BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2197
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7Z063|WASH1_BOVIN WAS protein family homolog 1 OS=Bos taurus GN=WASH1 PE=2 SV=1
Length = 471
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LIQ DL+ + I Q+A++L L + ++F + + +R L AI +R S+ A I
Sbjct: 17 VPLIQPDLRREEAIQQVADALQYLQKVSGDIFSRISQRVELSRSQLQAIGERVSLAQAKI 76
Query: 108 EKLKNIQKSVTIVSKSKYPYPYN----GNYSVHIQHEHVT--PMYKCPLLLYDKTEINTR 161
EK+K +K++ + S +KYP P G+ + Q + P ++ + ++ R
Sbjct: 77 EKIKGSKKAIKVFSSAKYPAPERLQEYGSIFMGAQDPGLQRRPRHR---IQSKHRPLDER 133
Query: 162 DIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYIIVHP 221
+ KLKF+ V N E EE LG LP+ I SV S +LFNT++N+Y+KY+ + P
Sbjct: 134 ALQEKLKFFPVCVNTKPEPEDE--AEEGLGGLPSNISSVSSLLLFNTTENLYKKYVFLDP 191
Query: 222 GQVIARKPITKKH----DHTEQVKMEDAPKSL 249
+A +TK H TE+ K+ DAP S+
Sbjct: 192 ---LAGA-VTKTHVMLGAETEE-KLFDAPLSI 218
>sp|Q25532|VATG_MANSE V-type proton ATPase subunit G OS=Manduca sexta PE=3 SV=1
Length = 117
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 54/55 (98%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAK 375
GIQQLLAAEKRAAEKV+EA+KRKA+RLKQAKEEAQ+++EKYRQERE+ F+E+EAK
Sbjct: 7 GIQQLLAAEKRAAEKVSEARKRKAKRLKQAKEEAQDEVEKYRQERERQFKEFEAK 61
>sp|Q5ZKA6|WASH1_CHICK WAS protein family homolog 1 OS=Gallus gallus GN=WASH1 PE=2 SV=1
Length = 476
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 120/229 (52%), Gaps = 18/229 (7%)
Query: 36 VQSNMIKITNIEIALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHA 95
Q + ++ + LIQ DL+ + + Q+A++L L + ++F+ + + +R L A
Sbjct: 5 AQKHFLEGQTYSVPLIQPDLRREEAVQQVADALQYLQKVSGDIFNRISQRVETSRAQLQA 64
Query: 96 IEKRSSVVCANIEKLKNIQKSVTIVSKSKYPYP--YNGNYSVHIQHEHVT----PMYKCP 149
I +R ++ A IEK+K +K++ + S +KYP P S+ E + P +K
Sbjct: 65 ISERVTLAQAKIEKIKGSKKAIKVFSSAKYPAPERLQEYCSIFAGAEDPSKQKWPRHK-- 122
Query: 150 LLLYDKTEINTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTS 209
+ ++ + + KLK++ V N +H+ E EE LG LP I S+ S +LFNT+
Sbjct: 123 -IQSKHRMLDEKSLQEKLKYFPVCVNTKIHQ--EDDAEEGLGSLPRNISSLSSLLLFNTT 179
Query: 210 DNVYEKYIIVHPGQVIARKPITKKHDHTE---QVKMEDAPKSLISKGIL 255
+N+Y+KY+ + P +A +TK H E + K+ DAP S+ +G L
Sbjct: 180 ENLYKKYVFLDP---LAGA-VTKTHVALETETEEKLFDAPLSITERGQL 224
>sp|Q9XZH6|VATG_DROME V-type proton ATPase subunit G OS=Drosophila melanogaster GN=Vha13
PE=1 SV=1
Length = 117
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 53/55 (96%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAK 375
GIQQLLAAEK+AAEKVAEA+KRKARRLKQAK+EA E+IEK+RQERE+ F+E+EAK
Sbjct: 7 GIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAK 61
>sp|Q6VEQ5|WASH2_HUMAN WAS protein family homolog 2 OS=Homo sapiens GN=WASH2P PE=2 SV=2
Length = 465
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 111/215 (51%), Gaps = 26/215 (12%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LIQ DL+ + + Q+A++L L + ++F + + ++R + AI ++ S+ A I
Sbjct: 17 VPLIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRSQVQAIGEKVSLAQAKI 76
Query: 108 EKLKNIQKSVTIVSKSKYPYP---------YNGNYSVHIQHEHVTPMYKCPLLLYDKTEI 158
EK+K +K++ + S +KYP P + G +Q P ++ + +
Sbjct: 77 EKIKGSKKAIKVFSSAKYPAPERLQEYGSIFTGAQDPGLQRR---PRHR---IQSKHRPL 130
Query: 159 NTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYII 218
+ R + KLK + V + E EE LG LP+ I SV S +LFNT++N+Y+KY+
Sbjct: 131 DERALQEKLKDFPVCVST--KPEPEDDAEEGLGGLPSNISSVSSLLLFNTTENLYKKYVF 188
Query: 219 VHPGQVIARKPITKKH----DHTEQVKMEDAPKSL 249
+ P +A +TK H TE+ K+ DAP S+
Sbjct: 189 LDP---LAGA-VTKTHVMLGAETEE-KLFDAPLSI 218
>sp|Q8VDD8|WASH1_MOUSE WAS protein family homolog 1 OS=Mus musculus GN=Wash1 PE=2 SV=1
Length = 475
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LIQ DL+ + I Q+A++L L ++F + + +R+ L AI +R S+ A I
Sbjct: 17 VPLIQPDLRREEAIQQVADALQYLQNISGDIFSRISRRVELSRRQLQAISERVSLAQAKI 76
Query: 108 EKLKNIQKSVTIVSKSKYPYP---------YNGNYSVHIQHEHVTPMYKCPLLLYDKTEI 158
EK+K +K++ + S +KYP P + G +Q P Y+ + +
Sbjct: 77 EKIKGSKKAIKVFSSAKYPAPEHLQEYGSIFTGALDPGLQRR---PRYR---IQSKHRPL 130
Query: 159 NTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYII 218
+ R + KLK++ V N E EE LG LP+ I S+ S +LFNT++N+Y+KY+
Sbjct: 131 DERALQEKLKYFPVCVNTKSEPEDE--AEEGLGGLPSNISSISSLLLFNTTENLYKKYVF 188
Query: 219 VHPGQVIARKPITKKHD--HTEQVKMEDAPKSL 249
+ P +A +TK H TE+ K+ DAP S+
Sbjct: 189 LDP---LAGA-VTKTHTMLGTEEEKLFDAPLSI 217
>sp|A8K0Z3|WASH1_HUMAN WAS protein family homolog 1 OS=Homo sapiens GN=WASH1 PE=1 SV=2
Length = 465
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 26/215 (12%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ IQ DL+ + + Q+A++L L + ++F + + ++R + AI ++ S+ A I
Sbjct: 17 VPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRSQVQAIGEKVSLAQAKI 76
Query: 108 EKLKNIQKSVTIVSKSKYPYP---------YNGNYSVHIQHEHVTPMYKCPLLLYDKTEI 158
EK+K +K++ + S +KYP P + G +Q P ++ + +
Sbjct: 77 EKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRR---PRHR---IQSKHRPL 130
Query: 159 NTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYII 218
+ R + KLK + V + E EE LG LP+ I SV S +LFNT++N+Y+KY+
Sbjct: 131 DERALQEKLKDFPVCVST--KPEPEDDAEEGLGGLPSNISSVSSLLLFNTTENLYKKYVF 188
Query: 219 VHPGQVIARKPITKKH----DHTEQVKMEDAPKSL 249
+ P +A +TK H TE+ K+ DAP S+
Sbjct: 189 LDP---LAGA-VTKTHVMLGAETEE-KLFDAPLSI 218
>sp|B2RYF7|WASH1_RAT WAS protein family homolog 1 OS=Rattus norvegicus GN=Wash1 PE=2
SV=1
Length = 475
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 23/213 (10%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LIQ DL+ + I Q+A++L L ++F + + +R+ L AI +R S+ A I
Sbjct: 17 VPLIQPDLRREEAIQQVADALQYLQNISGDIFSRISQRVELSRRQLQAIGERVSLAQAKI 76
Query: 108 EKLKNIQKSVTIVSKSKYPYP---------YNGNYSVHIQHEHVTPMYKCPLLLYDKTEI 158
EK+K +K++ + S +KYP P + G +Q P Y+ + +
Sbjct: 77 EKIKGSKKAIKVFSSAKYPAPEHLQEYNSVFTGALDPGLQRR---PRYR---IQSKHRPL 130
Query: 159 NTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYII 218
+ R + KLK++ V + E EE LG LP+ I S+ S +LFNT++N+Y+KY+
Sbjct: 131 DERALQEKLKYFPVCVSTKSEPEDE--AEEGLGGLPSNISSISSLLLFNTTENLYKKYVF 188
Query: 219 VHPGQVIARKPITKKHD--HTEQVKMEDAPKSL 249
+ P +A +TK H TE+ K+ DAP S+
Sbjct: 189 LDP---LAGA-VTKTHTMLGTEEEKLFDAPLSI 217
>sp|Q28DN4|WASH1_XENTR WAS protein family homolog 1 OS=Xenopus tropicalis GN=wash1 PE=2
SV=1
Length = 472
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LI DL+ + I QI ++L L ++F + + R L I R S+ A I
Sbjct: 14 LPLILPDLRREEAIHQITDTLQHLQTVSNDIFSRILQRVETNRGQLQRINGRLSLAQAKI 73
Query: 108 EKLKNIQKSVTIVSKSKYPYPYNGNYSVHIQ-HEHVTPMYKCPLL---LYDKTEINTRDI 163
E+LK I+K++ + S +KYP P H+Q + V + L L K + R +
Sbjct: 74 ERLKGIKKAIKVFSSAKYPAPE------HLQEYSSVFAGAEDGWLAKKLRHKIQSKHRPL 127
Query: 164 D-----NKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYII 218
D KLK++ V N E EE LG LP I SV S +LFNT++N+Y+KY+
Sbjct: 128 DEQAVQEKLKYFPVCVNT--RGQDEESAEEGLGSLPRNISSVSSLLLFNTTENLYKKYVF 185
Query: 219 VHP--GQVIARKPITKKHDHTEQVKMEDAPKSL 249
+ P G V P + D K+ DAP S+
Sbjct: 186 LDPLAGVVTRTNPALEGEDEE---KLFDAPLSI 215
>sp|Q5U4A3|WASH1_XENLA WAS protein family homolog 1 OS=Xenopus laevis GN=wash1 PE=2 SV=1
Length = 472
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 28/219 (12%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LI DL+ + I QI ++L L ++F + + R L I R S+ A I
Sbjct: 14 LPLILPDLRREEAIHQITDTLQHLQTVSNDIFSRILQRVETNRDQLQRINGRLSLAQAKI 73
Query: 108 EKLKNIQKSVTIVSKSKYPYP---------YNG---NYSVHIQHEHVTPMYKCPLLLYDK 155
E+LK +K++ + S +KYP P + G +S Q + ++
Sbjct: 74 ERLKGSKKAIKVFSSAKYPAPDRLQEYSSIFAGAKDGWSAKKQRHKIQSKHRP------- 126
Query: 156 TEINTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEK 215
++ + + KLK++ V N E EE LG LP I+SV S +LFNT++N+Y+K
Sbjct: 127 --LDEQAVQEKLKYFPVCVNT--RGQDEESAEEGLGSLPRNINSVSSLLLFNTTENLYKK 182
Query: 216 YIIVHP--GQVIARKPITKKHDHTEQVKMEDAPKSLISK 252
Y+++ P G V P + D K+ DAP S+ +
Sbjct: 183 YVLLDPLAGVVTRTNPALEGEDEE---KLFDAPLSITKR 218
>sp|A4IG59|WASH1_DANRE WAS protein family homolog 1 OS=Danio rerio GN=Wash1 PE=2 SV=2
Length = 481
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LIQ DL+ + + QI ++L L+ ++F +S+ + R L ++ R + A +
Sbjct: 17 VPLIQPDLRREEAVHQITDALQYLEMISTDIFTRVSESVEKNRAHLQSVTDRIKLAQARV 76
Query: 108 EKLKNIQKSVTIVSKSKYPYPYNGNYSVHIQHEHVTPM-YKCPLLLYDKTEINTRDIDN- 165
+K+K +K+ + S +KYP P I V P K P + K + R +D+
Sbjct: 77 QKIKGSKKATKVFSSAKYPAPEKLQDYSSIFTGAVDPASQKRPRI---KVQSKLRPLDDK 133
Query: 166 ----KLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYIIVHP 221
KL + V N K E EE LG LP ++SV S +LFNT++N+Y+KY+ + P
Sbjct: 134 AQQEKLMYLPVCVNT--KKRSEDETEEGLGSLPRNVNSVSSLLLFNTTENLYKKYVFLDP 191
Query: 222 GQVIARKPITKKHDHTEQVKME---DAPKSL 249
+A +TK H E K + DAP S+
Sbjct: 192 ---LAGA-VTKTHTTLETEKEDKPFDAPLSI 218
>sp|C4AMC7|WASH3_HUMAN Putative WAS protein family homolog 3 OS=Homo sapiens GN=WASH3P
PE=2 SV=2
Length = 463
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 48 IALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCANI 107
+ LIQ DL+ + + Q+A++L L + ++F + + ++R + AI ++ S+ A I
Sbjct: 17 VPLIQPDLRREEAVQQMADALQYLQKVSGDIFSRISQQVEQSRSQVQAIGEKVSLAQAKI 76
Query: 108 EKLKNIQKSVTIVSKSKYPYP---------YNGNYSVHIQHEHVTPMYKCPLLLYDKTEI 158
EK+K +K++ + S +KYP P + G +Q P ++ + +
Sbjct: 77 EKIKGSKKAIKVFSSAKYPAPERLQEYGSIFTGAQDPGLQRR---PRHR---IQSKHRPL 130
Query: 159 NTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKYII 218
+ R + K V T + EE LG LP+ I SV S +LFNT++N+ +KY+
Sbjct: 131 DERALQEKDFPVCVSTKPEPEDD----AEEGLGGLPSNISSVSSLLLFNTTENLGKKYVF 186
Query: 219 VHPGQVIARKPITKKH----DHTEQVKMEDAPKSL 249
+ P +A +TK H TE+ K+ DAP S+
Sbjct: 187 LDP---LAGA-VTKTHVMLGAETEE-KLFDAPLSI 216
>sp|O75348|VATG1_HUMAN V-type proton ATPase subunit G 1 OS=Homo sapiens GN=ATP6V1G1 PE=1
SV=3
Length = 118
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 48/56 (85%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEA 374
S GIQQLL AEKRAAEKV+EA+KRK RRLKQAKEEAQ +IE+YR +REK F+ EA
Sbjct: 5 SQGIQQLLQAEKRAAEKVSEARKRKNRRLKQAKEEAQAEIEQYRLQREKEFKAKEA 60
>sp|Q9CR51|VATG1_MOUSE V-type proton ATPase subunit G 1 OS=Mus musculus GN=Atp6v1g1 PE=2
SV=3
Length = 118
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 48/56 (85%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEA 374
S GIQQLL AEKRAAEKV+EA+KRK RRLKQAKEEAQ +IE+YR +REK F+ EA
Sbjct: 5 SQGIQQLLQAEKRAAEKVSEARKRKNRRLKQAKEEAQAEIEQYRLQREKEFKAKEA 60
>sp|P79251|VATG1_BOVIN V-type proton ATPase subunit G 1 OS=Bos taurus GN=ATP6V1G1 PE=1
SV=3
Length = 118
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 48/56 (85%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEA 374
S GIQQLL AEKRAAEKV+EA+KRK RRLKQAKEEAQ ++E+YR +REK F+ EA
Sbjct: 5 SQGIQQLLQAEKRAAEKVSEARKRKNRRLKQAKEEAQAEVEQYRLQREKEFKAKEA 60
>sp|Q9TSV6|VATG2_PIG V-type proton ATPase subunit G 2 OS=Sus scrofa GN=ATP6V1G2 PE=3
SV=1
Length = 118
Score = 73.9 bits (180), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
S GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E+YR+ERE+ F+
Sbjct: 5 SQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREQEFQ 56
>sp|Q617N0|VATG_CAEBR Probable V-type proton ATPase subunit G OS=Caenorhabditis briggsae
GN=vha-10 PE=3 SV=1
Length = 126
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 47/53 (88%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYE 373
GIQQLLAAEKRAAEK+ EA+KRK +R KQAK+EAQ ++EKY+Q+RE+ F+ +E
Sbjct: 7 GIQQLLAAEKRAAEKINEARKRKLQRTKQAKQEAQAEVEKYKQQREQEFKGFE 59
>sp|Q5TM18|VATG2_MACMU V-type proton ATPase subunit G 2 OS=Macaca mulatta GN=ATP6V1G2 PE=3
SV=1
Length = 118
Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
S GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E+YR+ERE+ F+
Sbjct: 5 SQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREQEFQ 56
>sp|Q1XHY9|VATG2_PANTR V-type proton ATPase subunit G 2 OS=Pan troglodytes GN=ATP6V1G2
PE=3 SV=1
Length = 118
Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
S GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E+YR+ERE F+
Sbjct: 5 SQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQ 56
>sp|Q862Z6|VATG1_PANTR V-type proton ATPase subunit G 1 OS=Pan troglodytes GN=ATP6V1G1
PE=3 SV=3
Length = 118
Score = 73.2 bits (178), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
S GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E+YR+ERE F+
Sbjct: 5 SQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQ 56
>sp|O95670|VATG2_HUMAN V-type proton ATPase subunit G 2 OS=Homo sapiens GN=ATP6V1G2 PE=1
SV=1
Length = 118
Score = 72.8 bits (177), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
S GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E+YR+ERE F+
Sbjct: 5 SQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREHEFQ 56
>sp|P91303|VATG_CAEEL Probable V-type proton ATPase subunit G OS=Caenorhabditis elegans
GN=vha-10 PE=3 SV=1
Length = 126
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYE 373
GIQQLLAAEKRAAEK+ EA+KRK +R KQAK+EAQ ++EKY+Q+RE F+ +E
Sbjct: 7 GIQQLLAAEKRAAEKINEARKRKLQRTKQAKQEAQAEVEKYKQQREAEFKAFE 59
>sp|Q5WR09|VATG1_CANFA V-type proton ATPase subunit G 1 OS=Canis familiaris GN=ATP6V1G1
PE=3 SV=3
Length = 118
Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
S GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E YR+ERE+ F+
Sbjct: 5 SQGIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVELYRREREQEFQ 56
>sp|Q9WTT4|VATG2_MOUSE V-type proton ATPase subunit G 2 OS=Mus musculus GN=Atp6v1g2 PE=2
SV=1
Length = 118
Score = 72.8 bits (177), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 47/50 (94%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
GIQQLL AEKRAAEKVA+A+KRKARRLKQAKEEAQ ++E+YR+ERE+ F+
Sbjct: 7 GIQQLLQAEKRAAEKVADARKRKARRLKQAKEEAQMEVEQYRREREQEFQ 56
>sp|Q96LB4|VATG3_HUMAN V-type proton ATPase subunit G 3 OS=Homo sapiens GN=ATP6V1G3 PE=2
SV=1
Length = 118
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 46/58 (79%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAKV 376
S GI QLL AEKRA +K+ EAKKRK +RLKQAKEEA +I++YR +R+K FR ++K+
Sbjct: 5 SQGIHQLLQAEKRAKDKLEEAKKRKGKRLKQAKEEAMVEIDQYRMQRDKEFRLKQSKI 62
>sp|A4QNE9|VATG3_XENTR V-type proton ATPase subunit G 3 OS=Xenopus tropicalis GN=atp6v1g3
PE=3 SV=1
Length = 118
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAKV-- 376
S GIQQLL AEKRA +K+ EAKKRK +RL+QAKEEA DI++YR +RE FR + V
Sbjct: 5 SQGIQQLLQAEKRAKDKLEEAKKRKNKRLRQAKEEATADIDQYRLKREGDFRRIQTSVMG 64
Query: 377 SHCNIVLII 385
S N+ + I
Sbjct: 65 SQGNLAVKI 73
>sp|Q9NQA3|WASH6_HUMAN WAS protein family homolog 6 OS=Homo sapiens GN=WASH6P PE=1 SV=3
Length = 447
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 26/179 (14%)
Query: 84 KSIWRTRQCLHAIEKRSSVVCANIEKLKNIQKSVTIVSKSKYPYP---------YNGNYS 134
K + ++R + AI ++ S+ A IEK+K +K++ + S +KYP P + G
Sbjct: 35 KQVEQSRSQVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPERLQEYGSIFTGAQD 94
Query: 135 VHIQHEHVTPMYKCPLLLYDKTEINTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLP 194
+Q P ++ + ++ R + KLK + V + E EE LG LP
Sbjct: 95 PGLQRR---PRHR---IQSKHRPLDERALQEKLKDFPVCVST--KPEPEDDAEEGLGGLP 146
Query: 195 APIDSVMSSILFNTSDNVYEKYIIVHPGQVIARKPITKKH----DHTEQVKMEDAPKSL 249
+ I SV S +LFNT++N+Y+KY+ + P +A +TK H TE+ K+ DAP S+
Sbjct: 147 SNISSVSSLLLFNTTENLYKKYVFLDP---LAGA-VTKTHVMLGAETEE-KLFDAPLSI 200
>sp|Q5XGW0|VATG3_XENLA V-type proton ATPase subunit G 3 OS=Xenopus laevis GN=atp6v1g3 PE=3
SV=1
Length = 118
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAKV-- 376
S GIQQLL AEKRA +K+ EAKKRK +RL+QAKEEA DI++YR +RE FR + V
Sbjct: 5 SQGIQQLLQAEKRAKDKLEEAKKRKNKRLRQAKEEATADIDQYRLKREADFRRIQTSVMG 64
Query: 377 SHCNIVLII 385
S N+ + I
Sbjct: 65 SQGNLAVKI 73
>sp|A8MWX3|WASH4_HUMAN Putative WAS protein family homolog 4 OS=Homo sapiens GN=WASH4P
PE=5 SV=1
Length = 477
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 20/176 (11%)
Query: 84 KSIWRTRQCLHAIEKRSSVVCANIEKLKNIQKSVTIVSKSKYPYPYN----GNYSVHIQH 139
+ + ++R + AI ++ S+ A IEK+K +K++ + S +KYP P G+ Q
Sbjct: 66 QQVEQSRSQVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPERLQEYGSIFTDAQD 125
Query: 140 EHVT--PMYKCPLLLYDKTEINTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPI 197
+ P ++ + + ++ R + KLK + V + E EE LG LP+ I
Sbjct: 126 PGLQRRPRHR---IQSKQRPLDERALQEKLKDFPVCVST--KPEPEDDAEEGLGGLPSNI 180
Query: 198 DSVMSSILFNTSDNVYEKYIIVHPGQVIARKPITKKH----DHTEQVKMEDAPKSL 249
SV S +LFNT++N+Y+KY+ + P +A +TK H TE+ K+ DAP S+
Sbjct: 181 SSVSSLLLFNTTENLYKKYVFLDP---LAGA-VTKTHVMLGAETEE-KLFDAPLSI 231
>sp|Q8BMC1|VATG3_MOUSE V-type proton ATPase subunit G 3 OS=Mus musculus GN=Atp6v1g3 PE=2
SV=1
Length = 118
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 45/58 (77%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAKV 376
S GIQQLL AEKRA +K+ EAKKRK +RL+QAKEEA + ++YR + EK FR +AK+
Sbjct: 5 SQGIQQLLQAEKRAKDKLDEAKKRKGKRLRQAKEEAVAETDQYRMQMEKDFRLKQAKI 62
>sp|Q7JW27|WASH1_DROME WAS protein family homolog 1 OS=Drosophila melanogaster GN=wash
PE=1 SV=1
Length = 499
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 47 EIALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCAN 106
++A+I DL H DTIIQ A SLD L +++ ++F+ + R + I R A
Sbjct: 12 QVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDARLARNGSKVEDINNRVKRAQAK 71
Query: 107 IEKLKNIQKSVTIVSKSKYP-----YPYNGNY----SVHIQHEHVTPMYKCPLLLYDKTE 157
I+ L ++++ I + +++P P + + + + V + P Y
Sbjct: 72 IDALVGSKRAIQIFAPARFPASDVLAPLPATFPQVAANPLMEQQVD---QLPQGTYSSHS 128
Query: 158 INTRDIDNKLKFYHVKTNNMLHKNVELVCEE-------SLGKLPA-PIDSVMSSILFNTS 209
+ D+ F+HV+ + + LV E LG LPA + SV S + FNT+
Sbjct: 129 AADQKPDDADIFFHVRGDR--EQESPLVAERKITNRTAGLGILPAGGVRSVPSLMRFNTN 186
Query: 210 DNVY 213
+ Y
Sbjct: 187 EFAY 190
>sp|Q54CK9|WASH1_DICDI WAS protein family homolog DDB_G0292878 OS=Dictyostelium discoideum
GN=DDB_G0292878 PE=1 SV=1
Length = 472
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 47 EIALIQDDLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKRSSVVCAN 106
++ ++ + L+ ++I+QI +SL+ L++ +++ + + + + R +
Sbjct: 7 QVPVVSNGLRETESILQIVDSLEKLEKVFNDMYSTISARVSHEKSRIDNVANRLNNAQHK 66
Query: 107 IEKLKNIQKSVTIVSKSKYPYP---------YNGNYSVHIQHEHVTPMYKCPLLLYDKTE 157
+ ++ ++++T+ S +KYP Y+G + + + H + + + E
Sbjct: 67 VNQIVGSKQAITVFSSAKYPADKKWGDYVPIYSGKHKLPFKPSHYHGLNSEDSPIKKRPE 126
Query: 158 INTRDIDNKLKFYHVKTNNMLHKNVELVCEESLGKLPAPIDSVMSSILFNTSDNVYEKY 216
+ D+ N L F K+ + K VE+ +E LG++PA I SV + +LFNT +N Y+KY
Sbjct: 127 DSYLDV-NDLVFIE-KSIDTTSKEVEV--KEGLGRIPAQIPSVSNLLLFNTQENPYKKY 181
>sp|Q9SP55|VATG_CITLI V-type proton ATPase subunit G OS=Citrus limon GN=VATG PE=3 SV=1
Length = 110
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFR 370
GIQQLLAAE+ A VA A+ K RLKQAKEEA+ +I +YR + E+ F+
Sbjct: 9 GIQQLLAAEQEAQHIVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQ 58
>sp|Q54Z13|VATG_DICDI V-type proton ATPase subunit G OS=Dictyostelium discoideum
GN=atp6v1g PE=1 SV=2
Length = 107
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 47/55 (85%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAK 375
GI++LL AE+ A + VA+A++ + ++LK+A EEA+++I+++R++++K ++EYE+K
Sbjct: 6 GIKKLLDAERTAQKIVADARQDRVQKLKKAVEEAEKEIKEFREKKDKEYKEYESK 60
>sp|Q9SZH0|VATG3_ARATH V-type proton ATPase subunit G3 OS=Arabidopsis thaliana GN=VHA-G3
PE=3 SV=1
Length = 108
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAKVSHCN 380
GIQ LL AE+ A V+ A+ K R+KQAK+EA++++E+YR ++ EY+ +VS +
Sbjct: 9 GIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRS---RLEEEYQTQVSGTD 65
>sp|O82629|VATG2_ARATH V-type proton ATPase subunit G2 OS=Arabidopsis thaliana GN=VHA-G2
PE=3 SV=2
Length = 106
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIF-REYEA 374
S GIQQLLAAE+ A + V A+ K RLKQAKEEA+ ++ +++ E+ F R+ EA
Sbjct: 3 SAGIQQLLAAEREAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEA 59
>sp|P78713|VATG_NEUCR V-type proton ATPase subunit G OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-10 PE=3 SV=1
Length = 115
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 43/56 (76%)
Query: 319 SLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEA 374
S GIQ LL AE+ A + V +A++ + +R+++A++EA+++IE Y+ ++E F+++EA
Sbjct: 6 SAGIQLLLDAEREATKIVQKAREYRTKRVREARDEAKKEIEAYKAQKEAEFKKFEA 61
>sp|P48836|VATG_YEAST V-type proton ATPase subunit G OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA10 PE=1 SV=1
Length = 114
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAK 375
GI LL AEK A E V++A+K + +LKQAK +A ++I+ Y+ +++K +E+E K
Sbjct: 6 GIATLLQAEKEAHEIVSKARKYRQDKLKQAKTDAAKEIDSYKIQKDKELKEFEQK 60
>sp|O74174|VATG_SCHPO V-type proton ATPase subunit G OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma10 PE=3 SV=2
Length = 108
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 321 GIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKY 361
GIQQLL AEK A V +A++ + +RLK A+ EA+ +I++Y
Sbjct: 8 GIQQLLEAEKVARNIVEKARQHRTQRLKDARLEAKREIDEY 48
>sp|Q5TZA2|CROCC_HUMAN Rootletin OS=Homo sapiens GN=CROCC PE=1 SV=1
Length = 2017
Score = 33.9 bits (76), Expect = 2.1, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 38/60 (63%), Gaps = 7/60 (11%)
Query: 323 QQLLAAEKRA-------AEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAK 375
QQ++A +++A A+K+ +A++ L++ + +ED+++ ++E+E +RE EA+
Sbjct: 953 QQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAE 1012
>sp|P30427|PLEC_RAT Plectin OS=Rattus norvegicus GN=Plec PE=1 SV=2
Length = 4687
Score = 33.9 bits (76), Expect = 2.3, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 188 ESLGKLPAPIDSVMSSILFNTSDNVYEKYIIVHPGQVIARKPITKKHDHTEQVKMEDAPK 247
E LGKL A I++ +++ DN ++ + ++ + +QV E A
Sbjct: 2378 EELGKLKARIEAENRALILRDKDN--------------TQRFLEEEAEKMKQVAEEAARL 2423
Query: 248 SLISKGILRTDF---SKLAVVLKLGAKTNKSIIWCQNSMARIKSTAG-WNRTRSLALTRQ 303
S+ ++ R LA L K K + R+K+ A + + LA +
Sbjct: 2424 SVAAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQA 2483
Query: 304 TRYALPTKPTRPPVV--SLGIQQLLAAEK-RAAEKVAEAKKRKAR--RLKQAKEEAQEDI 358
R + +V + G Q+ L AE+ R E AEA++ K R + +A+ A+ED
Sbjct: 2484 RRLQADKEQMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDA 2543
Query: 359 EKYRQEREKI 368
+++R++ E+I
Sbjct: 2544 QRFRKQAEEI 2553
>sp|Q9QXS1|PLEC_MOUSE Plectin OS=Mus musculus GN=Plec PE=1 SV=2
Length = 4691
Score = 33.1 bits (74), Expect = 3.6, Method: Composition-based stats.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 23/190 (12%)
Query: 188 ESLGKLPAPIDSVMSSILFNTSDNVYEKYIIVHPGQVIARKPITKKHDHTEQVKMEDAPK 247
E LGKL A I++ +++ DN ++ + ++ + +QV E A
Sbjct: 2383 EELGKLKARIEAENRALILRDKDN--------------TQRFLEEEAEKMKQVAEEAARL 2428
Query: 248 SLISKGILRTDF---SKLAVVLKLGAKTNKSIIWCQNSMARIKSTAG-WNRTRSLALTRQ 303
S+ ++ R LA L K K + R+K+ A + + LA +
Sbjct: 2429 SVAAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQA 2488
Query: 304 TRYALPTKPTRPPVV--SLGIQQLLAAEK-RAAEKVAEAKKRKAR--RLKQAKEEAQEDI 358
R + +V + G Q+ L AE+ R E AEA++ K R + +A+ A+ED
Sbjct: 2489 RRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDA 2548
Query: 359 EKYRQEREKI 368
+++R++ E+I
Sbjct: 2549 QRFRKQAEEI 2558
>sp|Q8RMG1|PROD1_BACNA Proline dehydrogenase 1 OS=Bacillus subtilis subsp. natto GN=fadM
PE=1 SV=1
Length = 302
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 41 IKITNIEIALIQD-DLKHNDTIIQIANSLDILDESMRNVFDHTKKSIWRTRQCLHAIEKR 99
+K+T+I + L ++ L H I+ +A D+ + H ++++ RQC EK
Sbjct: 94 LKLTSIGLDLSEELALTHLRAILSVAKQYDVAVTIDMEDYSHYEQTLSIYRQCKQEFEKL 153
Query: 100 SSVVCA-------NIEKLKNIQKSVTIVSKSKY------PYPYNGNYSVHIQHEHVTPMY 146
+V+ A +I+K+++++ ++ +V K Y +P +H Q +
Sbjct: 154 GTVIQAYLYRAAEDIKKMRDLKPNLRLV-KGAYKESAAVAFPDKRGTDLHFQ-----SLI 207
Query: 147 KCPLLLYDKTEINTRDIDNKLKF 169
K LL + T + T D D+ +KF
Sbjct: 208 KLQLLSGNYTAVATHD-DDIIKF 229
>sp|Q12649|HMDH_PHYB8 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Phycomyces
blakesleeanus (strain ATCC 8743b / FGSC 10004 / NBRC
33097 / NRRL 1555) GN=hmgA PE=3 SV=2
Length = 1176
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 79 FDHTKKSIWRTRQCLHAIEKRSSVVCANIEKLKNI----QKSVTIVSKSKYPYPYN--GN 132
F H+ IW+ L A + S + AN++ KN+ Q + T S Y +N G+
Sbjct: 183 FAHSPADIWQDEATLLADKNIRSTIEANLDTAKNVFGDLQLNATYASSVTLSYAFNTTGD 242
Query: 133 YSVHIQHEHVTPMYKCPLLLYDKTEI----NTRDIDNKLKFYHVKTNNMLHKNVELV 185
Y EH+ M+K + ++ N +N + + T N++ + EL+
Sbjct: 243 Y-----REHLADMWKHKVATLPPADLVSLSNIGQQENVFAWLFIVTRNVIFRVKELI 294
>sp|Q03R31|RNY1_LACBA Ribonuclease Y 1 OS=Lactobacillus brevis (strain ATCC 367 / JCM
1170) GN=rny1 PE=3 SV=1
Length = 519
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 323 QQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQEREKIFREYEAKV 376
++L AA+ AA +AEAKK+ K+A EA+ED KYR E E +E A+V
Sbjct: 30 RKLDAAKYTAAGVLAEAKKQAETATKEALLEAKEDSHKYRAEVETELKERRAEV 83
>sp|Q2JV13|SYL_SYNJA Leucine--tRNA ligase OS=Synechococcus sp. (strain JA-3-3Ab) GN=leuS
PE=3 SV=1
Length = 873
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 248 SLISKGILRTDFSKL-AVVLKLGAKTNKSIIWCQNSMARIKSTAGWNRTRSLALTRQTRY 306
+L+ K +L+ F K+ A +L A K W + + ++ G + + +T
Sbjct: 183 ALVEKRLLKQWFLKITAYADQLLADLEKLSGWPERVLTMQENWIGQSVGARVVFKTETGE 242
Query: 307 ALPTKPTRPPVVSLGIQQLLAAEKRAAEKVAEAKKRKARRLKQAKEEAQEDIEKYRQERE 366
LP TRP + +LA E EK+ ++ A + +A+ A+ +IE+ ++RE
Sbjct: 243 ELPVFTTRPDTLWGATFMVLAPEHPLVEKLTTPEQEVAVKAYRAEAAARSEIERSAEDRE 302
Query: 367 K 367
K
Sbjct: 303 K 303
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,549,367
Number of Sequences: 539616
Number of extensions: 5195193
Number of successful extensions: 32027
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 30858
Number of HSP's gapped (non-prelim): 1248
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)