RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2185
(136 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 70.4 bits (171), Expect = 7e-16
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 31 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQ 90
T LH A+ GH P+V LL+ P + N + ET L +AA+ G E L++ + +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ-NKAKVN 60
Query: 91 AYNARAQSTLFPASPLHLASRNGH 114
A Q +PLH A+R GH
Sbjct: 61 AKAKDDQ------TPLHCAARIGH 78
Score = 65.4 bits (158), Expect = 5e-14
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81
TK + LH AAQ GHT +V+ LL++ P +S T L +A + G + D L
Sbjct: 327 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 57.7 bits (138), Expect = 2e-11
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85
ET LH AA+ GHT V LL++ + +T L AA+ G V L+ +
Sbjct: 30 NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 89
Query: 86 P 86
Sbjct: 90 A 90
Score = 48.4 bits (114), Expect = 3e-08
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86
+ T LH A+ YG+ +V LL+H D + + L AAQ G + V L++ +
Sbjct: 295 RMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK-NG 353
Query: 87 GLIQAYNARAQSTLFPASPLHLASRNGH 114
++ +PL +A R G+
Sbjct: 354 ASPNEVSSDGT------TPLAIAKRLGY 375
Score = 48.4 bits (114), Expect = 4e-08
Identities = 32/127 (25%), Positives = 44/127 (34%), Gaps = 26/127 (20%)
Query: 14 METETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYG 73
E E +TK T LH AA+YG V LLE P T L +A +
Sbjct: 117 ALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHN 176
Query: 74 RLETVDTL--------------------------VRTHPGLIQAYNARAQSTLFPASPLH 107
L+ V L V L+Q + ++ +PLH
Sbjct: 177 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH 236
Query: 108 LASRNGH 114
LA++ GH
Sbjct: 237 LAAQEGH 243
Score = 40.7 bits (94), Expect = 1e-05
Identities = 31/116 (26%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85
+ T LH AAQ GH +V+ LL + + N T L L AQ G + D L++ H
Sbjct: 228 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK-H 286
Query: 86 PGLIQAYNARAQSTLFPA---------------------------SPLHLASRNGH 114
++ A + L A SPLH A++ GH
Sbjct: 287 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGH 342
Score = 40.7 bits (94), Expect = 2e-05
Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 40/122 (32%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDP------------------------------ 55
KD++T LHCAA+ GHT +V LLE++ +P
Sbjct: 63 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122
Query: 56 ---TIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRN 112
+ T L +AA+YG++ + L+ A +PLH+A +
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLE-RDAHPNAAGKNGL------TPLHVAVHH 175
Query: 113 GH 114
+
Sbjct: 176 NN 177
Score = 38.8 bits (89), Expect = 8e-05
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86
+ T LH AA+ V LL++ + + T L LAAQ G E +V
Sbjct: 196 WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAE----MVALLL 251
Query: 87 GLIQAYNARAQSTLFPASPLHLASRNGH 114
N +S +PLHL ++ GH
Sbjct: 252 SKQANGNLGNKSG---LTPLHLVAQEGH 276
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 62.4 bits (150), Expect = 3e-13
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83
+D +T + AAQ G VV L++ ++ TA LA VD R
Sbjct: 218 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 42.0 bits (97), Expect = 6e-06
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 28 DNETALHCAAQYGHTP-VVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86
TALH AAQ + P V + E + ++ +T + LAAQ GR+E V L++
Sbjct: 186 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ-QG 244
Query: 87 GLIQAYNARAQSTLFPASPLHLASRNGHR 115
++A +A + LA N H
Sbjct: 245 ASVEAVDATDH------TARQLAQANNHH 267
Score = 41.3 bits (95), Expect = 1e-05
Identities = 13/59 (22%), Positives = 16/59 (27%), Gaps = 8/59 (13%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHS--------CDPTIRNSRHETALDLAAQYGRLE 76
+ N T LH A L+ H D + T L LA R
Sbjct: 30 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 88
Score = 37.0 bits (84), Expect = 3e-04
Identities = 15/65 (23%), Positives = 21/65 (32%), Gaps = 4/65 (6%)
Query: 31 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH-ETALDLAAQYGRLETVDTLVRTHPGLI 89
LH A G + + S + I + RH T L A E + L+
Sbjct: 4 IKLHTEAA-GSYAITEPITRESVN--IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60
Query: 90 QAYNA 94
A A
Sbjct: 61 IAAGA 65
Score = 25.8 bits (55), Expect = 2.0
Identities = 9/53 (16%), Positives = 18/53 (33%), Gaps = 9/53 (16%)
Query: 63 ETALDLAAQY-GRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 114
E+ + L + G + + R +I + R + LH + N
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNIIDPRHNR--------TVLHWIASNSS 45
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 56.1 bits (134), Expect = 6e-11
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEH-SCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83
+ +T L A + H +V +LLE + +S +TAL LA + + + L +
Sbjct: 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK 274
Score = 52.3 bits (124), Expect = 2e-09
Identities = 26/127 (20%), Positives = 37/127 (29%), Gaps = 44/127 (34%)
Query: 26 TKDNETALHCAAQYGHTPVV--------------------------------------SQ 47
K TAL AA+ GH V+
Sbjct: 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHL 204
Query: 48 LLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLH 107
LL+H D +R R +T L LA + L V L+ I ++ + + L
Sbjct: 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK------TALL 258
Query: 108 LASRNGH 114
LA
Sbjct: 259 LAVELKL 265
Score = 51.5 bits (122), Expect = 3e-09
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH-ETALDLAAQYGRLETVDTLVRTHP 86
++ L A Q +V QLLE + + T L A Q R + V+ L+R
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Score = 42.3 bits (98), Expect = 4e-06
Identities = 6/34 (17%), Positives = 11/34 (32%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRN 59
D +TAL A + + L + +
Sbjct: 250 DSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 34.9 bits (79), Expect = 0.002
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 10/73 (13%)
Query: 31 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHE----------TALDLAAQYGRLETVDT 80
TA AA YG + L + + +R E TAL AA+ G +E +
Sbjct: 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 166
Query: 81 LVRTHPGLIQAYN 93
L+ + A +
Sbjct: 167 LLDEMGADVNACD 179
Score = 33.4 bits (75), Expect = 0.005
Identities = 17/47 (36%), Positives = 20/47 (42%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYG 73
+ T LH A Q +V LL H DP +R T LAA G
Sbjct: 37 EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 55.5 bits (132), Expect = 8e-11
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEHSCDPT---IRNSRHETALDLAAQYGRL 75
+T+D +TALH A + H P + LL S ++N +TAL LAA G
Sbjct: 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA 58
Score = 51.2 bits (121), Expect = 3e-09
Identities = 15/55 (27%), Positives = 18/55 (32%)
Query: 29 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83
T LH A + V+ LL+ DPT R T L A L
Sbjct: 192 GRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246
Score = 37.4 bits (85), Expect = 2e-04
Identities = 16/61 (26%), Positives = 22/61 (36%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85
+TALH AA G V +L + TAL LA + L++
Sbjct: 42 NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR 101
Query: 86 P 86
P
Sbjct: 102 P 102
Score = 35.8 bits (81), Expect = 7e-04
Identities = 5/26 (19%), Positives = 7/26 (26%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEH 51
T L A + + L H
Sbjct: 222 MYGGRTPLGSALLRPNPILARLLRAH 247
Score = 35.5 bits (80), Expect = 9e-04
Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Query: 63 ETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKV 122
+TAL LA + +D L+ + + + + LHLA+ G +++
Sbjct: 10 DTALHLAVIHQHEPFLDFLLG-FSAGHEYLDLQ---NDLGQTALHLAAILGEASTVEKLY 65
Query: 123 QSDFC 127
+
Sbjct: 66 AAGAG 70
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 55.8 bits (133), Expect = 9e-11
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAA 70
+ +T L+ AA+ G+ +V LL++ DP I N +D A
Sbjct: 257 SNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300
Score = 50.0 bits (118), Expect = 9e-09
Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 3/88 (3%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86
+ T LH + +V L++H + ++ E+ L A + T
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 164
Query: 87 GLIQAYNARAQSTLFPASPLHLASRNGH 114
L + LH
Sbjct: 165 YLYPCLILEDS---MNRTILHHIIITSG 189
Score = 38.1 bits (87), Expect = 1e-04
Identities = 12/66 (18%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 20 DELLMLTKDNETALHCAAQYGHTPVVSQLLEH---SCDPTIRNSRHETALDLAAQYGRLE 76
+ T + E+ + ++ L + ++S +T L++AA+ G +
Sbjct: 214 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNIS 273
Query: 77 TVDTLV 82
VD L+
Sbjct: 274 IVDALL 279
Score = 31.9 bits (71), Expect = 0.016
Identities = 12/86 (13%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 29 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPGL 88
T AA+Y ++ +++ P + + + R +++ + +
Sbjct: 189 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 248
Query: 89 IQAYNARAQSTLFPASPLHLASRNGH 114
NA+ + + L++A+R G+
Sbjct: 249 ANMLNAQDSNGD---TCLNIAARLGN 271
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 54.1 bits (128), Expect = 2e-10
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETV 78
+ALH A+ G P+V L+ D +++N ++T L +A ++ +
Sbjct: 176 SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226
Score = 45.2 bits (105), Expect = 3e-07
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 28 DNETALHCAAQYGHTPVVSQLL----EHSCDPTIRNSRHETALDLAAQY 72
D +T LH A G+ P V +L+ + + I N+ +T L LA
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50
Score = 37.9 bits (86), Expect = 1e-04
Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 7/95 (7%)
Query: 20 DELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVD 79
D + K + L A + +V LL+H + + +AL A+ G L V
Sbjct: 135 DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVR 194
Query: 80 TLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 114
TLVR N + PL +A
Sbjct: 195 TLVR-SGADSSLKNCHNDT------PLMVARSRRV 222
Score = 30.6 bits (67), Expect = 0.048
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 63 ETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKV 122
+T L +A G L V LV + + +PLHLA ++ V
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ---TPLHLAVITTLPSVVRLLV 60
Query: 123 QSDFC 127
+
Sbjct: 61 TAGAS 65
Score = 30.6 bits (67), Expect = 0.051
Identities = 4/20 (20%), Positives = 7/20 (35%)
Query: 26 TKDNETALHCAAQYGHTPVV 45
N+T L A ++
Sbjct: 207 NCHNDTPLMVARSRRVIDIL 226
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 54.3 bits (129), Expect = 3e-10
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQ 71
D T LH AA +G L+E+ CD N +TA D+A +
Sbjct: 230 YDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274
Score = 49.7 bits (117), Expect = 1e-08
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85
K TALH AA G+T V+ L++ D I++ T L AA +G+ E LV +
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE-N 254
Query: 86 PGLIQAYNARAQSTLFPASPLHLASRNGHRF 116
++A N Q + +A + +
Sbjct: 255 LCDMEAVNKVGQ------TAFDVADEDILGY 279
Score = 48.6 bits (114), Expect = 2e-08
Identities = 14/50 (28%), Positives = 18/50 (36%)
Query: 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLET 77
D+ A G T V +LLE D N TAL A ++
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 52.6 bits (125), Expect = 1e-09
Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 8/96 (8%)
Query: 27 KDNETALHCAAQYGHTPV---VSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83
+E AA G + + LL + + + A LAA+ G L ++ L
Sbjct: 88 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE 147
Query: 84 THPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQ 119
P I A LA+ NGH L
Sbjct: 148 LAPTEIMAMIQAENYH-----AFRLAAENGHLHVLN 178
Score = 50.3 bits (119), Expect = 9e-09
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH--ETALDLAAQYGRLETVDTL 81
++ +N A AA+ GH V+++L E + + + A LAA+ G L ++ L
Sbjct: 121 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 180
Query: 82 VRTHP 86
P
Sbjct: 181 CELAP 185
Score = 46.4 bits (109), Expect = 2e-07
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 8/88 (9%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHP 86
K+ A + G +V++ ++ L L+ + L+
Sbjct: 250 KEMHDAFKLSNPDGVFDLVTK------SECLQGFYMLRNLIRRNDEVLLDDIRFLLSI-- 301
Query: 87 GLIQAYNARAQSTLFPASPLHLASRNGH 114
I+A A L LA R G+
Sbjct: 302 PGIKALAPTATIPGDANELLRLALRLGN 329
Score = 44.1 bits (103), Expect = 1e-06
Identities = 9/64 (14%), Positives = 16/64 (25%), Gaps = 6/64 (9%)
Query: 31 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH-----ETALDLAAQYGRLETVDTLVRTH 85
L + LL + + L LA + G L+
Sbjct: 281 RNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS-I 339
Query: 86 PGLI 89
P ++
Sbjct: 340 PSVL 343
Score = 38.7 bits (89), Expect = 7e-05
Identities = 18/109 (16%), Positives = 29/109 (26%), Gaps = 15/109 (13%)
Query: 17 ETEDELLMLTKDNETALHCAAQYGHTPVV-----------SQLLEHSCDPTIRNSRHETA 65
E L+ L+ + V + D + + E
Sbjct: 34 ANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVI 93
Query: 66 LDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGH 114
+AA G +DTL L+ + LA+ NGH
Sbjct: 94 CFVAAITGCSSALDTLCL----LLTSDEIVKVIQAENYQAFRLAAENGH 138
Score = 35.6 bits (81), Expect = 0.001
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEH 51
+ D L A + G+ + LL
Sbjct: 312 TIPGDANELLRLALRLGNQGACALLLSI 339
Score = 35.3 bits (80), Expect = 0.001
Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 18/131 (13%)
Query: 2 SEYNNLKRKSRDMETETEDELLMLTKDNETALHCAAQYGHTPVVSQLLEHSCDP---TIR 58
+E +L +R E + + M+ +N A AA+ GH V+++L E + I+
Sbjct: 134 AENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQ 193
Query: 59 NSRHETALDLAAQYGRLETVDTLV---------------RTHPGLIQAYNARAQSTLFPA 103
+ A G ++ L+ +
Sbjct: 194 AENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 253
Query: 104 SPLHLASRNGH 114
L++ +G
Sbjct: 254 DAFKLSNPDGV 264
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 48.2 bits (113), Expect = 3e-08
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 29 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81
+ET L AA+ G LL++ + I + D+A++ + V L
Sbjct: 156 DETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 35.9 bits (81), Expect = 7e-04
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVRTH 85
+TALH AA +T V+ LL H + ++ + ET L LAA+ G E L+ +
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLD-N 178
Query: 86 PGLIQAYNARAQSTLFPASPLHLASRNGH 114
+ + + P +AS H
Sbjct: 179 FANREITDHMDRL------PRDVASERLH 201
Score = 35.5 bits (80), Expect = 8e-04
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 44 VVSQLLEHSCDPTIR-NSRHETALDLAAQYGRLETVDTLVRTHP 86
V+S LL + + ET+L LAA++ R + L+
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGA 47
Score = 33.6 bits (75), Expect = 0.004
Identities = 5/25 (20%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLE 50
+ A++ H +V +LL+
Sbjct: 186 DHMDRLPRDVASERLHHDIV-RLLD 209
Score = 32.5 bits (72), Expect = 0.011
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 62
K ET+LH AA++ +LL+ D +++
Sbjct: 21 KTGETSLHLAARFARADAAKRLLDAGADANSQDNTG 56
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory
subunit 10, gankyrin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 229
Score = 45.6 bits (106), Expect = 2e-07
Identities = 7/46 (15%), Positives = 12/46 (26%), Gaps = 1/46 (2%)
Query: 31 TALHCAAQYGHTPVVSQLLE-HSCDPTIRNSRHETALDLAAQYGRL 75
LH A V +LL ++ L + +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAH 47
Score = 39.0 bits (89), Expect = 6e-05
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLE-HSCDPTIRNSRHETALDLAAQ 71
K T L A GH L+E + + + +++ A D+A
Sbjct: 169 DKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 215
Score = 37.5 bits (85), Expect = 2e-04
Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 6/54 (11%)
Query: 64 TALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFY 117
L A V L+ + P L+ + + PLH +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGR------IPLHWSVSFQAHEI 49
Score = 31.3 bits (69), Expect = 0.026
Identities = 14/94 (14%), Positives = 27/94 (28%), Gaps = 7/94 (7%)
Query: 29 NETALHCAAQYGHTPVVSQLLEH-SCDPTIRNSRHETALDLAAQYGRLETVDTLVRTHPG 87
N+ LH AA G ++ L ++ + T L A G + LV +
Sbjct: 138 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA 197
Query: 88 LIQAYNARAQSTLFPASPLHLASRNGHRFYLQQK 121
+ + +A + +
Sbjct: 198 EYDLVDNKGAK------AEDVALNEQVKKFFLNN 225
Score = 27.5 bits (59), Expect = 0.51
Identities = 6/37 (16%), Positives = 13/37 (35%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 62
+D LH + + + S LL + + +
Sbjct: 31 DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD 67
Score = 24.4 bits (51), Expect = 5.3
Identities = 5/31 (16%), Positives = 8/31 (25%), Gaps = 3/31 (9%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEHSCD 54
++ A A V L + D
Sbjct: 201 LVDNKGAKAEDVALNEQ---VKKFFLNNVVD 228
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 45.7 bits (106), Expect = 3e-07
Identities = 12/56 (21%), Positives = 19/56 (33%)
Query: 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83
+ TALH A + +VS LL+ D + + L L +
Sbjct: 144 NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 199
Score = 41.0 bits (94), Expect = 1e-05
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Query: 28 DNETALHCAAQYGHTP----VVSQLLEHSCDPTIRNSRHETALDLAAQY 72
D ++ LH A + V+ Q+ +N+ +T L LA
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT 49
Score = 36.4 bits (82), Expect = 4e-04
Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEHSCDP--TIRNSRHETALD 67
+T + T + QL + + + + S E + D
Sbjct: 173 RVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 218
Score = 27.2 bits (58), Expect = 0.72
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 63 ETALDLAAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKV 122
++ L LA + ++R G + N + +PLHLA + +
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN---LQQTPLHLAVITNQPEIAEALL 59
Query: 123 QSDFC 127
+
Sbjct: 60 GAGCD 64
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 44.6 bits (104), Expect = 6e-07
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82
+ T LH A L+ I N +T L +A G + +V
Sbjct: 166 DTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
Score = 42.6 bits (99), Expect = 3e-06
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLVR 83
+ ++ T LH AA + LLE +P ++ TA+ AA G L+ + L+
Sbjct: 98 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLY 157
Query: 84 THP 86
Sbjct: 158 YKA 160
Score = 34.6 bits (78), Expect = 0.002
Identities = 8/46 (17%), Positives = 14/46 (30%), Gaps = 1/46 (2%)
Query: 29 NETALHCAAQYGHTPVVSQLL-EHSCDPTIRNSRHETALDLAAQYG 73
+ + A G + + + T + TAL A G
Sbjct: 3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAG 48
Score = 30.7 bits (68), Expect = 0.042
Identities = 18/90 (20%), Positives = 22/90 (24%), Gaps = 33/90 (36%)
Query: 27 KDNETALHCAAQYG---------------------------------HTPVVSQLLEHSC 53
+D+ TALH A G +V LL
Sbjct: 35 QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 94
Query: 54 DPTIRNSRHETALDLAAQYGRLETVDTLVR 83
N T L AA R E L+
Sbjct: 95 QVNAVNQNGCTPLHYAASKNRHEIAVMLLE 124
Score = 29.9 bits (66), Expect = 0.066
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLE 50
K+ +T L A G ++ +++E
Sbjct: 199 NKEEKTPLQVAK-GGLGLILKRMVE 222
Score = 29.6 bits (65), Expect = 0.10
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 69 AAQYGRLETVDTLVRTHPGLIQAYNARAQSTLFPASPLHLASRNGHRFYLQQKVQSDFC 127
A G+LE + + L + ++ + LH A GH ++ +Q
Sbjct: 10 LAYSGKLEELKESILADKSLATRTDQDSR------TALHWACSAGHTEIVEFLLQLGVP 62
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 41.4 bits (95), Expect = 6e-06
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 33 LHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTL 81
LH A ++ H VV L+++ D ++ +TA D++ G + + L
Sbjct: 104 LHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 34.8 bits (78), Expect = 0.001
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRN 59
D L AA+ G V L+ + T
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDW 32
Score = 32.5 bits (72), Expect = 0.007
Identities = 5/25 (20%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLE 50
+K +TA + G+ + ++L+
Sbjct: 130 SKFCKTAFDISIDNGNEDLA-EILQ 153
Score = 24.0 bits (50), Expect = 6.2
Identities = 2/11 (18%), Positives = 6/11 (54%)
Query: 104 SPLHLASRNGH 114
+ ++ NG+
Sbjct: 135 TAFDISIDNGN 145
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 40.3 bits (92), Expect = 2e-05
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 31 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 62
L AA G ++ LL+++ + +N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFG 34
Score = 37.9 bits (86), Expect = 9e-05
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEH 51
+TA A YG VVS + +
Sbjct: 130 NHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 33.7 bits (75), Expect = 0.003
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 51 HSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82
+ + RN + +TA DLA YGR E V +
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153
Score = 25.2 bits (53), Expect = 2.8
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 64 TALDLAAQYGRLETVDTLVR 83
L AA G LE + +L++
Sbjct: 3 NELASAAARGDLEQLTSLLQ 22
Score = 24.1 bits (50), Expect = 6.8
Identities = 3/11 (27%), Positives = 4/11 (36%)
Query: 104 SPLHLASRNGH 114
+ LA G
Sbjct: 135 TACDLARLYGR 145
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 36.7 bits (83), Expect = 2e-04
Identities = 8/26 (30%), Positives = 9/26 (34%)
Query: 26 TKDNETALHCAAQYGHTPVVSQLLEH 51
T L A Q G +V L H
Sbjct: 130 DARGLTPLELALQRGAQDLVDILQGH 155
Score = 35.6 bits (80), Expect = 6e-04
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 28 DNETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRHETALDLAAQYGRLETVDTLV 82
+H A Q GHT VVS L D R++R T L+LA Q G + VD L
Sbjct: 100 TGALPIHLAVQEGHTAVVSFL-AAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 32.9 bits (73), Expect = 0.005
Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 31 TALHCAAQYGHTPVVSQLLE-HSCDPTIRNSRHET 64
L AA G V +LL P N +T
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 32.6 bits (73), Expect = 0.006
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 24 MLTKDNETALHCAAQYGHTPVVSQLLEH 51
+ + ET L A + H L +
Sbjct: 109 IANESGETPLDIAKRLKHEHCEELLTQA 136
Score = 30.3 bits (67), Expect = 0.045
Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 36/93 (38%)
Query: 27 KDNETALHCAAQ---YGHTPVVSQLLEHSCDP---------------------------- 55
+ +ETALH A + +V L+++S +
Sbjct: 43 EPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 102
Query: 56 -----TIRNSRHETALDLAAQYGRLETVDTLVR 83
I N ET LD+A + + L +
Sbjct: 103 GKASIEIANESGETPLDIAKRLKHEHCEELLTQ 135
Score = 29.9 bits (66), Expect = 0.060
Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 38/125 (30%)
Query: 28 DNETALHC---AAQYGHTPVVSQLLEHSCDPTIR------NSRHETALDLAAQ---YGRL 75
D LH A + + Q D T + + ETAL LA + L
Sbjct: 2 DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61
Query: 76 ETVDTLVRTHPGLIQAYNARAQSTLFPA--------------------------SPLHLA 109
VD LV+ L + + + + +PL +A
Sbjct: 62 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121
Query: 110 SRNGH 114
R H
Sbjct: 122 KRLKH 126
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 32.2 bits (71), Expect = 0.008
Identities = 11/34 (32%), Positives = 13/34 (38%)
Query: 29 NETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 62
+ L AA G V LLE +P NS
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYG 36
Score = 31.1 bits (68), Expect = 0.022
Identities = 5/26 (19%), Positives = 8/26 (30%)
Query: 27 KDNETALHCAAQYGHTPVVSQLLEHS 52
+ A + GH V L +
Sbjct: 100 AWGRLPVDLAEELGHRDVARYLRAAA 125
Score = 29.2 bits (63), Expect = 0.099
Identities = 6/31 (19%), Positives = 12/31 (38%)
Query: 51 HSCDPTIRNSRHETALDLAAQYGRLETVDTL 81
+R++ +DLA + G + L
Sbjct: 91 AGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Score = 23.8 bits (49), Expect = 7.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 64 TALDLAAQYGRLETVDTLV 82
L AA GR+E V L+
Sbjct: 5 DWLATAAARGRVEEVRALL 23
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 31.2 bits (69), Expect = 0.017
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 31 TALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 62
L ++ G +V +++ DP++ N
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEG 34
Score = 26.9 bits (58), Expect = 0.59
Identities = 6/27 (22%), Positives = 9/27 (33%), Gaps = 2/27 (7%)
Query: 27 KDNETA--LHCAAQYGHTPVVSQLLEH 51
D +TA + G+T L
Sbjct: 99 SDMQTAADKCEEMEEGYTQCSQFLYGV 125
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 118
Score = 30.6 bits (67), Expect = 0.023
Identities = 4/33 (12%), Positives = 7/33 (21%)
Query: 30 ETALHCAAQYGHTPVVSQLLEHSCDPTIRNSRH 62
+ A + G V + D
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGG 35
Score = 23.7 bits (49), Expect = 6.2
Identities = 5/24 (20%), Positives = 8/24 (33%)
Query: 63 ETALDLAAQYGRLETVDTLVRTHP 86
+ A + G L+ V V
Sbjct: 3 DKEFMWALKNGDLDEVKDYVAKGE 26
>d2gu3a2 d.17.1.6 (A:34-98) Uncharacterized protein YpmB {Bacillus
subtilis [TaxId: 1423]}
Length = 65
Score = 27.8 bits (62), Expect = 0.11
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 58 RNSRHETALDLAAQYGRLETVDT 80
+ HE A A + L VD
Sbjct: 1 KEEGHEAAAAEAKKETDLAHVDQ 23
>d2cnqa1 d.143.1.1 (A:2-305) SAICAR synthase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 304
Score = 25.5 bits (55), Expect = 2.2
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 10 KSRDMETETEDELLMLTKDNETA 32
K RD+ LL + D +A
Sbjct: 18 KVRDIYEVDAGTLLFVATDRISA 40
>d1njha_ b.128.1.1 (A:) Hypothetical protein YojF {Bacillus subtilis
[TaxId: 1423]}
Length = 118
Score = 25.1 bits (55), Expect = 2.3
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 13 DMETETEDELLMLTKDNETALHCAAQYGHTP 43
+ + E+ LLM L + Q P
Sbjct: 85 EYTVDEENRLLMAGHLPGGKLAISLQISEKP 115
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296
{Legionella pneumophila [TaxId: 446]}
Length = 271
Score = 24.5 bits (53), Expect = 4.8
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 88 LIQAYNARAQSTLFPASPL--HLASRNGHRFYL 118
+I+ N + + +P SP R+ R YL
Sbjct: 77 VIKQINLNSTLSYYPGSPYFAINQLRSQDRLYL 109
>d1fiua_ c.52.1.10 (A:) Restriction endonuclease NgoIV {Neisseria
gonorrhoeae [TaxId: 485]}
Length = 286
Score = 23.8 bits (51), Expect = 8.1
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 60 SRHETALDLAAQYGRLETVDTLVRTHPGLIQA 91
SR+ + QY L + +P L A
Sbjct: 99 SRNRLEIARYQQYAHLTALAKAAEENPELAAA 130
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.128 0.369
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 448,479
Number of extensions: 16912
Number of successful extensions: 184
Number of sequences better than 10.0: 1
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 110
Length of query: 136
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 60
Effective length of database: 1,364,116
Effective search space: 81846960
Effective search space used: 81846960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.5 bits)