RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2184
(459 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 204 bits (519), Expect = 8e-62
Identities = 101/384 (26%), Positives = 155/384 (40%), Gaps = 48/384 (12%)
Query: 69 PLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDP 128
PLH+A++ G++ IV+ LL G + N+ ET LH AA+ GHT V LL++
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGA---SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 129 TIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHS 188
+ +T L AA+ G V L+ + + L A+
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLE-NNANPNLATTAGHTPLHIAAREGHVETVLAL 118
Query: 189 LRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNV 248
L + G++ LH AA G + ELLL +A N G +PLH+A N+
Sbjct: 119 LEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 178
Query: 249 DIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETAL 308
DIV++LL G + + + T LH AA+ V LL++ + + T L
Sbjct: 179 DIVKLLLPRG---GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPL 235
Query: 309 DLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGL 368
LAAQ G E V L+ + +PLHL ++ GH V L++ G+
Sbjct: 236 HLAAQEGHAEMVALLLSKQANGNLGNKSG-------LTPLHLVAQEGHVPVADVLIKHGV 288
Query: 369 DVNIRTASG----------------------------------TALHEAALCGKLEVVKT 394
V+ T G + LH+AA G ++V
Sbjct: 289 MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTL 348
Query: 395 LLEHGADLRIIDSKHNTVLDLLKQ 418
LL++GA + S T L + K+
Sbjct: 349 LLKNGASPNEVSSDGTTPLAIAKR 372
Score = 159 bits (402), Expect = 7e-45
Identities = 98/317 (30%), Positives = 145/317 (45%), Gaps = 24/317 (7%)
Query: 104 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQ 163
T LH A+ GH P+V LL+ P + N + ET L +AA+ G E L++ + +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-NKAKVN 60
Query: 164 AYNARAQSTLFPASPLHLASRNGHS------LRRGPGANVQDSSGYSALHHAALNGHKEI 217
A Q +PLH A+R GH+ L N+ ++G++ LH AA GH E
Sbjct: 61 AKAKDDQ------TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 114
Query: 218 VELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHC 277
V LL EAS + KG +PLH+AA G V + +LL + N K+ T LH
Sbjct: 115 VLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD---AHPNAAGKNGLTPLHV 171
Query: 278 AAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNAR 337
A + + +V LL P T L +AA+ ++E L+Q +
Sbjct: 172 AVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE-------VARSLLQYGGSA 224
Query: 338 AQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLL 396
++ +PLHLA++ GH +VA LL + N+ SG T LH A G + V L+
Sbjct: 225 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 284
Query: 397 EHGADLRIIDSKHNTVL 413
+HG + T L
Sbjct: 285 KHGVMVDATTRMGYTPL 301
Score = 158 bits (399), Expect = 3e-44
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 19/275 (6%)
Query: 55 NEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGH 114
EAS + KG +PLH+AA G V + +LL + N K+ T LH A + +
Sbjct: 121 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA---HPNAAGKNGLTPLHVAVHHNN 177
Query: 115 TPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLF 174
+V LL P T L +AA+ ++E L+Q + ++
Sbjct: 178 LDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEV-------ARSLLQYGGSANAESVQ 230
Query: 175 PASPLHLASRNGHS------LRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEAST 228
+PLHLA++ GH+ L + N+ + SG + LH A GH + ++L+ +
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
Query: 229 NIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVS 288
+ G +PLH+A+ GN+ +V+ +VN TK + LH AAQ GHT +V+
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVK---FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 347
Query: 289 QLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 323
LL++ P +S T L +A + G + D L
Sbjct: 348 LLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 140 bits (354), Expect = 6e-38
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 205 ALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNV 264
LH A+ GH IV+ LL AS N+ + K +PLH+AA G+ ++ + LL + V
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA---KV 59
Query: 265 NLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 324
N KD++T LHCAA+ GHT +V LLE++ +P + + T L +AA+ G +ETV L+
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 119
Query: 325 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEA 383
PLH+A++ G V LL+ N +G T LH A
Sbjct: 120 EKEASQACMTKKGFT-------PLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVA 172
Query: 384 ALCGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVH 425
L++VK LL G T L + + V
Sbjct: 173 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 214
Score = 126 bits (316), Expect = 9e-33
Identities = 81/271 (29%), Positives = 119/271 (43%), Gaps = 18/271 (6%)
Query: 18 LLEAARNGNIQVVEKILSQRAK-----RSGPLA---------REIVELLLTNEASTNIVD 63
L AA+ G ++V E +L + A ++G +IV+LLL S +
Sbjct: 136 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 195
Query: 64 TKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLE 123
G +PLH+AA V++ R LL + + N + T LH AAQ GH +V+ LL
Sbjct: 196 WNGYTPLHIAAKQNQVEVARSLLQY---GGSANAESVQGVTPLHLAAQEGHAEMVALLLS 252
Query: 124 HSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLAS 183
+ + N T L L AQ G + D L++ H ++ A + L AS
Sbjct: 253 KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIK 311
Query: 184 RNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAA 243
L+ N + GYS LH AA GH +IV LLL N AS N V + G++PL +A
Sbjct: 312 LVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 371
Query: 244 WTGNVDIVRVLLCHGPSVPNVNLMTKDNETA 274
G + + VL V + K +
Sbjct: 372 RLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 133 bits (334), Expect = 3e-36
Identities = 70/321 (21%), Positives = 113/321 (35%), Gaps = 56/321 (17%)
Query: 101 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH-ETALDLAAQYGRLETVDTLVRTHP 159
++ L A Q +V QLLE + + T L A Q R + V+ L+R
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 160 GLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVE 219
+ A L A+ L +G N D G++A AA+ G + ++
Sbjct: 64 DPVLRKKNGATPFLL-AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122
Query: 220 LLLTNEASTNIVDT----------KGSSPLHLAAWTGNVDIVRVLLCHGPSVPNV--NLM 267
L A+ N+ G++ L AA G+V+++++LL + N N+
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182
Query: 268 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 327
AL + + LL+H D +R R +T
Sbjct: 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT--------------------- 221
Query: 328 PGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLL-QAGLDVNIRTASG-TALHEAAL 385
PL LA H +V RLL Q +++N + G TAL A
Sbjct: 222 -------------------PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE 262
Query: 386 CGKLEVVKTLLEHGADLRIID 406
++ + L + GA D
Sbjct: 263 LKLKKIAELLCKRGASTDCGD 283
Score = 130 bits (326), Expect = 3e-35
Identities = 67/305 (21%), Positives = 112/305 (36%), Gaps = 39/305 (12%)
Query: 12 MGKDQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTK-GSSPL 70
+ + L++A +N ++ ++V+ LL A+ N + + G +PL
Sbjct: 3 VEDNHLLIKAVQNEDV-------------------DLVQQLLEGGANVNFQEEEGGWTPL 43
Query: 71 HLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTI 130
H A DIV +LL HG AA G ++ L D
Sbjct: 44 HNAVQMSREDIVELLLRHGADPVLRKKNGATPF---LLAAIAGSVKLLKLFLSKGADVNE 100
Query: 131 RNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFP---ASPLHLASRNGH 187
+ TA AA YG+++ + L + + + A+ L A+ GH
Sbjct: 101 CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 160
Query: 188 S-------LRRGPGANVQDSSGYSALHHAALNG----HKEIVELLLTNEASTNIVDTKGS 236
G N D+ G +AL HA L+ + I LLL + A N+ +G
Sbjct: 161 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK 220
Query: 237 SPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCD 296
+PL LA ++ +V+ LL +N D +TAL A + + L +
Sbjct: 221 TPLILAVEKKHLGLVQRLLEQEHI--EINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278
Query: 297 PTIRN 301
+
Sbjct: 279 TDCGD 283
Score = 108 bits (270), Expect = 2e-27
Identities = 69/258 (26%), Positives = 106/258 (41%), Gaps = 24/258 (9%)
Query: 177 SPLHLASRNGHS------LRRGPGANVQDS-SGYSALHHAALNGHKEIVELLLTNEASTN 229
L A +N L G N Q+ G++ LH+A ++IVELLL + A
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 230 IVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQ 289
+ G++P LAA G+V ++++ L G V + TA AA YG +
Sbjct: 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY---GFTAFMEAAVYGKVKALKF 123
Query: 290 LLEHSCDPTIRNSRHE----------TALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQ 339
L + + +R E TAL AA+ G +E + L+ + A + +
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183
Query: 340 STLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLLEH 398
+ L A + ++ LL G DVN+R G T L A L +V+ LLE
Sbjct: 184 NALIHALLSS--DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 241
Query: 399 -GADLRIIDSKHNTVLDL 415
++ DS T L L
Sbjct: 242 EHIEINDTDSDGKTALLL 259
Score = 100 bits (250), Expect = 1e-24
Identities = 59/231 (25%), Positives = 88/231 (38%), Gaps = 16/231 (6%)
Query: 195 ANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTK-GSSPLHLAAWTGNVDIVRV 253
A V+D+ L A N ++V+ LL A+ N + + G +PLH A DIV +
Sbjct: 1 AAVEDNH---LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVEL 57
Query: 254 LLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQ 313
LL HG AA G ++ L D + TA AA
Sbjct: 58 LLRHGADPVLRKKNGATPF---LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAV 114
Query: 314 YGRLETVDTLVRTHPGLIQAYNARAQSTLFP---ASPLHLASRNGHRSVVARLL-QAGLD 369
YG+++ + L + + + A+ L A+ GH V+ LL + G D
Sbjct: 115 YGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 174
Query: 370 VNIRTASGTALHEAALCGK-----LEVVKTLLEHGADLRIIDSKHNTVLDL 415
VN G AL + LL+HGAD+ + + T L L
Sbjct: 175 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLIL 225
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 127 bits (319), Expect = 1e-33
Identities = 55/396 (13%), Positives = 95/396 (23%), Gaps = 83/396 (20%)
Query: 26 NIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVL 85
NI+ E R + NE S + K + + L + ++L
Sbjct: 6 NIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLL 65
Query: 86 LCHGPSV--------PNVNLMTKDNETALHCAAQYGHTPV---VSQLLEHSCDPTIRNSR 134
+ + + +E AA G + + LL + +
Sbjct: 66 CLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE 125
Query: 135 HETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPG 194
+ A LAA+ G L ++ L P
Sbjct: 126 NYQAFRLAAENGHLHVLNRL----------------------------------CELAPT 151
Query: 195 ANVQDSS--GYSALHHAALNGHKEIVELLLTNEASTN---IVDTKGSSPLHLAAWTGNVD 249
+ Y A AA NGH ++ L + I + A G+ +
Sbjct: 152 EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 211
Query: 250 IVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALD 309
++ LL + A +YG V + H R A
Sbjct: 212 VINFLLDCPVML----------AYAEIHEFEYGEKYVNPFIARHVN----RLKEMHDAFK 257
Query: 310 LAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLD 369
L+ G + V + + L + + LL
Sbjct: 258 LSNPDGVFDLVT-------------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGI 304
Query: 370 VNIRTASG------TALHEAALCGKLEVVKTLLEHG 399
+ + L A G LL
Sbjct: 305 KALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340
Score = 125 bits (313), Expect = 1e-32
Identities = 57/367 (15%), Positives = 105/367 (28%), Gaps = 62/367 (16%)
Query: 1 MEELQCVVFSVMGKDQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTN 60
+ + + ++ K+ + N++ V ++L + +
Sbjct: 32 ISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYY-------AHYNRNAKQLWSDAH 84
Query: 61 IVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQ 120
K +AA TG + L S V ++ +N A AA+ GH V+++
Sbjct: 85 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 144
Query: 121 LLEHSCDPTIRNSRH--ETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASP 178
L E + + + A LAA+ G L ++ L P A
Sbjct: 145 LCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAM------------- 191
Query: 179 LHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSP 238
+Q + Y+ A GH ++ LL
Sbjct: 192 ------------------IQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA-------YA 226
Query: 239 LHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPT 298
G + + H K+ A + G +V++
Sbjct: 227 EIHEFEYGEKYVNPFIARHVN-------RLKEMHDAFKLSNPDGVFDLVTK------SEC 273
Query: 299 IRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRS 358
++ L L+ + L+ I+A A L LA R G++
Sbjct: 274 LQGFYMLRNLIRRNDEVLLDDIRFLLSI--PGIKALAPTATIPGDANELLRLALRLGNQG 331
Query: 359 VVARLLQ 365
A LL
Sbjct: 332 ACALLLS 338
Score = 119 bits (300), Expect = 6e-31
Identities = 52/365 (14%), Positives = 98/365 (26%), Gaps = 69/365 (18%)
Query: 60 NIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHC--AAQYGHTPV 117
NI + + L L W ++ H S ++LMT + A+H V
Sbjct: 6 NIENYENDPQLRLIPWILWENLF----QHFISANELSLMTLSYKEAIHIFLPGTKNMEQV 61
Query: 118 VSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPAS 177
L + + +
Sbjct: 62 RQLLCLYYAHYNRNAKQLWSDAHKKGIKSE-----------------------------V 92
Query: 178 PLHLASRNGHS---------LRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEAST 228
+A+ G S L V + Y A AA NGH ++ L +
Sbjct: 93 ICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE 152
Query: 229 NIVDTK--GSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPV 286
+ + LAA G++ ++ L P+ + ++ A GH V
Sbjct: 153 IMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNV 212
Query: 287 VSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPAS 346
++ LL+ A +YG + R L + ++A
Sbjct: 213 INFLLDCPVML-------AYAEIHEFEYGEKYVNPFIARHVNRLKEMHDA---------- 255
Query: 347 PLHLASRNGHRSVVARLLQAGLDVNIRTASGTALHEAALCGKLEVVKTLLEHGADLRIID 406
L++ +G +V + + L L+ ++ LL +
Sbjct: 256 -FKLSNPDGVFDLVTKSECLQGFYML-----RNLIRRNDEVLLDDIRFLLSIPGIKALAP 309
Query: 407 SKHNT 411
+
Sbjct: 310 TATIP 314
Score = 99 bits (248), Expect = 6e-24
Identities = 44/235 (18%), Positives = 74/235 (31%), Gaps = 30/235 (12%)
Query: 206 LHHAALNGHKEIVELLLTNEASTNIVD-----------TKGSSPLHLAAWTGNVDIVRVL 254
+ +++ +LL A N K +AA TG + L
Sbjct: 50 IFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTL 109
Query: 255 LCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH--ETALDLAA 312
S V ++ +N A AA+ GH V+++L E + + + A LAA
Sbjct: 110 CLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAA 169
Query: 313 QYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNI 372
+ G L ++ L P + A GH +V+ LL + +
Sbjct: 170 ENGHLHVLNRLCELAPTE----ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA- 224
Query: 373 RTASGTALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDI 427
A G+ V + H + + D K P V D+
Sbjct: 225 -----YAEIHEFEYGEKYVNPFIARHVN-------RLKEMHDAFKLSNPDGVFDL 267
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 121 bits (303), Expect = 3e-32
Identities = 53/264 (20%), Positives = 80/264 (30%), Gaps = 22/264 (8%)
Query: 62 VDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQL 121
V G + LHLA + + LL ++L +TALH AA G V +L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 122 LEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHL 181
+ TAL LA + L++ P + + + +P
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP--- 121
Query: 182 ASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHL 241
D+S A + N E + G +PLH+
Sbjct: 122 -----------------DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV 164
Query: 242 AAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN 301
A + ++VR+ T LH A + V+ LL+ DPT R
Sbjct: 165 AVIHKDAEMVRL--LRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM 222
Query: 302 SRHETALDLAAQYGRLETVDTLVR 325
T L A L
Sbjct: 223 YGGRTPLGSALLRPNPILARLLRA 246
Score = 99.0 bits (245), Expect = 4e-24
Identities = 62/247 (25%), Positives = 85/247 (34%), Gaps = 27/247 (10%)
Query: 177 SPLHLASRNGHS------LRRGPGA---NVQDSSGYSALHHAALNGHKEIVELLLTNEAS 227
+ LHLA + H L G ++Q+ G +ALH AA+ G VE L A
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 228 TNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMT-----------KDNETALH 276
+ + G + LHLA VLL PS P T + A
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 277 CAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNA 336
+ + + N T L +A + E V L L +
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPT 190
Query: 337 RAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTL 395
++ PLHLA SV+ LL+AG D R G T L A L + + L
Sbjct: 191 CGRT------PLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL 244
Query: 396 LEHGADL 402
HGA
Sbjct: 245 RAHGAPE 251
Score = 99.0 bits (245), Expect = 4e-24
Identities = 45/229 (19%), Positives = 65/229 (28%), Gaps = 46/229 (20%)
Query: 231 VDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQL 290
V G + LHLA + + LL ++L +TALH AA G V +L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 291 LEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP---------GLIQAYNARAQST 341
+ TAL LA + L++ P L Q+ + ++
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124
Query: 342 LFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG------------------------ 377
PA + N R L + G
Sbjct: 125 HAPA--AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182
Query: 378 -----------TALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDL 415
T LH A V++ LL+ GAD T L
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGS 231
Score = 65.1 bits (157), Expect = 2e-12
Identities = 44/265 (16%), Positives = 70/265 (26%), Gaps = 62/265 (23%)
Query: 8 VFSVMGKDQD--LLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTK 65
VF + +D D L A + + ++ +L A ++ +
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSA----------------GHEYLDLQNDL 44
Query: 66 GSSPLHLAAWTGNV---------------------------------DIVRVLLCHGPSV 92
G + LHLAA G VLL PS
Sbjct: 45 GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104
Query: 93 PNVNLMT-----------KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDL 141
P T + A + + + N T L +
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHV 164
Query: 142 AAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSS 201
A + E V L L + ++ L A AS L+ G +
Sbjct: 165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYG 224
Query: 202 GYSALHHAALNGHKEIVELLLTNEA 226
G + L A L + + LL + A
Sbjct: 225 GRTPLGSALLRPNPILARLLRAHGA 249
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 109 bits (273), Expect = 2e-28
Identities = 48/224 (21%), Positives = 83/224 (37%), Gaps = 6/224 (2%)
Query: 102 NETALHCAAQYGHTPVVSQLL-EHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 160
+ + A G + + + T + TAL A G E V+ L++
Sbjct: 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 62
Query: 161 LIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVEL 220
+ + S L A+ L +G N + +G + LH+AA EI +
Sbjct: 63 -VNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVM 121
Query: 221 LLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQ 280
LL A+ + D ++ +H AA GN+ ++ +LL + S + + T LH A
Sbjct: 122 LLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD---TEGNTPLHLACD 178
Query: 281 YGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 324
L+ I N +T L +A G + +V
Sbjct: 179 EERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
Score = 100 bits (248), Expect = 6e-25
Identities = 62/278 (22%), Positives = 104/278 (37%), Gaps = 59/278 (21%)
Query: 15 DQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAA 74
+ + A +G ++ E+ E +L +++ D + LH A
Sbjct: 4 NLMVCNLAYSGKLE------------------ELKESILADKSLATRTDQDSRTALHWAC 45
Query: 75 WTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR 134
G+ +IV VN + LH AA G +V LL N
Sbjct: 46 SAGHTEIVE---FLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQN 102
Query: 135 HETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPG 194
T L AA R E L L G
Sbjct: 103 GCTPLHYAASKNRHEIAVML----------------------------------LEGGAN 128
Query: 195 ANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVL 254
+ +D +A+H AA G+ +++ +LL +ASTNI DT+G++PLHLA V+ ++L
Sbjct: 129 PDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLL 188
Query: 255 LCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLE 292
+ G ++ + K+ +T L A G ++ +++E
Sbjct: 189 VSQG---ASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222
Score = 96.6 bits (239), Expect = 1e-23
Identities = 63/227 (27%), Positives = 88/227 (38%), Gaps = 19/227 (8%)
Query: 179 LHLASRNGHS-------LRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIV 231
+ + +G L A D +ALH A GH EIVE LL N
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 232 DTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLL 291
D G SPLH+AA G +IV+ LL G VN + ++ T LH AA + LL
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGA---QVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 292 EHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLA 351
E +P ++ TA+ AA G L+ + L+ +PLHLA
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEG-------NTPLHLA 176
Query: 352 SRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLLE 397
L+ G + I T L A G ++K ++E
Sbjct: 177 CDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKG-GLGLILKRMVE 222
Score = 89.6 bits (221), Expect = 3e-21
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 12/212 (5%)
Query: 206 LHHAALNGH-KEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNV 264
+ + A +G +E+ E +L +++ D + LH A G+ +IV V
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVE---FLLQLGVPV 63
Query: 265 NLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 324
N + LH AA G +V LL N T L AA R E L+
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 325 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEA 383
A + + A+ +H A+ G+ ++ LL NI+ G T LH A
Sbjct: 124 E-GGANPDAKDH------YEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLA 176
Query: 384 ALCGKLEVVKTLLEHGADLRIIDSKHNTVLDL 415
++E K L+ GA + I + + T L +
Sbjct: 177 CDEERVEEAKLLVSQGASIYIENKEEKTPLQV 208
Score = 64.6 bits (156), Expect = 2e-12
Identities = 36/145 (24%), Positives = 51/145 (35%), Gaps = 9/145 (6%)
Query: 271 NETALHCAAQYGHTPVVSQLL-EHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 329
+ + A G + + + T + TAL A G
Sbjct: 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGH-------TEIVEF 55
Query: 330 LIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGK 388
L+Q SPLH+A+ G +V LL G VN +G T LH AA +
Sbjct: 56 LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNR 115
Query: 389 LEVVKTLLEHGADLRIIDSKHNTVL 413
E+ LLE GA+ D T +
Sbjct: 116 HEIAVMLLEGGANPDAKDHYEATAM 140
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 111 bits (277), Expect = 3e-28
Identities = 51/252 (20%), Positives = 88/252 (34%), Gaps = 13/252 (5%)
Query: 62 VDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQL 121
V + A +G+ + V LL G ++N D TALH A + +V L
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGA---DINYANVDGLTALHQACIDDNVDMVKFL 92
Query: 122 LEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHL 181
+E+ + ++ L AA G L+ + L+ + +
Sbjct: 93 VENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152
Query: 182 ASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHL 241
R+G + A + G + LH+
Sbjct: 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNS-------GHINDVRHAKSGGTALHV 205
Query: 242 AAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN 301
AA G +++++L+ +VN+ D T LH AA +G L+E+ CD N
Sbjct: 206 AAAKGYTEVLKLLIQA---RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262
Query: 302 SRHETALDLAAQ 313
+TA D+A +
Sbjct: 263 KVGQTAFDVADE 274
Score = 106 bits (264), Expect = 2e-26
Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 32/263 (12%)
Query: 18 LLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTG 77
L A +G+ E V LL A N + G + LH A
Sbjct: 44 FLAACSSGDT-------------------EEVLRLLERGADINYANVDGLTALHQACIDD 84
Query: 78 NVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHET 137
NVD+V+ L+ +G ++ + LH AA G+ + L+ NS +T
Sbjct: 85 NVDMVKFLVENGANINQ---PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDT 141
Query: 138 ALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANV 197
LD+A + E + V I+A + + + L S + +
Sbjct: 142 PLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN-------DVR 194
Query: 198 QDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCH 257
SG +ALH AA G+ E+++LL+ NI D G +PLH AA G + R+L+ +
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254
Query: 258 GPSVPNVNLMTKDNETALHCAAQ 280
++ + K +TA A +
Sbjct: 255 L---CDMEAVNKVGQTAFDVADE 274
Score = 101 bits (251), Expect = 9e-25
Identities = 60/233 (25%), Positives = 95/233 (40%), Gaps = 24/233 (10%)
Query: 204 SALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPN 263
+ A +G E V LL A N + G + LH A NVD+V+ L+ +G ++
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101
Query: 264 VNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 323
+ LH AA G+ + L+ NS +T LD+A + E +
Sbjct: 102 ---PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 324 VRTHPGLIQAYNARAQSTLFPA--------------------SPLHLASRNGHRSVVARL 363
V I+A + + + LH+A+ G+ V+ L
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218
Query: 364 LQAGLDVNIRTASG-TALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDL 415
+QA DVNI+ G T LH AA GK E + L+E+ D+ ++ T D+
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271
Score = 57.0 bits (136), Expect = 1e-09
Identities = 27/145 (18%), Positives = 44/145 (30%), Gaps = 38/145 (26%)
Query: 87 CHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYG 146
N K TALH AA G+T V+ L++ D I++ T L AA +G
Sbjct: 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243
Query: 147 RLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSAL 206
+ E L + + G +A
Sbjct: 244 KEEACRIL----------------------------------VENLCDMEAVNKVGQTAF 269
Query: 207 HHAALNGHKEIVELLLTNEASTNIV 231
A ++I+ L + N++
Sbjct: 270 DVAD----EDILGYLEELQKKQNLL 290
Score = 50.1 bits (118), Expect = 2e-07
Identities = 14/50 (28%), Positives = 18/50 (36%)
Query: 270 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLET 319
D+ A G T V +LLE D N TAL A ++
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88
Score = 47.0 bits (110), Expect = 2e-06
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 372 IRTASGTALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDL 415
++ G A G E V LLE GAD+ + T L
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ 79
Score = 44.3 bits (103), Expect = 1e-05
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 345 ASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEV 391
+ A +G V RLL+ G D+N G TALH+A + +++
Sbjct: 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 106 bits (265), Expect = 1e-26
Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 22/272 (8%)
Query: 43 PLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMT-KD 101
P +E+ L + ++ N + ++ + V + N+N+ +
Sbjct: 49 PEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQ--EVNDAFPNTQLNLNIPVDEH 106
Query: 102 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGL 161
T LH + +V L++H + ++ E+ L A + T L
Sbjct: 107 GNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 166
Query: 162 IQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELL 221
+ LH + AA ++ +
Sbjct: 167 YPCLILEDS---MNRTILHHIIITSG---------------MTGCSAAAKYYLDILMGWI 208
Query: 222 L-TNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQ 280
+ + S + I+ L +N + +T L+ AA+
Sbjct: 209 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR 268
Query: 281 YGHTPVVSQLLEHSCDPTIRNSRHETALDLAA 312
G+ +V LL++ DP I N +D A
Sbjct: 269 LGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 104 bits (260), Expect = 9e-26
Identities = 54/266 (20%), Positives = 99/266 (37%), Gaps = 21/266 (7%)
Query: 164 AYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLT 223
A Q LFP S N S R SS H + + +E+ +
Sbjct: 38 KLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGG---SSNQQQQHVSFDSLLQEVNDAFPN 94
Query: 224 NEASTNI-VDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQ-- 280
+ + NI VD G++PLH N+++V+ L+ HG N E+ L A +
Sbjct: 95 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS---NRLYGDNMGESCLVKAVKSV 151
Query: 281 --YGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARA 338
Y + L + +S + T L + + + ++ + +
Sbjct: 152 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 211
Query: 339 QSTLFPA------SPLHLASRNGHRSVVARLLQAGL---DVNIRTASG-TALHEAALCGK 388
Q+ + S + + S++ L + +N + ++G T L+ AA G
Sbjct: 212 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 271
Query: 389 LEVVKTLLEHGADLRIIDSKHNTVLD 414
+ +V LL++GAD I + +D
Sbjct: 272 ISIVDALLDYGADPFIANKSGLRPVD 297
Score = 80.9 bits (198), Expect = 1e-17
Identities = 37/227 (16%), Positives = 58/227 (25%), Gaps = 38/227 (16%)
Query: 18 LLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWT- 76
L N+ E+V+ L+ + ++ D G S L A +
Sbjct: 111 LHWLTSIANL-------------------ELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 151
Query: 77 GNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHE 136
N D P + L N T LH + +
Sbjct: 152 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSG---------MTGCSAAAKYYLD 202
Query: 137 TALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGAN 196
+ + R + N
Sbjct: 203 ILMGWIVKKQNRPIQSGTNEKESKPNDKNGERK---------DSILENLDLKWIIANMLN 253
Query: 197 VQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAA 243
QDS+G + L+ AA G+ IV+ LL A I + G P+ A
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 65.1 bits (157), Expect = 2e-12
Identities = 31/233 (13%), Positives = 67/233 (28%), Gaps = 17/233 (7%)
Query: 196 NVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLL 255
N Q + L +E+ L + ++ N + ++ + V
Sbjct: 33 NEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQ--EVND 90
Query: 256 CHGPSVPNVNLMT-KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQY 314
+ N+N+ + T LH + +V L++H + ++ E+ L A +
Sbjct: 91 AFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKS 150
Query: 315 GRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVAR----------LL 364
T L + + S S A+ +
Sbjct: 151 VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVK 210
Query: 365 QAGLDVNIRTASG-TALHEAALCGKLEVVKTLLEH---GADLRIIDSKHNTVL 413
+ + T + ++ K +++ L L DS +T L
Sbjct: 211 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCL 263
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 102 bits (254), Expect = 3e-25
Identities = 59/285 (20%), Positives = 95/285 (33%), Gaps = 30/285 (10%)
Query: 47 EIVELLLTNEASTNIVDTK-GSSPLHLAAWTGNVDIVRVLLCHGPSVP-----NVNLMTK 100
I E + NI+D + + LH A + + L+ H +VN M
Sbjct: 15 AITEPITRESV--NIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC 72
Query: 101 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 160
D T L A +V+ L++ DPTI N +AL AA + ++
Sbjct: 73 DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLN---- 128
Query: 161 LIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVEL 220
+ + + L + + N + + + AA
Sbjct: 129 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK-------- 180
Query: 221 LLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQ 280
+ KG + LH AA N+ IV+ G N + +D +T + AAQ
Sbjct: 181 --------DSEKYKGRTALHYAAQVSNMPIVKY--LVGEKGSNKDKQDEDGKTPIMLAAQ 230
Query: 281 YGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 325
G VV L++ ++ TA LA VD R
Sbjct: 231 EGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 95.6 bits (236), Expect = 9e-23
Identities = 53/301 (17%), Positives = 88/301 (29%), Gaps = 36/301 (11%)
Query: 104 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH-ETALDLAAQYGRLETVDTLVRTHPGLI 162
LH A G + + S + I + RH T L A E + L
Sbjct: 4 IKLHTEAA-GSYAITEPITRESVN--IIDPRHNRTVLHWIASNSSAEKSEDL-------- 52
Query: 163 QAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLL 222
+ + G N D + L A L + +V L+
Sbjct: 53 ------------------IVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM 94
Query: 223 TNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYG 282
A I + S LH AA + ++ +L ++ + ++ TAL A
Sbjct: 95 KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 154
Query: 283 HTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTL 342
V+ + D GR ++ +++ S
Sbjct: 155 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 214
Query: 343 FPA-----SPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLL 396
+P+ LA++ G VV L+Q G V A+ TA A +V
Sbjct: 215 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
Query: 397 E 397
Sbjct: 275 R 275
Score = 88.6 bits (218), Expect = 2e-20
Identities = 51/259 (19%), Positives = 90/259 (34%), Gaps = 20/259 (7%)
Query: 177 SPLHLASRNGHSLR-----RGPGANVQDS-SGYSALHHAALNGHKEIVELLLTNE----- 225
SP+ L + S N+ D + LH A N E E L+ +E
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61
Query: 226 ---ASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYG 282
A N +D ++PL LA +V L+ G N + +G
Sbjct: 62 AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 121
Query: 283 HTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVD----TLVRTHPGLIQAYNARA 338
+ + D + TAL + A + V + + +
Sbjct: 122 MMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 181
Query: 339 QSTLFPASPLHLASRNGH-RSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLL 396
+ LH A++ + V + + G + + + G T + AA G++EVV L+
Sbjct: 182 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLI 241
Query: 397 EHGADLRIIDSKHNTVLDL 415
+ GA + +D+ +T L
Sbjct: 242 QQGASVEAVDATDHTARQL 260
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 95.7 bits (236), Expect = 3e-23
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 8/227 (3%)
Query: 66 GSSPLHLAAWTGNVDIVRVLLCHGPSVP-NVNLMTKDNETALHCAAQYGHTPVVSQLLEH 124
G +PLH+A GN+ V L+ +++ +T LH A VV L+
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 125 SCDPTIRNSRHETALDLAAQYGRLETVDTLVR--THPGLIQAYNARAQSTLFPASPLHLA 182
P + +TA LA ++ + L+ L T +
Sbjct: 63 GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122
Query: 183 SRNGHSLRRGPGA--NVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLH 240
L V SG S L HA N +V+LLL + A+ N GSS LH
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182
Query: 241 LAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVV 287
A+ G + +VR L+ G + +L N+T L A ++
Sbjct: 183 SASGRGLLPLVRTLVRSG---ADSSLKNCHNDTPLMVARSRRVIDIL 226
Score = 91.4 bits (225), Expect = 1e-21
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 11/228 (4%)
Query: 101 DNETALHCAAQYGHTPVVSQLL----EHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 156
D +T LH A G+ P V +L+ + + I N+ +T L LA V LV
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61
Query: 157 THPGLIQAYNARAQSTLFPASPLHLASRN---GHSLRRGPGANVQDSSGYSALHHAALNG 213
+ + + ++ G +ALH A
Sbjct: 62 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121
Query: 214 HKEIVELLLTNEASTNIVDTKGSS-PLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNE 272
+E V+LLL A + VD K PL A ++ +V++LL HG +V
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA---QMYSGS 178
Query: 273 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETV 320
+ALH A+ G P+V L+ D +++N ++T L +A ++ +
Sbjct: 179 SALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226
Score = 82.2 bits (201), Expect = 2e-18
Identities = 52/230 (22%), Positives = 91/230 (39%), Gaps = 20/230 (8%)
Query: 177 SPLHLASRNGH----------SLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEA 226
+PLH+A G+ + G ++ ++ + LH A + +V LL+T A
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 227 STNIVDTKGSSPLHLAAWTGNVDIVRVLLCHG-PSVPNVNLMTKDNETALHCAAQYGHTP 285
S +D G + HLA + +R LL P ++ D TALH A
Sbjct: 65 SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124
Query: 286 VVSQLLEHSCDPTIRNSR-HETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFP 344
V LLE D + + + L A + L V L++ + + +
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS----- 179
Query: 345 ASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVK 393
LH AS G +V L+++G D +++ T L A +++++
Sbjct: 180 --ALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 82.2 bits (201), Expect = 2e-18
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 10/219 (4%)
Query: 202 GYSALHHAALNGHKEIVELLLT----NEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCH 257
G + LH A + G+ V L+ +I + +PLHLA T +VR
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVR---LL 59
Query: 258 GPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRL 317
+ + + + +TA H A ++ + LL+ + T+ D
Sbjct: 60 VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY--DGLTALHVA 117
Query: 318 ETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG 377
+ L + + A SPL A N S+V LLQ G +VN + SG
Sbjct: 118 VNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG 177
Query: 378 -TALHEAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDL 415
+ALH A+ G L +V+TL+ GAD + + ++T L +
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 216
Score = 47.1 bits (110), Expect = 1e-06
Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 19/83 (22%)
Query: 1 MEELQCVVFSVMGKDQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTN 60
++ V + L A+ G + +V L+ + A ++
Sbjct: 164 LQHGANVNAQMYSGSSALHSASGRGLL-------------------PLVRTLVRSGADSS 204
Query: 61 IVDTKGSSPLHLAAWTGNVDIVR 83
+ + +PL +A +DI+R
Sbjct: 205 LKNCHNDTPLMVARSRRVIDILR 227
Score = 42.9 bits (99), Expect = 3e-05
Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 378 TALHEAALCGKLEVVKTLL----EHGADLRIIDSKHNTVLDLLKQFPPHAVHDISTIINP 433
T LH A + G L V L+ + G +L I ++ T L L +V +
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 434 VMSYEF 439
Sbjct: 65 SPMALD 70
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 89.5 bits (220), Expect = 3e-21
Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 4/209 (1%)
Query: 47 EIVELLLTNEASTNI-VDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETA 105
+++ LL A N +D G + LHLAA D + LL G + + +
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPL-- 60
Query: 106 LHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAY 165
H A V LL + T + A +E + + T I A
Sbjct: 61 -HAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAA 119
Query: 166 NARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNE 225
+ ++ L A+ ++ L + QD + L AA G E + LL N
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179
Query: 226 ASTNIVDTKGSSPLHLAAWTGNVDIVRVL 254
A+ I D P +A+ + DIVR+L
Sbjct: 180 ANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 87.5 bits (215), Expect = 1e-20
Identities = 47/208 (22%), Positives = 76/208 (36%), Gaps = 4/208 (1%)
Query: 117 VVSQLLEHSCDPTIR-NSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFP 175
V+S LL + + ET+L LAA++ R + L+ N
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 176 ASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKG 235
+ + R N + G + L AA + +VE L+T +A N D G
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123
Query: 236 SSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSC 295
+ LH AA N + V N + +ET L AA+ G LL++
Sbjct: 124 KTALHWAAAVNNTEAVN---ILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFA 180
Query: 296 DPTIRNSRHETALDLAAQYGRLETVDTL 323
+ I + D+A++ + V L
Sbjct: 181 NREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 78.3 bits (191), Expect = 3e-17
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 14/208 (6%)
Query: 194 GANV---QDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDI 250
GA + D +G ++LH AA + + LL A N D G +PLH A + +
Sbjct: 12 GAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGV 71
Query: 251 VRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDL 310
+ + N+N D T L AA+ +V L+ D ++ +TAL
Sbjct: 72 FQ--ILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHW 129
Query: 311 AAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDV 370
AA E V+ L+ H + +PL LA+R G LL +
Sbjct: 130 AAAVNNTEAVNILLMHHANRDAQDD-------KDETPLFLAAREGSYEASKALLDNFANR 182
Query: 371 NIRTASG-TALHEAALCGKLEVVKTLLE 397
I A+ ++V+ LL+
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVR-LLD 209
Score = 68.3 bits (165), Expect = 7e-14
Identities = 45/203 (22%), Positives = 71/203 (34%), Gaps = 11/203 (5%)
Query: 215 KEIVELLLTNEASTNI-VDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNET 273
+++ LL A N +D G + LHLAA D + LL G + + +
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPL- 60
Query: 274 ALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQA 333
H A V LL + T + A +E + + T I A
Sbjct: 61 --HAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINA 118
Query: 334 YNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVV 392
+ ++ LH A+ + V LL + + + T L AA G E
Sbjct: 119 ADNSGKT------ALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEAS 172
Query: 393 KTLLEHGADLRIIDSKHNTVLDL 415
K LL++ A+ I D D+
Sbjct: 173 KALLDNFANREITDHMDRLPRDV 195
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 85.6 bits (210), Expect = 1e-19
Identities = 45/233 (19%), Positives = 73/233 (31%), Gaps = 12/233 (5%)
Query: 69 PLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEH---- 124
PLH A V+ LL PS + +D LH + + + S LL
Sbjct: 3 PLHQACMENEFFKVQELLHSKPS--LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 125 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 184
+ D +S + R + + + L A
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Query: 185 NGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNI-VDTKGSSPLHLAA 243
+ + G ++D LH AA G +++ELL S D +G +PL A
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180
Query: 244 WTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCD 296
G+ D +L+ + +L+ A A V L + D
Sbjct: 181 AEGHGDAAVLLVEKYGA--EYDLVDNKGAKAEDVALNEQ---VKKFFLNNVVD 228
Score = 83.3 bits (204), Expect = 6e-19
Identities = 43/216 (19%), Positives = 73/216 (33%), Gaps = 8/216 (3%)
Query: 104 TALHCAAQYGHTPVVSQLLE-HSCDPTIRNSRHETALDLAAQYGRLETVDTL----VRTH 158
LH A V +LL ++ L + + E L +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 159 PGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIV 218
+ + + ++ + P N + G + LH A E+
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121
Query: 219 ELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCA 278
+ L+ N AS I D PLH AA G++ ++ +L G VN K T L A
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK--SAVNWQDKQGWTPLFHA 179
Query: 279 AQYGHTPVVSQLLE-HSCDPTIRNSRHETALDLAAQ 313
GH L+E + + + +++ A D+A
Sbjct: 180 LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 215
Score = 77.9 bits (190), Expect = 5e-17
Identities = 51/244 (20%), Positives = 76/244 (31%), Gaps = 24/244 (9%)
Query: 18 LLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTG 77
L +A V+ ELL + + D G PLH +
Sbjct: 4 LHQACMENEFFKVQ------------------ELLHSKPSLLLQKDQDGRIPLHWSVSFQ 45
Query: 78 NVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEH--SCDPTIRNSRH 135
+I LL +V + T H A G+ VV L + D ++
Sbjct: 46 AHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG 105
Query: 136 ETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGA 195
T L LA E L+ + AS L
Sbjct: 106 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 165
Query: 196 NVQDSSGYSALHHAALNGHKEIVELLLTNE-ASTNIVDTKGSSPLHLAAWTGNVDIVRVL 254
N QD G++ L HA GH + LL+ A ++VD KG+ +A N + +
Sbjct: 166 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFF 222
Query: 255 LCHG 258
L +
Sbjct: 223 LNNV 226
Score = 76.0 bits (185), Expect = 2e-16
Identities = 43/235 (18%), Positives = 71/235 (30%), Gaps = 47/235 (20%)
Query: 205 ALHHAALNGHKEIVELLL-TNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPN 263
LH A + V+ LL + + D G PLH + +I LL +V
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62
Query: 264 VNLMTKDN-----------------------------------ETALHCAAQYGHTPVVS 288
+ T LH A V
Sbjct: 63 DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122
Query: 289 QLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPL 348
L+E+ I++ ++ L AA G L+ ++ L + + + + PL
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT------PL 176
Query: 349 HLASRNGHRSVVARLL-QAGLDVNIRTASG-TALHEAALCGKLEVVKTLLEHGAD 401
A GH L+ + G + ++ G A A +V K L + D
Sbjct: 177 FHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228
Score = 40.6 bits (93), Expect = 2e-04
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 378 TALHEAALCGKLEVVKTLLE-HGADLRIIDSKHNTVLDL 415
LH+A + + V+ LL + L D L
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW 40
Score = 37.9 bits (86), Expect = 0.001
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 6/62 (9%)
Query: 306 TALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQ 365
L A V L+ + P L+ + + PLH + + + LL
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGR------IPLHWSVSFQAHEITSFLLS 55
Query: 366 AG 367
Sbjct: 56 KM 57
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 83.8 bits (205), Expect = 4e-19
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 9/215 (4%)
Query: 66 GSSPLHLAAWTGNVDIVRVLLCHGPSVP-NVNLMTKDNETALHCAAQYGHTPVVSQLLEH 124
G S LHLA + ++ +N +T LH A + LL
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 125 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 184
CDP +R+ R T L LA + G L +V + ++ + + LHLAS
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGV-LTQSCTTPHLHSILKATNYNGHTCLHLASI 120
Query: 185 NGHS----LRRGPGAN---VQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSS 237
+G+ L GA+ + +G +ALH A + ++V LLL A N V +G S
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180
Query: 238 PLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNE 272
P L + I + L + ++D E
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE 215
Score = 81.9 bits (200), Expect = 2e-18
Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 15/221 (6%)
Query: 101 DNETALHCAAQYGHTP----VVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 156
D ++ LH A + V+ Q+ +N+ +T L LA + E + L+
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60
Query: 157 THPGLIQAYNARAQSTLFPASPLHLAS-----RNGHSLRRGPGANVQDSSGYSALHHAAL 211
LAS ++ + + +G++ LH A++
Sbjct: 61 AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120
Query: 212 NGHKEIVELLLTNEAST-NIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKD 270
+G+ IVELL++ A G + LHLA N D+V +LL G +VN +T
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA---DVNRVTYQ 177
Query: 271 NETALHCAAQYGHTPVVSQLLEHSCDP--TIRNSRHETALD 309
+ T + QL + + + + S E + D
Sbjct: 178 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 218
Score = 81.1 bits (198), Expect = 3e-18
Identities = 44/208 (21%), Positives = 71/208 (34%), Gaps = 14/208 (6%)
Query: 202 GYSALHHAALNGH----KEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCH 257
G S LH A ++ E++ + + A N + +PLHLA T +I LL
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 258 GPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLL---EHSCDPTIRNSRHETALDLAAQY 314
G + V++Q N T L LA+ +
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121
Query: 315 GRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRT 374
G L V+ LV + ++ LHLA + +V+ LL+ G DVN T
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRT------ALHLAVDLQNPDLVSLLLKCGADVNRVT 175
Query: 375 ASG-TALHEAALCGKLEVVKTLLEHGAD 401
G + + + L + +
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 66.8 bits (161), Expect = 2e-13
Identities = 38/213 (17%), Positives = 58/213 (27%), Gaps = 18/213 (8%)
Query: 18 LLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWTG 77
L A + + E++ + + A N + +PLHLA T
Sbjct: 6 LHLAIIHEEKALTM---------------EVIRQVKGDLAFLNFQNNLQQTPLHLAVITN 50
Query: 78 NVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQL---LEHSCDPTIRNSR 134
+I LL G + V++Q N
Sbjct: 51 QPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 110
Query: 135 HETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPG 194
T L LA+ +G L V+ LV + ++ L A L L+ G
Sbjct: 111 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD 170
Query: 195 ANVQDSSGYSALHHAALNGHKEIVELLLTNEAS 227
N GYS I + L
Sbjct: 171 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 64.9 bits (156), Expect = 1e-12
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 4/184 (2%)
Query: 235 GSSPLHLAAWTGNVDIVRVLLCHGPSVP-NVNLMTKDNETALHCAAQYGHTPVVSQLLEH 293
G S LHLA + ++ +N +T LH A + LL
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 294 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 353
CDP +R+ R T L LA + G L +V + ++ + + LHLAS
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGV-LTQSCTTPHLHSILKATNYNGHTCLHLASI 120
Query: 354 NGHRSVVARLLQAGLDVNIRTASG--TALHEAALCGKLEVVKTLLEHGADLRIIDSKHNT 411
+G+ +V L+ G DVN + TALH A ++V LL+ GAD+ + + +
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180
Query: 412 VLDL 415
L
Sbjct: 181 PYQL 184
Score = 44.5 bits (103), Expect = 8e-06
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 47 EIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNE 103
++V LLL A N V +G SP L + I + L + ++D E
Sbjct: 159 DLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE 215
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 64.9 bits (156), Expect = 3e-13
Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 2/154 (1%)
Query: 101 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 160
D L AA+ G V L+ + T A T L
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 161 LIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVEL 220
+ R + + + G N +D +ALH A + H+E+VEL
Sbjct: 61 DARTKVDRTPLHMAASEGHANIVEVLL--KHGADVNAKDMLKMTALHWATEHNHQEVVEL 118
Query: 221 LLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVL 254
L+ A + + ++ GN D+ +L
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 59.9 bits (143), Expect = 2e-11
Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 13/157 (8%)
Query: 69 PLHLAAWTGNVDIVRVLLCHGPSV----PNVNLMTKDNETALHCAAQYGHTPVVSQLLEH 124
L AA G D VR+L+ +G + + + + VS+
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 125 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 184
D T + + D + + + A + L
Sbjct: 65 KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA 124
Query: 185 NGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELL 221
+ + Q +A + NG++++ E+L
Sbjct: 125 D---------VHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 55.6 bits (132), Expect = 6e-10
Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 29/148 (19%)
Query: 205 ALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVP-- 262
L AA G + V +L+ N A S A + +L
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 263 ---------------------------NVNLMTKDNETALHCAAQYGHTPVVSQLLEHSC 295
+VN TALH A ++ H VV L+++
Sbjct: 65 KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA 124
Query: 296 DPTIRNSRHETALDLAAQYGRLETVDTL 323
D ++ +TA D++ G + + L
Sbjct: 125 DVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 51.0 bits (120), Expect = 3e-08
Identities = 28/163 (17%), Positives = 52/163 (31%), Gaps = 20/163 (12%)
Query: 238 PLHLAAWTGNVDIVRVLLCHGPSV----PNVNLMTKDNETALHCAAQYGHTPVVSQLLEH 293
L AA G D VR+L+ +G + + + + VS+
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 294 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 353
D T + + D + + LH A+
Sbjct: 65 KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA---------------LHWATE 109
Query: 354 NGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTL 395
+ H+ VV L++ G DV+ ++ TA + G ++ + L
Sbjct: 110 HNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 50.6 bits (119), Expect = 3e-08
Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 10/147 (6%)
Query: 18 LLEAARNGNIQVVEKILSQRAK----------RSGPLAREIVELLLTNEASTNIVDTKGS 67
LLEAAR G V +++ A + D +
Sbjct: 6 LLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK 65
Query: 68 SPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCD 127
+ ++ +VN TALH A ++ H VV L+++ D
Sbjct: 66 VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125
Query: 128 PTIRNSRHETALDLAAQYGRLETVDTL 154
++ +TA D++ G + + L
Sbjct: 126 VHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 42.9 bits (99), Expect = 1e-05
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 57 ASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTP 116
A N D + LH A + ++V +V+ +K +TA + G+
Sbjct: 91 ADVNAKDMLKMTALHWATEHNHQEVVE---LLIKYGADVHTQSKFCKTAFDISIDNGNED 147
Query: 117 VVSQLLE 123
+ ++L+
Sbjct: 148 LA-EILQ 153
Score = 41.4 bits (95), Expect = 5e-05
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 377 GTALHEAALCGKLEVVKTLLEHGADL 402
G L EAA G+ + V+ L+ +GA
Sbjct: 3 GKKLLEAARAGQDDEVRILMANGAPF 28
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 64.5 bits (155), Expect = 4e-13
Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 4/157 (2%)
Query: 68 SPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCD 127
+ L AA G+++ + LL + NVN TAL LL +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNV---NVNAQNGFGRTALQVMKLGNPEIARRLLLRGANP 59
Query: 128 PTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 187
+ D AA+ G L+T+ TL+ + N A HL
Sbjct: 60 DLKDRTGFAVIHD-AARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118
Query: 188 SLRRGPGANVQDSSGYSALHHAALNGHKEIVELLLTN 224
++ G +A A L G E+V L+ N
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 63.0 bits (151), Expect = 1e-12
Identities = 38/164 (23%), Positives = 59/164 (35%), Gaps = 10/164 (6%)
Query: 204 SALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPN 263
+ L AA G E + LL N + N + G + L + N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIAR----RLLLRGAN 58
Query: 264 VNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 323
+L + +H AA+ G + LLE D I ++ L LAA+ G L V+ L
Sbjct: 59 PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118
Query: 324 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAG 367
V+ + N + + LA G VV+ + G
Sbjct: 119 VKHTASNVGHRNHKGD------TACDLARLYGRNEVVSLMQANG 156
Score = 56.4 bits (134), Expect = 3e-10
Identities = 31/164 (18%), Positives = 46/164 (28%), Gaps = 11/164 (6%)
Query: 237 SPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCD 296
+ L AA G+++ + LL + NVN TAL LL +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNV---NVNAQNGFGRTALQVMKLGNPEIARRLLLRGANP 59
Query: 297 PTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 356
+ L L + + A
Sbjct: 60 DLKDRTGFA-------VIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHL 112
Query: 357 RSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLLEHG 399
R V + +V R G TA A L G+ EVV + +G
Sbjct: 113 RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 46.4 bits (108), Expect = 9e-07
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 377 GTALHEAALCGKLEVVKTLLEHGADLRIIDSKHN 410
G L AA G LE + +LL++ ++ +
Sbjct: 2 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGR 35
Score = 41.4 bits (95), Expect = 4e-05
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 60 NIVDTKGSSPLHLAAWTGNVDIVRVLLCHG 89
+ KG + LA G ++V ++ +G
Sbjct: 127 GHRNHKGDTACDLARLYGRNEVVSLMQANG 156
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 59.4 bits (142), Expect = 2e-11
Identities = 23/158 (14%), Positives = 47/158 (29%), Gaps = 5/158 (3%)
Query: 65 KGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEH 124
+ L AA G+V VR LL + + + + +TAL +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELV--HPDALNRFGKTALQVMMFGSTAIALEL--LK 56
Query: 125 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 184
T+ A ++ H + + + A +
Sbjct: 57 QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAV 116
Query: 185 NGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELLL 222
+ +D+ G + L A G +++V++L
Sbjct: 117 VSFLAAESD-LHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 54.0 bits (128), Expect = 2e-09
Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 12/166 (7%)
Query: 234 KGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEH 293
+ L AA G+V VR LL + + + + +TAL +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELV--HPDALNRFGKTALQVMMFGSTAIALEL--LK 56
Query: 294 SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 353
T+ A ++ H + + + A +
Sbjct: 57 QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAV 116
Query: 354 NGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLEVVKTLLEH 398
+ + D++ R A G T L A G ++V L H
Sbjct: 117 VSFLAAES-------DLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 52.5 bits (124), Expect = 7e-09
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 5/160 (3%)
Query: 134 RHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGP 193
R L AA G ++ V L+ A N R T + L++G
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTALQVMMFGSTAIALELLKQGA 59
Query: 194 GANVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRV 253
NVQD+SG S +H AA G + +++L+ + A N+ D G+ P+HLA G+ +V
Sbjct: 60 SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVV-- 117
Query: 254 LLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEH 293
+ +++ T L A Q G +V L H
Sbjct: 118 --SFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 49.8 bits (117), Expect = 6e-08
Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 31/150 (20%)
Query: 205 ALHHAALNGHKEIVELLLTNE-ASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPN 263
L AA G + V LL E + ++ G + L + + + +L
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 264 -----------------------------VNLMTKDNETALHCAAQYGHTPVVSQLLEHS 294
VN+ +H A Q GHT VVS L
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL-AAE 123
Query: 295 CDPTIRNSRHETALDLAAQYGRLETVDTLV 324
D R++R T L+LA Q G + VD L
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 44.4 bits (103), Expect = 4e-06
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 60 NIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVS 119
N+ D G+ P+HLA G+ +V + +++ T L A Q G +V
Sbjct: 95 NVPDGTGALPIHLAVQEGHTAVV----SFLAAESDLHRRDARGLTPLELALQRGAQDLVD 150
Query: 120 QLLEH 124
L H
Sbjct: 151 ILQGH 155
Score = 42.9 bits (99), Expect = 2e-05
Identities = 34/149 (22%), Positives = 52/149 (34%), Gaps = 12/149 (8%)
Query: 18 LLEAARNGNIQVVEKILSQRA-----------KRSGPLAREIVELLLTNEASTNIVDTKG 66
L AA G++Q V ++L + + + L + +
Sbjct: 6 LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQD 65
Query: 67 SSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSC 126
+S + L +VN+ +H A Q GHT VVS L
Sbjct: 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF-LAAES 124
Query: 127 DPTIRNSRHETALDLAAQYGRLETVDTLV 155
D R++R T L+LA Q G + VD L
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 40.6 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 57 ASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCH 88
+ + D +G +PL LA G D+V +L H
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 37.5 bits (85), Expect = 0.001
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 376 SGTALHEAALCGKLEVVKTLLE-HGADLRIIDSKHNT 411
+G L AA G ++ V+ LL ++ T
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 56.5 bits (135), Expect = 3e-10
Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 13/138 (9%)
Query: 101 DNETALHC---AAQYGHTPVVSQLLEHSCDPTIR------NSRHETALDLAAQ---YGRL 148
D LH A + + Q D T + + ETAL LA + L
Sbjct: 2 DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61
Query: 149 ETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHH 208
VD LV+ + G + + + L A LR + + SG + L
Sbjct: 62 HIVDFLVQ-NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 120
Query: 209 AALNGHKEIVELLLTNEA 226
A H+ ELL +
Sbjct: 121 AKRLKHEHCEELLTQALS 138
Score = 54.6 bits (130), Expect = 1e-09
Identities = 20/136 (14%), Positives = 39/136 (28%), Gaps = 12/136 (8%)
Query: 199 DSSGYSALHHAALNGHKEIVELLLTNEASTN------IVDTKGSSPLHLAAWT---GNVD 249
++ +L A + + + LHLA + ++
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 250 IVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALD 309
IV L+ + ++ H + + LL I N ET LD
Sbjct: 63 IVDFLVQNSGNLDKQTGKGSTAL---HYCCLTDNAECLKLLLRGKASIEIANESGETPLD 119
Query: 310 LAAQYGRLETVDTLVR 325
+A + + L +
Sbjct: 120 IAKRLKHEHCEELLTQ 135
Score = 54.2 bits (129), Expect = 2e-09
Identities = 22/142 (15%), Positives = 43/142 (30%), Gaps = 19/142 (13%)
Query: 18 LLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAAWT- 76
L EA + +I + + + + + + LHLA +
Sbjct: 10 LCEAVKTRDIFGLLQAYADGVDLTEKIP-------------LANGHEPDETALHLAVRSV 56
Query: 77 --GNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR 134
++ IV L+ + ++ H + + LL I N
Sbjct: 57 DRTSLHIVDFLVQNSGNLDKQTGKGSTAL---HYCCLTDNAECLKLLLRGKASIEIANES 113
Query: 135 HETALDLAAQYGRLETVDTLVR 156
ET LD+A + + L +
Sbjct: 114 GETPLDIAKRLKHEHCEELLTQ 135
Score = 51.1 bits (121), Expect = 2e-08
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 179 LHLASRNGHSLRRGPGANVQDSSGYSALHHAALN---GHKEIVELLLTNEASTNIVDTKG 235
L A +G L +ALH A + IV+ L+ N + + KG
Sbjct: 22 LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG 81
Query: 236 SSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEH 293
S+ LH T N + +++LL ++ + + ET L A + H L +
Sbjct: 82 STALHYCCLTDNAECLKLLLRGKA---SIEIANESGETPLDIAKRLKHEHCEELLTQA 136
Score = 45.7 bits (107), Expect = 2e-06
Identities = 30/145 (20%), Positives = 46/145 (31%), Gaps = 20/145 (13%)
Query: 270 DNETALHC---AAQYGHTPVVSQLLEHSCDPTIR------NSRHETALDLAAQ---YGRL 317
D LH A + + Q D T + + ETAL LA + L
Sbjct: 2 DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61
Query: 318 ETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG 377
VD LV+ L + ++ LH + + LL+ + I SG
Sbjct: 62 HIVDFLVQNSGNLDKQTG-------KGSTALHYCCLTDNAECLKLLLRGKASIEIANESG 114
Query: 378 -TALHEAALCGKLEVVKTLLEHGAD 401
T L A + L + +
Sbjct: 115 ETPLDIAKRLKHEHCEELLTQALSG 139
Score = 36.5 bits (83), Expect = 0.002
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 347 PLHLASRNGHRSVVARLLQAGLDVNIRTASG-------TALHEAALC---GKLEVVKTLL 396
L A + + + G+D+ + TALH A L +V L+
Sbjct: 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68
Query: 397 EHGADLRIIDSKHN 410
++ +L K +
Sbjct: 69 QNSGNLDKQTGKGS 82
Score = 36.5 bits (83), Expect = 0.002
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 57 ASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHG 89
AS I + G +PL +A + +L
Sbjct: 105 ASIEIANESGETPLDIAKRLKHEHCEELLTQAL 137
Score = 27.2 bits (59), Expect = 2.4
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 378 TALHEAALCGKLEVVKTLLEHGADL 402
+L EA + + G DL
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDL 32
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 53.4 bits (126), Expect = 2e-09
Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 1/121 (0%)
Query: 102 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGL 161
+ L AA G V LLE +P NS + + L+
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 162 IQAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVELL 221
+ A R G +V+D+ G + A GH+++ L
Sbjct: 63 CADPATLTRPVHDAAREGF-LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Query: 222 L 222
Sbjct: 122 R 122
Score = 51.5 bits (121), Expect = 9e-09
Identities = 24/122 (19%), Positives = 37/122 (30%), Gaps = 3/122 (2%)
Query: 202 GYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSV 261
L AA G E V LL A+ N ++ G P+ L
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ---VMMMGSARVAELLLLHGA 59
Query: 262 PNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVD 321
+H AA+ G + L +R++ +DLA + G +
Sbjct: 60 EPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVAR 119
Query: 322 TL 323
L
Sbjct: 120 YL 121
Score = 46.5 bits (108), Expect = 6e-07
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 10/132 (7%)
Query: 235 GSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHS 294
+ L AA G V+ VR LL G + N + + + ++ E +
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 295 CDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRN 354
C +R T L +A + P+ LA
Sbjct: 63 CADPATLTRPVHDAAREGFL----------DTLVVLHRAGARLDVRDAWGRLPVDLAEEL 112
Query: 355 GHRSVVARLLQA 366
GHR V L A
Sbjct: 113 GHRDVARYLRAA 124
Score = 40.3 bits (92), Expect = 6e-05
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 8/128 (6%)
Query: 271 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGL 330
+ L AA G V LLE +P NS + ++ + + L
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGR-------RPIQVMMMGSARVAELLL 55
Query: 331 IQAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKL 389
+ P+H A+R G + L +AG +++R A G + A G
Sbjct: 56 LHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHR 115
Query: 390 EVVKTLLE 397
+V + L
Sbjct: 116 DVARYLRA 123
Score = 38.8 bits (88), Expect = 2e-04
Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 1/119 (0%)
Query: 137 TALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGAN 196
L AA GR+E V L+ A N+ + + L
Sbjct: 5 DWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNC 63
Query: 197 VQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLL 255
++ +H AA G + + +L A ++ D G P+ LA G+ D+ R L
Sbjct: 64 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Score = 37.6 bits (85), Expect = 6e-04
Identities = 14/119 (11%), Positives = 30/119 (25%), Gaps = 11/119 (9%)
Query: 18 LLEAARNGNIQVVEKILSQRAKRS-----------GPLAREIVELLLTNEASTNIVDTKG 66
L AA G ++ V +L A + + L
Sbjct: 7 LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADP 66
Query: 67 SSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHS 125
++ + L+ + +++ + A + GH V L +
Sbjct: 67 ATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 125
Score = 36.9 bits (83), Expect = 0.001
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 376 SGTALHEAALCGKLEVVKTLLEHGA 400
S L AA G++E V+ LLE GA
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGA 27
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 50.1 bits (118), Expect = 3e-08
Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 11/134 (8%)
Query: 273 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQ 332
L ++ G +V +++ DP++ N L+Q
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGI-------TALHNAVCAGHTEIVKFLVQ 55
Query: 333 AYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG----TALHEAALCGK 388
+ +PLH A+ + V L+++G V T S E G
Sbjct: 56 FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGY 115
Query: 389 LEVVKTLLEHGADL 402
+ + L +
Sbjct: 116 TQCSQFLYGVQEKM 129
Score = 46.6 bits (109), Expect = 6e-07
Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 4/126 (3%)
Query: 104 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQ 163
L ++ G +V +++ DP++ N TAL A G E V LV+ +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 164 AYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGY---SALHHAALNGHKEIVEL 220
A + AS ++ + G S + G+ + +
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCK-FLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121
Query: 221 LLTNEA 226
L +
Sbjct: 122 LYGVQE 127
Score = 45.4 bits (106), Expect = 1e-06
Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 33/123 (26%)
Query: 204 SALHHAALNGHKEIVELLLTNEASTNIVDTK----------------------------- 234
+ L ++L G ++V+ ++ ++ + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 235 ----GSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQL 290
G +PLH AA NV + + L+ G +V + + G+T L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 291 LEH 293
Sbjct: 123 YGV 125
Score = 42.0 bits (97), Expect = 2e-05
Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 18 LLEAARNGNIQVVEKILSQRA--------------KRSGPLAREIVELLLTNEASTNIVD 63
LL+++ G +V++I+ + EIV+ L+ + N D
Sbjct: 5 LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 64
Query: 64 TKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLE 123
+ G +PLH AA NV + + L+ G +V + + G+T L
Sbjct: 65 SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 124
Query: 124 H 124
Sbjct: 125 V 125
Score = 33.5 bits (75), Expect = 0.017
Identities = 5/33 (15%), Positives = 17/33 (51%)
Query: 378 TALHEAALCGKLEVVKTLLEHGADLRIIDSKHN 410
L +++L G+ ++V+ ++ D + + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGI 35
Score = 33.1 bits (74), Expect = 0.019
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 344 PASPLHLASRNGHRSVVARLLQAGLDVNI 372
P + L +S G +V R++ D ++
Sbjct: 1 PLALLLDSSLEGEFDLVQRIIYEVDDPSL 29
Score = 25.8 bits (55), Expect = 7.7
Identities = 5/23 (21%), Positives = 8/23 (34%)
Query: 17 DLLEAARNGNIQVVEKILSQRAK 39
D E G Q + + + K
Sbjct: 106 DKCEEMEEGYTQCSQFLYGVQEK 128
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 42.6 bits (98), Expect = 8e-06
Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 1/117 (0%)
Query: 103 ETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLI 162
+ A + G V + D L AA G+LE ++ L+ +
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 163 QAYNARAQSTLFPASPLHLASRNGHSLRRGPGANVQDSSGYSALHHAALNGHKEIVE 219
L H++ +G V+ G +AL K +++
Sbjct: 63 APDKHHITPLLSAVYEGHVSCVKLLL-SKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 41.8 bits (96), Expect = 2e-05
Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 3/109 (2%)
Query: 205 ALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLLCHGPSVPNV 264
A NG + V+ + N G PLH + + + +L ++
Sbjct: 5 EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLH---YAADCGQLEILEFLLLKGADI 61
Query: 265 NLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQ 313
N K + T L A GH V LL D T++ TAL+
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN 110
Score = 37.2 bits (84), Expect = 9e-04
Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 12/127 (9%)
Query: 272 ETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLI 331
+ A + G V + D L AA G+LE ++ L+ +
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62
Query: 332 QAYNARAQSTLFPASPLHLASRNGHRSVVARLLQAGLDVNIRTASG-TALHEAALCGKLE 390
+PL A GH S V LL G D ++ G TAL +
Sbjct: 63 APDK-------HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD----NQ 111
Query: 391 VVKTLLE 397
+K LL+
Sbjct: 112 AIKALLQ 118
Score = 35.3 bits (79), Expect = 0.003
Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 22/130 (16%)
Query: 15 DQDLLEAARNGNIQVVEKILSQRAKRSGPLAREIVELLLTNEASTNIVDTKGSSPLHLAA 74
D++ + A +NG++ V+ +++ V+
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKG----------------------EDVNRTLEGGRKPLH 40
Query: 75 WTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR 134
+ + + +L ++N K + T L A GH V LL D T++
Sbjct: 41 YAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPD 100
Query: 135 HETALDLAAQ 144
TAL+
Sbjct: 101 GLTALEATDN 110
Score = 34.9 bits (78), Expect = 0.005
Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 136 ETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHSLRRGPGA 195
+ A + G L+ V V + + L A+ L +G
Sbjct: 3 DKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61
Query: 196 NVQDSSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKGSSPLHLAAWTGNVDIVRVLL 255
N D + L A GH V+LLL+ A + G + L ++ LL
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN----QAIKALL 117
Score = 30.6 bits (67), Expect = 0.14
Identities = 5/21 (23%), Positives = 7/21 (33%)
Query: 378 TALHEAALCGKLEVVKTLLEH 398
A G L+ VK +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAK 24
>d1q0qa3 d.81.1.3 (A:126-274) 1-deoxy-D-xylulose-5-phosphate
reductoisomerase {Escherichia coli [TaxId: 562]}
Length = 149
Score = 31.9 bits (72), Expect = 0.073
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 382 EAALCGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDISTIINPVMSYEFLV 441
E+ + + + + A L +DS+HN + L Q H + N V+S
Sbjct: 1 ESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTG 60
Query: 442 SGGG 445
SGG
Sbjct: 61 SGGP 64
>d2gu3a2 d.17.1.6 (A:34-98) Uncharacterized protein YpmB {Bacillus
subtilis [TaxId: 1423]}
Length = 65
Score = 28.6 bits (64), Expect = 0.27
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 131 RNSRHETALDLAAQYGRLETVDT 153
+ HE A A + L VD
Sbjct: 1 KEEGHEAAAAEAKKETDLAHVDQ 23
Score = 28.6 bits (64), Expect = 0.27
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 300 RNSRHETALDLAAQYGRLETVDT 322
+ HE A A + L VD
Sbjct: 1 KEEGHEAAAAEAKKETDLAHVDQ 23
>d1r0ka3 d.81.1.3 (A:127-264) 1-deoxy-D-xylulose-5-phosphate
reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Length = 138
Score = 27.3 bits (60), Expect = 2.5
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 386 CGKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDI 427
G L ++ + EHG L +DS+HN + V I
Sbjct: 5 AGGL-MIDAVREHGTTLLPVDSEHNAIFQCFPHHNRDYVRRI 45
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 134
Score = 26.4 bits (58), Expect = 4.0
Identities = 11/61 (18%), Positives = 20/61 (32%)
Query: 66 GSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHS 125
G +L G VR + +NL N LH ++ + ++ +S
Sbjct: 3 GLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNS 62
Query: 126 C 126
Sbjct: 63 K 63
Score = 26.4 bits (58), Expect = 4.0
Identities = 11/61 (18%), Positives = 20/61 (32%)
Query: 235 GSSPLHLAAWTGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHS 294
G +L G VR + +NL N LH ++ + ++ +S
Sbjct: 3 GLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNS 62
Query: 295 C 295
Sbjct: 63 K 63
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster)
[TaxId: 7943]}
Length = 135
Score = 26.0 bits (57), Expect = 5.6
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 76 TGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 135
G V + + P +VN+ N +LH ++ + + + + NS
Sbjct: 12 VGKFLTVGGFINNSPQRFSVNVGESMNSLSLHLDHRFNYGADQNTI--------VMNSTL 63
Score = 26.0 bits (57), Expect = 5.6
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 245 TGNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 304
G V + + P +VN+ N +LH ++ + + + + NS
Sbjct: 12 VGKFLTVGGFINNSPQRFSVNVGESMNSLSLHLDHRFNYGADQNTI--------VMNSTL 63
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster)
[TaxId: 7943]}
Length = 134
Score = 26.0 bits (57), Expect = 6.0
Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 77 GNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHE 136
G V ++ + ++N+ + A+H ++ + + L + NS
Sbjct: 13 GMYLTVGGVVNSNATRFSINVGESTDSIAMHMDHRFSYGADQNVL--------VLNSLVH 64
Score = 26.0 bits (57), Expect = 6.0
Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 8/60 (13%)
Query: 246 GNVDIVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHE 305
G V ++ + ++N+ + A+H ++ + + L + NS
Sbjct: 13 GMYLTVGGVVNSNATRFSINVGESTDSIAMHMDHRFSYGADQNVL--------VLNSLVH 64
>d2c42a2 c.36.1.12 (A:786-1232) Pyruvate-ferredoxin oxidoreductase,
PFOR, domains VI {Desulfovibrio africanus [TaxId: 873]}
Length = 447
Score = 26.9 bits (59), Expect = 6.6
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Query: 200 SSGYSALHHAALNGHKEIVELLLTNEASTNIVDTKG 235
GY L H +G + ++ E +N T G
Sbjct: 183 DIGYGGLDHVLASGED-VNVFVMDTEVYSN---TGG 214
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein
EAJ56179 {Unidentified organism [TaxId: 32644]}
Length = 102
Score = 25.4 bits (55), Expect = 6.7
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 387 GKLEVVKTLLEHGADLRIIDSKHNTVLDLLKQFPPHAVHDISTIINPVMSYEFLVSGGGT 446
G + V ++ +ID K T++ P + NP+ S + L+ G
Sbjct: 29 GFIREVSDKPIKSSNAHVIDVKGKTIMPR--IVPGAHADVLVVDGNPLKSVDCLLGQGEH 86
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId:
38577]}
Length = 134
Score = 25.2 bits (55), Expect = 9.3
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Query: 81 IVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR 134
++ + VNL + LH A++ V+++ + NS+
Sbjct: 19 EIKGSIPPDCKGFAVNLGEDASNFLLHFNARFDLHGDVNKI--------VCNSK 64
Score = 25.2 bits (55), Expect = 9.3
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 8/54 (14%)
Query: 250 IVRVLLCHGPSVPNVNLMTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR 303
++ + VNL + LH A++ V+++ + NS+
Sbjct: 19 EIKGSIPPDCKGFAVNLGEDASNFLLHFNARFDLHGDVNKI--------VCNSK 64
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.131 0.379
Gapped
Lambda K H
0.267 0.0553 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,585,009
Number of extensions: 70380
Number of successful extensions: 839
Number of sequences better than 10.0: 1
Number of HSP's gapped: 372
Number of HSP's successfully gapped: 166
Length of query: 459
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 371
Effective length of database: 1,199,356
Effective search space: 444961076
Effective search space used: 444961076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.0 bits)