Query psy2185
Match_columns 136
No_of_seqs 150 out of 1874
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 18:25:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 2.2E-32 7.6E-37 166.4 13.5 124 4-135 13-136 (169)
2 4gpm_A Engineered protein OR26 100.0 1.3E-31 4.6E-36 162.9 13.5 116 7-130 49-164 (169)
3 3f6q_A Integrin-linked protein 100.0 9.5E-30 3.2E-34 155.8 13.6 127 2-135 12-138 (179)
4 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-29 4.4E-34 153.3 13.4 127 2-135 15-141 (165)
5 3v30_A DNA-binding protein rfx 100.0 3.1E-29 1E-33 152.6 13.4 127 2-135 9-135 (172)
6 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.8E-29 2E-33 151.1 13.7 125 3-135 22-146 (169)
7 1bi7_B P16INK4A, MTS1, multipl 100.0 7E-30 2.4E-34 153.4 8.4 125 2-135 19-144 (156)
8 3v31_A Ankyrin repeat family A 100.0 9.9E-29 3.4E-33 149.7 13.2 125 3-135 11-135 (167)
9 3c5r_A BARD-1, BRCA1-associate 100.0 1.1E-28 3.6E-33 145.2 11.8 109 19-135 1-109 (137)
10 1awc_B Protein (GA binding pro 100.0 1.6E-28 5.5E-33 146.9 12.6 124 3-135 10-133 (153)
11 1n0q_A 3ANK, 3 ankyrin repeats 100.0 3.1E-28 1.1E-32 134.5 12.2 93 28-127 1-93 (93)
12 2rfm_A Putative ankyrin repeat 100.0 1.8E-28 6.2E-33 151.6 11.6 122 6-135 46-167 (192)
13 4b93_B Ankyrin repeat domain-c 100.0 2.1E-28 7.2E-33 158.6 12.0 116 13-135 70-218 (269)
14 2jab_A H10-2-G3; HER2, darpin, 100.0 7.6E-28 2.6E-32 141.5 12.6 115 3-125 22-136 (136)
15 1d9s_A Cyclin-dependent kinase 100.0 6.1E-29 2.1E-33 146.2 7.8 113 6-127 23-136 (136)
16 4b93_B Ankyrin repeat domain-c 100.0 1.9E-28 6.7E-33 158.8 10.6 116 20-135 43-185 (269)
17 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.9E-28 2E-32 144.7 11.7 125 2-135 9-133 (156)
18 2rfa_A Transient receptor pote 100.0 4.7E-28 1.6E-32 153.4 11.8 134 2-135 10-154 (232)
19 1d9s_A Cyclin-dependent kinase 100.0 1.3E-28 4.6E-33 144.7 8.0 109 19-135 2-111 (136)
20 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.4E-28 1.9E-32 145.6 10.5 119 8-135 18-137 (162)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 9.1E-28 3.1E-32 154.2 11.3 124 5-135 100-223 (253)
22 3aaa_C Myotrophin, protein V-1 100.0 2.5E-27 8.4E-32 137.0 12.0 103 26-135 4-106 (123)
23 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.6E-27 1.2E-31 136.4 12.6 117 3-127 10-126 (126)
24 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.6E-27 1.6E-31 141.5 13.4 113 8-127 50-162 (162)
25 1oy3_D Transcription factor in 100.0 1.9E-27 6.3E-32 154.2 12.4 118 11-135 140-258 (282)
26 2l6b_A NR1C; ankyrin, consensu 100.0 6.3E-28 2.2E-32 138.0 8.7 105 24-135 4-108 (115)
27 2vge_A RELA-associated inhibit 100.0 2E-28 7E-33 155.4 7.2 125 3-135 29-156 (229)
28 3utm_A Tankyrase-1; tankyrase, 100.0 3.3E-27 1.1E-31 157.0 13.3 126 3-135 32-157 (351)
29 2f8y_A Notch homolog 1, transl 99.9 4.4E-27 1.5E-31 148.1 12.8 121 8-135 71-191 (223)
30 3aji_A 26S proteasome non-ATPa 99.9 5.9E-27 2E-31 148.2 13.4 113 16-135 93-205 (231)
31 3b7b_A Euchromatic histone-lys 99.9 4.8E-27 1.6E-31 149.1 13.0 125 4-135 86-210 (237)
32 3v30_A DNA-binding protein rfx 99.9 1.7E-27 6E-32 144.8 10.0 124 4-135 45-168 (172)
33 3hra_A Ankyrin repeat family p 99.9 4.8E-27 1.6E-31 145.8 12.0 121 5-132 15-137 (201)
34 2dzn_A Probable 26S proteasome 99.9 4.9E-27 1.7E-31 148.3 12.1 122 6-135 83-208 (228)
35 3aji_A 26S proteasome non-ATPa 99.9 1.2E-26 4.2E-31 146.8 13.9 123 4-133 15-137 (231)
36 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.1E-27 1.7E-31 149.7 11.5 121 6-135 16-136 (239)
37 3f6q_A Integrin-linked protein 99.9 3.4E-27 1.2E-31 144.4 9.3 123 5-135 49-171 (179)
38 2xai_A ASB-9, ankyrin repeat a 99.9 2E-26 6.9E-31 148.5 12.9 124 3-135 11-134 (261)
39 1s70_B 130 kDa myosin-binding 99.9 2.1E-26 7.2E-31 150.6 12.8 85 3-88 48-132 (299)
40 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-26 6E-31 135.6 11.0 104 25-135 10-113 (136)
41 1oy3_D Transcription factor in 99.9 1.8E-26 6E-31 149.6 12.0 64 22-85 38-101 (282)
42 3lvq_E ARF-GAP with SH3 domain 99.9 1.4E-26 4.8E-31 161.1 11.8 122 5-134 142-272 (497)
43 1ikn_D Protein (I-kappa-B-alph 99.9 1.9E-26 6.6E-31 146.5 11.4 120 8-135 58-184 (236)
44 1sw6_A Regulatory protein SWI6 99.9 2.3E-26 8E-31 152.6 12.1 127 9-135 110-316 (327)
45 3hra_A Ankyrin repeat family p 99.9 5.4E-26 1.9E-30 141.1 13.1 124 4-135 48-178 (201)
46 1k1a_A B-cell lymphoma 3-encod 99.9 4.1E-26 1.4E-30 145.0 12.7 108 21-135 108-216 (241)
47 1yyh_A HN1;, notch 1, ankyrin 99.9 1.8E-26 6.1E-31 148.1 11.1 111 18-135 79-190 (253)
48 2f8y_A Notch homolog 1, transl 99.9 6.1E-26 2.1E-30 142.9 13.2 123 5-135 35-158 (223)
49 1s70_B 130 kDa myosin-binding 99.9 4.6E-26 1.6E-30 149.0 13.0 124 4-135 82-265 (299)
50 2rfm_A Putative ankyrin repeat 99.9 3E-26 1E-30 141.6 11.3 110 19-135 25-134 (192)
51 1wdy_A 2-5A-dependent ribonucl 99.9 4.3E-26 1.5E-30 147.7 12.6 124 3-133 156-284 (285)
52 1n11_A Ankyrin; clathrin, BAND 99.9 2.7E-26 9.2E-31 157.1 12.1 121 7-135 257-377 (437)
53 2y1l_E Darpin-8.4; hydrolase-i 99.9 8E-26 2.7E-30 137.2 12.9 114 4-125 56-169 (169)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.1E-27 1.4E-31 150.1 7.1 123 4-134 46-171 (239)
55 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.2E-25 4.1E-30 134.6 12.9 108 8-124 48-155 (156)
56 3ljn_A Hypothetical protein; a 99.9 3.5E-26 1.2E-30 153.4 11.6 104 25-135 134-244 (364)
57 2pnn_A Transient receptor pote 99.9 1.7E-26 5.8E-31 149.6 9.7 130 4-134 110-266 (273)
58 3ehr_A Osteoclast-stimulating 99.9 2.9E-26 9.9E-31 144.6 10.3 109 18-133 95-204 (222)
59 4g8k_A 2-5A-dependent ribonucl 99.9 6.3E-26 2.2E-30 150.8 12.3 112 9-132 219-331 (337)
60 3twr_A Tankyrase-2; ankyrin re 99.9 2.8E-26 9.6E-31 138.6 9.4 114 4-126 51-164 (165)
61 2xai_A ASB-9, ankyrin repeat a 99.9 1.1E-25 3.8E-30 145.0 12.7 110 17-135 90-199 (261)
62 3deo_A Signal recognition part 99.9 4.1E-26 1.4E-30 140.2 10.1 102 26-135 41-143 (183)
63 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-25 5.6E-30 129.3 12.1 101 28-135 1-101 (126)
64 3d9h_A CDNA FLJ77766, highly s 99.9 9.8E-26 3.4E-30 147.1 12.5 123 4-135 68-190 (285)
65 3ehr_A Osteoclast-stimulating 99.9 1E-26 3.6E-31 146.6 7.6 107 22-135 66-173 (222)
66 2rfa_A Transient receptor pote 99.9 2.3E-25 7.7E-30 141.1 13.5 124 4-135 46-197 (232)
67 1awc_B Protein (GA binding pro 99.9 1.9E-25 6.4E-30 133.5 12.3 111 3-121 42-152 (153)
68 2dzn_A Probable 26S proteasome 99.9 1.9E-25 6.6E-30 140.9 12.9 103 26-135 69-174 (228)
69 3b7b_A Euchromatic histone-lys 99.9 2.4E-25 8.3E-30 141.3 13.4 122 5-134 21-143 (237)
70 2etb_A Transient receptor pote 99.9 7.6E-26 2.6E-30 145.3 11.0 116 13-135 63-221 (256)
71 4hbd_A KN motif and ankyrin re 99.9 3.9E-26 1.3E-30 148.4 9.5 108 21-135 103-250 (276)
72 3v31_A Ankyrin repeat family A 99.9 5.5E-26 1.9E-30 137.5 9.6 117 4-128 45-161 (167)
73 3kea_A K1L; tropism, ANK repea 99.9 6.5E-26 2.2E-30 147.9 10.3 106 21-135 23-128 (285)
74 1k1a_A B-cell lymphoma 3-encod 99.9 2.9E-25 9.8E-30 141.1 12.9 129 7-135 21-183 (241)
75 2vge_A RELA-associated inhibit 99.9 1.6E-25 5.4E-30 142.1 11.1 113 16-135 5-121 (229)
76 2etb_A Transient receptor pote 99.9 6.5E-26 2.2E-30 145.6 9.3 118 11-135 21-172 (256)
77 1bi7_B P16INK4A, MTS1, multipl 99.9 3.6E-26 1.2E-30 137.1 7.6 106 22-135 5-111 (156)
78 3d9h_A CDNA FLJ77766, highly s 99.9 3.4E-25 1.2E-29 144.5 12.7 111 16-135 145-255 (285)
79 3ui2_A Signal recognition part 99.9 1E-25 3.5E-30 144.1 9.9 102 26-135 42-144 (244)
80 3jxi_A Vanilloid receptor-rela 99.9 1.7E-25 5.9E-30 143.8 10.5 106 23-135 87-225 (260)
81 3ljn_A Hypothetical protein; a 99.9 1.1E-25 3.6E-30 151.0 9.9 118 7-132 152-274 (364)
82 1ikn_D Protein (I-kappa-B-alph 99.9 1.6E-25 5.4E-30 142.3 10.1 123 4-134 87-218 (236)
83 3utm_A Tankyrase-1; tankyrase, 99.9 7.5E-25 2.6E-29 145.6 13.6 131 4-135 67-280 (351)
84 3jxi_A Vanilloid receptor-rela 99.9 7.3E-26 2.5E-30 145.6 8.2 126 4-130 102-253 (260)
85 1wdy_A 2-5A-dependent ribonucl 99.9 9.4E-25 3.2E-29 141.4 13.3 121 3-131 13-134 (285)
86 3t8k_A Uncharacterized protein 99.9 4.2E-26 1.4E-30 140.6 6.6 107 22-135 30-154 (186)
87 2pnn_A Transient receptor pote 99.9 3.8E-25 1.3E-29 143.2 11.4 104 25-135 97-233 (273)
88 3kea_A K1L; tropism, ANK repea 99.9 7.1E-26 2.4E-30 147.8 7.7 70 17-86 83-153 (285)
89 1dcq_A PYK2-associated protein 99.9 4.3E-25 1.5E-29 143.7 11.1 106 16-128 150-264 (278)
90 4g8k_A 2-5A-dependent ribonucl 99.9 6.9E-25 2.4E-29 145.8 11.9 124 2-132 175-303 (337)
91 1n11_A Ankyrin; clathrin, BAND 99.9 9.1E-25 3.1E-29 149.5 12.3 131 3-134 22-178 (437)
92 3t8k_A Uncharacterized protein 99.9 3.1E-26 1.1E-30 141.2 4.4 116 11-133 57-185 (186)
93 2b0o_E UPLC1; arfgap, structur 99.9 3.5E-25 1.2E-29 145.6 9.4 112 9-128 165-285 (301)
94 4hbd_A KN motif and ankyrin re 99.9 2.1E-24 7.3E-29 140.2 12.7 111 7-125 162-273 (276)
95 2fo1_E LIN-12 protein; beta-ba 99.9 8.9E-25 3E-29 147.3 11.1 109 20-135 226-346 (373)
96 3deo_A Signal recognition part 99.9 1.4E-24 4.9E-29 133.3 11.0 103 3-114 52-155 (183)
97 3eu9_A Huntingtin-interacting 99.9 3.8E-24 1.3E-28 135.6 13.2 124 4-135 18-142 (240)
98 3ui2_A Signal recognition part 99.9 4.7E-25 1.6E-29 141.0 8.7 116 3-127 53-185 (244)
99 3aaa_C Myotrophin, protein V-1 99.9 4.6E-25 1.6E-29 127.4 7.7 105 3-115 15-119 (123)
100 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-25 3.7E-30 132.3 4.8 117 3-127 18-134 (137)
101 3eu9_A Huntingtin-interacting 99.9 4.4E-24 1.5E-28 135.3 10.9 119 17-135 63-210 (240)
102 3jue_A Arfgap with coiled-coil 99.9 1E-23 3.5E-28 141.8 12.1 111 8-126 213-325 (368)
103 2zgd_A 3 repeat synthetic anky 99.9 1.3E-23 4.6E-28 119.2 10.6 93 22-121 17-109 (110)
104 2fo1_E LIN-12 protein; beta-ba 99.9 2.3E-23 7.7E-28 140.4 11.8 114 7-128 250-372 (373)
105 3jue_A Arfgap with coiled-coil 99.9 2E-22 6.9E-27 135.5 11.0 103 26-135 196-301 (368)
106 2b0o_E UPLC1; arfgap, structur 99.9 1.9E-21 6.5E-26 127.8 11.7 100 29-135 151-259 (301)
107 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-21 5E-26 136.0 11.4 100 29-135 132-240 (497)
108 1dcq_A PYK2-associated protein 99.9 3.2E-21 1.1E-25 125.5 11.8 100 29-135 130-238 (278)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.5E-20 8.6E-25 102.5 9.1 84 3-87 10-93 (93)
110 2aja_A Ankyrin repeat family p 99.8 8E-22 2.7E-26 133.0 0.4 97 29-130 92-191 (376)
111 2aja_A Ankyrin repeat family p 99.8 9.3E-21 3.2E-25 127.8 3.9 119 2-127 99-224 (376)
112 1sw6_A Regulatory protein SWI6 99.8 5.4E-20 1.9E-24 122.1 6.3 96 33-135 101-201 (327)
113 2l6b_A NR1C; ankyrin, consensu 99.8 8.5E-20 2.9E-24 104.0 5.2 93 5-105 19-111 (115)
114 2zgd_A 3 repeat synthetic anky 99.7 3.6E-17 1.2E-21 92.5 8.2 78 3-81 32-109 (110)
115 1gp8_A Protein (scaffolding pr 70.9 4.1 0.00014 17.8 2.2 19 105-123 16-34 (40)
116 3zrh_A Ubiquitin thioesterase 57.3 35 0.0012 23.8 5.6 62 36-123 29-90 (454)
117 3zrh_A Ubiquitin thioesterase 41.9 87 0.003 21.9 6.9 25 60-84 67-91 (454)
118 3qil_A Clathrin heavy chain 1; 22.4 31 0.0011 19.4 0.9 30 97-126 30-59 (125)
119 3mkq_B Coatomer subunit alpha; 22.3 1.4E+02 0.0046 18.0 6.2 49 65-128 95-145 (177)
120 3hgl_A Effector protein hopab2 22.1 50 0.0017 17.0 1.6 15 115-129 10-24 (85)
121 3eyi_A Z-DNA-binding protein 1 22.0 88 0.003 15.7 2.9 24 75-114 13-36 (72)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.2e-32 Score=166.38 Aligned_cols=124 Identities=26% Similarity=0.317 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+-.+.++.+ .+.|+++|.+|..|.||||+|+..++.++++++++.|++++.++..|+||||+|+..|+.+++++|++
T Consensus 13 ~~G~~~~v~~L-l~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 91 (169)
T 4gpm_A 13 ENGNKDRVKDL-IENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 91 (169)
T ss_dssp HTTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHH-HHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 33444455444 46678888888888888888888888888888888888888888888888888888888888888888
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.|+++ +.++..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 92 ~gadv-------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G 136 (169)
T 4gpm_A 92 KGADV-------NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDG 136 (169)
T ss_dssp TTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CcCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 88877 6677778888888888888888888888888888877766
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=1.3e-31 Score=162.94 Aligned_cols=116 Identities=24% Similarity=0.267 Sum_probs=102.5
Q ss_pred HHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Q psy2185 7 LKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86 (136)
Q Consensus 7 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 86 (136)
....+ ..+.+.|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|++.|+
T Consensus 49 ~~~~~-~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga 127 (169)
T 4gpm_A 49 HKEVV-KLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 127 (169)
T ss_dssp CHHHH-HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHH-HHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 33444 44557899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcch
Q psy2185 87 GLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSK 130 (136)
Q Consensus 87 ~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~ 130 (136)
++ ..++..|+||||+|++.|+.+++++|+++|++++-
T Consensus 128 d~-------~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 128 DV-------NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred Cc-------cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 98 78899999999999999999999999999999864
No 3
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=9.5e-30 Score=155.82 Aligned_cols=127 Identities=21% Similarity=0.186 Sum_probs=118.0
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
|+..+..+.++.++...+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|
T Consensus 12 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (179)
T 3f6q_A 12 QCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKL 91 (179)
T ss_dssp HHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34455667788888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++.|+++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 92 l~~g~~~-------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 138 (179)
T 3f6q_A 92 LQYKADI-------NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 138 (179)
T ss_dssp HHTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTS
T ss_pred HHcCCCC-------CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCC
Confidence 9999998 7788899999999999999999999999999999998876
No 4
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.3e-29 Score=153.29 Aligned_cols=127 Identities=23% Similarity=0.248 Sum_probs=117.1
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
|+..+..+.++.++...+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|
T Consensus 15 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 94 (165)
T 3twr_A 15 AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELL 94 (165)
T ss_dssp HHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHH
Confidence 34455667778888778888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++.++++ ...+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 95 l~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 141 (165)
T 3twr_A 95 VKHGAVV-------NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDG 141 (165)
T ss_dssp HHTTCCT-------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HhCCCCC-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 9999998 7788899999999999999999999999999999998876
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.1e-29 Score=152.56 Aligned_cols=127 Identities=19% Similarity=0.163 Sum_probs=114.4
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
|+..+..+.++.++...+..++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|
T Consensus 9 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 88 (172)
T 3v30_A 9 LAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88 (172)
T ss_dssp HHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHH
Confidence 34455566777787776666889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++.++++ ...+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 89 l~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 135 (172)
T 3v30_A 89 LERDVDI-------NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSG 135 (172)
T ss_dssp HTTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHcCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 9999987 6788899999999999999999999999999999988776
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=5.8e-29 Score=151.11 Aligned_cols=125 Identities=23% Similarity=0.253 Sum_probs=113.5
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.|.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+
T Consensus 22 ~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 100 (169)
T 2y1l_E 22 ARAGRDDEVRILM-ANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL 100 (169)
T ss_dssp HHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444455555554 668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.++++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 101 ~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 146 (169)
T 2y1l_E 101 KNGADV-------NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFG 146 (169)
T ss_dssp HTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 999988 6788899999999999999999999999999999988776
No 7
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=7e-30 Score=153.38 Aligned_cols=125 Identities=18% Similarity=0.154 Sum_probs=104.4
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCC-HHHHHHHcCCHHHHHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHET-ALDLAAQYGRLETVDT 80 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t-~l~~a~~~~~~~~~~~ 80 (136)
|+..+..+.++.++ +.|.+++..+..|.||||+|+ .|+.+++++|+++|++++.++..|.| |||+|+..|+.+++++
T Consensus 19 A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~ 96 (156)
T 1bi7_B 19 AAARGRVEEVRALL-EAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVV 96 (156)
T ss_dssp HHHHTCHHHHHHHH-TTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHH
Confidence 34445556665655 568999999999999999985 99999999999999999999999999 9999999999999999
Q ss_pred HHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 81 LVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 81 Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|++.|+++ ...+..|+||||+|+..|+.+++++|+++|++++.++..|
T Consensus 97 Ll~~ga~~-------~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 144 (156)
T 1bi7_B 97 LHRAGARL-------DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHAR 144 (156)
T ss_dssp HHHHTCCS-------SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------
T ss_pred HHHcCCCC-------cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCc
Confidence 99999998 7788899999999999999999999999999999998776
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=9.9e-29 Score=149.66 Aligned_cols=125 Identities=22% Similarity=0.177 Sum_probs=113.4
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+
T Consensus 11 ~~~g~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (167)
T 3v31_A 11 AAQGEMLYLATRI-EQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL 89 (167)
T ss_dssp HHTTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHCCCHHHHHHHH-HcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3444455665555 557889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.++++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 90 ~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 135 (167)
T 3v31_A 90 DCGVDV-------NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSG 135 (167)
T ss_dssp HHTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HCCCCC-------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 999988 6788899999999999999999999999999999998876
No 9
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=1.1e-28 Score=145.24 Aligned_cols=109 Identities=26% Similarity=0.301 Sum_probs=100.9
Q ss_pred hhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccC
Q psy2185 19 EDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQS 98 (136)
Q Consensus 19 ~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 98 (136)
|+++ .+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.++++ ...
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------~~~ 72 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-------NTT 72 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-------TCC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-------cCc
Confidence 3455 67889999999999999999999999999999999999999999999999999999999999987 678
Q ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 99 TLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 99 ~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 109 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG 109 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 8889999999999999999999999999999999877
No 10
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.6e-28 Score=146.92 Aligned_cols=124 Identities=19% Similarity=0.235 Sum_probs=110.3
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.+.+++ .+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+
T Consensus 10 ~~~g~~~~v~~Ll-~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 87 (153)
T 1awc_B 10 ARAGQDDEVRILM-ANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL 87 (153)
T ss_dssp HHHTCHHHHHHHH-HHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH-HcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 3444555565555 4566665 5788999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.|+++ ...+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 88 ~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 133 (153)
T 1awc_B 88 KHGADV-------NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFC 133 (153)
T ss_dssp TTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 999998 7788899999999999999999999999999999998776
No 11
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.96 E-value=3.1e-28 Score=134.50 Aligned_cols=93 Identities=34% Similarity=0.464 Sum_probs=88.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHH
Q psy2185 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLH 107 (136)
Q Consensus 28 ~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~ 107 (136)
+|+||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|+++ ..++..|+||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-------~~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-------NAKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-------TCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------CccCCCCCCHHH
Confidence 4899999999999999999999999999999999999999999999999999999999998 778889999999
Q ss_pred HHHHcCcHHHHHHHHhCCCC
Q psy2185 108 LASRNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 108 ~A~~~g~~~~~~~Ll~~g~~ 127 (136)
+|+..|+.+++++|+++|++
T Consensus 74 ~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 74 LAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999985
No 12
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.8e-28 Score=151.55 Aligned_cols=122 Identities=17% Similarity=0.150 Sum_probs=109.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Q psy2185 6 NLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85 (136)
Q Consensus 6 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 85 (136)
+..+.++.+ .+.+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 46 g~~~~v~~L-l~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 124 (192)
T 2rfm_A 46 GMENAIDKL-VENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG 124 (192)
T ss_dssp TCGGGHHHH-HHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCHHHHHHH-HHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 334444444 4568889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 86 PGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 125 ~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 167 (192)
T 2rfm_A 125 ANV-------NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTG 167 (192)
T ss_dssp CCS-------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTS
T ss_pred CCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 988 7788899999999999999999999999999999988776
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=2.1e-28 Score=158.64 Aligned_cols=116 Identities=21% Similarity=0.241 Sum_probs=82.1
Q ss_pred HHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhc---------------------------------CCCCCccc
Q psy2185 13 DMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEH---------------------------------SCDPTIRN 59 (136)
Q Consensus 13 ~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~---------------------------------~~~~~~~~ 59 (136)
.++...|+++|.+|..|+||||+|+..|+.+++++|++. |++++.++
T Consensus 70 ~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d 149 (269)
T 4b93_B 70 AKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKD 149 (269)
T ss_dssp -----CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCC
Confidence 344456666666666666666666666666666655554 45555566
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 60 SRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 60 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..|+||||+|+..|+.+++++|++.|+++ +..+..|+||||+|+..|+.+++++|+++|+|++.+|..|
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-------n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 218 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGASI-------NASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQ 218 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCCT-------TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCC-------CccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 66777777777777777777777777776 6677788888888888888888888888888888888776
No 14
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=7.6e-28 Score=141.48 Aligned_cols=115 Identities=19% Similarity=0.207 Sum_probs=99.6
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.+.+++..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+
T Consensus 22 ~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 100 (136)
T 2jab_A 22 ARAGQDDEVRILM-ANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL 100 (136)
T ss_dssp HHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHhCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444455555554 568889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSD 125 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g 125 (136)
+.++++ ...+..|.||||+|+..|+.+++++|+++|
T Consensus 101 ~~g~~~-------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 101 KHGADV-------NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCCC-------cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999887 677888999999999999999999999876
No 15
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=6.1e-29 Score=146.16 Aligned_cols=113 Identities=20% Similarity=0.217 Sum_probs=84.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCC-CCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 6 NLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR-HETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 6 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
+..+.++.++ +.+.+++.++..|.||||+|+. ++.+++++|+++|++++.++.. |.||||+|+..|+.+++++|++.
T Consensus 23 ~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 100 (136)
T 1d9s_A 23 GQVETVRQLL-EAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100 (136)
T ss_dssp TCHHHHHHHH-HTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHH-HcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3344444444 5567777777778888888887 8888888888878777777777 78888888888888888888877
Q ss_pred CCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy2185 85 HPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~ 127 (136)
++++ ...+..|+||||+|+..|+.+++++|+++|+|
T Consensus 101 ga~~-------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 101 GARL-------DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCCC-------CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCC-------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7776 56677778888888888888888888877765
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=158.80 Aligned_cols=116 Identities=13% Similarity=0.120 Sum_probs=72.7
Q ss_pred hhhhhhccCCchHHHHHHHcCCH-HHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhh-----
Q psy2185 20 DELLMLTKDNETALHCAAQYGHT-PVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYN----- 93 (136)
Q Consensus 20 ~~~~~~~~~g~t~l~~a~~~g~~-~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~----- 93 (136)
..++..+..+.|||++|+..+.. .++++|++.|++++.++..|+||||+|+..|+.+++++|++.++++.....
T Consensus 43 ~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~ 122 (269)
T 4b93_B 43 DTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVP 122 (269)
T ss_dssp --------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCH
T ss_pred ccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCc
Confidence 34667788999999999988776 478999999999999999999999999999999999999998876522111
Q ss_pred ---------------------hhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 94 ---------------------ARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 94 ---------------------~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.+..+..|+||||+|+..|+.+++++|+++|++++.++..|
T Consensus 123 l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g 185 (269)
T 4b93_B 123 LHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKG 185 (269)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTS
T ss_pred cccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCC
Confidence 234567889999999999999999999999999999888776
No 17
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=5.9e-28 Score=144.70 Aligned_cols=125 Identities=20% Similarity=0.226 Sum_probs=111.4
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
|+..+..+.++.++...+.+++..+..|.||||+ +..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|
T Consensus 9 A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 87 (156)
T 1bd8_A 9 AAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVL 87 (156)
T ss_dssp HHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 3445556677777777566889999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++.|+++ ...+..|+||||+|+..|+.+++++|+++ ++++.+|..|
T Consensus 88 l~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g 133 (156)
T 1bd8_A 88 VEHGADV-------NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARG 133 (156)
T ss_dssp HHTTCCS-------CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTS
T ss_pred HHcCCCC-------CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCC
Confidence 9999887 77888999999999999999999999999 9999888776
No 18
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=4.7e-28 Score=153.44 Aligned_cols=134 Identities=17% Similarity=0.087 Sum_probs=113.1
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCC-----CcccCCCCCHHHHHHHcCCHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDP-----TIRNSRHETALDLAAQYGRLE 76 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~-----~~~~~~g~t~l~~a~~~~~~~ 76 (136)
|+..+..+.++.++...+.+++.+|..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..|+.+
T Consensus 10 A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 89 (232)
T 2rfa_A 10 AAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVN 89 (232)
T ss_dssp HHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHH
Confidence 445556677778887779999999999999999999999999999999998876 566778999999999999999
Q ss_pred HHHHHHHhCCChhHhhh------hhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 77 TVDTLVRTHPGLIQAYN------ARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 77 ~~~~Ll~~~~~~~~~~~------~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++++|++.++++..... .....+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 90 ~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 154 (232)
T 2rfa_A 90 LVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLG 154 (232)
T ss_dssp HHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 99999999988722110 001123479999999999999999999999999999999877
No 19
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.3e-28 Score=144.72 Aligned_cols=109 Identities=20% Similarity=0.173 Sum_probs=103.1
Q ss_pred hhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccC
Q psy2185 19 EDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQS 98 (136)
Q Consensus 19 ~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 98 (136)
+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+. ++.+++++|++.++++ ...
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-------~~~ 73 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-------NCA 73 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-------SCC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-------CCc
Confidence 35678889999999999999999999999999999999999999999999999 9999999999999998 778
Q ss_pred CCC-CCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 99 TLF-PASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 99 ~~~-~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.. |+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWG 111 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSS
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 888 9999999999999999999999999999998876
No 20
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.4e-28 Score=145.62 Aligned_cols=119 Identities=18% Similarity=0.221 Sum_probs=71.4
Q ss_pred HHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q psy2185 8 KRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 87 (136)
Q Consensus 8 ~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 87 (136)
.+.++.++ +.+.+++..+..|.||||+|+. |+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.+++
T Consensus 18 ~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 95 (162)
T 1ihb_A 18 LEQLTSLL-QNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD 95 (162)
T ss_dssp HHHHHHHT-TSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHHH-hCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 33343333 4455666666666666666666 666666666666666666666666666666666666666666666655
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-cchhhccC
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFC-SSKVTRRF 135 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g 135 (136)
+ ...+..|+||||+|+..|+.+++++|+++|++ ++.+|..|
T Consensus 96 ~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 137 (162)
T 1ihb_A 96 V-------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKG 137 (162)
T ss_dssp T-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred C-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCC
Confidence 5 44555666666666666666666666666665 35555443
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=9.1e-28 Score=154.16 Aligned_cols=124 Identities=15% Similarity=0.111 Sum_probs=93.8
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 5 NNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
.+..+.++.++.....+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 100 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 179 (253)
T 1yyh_A 100 ADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 179 (253)
T ss_dssp HTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 34445555555444446777777777777777777777777777777777777777788888888888888888888888
Q ss_pred CCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 85 HPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|+++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 180 ga~~-------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 180 GANK-------DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp TCCT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCCC-------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCC
Confidence 7776 5677788888888888888888888888888888887765
No 22
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=2.5e-27 Score=137.05 Aligned_cols=103 Identities=16% Similarity=0.112 Sum_probs=95.8
Q ss_pred ccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCH
Q psy2185 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASP 105 (136)
Q Consensus 26 ~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~ 105 (136)
+..|.||||+|+..|+.+++++|++.+++++.++..|+||||+|+..++.+++++|++.++++ ...+..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-------NAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-------TCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-------CcCCCCCCCH
Confidence 457889999999999999999999999999999999999999999999999999999999987 7788899999
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 106 LHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 106 l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
||+|+..|+.+++++|+++|++++.+|..|
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 106 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADKTVKGPDG 106 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 999999999999999999999999998876
No 23
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=3.6e-27 Score=136.37 Aligned_cols=117 Identities=30% Similarity=0.369 Sum_probs=105.8
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.+.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+
T Consensus 10 ~~~~~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 88 (126)
T 1n0r_A 10 ARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88 (126)
T ss_dssp HHHTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCcHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHH
Confidence 3444455555554 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~ 127 (136)
+.++++ ...+..|.|||++|+..|+.+++++|+++|+|
T Consensus 89 ~~g~~~-------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 89 EAGADV-------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HcCCCC-------cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999987 67888999999999999999999999999986
No 24
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=4.6e-27 Score=141.52 Aligned_cols=113 Identities=19% Similarity=0.162 Sum_probs=101.3
Q ss_pred HHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q psy2185 8 KRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 87 (136)
Q Consensus 8 ~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 87 (136)
.+.++ .+.+.+.+++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.+++
T Consensus 50 ~~~v~-~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 50 PEIAR-RLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp HHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred HHHHH-HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 44444 44567899999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~ 127 (136)
. ....+..|.||||+|+..|+.+++++|+++|+|
T Consensus 129 ~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 129 N------VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp C------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred C------CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 4 156778899999999999999999999999986
No 25
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=1.9e-27 Score=154.21 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=105.0
Q ss_pred HHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccC-CCCCHHHHHHHcCCHHHHHHHHHhCCChh
Q psy2185 11 SRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNS-RHETALDLAAQYGRLETVDTLVRTHPGLI 89 (136)
Q Consensus 11 ~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 89 (136)
....+...+.+++..+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++.|+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~- 218 (282)
T 1oy3_D 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP- 218 (282)
T ss_dssp ----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred hhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-
Confidence 34455566788899999999999999999999999999999999999875 4999999999999999999999999998
Q ss_pred HhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 90 QAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 90 ~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..++..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 219 ------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 258 (282)
T 1oy3_D 219 ------TARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDK 258 (282)
T ss_dssp ------TCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---
T ss_pred ------cccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcc
Confidence 7788999999999999999999999999999999999877
No 26
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.95 E-value=6.3e-28 Score=138.00 Aligned_cols=105 Identities=29% Similarity=0.316 Sum_probs=99.9
Q ss_pred hhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCC
Q psy2185 24 MLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPA 103 (136)
Q Consensus 24 ~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 103 (136)
.+|..|.||||+|+..|+.+++++|++.+++++.++..|.||||+|+..++.+++++|++.++++ ...+..|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------~~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-------NARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-------TCCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-------cccCCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999987 67888999
Q ss_pred CHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 104 SPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 104 t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
||||+|+..|+.+++++|+++|++++.++..|
T Consensus 77 tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~ 108 (115)
T 2l6b_A 77 TPEHLAKKNGHHEIVKLLDAKGADVNARSWGS 108 (115)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCC
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCCCcCCccc
Confidence 99999999999999999999999999998765
No 27
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=155.39 Aligned_cols=125 Identities=14% Similarity=0.044 Sum_probs=105.4
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.|.+++..|..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|+
T Consensus 29 ~~~g~~~~v~~Ll-~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll 107 (229)
T 2vge_A 29 ALTGELEVVQQAV-KEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV 107 (229)
T ss_dssp HHHTCHHHHHHHH-HHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 3444455555554 678888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCC-CCCCCHHHHH--HHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQST-LFPASPLHLA--SRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~-~~~~t~l~~A--~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.|+++ ...+ ..|+||||+| +..|+.+++++|+++|++++.+|..|
T Consensus 108 ~~ga~~-------~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~ 156 (229)
T 2vge_A 108 QHGAAI-------FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA 156 (229)
T ss_dssp TTTCCT-------TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGE
T ss_pred HcCCCc-------ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCc
Confidence 998887 4444 5899999999 88999999999999999988887654
No 28
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=3.3e-27 Score=156.96 Aligned_cols=126 Identities=20% Similarity=0.198 Sum_probs=116.5
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++...+.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus 32 ~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 111 (351)
T 3utm_A 32 ARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL 111 (351)
T ss_dssp HHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH
Confidence 44555667778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.++++ ...+..|.||||+|+..|+.+++++|+++|++++..+..|
T Consensus 112 ~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 157 (351)
T 3utm_A 112 KHGACV-------NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHG 157 (351)
T ss_dssp HTTCCT-------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HCCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Confidence 999988 6788899999999999999999999999999999887655
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=4.4e-27 Score=148.08 Aligned_cols=121 Identities=16% Similarity=0.111 Sum_probs=73.8
Q ss_pred HHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q psy2185 8 KRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 87 (136)
Q Consensus 8 ~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 87 (136)
.+.++.++.....+++..+..|.||||+|+..++.+++++|++.+++++.++..|.||||+|+..++.+++++|++.+++
T Consensus 71 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 150 (223)
T 2f8y_A 71 QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 150 (223)
T ss_dssp HHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 34444444433335555555666666666666666666666666666666666666666666666666666666666655
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 151 ~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 191 (223)
T 2f8y_A 151 K-------DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMD 191 (223)
T ss_dssp T-------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred C-------CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccC
Confidence 5 4555666667777766666666676666666666665544
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=5.9e-27 Score=148.22 Aligned_cols=113 Identities=20% Similarity=0.176 Sum_probs=78.4
Q ss_pred hhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhh
Q psy2185 16 TETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNAR 95 (136)
Q Consensus 16 ~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 95 (136)
.+.+.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.++++
T Consensus 93 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------- 165 (231)
T 3aji_A 93 LVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST------- 165 (231)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-------
T ss_pred HHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-------
Confidence 3455556666666666666666666666666666666666666666666666666666666666666666655
Q ss_pred ccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 96 AQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 96 ~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 166 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 205 (231)
T 3aji_A 166 NIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEE 205 (231)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 5667778888888888888888888888888888887766
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=4.8e-27 Score=149.13 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.++...+.+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|++
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 34445556566555447788888888888888888888888888888888888888888888888888888888888888
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.++++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 166 ~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 210 (237)
T 3b7b_A 166 AKCDL-------HAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEG 210 (237)
T ss_dssp TTCCT-------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred cCCCC-------CCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCC
Confidence 88887 6678889999999999999999999999999999988876
No 32
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=1.7e-27 Score=144.78 Aligned_cols=124 Identities=23% Similarity=0.130 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.+ .+.|.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++
T Consensus 45 ~~~~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 45 AFGEIETVRFL-LEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp HTTCHHHHHHH-HHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHH-HHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34444555444 47789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.|+++ ...+..|.||||+|+..|+.+++++|+++|+++..++..|
T Consensus 124 ~ga~~-------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~ 168 (172)
T 3v30_A 124 RGADL-------TTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVP 168 (172)
T ss_dssp TTCCT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC----
T ss_pred cCCCc-------cccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCC
Confidence 99998 7788899999999999999999999999999887766544
No 33
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=4.8e-27 Score=145.84 Aligned_cols=121 Identities=16% Similarity=0.229 Sum_probs=72.7
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 5 NNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
.+..+.++.++...+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 15 ~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 94 (201)
T 3hra_A 15 QRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKH 94 (201)
T ss_dssp TTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 34445556666666667777777777777777777777777777777777777777777777777777777777777743
Q ss_pred -CCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCC-CCcchhh
Q psy2185 85 -HPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSD-FCSSKVT 132 (136)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g-~~~~~~~ 132 (136)
+.++ ...+..|.||||+|+..|+.+++++|+++| ++++.+|
T Consensus 95 ~~~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 137 (201)
T 3hra_A 95 ATPDL-------NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQN 137 (201)
T ss_dssp SCCCT-------TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCC
T ss_pred cCccc-------ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCC
Confidence 3233 223333444444444444444444444433 3333333
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=4.9e-27 Score=148.26 Aligned_cols=122 Identities=19% Similarity=0.133 Sum_probs=101.9
Q ss_pred HHHHHHHHHhhhhh--hhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 6 NLKRKSRDMETETE--DELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 6 ~~~~~~~~ll~~~~--~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
+..+.++.++ +.+ .+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~~~Ll-~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 83 GNLEVVKSLY-DRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp CCHHHHHHHH-SSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCHHHHHHHH-hCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 3344444444 445 7788888888999999999999999999998888888888889999999999999999999998
Q ss_pred hC-CChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHH-hCCCCcchhhccC
Q psy2185 84 TH-PGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKV-QSDFCSSKVTRRF 135 (136)
Q Consensus 84 ~~-~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll-~~g~~~~~~~~~g 135 (136)
.+ .++ +..+..|+||||+|+..|+.+++++|+ ++|++++.+|..|
T Consensus 162 ~g~~~~-------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g 208 (228)
T 2dzn_A 162 LGKSAV-------NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208 (228)
T ss_dssp TTCCCS-------CCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTS
T ss_pred cCcccc-------cCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCC
Confidence 88 665 667888999999999999999999999 7899999988876
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.2e-26 Score=146.77 Aligned_cols=123 Identities=20% Similarity=0.194 Sum_probs=71.7
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
+.+..+.+++++...+..++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++
T Consensus 15 ~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 94 (231)
T 3aji_A 15 YSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLV 94 (231)
T ss_dssp HHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHH
Confidence 33444455555555555556666666666666666666666666666666666666666666666666666666666666
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhc
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTR 133 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~ 133 (136)
.++++ ...+..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 95 ~g~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 137 (231)
T 3aji_A 95 KGAHV-------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH 137 (231)
T ss_dssp TTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 66555 33344444444444444444444444444444444443
No 36
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=5.1e-27 Score=149.68 Aligned_cols=121 Identities=20% Similarity=0.111 Sum_probs=89.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Q psy2185 6 NLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85 (136)
Q Consensus 6 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 85 (136)
+..+.+ ..+.+.|.+++.. ..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|
T Consensus 16 ~~~~~~-~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g 93 (239)
T 1ycs_B 16 NLRKTG-SERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG 93 (239)
T ss_dssp -----------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred hhHHHH-HHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 333444 3445677777754 67889999999999999999999999999888889999999999999999999999998
Q ss_pred CChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 86 PGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+++ +..+..|+||||+|+..|+.+++++|+++|++++.++..|
T Consensus 94 a~~-------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 136 (239)
T 1ycs_B 94 VNV-------NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD 136 (239)
T ss_dssp CCT-------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred CCC-------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC
Confidence 887 6778889999999999999999999999999998887654
No 37
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=3.4e-27 Score=144.45 Aligned_cols=123 Identities=16% Similarity=0.216 Sum_probs=112.0
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 5 NNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
.+..+.+ +++.+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.
T Consensus 49 ~~~~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 127 (179)
T 3f6q_A 49 EGRSAVV-EMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127 (179)
T ss_dssp TTCHHHH-HHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCcHHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 3344455 444577899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 85 HPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|+++ ...+..|.|||++|+..++.+++++|+++|++++..+.++
T Consensus 128 ga~~-------~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 128 GALV-------SICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp TCCS-------SBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred CCCc-------chhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 9998 7889999999999999999999999999999998877654
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=2e-26 Score=148.52 Aligned_cols=124 Identities=21% Similarity=0.202 Sum_probs=97.7
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.|.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus 11 ~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (261)
T 2xai_A 11 AIHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL 89 (261)
T ss_dssp HHHTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4444455555554 568889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.++++ . .+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 90 ~~g~~~-------~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 134 (261)
T 2xai_A 90 QHGASV-------Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL 134 (261)
T ss_dssp HTTCCS-------S-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred HCCCCC-------C-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCC
Confidence 988876 2 23346677777777777777777777777777666554
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-26 Score=150.60 Aligned_cols=85 Identities=19% Similarity=0.162 Sum_probs=65.6
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.++ +.|.+++..+..|.||||+||..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus 48 ~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 126 (299)
T 1s70_B 48 CSSGDTEEVLRLL-ERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI 126 (299)
T ss_dssp HHHTCHHHHHHHH-HHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3344445554444 567788888888888888888888888888888888888888888888888888888888888888
Q ss_pred HhCCCh
Q psy2185 83 RTHPGL 88 (136)
Q Consensus 83 ~~~~~~ 88 (136)
+.|+++
T Consensus 127 ~~g~~~ 132 (299)
T 1s70_B 127 SQGAHV 132 (299)
T ss_dssp HTTCCT
T ss_pred hCCCCC
Confidence 877654
No 40
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.8e-26 Score=135.61 Aligned_cols=104 Identities=23% Similarity=0.208 Sum_probs=97.2
Q ss_pred hccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCC
Q psy2185 25 LTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPAS 104 (136)
Q Consensus 25 ~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t 104 (136)
....+.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.++++ ...+..|.|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~~~d~~g~t 82 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-------NAVDAIGFT 82 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-------TCCCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------CcCCCCCCC
Confidence 3456889999999999999999999999999999999999999999999999999999999987 678889999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 105 PLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 105 ~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|||+|+..|+.+++++|+++|++++.+|..|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 113 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGADVNAQDKFG 113 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcCcCCCC
Confidence 9999999999999999999999999988776
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=1.8e-26 Score=149.60 Aligned_cols=64 Identities=25% Similarity=0.259 Sum_probs=39.3
Q ss_pred hhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Q psy2185 22 LLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85 (136)
Q Consensus 22 ~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 85 (136)
++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.+
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 101 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR 101 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccC
Confidence 5556666666666666666666666666666666665555566665555555555555555543
No 42
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.94 E-value=1.4e-26 Score=161.13 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=103.2
Q ss_pred hHHHHHHHHHhhhhhhhhhhh------ccCCchHHHHHHH---cCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCH
Q psy2185 5 NNLKRKSRDMETETEDELLML------TKDNETALHCAAQ---YGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRL 75 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~------~~~g~t~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~ 75 (136)
.+-.+.+..+ ...|.+++.. +..|.||||+||. .|+.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 142 ~g~~~~v~~l-l~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~ 220 (497)
T 3lvq_E 142 NRDLLSVLEA-FANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQP 220 (497)
T ss_dssp HTCHHHHHHH-HHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCH
T ss_pred ccCHHHHHHH-HhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCH
Confidence 3344445444 4667888877 8899999999976 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhcc
Q psy2185 76 ETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRR 134 (136)
Q Consensus 76 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~ 134 (136)
+++++|++.|+++ +..+..|+||||+|+..|+.+++++|+++|++++..+..
T Consensus 221 ~~v~~Ll~~ga~~-------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 221 DCLKLLLKGRALV-------GTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp HHHHHHHHTCCCC-------SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------
T ss_pred HHHHHHHHcCCCC-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcce
Confidence 9999999999998 788999999999999999999999999999999876544
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.9e-26 Score=146.48 Aligned_cols=120 Identities=19% Similarity=0.112 Sum_probs=94.9
Q ss_pred HHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCC------CCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 8 KRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCD------PTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 8 ~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
.+.+ +++.+.|++++..+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|
T Consensus 58 ~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 136 (236)
T 1ikn_D 58 PEIA-EALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 136 (236)
T ss_dssp HHHH-HCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHH-HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3344 444567788888888888888888888888888888887765 345566788888888888888888888
Q ss_pred HHhCCChhHhhhhhccCCC-CCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 82 VRTHPGLIQAYNARAQSTL-FPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~-~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++.|+++ ...+. .|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 137 l~~g~~~-------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 184 (236)
T 1ikn_D 137 VSLGADV-------NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG 184 (236)
T ss_dssp HHHTCCT-------TCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTC
T ss_pred HHcCCCC-------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCC
Confidence 8888877 55665 78899999999888889999998888888888766
No 44
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=2.3e-26 Score=152.62 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=102.4
Q ss_pred HHHHHHhhhhhhhhhh-hccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCC---HHHHHHHHHh
Q psy2185 9 RKSRDMETETEDELLM-LTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGR---LETVDTLVRT 84 (136)
Q Consensus 9 ~~~~~ll~~~~~~~~~-~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~Ll~~ 84 (136)
..+..++.+.|++++. .|..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+ .++++.|++.
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 3455666788999999 89999999999999999999999999999999999999999999998776 3444444443
Q ss_pred C-CCh----------hHh--------------------------------------------------------------
Q psy2185 85 H-PGL----------IQA-------------------------------------------------------------- 91 (136)
Q Consensus 85 ~-~~~----------~~~-------------------------------------------------------------- 91 (136)
+ .++ .-.
T Consensus 190 ~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~ 269 (327)
T 1sw6_A 190 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLK 269 (327)
T ss_dssp HGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHH
T ss_pred hhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHH
Confidence 2 100 000
Q ss_pred ---hhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 92 ---YNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 92 ---~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..+.+.++..|+||||+|++.|+.+++++|+++|++++.+|..|
T Consensus 270 ~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 316 (327)
T 1sw6_A 270 WIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG 316 (327)
T ss_dssp HHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 00245677899999999999999999999999999999999887
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=5.4e-26 Score=141.07 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHH-hcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLL-EHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll-~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
..+..+.++. +.+.|++++..+..|.||||+|+..|+.+++++|+ ..+.+++.++..|.||||+|+..++.+++++|+
T Consensus 48 ~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 126 (201)
T 3hra_A 48 HNNDIEIAKA-LIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126 (201)
T ss_dssp HHTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHH-HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3444455544 45779999999999999999999999999999999 567789999999999999999999999999999
Q ss_pred HhC-CChhHhhhhhccCCCCCCCHHHHHHHcCc-----HHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTH-PGLIQAYNARAQSTLFPASPLHLASRNGH-----RFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~-~~~~~~~~~~~~~~~~~~t~l~~A~~~g~-----~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.+ .++ ...+..|+||||+|+..++ .+++++|+++|++++.+|..|
T Consensus 127 ~~g~~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g 178 (201)
T 3hra_A 127 EDGREDI-------DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSG 178 (201)
T ss_dssp HHCCCCT-------TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCCc-------CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCC
Confidence 998 666 6788899999999999988 899999999999999998876
No 46
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=4.1e-26 Score=145.01 Aligned_cols=108 Identities=25% Similarity=0.177 Sum_probs=80.3
Q ss_pred hhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCccc-CCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCC
Q psy2185 21 ELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN-SRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQST 99 (136)
Q Consensus 21 ~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 99 (136)
+++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|+++ ...+
T Consensus 108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~~~~ 180 (241)
T 1k1a_A 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV-------NAQM 180 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-------TCBC
T ss_pred cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-------CCcC
Confidence 556666667777777777777777777777777776666 56777777777777777777777777666 5667
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 100 LFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 100 ~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 181 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 216 (241)
T 1k1a_A 181 YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHN 216 (241)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCC
Confidence 778888888888888888888888888888777665
No 47
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=1.8e-26 Score=148.14 Aligned_cols=111 Identities=18% Similarity=0.137 Sum_probs=62.9
Q ss_pred hhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhc
Q psy2185 18 TEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSC-DPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARA 96 (136)
Q Consensus 18 ~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 96 (136)
.|.+++..+..|.||||+|+..|+.+++++|++.+. +++.++..|.||||+|+..++.+++++|++.++++ .
T Consensus 79 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~ 151 (253)
T 1yyh_A 79 ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-------N 151 (253)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT-------T
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC-------C
Confidence 344444444444444444444444444444444433 33444444444444444444444444444444443 4
Q ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 97 QSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 97 ~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 152 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 190 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 566778888888888888888888888888888777665
No 48
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=6.1e-26 Score=142.87 Aligned_cols=123 Identities=17% Similarity=0.134 Sum_probs=103.1
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 5 NNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSC-DPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
.+..+.++.++ +.+.+++..+..|.||||+|+..|+.+++++|++.+. +++.++..|.||||+|+..++.+++++|++
T Consensus 35 ~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 113 (223)
T 2f8y_A 35 YSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN 113 (223)
T ss_dssp TTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHH
Confidence 33444554444 5678888888888999999999999999999888876 777888888899999999999999999998
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.++++ ...+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 114 ~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 158 (223)
T 2f8y_A 114 SHADV-------NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158 (223)
T ss_dssp TTCCT-------TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred cCCCC-------cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 88887 6677889999999999999999999999999999888766
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=4.6e-26 Score=148.95 Aligned_cols=124 Identities=19% Similarity=0.149 Sum_probs=108.6
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCC----------------------
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR---------------------- 61 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~---------------------- 61 (136)
..+..+.++ ++.+.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 82 ~~g~~~~v~-~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 82 IDDNVDMVK-FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp HTTCHHHHH-HHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred HcCCHHHHH-HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 344445554 445689999999999999999999999999999999999999888754
Q ss_pred --------------------------------------CCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCC
Q psy2185 62 --------------------------------------HETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPA 103 (136)
Q Consensus 62 --------------------------------------g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 103 (136)
|.||||+|+..|+.+++++|++.|+++ +..+..|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-------~~~d~~g~ 233 (299)
T 1s70_B 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-------NIKDYDGW 233 (299)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-------TCCCTTCC
T ss_pred hcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-------CCcCCCCC
Confidence 557788888899999999999999888 77888999
Q ss_pred CHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 104 SPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 104 t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 234 tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 265 (299)
T 1s70_B 234 TPLHAAAHWGKEEACRILVENLCDMEAVNKVG 265 (299)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred cHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 99999999999999999999999999999877
No 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=3e-26 Score=141.57 Aligned_cols=110 Identities=15% Similarity=0.053 Sum_probs=103.6
Q ss_pred hhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccC
Q psy2185 19 EDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQS 98 (136)
Q Consensus 19 ~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 98 (136)
...++.+|..|.||||+|+..|+.+++++|++.+++++.++..|.||||+|+..++.+++++|++.++++ ...
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~~~ 97 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-------NTK 97 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-------TCC
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-------CCC
Confidence 3456788999999999999999999999999999999999999999999999999999999999999987 678
Q ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 99 TLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 99 ~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 134 (192)
T 2rfm_A 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEG 134 (192)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 8899999999999999999999999999999998776
No 51
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=4.3e-26 Score=147.67 Aligned_cols=124 Identities=17% Similarity=0.108 Sum_probs=113.6
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCC----HHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGH----TPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETV 78 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~----~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 78 (136)
+..+..+.++.++...+.+++..+..|.||||+|+..++ .+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 445556777777777799999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHH-hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhc
Q psy2185 79 DTLVR-THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTR 133 (136)
Q Consensus 79 ~~Ll~-~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~ 133 (136)
++|++ .+.++ ...+..|.||||+|++.|+.+++++|+++|++++.+|.
T Consensus 236 ~~Ll~~~g~~~-------~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 236 QRLLEQEHIEI-------NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHHHSSSCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred HHHHhccCCCc-------cccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 99999 78887 77888999999999999999999999999999998873
No 52
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.7e-26 Score=157.08 Aligned_cols=121 Identities=23% Similarity=0.286 Sum_probs=99.3
Q ss_pred HHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Q psy2185 7 LKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86 (136)
Q Consensus 7 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 86 (136)
..+.++ ++.+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.|+
T Consensus 257 ~~~~v~-~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 335 (437)
T 1n11_A 257 HAEMVA-LLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA 335 (437)
T ss_dssp CHHHHH-HHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC
T ss_pred CHHHHH-HHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC
Confidence 334443 3445677777888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 87 GLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 87 ~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
++ +.++..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 336 d~-------n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g 377 (437)
T 1n11_A 336 DV-------NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG 377 (437)
T ss_dssp CT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSS
T ss_pred CC-------CCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCC
Confidence 87 6778889999999999999999999999999999888776
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=8e-26 Score=137.21 Aligned_cols=114 Identities=21% Similarity=0.326 Sum_probs=102.8
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.+ .+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++
T Consensus 56 ~~~~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 56 FNGHLEIVEVL-LKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp HTTCHHHHHHH-HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHH-HHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 33444555444 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSD 125 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g 125 (136)
.|+++ ...+..|.|||++|+..|+.+++++|+++|
T Consensus 135 ~g~~~-------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 135 NGADV-------NAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred cCCCC-------CCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 99998 678889999999999999999999999886
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=4.1e-27 Score=150.10 Aligned_cols=123 Identities=17% Similarity=0.100 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.+ .+.+.+++..|..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|++
T Consensus 46 ~~g~~~~v~~L-l~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 46 LEGEFDLVQRI-IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp HHTCHHHHHHH-TSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHH-HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34444555454 47788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHhhhhhccCCCCCC-CHHHHH--HHcCcHHHHHHHHhCCCCcchhhcc
Q psy2185 84 THPGLIQAYNARAQSTLFPA-SPLHLA--SRNGHRFYLQQKVQSDFCSSKVTRR 134 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~-t~l~~A--~~~g~~~~~~~Ll~~g~~~~~~~~~ 134 (136)
.|+++ ...+..+. ||||+| +..|+.+++++|+++|++++..++.
T Consensus 125 ~ga~~-------~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~ 171 (239)
T 1ycs_B 125 SGAAV-------FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKG 171 (239)
T ss_dssp TTCCT-------TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGG
T ss_pred cCCCc-------ceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccc
Confidence 99998 66666666 999999 7889999999999999998887654
No 55
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.2e-25 Score=134.63 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=98.8
Q ss_pred HHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q psy2185 8 KRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 87 (136)
Q Consensus 8 ~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 87 (136)
.+.+ ..+.+.|.+++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++. ++
T Consensus 48 ~~~v-~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~ 125 (156)
T 1bd8_A 48 TAIA-LELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD 125 (156)
T ss_dssp HHHH-HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC
T ss_pred HHHH-HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC
Confidence 3344 444577999999999999999999999999999999999999999999999999999999999999999998 77
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhC
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQS 124 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~ 124 (136)
+ ...+..|.||||+|+..|+.+++++|+++
T Consensus 126 ~-------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 126 L-------HRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp T-------TCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred C-------CCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 6 67888999999999999999999999975
No 56
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=3.5e-26 Score=153.39 Aligned_cols=104 Identities=21% Similarity=0.202 Sum_probs=76.1
Q ss_pred hccCCchHHHHHHHcC--CHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC-----hhHhhhhhcc
Q psy2185 25 LTKDNETALHCAAQYG--HTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG-----LIQAYNARAQ 97 (136)
Q Consensus 25 ~~~~g~t~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~~~ 97 (136)
.+..|.||||+|+..| +.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.+++ + ..
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------~~ 206 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRL-------DY 206 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCT-------TC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccc-------cc
Confidence 6667777777777777 77777777777777777777777777777777777777777777666 4 45
Q ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 98 STLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 98 ~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g 244 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEH 244 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 56667777777777777777777777777777776655
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.7e-26 Score=149.60 Aligned_cols=130 Identities=16% Similarity=0.100 Sum_probs=103.6
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcc--------------CCchHHHHHHHcCCHHHHHHHHh---cCCCCCcccCCCCCHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTK--------------DNETALHCAAQYGHTPVVSQLLE---HSCDPTIRNSRHETAL 66 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~--------------~g~t~l~~a~~~g~~~~~~~ll~---~~~~~~~~~~~g~t~l 66 (136)
..+..+.++ +|.+.|++++..+. .|.||||+|+..|+.+++++|++ .|++++.++..|+|||
T Consensus 110 ~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpL 188 (273)
T 2pnn_A 110 ERRNMTLVT-LLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVL 188 (273)
T ss_dssp HTTCHHHHH-HHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred HcCCHHHHH-HHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHH
Confidence 344445554 44567999999987 79999999999999999999999 9999999999999999
Q ss_pred HHHHHcCC---------HHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCC-Ccchhhcc
Q psy2185 67 DLAAQYGR---------LETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDF-CSSKVTRR 134 (136)
Q Consensus 67 ~~a~~~~~---------~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~ 134 (136)
|+|+..++ .+++++|++.|+++..........+..|+||||+|+..|+.+++++|+++|+ |+......
T Consensus 189 h~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~ 266 (273)
T 2pnn_A 189 HALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAA 266 (273)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--------
T ss_pred HHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhh
Confidence 99999888 7999999999887722111112478899999999999999999999999999 78776654
No 58
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=2.9e-26 Score=144.57 Aligned_cols=109 Identities=21% Similarity=0.191 Sum_probs=51.6
Q ss_pred hhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhc-CCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhc
Q psy2185 18 TEDELLMLTKDNETALHCAAQYGHTPVVSQLLEH-SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARA 96 (136)
Q Consensus 18 ~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 96 (136)
.+.+++..|..|.||||+||..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|++.|+++ .
T Consensus 95 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-------~ 167 (222)
T 3ehr_A 95 NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART-------D 167 (222)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-------C
T ss_pred CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------c
Confidence 4455555555555555555555555555555554 5555555555555555555555555555555555554 4
Q ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhc
Q psy2185 97 QSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTR 133 (136)
Q Consensus 97 ~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~ 133 (136)
..+..|.|||++|+..|+.++++.|++.|++.+..+.
T Consensus 168 ~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 168 LRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp CCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred cccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 4455555555555555555555555555555544443
No 59
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.94 E-value=6.3e-26 Score=150.77 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=97.4
Q ss_pred HHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhc-CCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q psy2185 9 RKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEH-SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 87 (136)
Q Consensus 9 ~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 87 (136)
+.+.++|.+.|++++.++..|.||||+|+..|+.+++++|+.. +++++.++..|+||||+|+..|+.+++++|++.|++
T Consensus 219 ~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 219 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp HHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 3455677788999999999999999999999999999999975 889999999999999999999999999999999988
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhh
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVT 132 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~ 132 (136)
+ +..+|||+|++.|+.+++++|+++|+++|...
T Consensus 299 ~------------n~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~~ 331 (337)
T 4g8k_A 299 T------------DCGDLVMTARRNYDHSLVKVLLSHGAKEDFHP 331 (337)
T ss_dssp S------------TTCCHHHHHHHTTCHHHHHHHHHTTCCC----
T ss_pred C------------CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence 7 24579999999999999999999999998753
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=2.8e-26 Score=138.59 Aligned_cols=114 Identities=19% Similarity=0.151 Sum_probs=101.6
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++. +.+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++
T Consensus 51 ~~~~~~~v~~-Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 51 GYNRVSVVEY-LLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp HTTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcChHHHHHH-HHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3344455544 456789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDF 126 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~ 126 (136)
.|+++ ...+..|.||||+|+. |+.+++++|+++|+
T Consensus 130 ~ga~~-------~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 130 HGADP-------TKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCCT-------TCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred cCCCC-------cccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99998 7788999999999877 89999999999886
No 61
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=145.05 Aligned_cols=110 Identities=18% Similarity=0.139 Sum_probs=74.8
Q ss_pred hhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhc
Q psy2185 17 ETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARA 96 (136)
Q Consensus 17 ~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 96 (136)
+.+.+++. +..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.|+++ +
T Consensus 90 ~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~ 161 (261)
T 2xai_A 90 QHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV-------N 161 (261)
T ss_dssp HTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCT-------T
T ss_pred HCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC-------C
Confidence 34444443 223555555566666666666666666666666666666666666666666666666666665 2
Q ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 97 QSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 97 ~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 162 -~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g 199 (261)
T 2xai_A 162 -QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEG 199 (261)
T ss_dssp -CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred -CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 36678888888888888888888888888888888776
No 62
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=4.1e-26 Score=140.20 Aligned_cols=102 Identities=23% Similarity=0.138 Sum_probs=94.8
Q ss_pred ccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCC-CCCCC
Q psy2185 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQST-LFPAS 104 (136)
Q Consensus 26 ~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~~~~t 104 (136)
+..|.||||+|+..|+.+++++|++ +++++.++..|+||||+|+..|+.+++++|++.|+++ +..+ ..|+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-------~~~~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-------DHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-------TCCCSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-------CcCCCCCCCC
Confidence 5678999999999999999999999 9999999999999999999999999999999999987 5555 78999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 105 PLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 105 ~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|||+|+..|+.+++++|+++|++++.+|..|
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 143 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEVEDERG 143 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTS
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcCCCCCC
Confidence 9999999999999999999999999998876
No 63
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.6e-25 Score=129.33 Aligned_cols=101 Identities=32% Similarity=0.404 Sum_probs=96.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHH
Q psy2185 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLH 107 (136)
Q Consensus 28 ~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~ 107 (136)
+|.||||+|+..|+.+++++|++++++++..+..|.||||+|+..++.+++++|++.++++ ...+..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-------NAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-------TCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-------cccCCCCCcHHH
Confidence 4899999999999999999999999999999999999999999999999999999999987 677889999999
Q ss_pred HHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 108 LASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 108 ~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+|+..|+.+++++|+++|++++.+|..|
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 101 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGADVNAKDKNG 101 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHcChHHHHHHHHHcCCCCcccCCCC
Confidence 9999999999999999999999988766
No 64
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=9.8e-26 Score=147.08 Aligned_cols=123 Identities=21% Similarity=0.199 Sum_probs=92.1
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.++ +.+.+++.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++
T Consensus 68 ~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (285)
T 3d9h_A 68 IHGHQLSLRNLI-SQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQ 146 (285)
T ss_dssp HTTCHHHHHHHH-HTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHH
Confidence 334445554444 5678888889999999999999999999999999999999888899999999999999999999999
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.++++. .+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 147 ~g~~~~--------~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g 190 (285)
T 3d9h_A 147 HGASVQ--------PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL 190 (285)
T ss_dssp TTCCSS--------CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred CCCCCC--------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 887751 12235666666666666666666666666665555443
No 65
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=1e-26 Score=146.62 Aligned_cols=107 Identities=19% Similarity=0.145 Sum_probs=101.1
Q ss_pred hhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh-CCChhHhhhhhccCCC
Q psy2185 22 LLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRT-HPGLIQAYNARAQSTL 100 (136)
Q Consensus 22 ~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~ 100 (136)
++..+..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|++. ++++ +..+.
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-------~~~d~ 138 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-------NQQNK 138 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-------CCCCT
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-------cccCC
Confidence 455678999999999999999999999999999999999999999999999999999999998 8887 77889
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 101 FPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 101 ~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 139 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 173 (222)
T 3ehr_A 139 LGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEK 173 (222)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Confidence 99999999999999999999999999999999876
No 66
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=2.3e-25 Score=141.08 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=106.5
Q ss_pred hhHHHHHHHHHhhhhhhhh-----hhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccC-------------CCCCH
Q psy2185 4 YNNLKRKSRDMETETEDEL-----LMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNS-------------RHETA 65 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~-----~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-------------~g~t~ 65 (136)
..+..+.++.++ +.+.++ +..|..|.||||+|+..|+.+++++|+++|++++.++. .|.||
T Consensus 46 ~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~ 124 (232)
T 2rfa_A 46 LYDNLEAAMVLM-EAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHP 124 (232)
T ss_dssp HTTCHHHHHHHH-HHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSH
T ss_pred HcCCHHHHHHHH-HcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCH
Confidence 344445555444 566665 56677999999999999999999999999999988765 79999
Q ss_pred HHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHH----HHHHhCCCCc------chhhccC
Q psy2185 66 LDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYL----QQKVQSDFCS------SKVTRRF 135 (136)
Q Consensus 66 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~----~~Ll~~g~~~------~~~~~~g 135 (136)
||+|+..|+.+++++|++.|+++ +..+..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|
T Consensus 125 L~~A~~~~~~~~v~~Ll~~ga~~-------~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g 197 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIEHGADI-------RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQG 197 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-------TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTS
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC-------CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCC
Confidence 99999999999999999999998 77889999999999999999988 9999999988 4677665
No 67
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.9e-25 Score=133.52 Aligned_cols=111 Identities=22% Similarity=0.231 Sum_probs=100.3
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.+ .+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+
T Consensus 42 ~~~~~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 42 AQYGHFSTTEVL-LRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp HHHTCHHHHHHH-HTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHH-HHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 334444555444 5788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHH
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQK 121 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~L 121 (136)
+.|+++ ...+..|.||||+|+..|+.+++++|
T Consensus 121 ~~ga~~-------~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 121 KYGADV-------HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCCc-------cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999998 77888999999999999999999987
No 68
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=1.9e-25 Score=140.92 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=51.7
Q ss_pred ccCCchHHHHHHHcCCHHHHHHHHhcC--CCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCC
Q psy2185 26 TKDNETALHCAAQYGHTPVVSQLLEHS--CDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPA 103 (136)
Q Consensus 26 ~~~g~t~l~~a~~~g~~~~~~~ll~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 103 (136)
+..|.||||+|+..|+.+++++|++.| ++++.++..|.||||+|+..++.+++++|++.|+++ ...+..|+
T Consensus 69 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-------~~~~~~g~ 141 (228)
T 2dzn_A 69 DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-------RIKDKFNQ 141 (228)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-------CCCCTTSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-------cccCCCCC
Confidence 344444444444444444444444444 344444444444444444444444444444444443 44455556
Q ss_pred CHHHHHHHcCcHHHHHHHHhCC-CCcchhhccC
Q psy2185 104 SPLHLASRNGHRFYLQQKVQSD-FCSSKVTRRF 135 (136)
Q Consensus 104 t~l~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~g 135 (136)
||||+|+..|+.+++++|+++| ++++.+|..|
T Consensus 142 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g 174 (228)
T 2dzn_A 142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTS
T ss_pred CHHHHHHHcCCHHHHHHHHhcCcccccCcCCCC
Confidence 6666666666666666666655 5555555444
No 69
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=2.4e-25 Score=141.27 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=80.6
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 5 NNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
.+..+.++.+ .+.|.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.
T Consensus 21 ~g~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 99 (237)
T 3b7b_A 21 AGHVDICHML-VQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSN 99 (237)
T ss_dssp HTCHHHHHHH-HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred cCcHHHHHHH-HHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 3334444444 455777777777788888888888888888888888877777777778888888888888888888777
Q ss_pred C-CChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhcc
Q psy2185 85 H-PGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRR 134 (136)
Q Consensus 85 ~-~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~ 134 (136)
+ .++ ...+..|.||||+|+..|+.+++++|+++|++++.++..
T Consensus 100 ~~~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 143 (237)
T 3b7b_A 100 GQMDV-------NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNE 143 (237)
T ss_dssp TCCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCc-------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCC
Confidence 6 333 334444555555555555555555555555555554443
No 70
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=7.6e-26 Score=145.27 Aligned_cols=116 Identities=17% Similarity=0.093 Sum_probs=103.5
Q ss_pred HHhhhhhhhhhhh-----------ccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCC-------------CCCHHHH
Q psy2185 13 DMETETEDELLML-----------TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSR-------------HETALDL 68 (136)
Q Consensus 13 ~ll~~~~~~~~~~-----------~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-------------g~t~l~~ 68 (136)
+++.+.+.+++.. |..|.||||+|+..|+.+++++|+++|++++.++.. |.||||+
T Consensus 63 ~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~ 142 (256)
T 2etb_A 63 MPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSL 142 (256)
T ss_dssp HHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHH
T ss_pred HHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHH
Confidence 4445667776633 367999999999999999999999999999998876 9999999
Q ss_pred HHHcCCHHHHHHHHH---hCCChhHhhhhhccCCCCCCCHHHHHHH--cCcHH-------HHHHHHhCCCCc-------c
Q psy2185 69 AAQYGRLETVDTLVR---THPGLIQAYNARAQSTLFPASPLHLASR--NGHRF-------YLQQKVQSDFCS-------S 129 (136)
Q Consensus 69 a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~~~~t~l~~A~~--~g~~~-------~~~~Ll~~g~~~-------~ 129 (136)
|+..|+.+++++|++ .|+++ +..+..|+||||+|+. .++.+ ++++|+++|+++ +
T Consensus 143 A~~~~~~~~v~~Ll~~~~~ga~~-------n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 215 (256)
T 2etb_A 143 AACTKQWDVVTYLLENPHQPASL-------EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE 215 (256)
T ss_dssp HHHTTCHHHHHHHHHCSSCCCCT-------TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGG
T ss_pred HHHcCCHHHHHHHHhccccCCCc-------CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccc
Confidence 999999999999999 89988 7888999999999999 78888 999999999999 8
Q ss_pred hhhccC
Q psy2185 130 KVTRRF 135 (136)
Q Consensus 130 ~~~~~g 135 (136)
.+|..|
T Consensus 216 ~~d~~g 221 (256)
T 2etb_A 216 ISNHQG 221 (256)
T ss_dssp CCCTTS
T ss_pred ccCCCC
Confidence 888776
No 71
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=3.9e-26 Score=148.44 Aligned_cols=108 Identities=23% Similarity=0.240 Sum_probs=84.3
Q ss_pred hhhhhccCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcc--------------------------------------cCC
Q psy2185 21 ELLMLTKDNETALHCAAQYGHTPVVSQLLEHSC-DPTIR--------------------------------------NSR 61 (136)
Q Consensus 21 ~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~-~~~~~--------------------------------------~~~ 61 (136)
.+|..|..|.||||+|+..|+.+++++|++.|+ +++.. +..
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA 182 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence 367777777788888887787777777777765 44433 344
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHh-CCCCcchhhccC
Q psy2185 62 HETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQ-SDFCSSKVTRRF 135 (136)
Q Consensus 62 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~-~g~~~~~~~~~g 135 (136)
|+||||+|+..|+.+++++|++.|+++ +..+..|+||||+|+..|+.+++++|++ .|++++.+|..|
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~-------n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g 250 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADV-------NVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDG 250 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCC-------CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCC
Confidence 778888888888888888888888887 6677888888888888888888888888 788888888776
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=5.5e-26 Score=137.52 Aligned_cols=117 Identities=20% Similarity=0.093 Sum_probs=105.5
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.+ .+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++
T Consensus 45 ~~~~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 45 AHGQIAVVEFL-LQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp HTTCHHHHHHH-HHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HCCCHHHHHHH-HHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 33444555444 46689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCc
Q psy2185 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCS 128 (136)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~ 128 (136)
.|+++ ...+..|.|||++|+..|+.+++++|++++.+.
T Consensus 124 ~g~~~-------~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 124 SGADP-------TIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp TTCCT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCC-------CCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99998 778889999999999999999999999987664
No 73
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=6.5e-26 Score=147.94 Aligned_cols=106 Identities=15% Similarity=0.042 Sum_probs=70.7
Q ss_pred hhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCC
Q psy2185 21 ELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTL 100 (136)
Q Consensus 21 ~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 100 (136)
+++.+|..|.||||+|+..|+.+++++|++.|++++.+ +|+||||+|+..|+.+++++|++.|+++ ...+.
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-------~~~d~ 93 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDD-------SQFDD 93 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT-------TCCCT
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC-------CCcCC
Confidence 35666666777777777777777777777666666555 3667777777767777777777666665 45566
Q ss_pred CCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 101 FPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 101 ~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.|+||||+|+..|+.+++++|+++|++++.++..|
T Consensus 94 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 128 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTG 128 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSG
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Confidence 66677777777666667777776666666666544
No 74
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.9e-25 Score=141.09 Aligned_cols=129 Identities=18% Similarity=0.075 Sum_probs=85.7
Q ss_pred HHHHHHHHhh---hhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 7 LKRKSRDMET---ETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 7 ~~~~~~~ll~---~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+.++.++. ..+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++
T Consensus 21 ~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 100 (241)
T 1k1a_A 21 NLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLD 100 (241)
T ss_dssp CHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3344444443 4667777777778888888888888888888888888777777777888888888888888877777
Q ss_pred hCC----ChhHhhh--------------------------hhccCC-CCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhh
Q psy2185 84 THP----GLIQAYN--------------------------ARAQST-LFPASPLHLASRNGHRFYLQQKVQSDFCSSKVT 132 (136)
Q Consensus 84 ~~~----~~~~~~~--------------------------~~~~~~-~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~ 132 (136)
.+. ++..... +....+ ..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 101 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 180 (241)
T 1k1a_A 101 SAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQM 180 (241)
T ss_dssp HSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBC
T ss_pred cCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 765 2200000 012223 456677777777777777777777777776666
Q ss_pred ccC
Q psy2185 133 RRF 135 (136)
Q Consensus 133 ~~g 135 (136)
..|
T Consensus 181 ~~g 183 (241)
T 1k1a_A 181 YSG 183 (241)
T ss_dssp TTS
T ss_pred CCC
Confidence 554
No 75
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.6e-25 Score=142.09 Aligned_cols=113 Identities=21% Similarity=0.098 Sum_probs=98.8
Q ss_pred hhhhhhhhhh---ccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhh
Q psy2185 16 TETEDELLML---TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAY 92 (136)
Q Consensus 16 ~~~~~~~~~~---~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 92 (136)
.+.+.+++.. +..+.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|++.|+++
T Consensus 5 l~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~---- 80 (229)
T 2vge_A 5 LRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV---- 80 (229)
T ss_dssp -----CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----
T ss_pred hccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----
Confidence 3455555543 456788999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhh-ccC
Q psy2185 93 NARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVT-RRF 135 (136)
Q Consensus 93 ~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~-~~g 135 (136)
+..+..|+||||+|+..|+.+++++|+++|++++.++ ..|
T Consensus 81 ---n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g 121 (229)
T 2vge_A 81 ---NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDG 121 (229)
T ss_dssp ---TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTT
T ss_pred ---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCC
Confidence 7788899999999999999999999999999999886 344
No 76
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=6.5e-26 Score=145.57 Aligned_cols=118 Identities=16% Similarity=0.039 Sum_probs=103.8
Q ss_pred HHHHhhhhhhhhhh----hccCCchHHHHHHHc---CCHHHHHHHHhcCCCCCc-----------ccCCCCCHHHHHHHc
Q psy2185 11 SRDMETETEDELLM----LTKDNETALHCAAQY---GHTPVVSQLLEHSCDPTI-----------RNSRHETALDLAAQY 72 (136)
Q Consensus 11 ~~~ll~~~~~~~~~----~~~~g~t~l~~a~~~---g~~~~~~~ll~~~~~~~~-----------~~~~g~t~l~~a~~~ 72 (136)
+.+.+...+.+++. .|..|.||||+|+.. |+.+++++|++.|++++. ++..|.||||+|+..
T Consensus 21 ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 100 (256)
T 2etb_A 21 LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100 (256)
T ss_dssp HHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHc
Confidence 33455578889998 899999999999999 999999999999877653 236799999999999
Q ss_pred CCHHHHHHHHHhCCChhHhhhhhccCCCC-------------CCCHHHHHHHcCcHHHHHHHHh---CCCCcchhhccC
Q psy2185 73 GRLETVDTLVRTHPGLIQAYNARAQSTLF-------------PASPLHLASRNGHRFYLQQKVQ---SDFCSSKVTRRF 135 (136)
Q Consensus 73 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~-------------~~t~l~~A~~~g~~~~~~~Ll~---~g~~~~~~~~~g 135 (136)
|+.+++++|++.|+++ ...+.. |.||||+|+..|+.+++++|++ +|++++.+|..|
T Consensus 101 g~~~~v~~Ll~~ga~~-------~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g 172 (256)
T 2etb_A 101 RSLQCVKLLVENGADV-------HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLG 172 (256)
T ss_dssp TCHHHHHHHHHTTCCT-------TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTS
T ss_pred CCHHHHHHHHHcCCCC-------CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCC
Confidence 9999999999999987 444443 9999999999999999999999 999999999877
No 77
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=3.6e-26 Score=137.12 Aligned_cols=106 Identities=18% Similarity=0.097 Sum_probs=96.4
Q ss_pred hhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCC
Q psy2185 22 LLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLF 101 (136)
Q Consensus 22 ~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 101 (136)
.+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+ .|+.+++++|++.|+++ ...+..
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-------~~~d~~ 76 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-------NCADPA 76 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-------CCCCTT
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-------CCcCCC
Confidence 3456778999999999999999999999999999999999999999986 89999999999999988 778889
Q ss_pred CCC-HHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 102 PAS-PLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 102 ~~t-~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|+| |||+|+..|+.+++++|+++|++++.+|..|
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG 111 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTC
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCC
Confidence 999 9999999999999999999999999998776
No 78
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=3.4e-25 Score=144.53 Aligned_cols=111 Identities=18% Similarity=0.123 Sum_probs=82.4
Q ss_pred hhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhh
Q psy2185 16 TETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNAR 95 (136)
Q Consensus 16 ~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 95 (136)
.+.+.+++..+ .|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.++++
T Consensus 145 l~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~------- 216 (285)
T 3d9h_A 145 LQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV------- 216 (285)
T ss_dssp HHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT-------
T ss_pred HHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC-------
Confidence 34555554433 3667777777777777777777777777777777777777777777777777777777766
Q ss_pred ccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 96 AQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 96 ~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
. .+..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 217 ~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 255 (285)
T 3d9h_A 217 N-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEG 255 (285)
T ss_dssp T-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 2 36678899999999999999999999999988888776
No 79
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1e-25 Score=144.11 Aligned_cols=102 Identities=23% Similarity=0.138 Sum_probs=95.7
Q ss_pred ccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCC-CCCCC
Q psy2185 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQST-LFPAS 104 (136)
Q Consensus 26 ~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~~~~t 104 (136)
+..|.||||+|+..|+.+++++|++ +++++.++..|+||||+|+..|+.+++++|++.|+++ +..+ ..|+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-------~~~~~~~g~t 113 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-------DHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-------TCCCSSSCCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-------CcCCCCCCCC
Confidence 3578999999999999999999999 9999999999999999999999999999999999998 5555 78999
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 105 PLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 105 ~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
|||+|+..|+.+++++|+++|++++.+|..|
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 144 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEVEDERG 144 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 9999999999999999999999999998876
No 80
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=1.7e-25 Score=143.84 Aligned_cols=106 Identities=18% Similarity=0.048 Sum_probs=96.6
Q ss_pred hhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCccc--------------CCCCCHHHHHHHcCCHHHHHHHHH---hC
Q psy2185 23 LMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN--------------SRHETALDLAAQYGRLETVDTLVR---TH 85 (136)
Q Consensus 23 ~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~Ll~---~~ 85 (136)
+..|..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|++ .|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 3344589999999999999999999999999999988 589999999999999999999999 88
Q ss_pred CChhHhhhhhccCCCCCCCHHHHHHHcCc---------HHHHHHHHhCCCCc-------chhhccC
Q psy2185 86 PGLIQAYNARAQSTLFPASPLHLASRNGH---------RFYLQQKVQSDFCS-------SKVTRRF 135 (136)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~t~l~~A~~~g~---------~~~~~~Ll~~g~~~-------~~~~~~g 135 (136)
+++ +..+..|+||||+|+..|+ .+++++|+++|+++ +.+|..|
T Consensus 167 a~~-------~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g 225 (260)
T 3jxi_A 167 ADL-------RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG 225 (260)
T ss_dssp CCT-------TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTS
T ss_pred CCC-------cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCC
Confidence 888 7889999999999999887 69999999999998 6677766
No 81
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=1.1e-25 Score=151.04 Aligned_cols=118 Identities=12% Similarity=0.050 Sum_probs=107.3
Q ss_pred HHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCC-----CCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 7 LKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCD-----PTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 7 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
..+.+ ++|.+.|++++..|..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|
T Consensus 152 ~~~~v-~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 230 (364)
T 3ljn_A 152 YLEMI-KILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF 230 (364)
T ss_dssp GHHHH-HHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred hHHHH-HHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 34444 455567999999999999999999999999999999999988 999999999999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhh
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVT 132 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~ 132 (136)
++.|+++ +..+..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 231 l~~gad~-------~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~ 274 (364)
T 3ljn_A 231 VEMGIDV-------NMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQA 274 (364)
T ss_dssp HTTTCCT-------TCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHT
T ss_pred HHcCCCC-------CCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhc
Confidence 9999998 7888999999999999999999999999998875544
No 82
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=1.6e-25 Score=142.25 Aligned_cols=123 Identities=19% Similarity=0.109 Sum_probs=106.1
Q ss_pred hhHHHHHHHHHhhhhhh------hhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccC-CCCCHHHHHHHcCCHH
Q psy2185 4 YNNLKRKSRDMETETED------ELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNS-RHETALDLAAQYGRLE 76 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~------~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~g~t~l~~a~~~~~~~ 76 (136)
..+..+.+..++ +.+. .++..+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+
T Consensus 87 ~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 87 EQGCLASVGVLT-QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HHTCHHHHHHHH-HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHH-hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 344445555555 4443 2677788999999999999999999999999999999987 9999999999999999
Q ss_pred HHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcc--hhhcc
Q psy2185 77 TVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSS--KVTRR 134 (136)
Q Consensus 77 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~--~~~~~ 134 (136)
++++|++.|+++ ...+..|.||||+|+..|+.+++++|+++|+++. ..+..
T Consensus 166 ~v~~Ll~~ga~~-------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~ 218 (236)
T 1ikn_D 166 LVSLLLKCGADV-------NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESE 218 (236)
T ss_dssp HHHHHHTTTCCS-------CCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCC
T ss_pred HHHHHHHcCCCC-------CcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccc
Confidence 999999999998 7788999999999999999999999999999875 44443
No 83
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=7.5e-25 Score=145.60 Aligned_cols=131 Identities=19% Similarity=0.132 Sum_probs=103.5
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 83 (136)
..+..+.++.+ .+.|.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++
T Consensus 67 ~~g~~~~v~~L-l~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 67 GYNRVRIVQLL-LQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLS 145 (351)
T ss_dssp HTTCHHHHHHH-HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHH-HHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34444555444 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhHhh-----------------------------------------------------------------------
Q psy2185 84 THPGLIQAY----------------------------------------------------------------------- 92 (136)
Q Consensus 84 ~~~~~~~~~----------------------------------------------------------------------- 92 (136)
.|+++....
T Consensus 146 ~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~ 225 (351)
T 3utm_A 146 HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPK 225 (351)
T ss_dssp TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTT
T ss_pred cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCcc
Confidence 877642100
Q ss_pred ------------hhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 93 ------------NARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 93 ------------~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
.+.+..+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 226 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g 280 (351)
T 3utm_A 226 RKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLG 280 (351)
T ss_dssp HHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 0113456677888888888888888888888888888777665
No 84
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=7.3e-26 Score=145.56 Aligned_cols=126 Identities=20% Similarity=0.164 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhc--------------cCCchHHHHHHHcCCHHHHHHHHh---cCCCCCcccCCCCCHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLT--------------KDNETALHCAAQYGHTPVVSQLLE---HSCDPTIRNSRHETAL 66 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~--------------~~g~t~l~~a~~~g~~~~~~~ll~---~~~~~~~~~~~g~t~l 66 (136)
..+..+.+ +++.+.|++++..+ ..|.||||+|+..|+.+++++|++ .|++++.++..|+|||
T Consensus 102 ~~g~~~~v-~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL 180 (260)
T 3jxi_A 102 ERRCKHYV-ELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180 (260)
T ss_dssp HTTCHHHH-HHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred HcCCHHHH-HHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence 33444555 44556799999998 589999999999999999999999 9999999999999999
Q ss_pred HHHHHcCC---------HHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcch
Q psy2185 67 DLAAQYGR---------LETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSK 130 (136)
Q Consensus 67 ~~a~~~~~---------~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~ 130 (136)
|+|+..++ .+++++|++.|+++..........+..|+||||+|+..|+.+++++|+++|.++..
T Consensus 181 h~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 181 HALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 99999887 78999999998876322222245788999999999999999999999999987643
No 85
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=9.4e-25 Score=141.38 Aligned_cols=121 Identities=18% Similarity=0.181 Sum_probs=108.5
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhh-ccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLML-TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~-~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
+..+..+.++.++ +.+.+++.. +..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|
T Consensus 13 ~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (285)
T 1wdy_A 13 VQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF 91 (285)
T ss_dssp HHTTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCCHHHHHHHH-HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3444455565554 667888877 77899999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchh
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKV 131 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~ 131 (136)
++.|+++ ...+..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 92 l~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 92 LSKGADV-------NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp HHTTCCT-------TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHcCCCC-------CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 9999987 677889999999999999999999999999999876
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=4.2e-26 Score=140.64 Aligned_cols=107 Identities=8% Similarity=-0.134 Sum_probs=87.9
Q ss_pred hhhhc-cCCchHHHHHHHcCCH----HHHHHHHhcCCCCCcccCCCCCHHHHHHHcCC------HHHHHHHHHhCCChhH
Q psy2185 22 LLMLT-KDNETALHCAAQYGHT----PVVSQLLEHSCDPTIRNSRHETALDLAAQYGR------LETVDTLVRTHPGLIQ 90 (136)
Q Consensus 22 ~~~~~-~~g~t~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~Ll~~~~~~~~ 90 (136)
++..+ ..|+||||+|+..++. +++++|+++|++++.++..|+||||+|+..++ .+++++|++.|+++
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi-- 107 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI-- 107 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS--
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC--
Confidence 45555 6788999999988875 48888899999998888889999999888876 57788899988888
Q ss_pred hhhhhccCCCCCC-CHHHHHHHcC-----cHHHHHHHHh-CCCCcchhhccC
Q psy2185 91 AYNARAQSTLFPA-SPLHLASRNG-----HRFYLQQKVQ-SDFCSSKVTRRF 135 (136)
Q Consensus 91 ~~~~~~~~~~~~~-t~l~~A~~~g-----~~~~~~~Ll~-~g~~~~~~~~~g 135 (136)
+.++..|+ ||||+|+..+ +.+++++|++ +|++++.+|..|
T Consensus 108 -----n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G 154 (186)
T 3t8k_A 108 -----TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWG 154 (186)
T ss_dssp -----SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTS
T ss_pred -----CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCC
Confidence 77788888 8999988844 3568888888 899998888876
No 87
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=3.8e-25 Score=143.23 Aligned_cols=104 Identities=19% Similarity=0.143 Sum_probs=95.8
Q ss_pred hccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccC--------------CCCCHHHHHHHcCCHHHHHHHHH---hCCC
Q psy2185 25 LTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNS--------------RHETALDLAAQYGRLETVDTLVR---THPG 87 (136)
Q Consensus 25 ~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~--------------~g~t~l~~a~~~~~~~~~~~Ll~---~~~~ 87 (136)
.|..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++ .|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 556899999999999999999999999999999886 79999999999999999999999 8898
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCc---------HHHHHHHHhCCCCcc-------hhhccC
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGH---------RFYLQQKVQSDFCSS-------KVTRRF 135 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~---------~~~~~~Ll~~g~~~~-------~~~~~g 135 (136)
+ +..+..|+||||+|+..|+ .+++++|+++|++++ .+|..|
T Consensus 177 ~-------~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g 233 (273)
T 2pnn_A 177 I-------SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKG 233 (273)
T ss_dssp T-------TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTS
T ss_pred c-------eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCC
Confidence 8 7788999999999999988 799999999999986 467665
No 88
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=7.1e-26 Score=147.78 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=34.6
Q ss_pred hhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCC-CCHHHHHHHcCCHHHHHHHHHhCC
Q psy2185 17 ETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH-ETALDLAAQYGRLETVDTLVRTHP 86 (136)
Q Consensus 17 ~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~Ll~~~~ 86 (136)
+.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|+.+++++|++.++
T Consensus 83 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 83 FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 153 (285)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 3344444444455555555555555555555555555554444444 355555555555555555544443
No 89
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=4.3e-25 Score=143.70 Aligned_cols=106 Identities=21% Similarity=0.182 Sum_probs=97.0
Q ss_pred hhhhhhh------hhhccCCchHHHHHHHc---CCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Q psy2185 16 TETEDEL------LMLTKDNETALHCAAQY---GHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86 (136)
Q Consensus 16 ~~~~~~~------~~~~~~g~t~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 86 (136)
...|.++ +..+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|+
T Consensus 150 l~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 229 (278)
T 1dcq_A 150 YADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 229 (278)
T ss_dssp HHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3456553 34478899999999999 89999999999999999999999999999999999999999999999
Q ss_pred ChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCc
Q psy2185 87 GLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCS 128 (136)
Q Consensus 87 ~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~ 128 (136)
++ ..++..|.||||+|+..|+.+++++|+++|++.
T Consensus 230 d~-------~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 230 SI-------EIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CC-------CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 98 788999999999999999999999999998874
No 90
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=6.9e-25 Score=145.75 Aligned_cols=124 Identities=17% Similarity=0.117 Sum_probs=109.0
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCC----HHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHH
Q psy2185 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGH----TPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLET 77 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~----~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 77 (136)
|+..+..+.++.++.+.|++++.++..|.|+++.++..+. ..++++|+++|++++.++..|.||||+|+..|+.++
T Consensus 175 A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~ 254 (337)
T 4g8k_A 175 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL 254 (337)
T ss_dssp HHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHH
T ss_pred HHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHH
Confidence 3455566777778778899999999999999998776544 457889999999999999999999999999999999
Q ss_pred HHHHHHh-CCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhh
Q psy2185 78 VDTLVRT-HPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVT 132 (136)
Q Consensus 78 ~~~Ll~~-~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~ 132 (136)
++.|+.. +.++ +.++..|+||||+|++.|+.+++++|+++|++++.+|
T Consensus 255 v~~Ll~~~~~~v-------n~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 255 VQRLLEQEHIEI-------NDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp HHHHHTSTTCCT-------TCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred HHHHHHhcCCcc-------cCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 9999985 6676 6788899999999999999999999999999998765
No 91
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=9.1e-25 Score=149.51 Aligned_cols=131 Identities=21% Similarity=0.233 Sum_probs=80.8
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
++.+..+.++.++ +.|.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+
T Consensus 22 a~~g~~~~v~~Ll-~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 100 (437)
T 1n11_A 22 SFMGHLPIVKNLL-QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL 100 (437)
T ss_dssp HHHTCHHHHHHHH-HTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 3444445554444 446777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HhCCChhHhhh--------------------------hhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhcc
Q psy2185 83 RTHPGLIQAYN--------------------------ARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRR 134 (136)
Q Consensus 83 ~~~~~~~~~~~--------------------------~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~ 134 (136)
+.|+++..... .....+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 101 ~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 178 (437)
T 1n11_A 101 ENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKN 178 (437)
T ss_dssp HHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS
T ss_pred hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCC
Confidence 77766511000 00223344555555555555555555555555555555443
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=3.1e-26 Score=141.22 Aligned_cols=116 Identities=13% Similarity=0.015 Sum_probs=103.1
Q ss_pred HHHHhhhhhhhhhhhccCCchHHHHHHHcCC------HHHHHHHHhcCCCCCcccCCCC-CHHHHHHHcC-----CHHHH
Q psy2185 11 SRDMETETEDELLMLTKDNETALHCAAQYGH------TPVVSQLLEHSCDPTIRNSRHE-TALDLAAQYG-----RLETV 78 (136)
Q Consensus 11 ~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~------~~~~~~ll~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~ 78 (136)
+.++|.+.|++++.+|..|+||||+|+..++ .+++++|+++|++++.+|..|. ||||+|+..+ ..+++
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv 136 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLY 136 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHH
Confidence 5566778999999999999999999999987 6889999999999999999999 9999999844 35689
Q ss_pred HHHHH-hCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhc
Q psy2185 79 DTLVR-THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTR 133 (136)
Q Consensus 79 ~~Ll~-~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~ 133 (136)
++|++ .|+++ ..++..|.||||+|++.|+.+++++|+++....+.+++
T Consensus 137 ~~Ll~~~gad~-------~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 137 KLIFSQSGLQL-------LIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHHHTSTTCCT-------TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred HHHHHhcCCCC-------cccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhcccC
Confidence 99999 99998 88999999999999999999999999987766666554
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=3.5e-25 Score=145.59 Aligned_cols=112 Identities=15% Similarity=0.170 Sum_probs=101.0
Q ss_pred HHHHHHhhhhhhhhhh------hccCCchHHHHHHHc---CCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHH
Q psy2185 9 RKSRDMETETEDELLM------LTKDNETALHCAAQY---GHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVD 79 (136)
Q Consensus 9 ~~~~~ll~~~~~~~~~------~~~~g~t~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 79 (136)
..+..++ ..+.+++. .+..|.||||+|+.. ++.+++++|+++|++++.++..|.||||+|+..|+.++++
T Consensus 165 ~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~ 243 (301)
T 2b0o_E 165 LSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLK 243 (301)
T ss_dssp HHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 3344444 77788887 588999999999997 8999999999999999999999999999999999999999
Q ss_pred HHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCc
Q psy2185 80 TLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCS 128 (136)
Q Consensus 80 ~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~ 128 (136)
+|++.|+++ ...+..|.||||+|+..|+.+++++|+++|++.
T Consensus 244 ~Ll~~gad~-------~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 244 LLLKGRALV-------GTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp HHHHTTCCC-------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHcCCCC-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 999999998 788899999999999999999999999988763
No 94
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.92 E-value=2.1e-24 Score=140.24 Aligned_cols=111 Identities=18% Similarity=0.089 Sum_probs=100.1
Q ss_pred HHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHH-hC
Q psy2185 7 LKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR-TH 85 (136)
Q Consensus 7 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~ 85 (136)
..+.+ ..+...|...+..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|
T Consensus 162 ~~~~v-~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 162 DIETV-LQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp HHHHH-HHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred hHHHH-HHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 33444 44456677788888899999999999999999999999999999999999999999999999999999999 89
Q ss_pred CChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCC
Q psy2185 86 PGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSD 125 (136)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g 125 (136)
+++ ...+..|+||||+|+..|+.+++++|++++
T Consensus 241 ad~-------~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 241 CDI-------SLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCC-------cCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 888 778899999999999999999999999864
No 95
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=8.9e-25 Score=147.29 Aligned_cols=109 Identities=20% Similarity=0.188 Sum_probs=76.8
Q ss_pred hhhhhhccCCchHHHHHHHcC---CHHHHHHHHhcCCCCCc--------ccCCCCCHHHHHHHcCCHHHHHHHHHhC-CC
Q psy2185 20 DELLMLTKDNETALHCAAQYG---HTPVVSQLLEHSCDPTI--------RNSRHETALDLAAQYGRLETVDTLVRTH-PG 87 (136)
Q Consensus 20 ~~~~~~~~~g~t~l~~a~~~g---~~~~~~~ll~~~~~~~~--------~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~ 87 (136)
.+++..+..|.||||+|+..+ +.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.+ .+
T Consensus 226 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 226 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 455666666666666666665 56666666666666654 3446667777777777777777777654 55
Q ss_pred hhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 88 ~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+ +..+..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 306 ~-------n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g 346 (373)
T 2fo1_E 306 K-------DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATD 346 (373)
T ss_dssp T-------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSS
T ss_pred c-------cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCC
Confidence 4 5667788888888888888888888888888888887765
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.4e-24 Score=133.30 Aligned_cols=103 Identities=23% Similarity=0.211 Sum_probs=90.9
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCccc-CCCCCHHHHHHHcCCHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN-SRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~L 81 (136)
+..+..+.++.++. +.+++..|..|.||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.+++++|
T Consensus 52 ~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 129 (183)
T 3deo_A 52 ARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 129 (183)
T ss_dssp HHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHH
Confidence 34444556666665 88999999999999999999999999999999999999888 8899999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHHHcCc
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 114 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~ 114 (136)
++.|+++ ..++..|+||||+|++.++
T Consensus 130 l~~ga~~-------~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 130 VELGADI-------EVEDERGLTALELAREILK 155 (183)
T ss_dssp HHHTCCT-------TCCCTTSCCHHHHHHHHHH
T ss_pred HHcCCCC-------cCCCCCCCCHHHHHHHhcc
Confidence 9999998 6788889999988887643
No 97
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=3.8e-24 Score=135.56 Aligned_cols=124 Identities=19% Similarity=0.145 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCccc-CCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 4 YNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN-SRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 4 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
..+..+.++.++ +.|.+++..+..|.||||+|+..|+.+++++|++.+.+++... ..|.||||+|+..|+.+++++|+
T Consensus 18 ~~g~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll 96 (240)
T 3eu9_A 18 QYGIYERCRELV-EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM 96 (240)
T ss_dssp HTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH
T ss_pred HcCChHHHHHHH-HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH
Confidence 334445555554 6778999999999999999999999999999999999887554 45999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+.++++ ...+..|.||||+|+..|+.+++++|+++|++++.++..|
T Consensus 97 ~~g~~~-------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g 142 (240)
T 3eu9_A 97 KYGADP-------SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG 142 (240)
T ss_dssp HTTCCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCCC-------cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCC
Confidence 999887 6678889999999999999999999999999999888765
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=4.7e-25 Score=141.05 Aligned_cols=116 Identities=23% Similarity=0.208 Sum_probs=100.5
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCccc-CCCCCHHHHHHHcCCHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN-SRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~L 81 (136)
+..+..+.++.++. +.+++.+|..|.||||+||..|+.+++++|+++|++++.++ ..|+||||+|+..|+.+++++|
T Consensus 53 ~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 130 (244)
T 3ui2_A 53 ARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEAL 130 (244)
T ss_dssp HTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34444556666665 88999999999999999999999999999999999999888 8899999999999999999999
Q ss_pred HHhCCChhHhhhhhccCCCCCCCHHHHHH----------------HcCcHHHHHHHHhCCCC
Q psy2185 82 VRTHPGLIQAYNARAQSTLFPASPLHLAS----------------RNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 82 l~~~~~~~~~~~~~~~~~~~~~t~l~~A~----------------~~g~~~~~~~Ll~~g~~ 127 (136)
++.|+++ +..+..|+||||+|+ ..|+.+++++|++++.+
T Consensus 131 l~~ga~~-------~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 131 VELGADI-------EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHTTCCT-------TCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHCCCCC-------CCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 9999998 667777888777776 77899999999986544
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=4.6e-25 Score=127.44 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=91.4
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.+ .+.+.+++..+..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..++.+++++|+
T Consensus 15 ~~~~~~~~v~~l-l~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 93 (123)
T 3aaa_C 15 LKNGDLDEVKDY-VAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLL 93 (123)
T ss_dssp HHTTCHHHHHHH-HHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHH-HHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 334444555554 4678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcH
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHR 115 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~ 115 (136)
+.++++ ...+..|+||||+|...+..
T Consensus 94 ~~ga~~-------~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 94 SKGADK-------TVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp HTTCCT-------TCCCTTSCCHHHHCCCHHHH
T ss_pred HcCCCC-------CCcCCCCCCHHHHhCCHHHH
Confidence 999998 77889999999999544333
No 100
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.1e-25 Score=132.28 Aligned_cols=117 Identities=17% Similarity=0.193 Sum_probs=99.9
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
+..+..+.++.+ .+.+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+
T Consensus 18 ~~~~~~~~~~~L-l~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 96 (137)
T 3c5r_A 18 SIKGDIPSVEYL-LQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLL 96 (137)
T ss_dssp HHHTCHHHHHHH-HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHH-HHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 334444555444 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCC
Q psy2185 83 RTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~ 127 (136)
+.|+++ ...+..|.|||++|+..++.+++++|.+.+..
T Consensus 97 ~~ga~~-------~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 97 SYGASR-------NAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HTTCCT-------TCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HcCCCC-------CCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 999998 78899999999999999999998888776544
No 101
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=4.4e-24 Score=135.26 Aligned_cols=119 Identities=20% Similarity=0.223 Sum_probs=77.6
Q ss_pred hhhhhhhhhc-cCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhh--
Q psy2185 17 ETEDELLMLT-KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYN-- 93 (136)
Q Consensus 17 ~~~~~~~~~~-~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-- 93 (136)
+.+.+++..+ ..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|++.++++.....
T Consensus 63 ~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g 142 (240)
T 3eu9_A 63 SKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG 142 (240)
T ss_dssp HTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCC
Confidence 3344444333 3366666666666666666666666666666666666666666666666666666665544311100
Q ss_pred -------------------------hhccCCC-CCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 94 -------------------------ARAQSTL-FPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 94 -------------------------~~~~~~~-~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+....+. .|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 143 ~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 210 (240)
T 3eu9_A 143 MTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKG 210 (240)
T ss_dssp CCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTS
T ss_pred CcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 0123343 78899999999999999999999999999888776
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=1e-23 Score=141.81 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=101.0
Q ss_pred HHHHHHHhhhhhhhhhhhc--cCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhC
Q psy2185 8 KRKSRDMETETEDELLMLT--KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85 (136)
Q Consensus 8 ~~~~~~ll~~~~~~~~~~~--~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 85 (136)
.+.+..+ ...|++++..+ ..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++.|
T Consensus 213 ~~~v~~L-L~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~G 291 (368)
T 3jue_A 213 LPTMADA-LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291 (368)
T ss_dssp HHHHHHH-HHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHH-HHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCc
Confidence 3444444 47889999988 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy2185 86 PGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDF 126 (136)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~ 126 (136)
+++ ...+..|.||||+|+..|+.+++++|+..+.
T Consensus 292 ad~-------~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 292 ADL-------GARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp CCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCC-------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 998 7888999999999999999999999998653
No 103
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.91 E-value=1.3e-23 Score=119.20 Aligned_cols=93 Identities=23% Similarity=0.265 Sum_probs=84.8
Q ss_pred hhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCC
Q psy2185 22 LLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLF 101 (136)
Q Consensus 22 ~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~ 101 (136)
....+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++.|+++ ...+..
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-------~~~d~~ 89 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-------XAQDKF 89 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-------TCCCTT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-------cccccC
Confidence 4456778999999999999999999999999999999999999999999999999999999999998 778889
Q ss_pred CCCHHHHHHHcCcHHHHHHH
Q psy2185 102 PASPLHLASRNGHRFYLQQK 121 (136)
Q Consensus 102 ~~t~l~~A~~~g~~~~~~~L 121 (136)
|+||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999987
No 104
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=2.3e-23 Score=140.44 Aligned_cols=114 Identities=22% Similarity=0.214 Sum_probs=99.9
Q ss_pred HHHHHHHHhhhhhhhhhh--------hccCCchHHHHHHHcCCHHHHHHHHhcC-CCCCcccCCCCCHHHHHHHcCCHHH
Q psy2185 7 LKRKSRDMETETEDELLM--------LTKDNETALHCAAQYGHTPVVSQLLEHS-CDPTIRNSRHETALDLAAQYGRLET 77 (136)
Q Consensus 7 ~~~~~~~ll~~~~~~~~~--------~~~~g~t~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~ 77 (136)
..+.+ .++.+.|.+++. .+..|.||||+|+..|+.+++++|++.+ ++++.++..|.||||+|+..|+.++
T Consensus 250 ~~~~v-~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~i 328 (373)
T 2fo1_E 250 QVASA-KLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEV 328 (373)
T ss_dssp HHHHH-HHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred hHHHH-HHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHH
Confidence 33444 555577887775 5668999999999999999999999875 9999999999999999999999999
Q ss_pred HHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHhCCCCc
Q psy2185 78 VDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFCS 128 (136)
Q Consensus 78 ~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~ 128 (136)
+++|++.|+++ ...+..|.|||++|+..|+.+++++|+++|++.
T Consensus 329 v~~Ll~~gad~-------~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 329 VMYLIQQGASV-------EAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHTTCCS-------SCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred HHHHHHcCCCc-------cCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999999998 778899999999999999999999999999874
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=2e-22 Score=135.51 Aligned_cols=103 Identities=18% Similarity=0.112 Sum_probs=96.4
Q ss_pred ccCCchHHHHHHHc-CCHHHHHHHHhcCCCCCccc--CCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCC
Q psy2185 26 TKDNETALHCAAQY-GHTPVVSQLLEHSCDPTIRN--SRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFP 102 (136)
Q Consensus 26 ~~~g~t~l~~a~~~-g~~~~~~~ll~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~ 102 (136)
+..+.|+||.|+.. ++.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.|+++ +..+..|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-------n~~d~~G 268 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-------NQADSAG 268 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-------TCCCTTS
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-------CCCCCCC
Confidence 34567899999999 99999999999999999888 88999999999999999999999999998 7788999
Q ss_pred CCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 103 ASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 103 ~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G 301 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGADLGARDSEG 301 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCC
Confidence 999999999999999999999999999999876
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.9e-21 Score=127.81 Aligned_cols=100 Identities=17% Similarity=0.088 Sum_probs=93.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCc------ccCCCCCHHHHHHHc---CCHHHHHHHHHhCCChhHhhhhhccCC
Q psy2185 29 NETALHCAAQYGHTPVVSQLLEHSCDPTI------RNSRHETALDLAAQY---GRLETVDTLVRTHPGLIQAYNARAQST 99 (136)
Q Consensus 29 g~t~l~~a~~~g~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 99 (136)
..++|+.|+..|+.+.++.++..|++++. .+..|.||||+|+.. ++.+++++|++.|+++ +..+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-------n~~d 223 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-------DAKA 223 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-------TCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-------CCCC
Confidence 45779999999999999999999999987 688999999999997 8999999999999998 7788
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 100 LFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 100 ~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 224 ~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G 259 (301)
T 2b0o_E 224 ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG 259 (301)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 899999999999999999999999999999999877
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1.5e-21 Score=135.97 Aligned_cols=100 Identities=17% Similarity=0.085 Sum_probs=93.9
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCCcc------cCCCCCHHHHHHH---cCCHHHHHHHHHhCCChhHhhhhhccCC
Q psy2185 29 NETALHCAAQYGHTPVVSQLLEHSCDPTIR------NSRHETALDLAAQ---YGRLETVDTLVRTHPGLIQAYNARAQST 99 (136)
Q Consensus 29 g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 99 (136)
..+.||.|+..|+.+.++.|++.|++++.+ +..|.||||+|+. .|+.+++++|++.|+++ +..+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-------n~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-------DAKA 204 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-------TCCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-------CccC
Confidence 347799999999999999999999999877 7889999999977 89999999999999998 7889
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 100 LFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 100 ~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 240 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAG 240 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 999999999999999999999999999999999887
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=3.2e-21 Score=125.47 Aligned_cols=100 Identities=21% Similarity=0.116 Sum_probs=92.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCC------cccCCCCCHHHHHHHc---CCHHHHHHHHHhCCChhHhhhhhccCC
Q psy2185 29 NETALHCAAQYGHTPVVSQLLEHSCDPT------IRNSRHETALDLAAQY---GRLETVDTLVRTHPGLIQAYNARAQST 99 (136)
Q Consensus 29 g~t~l~~a~~~g~~~~~~~ll~~~~~~~------~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 99 (136)
..++|+.|+..|+.+.+..++..|.+++ ..+..|.||||+|+.. ++.+++++|++.|+++ +.++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-------n~~d 202 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-------DKQT 202 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-------TCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-------cccC
Confidence 4578999999999999999999998853 4478899999999999 8999999999999998 7788
Q ss_pred CCCCCHHHHHHHcCcHHHHHHHHhCCCCcchhhccC
Q psy2185 100 LFPASPLHLASRNGHRFYLQQKVQSDFCSSKVTRRF 135 (136)
Q Consensus 100 ~~~~t~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g 135 (136)
..|+||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g 238 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGKASIEIANESG 238 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCC
Confidence 999999999999999999999999999999999877
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=2.5e-20 Score=102.54 Aligned_cols=84 Identities=31% Similarity=0.338 Sum_probs=74.4
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 82 (136)
++.+..+.++. +.+.|.+++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus 10 ~~~~~~~~v~~-Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll 88 (93)
T 1n0q_A 10 ARNGHLEVVKL-LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88 (93)
T ss_dssp HHHTCHHHHHH-HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHH-HHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34444455544 45678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCC
Q psy2185 83 RTHPG 87 (136)
Q Consensus 83 ~~~~~ 87 (136)
+.|++
T Consensus 89 ~~ga~ 93 (93)
T 1n0q_A 89 EAGAY 93 (93)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 98864
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.82 E-value=8e-22 Score=132.99 Aligned_cols=97 Identities=22% Similarity=0.224 Sum_probs=45.0
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCC---CcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCH
Q psy2185 29 NETALHCAAQYGHTPVVSQLLEHSCDP---TIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASP 105 (136)
Q Consensus 29 g~t~l~~a~~~g~~~~~~~ll~~~~~~---~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~ 105 (136)
+.||||+|+..|+.+++++|++.|+.. ...+..+.||||+|+..|+.+++++|++.|++...... ... . +||
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i--~~~--~-~Tp 166 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI--QAE--N-YHA 166 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHH--SHH--H-HHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccc--CCC--C-CCH
Confidence 345555555555555555555554421 11223344555555555555555555555543211000 000 1 455
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCcch
Q psy2185 106 LHLASRNGHRFYLQQKVQSDFCSSK 130 (136)
Q Consensus 106 l~~A~~~g~~~~~~~Ll~~g~~~~~ 130 (136)
||+|+..|+.+++++|+++|++++.
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~~~ 191 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTEAT 191 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGGHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCccch
Confidence 5555555555555555555555443
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=9.3e-21 Score=127.82 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=89.4
Q ss_pred chhhHHHHHHHHHhhhhhhh---hhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCC---CcccCCCCCHHHHHHHcCCH
Q psy2185 2 SEYNNLKRKSRDMETETEDE---LLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDP---TIRNSRHETALDLAAQYGRL 75 (136)
Q Consensus 2 a~~~~~~~~~~~ll~~~~~~---~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~---~~~~~~g~t~l~~a~~~~~~ 75 (136)
|+..+..+.++.++. .+.. .+..+..|.||||+|+..|+.+++++|+++|+++ +..+.. .||||+|+..|+.
T Consensus 99 Aa~~G~~e~v~~Ll~-~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~ 176 (376)
T 2aja_A 99 AAITGCSSALDTLCL-LLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHL 176 (376)
T ss_dssp HHHHCCHHHHHHHTT-C--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHH-cCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCH
Confidence 344455566666654 4431 1233456789999999999999999999999763 233333 8999999999999
Q ss_pred HHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHH-HcCcHHHHHHHHhCCCC
Q psy2185 76 ETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLAS-RNGHRFYLQQKVQSDFC 127 (136)
Q Consensus 76 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~-~~g~~~~~~~Ll~~g~~ 127 (136)
+++++|++.|+++... ..+..|.||||+|+ ..|+.+++++|+++|++
T Consensus 177 eiv~~Ll~~ga~~~~~-----~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 177 HVLNRLCELAPTEATA-----MIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHHHHHSCGGGHHH-----HHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred HHHHHHHHcCCccchh-----ccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 9999999999986320 13445789999999 99999999999998753
No 112
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.80 E-value=5.4e-20 Score=122.05 Aligned_cols=96 Identities=15% Similarity=0.023 Sum_probs=85.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCc-ccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHH
Q psy2185 33 LHCAAQYGHTPVVSQLLEHSCDPTI-RNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASR 111 (136)
Q Consensus 33 l~~a~~~g~~~~~~~ll~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~ 111 (136)
.|.|+..+..+++++|++.|++++. ++..|+||||+|+..|+.+++++|++.|+++ ...+..|+||||+|+.
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-------n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-------LYGDNMGESCLVKAVK 173 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-------TBCCTTCCCHHHHHHH
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-------CCcCCCCCCHHHHHHH
Confidence 4777878888999999999999999 8999999999999999999999999999998 7788999999999999
Q ss_pred cCc---HHHHHHHHhCC-CCcchhhccC
Q psy2185 112 NGH---RFYLQQKVQSD-FCSSKVTRRF 135 (136)
Q Consensus 112 ~g~---~~~~~~Ll~~g-~~~~~~~~~g 135 (136)
.|+ .++++.|++++ ++++.+|..|
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~~~~~d~~g 201 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPCLILEDSMN 201 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGGGGEECTTC
T ss_pred hcccccHHHHHHHHHhhhccccCCCCCC
Confidence 999 78888888876 7788888776
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.79 E-value=8.5e-20 Score=104.00 Aligned_cols=93 Identities=24% Similarity=0.270 Sum_probs=79.8
Q ss_pred hHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 5 NNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 5 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
.+..+.++. +.+.+.+++..|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|++.
T Consensus 19 ~~~~~~~~~-Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 97 (115)
T 2l6b_A 19 NGHAEEVKK-LLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAK 97 (115)
T ss_dssp HTCHHHHHH-HTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred cCCHHHHHH-HHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 334444544 4567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHhhhhhccCCCCCCCH
Q psy2185 85 HPGLIQAYNARAQSTLFPASP 105 (136)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~t~ 105 (136)
|+++ +..+..+.||
T Consensus 98 ga~~-------n~~~~~~~~~ 111 (115)
T 2l6b_A 98 GADV-------NARSWGSSHH 111 (115)
T ss_dssp SSSH-------HHHSCCCC--
T ss_pred CCCC-------CcCCcccccc
Confidence 9998 5556667766
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=3.6e-17 Score=92.51 Aligned_cols=78 Identities=26% Similarity=0.316 Sum_probs=69.0
Q ss_pred hhhHHHHHHHHHhhhhhhhhhhhccCCchHHHHHHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHH
Q psy2185 3 EYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81 (136)
Q Consensus 3 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 81 (136)
+..+..+.++.++ +.+.+++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|
T Consensus 32 ~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 32 ARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 3444455565555 66899999999999999999999999999999999999999999999999999999999999876
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=70.93 E-value=4.1 Score=17.77 Aligned_cols=19 Identities=11% Similarity=0.074 Sum_probs=15.3
Q ss_pred HHHHHHHcCcHHHHHHHHh
Q psy2185 105 PLHLASRNGHRFYLQQKVQ 123 (136)
Q Consensus 105 ~l~~A~~~g~~~~~~~Ll~ 123 (136)
-+..||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 4678899999999888853
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=57.29 E-value=35 Score=23.75 Aligned_cols=62 Identities=15% Similarity=0.014 Sum_probs=38.2
Q ss_pred HHHcCCHHHHHHHHhcCCCCCcccCCCCCHHHHHHHcCCHHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcH
Q psy2185 36 AAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHR 115 (136)
Q Consensus 36 a~~~g~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~ 115 (136)
.+..|+...|+..+..|.++.-+ .|....+..++. ....-|.|-+|+|.+..+.
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~----lt~~e~~lln~~----------------------~af~~g~tlvhlair~~r~ 82 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQ----LTADEVRLLNRP----------------------SAFDVGYTLVHLAIRFQRQ 82 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCC----CCHHHHHHHCCT----------------------TTCCTTCCHHHHHHHTTCH
T ss_pred HHHcCChhHHHHHHhcCCchhcc----cCHHHHHHhCCC----------------------cccccCchhhhhhhhhhhh
Confidence 45668888888888777776432 233333322211 1123467888888888887
Q ss_pred HHHHHHHh
Q psy2185 116 FYLQQKVQ 123 (136)
Q Consensus 116 ~~~~~Ll~ 123 (136)
+++..|+.
T Consensus 83 ~~l~~ll~ 90 (454)
T 3zrh_A 83 DMLAILLT 90 (454)
T ss_dssp HHHHHHHH
T ss_pred hHHHHhhh
Confidence 87777775
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=41.94 E-value=87 Score=21.89 Aligned_cols=25 Identities=20% Similarity=0.278 Sum_probs=22.1
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHh
Q psy2185 60 SRHETALDLAAQYGRLETVDTLVRT 84 (136)
Q Consensus 60 ~~g~t~l~~a~~~~~~~~~~~Ll~~ 84 (136)
..|.|.+|+|.++.+.+++..|+..
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhhc
Confidence 4689999999999999999988873
No 118
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=22.43 E-value=31 Score=19.45 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=20.4
Q ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHhCCC
Q psy2185 97 QSTLFPASPLHLASRNGHRFYLQQKVQSDF 126 (136)
Q Consensus 97 ~~~~~~~t~l~~A~~~g~~~~~~~Ll~~g~ 126 (136)
.+|..-..++..|+..++.++++-||+.-.
T Consensus 30 KkDkLykDAietAa~S~d~elaEeLL~yFV 59 (125)
T 3qil_A 30 KKDSLYKDAMQYASESKDTELAEELLQWFL 59 (125)
T ss_dssp SCCCCSSHHHHTTTSSCCSHHHHHHHHHHT
T ss_pred HhcccHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455566677777887777777777766433
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=22.33 E-value=1.4e+02 Score=17.97 Aligned_cols=49 Identities=10% Similarity=-0.043 Sum_probs=29.9
Q ss_pred HHHHHHHcCC-HHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCcHHHHHHHHh-CCCCc
Q psy2185 65 ALDLAAQYGR-LETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQ-SDFCS 128 (136)
Q Consensus 65 ~l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~~~~Ll~-~g~~~ 128 (136)
.++.+...|. .+++++|.+.+.-+ -+...|..+|..++.+.|++ .|.+.
T Consensus 95 af~~~l~lGdv~~~i~lL~~~~r~~---------------eA~~~A~t~g~~~~a~~~~~~~~~~~ 145 (177)
T 3mkq_B 95 MLLNTFYNNSTKERSSIFAEGGSLP---------------LAYAVAKANGDEAAASAFLEQAEVDE 145 (177)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTTCHH---------------HHHHHHHHTTCHHHHHHHHHHTTCCG
T ss_pred HHHHHHHcCCHHHHHHHHHHCCChH---------------HHHHHHHHcCcHHHHHHHHHHhCCcc
Confidence 4444544455 34555665544333 56777888898888877775 56553
No 120
>3hgl_A Effector protein hopab2; five helices, hypersensitive response elicitation, ligase, secreted, UBL conjugation, UBL conjugation pathway; 1.90A {Pseudomonas syringae PV} PDB: 3hgk_E
Probab=22.10 E-value=50 Score=16.98 Aligned_cols=15 Identities=27% Similarity=0.018 Sum_probs=12.0
Q ss_pred HHHHHHHHhCCCCcc
Q psy2185 115 RFYLQQKVQSDFCSS 129 (136)
Q Consensus 115 ~~~~~~Ll~~g~~~~ 129 (136)
..+++.|.+.|+|+.
T Consensus 10 n~IVqQLv~AGADLA 24 (85)
T 3hgl_A 10 NSIVQQLVSEGADIS 24 (85)
T ss_dssp HHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHcCCCHH
Confidence 368889999998874
No 121
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=22.01 E-value=88 Score=15.68 Aligned_cols=24 Identities=21% Similarity=0.177 Sum_probs=15.7
Q ss_pred HHHHHHHHHhCCChhHhhhhhccCCCCCCCHHHHHHHcCc
Q psy2185 75 LETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 114 (136)
Q Consensus 75 ~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~ 114 (136)
..+.++|...|+. ++|++|...|-
T Consensus 13 e~I~~fL~~~Gp~----------------~AL~IAK~LGl 36 (72)
T 3eyi_A 13 EDIYRFLKDNGPQ----------------RALVIAQALGM 36 (72)
T ss_dssp HHHHHHHHHHCSE----------------EHHHHHHHTTC
T ss_pred HHHHHHHHHcCCc----------------hHHHHHHHhCc
Confidence 3466777766544 67888777664
Done!