OMA:LVKTSMF
GO:GO:0048894 GO:GO:0021934 EMBL:DAAA02017501 IPI:IPI01002460
RefSeq:XP_002688259.1 UniGene:Bt.46280 Ensembl:ENSBTAT00000061286
GeneID:783703 KEGG:bta:783703 NextBio:20926255 Uniprot:E1BME7
Length = 315
Score = 150 (57.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR---VLRNLA 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR +
Sbjct: 99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQER 158
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 206
A A+A N +S D R + + P ST P P
Sbjct: 159 AAAAAAAAAKNGSSGKKSDSSRDDESKEAKSTDPDSTGGPGP 200
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 293 GQPGWAWYPGSTPTPS-PAHLALP 315
G PG W PG P S P L P
Sbjct: 268 GGPGQGWAPGPGPITSIPDSLGGP 291
>MGI|MGI:1277097 [details] [associations]
symbol:Alx3 "aristaless-like homeobox 3" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IGI]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=IGI]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0042981 "regulation of apoptotic process" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:1277097 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0035116 GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704
CTD:257 eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OMA:PYSHPHG
OrthoDB:EOG40K810 GO:GO:0007389 EMBL:U96109 IPI:IPI00115634
RefSeq:NP_031467.1 UniGene:Mm.10112 ProteinModelPortal:O70137
SMR:O70137 STRING:O70137 PhosphoSite:O70137 PRIDE:O70137
DNASU:11694 Ensembl:ENSMUST00000014747 GeneID:11694 KEGG:mmu:11694
InParanoid:O70137 NextBio:279353 Bgee:O70137 CleanEx:MM_ALX3
Genevestigator:O70137 GermOnline:ENSMUSG00000014603 Uniprot:O70137
Length = 343
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 87 SEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
S P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L
Sbjct: 133 SVPLSPGLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDL 192
Query: 147 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
EAR+QV NR + ++ + T YD
Sbjct: 193 TEARVQVWFQNRRAKWRKRERYGKMQEGRNPFTTAYD 229
>RGD|1359270 [details] [associations]
symbol:Alx3 "ALX homeobox 3" species:10116 "Rattus norvegicus"
[GO:0007389 "pattern specification process" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:AY488087 RGD:1359270 GO:GO:0005634 GO:GO:0042981 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0035116
GO:GO:0035115 HOGENOM:HOG000231518 GO:GO:0048704 CTD:257
eggNOG:NOG292934 HOVERGEN:HBG004213 KO:K09323 OrthoDB:EOG40K810
GO:GO:0007389 IPI:IPI00421290 RefSeq:NP_001007013.1
UniGene:Rn.18878 ProteinModelPortal:Q6RW14 SMR:Q6RW14 GeneID:365900
KEGG:rno:365900 InParanoid:Q6RW14 NextBio:688313
ArrayExpress:Q6RW14 Genevestigator:Q6RW14 Uniprot:Q6RW14
Length = 343
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 87 SEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGL 146
S P S DS +RNRT+F+ Q++ LEK F++THYPDV+ARE+LA + L
Sbjct: 133 SVPLSPGLPDSMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDL 192
Query: 147 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYD 183
EAR+QV NR + ++ + T YD
Sbjct: 193 TEARVQVWFQNRRAKWRKRERYGKIQEGRNPFTTAYD 229
>FB|FBgn0026058 [details] [associations]
symbol:OdsH "Ods-site homeobox" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0032504 "multicellular organism
reproduction" evidence=IEP] [GO:0005615 "extracellular space"
evidence=IDA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005615 EMBL:AE014298
GO:GO:0043565 GO:GO:0032504 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:P06601 GeneTree:ENSGT00700000104564
FlyBase:FBgn0026058 EMBL:BT022139 RefSeq:NP_523389.3
UniGene:Dm.2729 SMR:Q9VX20 STRING:Q9VX20 EnsemblMetazoa:FBtr0074461
GeneID:32758 KEGG:dme:Dmel_CG6352 UCSC:CG6352-RA CTD:32758
InParanoid:Q9VX20 OMA:TTHHEND GenomeRNAi:32758 NextBio:780212
Uniprot:Q9VX20
Length = 382
Score = 130 (50.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 81 STSDINSEPNSSADEDSQMXX---XXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFAR 137
S+ I +P S DS + +R RT+F + Q+ LE+ F+ +HYPD+F R
Sbjct: 129 SSRGIKQDPLSDEGADSNLGQNDCTESSKKRRGRTNFNSWQLRELERVFQGSHYPDIFMR 188
Query: 138 ERLADKIGLPEARIQVSSINR 158
E LA K+ L E RI V NR
Sbjct: 189 EALATKLDLMEGRIAVWFQNR 209
Score = 71 (30.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 11/14 (78%), Positives = 13/14 (92%)
Query: 340 VWFSNRRAKWRREE 353
VWF NRRAKWR++E
Sbjct: 204 VWFQNRRAKWRKQE 217
Score = 59 (25.8 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 24/86 (27%), Positives = 36/86 (41%)
Query: 206 PAHLALPHN-PGSVTPISRDDAKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR 264
PAH A P + G P+S A+E + A +R A K L + ++V
Sbjct: 226 PAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKK--LQDKGLEVDYARLEAE 283
Query: 265 NLAAQKEQQASAHNQTSETVYDKLRM 290
LAA +E +N + YD L +
Sbjct: 284 YLAAHQENGVDENNWLDDDGYDDLHI 309
Score = 55 (24.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 309 PAHLALPHN-PGSVTPISRDDAKGLVQQSARQVWFSNRRAKWRREEKL 355
PAH A P + G P+S A+ L Q+S R +R+AK +++ L
Sbjct: 226 PAHNAHPQSCSGDPIPLSELRARELAQRSKRMKKAIDRQAKKLQDKGL 273
>UNIPROTKB|F1LPR9 [details] [associations]
symbol:Crx "Protein Crx" species:10116 "Rattus norvegicus"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0043522 "leucine zipper domain binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR013851 InterPro:IPR017970
Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:620511 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0060041 GeneTree:ENSGT00700000104128 IPI:IPI00325864
Ensembl:ENSRNOT00000018858 ArrayExpress:F1LPR9 Uniprot:F1LPR9
Length = 323
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/113 (36%), Positives = 58/113 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 64 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 121
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 220
QQ Q V K R + G + P + P ++ ++P P
Sbjct: 122 RQQQKQQQQPPG-VQAKARPAKRKAGTSPRPSTDVCTDPLGISDSYSPSLPGP 173
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 41/134 (30%), Positives = 60/134 (44%)
Query: 200 STPTPSPAHLALPHNPG------SVTPISRDDAKEFE----RTHYPDVFARERLADKIGL 249
S P+ H A+P++ T +R +E E +T YPDV+ARE +A KI L
Sbjct: 43 SGPSVDLMHQAVPYSSAPRKQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINL 102
Query: 250 PEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSP 309
PE+R+QV NR R Q+ QQ Q V K R + G + P + P
Sbjct: 103 PESRVQVWFKNR--RAKCRQQRQQQKQQQQPPG-VQAKARPAKRKAGTSPRPSTDVCTDP 159
Query: 310 AHLALPHNPGSVTP 323
++ ++P P
Sbjct: 160 LGISDSYSPSLPGP 173
>RGD|1310201 [details] [associations]
symbol:Alx4 "ALX homeobox 4" species:10116 "Rattus norvegicus"
[GO:0001942 "hair follicle development" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007389 "pattern
specification process" evidence=ISO] [GO:0007517 "muscle organ
development" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0009791 "post-embryonic development" evidence=ISO]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISO] [GO:0035108 "limb morphogenesis" evidence=ISO]
[GO:0035115 "embryonic forelimb morphogenesis" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=ISO]
[GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048565 "digestive
tract development" evidence=ISO] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=ISO] [GO:0048705 "skeletal system
morphogenesis" evidence=ISO] [GO:0060021 "palate development"
evidence=ISO] [GO:0071837 "HMG box domain binding" evidence=ISO]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
RGD:1310201 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 IPI:IPI00563344
Ensembl:ENSRNOT00000047661 UCSC:RGD:1310201 Uniprot:D4A4C2
Length = 324
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+RNRT+FT+ Q++ LEK F++THYPDV+ARE+LA + L EAR+QV NR
Sbjct: 203 RRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 253
>RGD|3674 [details] [associations]
symbol:Shox2 "short stature homeobox 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0002053 "positive regulation of mesenchymal
cell proliferation" evidence=IEA;ISO] [GO:0002062 "chondrocyte
differentiation" evidence=ISO] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0003170 "heart valve development"
evidence=IEA;ISO] [GO:0003209 "cardiac atrium morphogenesis"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030326 "embryonic limb morphogenesis"
evidence=IEA;ISO] [GO:0032330 "regulation of chondrocyte
differentiation" evidence=IEA;ISO] [GO:0035115 "embryonic forelimb
morphogenesis" evidence=ISO] [GO:0045880 "positive regulation of
smoothened signaling pathway" evidence=IEA;ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IEA;ISO] [GO:0048598 "embryonic
morphogenesis" evidence=ISO] [GO:0048743 "positive regulation of
skeletal muscle fiber development" evidence=IEA;ISO] [GO:0050772
"positive regulation of axonogenesis" evidence=IEA;ISO] [GO:0060272
"embryonic skeletal joint morphogenesis" evidence=IEA;ISO]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA;ISO] [GO:0060415 "muscle tissue
morphogenesis" evidence=IEA;ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA;ISO] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3674
GO:GO:0005634 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0030326 GO:GO:0050772
GO:GO:0032330 GO:GO:0001649 HOGENOM:HOG000231518 InterPro:IPR003654
Pfam:PF03826 PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272
GO:GO:0002053 GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR R ++
Sbjct: 47 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR--RAKCRKQ 104
Query: 168 EQQ 170
E Q
Sbjct: 105 ENQ 107
>UNIPROTKB|O35750 [details] [associations]
symbol:Shox2 "Short stature homeobox protein 2"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 RGD:3674 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
GO:GO:0030326 GO:GO:0050772 GO:GO:0032330 GO:GO:0001649
HOGENOM:HOG000231518 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GO:GO:0060272 GO:GO:0002053
GO:GO:0048743 GO:GO:0060351 GO:GO:0002063 GO:GO:0045880
GO:GO:0003209 GO:GO:0048557 GO:GO:0060415 GO:GO:2000172 CTD:6474
eggNOG:NOG113578 HOVERGEN:HBG007233 KO:K09331 OrthoDB:EOG41C6X2
GO:GO:0003170 EMBL:AJ002258 EMBL:AJ002259 EMBL:AJ002260
IPI:IPI00231489 IPI:IPI00559825 RefSeq:NP_037160.1 UniGene:Rn.11258
ProteinModelPortal:O35750 SMR:O35750 STRING:O35750 GeneID:25546
KEGG:rno:25546 UCSC:RGD:3674 InParanoid:O35750 NextBio:607081
Genevestigator:O35750 GermOnline:ENSRNOG00000012478 Uniprot:O35750
Length = 237
Score = 151 (58.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R+RT+FT EQ++ LE+ F+ THYPD F RE L+ ++GL EAR+QV NR R ++
Sbjct: 47 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR--RAKCRKQ 104
Query: 168 EQQ 170
E Q
Sbjct: 105 ENQ 107
>UNIPROTKB|F1NMR5 [details] [associations]
symbol:F1NMR5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0003360
"brainstem development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0010001 "glial
cell differentiation" evidence=IEA] [GO:0021533 "cell
differentiation in hindbrain" evidence=IEA] [GO:0021723 "medullary
reticular formation development" evidence=IEA] [GO:0021934
"hindbrain tangential cell migration" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048485 "sympathetic
nervous system development" evidence=IEA] [GO:0048486
"parasympathetic nervous system development" evidence=IEA]
[GO:0048839 "inner ear development" evidence=IEA] [GO:0048894
"efferent axon development in a lateral line nerve" evidence=IEA]
[GO:0060541 "respiratory system development" evidence=IEA]
[GO:0061452 "retrotrapezoid nucleus neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
evidence=IEA] [GO:1901166 "neural crest cell migration involved in
autonomic nervous system development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0008285 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000790 GO:GO:0071773 GO:GO:0000977
GeneTree:ENSGT00700000104256 OMA:LVKTSMF EMBL:AADN02031232
EMBL:AADN02031233 IPI:IPI00813291 Ensembl:ENSGALT00000037451
Uniprot:F1NMR5
Length = 229
Score = 150 (57.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 43/107 (40%), Positives = 56/107 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINR--VLRNLA- 164
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR R L
Sbjct: 99 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKLER 158
Query: 165 AQKEQQASAHNQTSETVYDKLRMFNGQPGWAWYPGST----PTPSPA 207
A A+A N + D R + + P ST P P+PA
Sbjct: 159 AAAAAAAAAKNGAAGKKSDASRDDESKEAKSTDPDSTGGPGPNPNPA 205
Score = 111 (44.1 bits), Expect = 0.00076, P = 0.00076
Identities = 39/103 (37%), Positives = 48/103 (46%)
Query: 219 TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSSINR--VLRNLA-AQKE 271
T + KE ER THYPD++ RE LA KI L EAR+QV NR R L A
Sbjct: 103 TTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKLERAAAA 162
Query: 272 QQASAHNQTSETVYDKLRMFNGQPGWAWYPGST----PTPSPA 310
A+A N + D R + + P ST P P+PA
Sbjct: 163 AAAAAKNGAAGKKSDASRDDESKEAKSTDPDSTGGPGPNPNPA 205
>ZFIN|ZDB-GENE-980526-27 [details] [associations]
symbol:otx1a "orthodenticle homolog 1a" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030917 "midbrain-hindbrain boundary development" evidence=IGI]
[GO:0030901 "midbrain development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IGI] [GO:0003406 "retinal pigment
epithelium development" evidence=IGI] InterPro:IPR001356
InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-980526-27 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0030901 GO:GO:0030902
GO:GO:0030917 GeneTree:ENSGT00700000104128 HOGENOM:HOG000082677
HOVERGEN:HBG004028 eggNOG:NOG245767 EMBL:D26174 EMBL:BC076432
EMBL:BX855617 IPI:IPI00506733 RefSeq:NP_571290.1 UniGene:Dr.75758
ProteinModelPortal:Q90267 SMR:Q90267 STRING:Q90267
Ensembl:ENSDART00000006538 GeneID:30462 KEGG:dre:30462 CTD:30462
InParanoid:Q90267 OMA:QRAMSSG OrthoDB:EOG4868DB NextBio:20806856
Bgee:Q90267 Uniprot:Q90267
Length = 338
Score = 156 (60.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 33/69 (47%), Positives = 47/69 (68%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR R Q+
Sbjct: 39 RRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNR--RAKCRQQ 96
Query: 168 EQQASAHNQ 176
+QQ+S +++
Sbjct: 97 QQQSSTNSK 105
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCL 424
G F P ++ SS + NPS L
Sbjct: 126 GHFTPPAVSSSSSSSSSSSGSNPSAL 151
>UNIPROTKB|E2QW59 [details] [associations]
symbol:RAX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104256 EMBL:AAEX03000108 EMBL:AAEX03000109
Ensembl:ENSCAFT00000000155 Uniprot:E2QW59
Length = 331
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV----SSINRVLRNL 163
+RNRT+FT Q+ LE+ FE++HYPDV++RE LA K+ LPE R+Q +V
Sbjct: 137 RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQPYLKGKRQKQVKHRK 196
Query: 164 AAQKEQQASAHNQTSET 180
+ K Q+A A ET
Sbjct: 197 SEPKSQRARAEPHREET 213
>FB|FBgn0036285 [details] [associations]
symbol:toe "twin of eyg" species:7227 "Drosophila
melanogaster" [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51057 SMART:SM00351 SMART:SM00389
GO:GO:0005634 EMBL:AE014296 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0048749
GeneTree:ENSGT00680000099553 HSSP:Q02548 eggNOG:NOG245626
EMBL:AY069177 RefSeq:NP_524041.2 UniGene:Dm.941 SMR:Q8T0M4
IntAct:Q8T0M4 MINT:MINT-1756396 EnsemblMetazoa:FBtr0075980
GeneID:39418 KEGG:dme:Dmel_CG10704 UCSC:CG10704-RA CTD:39418
FlyBase:FBgn0036285 InParanoid:Q8T0M4 OMA:WRRHQRV OrthoDB:EOG4KKWKX
GenomeRNAi:39418 NextBio:813536 Uniprot:Q8T0M4
Length = 640
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 38/92 (41%), Positives = 54/92 (58%)
Query: 70 PISRDDAKEHESTSDINSEPNSSAD---EDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEF 126
P D+ +S S +++ N D EDS+ +RNRT+F+ EQ+D LEKEF
Sbjct: 345 PALSPDSGSRDSRSP-DADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEF 403
Query: 127 ERTHYPDVFARERLADKIGLPEARIQVSSINR 158
+++HYP V RE+LA + L EAR+QV NR
Sbjct: 404 DKSHYPCVNTREKLAARTALSEARVQVWFSNR 435
Score = 96 (38.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 214 NPGSVTPISRDDA-KEFERTHYPDVFARERLADKIGLPEARIQVSSINR 261
N + +P D+ KEF+++HYP V RE+LA + L EAR+QV NR
Sbjct: 387 NRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNR 435
Score = 69 (29.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 124 KEFERTHYPDVFA---RERLADKIGLPEARI-QVSSINRVLRNLAAQKEQ----QASAHN 175
++++R + P +FA RERL + A VSSINR+LRN AA++ +A+++
Sbjct: 190 EQYKREN-PTIFAWEIRERLITEGVCTNATAPSVSSINRILRNRAAERAAAEFARAASYG 248
Query: 176 QTSETVYDKLRMFNGQPGW-AWYP--GSTPTPSP 206
+ + P W A +P G+ P +P
Sbjct: 249 YAIHPTHP--HPYTSFPTWPAHHPLWGAVPLATP 280
>UNIPROTKB|E1BJV4 [details] [associations]
symbol:E1BJV4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0021985
"neurohypophysis development" evidence=IEA] [GO:0021979
"hypothalamus cell differentiation" evidence=IEA] [GO:0021879
"forebrain neuron differentiation" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 GO:GO:0021879 GO:GO:0002052
OMA:RWATAGM GO:GO:0021979 GO:GO:0021985 EMBL:DAAA02027771
EMBL:DAAA02027772 IPI:IPI00697466 Ensembl:ENSBTAT00000012187
Uniprot:E1BJV4
Length = 318
Score = 152 (58.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 42/128 (32%), Positives = 59/128 (46%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQV 153
L E+R+QV
Sbjct: 143 LTESRVQV 150
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 191 QPGWAWYPGSTPTP--SPAHLALPHNPGSVTPISR 223
Q WAW PG + +PA + P P V P S+
Sbjct: 149 QVRWAWAPGKKTSGVLTPAGNSTPA-PVIVQPPSK 182
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 294 QPGWAWYPGSTPTP--SPAHLALPHNPGSVTPISR 326
Q WAW PG + +PA + P P V P S+
Sbjct: 149 QVRWAWAPGKKTSGVLTPAGNSTPA-PVIVQPPSK 182
>UNIPROTKB|F1PR37 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9615 "Canis
lupus familiaris" [GO:0060041 "retina development in camera-type
eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043522 "leucine zipper domain binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
GeneTree:ENSGT00700000104128 OMA:QTKARPA EMBL:AAEX03000828
ProteinModelPortal:F1PR37 Ensembl:ENSCAFT00000006519 Uniprot:F1PR37
Length = 299
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 40/108 (37%), Positives = 56/108 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 215
QQ Q K R + G + S P P ++ ++P
Sbjct: 98 RQQQKQQPQPPGA-QTKARPAKRKAGMSPRSSSDVCPDPLGISDSYSP 144
>FB|FBgn0008636 [details] [associations]
symbol:hbn "homeobrain" species:7227 "Drosophila
melanogaster" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;NAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG313402 HSSP:P06601
EMBL:AJ276705 ProteinModelPortal:Q9GRX3 SMR:Q9GRX3 STRING:Q9GRX3
PaxDb:Q9GRX3 PRIDE:Q9GRX3 FlyBase:FBgn0008636 InParanoid:Q9GRX3
OrthoDB:EOG4VX0NB ArrayExpress:Q9GRX3 Bgee:Q9GRX3 Uniprot:Q9GRX3
Length = 409
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/272 (27%), Positives = 117/272 (43%)
Query: 69 TPISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFER 128
+P + D + ++ +++S N+ D S M +R+RT+FT Q+ LE+ FE+
Sbjct: 118 SPTNTDGGLDVDNDDELSSSLNNGHDL-SDMERPRKV--RRSRTTFTTFQLHQLERAFEK 174
Query: 129 THYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK-EQQASAHNQTSETVYDKLRM 187
T YPDVF RE LA ++ L EAR+QV NR + +K Q A E + +
Sbjct: 175 TQYPDVFTREDLAMRLDLSEARVQVWFQNRRAKWRKREKFMNQDKAGYLLPEQGLPEFPL 234
Query: 188 FNGQP--GWAWYPGSTPTPS-PAHLAL-PH-NPGSVTPISRDDAKEFERTHYPDVFARER 242
P G +PGS + P H AL H NP + + HY
Sbjct: 235 GIPLPPHGLPGHPGSMQSEFWPPHFALHQHFNPAAAAAAGLLP-QHLMAPHYKLPNFHTL 293
Query: 243 LADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKLR-MFNGQPGWAWYP 301
L+ +GL S++N + AA ASA + +++ L M P +
Sbjct: 294 LSQYMGL-------SNLNGIFGAGAAAAAAAASAGYPQNLSLHAGLSAMSQVSPPCS--- 343
Query: 302 GSTPTPSPAHLALPHNPGSVTPISRDDAKGLV 333
S+P SP + P P + P S + GL+
Sbjct: 344 NSSPRESPKLVPHPTPPHATPPASGNGGGGLL 375
>UNIPROTKB|F1N9J8 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012643
IPI:IPI00683833 Ensembl:ENSGALT00000016994 Uniprot:F1N9J8
Length = 303
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR----NL 163
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 69 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 128
Query: 164 AAQKEQ 169
+ QKEQ
Sbjct: 129 SLQKEQ 134
>MGI|MGI:1918847 [details] [associations]
symbol:Isx "intestine specific homeobox" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:1901738 "regulation of vitamin A metabolic process"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1918847 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104256 CTD:91464 eggNOG:NOG252360
HOGENOM:HOG000052524 HOVERGEN:HBG096596 OrthoDB:EOG4PZJ7F
EMBL:AK018615 EMBL:BC128289 EMBL:BC128290 IPI:IPI00316540
IPI:IPI00850211 RefSeq:NP_082113.2 UniGene:Mm.158735
ProteinModelPortal:A1A546 SMR:A1A546 STRING:A1A546
PhosphoSite:A1A546 PRIDE:A1A546 Ensembl:ENSMUST00000034034
Ensembl:ENSMUST00000174427 GeneID:71597 KEGG:mmu:71597
UCSC:uc012ggb.1 InParanoid:A1A546 OMA:CEAPENL NextBio:334069
Bgee:A1A546 CleanEx:MM_ISX Genevestigator:A1A546 Uniprot:A1A546
Length = 240
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT EQ+ LEK F THYPD+ R +LA +I LPEAR+Q+ N+ + +K
Sbjct: 79 RRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEK 138
Query: 168 EQQASAHNQTSE 179
SA Q E
Sbjct: 139 SGNLSAPQQPGE 150
>UNIPROTKB|E2RC05 [details] [associations]
symbol:OTP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104013 EMBL:AAEX03002130
Ensembl:ENSCAFT00000014646 Uniprot:E2RC05
Length = 325
Score = 154 (59.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 45/147 (30%), Positives = 67/147 (45%)
Query: 29 ETVYDKLRMFNGQPGWAWYPGSTXXXXXXXXXXXXXXGS-VTPISRDDAKEHESTSDINS 87
E V +L + PG +PG G +T + A S D +
Sbjct: 25 EAVKCRLGVGGSDPGG--HPGDLAPSSDPVEGATLLPGEDITTVGSTPASLAVSAKDPDK 82
Query: 88 EPNSSADED-SQMXXXXXXXXQ-RNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIG 145
+P + SQ Q R+RT FT Q++ LE+ F +THYPD+F RE LA +IG
Sbjct: 83 QPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIG 142
Query: 146 LPEARIQVSSINRVLRNLAAQKEQQAS 172
L E+R+QV +R R +K ++ +
Sbjct: 143 LTESRVQV---HRACRRAKWKKRKKTT 166
>MGI|MGI:1194883 [details] [associations]
symbol:Crx "cone-rod homeobox containing gene" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0043522 "leucine zipper domain
binding" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1194883 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
CTD:1406 eggNOG:NOG324074 HOGENOM:HOG000082677 HOVERGEN:HBG004028
KO:K09337 OrthoDB:EOG4NKBWG EMBL:U77615 EMBL:BC016502
IPI:IPI00117762 RefSeq:NP_001106801.1 RefSeq:NP_031796.1
UniGene:Mm.441911 ProteinModelPortal:O54751 SMR:O54751
STRING:O54751 PhosphoSite:O54751 PRIDE:O54751
Ensembl:ENSMUST00000044434 Ensembl:ENSMUST00000174318 GeneID:12951
KEGG:mmu:12951 InParanoid:O54751 NextBio:282658 Bgee:O54751
CleanEx:MM_CRX Genevestigator:O54751 GermOnline:ENSMUSG00000041578
Uniprot:O54751
Length = 299
Score = 153 (58.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 40/113 (35%), Positives = 57/113 (50%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNPGSVTP 220
QQ Q K R + G + P + P ++ ++P P
Sbjct: 98 RQQQKQQQQPPGA-QTKARPAKRKAGTSPRPSTDVCTDPLGISDSYSPSLPGP 149
>UNIPROTKB|F1NL44 [details] [associations]
symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104128
EMBL:AADN02012178 EMBL:AADN02012179 IPI:IPI00821632
Ensembl:ENSGALT00000038808 ArrayExpress:F1NL44 Uniprot:F1NL44
Length = 117
Score = 135 (52.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQV 153
+R RTSFT Q+++LE F+ T YPD++ RERLAD +PE+RIQV
Sbjct: 4 RRKRTSFTAAQLETLELVFQDTMYPDIYLRERLADATQIPESRIQV 49
>MGI|MGI:1890816 [details] [associations]
symbol:Vsx1 "visual system homeobox 1 homolog (zebrafish)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007601 "visual perception"
evidence=IMP] [GO:0042551 "neuron maturation" evidence=IGI]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0060040 "retinal bipolar
neuron differentiation" evidence=IGI;IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 MGI:MGI:1890816 GO:GO:0005634
GO:GO:0007601 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0050896 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00700000104013 GO:GO:0060040 GO:GO:0042551
eggNOG:NOG237888 HOGENOM:HOG000115909 InterPro:IPR023339
PROSITE:PS51496 CTD:30813 HOVERGEN:HBG036251 KO:K09335 OMA:WGSDHLK
OrthoDB:EOG4907B0 EMBL:AY056825 EMBL:AF395732 EMBL:AF391757
EMBL:AF391758 EMBL:BC057647 IPI:IPI00125937 PIR:JC7750
RefSeq:NP_473409.1 UniGene:Mm.207061 ProteinModelPortal:Q91V10
SMR:Q91V10 STRING:Q91V10 PhosphoSite:Q91V10 PRIDE:Q91V10
Ensembl:ENSMUST00000046095 GeneID:114889 KEGG:mmu:114889
InParanoid:Q91V10 NextBio:368909 Bgee:Q91V10 CleanEx:MM_VSX1
Genevestigator:Q91V10 GermOnline:ENSMUSG00000033080 Uniprot:Q91V10
Length = 363
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 40/96 (41%), Positives = 50/96 (52%)
Query: 66 GSVTP---ISRDDAKEHESTSDINSEPNSSADEDSQMXXXXXXXXQRNRTSFTNEQIDSL 122
G V P + E STSD +S P+ ++ +R+RT FT Q++ L
Sbjct: 128 GPVHPPPALGSQQRSESVSTSDGDS-PSEEKNDPKMSLILGKRKKRRHRTVFTAHQLEEL 186
Query: 123 EKEFERTHYPDVFARERLADKIGLPEARIQVSSINR 158
EK F HYPDV+ARE LA K LPE RIQV NR
Sbjct: 187 EKAFGEAHYPDVYAREMLAAKTELPEDRIQVWFQNR 222
>ZFIN|ZDB-GENE-080917-53 [details] [associations]
symbol:pax3b "paired box gene 3b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001356 InterPro:IPR001523 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF00292 PRINTS:PR00027
PROSITE:PS00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 ZFIN:ZDB-GENE-080917-53 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GeneTree:ENSGT00680000099553 InterPro:IPR022106 Pfam:PF12360
EMBL:CABZ01009477 IPI:IPI00633604 Ensembl:ENSDART00000015843
Uniprot:F1Q9S0
Length = 480
Score = 157 (60.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 86 NSEPNSSADE-DSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKI 144
++ P+ E +S+ +R+RT+FT +Q++ LE+ FERTHYPD++ RE LA +
Sbjct: 207 SASPSDEGSEVESEPDLPLKRKQRRSRTTFTADQLEELERAFERTHYPDIYTREELAQRA 266
Query: 145 GLPEARIQVSSINRVLR 161
L EAR+QV NR R
Sbjct: 267 KLTEARVQVWFSNRRAR 283
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 399 GGFNPSSMYSSIPQPAGMDSYNPSCLQQ 426
GGF+ +M S P Y P+ L Q
Sbjct: 302 GGFSHHAMSSLSPYQLSESPYPPAALPQ 329
>UNIPROTKB|O14813 [details] [associations]
symbol:PHOX2A "Paired mesoderm homeobox protein 2A"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0021523 "somatic
motor neuron differentiation" evidence=IEA] [GO:0021623 "oculomotor
nerve formation" evidence=IEA] [GO:0021642 "trochlear nerve
formation" evidence=IEA] [GO:0021703 "locus ceruleus development"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0043576 "regulation of respiratory gaseous exchange"
evidence=IEA] [GO:0048485 "sympathetic nervous system development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0003357 "noradrenergic neuron
differentiation" evidence=IC;NAS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IC]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0071542 EMBL:CH471076 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000790
GO:GO:0030901 GO:GO:0048485 GO:GO:0043576 GO:GO:0000977
GO:GO:0048486 GO:GO:0021523 GO:GO:0021703 GO:GO:0003357
Orphanet:45358 EMBL:AF022724 EMBL:AF022722 EMBL:AF022723
EMBL:AK290645 EMBL:BC041564 IPI:IPI00024171 RefSeq:NP_005160.2
UniGene:Hs.731565 ProteinModelPortal:O14813 SMR:O14813
STRING:O14813 PhosphoSite:O14813 PRIDE:O14813 DNASU:401
Ensembl:ENST00000298231 GeneID:401 KEGG:hsa:401 UCSC:uc001osh.4
CTD:401 GeneCards:GC11M071950 HGNC:HGNC:691 MIM:602078 MIM:602753
neXtProt:NX_O14813 PharmGKB:PA28093 eggNOG:NOG301263
HOGENOM:HOG000013060 HOVERGEN:HBG053590 InParanoid:O14813 KO:K09330
OMA:KGPLWAG OrthoDB:EOG4N30PS PhylomeDB:O14813 GenomeRNAi:401
NextBio:1681 Bgee:O14813 CleanEx:HS_PHOX2A Genevestigator:O14813
GermOnline:ENSG00000165462 Uniprot:O14813
Length = 284
Score = 152 (58.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 44/115 (38%), Positives = 60/115 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR R ++
Sbjct: 91 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNR--RAKFRKQ 148
Query: 168 EQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPHNPGSVTP 220
E+ ASA K + + + +PTP S A L P PG +P
Sbjct: 149 ERAASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPPAPGLASP 203
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 43/127 (33%), Positives = 57/127 (44%)
Query: 204 PSPAHLALPHNPGSV-TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSS 258
P P+ L + T + KE ER THYPD++ RE LA KI L EAR+QV
Sbjct: 79 PEPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWF 138
Query: 259 INRVLRNLAAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPH 316
NR R ++E+ ASA K + + + +PTP S A L P
Sbjct: 139 QNR--RAKFRKQERAASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPP 196
Query: 317 NPGSVTP 323
PG +P
Sbjct: 197 APGLASP 203
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 301 PG-STP--TPSPAHLALPHNPG 319
PG ++P +PSP +AL PG
Sbjct: 198 PGLASPRLSPSPLPVALGSGPG 219
>UNIPROTKB|I3LAG7 [details] [associations]
symbol:PAX3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0060594 "mammary
gland specification" evidence=IEA] [GO:0048663 "neuron fate
commitment" evidence=IEA] [GO:0048066 "developmental pigmentation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
[GO:0007507 "heart development" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001356
InterPro:IPR001523 InterPro:IPR009057 Pfam:PF00046 Pfam:PF00292
PRINTS:PR00027 PROSITE:PS00034 PROSITE:PS50071 PROSITE:PS51057
SMART:SM00351 SMART:SM00389 GO:GO:0005634 GO:GO:0007507
GO:GO:0008284 GO:GO:0008283 GO:GO:0001755 GO:GO:0043565
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000122
GO:GO:0007517 GO:GO:0001843 GO:GO:0021527 GO:GO:0048663
GO:GO:0048066 GO:GO:0060594 GeneTree:ENSGT00680000099553
InterPro:IPR022106 Pfam:PF12360 OMA:VHQSTLP
Ensembl:ENSSSCT00000032547 Uniprot:I3LAG7
Length = 483
Score = 157 (60.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 83 SDINSEPNSS--ADEDSQMXXXXXXXXQRNRTSFTNEQIDSLEKEFERTHYPDVFARERL 140
S+ S P S +D DS+ +R+RT+FT EQ++ LE+ FERTHYPD++ RE L
Sbjct: 191 SERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREEL 250
Query: 141 ADKIGLPEARIQ 152
A + L EAR+Q
Sbjct: 251 AQRAKLTEARVQ 262
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 3 VSSINRVLRNLAAQ-KEQQASAHNQTSE 29
VSSI+R+LR+ + +E++A + +E
Sbjct: 149 VSSISRILRSKFGKGEEEEADLERKEAE 176
>ZFIN|ZDB-GENE-010403-1 [details] [associations]
symbol:crx "cone-rod homeobox" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001654 "eye
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0046671 "negative regulation of retinal cell
programmed cell death" evidence=IMP] [GO:0042462 "eye photoreceptor
cell development" evidence=IMP] InterPro:IPR001356
InterPro:IPR003025 InterPro:IPR009057 InterPro:IPR013851
InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529 PRINTS:PR01255
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-010403-1 GO:GO:0005634 GO:GO:0003677 GO:GO:0007601
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0046671 GO:GO:0042462 CTD:1406 GeneTree:ENSGT00700000104128
HOGENOM:HOG000082677 HOVERGEN:HBG004028 HSSP:P06601
eggNOG:NOG245767 EMBL:BX927323 EMBL:BC059653 EMBL:AF503443
EMBL:AY703035 EMBL:AY703034 EMBL:AY703038 EMBL:AY703036
EMBL:AY703037 IPI:IPI00500108 RefSeq:NP_694419.1 UniGene:Dr.14325
SMR:Q8JIZ3 STRING:Q8JIZ3 Ensembl:ENSDART00000037879 GeneID:81881
KEGG:dre:81881 InParanoid:Q8JIZ3 OMA:DYKDQQA NextBio:20934175
Uniprot:Q8JIZ3
Length = 281
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 44/119 (36%), Positives = 61/119 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q+D LE F +T YPD+F RE +A KI LPE+R+QV NR R Q+
Sbjct: 39 RRERTTFTRTQLDILEALFTKTRYPDIFMREEVALKINLPESRVQVWFKNR--RAKCRQQ 96
Query: 168 EQQASAHNQTSETVYDKLRM--FNGQPGWAWYPGSTPTPS-PAHLALPHNPGSV-TPIS 222
+QQ S + PG + + PTP+ P ++ P SV +P S
Sbjct: 97 QQQTSGQPKPRPPKKKSSPPPDLTSDPGTSSSVVAAPTPTVPPSVSAGTAPVSVWSPTS 155
>ZFIN|ZDB-GENE-050417-97 [details] [associations]
symbol:dmbx1b "diencephalon/mesencephalon homeobox
1b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0050767 "regulation of neurogenesis"
evidence=IGI;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050417-97 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726 GO:GO:0060041
GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 GO:GO:0050767 HSSP:P06601
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OrthoDB:EOG4BCDNN EMBL:DQ317638 EMBL:BC093284 IPI:IPI00487260
RefSeq:NP_001017625.1 UniGene:Dr.91498 ProteinModelPortal:Q566X8
SMR:Q566X8 Ensembl:ENSDART00000026693 GeneID:550288 KEGG:dre:550288
CTD:550288 InParanoid:Q566X8 OMA:EDNADRE NextBio:20879549
Bgee:Q566X8 Uniprot:Q566X8
Length = 369
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/81 (44%), Positives = 50/81 (61%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR----NL 163
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 67 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 126
Query: 164 AAQKEQQASAHNQTSETVYDK 184
+ QKEQ +E D+
Sbjct: 127 SLQKEQLQRLKEAGTEGAQDE 147
>ZFIN|ZDB-GENE-020117-1 [details] [associations]
symbol:dmbx1a "diencephalon/mesencephalon homeobox
1a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0030901 "midbrain development" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0050767
"regulation of neurogenesis" evidence=IGI;IMP] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0001654 "eye
development" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0007420 "brain
development" evidence=IEP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 ZFIN:ZDB-GENE-020117-1 GO:GO:0005634 GO:GO:0045892
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0051726 GO:GO:0060041 GO:GO:0030901
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 GO:GO:0050767 HSSP:P06601
HOGENOM:HOG000261650 HOVERGEN:HBG061416 OrthoDB:EOG4BCDNN
EMBL:AF398525 EMBL:AF398526 EMBL:AY071922 IPI:IPI00489948
IPI:IPI00504672 RefSeq:NP_694509.1 RefSeq:NP_835457.2
UniGene:Dr.78986 ProteinModelPortal:Q8JI10 SMR:Q8JI10 STRING:Q8JI10
Ensembl:ENSDART00000017173 Ensembl:ENSDART00000128535 GeneID:142987
KEGG:dre:142987 CTD:142987 eggNOG:COG5576 InParanoid:Q8JI10
OMA:SHHAQQV NextBio:20797050 ArrayExpress:Q8JI10 Bgee:Q8JI10
Uniprot:Q8JI10
Length = 388
Score = 155 (59.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 50/124 (40%), Positives = 65/124 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR----NL 163
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 72 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 131
Query: 164 AAQKEQ---QASAHNQTSETVYDK------LRMFNGQPGWAWYPGSTPTPSPAHL-ALPH 213
+ QKEQ Q + DK L + N QP P ST + S A PH
Sbjct: 132 SLQKEQLQKQKDVSTDGALAASDKDEAPSTLNLEN-QP-----PSSTSSSSSMEAEAAPH 185
Query: 214 NPGS 217
GS
Sbjct: 186 ALGS 189
>UNIPROTKB|F1SPT6 [details] [associations]
symbol:ISX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00700000104256
OMA:CCEAPKK EMBL:FP565732 Ensembl:ENSSSCT00000000161 Uniprot:F1SPT6
Length = 242
Score = 149 (57.5 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT EQ+ LEK F THYPDV R +LA +I LPEAR+Q+ N+ + ++
Sbjct: 81 RRIRTTFTTEQLQELEKIFHFTHYPDVHIRNQLAARINLPEARVQIWFQNQRAKRRKQER 140
Query: 168 EQQASAHNQTSE 179
A +Q SE
Sbjct: 141 TGSLGAPSQLSE 152
>WB|WBGene00000458 [details] [associations]
symbol:ceh-37 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0009299 "mRNA transcription" evidence=ISS] [GO:0048665 "neuron
fate specification" evidence=IMP] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000781 "chromosome, telomeric
region" evidence=IDA] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0003700 GO:GO:0006357
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008301 GO:GO:0042048
GO:GO:0000784 GO:GO:0048665 GO:GO:0016233 GO:GO:0042162
GeneTree:ENSGT00700000104128 GO:GO:0009299 EMBL:Z81046 PIR:T19813
RefSeq:NP_510366.1 ProteinModelPortal:Q93356 SMR:Q93356
STRING:Q93356 EnsemblMetazoa:C37E2.5 GeneID:181530
KEGG:cel:CELE_C37E2.5 UCSC:C37E2.5 CTD:181530 WormBase:C37E2.5
eggNOG:NOG245767 HOGENOM:HOG000020812 InParanoid:Q93356 OMA:ENLFNET
NextBio:914324 Uniprot:Q93356
Length = 278
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+++ +Q++ LE F T YPDVFARER+AD+I L E+RIQV NR + +K
Sbjct: 42 RRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEK 101
Query: 168 EQQASAHNQTSETVYDKLR---MFNGQPGWAWYPGSTP 202
++ ++ ++ E + + + +G+P PG P
Sbjct: 102 QKPKRSNEKSQEHKSEDQQQTDVLDGEPLKGGSPGYQP 139
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F T YPDVFARER+AD+I L E+RIQV NR + +K++ ++ ++ E +
Sbjct: 60 FNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEKQKPKRSNEKSQEHKSEDQ 119
Query: 289 R---MFNGQPGWAWYPGSTP 305
+ + +G+P PG P
Sbjct: 120 QQTDVLDGEPLKGGSPGYQP 139
>UNIPROTKB|Q93356 [details] [associations]
symbol:ceh-37 "Homeobox protein ceh-37" species:6239
"Caenorhabditis elegans" [GO:0016233 "telomere capping"
evidence=NAS] [GO:0032200 "telomere organization" evidence=NAS]
[GO:0008301 "DNA binding, bending" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0042162
"telomeric DNA binding" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0042048 "olfactory
behavior" evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0003700 GO:GO:0006357 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008301 GO:GO:0042048 GO:GO:0000784
GO:GO:0048665 GO:GO:0016233 GO:GO:0042162
GeneTree:ENSGT00700000104128 GO:GO:0009299 EMBL:Z81046 PIR:T19813
RefSeq:NP_510366.1 ProteinModelPortal:Q93356 SMR:Q93356
STRING:Q93356 EnsemblMetazoa:C37E2.5 GeneID:181530
KEGG:cel:CELE_C37E2.5 UCSC:C37E2.5 CTD:181530 WormBase:C37E2.5
eggNOG:NOG245767 HOGENOM:HOG000020812 InParanoid:Q93356 OMA:ENLFNET
NextBio:914324 Uniprot:Q93356
Length = 278
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+++ +Q++ LE F T YPDVFARER+AD+I L E+RIQV NR + +K
Sbjct: 42 RRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEK 101
Query: 168 EQQASAHNQTSETVYDKLR---MFNGQPGWAWYPGSTP 202
++ ++ ++ E + + + +G+P PG P
Sbjct: 102 QKPKRSNEKSQEHKSEDQQQTDVLDGEPLKGGSPGYQP 139
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 229 FERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQKEQQASAHNQTSETVYDKL 288
F T YPDVFARER+AD+I L E+RIQV NR + +K++ ++ ++ E +
Sbjct: 60 FNETQYPDVFARERVADQIRLQESRIQVWFKNRRAKYRLQEKQKPKRSNEKSQEHKSEDQ 119
Query: 289 R---MFNGQPGWAWYPGSTP 305
+ + +G+P PG P
Sbjct: 120 QQTDVLDGEPLKGGSPGYQP 139
>UNIPROTKB|F1NEA7 [details] [associations]
symbol:DMBX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000122 GO:GO:0048589 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104128 OMA:SHHAQQV
EMBL:AADN02012643 IPI:IPI00812020 Ensembl:ENSGALT00000033114
Uniprot:F1NEA7
Length = 367
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLR----NL 163
+R+RT+FT +Q+++LEK F++THYPDV RERLA LPEAR+QV NR +
Sbjct: 72 RRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRRAKFRKKQR 131
Query: 164 AAQKEQ 169
+ QKEQ
Sbjct: 132 SLQKEQ 137
>MGI|MGI:106633 [details] [associations]
symbol:Phox2a "paired-like homeobox 2a" species:10090 "Mus
musculus" [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003357 "noradrenergic neuron differentiation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0021523 "somatic motor neuron differentiation" evidence=IMP]
[GO:0021623 "oculomotor nerve formation" evidence=IMP] [GO:0021642
"trochlear nerve formation" evidence=IMP] [GO:0021703 "locus
ceruleus development" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0048485 "sympathetic nervous system development" evidence=IMP]
[GO:0048486 "parasympathetic nervous system development"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:106633 GO:GO:0005634 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0030901 GO:GO:0021623 GO:GO:0048485
GO:GO:0043576 GO:GO:0000977 GO:GO:0021523 GO:GO:0021703
GO:GO:0003357 GeneTree:ENSGT00700000104256 CTD:401 eggNOG:NOG301263
HOGENOM:HOG000013060 HOVERGEN:HBG053590 KO:K09330 OMA:KGPLWAG
OrthoDB:EOG4N30PS EMBL:X75014 IPI:IPI00121059 PIR:I48713
RefSeq:NP_032913.1 UniGene:Mm.5028 ProteinModelPortal:Q62066
SMR:Q62066 STRING:Q62066 PhosphoSite:Q62066 PRIDE:Q62066
Ensembl:ENSMUST00000008090 GeneID:11859 KEGG:mmu:11859
UCSC:uc009ipe.2 InParanoid:Q62066 NextBio:279855 Bgee:Q62066
CleanEx:MM_PHOX2A Genevestigator:Q62066
GermOnline:ENSMUSG00000007946 GO:GO:0021642 Uniprot:Q62066
Length = 280
Score = 151 (58.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 44/115 (38%), Positives = 60/115 (52%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT+ Q+ LE+ F THYPD++ RE LA KI L EAR+QV NR R ++
Sbjct: 91 RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNR--RAKFRKQ 148
Query: 168 EQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPHNPGSVTP 220
E+ ASA T K + + + +PTP S A L P P +P
Sbjct: 149 ERAASAKGAAGATGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPPAPSLASP 203
Score = 113 (44.8 bits), Expect = 0.00074, P = 0.00074
Identities = 43/127 (33%), Positives = 57/127 (44%)
Query: 204 PSPAHLALPHNPGSV-TPISRDDAKEFER----THYPDVFARERLADKIGLPEARIQVSS 258
P P+ L + T + KE ER THYPD++ RE LA KI L EAR+QV
Sbjct: 79 PEPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWF 138
Query: 259 INRVLRNLAAQKEQQASAHNQTSETVYDKLRM-FNGQPGWAWYPGSTPTP-SPAHLALPH 316
NR R ++E+ ASA T K + + + +PTP S A L P
Sbjct: 139 QNR--RAKFRKQERAASAKGAAGATGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPP 196
Query: 317 NPGSVTP 323
P +P
Sbjct: 197 APSLASP 203
>FB|FBgn0085396 [details] [associations]
symbol:CG34367 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:AE014134 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GO:GO:0000976 GeneTree:ENSGT00700000104279
UniGene:Dm.26780 GeneID:5740879 KEGG:dme:Dmel_CG34367
FlyBase:FBgn0085396 GenomeRNAi:5740879 NextBio:20891918
RefSeq:NP_001097140.1 ProteinModelPortal:A8DYR8 SMR:A8DYR8
EnsemblMetazoa:FBtr0112592 UCSC:CG34367-RC InParanoid:A8DYR8
OrthoDB:EOG4M640D PhylomeDB:A8DYR8 Bgee:A8DYR8 Uniprot:A8DYR8
Length = 420
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 85 INSEPNSSADEDSQMXXXXXXXXQR-NRTSFTNEQIDSLEKEFERTHYPDVFARERLADK 143
++ EP+ + + + QR +RT+FT +Q++ LE+ FE THYPD F RE L+ +
Sbjct: 169 VSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQR 228
Query: 144 IGLPEARIQVSSINR 158
+GL EAR+QV NR
Sbjct: 229 LGLSEARVQVWFQNR 243
>UNIPROTKB|Q9XSK0 [details] [associations]
symbol:CRX "Cone-rod homeobox protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043522 "leucine
zipper domain binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
EMBL:AF154123 IPI:IPI00695402 RefSeq:NP_776329.1 UniGene:Bt.283
ProteinModelPortal:Q9XSK0 SMR:Q9XSK0 STRING:Q9XSK0 PRIDE:Q9XSK0
Ensembl:ENSBTAT00000028232 GeneID:280756 KEGG:bta:280756 CTD:1406
eggNOG:NOG324074 GeneTree:ENSGT00700000104128 HOGENOM:HOG000082677
HOVERGEN:HBG004028 InParanoid:Q9XSK0 KO:K09337 OMA:QTKARPA
OrthoDB:EOG4NKBWG NextBio:20804923 Uniprot:Q9XSK0
Length = 299
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQTSETVYDKLRMFNGQPGWAWYPGSTPTPSPAHLALPHNP 215
QQ Q K R + G + + P P ++ ++P
Sbjct: 98 RQQQKQQQQPPGA-QAKARPAKRKAGTSPRSSTDVCPDPLGISDSYSP 144
>UNIPROTKB|F1RLA3 [details] [associations]
symbol:CRX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043522 "leucine
zipper domain binding" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR013851 InterPro:IPR017970 Pfam:PF00046 Pfam:PF03529
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0060041
GeneTree:ENSGT00700000104128 KO:K09337 OMA:QTKARPA
UniGene:Ssc.17775 EMBL:FP102640 RefSeq:XP_003127313.1
Ensembl:ENSSSCT00000003465 GeneID:100520079 KEGG:ssc:100520079
Uniprot:F1RLA3
Length = 299
Score = 151 (58.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 33/69 (47%), Positives = 43/69 (62%)
Query: 108 QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQVSSINRVLRNLAAQK 167
+R RT+FT Q++ LE F +T YPDV+ARE +A KI LPE+R+QV NR R Q+
Sbjct: 40 RRERTTFTRSQLEELESLFAKTQYPDVYAREEVALKINLPESRVQVWFKNR--RAKCRQQ 97
Query: 168 EQQASAHNQ 176
QQ Q
Sbjct: 98 RQQQKQQQQ 106
WARNING: HSPs involving 209 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.126 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 490 405 0.0010 117 3 11 23 0.46 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 459
No. of states in DFA: 606 (64 KB)
Total size of DFA: 239 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.90u 0.09s 39.99t Elapsed: 00:00:03
Total cpu time: 39.95u 0.09s 40.04t Elapsed: 00:00:03
Start: Thu Aug 15 13:06:38 2013 End: Thu Aug 15 13:06:41 2013
WARNINGS ISSUED: 2