BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2198
(279 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328724498|ref|XP_001942729.2| PREDICTED: DNA repair protein XRCC3-like [Acyrthosiphon pisum]
Length = 330
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 119/202 (58%), Gaps = 21/202 (10%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYI 97
+++TG ++ D +L GG+ GITE+SG SGCGKTQ CLQ+ L++Q+ KG YI
Sbjct: 87 ILTTGCKQIDKLLGGGLFKYGITEISGESGCGKTQFCLQIALTVQLPLSLKGAKSGAAYI 146
Query: 98 CTESVFPTARLAQLC-------------ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQ 144
CTE FP++R+ Q+ +++ L + D I I+H DLK+ +
Sbjct: 147 CTEDRFPSSRIQQMISNIRFKYQCDSKIDMNELCQTDYGDNILISHIATVEDLKKCIHEM 206
Query: 145 --SGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
+ + +IVIDSI +FR Y + +R+ D+RD+A +LH+LS++H + +IC N
Sbjct: 207 LPRVLLHRPIKLIVIDSITAVFRGEYTPSEVPRRSRDLRDIAVFLHKLSVEHGLWIICVN 266
Query: 203 QVTSAMTH--SDKNIPALGLTY 222
QVTS+++ +K +P+LGL +
Sbjct: 267 QVTSSISDIGGNKLVPSLGLAW 288
>gi|307191609|gb|EFN75106.1| DNA-repair protein XRCC3 [Harpegnathos saltator]
Length = 244
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 124/225 (55%), Gaps = 15/225 (6%)
Query: 36 IDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----H 91
I E ++TG K D+ILK GI GIT+ GA+G GKTQL LQ+CL++Q+
Sbjct: 4 IGERERFLTTGCSKLDTILKDGISCRGITQFYGAAGTGKTQLALQLCLTVQLPTTAGGLQ 63
Query: 92 KGVLYICTESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTLESQSGFIE 149
G +YICTE++FP+ RL QL E S +AK D IF+ H +L+ L + +
Sbjct: 64 AGAIYICTEALFPSKRLQQLIENSEIAKIHSVNGDVIFVDHASTMDELEYCLHHKVPALM 123
Query: 150 N--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
N K+G+++IDSIA +R ED R +R + LHEL + VIC NQV++
Sbjct: 124 NAHKIGLLIIDSIAAPYRVEDWEDP--SRGKSLRKIGRQLHELCKNGDLCVICINQVSAI 181
Query: 208 MTH---SDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICT 249
+ + SD PALGLT+ + H+ + S+++ +++ +
Sbjct: 182 IDNNIISDNEQPALGLTWSSM--ITSSIHFYRKASVRYACIMLAS 224
>gi|115754819|ref|XP_790563.2| PREDICTED: DNA repair protein XRCC3-like [Strongylocentrotus
purpuratus]
Length = 355
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 122/225 (54%), Gaps = 18/225 (8%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
EV K+K++ F+ ++TG D L GGI GITE++G S GKT
Sbjct: 54 EVYKIKNITALTLFKQSHQEDRKEPTHLTTGCPILDEFLHGGILVKGITEIAGQSAAGKT 113
Query: 76 QLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQL-----CELSP-LAKP-KCSD 124
QLCLQ+CL+ Q+ GV+YICTE VFP+ RL QL ++ P LAK D
Sbjct: 114 QLCLQLCLTAQLPVQQGGLSNGVVYICTEDVFPSKRLQQLISSFNSKIGPALAKQLAVGD 173
Query: 125 KIFITHCYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRD 182
I++ H E L LE + + ++ V + V+DS+A IFR+ + ++RA +++
Sbjct: 174 HIYVEHAAEKDQLWHCLEKRLPLLLSRGMVKLAVVDSLAAIFRSEFELRDTIRRARELQR 233
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHS-----DKNIPALGLTY 222
+ +LH LS + + V+C NQVT+ M S + +PALGLT+
Sbjct: 234 VGAHLHRLSSQFNVAVVCVNQVTANMKASLDPTESEMMPALGLTW 278
>gi|390355303|ref|XP_003728518.1| PREDICTED: DNA repair protein XRCC3-like [Strongylocentrotus
purpuratus]
Length = 355
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 121/225 (53%), Gaps = 18/225 (8%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
EV K+K++ F+ ++TG D L GGI GITE++G S GKT
Sbjct: 54 EVYKIKNITALTLFKQSHQEDRKEPTHLTTGCPILDEFLHGGILVKGITEIAGQSAAGKT 113
Query: 76 QLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLC-----ELSP-LAKP-KCSD 124
QLCLQ+CL+ Q+ GV+YICTE VFP+ RL QL + P LAK D
Sbjct: 114 QLCLQLCLTAQLPVQQGGLANGVVYICTEDVFPSKRLQQLISSFNRRIGPALAKQLAVGD 173
Query: 125 KIFITHCYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRD 182
I++ H E L LE + + ++ V + V+DS+A IFR+ + ++RA +++
Sbjct: 174 HIYVEHAAEKDQLWHCLEKRLPLLLSRGMVKLAVVDSLAAIFRSEFELRDTIRRARELQR 233
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHS-----DKNIPALGLTY 222
+ +LH LS + + V+C NQVT+ M S + +PALGLT+
Sbjct: 234 VGAHLHRLSSQFNVAVVCVNQVTANMEASLDPTESEMMPALGLTW 278
>gi|345491182|ref|XP_003426545.1| PREDICTED: DNA repair protein XRCC3 [Nasonia vitripennis]
Length = 252
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 113/203 (55%), Gaps = 25/203 (12%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK---GVLY 96
E+ +STG K DS L+GG+ GIT++ G SG GKTQL LQ CLS Q+ + GV Y
Sbjct: 9 EMFLSTGCSKLDSFLRGGLPRKGITQIYGESGTGKTQLALQFCLSAQIPKNSTDVGGVAY 68
Query: 97 ICTESVFPTARLAQLCELSPLAKPKC--SDKIFITH---------CYEFIDLKRTLESQS 145
ICTE+ FP++RL +L + SPL K ++KIFI H C D TL S
Sbjct: 69 ICTEAAFPSSRLHELFKKSPLVKDYAISNEKIFIEHISNTEGLEDCIFQPDRLPTLLSM- 127
Query: 146 GFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+K+ +++IDSIA +R Y RA +R + + L +LS H + V+C NQVT
Sbjct: 128 ----HKIKLLIIDSIAATYRVEYDLMNVKSRAKSLRKVGYQLQKLSKIHEMAVVCINQVT 183
Query: 206 SAMTH------SDKNIPALGLTY 222
+ M + S K P+LG+T+
Sbjct: 184 AMMGNNYTENLSCKEQPSLGITW 206
>gi|61806653|ref|NP_001013559.1| DNA repair protein XRCC3 [Danio rerio]
gi|60552509|gb|AAH90820.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Danio rerio]
gi|182888930|gb|AAI64394.1| Xrcc3 protein [Danio rerio]
Length = 352
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 29/232 (12%)
Query: 20 VKDLKKKKAFQV--GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQL 77
V+ K A Q+ G+ P+ +S D +++GG+ GITEL+G S GKTQ
Sbjct: 57 VRKSKPVTALQLIQGECPVLEPGHRLSFACPVLDGLMRGGLPLRGITELAGESAAGKTQF 116
Query: 78 CLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCELSPLAKP----------KCS 123
CLQ+CLS+Q Q H G +YICTE FP RL QL P +P + S
Sbjct: 117 CLQLCLSVQYPQEHGGLNSGAVYICTEDSFPIKRLRQLITQQPRLRPDLPPALIHSLRFS 176
Query: 124 DKIFITHCYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMR 181
D I+I H + L+ + + + + V ++V+DS+A +FR+ + D+ VQR+ +
Sbjct: 177 DNIYIEHAADLEALQVCVSQRVPVLLKRGLVRLLVVDSVAALFRSEFQADEAVQRSRHLL 236
Query: 182 DLAHYLHELSIKHRIVVICTNQVTSAMTHSD-----------KNIPALGLTY 222
+ LH LS + V+C NQVT + + K +PALG+ +
Sbjct: 237 AFSSTLHRLSHTYAAPVLCVNQVTDVVDGPNPGRCDYGLVGSKVLPALGIAW 288
>gi|332376244|gb|AEE63262.1| unknown [Dendroctonus ponderosae]
Length = 257
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 120/241 (49%), Gaps = 24/241 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+S G D +L GGI GI EL G SG GKTQLCLQ+ L +Q+ G V+YIC
Sbjct: 25 ISIGCTNLDGLLNGGIPVNGINELYGCSGVGKTQLCLQLALQIQLPVHLGGKGQEVVYIC 84
Query: 99 TESVFPTARLAQL-CEL-SPLAKPKC-SDKIFITHCYEFIDLKRTLESQSGF-IENKVGM 154
TE VFP+ RL QL C S C D+I+I H F+ L++ L F + KVG+
Sbjct: 85 TEDVFPSKRLIQLACAFRSKYNVDICFEDRIYIEHIPNFVRLQKCLNLLPQFLLGKKVGL 144
Query: 155 IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKN 214
I+IDSIAG+FR+ YV R+ + L L EL K + ++ NQV ++ S
Sbjct: 145 IIIDSIAGLFRSDTENPNYVARSQEFTVLGKVLIELQEKCKFGILTINQVVDNLS-SGLT 203
Query: 215 IPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNIPALGLSWSNLI 274
P+LGL++ R + I+ + V+ P L S+SNL+
Sbjct: 204 EPSLGLSWANNVTSRFGLSRNNTDPIRRFDVIFS---------------PDLAPSFSNLL 248
Query: 275 I 275
I
Sbjct: 249 I 249
>gi|291225163|ref|XP_002732570.1| PREDICTED: X-ray repair complementing defective repair in Chinese
hamster cells 3-like [Saccoglossus kowalevskii]
Length = 383
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 18/198 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYIC 98
V TG E D L+GGI + GITE++G S GKTQLC+Q+CL++Q+ G +YIC
Sbjct: 81 VKTGCEVLDDFLRGGILSQGITEIAGESAAGKTQLCMQLCLTVQLPCHMGGLAGGAVYIC 140
Query: 99 TESVFPTARLAQLC-----ELSPLAKPKCS--DKIFITHCYEFIDLKRTLESQSGFI--E 149
TE VFP+ RL Q+ +L P + + + D IF+ H + L + + + +
Sbjct: 141 TEDVFPSKRLHQMIKYFNRKLGPELEMQLAVGDHIFVEHASDQESLWKCINQRVPVLLAR 200
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
V IVIDSIA +FR Y + +RAH +R L +L+ ++ V+C NQV++ M
Sbjct: 201 GMVKFIVIDSIAALFRGEYDFSEAAKRAHHLRSFGDQLRKLNQQYNAPVVCVNQVSANMK 260
Query: 210 HSDKN-----IPALGLTY 222
+ IPALGL++
Sbjct: 261 GDSEYGRYEFIPALGLSW 278
>gi|383863171|ref|XP_003707056.1| PREDICTED: DNA repair protein XRCC3-like [Megachile rotundata]
Length = 257
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
++TG K D++L+GGI GIT++ GA+ GKTQL LQ+CL++Q+ + G +YIC
Sbjct: 21 LTTGCSKLDALLEGGITTRGITQIYGAASTGKTQLALQLCLTVQLPEVKGGFAAGAVYIC 80
Query: 99 TESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
TES+FP+ RL +L + K D +F+ H +L+ L + + K+G+
Sbjct: 81 TESIFPSRRLQELIQKLDATKKYGINGDLVFVEHVSTTDELETCLLHRIPILMSAKKIGL 140
Query: 155 IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS--D 212
I+IDSIA +R ++ R +R + LHELS KH I +IC NQVT+ + ++ D
Sbjct: 141 IIIDSIAAPYRVEDWNSEFNNRPKSLRTIGQQLHELS-KHNICIICINQVTAVIHNNLLD 199
Query: 213 KNI---PALGLTY 222
N+ PALG T+
Sbjct: 200 DNVSERPALGTTW 212
>gi|241690305|ref|XP_002411756.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
gi|215504591|gb|EEC14085.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
Length = 354
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 108/201 (53%), Gaps = 16/201 (7%)
Query: 36 IDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-- 93
+D + +S G D L GG+ G+TELSG SG GKTQ CLQ+ L Q S
Sbjct: 81 LDSGQSTLSFGCPILDRFLGGGLPTRGVTELSGESGSGKTQFCLQLSLMAQRSLGDGMPI 140
Query: 94 -VLYICTESVFPTARLAQLC-ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN- 150
V+YICTE FP RL Q+ EL P + SD + ++H E L LE+ +
Sbjct: 141 YVVYICTEDRFPDRRLRQMQRELGPAGR-SLSDNVLVSHVGELAMLMTCLETTLPSLRRT 199
Query: 151 -KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+VG++V+DS+A +FR+ Y +D+ +QRA D+R L L + + + V+C NQVT ++
Sbjct: 200 KRVGLLVLDSVAALFRSEYEQDQGIQRAADLRKLGTVLDRI-WRSGVAVLCVNQVTDLIS 258
Query: 210 H--------SDKNIPALGLTY 222
+P+LGLT+
Sbjct: 259 SDHPMFPVTGASCVPSLGLTW 279
>gi|47213355|emb|CAF92978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 267
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 102/192 (53%), Gaps = 16/192 (8%)
Query: 29 FQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
+G+ P + + +S G D +L+GG+ AGGITELSG S GKTQL LQ+CL +Q
Sbjct: 63 LHLGECPRLESGLRLSVGCAVLDELLRGGLPAGGITELSGQSSAGKTQLALQLCLCVQYP 122
Query: 89 QPH----KGVLYICTESVFPTARLAQLCE----LSPLAKP------KCSDKIFITHCYEF 134
+ G +YICTE+ FP RL QL L P P K SD++++ H +
Sbjct: 123 TQYGGLDSGAVYICTENCFPIRRLQQLISDQHALRPDVPPSLISTLKFSDRVYVEHAADL 182
Query: 135 IDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSI 192
L+R L + + + V ++V+DS+A +FR + ++ +R M ++ LH LS
Sbjct: 183 DSLQRCLSRRVPLLLARGLVRLLVLDSVAAVFRGEFQAAEWQERTRQMLSVSSTLHRLSW 242
Query: 193 KHRIVVICTNQV 204
V+C NQV
Sbjct: 243 DFATPVLCINQV 254
>gi|405972678|gb|EKC37434.1| DNA repair protein XRCC3 [Crassostrea gigas]
Length = 309
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 14/183 (7%)
Query: 53 ILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YICTESVFPTAR 107
+L GGI + GITE+SG S GKTQ CLQ+CL++Q+ P +G L YICTE FP+ R
Sbjct: 63 LLTGGILSQGITEISGESASGKTQFCLQLCLTVQLP-PEEGGLAAGAAYICTEDAFPSKR 121
Query: 108 LAQLCELSPLAKPK-----CSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSI 160
L+Q+ K D IFI H + L + + + V ++++DS+
Sbjct: 122 LSQMISYFRQRSEKRKQIPFGDNIFIEHVADLDSLNSCIHQKLPHLLSSGSVKLVIVDSV 181
Query: 161 AGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH-SDKNIPALG 219
A +FR Y +R+ M LA LH +S K+ + ++C NQVT +M KNIPALG
Sbjct: 182 AAVFRCDYELKDMYKRSKHMASLAASLHRISSKYCLPIVCVNQVTDSMQSIGKKNIPALG 241
Query: 220 LTY 222
L +
Sbjct: 242 LAW 244
>gi|307171500|gb|EFN63341.1| DNA-repair protein XRCC3 [Camponotus floridanus]
Length = 253
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 111/199 (55%), Gaps = 16/199 (8%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV--- 94
+ E ++TG K D ILKGGI GIT++ GA+G GKTQL LQ+CLS+Q+ G+
Sbjct: 12 IKEKFLTTGCSKLDIILKGGIPCRGITQIYGAAGTGKTQLALQLCLSVQLPVTAGGLGAG 71
Query: 95 -LYICTESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTLESQSGFIEN- 150
+YI TE+ FP+ RL QL + S +AK D IF+ H +L+ L+ + + N
Sbjct: 72 AIYISTETAFPSERLQQLLQSSEIAKAHSVNGDVIFVNHIATIDELELCLQRKVPALMNI 131
Query: 151 -KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT---- 205
K+G++VIDSIA +R +D+ + R++ LHEL + + VIC NQV+
Sbjct: 132 HKIGLLVIDSIAAPYRVEDWKDQL--QGKSKRNVGRQLHELCKNNNLCVICINQVSAVID 189
Query: 206 --SAMTHSDKNIPALGLTY 222
S ++ P LG T+
Sbjct: 190 SHSVISEDAIEQPVLGFTW 208
>gi|109084988|ref|XP_001083970.1| PREDICTED: DNA repair protein XRCC3 isoform 2 [Macaca mulatta]
Length = 346
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G DS+L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDSLLRGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEAGAIYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDALLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLAERLRE 303
>gi|355693597|gb|EHH28200.1| hypothetical protein EGK_18581 [Macaca mulatta]
gi|387540488|gb|AFJ70871.1| DNA repair protein XRCC3 [Macaca mulatta]
Length = 346
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G DS+L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDSLLRGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDALLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLAERLRE 303
>gi|355767815|gb|EHH62665.1| hypothetical protein EGM_21063 [Macaca fascicularis]
Length = 346
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G DS+L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDSLLRGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEAXAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDALLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLAERLRE 303
>gi|449280658|gb|EMC87894.1| DNA repair protein XRCC3 [Columba livia]
Length = 347
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
+S G D++LKGGI GITEL+G S GKTQ+ LQ+CL +Q P+K G +Y
Sbjct: 82 LSLGCSVLDALLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQY--PYKYGGLESGAVY 139
Query: 97 ICTESVFPTARLAQLCE----------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG 146
ICTE VFP+ RL QL + + K K + IF+ H + + ++
Sbjct: 140 ICTEDVFPSKRLQQLIDQQHKLRADVPAEIIQKIKFGNGIFVEHAADLETFHNCITNRIS 199
Query: 147 FI--ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+ V ++VIDSIA +FR + V +A ++ LH LS++ R ++C NQV
Sbjct: 200 LLLARGMVRLVVIDSIAALFRCEFGASDSVTKARYLQTFGAQLHSLSMRFRTPIMCINQV 259
Query: 205 TSAMTHSD-----------KNIPALGLTYERAHDMRDLAHYL 235
T A++ S+ + PALG+T+ MR + + L
Sbjct: 260 TDAVSESEAAQCGCSAVDNRVSPALGITWANQLLMRLMVNRL 301
>gi|380027258|ref|XP_003697346.1| PREDICTED: DNA repair protein XRCC3-like [Apis florea]
Length = 254
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 14/196 (7%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----L 95
E ++TG KFD++L+GGI GIT++ GA+ GKTQL LQ+CL++Q+ + G+ +
Sbjct: 15 EQFLTTGCLKFDTLLQGGITNRGITQIYGAASTGKTQLALQLCLTVQLPKTDGGLAAGAI 74
Query: 96 YICTESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTL--ESQSGFIENK 151
YICTES+FP+ RL +L + + K D +F+ H +L+ L + K
Sbjct: 75 YICTESIFPSRRLQELIQKLEITKKHGINGDLVFVEHISTIEELEICLLHRIPTLISVQK 134
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT----SA 207
+G+IVIDSIA +R +DK RA +R + LH+L K+ I V+C NQVT S
Sbjct: 135 IGLIVIDSIAAPYRVEDWKDKSNNRAKSLRIIGQQLHKLC-KNNICVVCINQVTTDVYSN 193
Query: 208 MTHSDKNI-PALGLTY 222
+ + + N+ P LG T+
Sbjct: 194 VLNDNLNVRPTLGTTW 209
>gi|395838671|ref|XP_003792234.1| PREDICTED: DNA repair protein XRCC3 [Otolemur garnettii]
Length = 349
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L GG+ GITEL+G S GKTQL LQ+CL++Q Q H G+ +Y+C
Sbjct: 82 LSLGCPVLDGLLCGGLPLEGITELAGRSSAGKTQLALQLCLAVQFPQQHGGLEAGAVYVC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE VFPT RL QL L + K + D+IF+ H + L + + +
Sbjct: 142 TEDVFPTRRLQQLMALQTQLRTDVPGNVVQKIRFGDQIFVEHVADVDTLLECVTQKVPIL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + V RA ++ L L LS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDGQASVPRARRLQSLGSALRRLSWAFQTPVLCINQVTE 261
Query: 207 AMTH----------SDKNI-PALGLTYERAHDMRDLAHYLHE 237
A+ +D +I PALG+T+ MR +A L E
Sbjct: 262 AVQEPSSAPRPPGSTDGHICPALGITWANQLLMRLMADRLRE 303
>gi|296215965|ref|XP_002754356.1| PREDICTED: DNA repair protein XRCC3 [Callithrix jacchus]
Length = 346
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLESGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAHQPRLRTDVPGELLQRLPSGSQIFIEHAADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + V RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASVPRARHLQSLGATLRELSSTFQSPVLCINQVTE 261
Query: 207 AMTHS-----------DKNIPALGLTYERAHDMRDLAHYLHE 237
AM ++ PALG+T+ +R LA L E
Sbjct: 262 AMEEQGTAHGPPGFWDERIFPALGITWANQLLVRLLADRLRE 303
>gi|2921500|gb|AAC04805.1| XRCC3 [Homo sapiens]
gi|15079849|gb|AAH11725.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
Length = 346
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGAMLRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|332843176|ref|XP_003314577.1| PREDICTED: DNA repair protein XRCC3 isoform 1 [Pan troglodytes]
gi|410260908|gb|JAA18420.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Pan troglodytes]
Length = 346
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|30584233|gb|AAP36365.1| Homo sapiens X-ray repair complementing defective repair in Chinese
hamster cells 3 [synthetic construct]
gi|61371827|gb|AAX43738.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|61371833|gb|AAX43739.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
Length = 347
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|332254242|ref|XP_003276237.1| PREDICTED: DNA repair protein XRCC3 [Nomascus leucogenys]
Length = 346
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLLKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ +++IDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVIIDSVAAPFRCEFDSQASAPRARRLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|4885659|ref|NP_005423.1| DNA repair protein XRCC3 [Homo sapiens]
gi|153946427|ref|NP_001093588.1| DNA repair protein XRCC3 [Homo sapiens]
gi|153946430|ref|NP_001093589.1| DNA repair protein XRCC3 [Homo sapiens]
gi|20140428|sp|O43542.1|XRCC3_HUMAN RecName: Full=DNA repair protein XRCC3; AltName: Full=X-ray repair
cross-complementing protein 3
gi|20514393|gb|AAM23015.1|AF508041_1 X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
gi|2921390|gb|AAC05368.1| X-ray repair cross-complementing protein 3 [Homo sapiens]
gi|12654421|gb|AAH01036.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
gi|28071006|emb|CAD61884.1| unnamed protein product [Homo sapiens]
gi|30583673|gb|AAP36085.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Homo sapiens]
gi|60655103|gb|AAX32115.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|60655105|gb|AAX32116.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|119602243|gb|EAW81837.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602244|gb|EAW81838.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602245|gb|EAW81839.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602246|gb|EAW81840.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602247|gb|EAW81841.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|119602248|gb|EAW81842.1| X-ray repair complementing defective repair in Chinese hamster
cells 3, isoform CRA_a [Homo sapiens]
gi|123982694|gb|ABM83088.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|123997359|gb|ABM86281.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
gi|193784889|dbj|BAG54042.1| unnamed protein product [Homo sapiens]
gi|193785686|dbj|BAG51121.1| unnamed protein product [Homo sapiens]
gi|193785777|dbj|BAG51212.1| unnamed protein product [Homo sapiens]
gi|261861620|dbj|BAI47332.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [synthetic construct]
Length = 346
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|402877292|ref|XP_003902365.1| PREDICTED: DNA repair protein XRCC3 [Papio anubis]
Length = 346
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 108/222 (48%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G DS+L GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDSLLCGGLPLDGITELAGRSSVGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS-----------DKNIPALGLTYERAHDMRDLAHYLHE 237
AM ++ PALG+T+ +R LA L E
Sbjct: 262 AMEEQSAAHGPLGFWDERASPALGITWANQLLVRLLAERLRE 303
>gi|327259038|ref|XP_003214345.1| PREDICTED: DNA repair protein XRCC3-like [Anolis carolinensis]
Length = 375
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 31/219 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
+S G D L+GGI GITE++G S GKTQ+ LQ+ LS+Q P+K G +Y
Sbjct: 102 LSLGCPVLDGFLQGGIPLTGITEIAGESSAGKTQIALQLALSIQY--PYKYGGLESGAVY 159
Query: 97 ICTESVFPTARLAQLCE--------LSPLA--KPKCSDKIFITHCYEFIDLKRTLESQSG 146
ICTE FP RL QL + + P+ K K ++IF+ H + + + ++ G
Sbjct: 160 ICTEDAFPNKRLQQLIQQQANLRDDVPPIVVQKIKFGNRIFVEHTADLDAFRNCITNRIG 219
Query: 147 FIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+ ++ V +I++DSIA +FR + V +A + LHELS + +I ++C NQV
Sbjct: 220 ILLSRGMVRLIIVDSIAALFRCEFGAKDSVLKAKYLLMFGAKLHELSSQFQIPIVCINQV 279
Query: 205 TSAMTHSDKNI-----------PALGLTYERAHDMRDLA 232
T M + + + PALG+T+ MR +A
Sbjct: 280 TDTMDTAGRAVHSPSCTAQRVAPALGITWSNQLLMRLMA 318
>gi|344273765|ref|XP_003408689.1| PREDICTED: DNA repair protein XRCC3-like [Loxodonta africana]
Length = 341
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 111/242 (45%), Gaps = 36/242 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ GITEL+G S GKTQL LQ+CL++Q+ Q H G+ +YIC
Sbjct: 82 LSLGCPVLDRLLRGGLPLDGITELAGCSSAGKTQLALQLCLAVQLPQQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE VFP RL QL P L+K + D+IFI H + L + + +
Sbjct: 142 TEDVFPDRRLQQLITHQPRLRAGVPGELLSKVRFGDQIFIEHAADVDTLLECVSRRVPIL 201
Query: 149 --ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+A FR + RA ++ L L LS + V+C NQVT
Sbjct: 202 LARGMARLVVLDSVAAPFRCEFDSQALTARARHLQTLGAALRHLSCSFQSPVLCINQVTE 261
Query: 207 AMTH---------SDKNI-PALG----------LTYERAHDMRDLAHYLHEISIKHWIVV 246
SD+ + PALG LT ERA + A L + H
Sbjct: 262 VAEEQRPAGPQGFSDERVSPALGTAWSNQLLMRLTAERARGKEEPARTLRVVFAPHLPPT 321
Query: 247 IC 248
C
Sbjct: 322 SC 323
>gi|350408492|ref|XP_003488421.1| PREDICTED: DNA repair protein XRCC3-like [Bombus impatiens]
Length = 254
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 14/207 (6%)
Query: 29 FQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
+ V I E ++TG KFD++L+GGI GIT++ GA+ GKTQL LQ+CL++Q+
Sbjct: 4 YFVNAKIIKEREKFLTTGCPKFDTLLQGGITTRGITQIYGAASTGKTQLALQLCLTVQLP 63
Query: 89 QPH----KGVLYICTESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTLE 142
G +YICTE FP+ RL +L + + K D +F+ H +L+ L
Sbjct: 64 TTEGGFAAGAVYICTECTFPSRRLQELIQKLEITKKYGINGDSVFVEHISTIEELEICLL 123
Query: 143 SQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ + + K+G+I+IDSIA +R +D+ +R +R + LH+L K+ I V+C
Sbjct: 124 HRIPILMSVQKIGLIIIDSIAAPYRVEDWKDESNKRGKSLRTIGQQLHKLC-KNDICVVC 182
Query: 201 TNQVTSAM---THSDKNI--PALGLTY 222
NQVT+ M SD + P+LG+T+
Sbjct: 183 INQVTAIMHGNISSDYSSVRPSLGITW 209
>gi|297695960|ref|XP_002825186.1| PREDICTED: DNA repair protein XRCC3 [Pongo abelii]
Length = 346
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARRLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
A+ D+ + PALG+T+ +R LA L E
Sbjct: 262 AVEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|432947346|ref|XP_004084000.1| PREDICTED: DNA repair protein XRCC3-like [Oryzias latipes]
Length = 342
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 102/196 (52%), Gaps = 23/196 (11%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D +L+GG+ GGITELSG SG GKTQL LQ+ LS+Q H G+ LYICTE FP
Sbjct: 89 LDGLLRGGLPVGGITELSGQSGAGKTQLALQISLSVQYPVEHGGLGGGALYICTEDSFPI 148
Query: 106 ARLAQL----------CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVG 153
RL Q+ S + + SD ++I H + L+ L ++ + V
Sbjct: 149 RRLQQMISEQANLRSEVPSSLIRGLRFSDHVYIEHAADLDSLQVCLSRRAPVLLAAGLVR 208
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD- 212
+IV+DS+A +FR+ + + +++R + + LH+LS + V+C NQVT + D
Sbjct: 209 LIVVDSVAALFRSEFQAEDWMERNKQLLTFSSMLHQLSQEFTTPVLCINQVTDVLKDHDS 268
Query: 213 ------KNIPALGLTY 222
PALGL +
Sbjct: 269 LGPLSSSVTPALGLAW 284
>gi|397470932|ref|XP_003807064.1| PREDICTED: DNA repair protein XRCC3 [Pan paniscus]
Length = 346
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLHGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGAALRELSSAFQSPVLCINQVTE 261
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>gi|348536303|ref|XP_003455636.1| PREDICTED: DNA repair protein XRCC3-like [Oreochromis niloticus]
Length = 339
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
V G D +L+GG+ GGITEL+G SG GKTQ+ LQ+ LS+Q H G+ LY+C
Sbjct: 75 VRLGCPVLDRLLRGGLPVGGITELAGESGTGKTQVGLQLSLSVQYPAEHGGLGAGALYVC 134
Query: 99 TESVFPTARLAQL-----CELSPLAKP-----KCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL C S + + SD ++I H + L+ L ++ +
Sbjct: 135 TEDSFPIKRLHQLIGEQVCLRSDVPADLVNSLRFSDHVYIEHAADLDSLQVCLTRRARLL 194
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ V +IV+DS+A +FR + D +++R + + LH LS + V+C NQVT
Sbjct: 195 LARGLVRLIVVDSVAALFRAEFQADDWLERNRRLLTFSSTLHHLSQEFSTPVLCINQVTP 254
Query: 207 AMTH-------SDKNIPALGLTYERAHDMRDLAHYLHEISIK 241
+ + S PALGL + +R + L + I+
Sbjct: 255 SSVNFLLLRPSSSTVSPALGLAWANQVMVRLMMRRLQGMVIR 296
>gi|224051777|ref|XP_002200331.1| PREDICTED: DNA repair protein XRCC3 [Taeniopygia guttata]
Length = 347
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 31/216 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
+S G D++LKGGI GITEL+G S GKTQ+ LQ+CL +Q P+K G +Y
Sbjct: 82 LSLGCSVLDNLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQY--PYKYGGLESGAVY 139
Query: 97 ICTESVFPTARLAQLCE----------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG 146
ICTE VFP+ RL QL + + K + + IF+ + ++ + +
Sbjct: 140 ICTEDVFPSKRLQQLIDQQHKLRADVPAEIIQKIRFGNSIFVEQAADLDTFQQCITRRLS 199
Query: 147 FI--ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+ V ++VIDS+A +FR+ + + +A ++ LH LS + R ++C NQV
Sbjct: 200 LLLARGMVRLVVIDSMAALFRSEFGPAEAALKARYLQTFGAQLHSLSTRFRTPIVCINQV 259
Query: 205 TSAMTHSD-----------KNIPALGLTYERAHDMR 229
T A++ S+ + PALG+T+ MR
Sbjct: 260 TDAVSESEAAQCSWRAVGSRVTPALGITWSNQLLMR 295
>gi|403284072|ref|XP_003933408.1| PREDICTED: DNA repair protein XRCC3 [Saimiri boliviensis
boliviensis]
Length = 367
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 103 LSLGCPVLDALLRGGLPLDGITELAGHSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 162
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 163 TEDAFPHKRLQQLMAHQPRLRTDVPGELLQKLRFGSQIFIEHAADVDTLLECVNKKVPVL 222
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + + RA ++ L L ELS + V+C NQVT
Sbjct: 223 LSRGMARLVVIDSVAAPFRCEFDSQASIPRARCLQSLGATLRELSSAFQSPVLCINQVTE 282
Query: 207 AMTHS----------DKNI-PALGLTYERAHDMRDLAHYLHE 237
A+ D+ I PALG+T+ +R LA L E
Sbjct: 283 AVEEQSTVHGPPGFWDERISPALGITWANQLLVRLLADRLRE 324
>gi|340719388|ref|XP_003398136.1| PREDICTED: DNA repair protein XRCC3-like [Bombus terrestris]
Length = 254
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 14/207 (6%)
Query: 29 FQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
+ V I E ++TG KFD++L+GGI GIT++ GA+ GKTQL LQ+CL++Q+
Sbjct: 4 YFVNSKIIKEREKFLTTGCPKFDTLLQGGITTRGITQIYGAASTGKTQLALQLCLTVQLP 63
Query: 89 QPH----KGVLYICTESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTLE 142
G +YICTE FP+ RL +L + + K D +F+ H +L+ L
Sbjct: 64 ITEGGFAAGAVYICTECTFPSRRLQELIQKLEITKKYGINGDSVFVEHISTIEELEICLL 123
Query: 143 SQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ + + K+G+I+IDSIA +R +D+ ++ +R + LH+L K+ I V+C
Sbjct: 124 HRIPILMSVQKIGLIIIDSIAAPYRVEDWKDESNKKGKSLRTIGQQLHKLC-KNDICVVC 182
Query: 201 TNQVTSAMTHSDKN-----IPALGLTY 222
NQVT+ M + N P+LG+T+
Sbjct: 183 INQVTAIMHSNIPNDYLSVRPSLGITW 209
>gi|326921096|ref|XP_003206800.1| PREDICTED: DNA repair protein XRCC3-like [Meleagris gallopavo]
Length = 347
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 31/216 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
+S G D +LKGGI GITEL+G S GKTQ+ LQ+CL +Q P++ G +Y
Sbjct: 82 LSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQY--PYRYGGLESGAVY 139
Query: 97 ICTESVFPTARLAQL--------CELSP--LAKPKCSDKIFITHCYEFIDLKRTLESQSG 146
ICTE FP+ RL QL ++ P + K + + IF+ H + + +
Sbjct: 140 ICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHNCITKRLS 199
Query: 147 FIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+ + V ++VIDSIA +FR + V +A ++ LH LS + R ++C NQV
Sbjct: 200 LLLTRGTVRLVVIDSIAALFRCEFGASDSVLKARYLQTFGAQLHGLSTRFRTPIMCINQV 259
Query: 205 TSAMTHSD-----------KNIPALGLTYERAHDMR 229
T A++ S+ + PALG+T+ MR
Sbjct: 260 TDAVSESEAVQCGYSTADSRVFPALGITWANQLLMR 295
>gi|270008164|gb|EFA04612.1| spindle B [Tribolium castaneum]
Length = 274
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
+STG D+I +GGI I+E+ G +G GKTQLCLQ+ L Q+ K V+Y+C
Sbjct: 39 ISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLGKSVVYLC 98
Query: 99 TESVFPTARLAQLCELSPLA----KPKCSDKIFITHCYEFIDLKRTLESQ--SGFIENKV 152
TE FP RL L L D IFI H + LK+ L + + V
Sbjct: 99 TEDAFPIKRLKDLAITYSLKYHDLGINFEDNIFIEHLADVEQLKKCLSNSLTKLLLVKNV 158
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
G++VIDSIAGIFR+ + Y R D + L++L+ K+ V+C NQVT T ++
Sbjct: 159 GLVVIDSIAGIFRSETLDVNYKNRNQDFILIVTLLNKLAKKYGFAVVCVNQVTDNPT-TN 217
Query: 213 KNIPALGLTYERAHDMR 229
P LGL + R
Sbjct: 218 VTEPCLGLAWSNCLTYR 234
>gi|347970475|ref|XP_003436585.1| AGAP013180-PA [Anopheles gambiae str. PEST]
gi|333466691|gb|EGK96339.1| AGAP013180-PA [Anopheles gambiae str. PEST]
Length = 266
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 100/197 (50%), Gaps = 27/197 (13%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
VS G FD + GGI A GI EL+G G GKTQ+ L++ L+ Q + P+ V+YICTE
Sbjct: 25 VSFGVPVFDRLTGGGIGARGIFELAGDPGSGKTQIALKLALTAQRTVPNSCVVYICTEHR 84
Query: 103 FPTARLAQL---CELSPLAKPKCSDKIFITH----------CYEFIDLKRTLESQSGFIE 149
FP+ RL Q+ + A D F+ H C F L + LES
Sbjct: 85 FPSRRLLQMEAEYKRQQSADDAVRDHNFVDHILVEHPTLMACL-FDRLPKLLES------ 137
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
K+ +++IDSIA F E Y+ RA R + H LH+L +H + TNQV S +
Sbjct: 138 TKISVLIIDSIASPF---VEERDYISRAETFRSIVHRLHQLQERHNFAICVTNQVRSVID 194
Query: 210 HS----DKNIPALGLTY 222
S +N+PALGL +
Sbjct: 195 SSTLDDQRNVPALGLAW 211
>gi|189237371|ref|XP_971150.2| PREDICTED: similar to GA17378-PA [Tribolium castaneum]
Length = 272
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
+STG D+I +GGI I+E+ G +G GKTQLCLQ+ L Q+ K V+Y+C
Sbjct: 37 ISTGCSAIDAITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLGKSVVYLC 96
Query: 99 TESVFPTARLAQLCELSPLA----KPKCSDKIFITHCYEFIDLKRTLESQ--SGFIENKV 152
TE FP RL L L D IFI H + LK+ L + + V
Sbjct: 97 TEDAFPIKRLKDLAITYSLKYHDLGINFEDNIFIEHLADVEQLKKCLSNSLTKLLLVKNV 156
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
G++VIDSIAGIFR+ + Y R D + L++L+ K+ V+C NQVT T ++
Sbjct: 157 GLVVIDSIAGIFRSETLDVNYKNRNQDFILIVTLLNKLAKKYGFAVVCVNQVTDNPT-TN 215
Query: 213 KNIPALGLTYERAHDMR 229
P LGL + R
Sbjct: 216 VTEPCLGLAWSNCLTYR 232
>gi|345804171|ref|XP_003435154.1| PREDICTED: DNA repair protein XRCC3 [Canis lupus familiaris]
Length = 349
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 53/250 (21%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ G+TEL+G S GKTQL LQ+CL++Q H G+ +YIC
Sbjct: 82 LSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFPPRHGGLDAGAMYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE VFP RL QL +++ K S++IFI H + L + + +
Sbjct: 142 TEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEHVADVDSLLECVREKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + V RA ++ L L LS + V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDGPALVPRARHLQALGAALRRLSCAFQSPVLCINQVTE 261
Query: 207 AMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNIPAL 266
A T R H +RD ++ PAL
Sbjct: 262 ATEEQG--------TAPRPHGLRD-----------------------------ERVSPAL 284
Query: 267 GLSWSNLIIL 276
G++WSN +++
Sbjct: 285 GMTWSNQLLM 294
>gi|57529909|ref|NP_001006489.1| DNA repair protein XRCC3 [Gallus gallus]
gi|53127776|emb|CAG31217.1| hypothetical protein RCJMB04_3f19 [Gallus gallus]
Length = 347
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 31/216 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
+S G D +LKGGI GITEL+G S GKTQ+ LQ+CL +Q P++ G +Y
Sbjct: 82 LSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQY--PYRYGGLESGAVY 139
Query: 97 ICTESVFPTARLAQL--------CELSP--LAKPKCSDKIFITHCYEFIDLKRTLESQSG 146
ICTE FP+ RL QL ++ P + K + + IF+ H + + +
Sbjct: 140 ICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHNCITKRLS 199
Query: 147 FIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+ + V ++VIDSIA +FR + V +A ++ LH LS + R ++C NQV
Sbjct: 200 LLLTRGMVRLVVIDSIAALFRCEFGASDSVLKARYLQTFGAQLHGLSTRFRTPIMCINQV 259
Query: 205 TSAMTHSD-----------KNIPALGLTYERAHDMR 229
T A++ S+ + PALG+T+ MR
Sbjct: 260 TDAVSESEAAQCSYSTADSRVSPALGITWANQLLMR 295
>gi|195055951|ref|XP_001994876.1| GH17480 [Drosophila grimshawi]
gi|193892639|gb|EDV91505.1| GH17480 [Drosophila grimshawi]
Length = 349
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 110/206 (53%), Gaps = 22/206 (10%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH- 91
K P + ++ G D GGI GITE+ GASG GK+Q+ LQ+ +S+Q+ P
Sbjct: 78 KIPARLKWSRLTFGCSSLDECTGGGISIRGITEICGASGVGKSQILLQLSISVQLP-PRL 136
Query: 92 ----KGVLYICTESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE---FIDLKRT 140
KGV +ICTE VFP+ RL Q+ + P+ IFI H YE +D +
Sbjct: 137 GGLGKGVAFICTEDVFPSRRLLQISKAFEARYPEEQLNFLGNIFIEHQYESQPLLDCVKN 196
Query: 141 LESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
SQ E+ +G+I+IDS+A IFR Y + + RA DMR + H L + K+ V+C
Sbjct: 197 RLSQL-LQEHSIGLIIIDSVAAIFR-LYTD--FDDRARDMRRMVHALLSYADKYGCAVVC 252
Query: 201 TNQVTSAMTHSDKN----IPALGLTY 222
TNQ+T A +D N +P LGL +
Sbjct: 253 TNQMT-ASGQADHNALQDVPCLGLQW 277
>gi|318056252|ref|NP_001187675.1| DNA repair protein XRCC3 [Ictalurus punctatus]
gi|308323669|gb|ADO28970.1| DNA repair protein XRCC3 [Ictalurus punctatus]
Length = 349
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 27/200 (13%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D +L GG+ GITEL+G S GKTQ LQ+ LS+Q S+ H G+ +YICTE FP
Sbjct: 89 LDGLLHGGLPLHGITELAGESAAGKTQFGLQLSLSVQYSREHGGLGAGAVYICTEDPFPI 148
Query: 106 ARLAQL----CELSPLAKP------KCSDKIFITHCYEFIDLKR--TLESQSGFIENKVG 153
RL QL L P P + SD I+I H + L+R T ++ V
Sbjct: 149 KRLRQLITQQSRLRPDVPPALIRSIRFSDNIYIEHTADLEALQRCVTQRLRTLLERGLVR 208
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD- 212
+IV+DS+A +FR+ + D+ ++RA + + LH LS + V C NQV+ + +
Sbjct: 209 LIVVDSVAALFRSEFQADEAIERARHLLAFSATLHRLSHTYSTPVFCINQVSDVVDGPNP 268
Query: 213 ----------KNIPALGLTY 222
K +PALG+ +
Sbjct: 269 SRRDYGLVESKVLPALGIIW 288
>gi|351698467|gb|EHB01386.1| DNA repair protein XRCC3, partial [Heterocephalus glaber]
Length = 349
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 112/230 (48%), Gaps = 40/230 (17%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G + D +L GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPRLDRLLSGGLPLDGITELAGRSSSGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSPLAKP--------------KCSDKIFITHCYEFIDLKRTLESQ 144
TE VFP+ RL QL +A+P + D+IF+ H + L + +
Sbjct: 142 TEDVFPSKRLRQL-----IAQPQLRADVPGEVVQSIRFGDQIFVEHAADVDALLECVSHK 196
Query: 145 SGFIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
+ ++ V ++V+DS+A FR + V RA ++ L L LS + V+C N
Sbjct: 197 VPMLLSRGLVRLLVVDSVAAPFRCEFDSQASVARARLLQSLGATLRRLSSTFQSPVLCVN 256
Query: 203 QVTSAM---------------THSDKNIPALGLTYERAHDMRDLAHYLHE 237
QV+ + ++ PALG+T+ +R +A + E
Sbjct: 257 QVSPEVWDAGPVKGSVPFCPSPQDERLCPALGITWANQLLVRLMADRVRE 306
>gi|301766940|ref|XP_002918902.1| PREDICTED: DNA repair protein XRCC3-like [Ailuropoda melanoleuca]
Length = 349
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ G+TEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDGLLRGGLPLDGLTELAGHSSTGKTQLALQLCLTVQFPRQHGGLGAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE VFP RL QL + + K ++IFI H + L + + +
Sbjct: 142 TEDVFPNLRLQQLIAQQRHLRTDVPGDVVDRIKFGNQIFIKHVADVDTLLECVSKKVPVL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + + RA ++ L L LS R V+C NQVT
Sbjct: 202 LSRGMARLVVIDSVAAPFRCEFDGPAAIPRARRLQALGAALRRLSGSFRSPVLCINQVTE 261
Query: 207 AMTHSD-----------KNIPALGLTYERAHDMR 229
A D + PALG+T+ MR
Sbjct: 262 AAEEQDAAPGPQGLWDKRVSPALGMTWSNQLLMR 295
>gi|332017004|gb|EGI57803.1| DNA repair protein XRCC3 [Acromyrmex echinatior]
Length = 247
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 16/194 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TG + D+ L GGI GIT+L GA+G GKTQL LQ+CL++Q+ G+ +YIC
Sbjct: 11 LTTGCSRLDAKLGGGIPCRGITQLYGAAGTGKTQLALQLCLTVQLPITAGGLGAGAIYIC 70
Query: 99 TESVFPTARLAQLCELSPLAKPKC--SDKIFITHCYEFIDLKRTLESQSGFIEN--KVGM 154
TE+ FP+ RL QL S +AK D I + H +L L+ + + N K+G+
Sbjct: 71 TETAFPSKRLQQLLTKSEIAKTHFVNGDVILVGHIATSEELVLCLQHRVPVLMNTRKIGL 130
Query: 155 IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA------M 208
++IDSIA +R D V + R + LHEL + VIC NQV++ +
Sbjct: 131 LIIDSIAAPYRIEDWND--VLQCKTKRSIGRQLHELCKNDDLCVICINQVSAVIDGHRLI 188
Query: 209 THSDKNIPALGLTY 222
+ PALGL +
Sbjct: 189 SEGANEQPALGLAW 202
>gi|281354182|gb|EFB29766.1| hypothetical protein PANDA_007427 [Ailuropoda melanoleuca]
Length = 331
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ G+TEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 64 LSLGCPVLDGLLRGGLPLDGLTELAGHSSTGKTQLALQLCLTVQFPRQHGGLGAGAVYIC 123
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE VFP RL QL + + K ++IFI H + L + + +
Sbjct: 124 TEDVFPNLRLQQLIAQQRHLRTDVPGDVVDRIKFGNQIFIKHVADVDTLLECVSKKVPVL 183
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + + RA ++ L L LS R V+C NQVT
Sbjct: 184 LSRGMARLVVIDSVAAPFRCEFDGPAAIPRARRLQALGAALRRLSGSFRSPVLCINQVTE 243
Query: 207 AMTHSD-----------KNIPALGLTYERAHDMR 229
A D + PALG+T+ MR
Sbjct: 244 AAEEQDAAPGPQGLWDKRVSPALGMTWSNQLLMR 277
>gi|118151310|ref|NP_001071585.1| DNA repair protein XRCC3 [Bos taurus]
gi|122132264|sp|Q08DH8.1|XRCC3_BOVIN RecName: Full=DNA repair protein XRCC3; AltName: Full=X-ray repair
cross-complementing protein 3
gi|115304929|gb|AAI23743.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Bos taurus]
gi|296475234|tpg|DAA17349.1| TPA: DNA repair protein XRCC3 [Bos taurus]
Length = 341
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q+ H G+ +Y+C
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGAGAVYVC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL ++K + +IFI H + L + + + +
Sbjct: 142 TEDAFPSRRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVREKVPVL 201
Query: 149 --ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++VIDS+A FR + RA + L L LS R V+C NQVT
Sbjct: 202 LARGMARLVVIDSVAAPFRCEFDGAALALRAQRLLALGAELRRLSCAFRSPVLCVNQVTE 261
Query: 207 AMTHSD------KNIPALGLTYERAHDMRDLA 232
A+ D PALG+T+ +R LA
Sbjct: 262 AVEEQDLVAGPPGMSPALGITWANQLLVRLLA 293
>gi|157109848|ref|XP_001650848.1| spindle-b recombination protein spn-b [Aedes aegypti]
gi|108878885|gb|EAT43110.1| AAEL005399-PA [Aedes aegypti]
Length = 266
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 16/193 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKGVLYICTES 101
+ G + D + GGI + GI E++G G GKTQ+CL + L+ Q+ + KGV+YI TE
Sbjct: 30 IKLGVDALDQLTGGGISSRGIVEIAGDPGSGKTQMCLHLALACQMQCETRKGVVYISTEH 89
Query: 102 VFPTARLAQLCELSPLA------KPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVG 153
FP+ RL Q+ ++ K +D IF+ H + L+ + + + N +
Sbjct: 90 PFPSKRLVQMEQVMKRNLRITEDSMKFTDNIFVEHLNTAVALEECVNQRLPILLENNPIS 149
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS-- 211
+++IDSI + E +V RAH R + + LH L K V+CTNQV S + S
Sbjct: 150 LLIIDSITAAYTE---EQNFVDRAHSFRRVVNALHSLQDKFDFGVLCTNQVRSVVDSSTL 206
Query: 212 --DKNIPALGLTY 222
++ +PA+GL +
Sbjct: 207 DDERIVPAMGLAW 219
>gi|440898955|gb|ELR50346.1| DNA repair protein XRCC3 [Bos grunniens mutus]
Length = 340
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q+ H G+ +Y+C
Sbjct: 81 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGAGAVYVC 140
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL ++K + +IFI H + L + ++ + +
Sbjct: 141 TEDAFPSHRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVKEKVPVL 200
Query: 149 --ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++VIDS+A FR + RA + L L LS R V+C NQVT
Sbjct: 201 LARGMARLVVIDSVAAPFRCEFDGAALALRAQRLLALGAELRRLSCAFRSPVLCVNQVTE 260
Query: 207 AMTHSD------KNIPALGLTYERAHDMRDLA 232
A+ D PALG+T+ +R LA
Sbjct: 261 AVEEQDLVAGPPGMSPALGITWANQLLVRLLA 292
>gi|340375202|ref|XP_003386125.1| PREDICTED: DNA repair protein XRCC3-like [Amphimedon queenslandica]
Length = 335
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 15/190 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+S G D L+GG+ +TE++G S GK+QLCLQ+ L++Q+ + H G +YI
Sbjct: 75 LSLGCPLIDETLQGGLLPRSLTEVAGTSAAGKSQLCLQLSLTVQLREKHGGYSSKAVYIS 134
Query: 99 TESVFPTARLAQLCEL-----SPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-- 151
TE F + RL +L + S L D + + H +LK L + + K
Sbjct: 135 TEGPFHSKRLKELAQFMAGKYSYLNAQTLMDNVLVHHSATVQELKVLLNHELPCLLQKNP 194
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+ +I+IDS+A +FR Y+ D RA+D++ +A LH L +H++ ++CTNQ+TS T
Sbjct: 195 RNIRLIIIDSLASLFRVEYSYDD-SSRAYDLKLIASSLHLLIYQHQLTIVCTNQMTSD-T 252
Query: 210 HSDKNIPALG 219
S+ PALG
Sbjct: 253 KSNTTRPALG 262
>gi|410916047|ref|XP_003971498.1| PREDICTED: DNA repair protein XRCC3-like [Takifugu rubripes]
Length = 271
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 32 GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH 91
G+ P + + G + +L+GG+ G ITELSG SG GKTQL LQ+CL +Q +
Sbjct: 71 GECPRLEPGLRLGVGCVVINELLRGGLPVGRITELSGQSGAGKTQLALQLCLCVQYPTDY 130
Query: 92 ----KGVLYICTESVFPTARLAQLC--------ELSP--LAKPKCSDKIFITHCYEFIDL 137
G +YICTE+ FP RL QL ++ P ++ K SD +++ H + L
Sbjct: 131 GGLDSGAVYICTENSFPIRRLQQLVTDQYVMRSDVPPSLISTLKFSDHVYVEHTADLDSL 190
Query: 138 KRTLESQ--SGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHR 195
+ L + ++V+DS+A +FR + ++ +R M +++ LH LS +
Sbjct: 191 QVCLSRRVPLLLARGLARLVVLDSLAALFRCEFQAAEWQERTRQMLNVSSTLHRLSQEFS 250
Query: 196 IVVICTNQVTSAMTHSDKNI 215
V+C NQVT + +DK++
Sbjct: 251 TTVLCINQVTDVFSDTDKSL 270
>gi|195446056|ref|XP_002070607.1| GK10943 [Drosophila willistoni]
gi|194166692|gb|EDW81593.1| GK10943 [Drosophila willistoni]
Length = 349
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 23/197 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKGVLYIC 98
++ G D GGI GITE+ GASG GKTQL LQ+ L L + +GV +IC
Sbjct: 89 ITFGCPALDRCTGGGIVTRGITEICGASGVGKTQLLLQLAVCVQLPLHLGGLARGVAFIC 148
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYEFIDLKRTLESQSGFI-----E 149
TE FP+ R+ ++ ++ PK + +F+ +E +K LE S + +
Sbjct: 149 TEDAFPSRRMLEISKVFEARYPKENLNFLANVFVEQQFE---VKPLLECVSNRLPQLMQQ 205
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-SAM 208
+ +G+I+IDS+A IFR Y +R DMR LA+ L + K+ VIC NQ+T S+
Sbjct: 206 HAIGLIIIDSVAAIFR---LFTDYDERTRDMRRLANDLLTYADKYNCAVICINQMTSSSA 262
Query: 209 THSDK---NIPALGLTY 222
T DK +IP LGL +
Sbjct: 263 TRDDKPMQDIPCLGLQW 279
>gi|209946406|gb|ACI97434.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVXNHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946400|gb|ACI97431.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946358|gb|ACI97410.1| spindle B [Drosophila melanogaster]
gi|209946362|gb|ACI97412.1| spindle B [Drosophila melanogaster]
gi|209946366|gb|ACI97414.1| spindle B [Drosophila melanogaster]
gi|209946370|gb|ACI97416.1| spindle B [Drosophila melanogaster]
gi|209946372|gb|ACI97417.1| spindle B [Drosophila melanogaster]
gi|209946374|gb|ACI97418.1| spindle B [Drosophila melanogaster]
gi|209946380|gb|ACI97421.1| spindle B [Drosophila melanogaster]
gi|209946382|gb|ACI97422.1| spindle B [Drosophila melanogaster]
gi|209946386|gb|ACI97424.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946394|gb|ACI97428.1| spindle B [Drosophila melanogaster]
Length = 404
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946354|gb|ACI97408.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946344|gb|ACI97403.1| spindle B [Drosophila melanogaster]
gi|209946356|gb|ACI97409.1| spindle B [Drosophila melanogaster]
gi|209946384|gb|ACI97423.1| spindle B [Drosophila melanogaster]
gi|209946396|gb|ACI97429.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|17136506|ref|NP_476740.1| spindle B [Drosophila melanogaster]
gi|3643817|gb|AAC42663.1| spindle B [Drosophila melanogaster]
gi|7299874|gb|AAF55050.1| spindle B [Drosophila melanogaster]
gi|201065577|gb|ACH92198.1| FI03211p [Drosophila melanogaster]
gi|209946376|gb|ACI97419.1| spindle B [Drosophila melanogaster]
gi|209946392|gb|ACI97427.1| spindle B [Drosophila melanogaster]
gi|209946398|gb|ACI97430.1| spindle B [Drosophila melanogaster]
gi|209946404|gb|ACI97433.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946360|gb|ACI97411.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946368|gb|ACI97415.1| spindle B [Drosophila melanogaster]
gi|209946390|gb|ACI97426.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|442535550|gb|AGC52848.1| XRCC3, partial [Macrobiotus cf. harmsworthi EABP-2013]
Length = 230
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 24/227 (10%)
Query: 7 MLKLGFQEWEVNKVKDLKKKKAF--------QVGKNPIDMTEIVVSTGSEKFDSILKGGI 58
M G EV++V+ LK KAF ++ DM ++S G D +GG+
Sbjct: 6 MFHAGITLSEVDQVR-LKAAKAFFKPKLTDYRLSTEKSDMDNKLLSLGCPHLDRFFRGGL 64
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ E +G +G GKTQ+CLQ+ + Q+ + G VLYI TE+ FP RL ++ E
Sbjct: 65 RLEHLVEFTGLAGSGKTQICLQLATTAQLPEEKGGLNGDVLYIFTENNFPAGRLVEIVEY 124
Query: 115 -------SPLAKPKCSDKIFITHCYEFIDLKRTLESQ-SGFIENK-VGMIVIDSIAGIFR 165
+D+IF+ H + L+ LE + G + K + +++IDSI +FR
Sbjct: 125 RKSLSMAQSFPSVPSTDRIFVEHLDTYEKLEEFLEGKVYGMLSQKPIKLLIIDSITNVFR 184
Query: 166 NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
Y + K +R+ ++ + L EL K+ ++VIC NQV+ + D
Sbjct: 185 --YYDGKLEERSKKIQCIGRILEELKSKYSLMVICANQVSDVINDRD 229
>gi|291410935|ref|XP_002721745.1| PREDICTED: X-ray repair cross complementing protein 3-like
[Oryctolagus cuniculus]
Length = 344
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ GITEL+G GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 80 LSLGCPVLDGLLRGGLPLDGITELAGPGSAGKTQLALQLCLAVQFPRQHGGLQAGAVYIC 139
Query: 99 TESVFPTARLAQL----------CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FPT RL QL + K + S +IF+ H + L + + +
Sbjct: 140 TEGAFPTRRLQQLIGQHWRLRADVARDEVGKIRFSSQIFVEHAADVDALLECVTRKVPVL 199
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR + V RA ++ L L LS + V+C NQVT
Sbjct: 200 LSRGMARLVVIDSVAAPFRCEFDAQASVPRARRLQALGAALRRLSHAFQSPVLCINQVTD 259
Query: 207 AMTHSD-----------KNIPALGLTY 222
+ D + PALG +
Sbjct: 260 TVEEQDTAPGLQGFGDTRASPALGTAW 286
>gi|125775489|ref|XP_001358960.1| GA17378 [Drosophila pseudoobscura pseudoobscura]
gi|54638701|gb|EAL28103.1| GA17378 [Drosophila pseudoobscura pseudoobscura]
Length = 348
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 18/195 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITE+ GA+G GKTQL LQ+ L +Q+ +GV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITEICGAAGVGKTQLLLQLALCVQLPVKLGGLGRGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYEFIDLKRTLESQSGFI--ENKV 152
TE FP RL ++ + P+ IF+ H YE L + ++ + ++ +
Sbjct: 148 TEDAFPARRLLEMSKALEARYPQEQLNFLGNIFVEHQYESQPLINCVSNRLPRLLQQHSI 207
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----A 207
G+I+IDS+A IFR Y + +++RA MR LA L + K+ V+C NQV S A
Sbjct: 208 GLIIIDSVAAIFR-LYTD--FLERARQMRRLADALISYADKYNCAVVCVNQVASSGSGLA 264
Query: 208 MTHSDKNIPALGLTY 222
+P LGL +
Sbjct: 265 TGPLQDEVPCLGLQW 279
>gi|209946378|gb|ACI97420.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 96/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADAXXSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946388|gb|ACI97425.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR Y Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR-LYX--XYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|17944958|gb|AAL48542.1| RE02671p [Drosophila melanogaster]
Length = 341
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 97/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKT+L LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTELLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|170044836|ref|XP_001850037.1| DNA-repair protein XRCC3 [Culex quinquefasciatus]
gi|167867962|gb|EDS31345.1| DNA-repair protein XRCC3 [Culex quinquefasciatus]
Length = 281
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 30/194 (15%)
Query: 56 GGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTESVFPTARLAQLCEL 114
GGI A G+ E++G +G GKTQL L + L+ Q P +GV+YI TE FP+ RL Q+ +
Sbjct: 44 GGISARGVVEIAGDAGSGKTQLALHLALTCQQQCPERRGVVYISTEHPFPSKRLVQMEQT 103
Query: 115 SPLAKP------KCSDKIFITHC-----YEFIDLKRTLESQSGFIE------------NK 151
+ K SD IF+ H + I + L + S + N
Sbjct: 104 LRNSSGVGHEVGKYSDNIFVEHLNNPVGLDLIYFEDVLINNSALEQCITDRLPVLLENNP 163
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+ ++VIDSIA ++ + E+ YV+RA R L H LH L + V +CTNQV + +
Sbjct: 164 IRLLVIDSIAAVYAD---EEDYVERAESFRRLVHSLHALQERFDFVTVCTNQVRAVVDDY 220
Query: 212 D---KNIPALGLTY 222
D K IPALGL +
Sbjct: 221 DGEEKVIPALGLAW 234
>gi|195144506|ref|XP_002013237.1| GL23505 [Drosophila persimilis]
gi|194102180|gb|EDW24223.1| GL23505 [Drosophila persimilis]
Length = 348
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 18/195 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITE+ GA+G GKTQL LQ+ L +Q+ +GV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITEICGAAGVGKTQLLLQLALCVQLPLKLGGLGRGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYEFIDLKRTLESQSGFI--ENKV 152
TE FP R+ ++ + P+ IF+ H YE L + ++ + ++ +
Sbjct: 148 TEDAFPARRMLEMSKALEARYPQEQLNFLGNIFVEHQYESQPLINCVSNRLPRLLQQHSI 207
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----A 207
G+I+IDS+A IFR Y + +++RA MR LA L + K+ V+C NQV S A
Sbjct: 208 GLIIIDSVAAIFR-LYTD--FLERARQMRRLADALISYADKYNCAVVCVNQVASSGSGLA 264
Query: 208 MTHSDKNIPALGLTY 222
+P LGL +
Sbjct: 265 TGSLQDEVPCLGLQW 279
>gi|149044063|gb|EDL97445.1| rCG27697 [Rattus norvegicus]
Length = 345
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D L GG+ GIT L+G S GKTQL LQ+CL++Q + + G+ +YIC
Sbjct: 82 LSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCE-LSPL---------AKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL E L L K + + IFI H + L + + +
Sbjct: 142 TEDAFPSKRLWQLIEQLQELRTDVPGEVTQKIRFGNHIFIEHAADVDTLMECVSKRVPIL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT- 205
++ ++V+DSIA FR + RA + L L LS R V+C NQVT
Sbjct: 202 LSRGMARLVVVDSIAAPFRCEFHLQASAVRAKHLHSLGAALQRLSSTFRSPVLCINQVTE 261
Query: 206 ------SAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISI 240
SA ++ PALG+T+ M+ + +HE S+
Sbjct: 262 MVEDQESAGAWEERLSPALGITWANQLLMQLMVDRIHEDSV 302
>gi|395504462|ref|XP_003756568.1| PREDICTED: DNA repair protein XRCC3 [Sarcophilus harrisii]
Length = 346
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 108/210 (51%), Gaps = 26/210 (12%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTES 101
G + +L+GG+ GI+EL G S GKTQ+ LQ+ L +Q + GV+YICTE
Sbjct: 85 GCSILNRLLRGGLPLVGISELVGQSSAGKTQIGLQLSLCVQYPYEYGGLESGVIYICTED 144
Query: 102 VFPTARLAQLCELS-------P---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK 151
VFP RL QL L P + K K + IFI H + L + ++ + ++
Sbjct: 145 VFPDKRLQQLIALQHQLRTDVPGEIIKKIKFGNSIFIEHVADIDTLFECIAKRAPILLSR 204
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--- 206
V +I+IDSIA +FR + + + +A ++ L L++LS + V+C NQ+TS
Sbjct: 205 GMVRLIIIDSIAALFRCEFGIQQSITKAKYLQTLGAKLYQLSSGFQSPVLCINQITSTVD 264
Query: 207 ----AMTHSD---KNIPALGLTYERAHDMR 229
A T+ D K PALG+T+ MR
Sbjct: 265 ERGLAGTNMDVLEKVSPALGITWSNQLLMR 294
>gi|209946364|gb|ACI97413.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 96/195 (49%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+ IFR Y Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVXXIFR-LYX--XYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|147903064|ref|NP_001079887.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Xenopus laevis]
gi|33417158|gb|AAH56103.1| MGC69118 protein [Xenopus laevis]
Length = 350
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
+S G + D+ L+GGI GITE++G S GKTQ+ LQ+CLS+Q + G +YIC
Sbjct: 82 LSLGCKVLDNFLRGGIPLVGITEIAGESSAGKTQIGLQLCLSVQYPVEYGGLASGAVYIC 141
Query: 99 TESVFPTARLAQLCELS-------P---LAKPKCSDKIFITHCYEFIDLKRTLESQSG-- 146
TE FP+ RL QL + P + + D IF+ H + L ++ +
Sbjct: 142 TEDAFPSKRLQQLIKSQHKLRSDVPSDVIKNIRFGDSIFVEHTADVDTLTECIKKKVPVL 201
Query: 147 FIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + ++VIDSIA +FR +A +A ++ L LH +S + V+C NQVT
Sbjct: 202 LLRGSIRLVVIDSIAALFRCEFAAKDAAVKAKHLQTLGAKLHNISNRFITPVLCINQVTD 261
Query: 207 AM----THSDKN--------IPALGLTYERAHDMR 229
+ + D N +PALG+++ MR
Sbjct: 262 RVREMNSEQDDNLGLQDKKVVPALGISWSNQLLMR 296
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 12/61 (19%)
Query: 228 MRDLAHYLHEISIKHWIVVICTNQVTSAM----THSDKN--------IPALGLSWSNLII 275
++ L LH IS + V+C NQVT + + D N +PALG+SWSN ++
Sbjct: 235 LQTLGAKLHNISNRFITPVLCINQVTDRVREMNSEQDDNLGLQDKKVVPALGISWSNQLL 294
Query: 276 L 276
+
Sbjct: 295 M 295
>gi|148686665|gb|EDL18612.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Mus musculus]
Length = 349
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D L GG+ GIT L+G S GKTQL LQ+CL++Q + + G+ +YIC
Sbjct: 82 LSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL P + K + S+ IFI H + L + + +
Sbjct: 142 TEDAFPSKRLWQLIAQQPRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVSKKVPIL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++V+DSIA FR + RA + L L LS R V+C NQVT
Sbjct: 202 LSRGMARLVVVDSIAAPFRCEFHLQASAIRAKLLLSLGATLRRLSSTFRSPVLCINQVTD 261
Query: 207 ----------AMTHSDKNI-PALGLTYERAHDMRDLAHYLHE 237
++ S++ + PALG+T+ MR + HE
Sbjct: 262 MVEDQQSVSRSLGASEERLSPALGITWANQLLMRLMVDRTHE 303
>gi|209946402|gb|ACI97432.1| spindle B [Drosophila melanogaster]
Length = 341
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 95/195 (48%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS D GG+ GITEL GA+G GKTQL Q+ L +Q+ + KGV YIC
Sbjct: 88 VSXXCSALDRCTGGGVVTRGITELCGAAGVGKTQLLXQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|126290417|ref|XP_001373207.1| PREDICTED: DNA repair protein XRCC3-like [Monodelphis domestica]
Length = 379
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 26/210 (12%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTES 101
G F+ +L+GG+ GITEL G S GKTQ+ LQ+ L +Q + G +YICTE
Sbjct: 85 GCPVFNRLLQGGLPLVGITELVGQSSAGKTQIGLQLSLCVQYPYEYGGLESGAIYICTED 144
Query: 102 VFPTARLAQLCELS-------P---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK 151
VFP RL QL L P + K K + IFI H + L + ++ + ++
Sbjct: 145 VFPDKRLQQLIALQHQLRTDVPQDVIKKIKFGNSIFIEHAADIDALFECVTKRAPILLSR 204
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--- 206
V +I+IDSIA +FR + + +A ++ L LH+LS + V+C NQVT
Sbjct: 205 GMVRLIIIDSIAALFRCEFGIQHSITKAKYLQTLGAKLHQLSSGFQSPVLCINQVTDTVD 264
Query: 207 ----AMTHSD---KNIPALGLTYERAHDMR 229
A T+ D + PALG+T+ MR
Sbjct: 265 ERGLAGTNLDVLARVSPALGITWSNQLLMR 294
>gi|62859281|ref|NP_001016141.1| X-ray repair complementing defective repair in Chinese hamster
cells 3 [Xenopus (Silurana) tropicalis]
gi|110645694|gb|AAI18906.1| xrcc3 protein [Xenopus (Silurana) tropicalis]
Length = 348
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 53/250 (21%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
+S G + D+ L+GG+ GITE++G S GKTQ+ LQ+CLS+Q + G +YIC
Sbjct: 82 LSLGCKVLDNFLRGGVPLVGITEIAGESSAGKTQIGLQLCLSVQYPVEYGGLASGAVYIC 141
Query: 99 TESVFPTARLAQLCE----------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-- 146
TE FP+ RL QL + + + D IF+ H + L + +
Sbjct: 142 TEDAFPSKRLQQLIKSQHKLRSDVPTEVIKNIRFGDSIFVEHTADVDTLTECITKKVPVL 201
Query: 147 FIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +++IDSIA +FR +A +A ++ L LH +S + V+C NQVT
Sbjct: 202 LLRGSIRLVIIDSIAALFRCEFAAKDAAIKAKHLQTLGAKLHSMSNRFLTPVLCINQVTD 261
Query: 207 AMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNIPAL 266
+ + LGL K +PAL
Sbjct: 262 RVREMNSEQIDLGL-------------------------------------QDKKVVPAL 284
Query: 267 GLSWSNLIIL 276
G+SWSN +++
Sbjct: 285 GISWSNQLLM 294
>gi|342879892|gb|EGU81125.1| hypothetical protein FOXB_08399 [Fusarium oxysporum Fo5176]
Length = 439
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 21/203 (10%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
V+ST E D+ L GG+ G ITE++G SG GKTQ L +CL++Q+ PH + LYI
Sbjct: 82 VISTLDEGLDAALGGGVPVGVITEITGESGAGKTQALLSLCLAVQLPPPHGLGREALYIS 141
Query: 99 TESVFPTARLAQLCELSPLAK----PKCSDKIFITHCYEFIDLKRT---LESQSGFI--E 149
TE+ T+RLAQ+ +P+ + P+ + H DL+ L+ Q +
Sbjct: 142 TEAALATSRLAQMLNSNPILQQYDDPETRPSLDAIHSAVTPDLETQDHILDFQVPVLLSR 201
Query: 150 NKVGMIVIDSIAGIFRNTYAE-----DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+K+G+I++DS+A +R + R+ ++ L L +L+ +H + V+ NQV
Sbjct: 202 HKIGLIILDSVAANYRAEFERQGSHGSNMAARSAELVRLGALLRDLARRHNLAVVVANQV 261
Query: 205 TS--AMTHSDKNIP--ALGLTYE 223
A + + ++ P + G+ YE
Sbjct: 262 ADRFASSSTPRHAPPRSSGVAYE 284
>gi|410933223|ref|XP_003979991.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Takifugu
rubripes]
Length = 346
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 33/220 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ T S + D+ L GG G +TE+ G G GKTQLCLQ+ + QV + G V+YI
Sbjct: 83 IVTFSSQLDAALGGGAPVGRVTEVCGVPGVGKTQLCLQLAVDAQVPRCFGGVGGQVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCS---------------------DKIFITHCYEFIDL 137
TE F R+A +L+ A CS +F+ C+++I+L
Sbjct: 143 TEGSFLIQRVA---DLAAAAVNHCSLLVEDQEQRVAMETFTVESILSNMFVVRCHDYIEL 199
Query: 138 KRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHR 195
L GF+ + +V ++VIDS+A FR + D+ +QR + A L ++ H
Sbjct: 200 LAELHLMPGFLSDHPRVRLLVIDSVASPFRPLF--DELLQRTRLLSGFAQQLLSMATSHD 257
Query: 196 IVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
I V+ TNQ+T+ + + +PALG ++ A +R L +
Sbjct: 258 IAVVITNQMTTRVQGAQSQLVPALGDSWGHAATIRLLLQW 297
>gi|408388465|gb|EKJ68149.1| hypothetical protein FPSE_11616 [Fusarium pseudograminearum CS3096]
Length = 445
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 98/188 (52%), Gaps = 20/188 (10%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
V+ST + D+IL GG+ G +TE +G SG GKTQ L +CL++Q+ PH + LYI
Sbjct: 88 VISTLDDGLDAILGGGVPVGAVTEFTGESGAGKTQALLSLCLAVQLPSPHGLGREALYIS 147
Query: 99 TESVFPTARLAQLCELSPLAKP-KCSDKIFITHCYEFIDLKRTLESQSGFIE-------- 149
TE+ T+RLAQ+ + +P+ + D+ + + I LE+Q ++
Sbjct: 148 TEATMATSRLAQMLKSNPIIQQYDVDDRPSLDAIHSTI--TPDLETQDHILDFQVPVLLS 205
Query: 150 -NKVGMIVIDSIAGIFRNTYAE-----DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++G+I++DS+A +R + R+ ++ L L +L+ +H I V+ NQ
Sbjct: 206 RHRIGLIILDSVAANYRAEFERQGTHGSNMAARSAELVRLGALLRDLARRHNIAVVVANQ 265
Query: 204 VTSAMTHS 211
V + S
Sbjct: 266 VADRFSSS 273
>gi|21312694|ref|NP_083151.1| DNA repair protein XRCC3 [Mus musculus]
gi|20140780|sp|Q9CXE6.1|XRCC3_MOUSE RecName: Full=DNA repair protein XRCC3; AltName: Full=X-ray repair
cross-complementing protein 3
gi|12852383|dbj|BAB29391.1| unnamed protein product [Mus musculus]
Length = 349
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 27/222 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D L GG+ GIT L+G S GKTQL LQ+CL++Q + + G+ +YIC
Sbjct: 82 LSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCEL-------SP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL +P + K + S+ IFI H + L + + +
Sbjct: 142 TEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVSKKVPIL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++V+DSIA FR + RA + L L LS R V+C NQVT
Sbjct: 202 LSRGMARLVVVDSIAAPFRCEFHLQASAIRAKLLLSLGATLRRLSSTFRSPVLCINQVTD 261
Query: 207 ----------AMTHSDKNI-PALGLTYERAHDMRDLAHYLHE 237
++ S++ + PALG+T+ MR + HE
Sbjct: 262 MVEDQQSVSRSLGASEERLSPALGITWANQLLMRLMVDRTHE 303
>gi|149408647|ref|XP_001508473.1| PREDICTED: DNA repair protein XRCC3-like [Ornithorhynchus anatinus]
Length = 402
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 63 ITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSP-- 116
ITEL+G S GKTQ+ +Q+CLS+Q + G+ +YICTE VFP RL QL
Sbjct: 102 ITELAGRSSAGKTQIGMQLCLSVQYPPLYGGLGAGAVYICTEDVFPNKRLQQLIAQQQKL 161
Query: 117 --------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRN 166
+ + K + IFI H + L+ + + + ++V+DS+A +FR
Sbjct: 162 RADIPGEVIERMKFGNNIFIEHAADLETLQDCVGKRVPILLARGMARLVVVDSVAALFRC 221
Query: 167 TYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM-----THSDKNI------ 215
+ V RA ++ L LH+LS + V+C NQVT + HS+ +
Sbjct: 222 EFGARDSVGRARCLQSLGAKLHQLSAQFDSPVLCINQVTDILDERETAHSNFGLEEEAVT 281
Query: 216 PALGLTYERAHDMRDLAHYL 235
PALGLT+ MR + H L
Sbjct: 282 PALGLTWSNQLLMRMMVHRL 301
>gi|54400704|ref|NP_001006101.1| DNA repair protein RAD51 homolog 3 [Danio rerio]
gi|53734042|gb|AAH83214.1| Rad51 homolog C (S. cerevisiae) [Danio rerio]
gi|182888768|gb|AAI64186.1| Rad51c protein [Danio rerio]
Length = 362
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D + GG+ G TE+ GA G GKTQLC+Q+ + +Q+ G+ LYI TE F
Sbjct: 93 LDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQIPVFFGGLGGKALYIDTEGSFLV 152
Query: 106 ARLAQLCE------------------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF 147
R+A + E L L K +F+ C++++ L + F
Sbjct: 153 QRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKILSNLFLVRCHDYVKLLAEVYLLPDF 212
Query: 148 IEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+ +V ++VIDSIA FR+ + + QR + LA L +L+ +HR+ V+ TNQ+T
Sbjct: 213 LSEHPEVRLVVIDSIAFPFRHDF--EDLSQRTRLLNGLAQQLIQLATQHRVAVVLTNQMT 270
Query: 206 SAMTHS-DKNIPALGLTYERAHDMRDLAHY 234
+ +++ K +PALG ++ A R + H+
Sbjct: 271 TRVSNGQSKLVPALGESWGHAATQRLILHW 300
>gi|213402507|ref|XP_002172026.1| DNA repair and recombination protein radA [Schizosaccharomyces
japonicus yFS275]
gi|212000073|gb|EEB05733.1| DNA repair and recombination protein radA [Schizosaccharomyces
japonicus yFS275]
Length = 358
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 55/257 (21%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+TG + D L GGI ITE+SG SG GK+Q C+Q+CL++Q+ + G+ ++I T
Sbjct: 77 TTGDTEIDKALHGGIALDHITEISGESGSGKSQFCIQLCLTVQLPKSVGGLDRAAVFIST 136
Query: 100 ESVFPTARLAQLCELSPLAKPK---------CSDKIFITHCYEFIDLKRTLESQSGFIEN 150
ES T RL QL + L P D+++ C + + +E Q +
Sbjct: 137 ESGLETRRLFQLAKFLSLQYPNDDLSYLSRHPGDRVYTILCPDLESQEHIIEYQLPILMQ 196
Query: 151 KV--GMIVIDSIAGIFRNTYAEDKYVQ-------------RAHDMRDLAHYLHELSIKHR 195
+V G+IV+DS+A +R AE +Y + R + + LA L EL+ KH
Sbjct: 197 RVNIGLIVLDSVAANYR---AELRYSRNHPNASSLGNIATRGNQLAKLASNLRELAHKHN 253
Query: 196 IVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSA 255
V+ NQV+ ++ S I L Y+ W +
Sbjct: 254 AAVVIANQVSDRVSRSYDQIGLFSLDYQ-----------------SQWFNGWDDTDI--- 293
Query: 256 MTHSDKNIPALGLSWSN 272
D P+LGL W+N
Sbjct: 294 ----DPKTPSLGLVWTN 306
>gi|315426193|dbj|BAJ47837.1| DNA repair protein RadA, partial [Candidatus Caldiarchaeum
subterraneum]
Length = 316
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 7 MLKLGFQEWE-VNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITE 65
+++ GF + E V + L+++KA Q ++TGS D++L GG+ ITE
Sbjct: 53 LIESGFLDKEFVPATEVLERRKAMQR-----------LTTGSRALDAMLGGGVETQAITE 101
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPK 121
L G G GKTQ+C +C+ Q+ + G+ +YI TE+ F R++Q+ E L K
Sbjct: 102 LIGEFGSGKTQVCHTLCVMAQLPREQGGLEGSAIYIDTEATFRPERISQIAEARGLDPQK 161
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
+ I Y L+ T++ ++E K +++IDSI FR + +R
Sbjct: 162 ILENIIFASVYNSSHLQLTVKELGRYVEKYKARLVIIDSIISHFRAEFIGRGTLAERQQR 221
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTSAMTH--SDKNIPALG 219
+ DL H L + H I V+ TNQV + D N P+ G
Sbjct: 222 LNDLLHRLLRTAQVHNIAVVLTNQVQANPDQFFGDPNKPSGG 263
>gi|343485007|dbj|BAJ50661.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
Length = 333
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 7 MLKLGFQEWE-VNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITE 65
+++ GF + E V + L+++KA Q ++TGS D++L GG+ ITE
Sbjct: 70 LIESGFLDKEFVPATEVLERRKAMQR-----------LTTGSRALDAMLGGGVETQAITE 118
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPK 121
L G G GKTQ+C +C+ Q+ + G+ +YI TE+ F R++Q+ E L K
Sbjct: 119 LIGEFGSGKTQVCHTLCVMAQLPREQGGLEGSAIYIDTEATFRPERISQIAEARGLDPQK 178
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
+ I Y L+ T++ ++E K +++IDSI FR + +R
Sbjct: 179 ILENIIFASVYNSSHLQLTVKELGRYVEKYKARLVIIDSIISHFRAEFIGRGTLAERQQR 238
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTSAMTH--SDKNIPALG 219
+ DL H L + H I V+ TNQV + D N P+ G
Sbjct: 239 LNDLLHRLLRTAQVHNIAVVLTNQVQANPDQFFGDPNKPSGG 280
>gi|19114539|ref|NP_593627.1| RecA family ATPase Rhp57 [Schizosaccharomyces pombe 972h-]
gi|20178063|sp|Q9UUL2.1|RAD57_SCHPO RecName: Full=DNA repair protein rhp57; AltName: Full=RAD57 homolog
gi|5821322|dbj|BAA83768.1| DNA repair protein Rhp57 [Schizosaccharomyces pombe]
gi|12038923|emb|CAC19737.1| RecA family ATPase Rhp57 [Schizosaccharomyces pombe]
Length = 354
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 60/268 (22%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKG 93
+T ++TG K D L GGI G +TE+ G SG GK+Q C+Q+CL +Q+ +K
Sbjct: 70 VTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKA 129
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKC----------SDKIFITHCYEFIDLKRTLES 143
++I TES T RL +L P PK D+++ C + + ++
Sbjct: 130 AVFISTESGLETKRLFELARYLPERYPKADKKDIIIKNPGDRVYTILCPDLESQEHIIQY 189
Query: 144 QSG--FIENKVGMIVIDSIAGIFRNTYAEDKY-------------VQRAHDMRDLAHYLH 188
Q F +K+G++++DS+A +R AE +Y +R + + LA L
Sbjct: 190 QLPILFNRDKIGLVILDSVASNYR---AELRYNRSKSHFRDLDNIAKRGNQLGKLAMTLR 246
Query: 189 ELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVIC 248
L+ +H V+ NQV+ + I L Y+ W
Sbjct: 247 TLAHQHEAAVVIANQVSDRIPRDYDAIGLFSLDYQ-----------------SQWF---- 285
Query: 249 TNQVTSAMTHSDKN--IPALGLSWSNLI 274
S +D N IP+LGL W+N I
Sbjct: 286 -----SGWDDTDPNPKIPSLGLVWTNNI 308
>gi|240278866|gb|EER42372.1| RecA family ATPase Rhp57 [Ajellomyces capsulatus H143]
gi|325090124|gb|EGC43434.1| RecA family ATPase Rhp57 [Ajellomyces capsulatus H88]
Length = 701
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
VST D +L GGI G +TEL+G SGCGKTQ L + LS+Q+ P+ + LY+ T
Sbjct: 173 VSTLDPVLDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYLST 232
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL E P+ P+ S + + + + LESQ + +
Sbjct: 233 ESNLPTNRLSQLLEEHPVISTLPEGSPRPSLENILSITTID--LESQDHILNYQIPVAVS 290
Query: 152 ---VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+G++VIDSI +R D + RA ++ L +L L+ K I ++ NQV+
Sbjct: 291 RYNIGLVVIDSITANYRAESDLDNVAGLLARAWQLKKLGQFLRNLAAKQNIAIVVANQVS 350
Query: 206 SAMTHSD 212
+ D
Sbjct: 351 DRIQMDD 357
>gi|225560118|gb|EEH08400.1| RecA family ATPase Rhp57 [Ajellomyces capsulatus G186AR]
Length = 655
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
VST D +L GGI G +TEL+G SGCGKTQ L + LS+Q+ P+ + LY+ T
Sbjct: 179 VSTLDPVLDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYLST 238
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL E P+ P+ S + + + + LESQ + +
Sbjct: 239 ESNLPTNRLSQLLEEHPVISTLPEGSPRPSLENILSITTID--LESQDHILNYQIPVAVS 296
Query: 152 ---VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+G++VIDSI +R D + RA ++ L +L L+ K I ++ NQV+
Sbjct: 297 RYNIGLVVIDSITANYRAESDLDNVAGLLARAWQLKKLGQFLRNLAAKQNIAIVVANQVS 356
Query: 206 SAMTHSD 212
+ D
Sbjct: 357 DRIQMDD 363
>gi|195501628|ref|XP_002097874.1| GE24233 [Drosophila yakuba]
gi|194183975|gb|EDW97586.1| GE24233 [Drosophila yakuba]
gi|209946338|gb|ACI97400.1| spindle B [Drosophila yakuba]
Length = 341
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 102/195 (52%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ A GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVARGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLDKGVAYIC 147
Query: 99 TESVFPTARLAQL---CELS-PLAKPKCSDKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ CE P + IF+ + E I+ L Q G
Sbjct: 148 TESAFPARRLLQMSKACERRHPQMQLNFLGNIFVENHVEAETLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR Y + Y++RA MR LA L + K+ V+C NQVTS
Sbjct: 207 ----IGLIIIDSVAAIFR-LYTD--YLERARHMRRLADALLSYADKYNCAVVCVNQVTS- 258
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 259 -RDGQDEIPCLGLQW 272
>gi|291225492|ref|XP_002732740.1| PREDICTED: RAD51 homolog c-like [Saccoglossus kowalevskii]
Length = 357
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 31/218 (14%)
Query: 48 EKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVF 103
E+ D+IL GG+ ITE GA G GKTQ+ +Q+ + +Q+ GV +YI TE F
Sbjct: 83 EELDTILGGGVPLAKITEFCGAPGIGKTQIGIQLAVDVQIPSVFGGVEGEAIYIDTEGSF 142
Query: 104 PTARLAQLC-----------ELSPLAKPKCSD--------KIFITHCYEFIDLKRTLESQ 144
R + E +P K +D KI++ C ++I+L T+
Sbjct: 143 MVHRAVDIAQATVSHCISSIENNPKLKEVLNDFTVNSILSKIYVYRCNDYIELIATVNLL 202
Query: 145 SGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
F+ +V +IV+DSIA FRN + D R + LA L ++ +H++ V+ TN
Sbjct: 203 PQFLTEHPRVKLIVLDSIAFHFRNNF--DDMALRTRLLNGLAQNLIRMASQHKLAVVLTN 260
Query: 203 QVTSAMTHSDKN----IPALGLTYERAHDMRDLAHYLH 236
Q+T+ + D+ +PALG ++ A +R + + H
Sbjct: 261 QMTTKIKSDDRGQSHVVPALGESWGHASTLRIVLFWQH 298
>gi|154288046|ref|XP_001544818.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408459|gb|EDN04000.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 587
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 19/187 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
VST D +L GGI G +TEL+G SGCGKTQ L + LS+Q+ P+ + LY+ T
Sbjct: 111 VSTLDPVLDRVLAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYLST 170
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL E P+ P+ S + + + + LESQ + +
Sbjct: 171 ESNLPTNRLSQLLEEHPVISTLPEGSPRPSLENILSITTID--LESQDHILNYQIPVAVS 228
Query: 152 ---VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+G++VIDSI +R D + RA ++ L +L L+ K I ++ NQV+
Sbjct: 229 RYNIGLVVIDSITANYRAESDLDNVAGLLARAWQLKKLGQFLRNLAAKQNIAIVVANQVS 288
Query: 206 SAMTHSD 212
+ D
Sbjct: 289 DRIQMDD 295
>gi|47213607|emb|CAG07273.1| unnamed protein product [Tetraodon nigroviridis]
Length = 329
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 106/216 (49%), Gaps = 35/216 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ T S + D+ L GG G +TE+ G G GKTQLCLQ+ + +QV G V+Y+
Sbjct: 83 IVTFSSQLDAALGGGAPVGRMTEVCGVPGVGKTQLCLQLAVDVQVPHCFGGLGAQVVYVD 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCS---------------------DKIFITHCYEFIDL 137
TE F RL +L +L+ A CS +F+ C+++++L
Sbjct: 143 TEGGF---RLQRLLDLAAAAVNHCSLLAEDQEQRVAMETFTVETILSNVFVVRCHDYLEL 199
Query: 138 KRTLESQSGFIENKVG--MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHR 195
L GF+ G ++V+DS+A FR D+ QR + LA L ++
Sbjct: 200 LAELHLMPGFLSAHPGVRLLVVDSVASPFRPLL--DELSQRTRLLSGLAQQLVAMAASRD 257
Query: 196 IVVICTNQVTSAM--THSDKNIPALGLTYERAHDMR 229
+ V+ TNQ+T+ + THS+ +PALG T+ A +R
Sbjct: 258 MAVVVTNQMTTRVWGTHSEV-VPALGDTWGHAAAIR 292
>gi|322710724|gb|EFZ02298.1| DNA repair protein (Rad57), putative [Metarhizium anisopliae ARSEF
23]
Length = 402
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 101/209 (48%), Gaps = 21/209 (10%)
Query: 13 QEWEVNKVKDLKKKKAFQVGK-NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASG 71
Q E N +D K A Q K NP + +ST + D+ L GI ITE++G SG
Sbjct: 90 QPSESNS-QDASKSPAIQPQKGNP--SSPSFISTLCPQIDAALNSGIPTSSITEITGESG 146
Query: 72 CGKTQLCLQMCLSLQVSQPH---KGVLYICTESVFPTARLAQLCELSPL------AKPKC 122
GKTQ L +CL++Q+ PH K LYI TES T RL+Q+ +PL A
Sbjct: 147 AGKTQFLLSLCLAVQLPPPHGLRKQALYISTESSLATKRLSQILASNPLLQDIDFADRPS 206
Query: 123 SDKIFITHCYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTY--AEDKY----V 174
D I T + LE Q + ++ +G++VIDS+A +R + A Y
Sbjct: 207 LDNILSTVTPDLESQDHILEYQVPVLLSRHNIGLLVIDSVAANYRAEFERAGSSYGSNMA 266
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
R+ ++ L L +L+ +H I V+ NQ
Sbjct: 267 ARSAELVRLGALLRDLARRHGIAVVVANQ 295
>gi|15242137|ref|NP_200554.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|30696870|ref|NP_851202.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|55583983|sp|Q9FKM5.1|XRCC3_ARATH RecName: Full=DNA repair protein XRCC3 homolog; AltName: Full=X-ray
repair cross-complementing protein 3 homolog;
Short=AtXRCC3
gi|9758307|dbj|BAB08781.1| unnamed protein product [Arabidopsis thaliana]
gi|15425729|dbj|BAB64342.1| AtXRCC3alpha [Arabidopsis thaliana]
gi|16444953|dbj|BAB70684.1| AtXRCC3beta [Arabidopsis thaliana]
gi|19571703|emb|CAD27641.1| Rad51B protein [Arabidopsis thaliana]
gi|19571705|emb|CAD27642.1| Rad51B protein [Arabidopsis thaliana]
gi|20384750|gb|AAK54457.1| DNA repair protein XRCC3 [Arabidopsis thaliana]
gi|109946499|gb|ABG48428.1| At5g57450 [Arabidopsis thaliana]
gi|332009520|gb|AED96903.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
gi|332009521|gb|AED96904.1| DNA repair protein XRCC3-like protein [Arabidopsis thaliana]
Length = 304
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 49/251 (19%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TG E D L+GGI +TE+ SGCGKTQLCLQ+ L Q+ H G+ LY+
Sbjct: 21 LTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYLH 80
Query: 99 TESVFPTARLAQLCELSPLAKPKC--------SDKIFITHCYEFIDLKRTLESQSGFIEN 150
+E FP RL QL + P D +F+ + + L + GF+ N
Sbjct: 81 SEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLFDIMPRIDGFVGN 140
Query: 151 K-----VGMIVIDSIAGIFRNTY--AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+ +IV+DS+A +FR+ + +R+ ++ L +L+ K + ++ TNQ
Sbjct: 141 SKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDLAIVITNQ 200
Query: 204 VTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNI 263
VT + SD GL+ R ++R YL+ + + +
Sbjct: 201 VTDLVETSD------GLSGLRIGNLR----YLY--------------------SSGRRVV 230
Query: 264 PALGLSWSNLI 274
P+LGL+W+N +
Sbjct: 231 PSLGLAWANCV 241
>gi|358396943|gb|EHK46318.1| hypothetical protein TRIATDRAFT_196126 [Trichoderma atroviride IMI
206040]
Length = 482
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST + D+ L GG+ G ITE +G SG GKTQ L +CL++Q+ PH K LYI T
Sbjct: 120 ISTLDDGLDAALGGGVPVGHITEFTGESGVGKTQFLLSLCLAVQLPPPHGLGKQALYIST 179
Query: 100 ESVFPTARLAQ-------LCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--EN 150
ES T RLAQ L E + P D I + LE Q + +
Sbjct: 180 ESGLTTRRLAQMLQGNTILREAAESGTPASLDGIHSAVTPDLETQDHILEYQVPVLLSRH 239
Query: 151 KVGMIVIDSIAGIFRNTYAE-----DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
++G+++IDS+A FR + R+ ++ L L +L+ +H I V+ NQV
Sbjct: 240 EIGILIIDSVAANFRAEFERQGSHGSNMATRSAELTRLGALLRDLARRHNIAVVVANQVA 299
Query: 206 SAMTHS 211
S
Sbjct: 300 DRFASS 305
>gi|326426805|gb|EGD72375.1| hypothetical protein PTSG_00395 [Salpingoeca sp. ATCC 50818]
Length = 335
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 30/210 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D + G I G + +L G S GKTQL LQ+CL++Q G+ ++I
Sbjct: 79 ISWGDAGLDRV--GPIRTGHLIDLCGESSAGKTQLALQLCLAVQQPPECGGISARAVFIN 136
Query: 99 TESVFPTARLAQLCE-----LSPLAKPKCSDKIF---ITHCYEFI----DLKRTLESQSG 146
TE+ FP +R QL + LA SD +F I EF + +L S SG
Sbjct: 137 TEARFPMSRWHQLAKHCAQRYPSLASIAVSDNVFTNRINTADEFWMFVHEALPSLLSSSG 196
Query: 147 FIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V ++VIDSIA +FR +A D+ RAH + D+ L +L+ H+ ++C NQV++
Sbjct: 197 -----VRLVVIDSIAALFRADFALDESAARAHVLFDIGRQLKQLAHAHKTAIVCINQVSA 251
Query: 207 AMTH-------SDKNIPALGLTYERAHDMR 229
+ + IPALGL + + R
Sbjct: 252 HVPEEVLPSFAPSRVIPALGLAWSSCINAR 281
>gi|432960262|ref|XP_004086436.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Oryzias
latipes]
Length = 292
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++T S + D LKGG+ G +TE+ GA G GKT LCLQ+ + +Q+ + G V+++
Sbjct: 35 ITTFSSQLDHALKGGLPVGKVTEICGAPGVGKTHLCLQLSVDIQIPRSFGGLEAQVIFMD 94
Query: 99 TESVFPTARLAQLCE------------------LSPLAKPKCSDKIFITHCYEFIDLKRT 140
TE F R+ + + IF+ C+++++L+
Sbjct: 95 TEGSFVLQRVVDIAAAVVRHFSLLAVDGEQKDTMQTFNMESILSNIFLVRCHDYVELQAE 154
Query: 141 LESQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
L F+ +K V ++VIDS+A FR D QR ++ LA + ++ +H I V
Sbjct: 155 LLLLPDFLRDKPRVRLLVIDSVAFPFRQHL--DDLSQRTRLLQGLAQQVISMATRHNIAV 212
Query: 199 ICTNQVTSAMTHSDKN-IPALGLTYERAHDMR 229
+ TNQ+T+ + S + +PALG + A R
Sbjct: 213 VITNQMTTRLQDSQSHLVPALGEIWGHASTTR 244
>gi|358378198|gb|EHK15880.1| hypothetical protein TRIVIDRAFT_227821 [Trichoderma virens Gv29-8]
Length = 467
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 35 PIDMT-EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH-- 91
PI T + +ST + D+ L GG+ G ITE +G SG GKTQ L +CL++Q+ P
Sbjct: 93 PISTTSDQFISTLDDGLDAALGGGVPVGHITEFTGESGVGKTQFLLSLCLAVQLPAPRGL 152
Query: 92 -KGVLYICTESVFPTARLAQ-------LCELSPLAKPKCSDKIFITHCYEFIDLKRTLES 143
K LYI TES T RLAQ L E S P D I + LE
Sbjct: 153 GKQALYISTESGLATRRLAQMLEGNTILQEASEAGTPASLDGIHSAVTPDLESQDHILEY 212
Query: 144 QSGFIENK--VGMIVIDSIAGIFRNTYAE-----DKYVQRAHDMRDLAHYLHELSIKHRI 196
Q + ++ +G+++IDS+A +R + R+ D+ L L +L+ +H I
Sbjct: 213 QVPVLLSRHDIGLMIIDSVAANYRAEFERQGSHGSNMATRSADLIRLGALLRDLARRHSI 272
Query: 197 VVICTNQVTSAM-THSDKNIP 216
+I NQV + S +IP
Sbjct: 273 AIIVANQVADRFASSSTPSIP 293
>gi|327349451|gb|EGE78308.1| DNA repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 590
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D L GGI G +TEL+G SGCGKTQ L + LS+Q+ P+ + LY T
Sbjct: 110 ISTLDPVLDQALAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYFST 169
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL E P+ P+ S + + + + LESQ + +
Sbjct: 170 ESDLPTGRLSQLLEEHPIISTLPEESPRPSLENILAITTID--LESQDHILNYQIPVAVS 227
Query: 152 ---VGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSIA +R ++ D + RA ++ L +L L+ I ++ NQV+
Sbjct: 228 RYNVGLVVIDSIAANYRAESDSDNVDGLLVRAWQLKKLGQFLRNLAANQNIAIVVANQVS 287
>gi|347832907|emb|CCD48604.1| hypothetical protein [Botryotinia fuckeliana]
Length = 523
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 19/237 (8%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGAS 70
G +E E N + + KK + GK +M E +ST + D L GGI AG ITE++G S
Sbjct: 116 GAEEDEKNVDGEGEVKKLRKSGKEVANMWE-AISTLDDDMDRALGGGIPAGYITEVTGES 174
Query: 71 GCGKTQLCLQMCLSLQVSQPH---KGVLYICTESVFPTARLAQLCELSPL----AKPKCS 123
G GKTQ L + LS Q+ PH LYI TES P RL+QL PL P
Sbjct: 175 GAGKTQFLLTLLLSAQLPAPHGLASPTLYISTESSLPITRLSQLLRTHPLLASHPSPPSL 234
Query: 124 DKIFITHCYEFIDLKRTLESQSGFIENKVG--MIVIDSIAGIFRNTYAED-------KYV 174
D++ + L Q + G ++++DS+A +R +
Sbjct: 235 DRVISISTPDLESQDHILRFQVPVAIKRHGIRLLILDSVAANYRAEFERPGVTKGGGNMA 294
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA-MTHSDKNIP-ALGLTYERAHDMR 229
QR+ ++ L L +L+ +H + ++ NQV + S + P A G ER DM+
Sbjct: 295 QRSAELVKLGQLLRDLAREHGVAIVVANQVADRFIGGSGRASPMAYGQKRERERDMQ 351
>gi|209879790|ref|XP_002141335.1| meiotic recombination protein DMC1-like protein [Cryptosporidium
muris RN66]
gi|209556941|gb|EEA06986.1| meiotic recombination protein DMC1-like protein, putative
[Cryptosporidium muris RN66]
Length = 342
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 11 GFQEWEVNKV----KDLKKKKAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+ + L++ +FQ G + + + ++TGSE+FD +L GG + IT
Sbjct: 67 GLSEAKVEKIVEAAQKLEQVSSFQTGTEVLAKRQNILRITTGSEQFDKMLLGGFESMCIT 126
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G + CGKTQ+C +C++ Q+ G V +I TE F R+A++ E L
Sbjct: 127 EIFGENRCGKTQICHTLCVTAQLPTEMSGANGKVCFIDTEGTFRPERIAKISERFGLQGD 186
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D I Y L + + + +G IE + ++++DSI +FR ++ + +R
Sbjct: 187 VTLDNILYARAYTHEHLNQLISAAAGKMIEERFALLIVDSIIALFRTEFSGRGELAERQQ 246
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTY 222
+ L++L+ + I V+ TN V + PA G+T+
Sbjct: 247 ILNKTLSKLNKLADQFNIAVVMTNHVMAD--------PAGGMTF 282
>gi|170290825|ref|YP_001737641.1| DNA repair and recombination protein RadA [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174905|gb|ACB07958.1| DNA repair and recombination protein RadA [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 336
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
++TGS+ D +L GG+ ITE+ G G GKTQ C QM +++Q+ + +G +YI
Sbjct: 104 ITTGSKALDELLGGGVETQSITEIYGPYGSGKTQFCHQMAVTVQLDEEKGGLGRGAMYID 163
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLESQSGFIENKVGM 154
TE F R+ Q+ E L I + + I +R ++S E +G+
Sbjct: 164 TEGTFRPERILQIAERFKLDPEHTLKNILYARAFTSDHQMIVTER---AESYIKERDIGL 220
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT--HS 211
I++DS+ FR Y + +R + H L L++ + + VI TNQV + T
Sbjct: 221 IIVDSLISHFRGEYVGRETLAERQQKLNKYLHKLLRLALGYNMAVIVTNQVVADPTAFFG 280
Query: 212 DKNIPALG 219
D N PA G
Sbjct: 281 DPNKPAGG 288
>gi|239608262|gb|EEQ85249.1| DNA repair protein [Ajellomyces dermatitidis ER-3]
Length = 652
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D L GGI G +TEL+G SGCGKTQ L + LS+Q+ P+ + LY T
Sbjct: 170 ISTLDPVLDQALAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYFST 229
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL E P+ P+ S + + + + LESQ + +
Sbjct: 230 ESDLPTGRLSQLLEEHPIISTLPEESPRPSLENILAITTID--LESQDHILNYQIPVAVS 287
Query: 152 ---VGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSIA +R ++ D + RA ++ L +L L+ I ++ NQV+
Sbjct: 288 RYNVGLVVIDSIAANYRAESDSDNVDGLLVRAWQLKKLGQFLRNLAANQNIAIVVANQVS 347
>gi|261203417|ref|XP_002628922.1| DNA repair protein [Ajellomyces dermatitidis SLH14081]
gi|239586707|gb|EEQ69350.1| DNA repair protein [Ajellomyces dermatitidis SLH14081]
Length = 591
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 19/180 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D L GGI G +TEL+G SGCGKTQ L + LS+Q+ P+ + LY T
Sbjct: 110 ISTLDPVLDQALAGGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPYGTSQKALYFST 169
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL E P+ P+ S + + + + LESQ + +
Sbjct: 170 ESDLPTGRLSQLLEEHPIISTLPEESPRPSLENILAITTID--LESQDHILNYQIPVAVS 227
Query: 152 ---VGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSIA +R ++ D + RA ++ L +L L+ I ++ NQV+
Sbjct: 228 RYNVGLVVIDSIAANYRAESDSDNVDGLLVRAWQLKKLGQFLRNLAANQNIAIVVANQVS 287
>gi|194900751|ref|XP_001979919.1| GG16853 [Drosophila erecta]
gi|190651622|gb|EDV48877.1| GG16853 [Drosophila erecta]
Length = 341
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 102/190 (53%), Gaps = 15/190 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ A GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVARGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYEFIDLKRTLESQSGFI--ENKV 152
TES FP RL Q+ + P+ IF+ + E L + ++ + ++ +
Sbjct: 148 TESAFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAETLLACVLNRIPRLMQQHGI 207
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
G+I+IDS+A IFR Y + Y++RA MR LA L + K+ V+C NQV S
Sbjct: 208 GLIIIDSVAAIFR-LYTD--YLERARHMRRLADALLSYADKYNCAVVCVNQVAS--RDGQ 262
Query: 213 KNIPALGLTY 222
IP LGL +
Sbjct: 263 DEIPCLGLQW 272
>gi|322696544|gb|EFY88335.1| DNA repair protein (Rad57), putative [Metarhizium acridum CQMa 102]
Length = 482
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 21/182 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST + D+ L GI ITE++G SG GKTQ L +CL++Q+ PH K LYI T
Sbjct: 127 ISTLCPQIDAALNSGIPTSSITEITGESGAGKTQFLLSLCLAVQLPPPHGLGKQALYIST 186
Query: 100 ESVFPTARLAQLCELSPLAKP-KCSDKIFITHCYEFIDLKRTLESQSGFIENKV------ 152
ES T RL+Q+ +PL + +D+ + + + LESQ +E +V
Sbjct: 187 ESSLATKRLSQILASNPLLQDIDFADRPSLDNILSAV--TPDLESQDHILEYQVPVLLSR 244
Query: 153 ---GMIVIDSIAGIFRNTY--AEDKY----VQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
G++VIDS+A +R + A Y R+ ++ L L +L+ +H I V+ NQ
Sbjct: 245 HNIGLLVIDSVAANYRAEFERAGSSYGSNMAARSAELVRLGALLRDLARRHDIAVVVANQ 304
Query: 204 VT 205
V+
Sbjct: 305 VS 306
>gi|195391578|ref|XP_002054437.1| GJ22809 [Drosophila virilis]
gi|194152523|gb|EDW67957.1| GJ22809 [Drosophila virilis]
Length = 349
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH-----KGVLYI 97
V+ G D GG+ GITE+ GASG GK+Q+ L P KGV +I
Sbjct: 88 VTFGCAALDQCTGGGVSIRGITEICGASGVGKSQV-LLQLSLSVQLPPRLGGLGKGVAFI 146
Query: 98 CTESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYEFIDLKRTLESQSGFI--ENK 151
CTE FP+ RL Q+ + P+ IFI H YE L + ++ + +
Sbjct: 147 CTEDAFPSRRLLQISKAFEARYPEEQLNFLGNIFIEHQYESQPLLECISNRLPQLLQAHS 206
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+G+I+IDS+A IFR Y + + +RA DMR + H L + K+ V+C+NQ+T+
Sbjct: 207 IGLIIIDSVAAIFR-LYTD--FEERARDMRRMVHALLSYADKYDCAVVCSNQMTATEKAD 263
Query: 212 DK---NIPALGLTY 222
K ++P LGL +
Sbjct: 264 QKTLEDVPCLGLQW 277
>gi|195110743|ref|XP_001999939.1| GI22807 [Drosophila mojavensis]
gi|193916533|gb|EDW15400.1| GI22807 [Drosophila mojavensis]
Length = 345
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 103/193 (53%), Gaps = 16/193 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
V+ G D GG+ GITE+ G SG GK+Q+ LQ+ LS+Q+ KGV +IC
Sbjct: 88 VTFGCAALDQCTGGGVSIRGITEICGNSGVGKSQVLLQLSLSVQLPATLGGLGKGVAFIC 147
Query: 99 TESVFPTARLAQLCEL----SPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKV 152
TE FP+ RL Q+ + P K IFI H YE L + ++ + E+ +
Sbjct: 148 TEDAFPSRRLLQISKAFEARYPAEKLNFLGNIFIEHQYESEPLLDCISNRLPQLLQEHSI 207
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
G+IVIDS+A IFR DK RA DMR + H L + K+ V+C+NQ+T+ +
Sbjct: 208 GLIVIDSVAAIFRLYTDFDK---RARDMRRMVHALLSYADKYDCAVVCSNQMTATEETGE 264
Query: 213 ---KNIPALGLTY 222
+++P LGL +
Sbjct: 265 TRMEDVPCLGLQW 277
>gi|424813601|ref|ZP_18238789.1| DNA repair and recombination protein RadA [Candidatus Nanosalina
sp. J07AB43]
gi|339758547|gb|EGQ43802.1| DNA repair and recombination protein RadA [Candidatus Nanosalina
sp. J07AB43]
Length = 316
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 15 WEVNKVKDLKKKKA--------------FQVGKNPIDMTEIV--VSTGSEKFDSILKGGI 58
E+ +V DL KKA F+ GK D E + + TG E+FD IL GG+
Sbjct: 38 GELAEVADLGDKKAQGIITESRKELDIGFESGKERYDQREEMKRIMTGCEEFDEILGGGV 97
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCEL 114
ITE+ G G KTQ+ Q+ ++Q+ + KG +Y+ TE F R+ Q+ E
Sbjct: 98 ETQAITEVYGEYGSAKTQISHQLATNVQLPRDEGGLGKGAVYVDTEDTFIPQRIEQMAEA 157
Query: 115 SPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTY-AED 171
+ + D I + + D + L ++ I N +G++V+DS+ FR+ Y
Sbjct: 158 NGQDPEEVLDDIHVARAFNS-DHQMLLADEAQEICQNNDIGLVVVDSLTAQFRSDYVGRG 216
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ QR + + L L+ H I V+ TNQV S
Sbjct: 217 ELAQRQQKLNKHMNTLLRLANAHNIAVLVTNQVMS 251
>gi|391329619|ref|XP_003739267.1| PREDICTED: DNA repair and recombination protein radA-like
[Metaseiulus occidentalis]
Length = 230
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 12/180 (6%)
Query: 49 KFDSILKGGIHAG-GITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTAR 107
+ D +L GGI G G+ E++G + GKTQL L + LS P K + YI TE FP R
Sbjct: 51 RLDDLLGGGISTGRGVIEVTGEASSGKTQLLLDIALSC----PRKAI-YINTEGRFPGER 105
Query: 108 LAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE-SQSGFIENK-VGMIVIDSIAGIFR 165
+AQ+ L + D + ++ E L T+E S ++NK V +++IDSI FR
Sbjct: 106 IAQMIRLRESWRNASLDNVLVSQISELDTLVLTIEHSLPEILKNKDVSVVLIDSITWPFR 165
Query: 166 NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERA 225
ED +R ++++ LH LS K+ + V+C N V + S P LG ++ +
Sbjct: 166 ---VEDGSRERTQTIQNVVRKLHALSKKYNVAVVCANHVADDL-QSRTTKPCLGQSWSKG 221
>gi|449466133|ref|XP_004150781.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
gi|449506730|ref|XP_004162832.1| PREDICTED: DNA repair protein XRCC3 homolog [Cucumis sativus]
Length = 294
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 50/246 (20%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTES 101
G D + GG+ +TE+ SGCGKTQLCLQ+ L Q+ + G+ LYI TE
Sbjct: 19 GCPIIDRSVGGGVACSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEF 78
Query: 102 VFPTARLAQLCELSPLAKPKC---SDKIFIT---HCYEFIDLKRTLESQSGFIENK---- 151
FP RL QL + + P+ SD IF+ ++ D+ +ES +EN+
Sbjct: 79 PFPFRRLQQLSQAFSSSYPQFSNPSDHIFVEPVHSAHQLFDIMPKIESS---LENRNSQL 135
Query: 152 -VGMIVIDSIAGIFRNTY--AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
+ +IVIDSIA +FR+ + +R+ ++ L L+ K+ + V+ TNQV M
Sbjct: 136 PIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKKYSLAVVLTNQVVDLM 195
Query: 209 THSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNIPALGL 268
SD GL R +++ +C+++ + PALGL
Sbjct: 196 GSSD------GLNALRIGNLK----------------FLCSSE--------RRVCPALGL 225
Query: 269 SWSNLI 274
+W+N +
Sbjct: 226 AWANCV 231
>gi|449018929|dbj|BAM82331.1| DNA repair protein RAD51 [Cyanidioschyzon merolae strain 10D]
Length = 347
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D++L+GGI G ITEL G GK+QLC +C++ Q+ G LY
Sbjct: 110 VFLTTGSKELDALLQGGIETGSITELFGEFRTGKSQLCHTLCVTCQMPVAEGGAEGKALY 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ Q+ E L D + Y L +G + E++ ++
Sbjct: 170 IDTEGTFRPERIVQIAERFQLDPQDVLDNVAFARAYNTDHQMELLMQAAGLMSESRYALV 229
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS---AMTHS 211
V+DS ++R Y+ + R M L L+ + + V+ TNQV + AM +
Sbjct: 230 VVDSATALYRTDYSGRGELAARQQHMARFLRALQRLADEFGVAVVITNQVVAKPDAMMFA 289
Query: 212 DKNIPALG 219
D +P G
Sbjct: 290 DPRVPIGG 297
>gi|154319083|ref|XP_001558859.1| hypothetical protein BC1G_02493 [Botryotinia fuckeliana B05.10]
Length = 485
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 26 KKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
KK + GK +M E +ST + D L GGI AG ITE++G SG GKTQ L + LS
Sbjct: 93 KKLRKSGKEVANMWE-AISTLDDDMDRALGGGIPAGYITEVTGESGAGKTQFLLTLLLSA 151
Query: 86 QVSQPH---KGVLYICTESVFPTARLAQLCELSPL----AKPKCSDKIFITHCYEFIDLK 138
Q+ PH LYI TES P RL+QL PL P D++ +
Sbjct: 152 QLPAPHGLASPTLYISTESSLPITRLSQLLRTHPLLASHPSPPSLDRVISISTPDLESQD 211
Query: 139 RTLESQSGFIENKVG--MIVIDSIAGIFRN-------TYAEDKYVQRAHDMRDLAHYLHE 189
L Q + G ++++DS+A +R T QR+ ++ L L +
Sbjct: 212 HILRFQVPVAIKRHGIRLLILDSVAANYRAEFERPGVTKGGGNMAQRSAELVKLGQLLRD 271
Query: 190 LSIKHRIVVICTNQVTSA-MTHSDKNIP-ALGLTYERAHDMR 229
L+ +H + ++ NQV + S + P A G ER DM+
Sbjct: 272 LAREHGVAIVVANQVADRFIGGSGRASPMAYGQKRERERDMQ 313
>gi|296827198|ref|XP_002851132.1| DNA repair protein RAD57 [Arthroderma otae CBS 113480]
gi|238838686|gb|EEQ28348.1| DNA repair protein RAD57 [Arthroderma otae CBS 113480]
Length = 604
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 23 LKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
+ + + F+V + P+ +ST DS L GGI G +TE++G SG GKTQ L +
Sbjct: 102 VAEDETFRVPRPPLLRR---ISTLDPILDSALAGGISTGYLTEVTGESGAGKTQFLLHLL 158
Query: 83 LSLQVSQPH---KGVLYICTESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCY 132
LS+Q+ PH K LYI TES T RL+QL L P D +F
Sbjct: 159 LSVQLPAPHGLSKNALYISTESDLATNRLSQLLNEHTVLQSLHPDIPRPSLDNVFSVTTV 218
Query: 133 EFIDLKRTLESQSGFIENKV---------GMIVIDSIAGIFR---NTYAEDKYVQRAHDM 180
+ LE+Q I +V G++VIDSI +R +T + ++R+ +
Sbjct: 219 D-------LETQEHIINYQVPVAISRFDIGLVVIDSITANYRAESSTESVSGLLERSWQL 271
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTSAM 208
+ L H+L L+++H I ++ NQ++
Sbjct: 272 KKLGHFLRALAVRHSIAIVVANQISDGF 299
>gi|156062294|ref|XP_001597069.1| hypothetical protein SS1G_01263 [Sclerotinia sclerotiorum 1980]
gi|154696599|gb|EDN96337.1| hypothetical protein SS1G_01263 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 493
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 32 GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH 91
GK+ +D E V+ST + D L GGI G ITE++G SG GKTQ L + LS Q+ P+
Sbjct: 99 GKDVVDKWE-VISTLDDDMDRALGGGIPTGYITEITGESGAGKTQFLLTLLLSAQLPAPY 157
Query: 92 ---KGVLYICTESVFPTARLAQLCELSPL----AKPKCSDKI--FITHCYEFIDLKRTLE 142
LYI TES PT RL+Q+ PL P DKI +T E D +
Sbjct: 158 GLTAPTLYISTESSLPTTRLSQILRTHPLLASHPSPPSLDKIISIVTPDLESQDHILRFQ 217
Query: 143 SQSGFIENKVGMIVIDSIAGIFRNTYAED-------KYVQRAHDMRDLAHYLHELSIKHR 195
+ + ++++DS+A +R + QR+ ++ L L +L+ +
Sbjct: 218 VPVAIKRHGIRLLILDSVAANYRAEFERPGMTKGGGNMAQRSAELVKLGQLLRDLAREFG 277
Query: 196 IVVICTNQVTSAMTHSDKNIPALGLTYERAHDMR 229
+ ++ NQV T L R DMR
Sbjct: 278 VAIVVANQVADRFTGGGGKASPLVYGQRRERDMR 311
>gi|66810419|ref|XP_638929.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
gi|60467564|gb|EAL65585.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
Length = 564
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 38/214 (17%)
Query: 36 IDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV- 94
+ ++ I +STG + D L GGI GITE++G SG GKTQLC+Q+ L +Q+ G+
Sbjct: 160 LQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQLPFEMGGLN 219
Query: 95 ---LYICTESVFPTARLAQLCEL----------------------------SPLAKPKCS 123
LYI TE FPT RL Q+ + S L+ S
Sbjct: 220 GACLYITTEPPFPTKRLNQMYTVKSGKNTNNNTNNNNNNNNGQQQQQQQYYSKLSNSGVS 279
Query: 124 --DKIFITHCYEFIDLKRTLESQ-SGFIENK-VGMIVIDSIAGIFRNTYAEDK--YVQRA 177
D IFI L L +Q +G++E K + +++IDSIA + R+ Y +K +++
Sbjct: 280 PLDNIFIQSTTTIDSLMDLLINQITGYLEKKTIRLLIIDSIAALLRHEYGNEKSEIIEKT 339
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+ LA+ L ++ ++ I ++ NQVT S
Sbjct: 340 KLLWSLANRLKLINEQYGITIVVVNQVTDFFIDS 373
>gi|209946348|gb|ACI97405.1| spindle B [Drosophila simulans]
Length = 341
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GGI GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGIVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|356567224|ref|XP_003551821.1| PREDICTED: DNA repair protein XRCC3 homolog [Glycine max]
Length = 288
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 17/191 (8%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTES 101
G D L GG+ +TE G SGCGKTQLCLQ+ LS Q+ H G+ ++I TE
Sbjct: 19 GCPVLDRCLAGGVPCASVTEFVGESGCGKTQLCLQLALSAQLPPSHGGLSASSIFIHTEF 78
Query: 102 VFPTARLAQLCELSPLAKP--KCS---DKIFIT---HCYEFIDLKRTLES---QSGFIEN 150
FP RL L + P CS D++F+ +E ++L T+E+ S
Sbjct: 79 PFPFRRLRHLSRAFRASHPDLPCSDPCDRVFLRAVHSAHELLNLIPTIETFLLHSKSPWR 138
Query: 151 KVGMIVIDSIAGIFRNTYAE--DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
V +IVIDSIA +FR+ + +R+ ++ L +L+ + I V+ TNQV +
Sbjct: 139 PVRIIVIDSIAALFRSDFENTGSDLRRRSSLFFGISGGLRQLAKRFGIAVVVTNQVVDLI 198
Query: 209 THSDKNIPALG 219
D + +LG
Sbjct: 199 GDGDVSFGSLG 209
>gi|225683324|gb|EEH21608.1| DNA repair protein Rhp57 [Paracoccidioides brasiliensis Pb03]
Length = 592
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D+ L GGI G ITE +G SG GKTQ L + LS+Q+ P+ + LY T
Sbjct: 110 ISTLDPVLDAALAGGISTGYITEFAGESGSGKTQFLLHLLLSVQLPPPYGTSRKALYFST 169
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL + PL P+ S + + + + LE+Q + +
Sbjct: 170 ESDLPTGRLSQLLDEHPLLSTLPEASARPSLENILSITTID--LETQDHILNYQIPVAVS 227
Query: 152 ---VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+G++VIDSI +R D + RA ++ L +L L+ K I ++ NQV+
Sbjct: 228 RYNIGLVVIDSITANYRAESDSDNVPGLLARAWQLKKLGRFLRNLAAKENIAIVVANQVS 287
Query: 206 SAMTHSD 212
+ D
Sbjct: 288 DQIQMDD 294
>gi|226286929|gb|EEH42442.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 592
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D+ L GGI G ITE +G SG GKTQ L + LS+Q+ P+ + LY T
Sbjct: 110 ISTLDPVLDAALAGGISTGYITEFAGESGSGKTQFLLHLLLSVQLPPPYGTSRKALYFST 169
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
ES PT RL+QL + PL P+ S + + + + LE+Q + +
Sbjct: 170 ESDLPTGRLSQLLDEHPLLSTLPEASARPSLENILSITTID--LETQDHILNYQIPVAVS 227
Query: 152 ---VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+G++VIDSI +R D + RA ++ L +L L+ K I ++ NQV+
Sbjct: 228 RYNIGLVVIDSITANYRAESDSDNVPGLLARAWQLKKLGRFLRNLAAKENIAIVVANQVS 287
Query: 206 SAMTHSD 212
+ D
Sbjct: 288 DQIQMDD 294
>gi|195570925|ref|XP_002103454.1| GD18959 [Drosophila simulans]
gi|194199381|gb|EDX12957.1| GD18959 [Drosophila simulans]
gi|209946350|gb|ACI97406.1| spindle B [Drosophila simulans]
gi|209946352|gb|ACI97407.1| spindle B [Drosophila simulans]
Length = 341
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|353238085|emb|CCA70042.1| related to RAD57 protein [Piriformospora indica DSM 11827]
Length = 525
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 25/196 (12%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK----GVLYICT 99
+TG +K D L+GGI G +TE++G S GKTQL LQ+ L Q+ + GV Y T
Sbjct: 78 TTGDDKLDKALRGGIRMGALTEIAGESASGKTQLALQLALMAQLPGAERGVDSGVAYFTT 137
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDKI-------FITHCYEFID-LKRTLESQSGFIEN- 150
S P RL +L + PL + K + + + I LK L + G E+
Sbjct: 138 TSALPVRRLTELAKSHPLLRQKDAKSLTDNVHTCLTSTVPALISVLKHALSALIGQAEDS 197
Query: 151 ----KVGMIVIDSIAGIFRNTYAEDK-----YVQRAHDMRDLAHYLHELSIKHRIVVICT 201
+ ++++DS+ +F ++ DK V+R+ + D+A+ LH+L+ + + +I
Sbjct: 198 EKLRPIRVLILDSLGTLF---HSMDKTTTVTLVERSKVLGDIAYMLHDLASRRNMAIIIV 254
Query: 202 NQVTSAMTHSDKNIPA 217
NQ + + SD P+
Sbjct: 255 NQASDVFSTSDDVSPS 270
>gi|209946340|gb|ACI97401.1| spindle B [Drosophila simulans]
Length = 341
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|145350889|ref|XP_001419827.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580059|gb|ABO98120.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 48 EKFDSILKGGIHAGGITELSGASGCGKTQLCL----QMCLSLQVSQPHKGVLYICTESVF 103
E D L GG+ G +TE+ GA+G GKTQLCL +V GV+Y+ E F
Sbjct: 85 EDVDKALGGGLRVGAVTEVVGAAGAGKTQLCLAACASAAAPARVGGRDGGVIYVDAERKF 144
Query: 104 PTARLAQLC-ELSPLAKP------KCSDKIFITHCYEFIDLKRTLES-QSGFIENKVGMI 155
ARLA++ E P A + ++ + DL + L++ + I++KV ++
Sbjct: 145 SGARLAEIAREKFPGAFEDEESVHALARRVHVVTPTSLTDLNKRLDALEEAIIDHKVRLV 204
Query: 156 VIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSIA + R + +K VQR + +A L + KH + V+ NQVT+
Sbjct: 205 IIDSIAHLARAEFGREKVVQRQSALGAVASTLKRHAEKHALAVLAVNQVTT 255
>gi|195329020|ref|XP_002031209.1| GM24163 [Drosophila sechellia]
gi|194120152|gb|EDW42195.1| GM24163 [Drosophila sechellia]
Length = 341
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPQMELNFLGSIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|209946342|gb|ACI97402.1| spindle B [Drosophila simulans]
Length = 341
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 98/195 (50%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNDYLERARHMRRLADALLSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|281201100|gb|EFA75314.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
PN500]
Length = 993
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 26/194 (13%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKG 93
+++I +STGS D L+GGI GITE+ G SGCGKTQL +Q+C+ Q+ G
Sbjct: 600 ISKIRLSTGSNVLDRHLQGGIMPSGITEIVGESGCGKTQLAIQLCIQAQLPFSLGGMEGG 659
Query: 94 VLYICTESVFPTARLAQLC-ELSPLAKP-----------------KCSDKIFITHCYEFI 135
+YI TES FP RL+Q+ + P+ + + D I I
Sbjct: 660 AVYIVTESNFPHKRLSQMIGKRRPIIEKLLQRNSENNNSSNSLNIQFEDNIIIHKVPTAQ 719
Query: 136 DLKRTLESQSG--FIENKVGMIVIDSIAGIFRNTYAEDK--YVQRAHDMRDLAHYLHELS 191
L L Q + + ++V+DSIA + R+ + + ++R + + ++++ L +S
Sbjct: 720 QLLTVLTQQFAELIFKRTIRLLVVDSIAALVRSEFGTESKDLIERTNLLWEISNQLKLIS 779
Query: 192 IKHRIVVICTNQVT 205
+H I V+ NQVT
Sbjct: 780 EEHGITVVVINQVT 793
>gi|67606014|ref|XP_666724.1| meiotic recombination protein DMC1-like protein [Cryptosporidium
hominis TU502]
gi|54657771|gb|EAL36494.1| meiotic recombination protein DMC1-like protein [Cryptosporidium
hominis]
Length = 342
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 11 GFQEWEVNKV----KDLKKKKAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+ + L + +FQ G + + + ++TGSE+FD +L GG + IT
Sbjct: 67 GLSEAKVEKIVEAAQKLDQSSSFQSGSEVMSRRQNILRITTGSEQFDKMLMGGFESMCIT 126
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G + CGKTQ+C +C++ Q+ G V +I TE F R+ ++ E +
Sbjct: 127 EIFGENRCGKTQICHTLCVAAQLPLEMNGGNGKVCFIDTEGTFRPERIVKIAERFGVQGD 186
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D I Y L + + + +G IE K ++++DSI +FR ++ + +R
Sbjct: 187 VALDNIMYARAYTHEHLNQLISAAAGKMIEEKFALLIVDSIIALFRTEFSGRGELAERQQ 246
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTY 222
+ L++L+ + I ++ TN V + PA G+++
Sbjct: 247 ILNKTLSKLNKLADQFNIAIVMTNHVMAD--------PAGGMSF 282
>gi|66362764|ref|XP_628348.1| meiotic recombination protein DMC1-like protein [Cryptosporidium
parvum Iowa II]
gi|46229395|gb|EAK90213.1| meiotic recombination protein DMC1-like protein [Cryptosporidium
parvum Iowa II]
Length = 342
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 20/224 (8%)
Query: 11 GFQEWEVNKV----KDLKKKKAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+ + L + +FQ G + + + ++TGSE+FD +L GG + IT
Sbjct: 67 GLSEAKVEKIVEAAQKLDQSSSFQSGSEVMSRRQNILRITTGSEQFDKMLMGGFESMCIT 126
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G + CGKTQ+C +C++ Q+ G V +I TE F R+ ++ E +
Sbjct: 127 EIFGENRCGKTQICHTLCVAAQLPLEMNGGNGKVCFIDTEGTFRPERIVKIAERFGVQGD 186
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D I Y L + + + +G IE K ++++DSI +FR ++ + +R
Sbjct: 187 VALDNIMYARAYTHEHLNQLISAAAGKMIEEKFALLIVDSIIALFRTEFSGRGELAERQQ 246
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTY 222
+ L++L+ + I ++ TN V + PA G+++
Sbjct: 247 ILNKTLSKLNKLADQFNIAIVMTNHVMAD--------PAGGMSF 282
>gi|301098091|ref|XP_002898139.1| DNA repair protein RAD51 [Phytophthora infestans T30-4]
gi|262105500|gb|EEY63552.1| DNA repair protein RAD51 [Phytophthora infestans T30-4]
Length = 338
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS D +LKGGI G ITE+ G GKTQLC Q+C++ Q+ G LY
Sbjct: 100 ITLSTGSNAVDELLKGGIETGSITEMFGEFRTGKTQLCHQLCVTCQLPVDRGGGEGKALY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L D + Y ++ +++ + E++ ++
Sbjct: 160 IDTEGTFRPQRLQAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLIQASAMMAESRFALV 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS +FR Y+ + R ++ L ++ + + V+ TNQ+T+
Sbjct: 220 IVDSATALFRTDYSGRGELAARQQELAKFLRALTRMADEFGVAVVITNQMTA 271
>gi|224142257|ref|XP_002324475.1| predicted protein [Populus trichocarpa]
gi|222865909|gb|EEF03040.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 111/253 (43%), Gaps = 56/253 (22%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
S G D + GGI ITE+ SG GKTQLCLQ+ L Q+ G+ LY+ T
Sbjct: 13 SLGCPILDCCMGGGIPCNSITEIVAESGSGKTQLCLQLSLRAQLPPFLGGLSASSLYLYT 72
Query: 100 ESVFPTARLAQLCELSPLAKPKC-------SDKIF---ITHCYEFIDLKRTLESQSGFIE 149
E FPT RL QL P+ D IF + + +D+ +ES F+E
Sbjct: 73 EFPFPTRRLHQLSSALQCQYPQIFVSNYDPCDSIFLQSVNTADQLLDIMPQVES---FLE 129
Query: 150 N-----KVGMIVIDSIAGIFRNTY--AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
N V +IVIDS+A +FR + ++R+ ++ L E + + +VV+ TN
Sbjct: 130 NSKTRLPVRVIVIDSMAALFRAEFENTASDLIRRSSLFFKISGKLKEFAKRFNLVVLVTN 189
Query: 203 QVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN 262
QV D+ D L+E+ I + S M S +
Sbjct: 190 QVM---------------------DVVDSGEGLNEVRIGNL----------SGMYSSGRR 218
Query: 263 I-PALGLSWSNLI 274
+ PALGLSW+N +
Sbjct: 219 VCPALGLSWANCV 231
>gi|119184014|ref|XP_001242973.1| hypothetical protein CIMG_06869 [Coccidioides immitis RS]
gi|392865876|gb|EAS31720.2| hypothetical protein CIMG_06869 [Coccidioides immitis RS]
Length = 591
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D +L GGI G +TE++G SG GKTQL L + LS+Q+ P+ K LYI T
Sbjct: 108 ISTLDPLLDDVLSGGILTGYVTEIAGESGSGKTQLLLHLLLSVQLPPPYGLRKNALYIST 167
Query: 100 ESVFPTARLAQLCELSPL--------AKPKCSDKIFITHC-YEFIDLKRTLESQSGFIEN 150
E+ T RL+QL + PL +P + + IT E D +
Sbjct: 168 EADLATNRLSQLLDGHPLLISLPEDVQRPSLDNVLSITTVDLETQDHILNYHVPAAISRY 227
Query: 151 KVGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
VG++VIDSI +R + + + RA +++ L L L++ H I V+ NQ++
Sbjct: 228 NVGLVVIDSITANYRVESSTNNVCGLLDRAWELKRLGQLLRNLAVTHNIAVVVANQISDR 287
Query: 208 MTHSDKNI 215
++H D ++
Sbjct: 288 LSHLDGSV 295
>gi|330040667|ref|XP_003239988.1| DNA repair protein Rad51 [Cryptomonas paramecium]
gi|327206914|gb|AEA39090.1| DNA repair protein Rad51 [Cryptomonas paramecium]
Length = 331
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 6/182 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D ILKGGI G ITEL G GKTQ+C +C++ Q+S G VLY
Sbjct: 92 IHLTTGSREIDRILKGGIETGSITELFGEFRTGKTQICHTLCVTCQLSIDQGGGEGRVLY 151
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ + L + D I Y L G + EN+ M+
Sbjct: 152 IDTEGTFRPERIVAIANRFNLNQQDVLDNIAFARAYNTDHQTELLNQACGMMAENRYAML 211
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKN 214
++DS ++R Y + R M L L+ + I ++ TNQV + +
Sbjct: 212 IVDSATALYRTDYTGRGELAPRQQHMAKFLRRLQRLADEFGIAIVITNQVIAKVEGGVYC 271
Query: 215 IP 216
IP
Sbjct: 272 IP 273
>gi|125772735|ref|XP_001357643.1| GA20711 [Drosophila pseudoobscura pseudoobscura]
gi|195159258|ref|XP_002020499.1| GL13479 [Drosophila persimilis]
gi|54637375|gb|EAL26777.1| GA20711 [Drosophila pseudoobscura pseudoobscura]
gi|194117268|gb|EDW39311.1| GL13479 [Drosophila persimilis]
gi|225581186|gb|ACN94754.1| GA20711 [Drosophila miranda]
Length = 335
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
++++TGS++ D +L GGI G ITE+ G CGKTQ+C + ++ Q+ KG LY
Sbjct: 93 VMLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQKGGEGKCLY 152
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TES F T RL+ + + L + + D + Y + L+ +G + E + +
Sbjct: 153 IDTESTFRTERLSAIAQRFKLNESEVLDNVSCARAYNSDQQTKLLQMAAGMLFETRYAAV 212
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS+ ++R+ Y + R + + L L+ + + V+ TNQVT+ +
Sbjct: 213 IVDSVMALYRSDYIGRGELAARQNHLGLCMRQLQRLADEFGVAVVITNQVTAQL 266
>gi|425767533|gb|EKV06102.1| DNA repair protein (Rad57), putative [Penicillium digitatum PHI26]
gi|425780447|gb|EKV18454.1| DNA repair protein (Rad57), putative [Penicillium digitatum Pd1]
Length = 529
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP---HKGVLYIC 98
+ST D++L GGI G +TE++G SG GKTQ L +CL++Q+ +P + +YI
Sbjct: 105 TISTLDPAMDALLGGGIPTGYVTEVTGESGSGKTQFLLSLCLAVQLPKPQGLQRRAMYIS 164
Query: 99 TESVFPTARLAQLCELSPL-------AKPKCSDKIFITHC-YEFIDLKRTLESQSGFIEN 150
TE T RL+QL E P+ P D + I E D
Sbjct: 165 TEHPLSTPRLSQLLECHPVLSTLPAEQAPSLEDILTINAMDLETQDHILNFHVPVAVERY 224
Query: 151 KVGMIVIDSIAGIFRNTYAE---DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+++IDSI +R +A +R+ + L H L L++K + ++ NQV+
Sbjct: 225 NIGLVIIDSITSNYRAEHASHSLQALAKRSSQLAKLGHLLRNLAVKEDVAIVLANQVSDR 284
Query: 208 MTHSDKNIPA 217
+ PA
Sbjct: 285 FESIQNSEPA 294
>gi|442535548|gb|AGC52847.1| XRCC3, partial [Hypsibius dujardini]
Length = 374
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 35/222 (15%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++ G D + +GGI +TE +GA+G KTQ CL + L Q+ G VLY
Sbjct: 109 IRLTFGCPLLDKLFRGGIVVDHLTEFAGAAGTAKTQTCLFLALRAQLPVLSGGLGGEVLY 168
Query: 97 ICTESVFPTARLAQLCE--LSPLAKPKCS-----DKIFITHCYEFIDLKRTLESQSGFIE 149
+CTE+V P RL Q+ + + L K D+IFI + +++ L SG +
Sbjct: 169 LCTETV-PIRRLRQMTDEMVRNLTAAKSEVTPSMDRIFIENLVTLDEVEHFL---SGRVH 224
Query: 150 N-----KVGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICT 201
+ + ++++DS+A +FR Y E++ V +R+ ++ + L L K+ + +ICT
Sbjct: 225 DLLTRLPIKLVIVDSMASVFR--YQEEEKVNSMERSARLQRMTVILRRLQAKYNVALICT 282
Query: 202 NQVTSAMTHS----------DKNIPALGLTYERAHDMRDLAH 233
NQ T+ + + D+ PALGL++ R + H
Sbjct: 283 NQATTMIDDAASSDTLGDGVDRTAPALGLSWSNFVTTRVMLH 324
>gi|348540387|ref|XP_003457669.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Oreochromis
niloticus]
Length = 358
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 33/220 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ T S + D L GGI G ITE+ G G GKTQLCLQ+ + +QV Q G V++I
Sbjct: 85 IVTFSSQLDESLGGGIPVGKITEVCGVPGIGKTQLCLQLAVDVQVPQCFGGVEGQVMFID 144
Query: 99 TESVFPTARLAQLCELSPLAKPKCS---------------------DKIFITHCYEFIDL 137
TE F L ++ +++ A CS IF+ C++ ++L
Sbjct: 145 TEGSF---LLQRVTDIAAAAVRHCSLLAEDDEQRAATETFTVETVLSNIFLVRCHDHVEL 201
Query: 138 KRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHR 195
L F+ K+ ++VIDS+A FR + D+ QR + + L ++I +
Sbjct: 202 LAELHLLPDFLSQHPKIRLLVIDSVAFPFRLLF--DELSQRTRLLNGVGQQLITMAINYN 259
Query: 196 IVVICTNQVTSAMTHSDKNI-PALGLTYERAHDMRDLAHY 234
I V+ TNQ+T+ + +I PALG + A +R L +
Sbjct: 260 ISVVITNQMTTRIRDGQSHIVPALGECWGHAPTIRLLLQW 299
>gi|66822135|ref|XP_644422.1| hypothetical protein DDB_G0273611 [Dictyostelium discoideum AX4]
gi|66822947|ref|XP_644828.1| hypothetical protein DDB_G0273139 [Dictyostelium discoideum AX4]
gi|60472545|gb|EAL70496.1| hypothetical protein DDB_G0273611 [Dictyostelium discoideum AX4]
gi|60472838|gb|EAL70787.1| hypothetical protein DDB_G0273139 [Dictyostelium discoideum AX4]
Length = 351
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E + +K+ KK F + D+ + I ++TGS++FDS+L GGI +G ITE
Sbjct: 75 GISEQKADKLLAEAKKLVFMGFRTATDINKARAEIIQITTGSKEFDSLLDGGIESGSITE 134
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQ+C +C++ Q+ G LYI TE F RL + E L
Sbjct: 135 IFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRALYIDTEGTFRPERLLAIAERYNLNGEH 194
Query: 122 CSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHD 179
D + Y L+ +++ + E++ ++++DS ++R YA + R
Sbjct: 195 VLDNVSYARAYNSDHQLELLVQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQKH 254
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTSAM 208
+ L L+ + + V+ TNQV +++
Sbjct: 255 LARFLRTLQRLADEFGVAVVITNQVVASV 283
>gi|303320159|ref|XP_003070079.1| hypothetical protein CPC735_032700 [Coccidioides posadasii C735
delta SOWgp]
gi|240109765|gb|EER27934.1| hypothetical protein CPC735_032700 [Coccidioides posadasii C735
delta SOWgp]
gi|320031918|gb|EFW13875.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 591
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D +L GGI G +TE++G SG GKTQL L + LS+Q+ P+ K LYI T
Sbjct: 108 ISTLDPLLDDVLSGGILTGYVTEIAGESGSGKTQLLLHLLLSVQLPPPYGLRKNALYIST 167
Query: 100 ESVFPTARLAQLCELSPL--------AKPKCSDKIFITHC-YEFIDLKRTLESQSGFIEN 150
E+ T RL+QL + PL +P + + IT E D +
Sbjct: 168 EADLATNRLSQLLDGHPLLISLPEDVQRPSLDNVLSITTVDLETQDHILNYHVPAAISRY 227
Query: 151 KVGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
VG++VIDSI +R + + + RA +++ L L L++ H I V+ NQ++
Sbjct: 228 NVGLVVIDSITANYRVESSINNVCGLLDRAWELKRLGQLLRNLAVTHNIAVVVANQISDR 287
Query: 208 MTHSDKNI 215
++H D ++
Sbjct: 288 LSHLDGSV 295
>gi|46107922|ref|XP_381020.1| hypothetical protein FG00844.1 [Gibberella zeae PH-1]
Length = 445
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 20/171 (11%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
V+ST + D+IL GG+ G +TE +G SG GKTQ L +CL++Q+ PH + LYI
Sbjct: 88 VISTLDDGLDAILGGGVPVGAVTEFTGESGAGKTQALLSLCLAVQLPSPHGLGREALYIS 147
Query: 99 TESVFPTARLAQLCELSPLAKP-KCSDKIFITHCYEFIDLKRTLESQSGFIE-------- 149
TE+ T+RLAQ+ + +P+ + D+ + + I LE+Q ++
Sbjct: 148 TEATMATSRLAQMLKSNPIIQQYDVDDRPSLDAIHSTI--TPDLETQDHILDFQVPVLLS 205
Query: 150 -NKVGMIVIDSIAGIFRNTYAE-----DKYVQRAHDMRDLAHYLHELSIKH 194
+++G+I++DS+A +R + R+ ++ L L +L+ +H
Sbjct: 206 RHRIGLIILDSVAANYRAEFERQGTHGSNMAARSAELVRLGALLRDLARRH 256
>gi|195505060|ref|XP_002099346.1| GE23416 [Drosophila yakuba]
gi|194185447|gb|EDW99058.1| GE23416 [Drosophila yakuba]
Length = 335
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 96 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 155
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 156 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 215
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 216 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 269
>gi|195574987|ref|XP_002105464.1| GD17366 [Drosophila simulans]
gi|194201391|gb|EDX14967.1| GD17366 [Drosophila simulans]
Length = 336
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 97 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 217 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 270
>gi|195341431|ref|XP_002037313.1| GM12184 [Drosophila sechellia]
gi|194131429|gb|EDW53472.1| GM12184 [Drosophila sechellia]
Length = 336
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 97 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 217 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 270
>gi|123402061|ref|XP_001301981.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121883224|gb|EAX89051.1| hypothetical protein TVAG_144570 [Trichomonas vaginalis G3]
Length = 328
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLA 109
D+++K I GI E +G +GCGK+ + + ++ +S P + V+ I TE PT RL
Sbjct: 86 LDNLIK--IPKNGIIEFTGPAGCGKSNIIYHLLINQIISDPERRVVLISTEGHVPTQRLH 143
Query: 110 QLCELSPLAKPKCSDKIFITHCYEFIDLKR----TLESQSGFIENKVGMIVIDSIAGIFR 165
++ E+ L + I I E ++ + TL ++ IDSIA +FR
Sbjct: 144 KIAEMRGLDPEEVLSMILIKEATEVVEFNQIINVTLPQLFSTCVPPPSIVAIDSIAALFR 203
Query: 166 NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH--SDKNIPALGLTYE 223
+ + + QRA + D++ L +S + ++ TNQVT+ M + + +P+LGL +
Sbjct: 204 SEFDMNAAKQRAQMLFDMSTILKWISASYNCLIFTTNQVTANMGPFTTQEWVPSLGLAWS 263
Query: 224 RAHDMR 229
+MR
Sbjct: 264 NCVNMR 269
>gi|255937411|ref|XP_002559732.1| Pc13g13180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584352|emb|CAP92387.1| Pc13g13180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 523
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP---HKGVLYIC 98
+ST D++L GGI G +TE++G SG GKTQ L +CL++Q+ +P + +YI
Sbjct: 105 TISTLDPAMDALLGGGIPTGYVTEVTGESGSGKTQFLLSLCLAVQLPKPQGLQRRAIYIS 164
Query: 99 TESVFPTARLAQLCELSPL-------AKPKCSDKIFITHCYEFIDLKRTLESQSGFI--- 148
TE T RL+Q+ E P+ P D + I LESQ +
Sbjct: 165 TEHSLSTPRLSQILECHPVLSTLPAEQTPSLQDILSINAM--------DLESQDHILNYH 216
Query: 149 ------ENKVGMIVIDSIAGIFRNTYAEDKY---VQRAHDMRDLAHYLHELSIKHRIVVI 199
+G+++IDSI +R + + +R+ ++ L H L L++K I ++
Sbjct: 217 LPVAIERYDIGLVIIDSITSNYRAEHESNSLQANAKRSSELAKLGHLLRNLAVKEDIAIV 276
Query: 200 CTNQVT 205
NQV+
Sbjct: 277 LANQVS 282
>gi|17864108|ref|NP_524583.1| spindle A, isoform A [Drosophila melanogaster]
gi|2500104|sp|Q27297.1|RAD51_DROME RecName: Full=DNA repair protein Rad51 homolog; AltName:
Full=Protein spindle-A; AltName: Full=RecA protein
homolog
gi|693878|dbj|BAA04580.1| Rad51 [Drosophila melanogaster]
gi|762789|gb|AAA64873.1| RAD51-like protein [Drosophila melanogaster]
gi|807700|dbj|BAA07039.1| RecA protein homologue [Drosophila melanogaster]
gi|7301897|gb|AAF57005.1| spindle A, isoform A [Drosophila melanogaster]
gi|255522982|gb|ACU12383.1| RE29170p [Drosophila melanogaster]
Length = 336
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 97 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 217 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 270
>gi|194905727|ref|XP_001981245.1| GG11967 [Drosophila erecta]
gi|190655883|gb|EDV53115.1| GG11967 [Drosophila erecta]
Length = 335
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 96 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 155
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 156 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 215
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 216 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 269
>gi|194740846|ref|XP_001952901.1| GF17509 [Drosophila ananassae]
gi|190625960|gb|EDV41484.1| GF17509 [Drosophila ananassae]
Length = 345
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
V+ G D GG+ GITE+ G GKT L L + L +Q+ + KGV YIC
Sbjct: 88 VTFGCSALDRCTGGGVVTRGITEIFGGYSVGKTHLLLHLSLGVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF-IDLKRTLESQSG-----FIENKV 152
T S FP RL + + P E D K ++ + F ++ +
Sbjct: 148 TGSPFPARRLLHISKTWEQRYPNTKLNFLANVMVEVQKDAKSLMDCVNNRLSDLFQQHGI 207
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
G+IVIDS+A +FR+ + QRA D+R L + L S K+ V+C N+ S++
Sbjct: 208 GLIVIDSVAAVFRDC---KDFNQRARDLRSLTNTLLSYSEKYNCAVVCVNEAVSSIDGDG 264
Query: 213 KNIPALGLTY 222
+ LGL +
Sbjct: 265 DDQAPLGLQW 274
>gi|24651285|ref|NP_733342.1| spindle A, isoform B [Drosophila melanogaster]
gi|23172653|gb|AAN14213.1| spindle A, isoform B [Drosophila melanogaster]
Length = 279
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 40 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 99
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 100 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 159
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 160 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 213
>gi|406865989|gb|EKD19029.1| DNA repair protein RAD57 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 492
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST + D L GGI G ITE++G SG GKTQ L + L++Q+ PH VLYI T
Sbjct: 127 ISTLDDDLDQALGGGIPTGHITEVAGESGAGKTQFLLTLLLAVQLPAPHGLSSSVLYIST 186
Query: 100 ESVFPTARLAQLCELSPL---AKPKCS-DKI--FITHCYEFIDLKRTLESQSGFIENKVG 153
ES PT RL+QL + P+ A PK + D++ +T E D + + +
Sbjct: 187 ESALPTTRLSQLLKSHPVLLAADPKPTLDQVISIVTPDLESQDHILRFQVPVAVRRHGIR 246
Query: 154 MIVIDSIAGIFRNTYA------------EDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
+I++DS+A +R + E QR+ ++ L L +L+ + I ++
Sbjct: 247 LIILDSVAANYRAEFERPEVGAATGQRREANMAQRSSELVKLGQLLRDLAREQNIAIVVA 306
Query: 202 NQV 204
NQV
Sbjct: 307 NQV 309
>gi|294944311|ref|XP_002784192.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
gi|239897226|gb|EER15988.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
Length = 335
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMT---EIVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+++ +K F G + +STGS K D +L GGI + IT
Sbjct: 60 GLSEQKVEKIQEAARKLTSAGFITGSEFVRTKCKKRFRLSTGSSKVDQLLGGGIESCSIT 119
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E G CGKTQLC + + Q+ Q + G V YI TE+ F R+ Q+ + +
Sbjct: 120 EFYGEFRCGKTQLCHSLSVIAQMPQSYGGANGKVCYIDTENTFRPDRITQIAQAFGVDPQ 179
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAH 178
+ D I CY L + L + E K ++V+DSI G FR + +R
Sbjct: 180 QVLDNIIYARCYNSEHLVQLLLCVAAKMAEEKYALLVVDSIMGPFRVDFTGRGDLAERQQ 239
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + L +LS ++ + V+ TNQV +
Sbjct: 240 LLSRVMSRLQKLSEEYNLAVVITNQVMA 267
>gi|25012918|gb|AAN71546.1| RH24133p [Drosophila melanogaster]
Length = 284
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 40 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 99
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 100 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 159
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 160 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 213
>gi|350537569|ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA repair protein RAD51 homolog
gi|1143810|gb|AAC23700.1| LeRAD51 [Solanum lycopersicum]
Length = 342
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS++ D IL+GGI G ITE+ G CGKTQLC +C++ Q+ G +Y
Sbjct: 103 IQITSGSKELDKILEGGIETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L P + + Y R LE+ S +E + ++
Sbjct: 163 IDAEGTFRPQRLLQIADRYGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 223 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
>gi|195451479|ref|XP_002072940.1| GK13420 [Drosophila willistoni]
gi|194169025|gb|EDW83926.1| GK13420 [Drosophila willistoni]
Length = 355
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
++++TGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ G LY
Sbjct: 113 VMLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQNGGEGKCLY 172
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL+ + + + +P D + Y + L +G + E++ ++
Sbjct: 173 IDTEGTFRPERLSAIAQRYKMEEPDVLDNVAYARAYNSDQQTKLLHMAAGMMFESRYAIL 232
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 233 IVDSAMALYRSEYVGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASV 286
>gi|326427154|gb|EGD72724.1| DMC1 protein [Salpingoeca sp. ATCC 50818]
Length = 340
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 11 GFQEWEVNKVKDLKKKKA-----FQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGI 63
GF E +V KV D KK A F N ++ + V +STG+++ D+IL GGI + I
Sbjct: 62 GFSEAKVEKVLDAAKKLAVGDSPFVTAANFLEARQQVFFISTGAKELDAILGGGIESQQI 121
Query: 64 TELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYICTESVFPTARLAQLCELSPLA 118
TE+ G GK+Q+C+ +C+S QV V+YI TE F RL +C+ +
Sbjct: 122 TEIHGEYRTGKSQICMTLCISAQVPTDETNYSGGKVIYIDTEGAFRPERLEGICDRFNVD 181
Query: 119 KPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMI---VIDSIAGIFRNTY-AEDKYV 174
+ ++ Y L + + + G++ +IDSI FR Y +
Sbjct: 182 YQAALNNVYFCRAYNSEQLATLMADVGAILAQEAGIVRLLIIDSIMATFRTDYCGRGELA 241
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + + L+ + + V+ TNQ+ S
Sbjct: 242 ERQQMLNQVLAAIKRLAEEWNLAVVLTNQMCS 273
>gi|315056697|ref|XP_003177723.1| DNA repair protein RAD57 [Arthroderma gypseum CBS 118893]
gi|311339569|gb|EFQ98771.1| DNA repair protein RAD57 [Arthroderma gypseum CBS 118893]
Length = 608
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 29/188 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D+ L GGI G +TE++G SG GKTQ L + LS+Q+ PH K LYI T
Sbjct: 120 ISTLDPVLDAALNGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPHGLSKNALYIST 179
Query: 100 ESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK- 151
ES T RL+QL L P D I+ + LESQ I +
Sbjct: 180 ESDLATNRLSQLLNEHRTIQALHPHTPRPSLDNIYSVTTVD-------LESQEHIINYQI 232
Query: 152 --------VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+G+++IDSI +R + + ++R+ ++ L H+L L++ H I ++
Sbjct: 233 PVAISRYNIGIVIIDSITANYRAESSTENVSGLLERSGQLKKLGHFLRTLAVTHNIAIVV 292
Query: 201 TNQVTSAM 208
NQ++
Sbjct: 293 ANQISDGF 300
>gi|357479303|ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355510992|gb|AES92134.1| DNA repair protein RAD51-like protein [Medicago truncatula]
Length = 341
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G +Y
Sbjct: 102 IQITTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L P + + Y R LE+ S +E + ++
Sbjct: 162 IDAEGTFRPQRLLQIADRFGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 221
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+IDS ++R ++ + R + L +L+ + + V+ TNQV S + S
Sbjct: 222 IIDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVLTNQVVSQVDGS 278
>gi|302413137|ref|XP_003004401.1| DNA repair protein RAD57 [Verticillium albo-atrum VaMs.102]
gi|261356977|gb|EEY19405.1| DNA repair protein RAD57 [Verticillium albo-atrum VaMs.102]
Length = 459
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 21 KDLKKKKAFQVGKNPIDMT-------EIVVSTGSEKFDSILKGGIHAGGITELSGASGCG 73
+DL + +P+ T +V+ST + D L GGI G +TE++G SG G
Sbjct: 65 RDLGVSRVPAASPSPLKRTLEELTNRPLVISTLDDDLDRALGGGIPTGYVTEIAGESGVG 124
Query: 74 KTQLCLQMCLSLQVSQPH---KGVLYICTESVFPTARLAQLCELSPL-------AKPKCS 123
KTQ L + L++Q+ PH + LYI TE+ T RL Q+ +PL +P +
Sbjct: 125 KTQFLLSLMLAVQLPSPHGLGRRALYISTEAPLSTTRLRQILASNPLLSGLSEEERP-TT 183
Query: 124 DKIFITHCYEFIDLKRTLESQSGF-IE-NKVGMIVIDSIAGIFRNTYAE-------DKYV 174
D I + + + L Q +E + +G++V+DS+A +R +
Sbjct: 184 DAIIVGSVADLESQEHILRFQVPVEVERSNIGLLVLDSVAANYRAEFERGVTKNHGSNMG 243
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
R++++ L L +L+ K+ + V+ NQV
Sbjct: 244 ARSNELIRLGALLRDLAQKYNLAVVVANQV 273
>gi|325190521|emb|CCA25020.1| DNA repair protein RAD51 putative [Albugo laibachii Nc14]
Length = 342
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS D +LKGG G ITEL G GKTQLC Q+C++ Q+ G L+
Sbjct: 104 ITLSTGSSALDELLKGGFETGSITELFGEFRTGKTQLCHQLCVTCQLPVDRGGGEGKALF 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L D + Y ++ +++ + E++ ++
Sbjct: 164 IDTEGTFRPQRLVAIAERYGLDGDSVLDNVAFARAYNSEHQMQLLIQASAMMAESRYALV 223
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS +FR ++ + R ++ L +++ + + V+ TNQ+T+
Sbjct: 224 IVDSATALFRTDFSGRGELAARQQELAKFLRALTKMADEFGVAVVITNQMTA 275
>gi|408405119|ref|YP_006863102.1| DNA repair and recombination protein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365715|gb|AFU59445.1| DNA repair and recombination protein [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 276
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STGS+ FD +L GG+ +TE+ G G GKTQLC +C+ +Q S+ G+ LYI
Sbjct: 41 ISTGSKSFDDLLGGGLETKAVTEVYGEFGTGKTQLCHTLCVMVQQSRLAGGLDAKALYID 100
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE-NKVGMIVI 157
TE+ F R+ + E K + + + Y + +E IE N + +IV+
Sbjct: 101 TENTFRPERIVSIAEARGFDPRKSLENVIVAKAYNSAHQELIIEEAGAVIEDNSIRLIVV 160
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS +R + +R + H L ++ + + V+ TNQ+ ++
Sbjct: 161 DSAVAHYRAEFLGRATLSERQQRLNKFMHILVRIAETYEVAVVLTNQIQAS 211
>gi|171186395|ref|YP_001795314.1| DNA repair and recombination protein RadA [Pyrobaculum neutrophilum
V24Sta]
gi|226736610|sp|B1YC14.1|RADA_THENV RecName: Full=DNA repair and recombination protein RadA
gi|170935607|gb|ACB40868.1| DNA repair and recombination protein RadA [Pyrobaculum neutrophilum
V24Sta]
Length = 330
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG + D +L GGI +TE++G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 99 ISTGVKALDELLGGGIETRAVTEVAGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYID 158
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+ Q+ + L + + IF Y D + L Q+ I +N V ++V
Sbjct: 159 TENTFRPERIMQIAKARGLDPDQALNNIFYARAYSS-DHQMILVDQAKSIIKQNNVALLV 217
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DS+ FR+ + + +R + L L+ + + V+ TNQV +
Sbjct: 218 VDSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNP 277
Query: 208 MTHSDKNIPALGLTY 222
+ + NI A G TY
Sbjct: 278 LRPAGGNILAHGATY 292
>gi|440295416|gb|ELP88329.1| DNA repair protein rad51, putative [Entamoeba invadens IP1]
Length = 357
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 34 NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG 93
N I + +++GS + D +L GG G ITEL G GKTQLC Q+C++ Q+S G
Sbjct: 109 NTIRKETLRITSGSRELDKLLHGGFETGSITELFGEFRTGKTQLCHQLCVTSQLSIEDGG 168
Query: 94 ----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI- 148
+YI TE F RL Q+ E L + + + + + L++ S +
Sbjct: 169 TEGRAMYIDTEGTFRPERLTQIAERYSLNAEEALNNVVVARAHNTEHQMSLLQAASAMMS 228
Query: 149 ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++ G+I+IDS ++R Y+ + R + L ++ + + V+ TNQV +
Sbjct: 229 KDRYGLIIIDSATALYRTDYSGRGELAARQMHLAKFLRSLQRMADEFSVAVVLTNQVVA 287
>gi|119719925|ref|YP_920420.1| DNA repair and recombination protein RadA [Thermofilum pendens Hrk
5]
gi|119525045|gb|ABL78417.1| DNA repair and recombination protein RadA [Thermofilum pendens Hrk
5]
Length = 358
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L+GGI G ITE G G GKTQ+C Q+ + +Q+ + G+ LY+
Sbjct: 126 ISTGVRSLDDLLEGGIEVGSITEFIGEFGAGKTQICHQLSVMVQLPKDKGGLNARALYVD 185
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVI 157
TE F R+ Q+ L K + I Y ++ +IE + +I++
Sbjct: 186 TEGTFRPERIVQIARARGLDPEKTLENIIYARAYNSDHQMLLIDEAKKYIEKYNIRLIIV 245
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA--------M 208
DS+ FR Y + R + LH L+ + + V+ TNQV ++ +
Sbjct: 246 DSLINHFRAEYPGRENLASRQQKLNKHISQLHRLASLYNLAVVVTNQVMASPDIFFGNPL 305
Query: 209 THSDKNIPALGLTY 222
+ NI A G TY
Sbjct: 306 KPAGGNIMAHGCTY 319
>gi|30578205|gb|AAP35099.1|AF485820_1 DMC1 [Entamoeba histolytica]
Length = 334
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS +FD +L GGI +TE+ G GKTQLC + ++ Q+ KG V Y
Sbjct: 95 IKITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAY 154
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY---EFIDLKRTLESQSGFIENKVG 153
I TE F R+AQ+ E + + D I I Y + DL +E + E+
Sbjct: 155 IDTEGTFRPERIAQIAERFGVDQTAVLDNILIARAYTHEQQFDL--LIEVAARMAEDHFR 212
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
M++IDS+ +FR ++ + +R + + + L ++S + + V+ TNQV S
Sbjct: 213 MLIIDSVTSLFRVDFSGRGELSERQQKLGKMMNKLIKISEEFNVAVVITNQVMS 266
>gi|67482461|ref|XP_656580.1| Meiotic recombination protein DMC1 [Entamoeba histolytica
HM-1:IMSS]
gi|56473788|gb|EAL51192.1| Meiotic recombination protein DMC1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704808|gb|EMD44979.1| meiotic recombination protein DMC1, putative [Entamoeba histolytica
KU27]
Length = 347
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS +FD +L GGI +TE+ G GKTQLC + ++ Q+ KG V Y
Sbjct: 108 IKITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAY 167
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY---EFIDLKRTLESQSGFIENKVG 153
I TE F R+AQ+ E + + D I I Y + DL +E + E+
Sbjct: 168 IDTEGTFRPERIAQIAERFGVDQTAVLDNILIARAYTHEQQFDL--LIEVAARMAEDHFR 225
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
M++IDS+ +FR ++ + +R + + + L ++S + + V+ TNQV S
Sbjct: 226 MLIIDSVTSLFRVDFSGRGELSERQQKLGKMMNKLIKISEEFNVAVVITNQVMS 279
>gi|20094878|ref|NP_614725.1| DNA repair and recombination protein RadA [Methanopyrus kandleri
AV19]
gi|19888111|gb|AAM02655.1| RadA recombinase [Methanopyrus kandleri AV19]
Length = 317
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D IL GG+ G +TE +G G GK+Q+ Q+C+++Q+ + G+ ++I
Sbjct: 77 ITTGSSALDEILGGGVPCGELTEFAGPFGSGKSQIVFQLCVNVQLPEEEGGLESKAIFID 136
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVI 157
TE R+ + E L + +F+T + R E E + +G++VI
Sbjct: 137 TEGTVSPGRIKGMAEALGLDPGEALRNVFVTQVRSVEEQMRAAEEAHKLCEREDIGLVVI 196
Query: 158 DSIAGIFRNTYAE--DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
DS+ FR Y++ D ++A M+ + L L++ H + V+ TNQV
Sbjct: 197 DSLTAHFRAEYSKLGDVSERQARLMKHVDQ-LRNLAMDHDVAVVFTNQV 244
>gi|452985882|gb|EME85638.1| hypothetical protein MYCFIDRAFT_131842 [Pseudocercospora fijiensis
CIRAD86]
Length = 420
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 128/308 (41%), Gaps = 61/308 (19%)
Query: 22 DLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM 81
D +A Q G D ++ T + D++L GGI G +TE+ G S GKTQ L +
Sbjct: 65 DTTSARASQRG----DGERGMIPTLHDHLDTVLGGGIARGHLTEIVGESAAGKTQFLLTL 120
Query: 82 CLSLQVS------QPHKG--VLYICTESVFPTARLAQ-------LCELSPLAKPKCSDKI 126
L++Q+S P G LYI TE+ T RL Q L L P +P S+ +
Sbjct: 121 LLAVQMSVTTPDSTPRHGTAALYISTEAPLQTTRLTQILTNHPKLVALPPAERPSLSN-V 179
Query: 127 FITHCYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTY--------AEDKYVQR 176
TH ++ + L Q K VG++V+DS+A +R + + +R
Sbjct: 180 HSTHLHDLEAQEHILRYQVPVAIEKHNVGLLVVDSVAANYRAEFDRGGPGRKGSEARAKR 239
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQV----------------TSAMTHSDKNIPALGL 220
+ + A L L+ K+ I V+ NQV ++ T +P
Sbjct: 240 SAQLAKTASLLRSLAQKYDIAVVVANQVADRFSSTEPALALPPQSTQSTRPGSPLPPFAP 299
Query: 221 TYERAH-DMRDLAHYLHEISIKHWIVVIC----TNQVTSAMTHSDKNIPALGLSWSN--- 272
T +R+H + L + +++ H VTS T P+LGL+W+N
Sbjct: 300 TQQRSHPNSAGLLSHDDPLALDHQQRFFTGWGDDPSVTSLKT------PSLGLTWTNQLS 353
Query: 273 -LIILLNH 279
I LL H
Sbjct: 354 ARIALLKH 361
>gi|407044782|gb|EKE42819.1| meiotic recombinase Dmc1 protein [Entamoeba nuttalli P19]
Length = 347
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS +FD +L GGI +TE+ G GKTQLC + ++ Q+ KG V Y
Sbjct: 108 IKITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAY 167
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY---EFIDLKRTLESQSGFIENKVG 153
I TE F R+AQ+ E + + D I I Y + DL +E + E+
Sbjct: 168 IDTEGTFRPERIAQIAERFGVDQTAVLDNILIARAYTHEQQFDL--LIEVAARMAEDHFR 225
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
M++IDS+ +FR ++ + +R + + + L ++S + + V+ TNQV S
Sbjct: 226 MLIIDSVTSLFRVDFSGRGELSERQQKLGKMMNKLIKISEEFNVAVVITNQVMS 279
>gi|400597535|gb|EJP65265.1| DNA repair protein RAD57 [Beauveria bassiana ARSEF 2860]
Length = 495
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST + D L GG+ G ITE +G SG GKTQ L +CL++Q+ P + LY+ T
Sbjct: 122 ISTLDDTLDEALGGGVPVGYITEFAGESGAGKTQFLLSLCLAVQLPAPRGLGRQALYVST 181
Query: 100 ESVFPTARLAQLCELS--------PLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--E 149
E+ T RL+Q+ S + +P D I T + LE Q +
Sbjct: 182 EAALATRRLSQILAGSDALRNLDAAVDRPSL-DNILSTVTPDLESQDHILEYQVPVLLAR 240
Query: 150 NKVGMIVIDSIAGIFRNTYAE------DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+ +G++VIDS+A +R + R+ + L +L +L+ +H I V+ NQ
Sbjct: 241 HDIGLLVIDSVAANYRAEFESRGSSLGSSMAARSAQLVRLGAHLRDLARRHGIAVVVANQ 300
Query: 204 V----------TSAMTHSDKNIP 216
V +S++ H +P
Sbjct: 301 VADRFASNAPLSSSLAHRTATVP 323
>gi|389860554|ref|YP_006362793.1| DNA repair and recombination protein RadA [Thermogladius
cellulolyticus 1633]
gi|388525457|gb|AFK50655.1| DNA repair and recombination protein RadA [Thermogladius
cellulolyticus 1633]
Length = 322
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS + D+IL GG+ ITE G G GKTQ+C Q+ +++Q+ P KG L Y+
Sbjct: 88 ITTGSRELDNILGGGVETKTITEFFGEYGTGKTQICHQLSVNVQLP-PEKGGLSGKAVYV 146
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L K + IF Y +E F+ +N V ++V
Sbjct: 147 DTEGTFRWERIEAMARAVGLEPDKAMENIFYQRAYNSDHQISIVEELFSFVPKNNVRLVV 206
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+DS+ FR Y + +R + H L L+ + + V+ TNQV
Sbjct: 207 LDSVTSHFRAEYPGREHLAERQQKLNAHLHQLMRLAEAYNLAVVVTNQV 255
>gi|400202049|gb|AFP73608.1| DNA repair protein RAD51 [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 11 GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGI 63
G E +V+K+ + K A Q+ +++ I V+TGS + D IL GGI G I
Sbjct: 69 GISEAKVDKIMEAASKLVPLGFTSATQLHAQRLEI--IQVTTGSRELDRILDGGIETGSI 126
Query: 64 TELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAK 119
TEL G CGKTQLC +C++ Q+ G LYI E F RL Q+ + L
Sbjct: 127 TELYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFGLNG 186
Query: 120 PKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRA 177
+ + Y R LE+ S +E + ++VIDS ++R ++ + R
Sbjct: 187 ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMVIDSATALYRTDFSGRGELSARQ 246
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L +L+ + + V+ +NQV +
Sbjct: 247 MHLAKFLRSLQKLADEFGVAVVISNQVVA 275
>gi|146420325|ref|XP_001486119.1| hypothetical protein PGUG_01790 [Meyerozyma guilliermondii ATCC
6260]
Length = 504
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 9 KLGFQEWEVNKVKD-LKKKKAFQVGKNPI---DMTEIVVSTGSEKFDSILKGGIHAGGIT 64
K+G EV++ + LK + + + P+ + T + VSTG E D L GG G IT
Sbjct: 51 KIGRSPNEVSEFTNRLKSETTRGIIETPVLEPETTTLHVSTGIESLDQRLNGGAKVGDIT 110
Query: 65 ELSGASGCGKTQLCLQMCL-SLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCS 123
E+ GASG GK+QL LQM + S+++ + K V YI TESV T+RL ++ + A P
Sbjct: 111 EIFGASGTGKSQLLLQMSINSVKLHESSKSV-YISTESVIATSRLEEMAGRN--AAPHIM 167
Query: 124 DKIFITHCYEFIDLKRTLESQSGF---IENKVGMIVIDSIAGIFRN-------TYAEDKY 173
+ I +C + L +Q +E V ++VIDSI+ R +Y E +
Sbjct: 168 ENIMSVYCSDLEHQDHILYTQLPALLDLEKNVHLVVIDSISHHLRRDDHISITSYLETRI 227
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAH 233
++ + +L Y +L KH NQ+ S P + RA + L H
Sbjct: 228 REQEAKLSELG-YGADLKRKH------DNQLGRFFRFS----PRYKTSLLRATYISLLHH 276
Query: 234 YLHEISIKHWIVVICTNQVT 253
+L +++ K+ I ++ NQV+
Sbjct: 277 HLLQVAQKYSIAIVIANQVS 296
>gi|440632890|gb|ELR02809.1| hypothetical protein GMDG_05746 [Geomyces destructans 20631-21]
Length = 347
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 28/184 (15%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GG AG ITE++G SG GKTQL L + L++Q+ PH + +YI
Sbjct: 94 AISTLDPSLDGLLSGGFPAGYITEITGESGSGKTQLLLLLLLAVQLPSPHGLNRSAIYIT 153
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI---------E 149
TES PT RLAQL P+ +I H R LE+Q +
Sbjct: 154 TESSLPTTRLAQLRAAHPILAETSLSRILTIHA-------RDLETQDHILRFQLPLAIRR 206
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAH---------DMRDLAHYLHELSIKHRIVVIC 200
+ VG++VIDS+A FR + AH ++ L L + + V+
Sbjct: 207 HNVGLVVIDSVAANFRAEFERSGDGGAAHGANMALRTAELVGLGALLRGAARSEGVAVVV 266
Query: 201 TNQV 204
+NQV
Sbjct: 267 SNQV 270
>gi|145323780|ref|NP_001077479.1| DNA repair protein RAD51-like 4 [Arabidopsis thaliana]
gi|332190053|gb|AEE28174.1| DNA repair protein RAD51-like 4 [Arabidopsis thaliana]
Length = 304
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTE 100
+STG ++ DS+L+GG G +TEL G S GKTQ C+Q S V++ H G VLY+ T
Sbjct: 70 TLSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAAS--VAENHLGRVLYLDTG 127
Query: 101 SVFPTARLAQ-LCELSPLA-KPKCSDKIFITHCYEFI-------DLKRTLESQSGFIENK 151
+ F R+AQ +C S K +I Y+ DL+ TL Q E++
Sbjct: 128 NSFSARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESR 187
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+ ++V+DSI+ + RA M + + L +L+ +H I ++ TN A
Sbjct: 188 LRLLVVDSISSLITPILGGSGSQGRAL-MVAIGYLLKKLAHEHSIAILVTNHTVGAGGEG 246
Query: 212 DKNIPALGLTYE 223
K PALG T++
Sbjct: 247 GKTKPALGETWK 258
>gi|359415641|ref|ZP_09208069.1| DNA repair and recombination protein RadA [Candidatus Haloredivivus
sp. G17]
gi|358034001|gb|EHK02478.1| DNA repair and recombination protein RadA [Candidatus Haloredivivus
sp. G17]
Length = 316
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 28 AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
F+ GK + + + ++T SE D +L GG+ ITE G G KTQL Q+ +++
Sbjct: 67 GFESGKERFEKRKEMKRITTNSENVDEVLGGGVETQAITEFYGEYGSAKTQLSHQLAVNV 126
Query: 86 QVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL 141
Q + G+ +YI TE F R+ Q+ E + + + + I + + D + L
Sbjct: 127 QRDEEDGGLGREAIYIDTEDTFTPTRVEQMAEANGMDVDETLENIHVARAFNS-DHQMLL 185
Query: 142 ESQSGFI--ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
Q+ I EN VG+I++DS+ FR+ Y + R + + L L+ H + V
Sbjct: 186 ADQAQDICAENDVGLIIVDSLTAQFRSDYVGRGELAPRQQKLNKHMNTLLRLANSHNLAV 245
Query: 199 ICTNQVTS 206
+ TNQV S
Sbjct: 246 VVTNQVMS 253
>gi|8439892|gb|AAF75078.1|AC007583_14 Contains similarity to DNA repair protein RAD51 homolog 4 (TRAD)
from Homo sapiens gi|6174940 [Arabidopsis thaliana]
Length = 285
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 13/191 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+STG ++ DS+L+GG G +TEL G S GKTQ C+Q S V++ H G VLY+ T +
Sbjct: 67 LSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAAS--VAENHLGRVLYLDTGN 124
Query: 102 VFPTARLAQ-LCELSPLA-KPKCSDKIFITHCYEFI-------DLKRTLESQSGFIENKV 152
F R+AQ +C S K +I Y+ DL+ TL Q E+++
Sbjct: 125 SFSARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRL 184
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
++V+DSI+ + RA M + + L +L+ +H I ++ TN A
Sbjct: 185 RLLVVDSISSLITPILGGSGSQGRAL-MVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGG 243
Query: 213 KNIPALGLTYE 223
K PALG T++
Sbjct: 244 KTKPALGETWK 254
>gi|145335240|ref|NP_172254.2| DNA repair protein RAD51-like 4 [Arabidopsis thaliana]
gi|83305360|sp|Q9LQQ2.2|RA51D_ARATH RecName: Full=DNA repair protein RAD51 homolog 4; Short=AtRAD51D
gi|57283103|emb|CAD70703.1| putative DNA recombination protein [Arabidopsis thaliana]
gi|58430742|dbj|BAD89165.1| AtRAD51D [Arabidopsis thaliana]
gi|90969171|gb|ABE02570.1| RAD51D splice variant a [Arabidopsis thaliana]
gi|90969179|gb|ABE02658.1| RAD51D splice variant a [Arabidopsis thaliana]
gi|332190052|gb|AEE28173.1| DNA repair protein RAD51-like 4 [Arabidopsis thaliana]
Length = 322
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTE 100
+STG ++ DS+L+GG G +TEL G S GKTQ C+Q S V++ H G VLY+ T
Sbjct: 88 TLSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAAS--VAENHLGRVLYLDTG 145
Query: 101 SVFPTARLAQ-LCELSPLA-KPKCSDKIFITHCYEFI-------DLKRTLESQSGFIENK 151
+ F R+AQ +C S K +I Y+ DL+ TL Q E++
Sbjct: 146 NSFSARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESR 205
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+ ++V+DSI+ + RA M + + L +L+ +H I ++ TN A
Sbjct: 206 LRLLVVDSISSLITPILGGSGSQGRAL-MVAIGYLLKKLAHEHSIAILVTNHTVGAGGEG 264
Query: 212 DKNIPALGLTYERAHDMR 229
K PALG T++ +R
Sbjct: 265 GKTKPALGETWKSIPHVR 282
>gi|341038851|gb|EGS23843.1| DNA repair protein (rad57)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 576
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D+ L GGI ITE++G SG GKTQ L + LS+Q+ PH + +YI
Sbjct: 124 TISTLDPTLDAALSGGIPIRTITEITGESGTGKTQFLLTLLLSVQLPPPHGLGRPAMYIS 183
Query: 99 TESVFPTARLAQLCELSPL-------AKPKCSDKIFITHCYEFIDLKRTLESQSGF-IEN 150
TE+ PT RL+Q+ +P+ +P D+I T + L Q IE
Sbjct: 184 TEAPLPTRRLSQMLSTNPVFQQPPRHQRPSL-DRILSTSTPDLESQDHILTFQVPVEIER 242
Query: 151 K-VGMIVIDSIAGIFRNTYAEDKYVQ------RAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+ VG++V+DS+A +R + Q R ++ L L EL++K+ + V+ NQ
Sbjct: 243 RNVGLLVLDSVAANYRAEFERAGGKQGSNMGARTAELVRLGMLLRELALKYDMAVVVANQ 302
Query: 204 V 204
V
Sbjct: 303 V 303
>gi|430812090|emb|CCJ30489.1| unnamed protein product [Pneumocystis jirovecii]
Length = 664
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 65/269 (24%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
++TG D +L GGI G + E++G SG GK+Q C+Q+CL++Q+ + +G +YI
Sbjct: 78 LTTGDRVIDGVLSGGIPLGHVIEIAGESGTGKSQFCMQLCLTVQLPRVLGGLERGAIYIS 137
Query: 99 TESVFPTARLAQLCE-LSPLAKPK----------CSDKIFITHCYEFIDLKRTLESQ--S 145
TE+ T RL ++ + L+ K + D+++ C + + + Q
Sbjct: 138 TETGLSTKRLFEMAQGLTNRLKQEYPDVDLCLDGVGDRVYCATCVDLEEQDHIIHFQLPV 197
Query: 146 GFIENKVGMIVIDSIAGIFRNTYAEDK------------------YVQRAHDMRDLAHYL 187
G++V+D+I +R Y K V R+ D+ L +L
Sbjct: 198 ALERYNAGLVVLDNITTHYRAEYDISKVYSQTKTTNNTAKSGLVDLVNRSRDLVRLGAHL 257
Query: 188 HELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVI 247
L+ KH +I NQV+ +T+S + + L L Y+ A W
Sbjct: 258 RSLASKHHCAIIVINQVSDKITYSTETL--LDLNYQGA-----------------WF--- 295
Query: 248 CTNQVTSAMTHSDK--NIPALGLSWSNLI 274
+H + +P+LG WSN I
Sbjct: 296 ------QGWSHGEYPCKVPSLGFVWSNNI 318
>gi|346972548|gb|EGY16000.1| DNA-repair protein XRCC3 [Verticillium dahliae VdLs.17]
Length = 459
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 21 KDLKKKKAFQVGKNPIDMT-------EIVVSTGSEKFDSILKGGIHAGGITELSGASGCG 73
+DL + +P+ T +++ST + D L GGI G +TE++G SG G
Sbjct: 65 RDLGVSRVPAASPSPLKRTLEELTNRPLLISTLDDDLDRALGGGIPTGYVTEIAGESGVG 124
Query: 74 KTQLCLQMCLSLQVSQPH---KGVLYICTESVFPTARLAQ-------LCELSPLAKPKCS 123
KTQ L + L++Q+ PH + LYI TE+ T RL Q L +LS +P +
Sbjct: 125 KTQFLLSLMLAVQLPSPHGLGRRALYISTEAPLSTTRLRQILASNSLLSDLSEEERP-TT 183
Query: 124 DKIFITHCYEFIDLKRTLESQSGF-IE-NKVGMIVIDSIAGIFRNTYAE-------DKYV 174
D I + + + L Q +E + +G++V+DS+A +R +
Sbjct: 184 DAIIVGSVADLESQEHILRFQVPVEVERSNIGLLVLDSVAANYRAEFERGVTKNHGSNMG 243
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
R++++ L L +L+ K+ + V+ NQV
Sbjct: 244 ARSNELIRLGALLRDLAQKYNLAVVVANQV 273
>gi|194746120|ref|XP_001955532.1| GF16205 [Drosophila ananassae]
gi|190628569|gb|EDV44093.1| GF16205 [Drosophila ananassae]
Length = 334
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D +L GGI G ITE+ G CGKTQ+C + ++ Q+ KG LY
Sbjct: 93 VQLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQKGGEGKCLY 152
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RL+ + + L + + D + + Y + ++ +G + E++ ++
Sbjct: 153 IDTENTFRPERLSAIAQRYKLNEAEVLDNVACSRAYNSDQQTKLIQMAAGMLFESRYAVV 212
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 213 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASV 266
>gi|432113632|gb|ELK35914.1| DNA repair protein RAD51 like protein 3 [Myotis davidii]
Length = 368
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 84 TQNFIITFCSALDNILGGGVPLTKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVEGEA 143
Query: 95 LYICTESVFPTAR---LAQLC-------------ELSPLAKPKCSDKIFITH-----CYE 133
++I TE F R LA C E P A + + ++H C++
Sbjct: 144 VFIDTEGSFMVDRVIDLATACIQHLQLIAGTSMEEAHPKALENFTLENILSHIYYFRCHD 203
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + S F+ +KV ++++D IA FR+ + D R + LA + L+
Sbjct: 204 YTELLAQVYLLSEFLSEHSKVRLVIVDGIAFPFRHDF--DDLSLRTRLLNGLAQQMISLA 261
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN IPALG ++ A +R + H+
Sbjct: 262 NNHRLAVILTNQMTTKI---DKNQAMLIPALGESWGHAATIRLIFHW 305
>gi|357156164|ref|XP_003577363.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Brachypodium
distachyon]
Length = 340
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 101 IQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 161 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 221 IVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 277
>gi|403376234|gb|EJY88098.1| Meiotic recombination protein DMC1, putative [Oxytricha trifallax]
Length = 286
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS FD +L+GG+ + GITE G GKTQL +C++ Q+ + G VLYI
Sbjct: 49 ISTGSATFDKLLQGGVESQGITEAFGEFRTGKTQLAHTLCVTAQLPKSQGGGEGKVLYID 108
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGMIV 156
TE+ F R+ Q+ L + + I + + +D TL Q+G IE++ ++V
Sbjct: 109 TENTFRPERIKQIARRFELDPDEVLNNIMVGRSFT-VDSLNTLIMQAGGAMIEDQFSLLV 167
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNI 215
IDSI FR Y+ + +R + + + ++S + + V +NQV +
Sbjct: 168 IDSIMAPFRVDYSGRGELSERQQVLGKVLSKIQKISEQFNVAVFLSNQVMAD-------- 219
Query: 216 PALGLTY 222
P +TY
Sbjct: 220 PGASMTY 226
>gi|336121208|ref|YP_004575983.1| DNA repair and recombination protein radA [Methanothermococcus
okinawensis IH1]
gi|334855729|gb|AEH06205.1| DNA repair and recombination protein radA [Methanothermococcus
okinawensis IH1]
Length = 322
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 28 AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
F+ G + ++ + V +STGS++ + IL GG+ + ITE +G G GKTQ+ Q C++L
Sbjct: 63 GFKSGADLLNQRKTVWRLSTGSDELNRILNGGLESQSITEFAGVFGSGKTQIAHQACVNL 122
Query: 86 Q----------------VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT 129
Q ++ P +YI TE F R+ Q+ E + K D F+
Sbjct: 123 QCEDTIFVDNEWVSDEELANPK--AVYIDTEGTFRPERITQMAEALGIDGQKVLDNTFVA 180
Query: 130 HCYEFIDLKRTLES------QSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRD 182
Y D++ +SG N + ++++DS+ FRN Y K +R +
Sbjct: 181 RAYN-SDMQMLFAEKIEELIKSG---NNIKLVIVDSLTSTFRNEYTGRGKLAERQQKLGR 236
Query: 183 LAHYLHELSIKHRIVVICTNQVTS 206
L++L+ H +V+ TNQV++
Sbjct: 237 HMAVLNKLADLHNCIVVITNQVSA 260
>gi|198438041|ref|XP_002130341.1| PREDICTED: similar to Rad51 homolog c [Ciona intestinalis]
Length = 391
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 22/199 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+ST S DS+L GG+ G ITE++G S GKTQLC Q+ + + + GV +YI
Sbjct: 19 ISTFSSNLDSLLGGGVKVGSITEIAGESSTGKTQLCFQLATNAHIHTKYGGVGGETVYID 78
Query: 99 TESVFPTARLAQLC-------ELSPLAKPKCSDK----IFITHCYEFIDLKRTLESQSGF 147
TE F T R+ Q+ E + A +D I++ C + + L F
Sbjct: 79 TEMTFKTERIGQIAQAMVHHFERTKHATDMSADTVLSGIYLFRCIKMVQLLAVSYQLFEF 138
Query: 148 IEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
+++ KV ++++DSIA R AE+ R + +LA L +++ + V+ NQVT
Sbjct: 139 VKSHPKVKLVIVDSIAQXXR---AEEDMKIRNKLLNNLAANLRKIASLLNVAVVLVNQVT 195
Query: 206 SAMTHSDKN--IPALGLTY 222
+ + +PALG ++
Sbjct: 196 TRFDEYGNSCMVPALGESW 214
>gi|242050664|ref|XP_002463076.1| hypothetical protein SORBIDRAFT_02g037320 [Sorghum bicolor]
gi|241926453|gb|EER99597.1| hypothetical protein SORBIDRAFT_02g037320 [Sorghum bicolor]
Length = 344
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 105 IQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 165 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 224
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
V+DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 225 VVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 281
>gi|194691108|gb|ACF79638.1| unknown [Zea mays]
gi|195620070|gb|ACG31865.1| DNA repair protein RAD51 [Zea mays]
gi|414887274|tpg|DAA63288.1| TPA: DNA repair protein RAD51-like protein A [Zea mays]
Length = 340
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 101 IQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 161 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
V+DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 221 VVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 277
>gi|320101396|ref|YP_004176988.1| DNA repair and recombination protein RadA [Desulfurococcus mucosus
DSM 2162]
gi|319753748|gb|ADV65506.1| DNA repair and recombination protein RadA [Desulfurococcus mucosus
DSM 2162]
Length = 329
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 26 KKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
K A +V + +++ +I +TGS D +L GG+ ITE G G GKTQLC Q+ +++
Sbjct: 79 KTAREVKQERLNIRKI--TTGSRSLDELLGGGVETKTITEFYGEYGSGKTQLCHQLSVNV 136
Query: 86 QVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL 141
Q+ G+ +YI TE F R+ + L K D I+ Y +
Sbjct: 137 QLPLEKGGLEGRAVYIDTEGTFRWERIEAMARALGLDPDKVMDNIYYMRAYNSDHQISIV 196
Query: 142 ESQSGFI-ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ FI +N V ++V+DS+ FR Y D +R + H L L+ + + V+
Sbjct: 197 DELFTFIPKNNVKLVVVDSVTSHFRAEYPGRDHLAERQQKLNSHLHQLVRLAEAYNVAVV 256
Query: 200 CTNQVTS 206
TNQV +
Sbjct: 257 VTNQVMA 263
>gi|407040527|gb|EKE40177.1| DNA repair protein RAD51 protein [Entamoeba nuttalli P19]
Length = 365
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 34 NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG 93
N + I ++TGS + D +L GG G ITEL G GKTQLC Q+C++ Q+ + G
Sbjct: 117 NNLRKETIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGG 176
Query: 94 ----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI- 148
+YI TE F RL Q+ E L + + + + + + L+ SG +
Sbjct: 177 TEGRAIYIDTEGTFRPERLTQIAEKYGLNSEEALNNVAVARAHNTEHQMQLLQMASGLMA 236
Query: 149 ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + G+++IDS ++R Y+ + R + L ++ + + V+ TNQV +
Sbjct: 237 KERYGLLIIDSATALYRTDYSGRGELASRQMHLAKFLRALQRIADEFSVAVVLTNQVVA 295
>gi|67477127|ref|XP_654076.1| DNA repair protein RAD51 [Entamoeba histolytica HM-1:IMSS]
gi|56471096|gb|EAL48690.1| DNA repair protein RAD51, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449710730|gb|EMD49753.1| DNA repair protein RAD51, putative [Entamoeba histolytica KU27]
Length = 366
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 34 NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG 93
N + I ++TGS + D +L GG G ITEL G GKTQLC Q+C++ Q+ + G
Sbjct: 118 NNLRKETIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGG 177
Query: 94 ----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI- 148
+YI TE F RL Q+ E L + + + + + + L+ SG +
Sbjct: 178 TEGRAIYIDTEGTFRPERLTQIAEKYGLNSEEALNNVAVARAHNTEHQMQLLQMASGLMA 237
Query: 149 ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + G+++IDS ++R Y+ + R + L ++ + + V+ TNQV +
Sbjct: 238 KERYGLLIIDSATALYRTDYSGRGELASRQMHLAKFLRALQRIADEFSVAVVLTNQVVA 296
>gi|167387582|ref|XP_001738222.1| DNA repair protein rad51 [Entamoeba dispar SAW760]
gi|165898654|gb|EDR25461.1| DNA repair protein rad51, putative [Entamoeba dispar SAW760]
Length = 365
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 34 NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG 93
N + I ++TGS + D +L GG G ITEL G GKTQLC Q+C++ Q+ + G
Sbjct: 117 NNLRKETIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGG 176
Query: 94 ----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI- 148
+YI TE F RL Q+ E L + + + + + + L+ SG +
Sbjct: 177 TEGRAIYIDTEGTFRPERLTQIAEKYGLNSEEALNNVAVARAHNTEHQMQLLQMASGLMA 236
Query: 149 ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + G+++IDS ++R Y+ + R + L ++ + + V+ TNQV +
Sbjct: 237 KERYGLLIIDSATALYRTDYSGRGELASRQMHLAKFLRALQRIADEFSVAVVLTNQVVA 295
>gi|424813640|ref|ZP_18238828.1| RecA/RadA recombinase [Candidatus Nanosalina sp. J07AB43]
gi|339758586|gb|EGQ43841.1| RecA/RadA recombinase [Candidatus Nanosalina sp. J07AB43]
Length = 225
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
VSTGS+ D++L+GGI G I+ G SG GKT C+Q +S +V+ H V YI TE+
Sbjct: 6 VSTGSKPLDTLLEGGIERGVISNFYGESGSGKTNACIQ--ISAEVASSHGNVAYIDTEAS 63
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
F R AQ+ + L + +F+ +F K + S +E + ++V+DS+
Sbjct: 64 FSAERFAQIASEAEL------ENVFVKDVTDFQQQKGAINSLQA-MEQDLELVVVDSMVS 116
Query: 163 IFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++R + +++ + L E++ I V+ TNQV ++
Sbjct: 117 LYRLKVDGGNASEVNNELSEQLSKLSEIARNQDIPVVITNQVYTSF 162
>gi|403416182|emb|CCM02882.1| predicted protein [Fibroporia radiculosa]
Length = 492
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 29/223 (13%)
Query: 17 VNKVKDLK-KKKAFQVG------KNP-----IDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
NK + LK + +A QV K P D+ + + +TG D +L GGI G +
Sbjct: 40 ANKCRILKGQAEALQVDVSQALVKQPCLLEDADLEDEMFTTGDSCLDEVLDGGIRTGMLW 99
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSP-LAK 119
E+ G S GKTQL LQ+ LS+Q+ G+ Y+ T + PT+RL ++ E P L++
Sbjct: 100 EIVGESAAGKTQLALQLSLSVQIPHTLGGLSGTACYLTTSTALPTSRLTEIMERHPLLSR 159
Query: 120 PKCS-DKIFITHCYEFIDLKRTLESQ-SGFIE--------NKVGMIVIDSIAGIF--RNT 167
CS I E L L ++ ++ N V ++VID++A +F +
Sbjct: 160 ENCSLSAIHTIKTPEIPILLHVLSTRLPNLVDSLAKEQNPNPVKLLVIDALAELFHMHDK 219
Query: 168 YAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
D QR+ + +++ LH L+ K+RI V+ N+V ++
Sbjct: 220 TTADVLGQRSKHLAEISTLLHTLASKYRIAVLVLNEVQDVFSN 262
>gi|171689280|ref|XP_001909580.1| hypothetical protein [Podospora anserina S mat+]
gi|170944602|emb|CAP70713.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYI 97
I +ST D L GGI G ITE++G S GKTQ L + L++Q+ PH + LYI
Sbjct: 115 ITISTLDPHLDLALGGGIPTGHITEITGESAAGKTQFLLTLLLAVQLPPPHGLSRPALYI 174
Query: 98 CTESVFPTARLAQLCELSPL-------AKPKCSDKIFITHCYEFIDLKRTLESQSG--FI 148
TE+ T RL+Q+ +PL A+P DKI T + L Q+
Sbjct: 175 STEAPLSTRRLSQMITENPLFSTLPRSARPTL-DKIISTTTPDLESQDHILTYQAPVEIA 233
Query: 149 ENKVGMIVIDSIAGIFR--------NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
VG+++IDS+A +R N+ R +++ L +L +L+ K+ + V+
Sbjct: 234 RRNVGLLIIDSVAANYRAEFERPTPNSNLSSNMGARTNELIKLGMHLKDLAEKYNLAVVV 293
Query: 201 TNQV 204
+NQV
Sbjct: 294 SNQV 297
>gi|161528894|ref|YP_001582720.1| DNA repair and recombination protein RadA [Nitrosopumilus maritimus
SCM1]
gi|160340195|gb|ABX13282.1| DNA repair and recombination protein RadA [Nitrosopumilus maritimus
SCM1]
Length = 388
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TG+ D++ GG+ +TE+ G GCGKTQ M + +Q ++ G VLYI
Sbjct: 88 ITTGTNCLDTLFDGGLETQALTEVYGEFGCGKTQFAHTMSVMVQKTKEEGGLEGSVLYID 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F R+ + + + K D I + Y LE I EN + +IV
Sbjct: 148 TENTFRPERIVSIAQAHEMDPEKVLDNIIVARAYNSAHQTLILEEAGPIIEENNIKLIVA 207
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS G+FR+ Y R + H L ++ + I TNQV ++
Sbjct: 208 DSAVGLFRSEYLGRGTLSNRQQKLNHFVHLLSRIAETYNCAAIATNQVMAS 258
>gi|150399289|ref|YP_001323056.1| DNA repair and recombination protein RadA [Methanococcus vannielii
SB]
gi|150011992|gb|ABR54444.1| DNA repair and recombination protein RadA [Methanococcus vannielii
SB]
Length = 322
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQ------------- 89
+STGS++ D +L GG+ + +TE +G G GKTQ+ Q C++LQ++
Sbjct: 80 LSTGSKELDEVLAGGLESQSVTEFAGMYGSGKTQIMHQSCVNLQIASKIFAETENVLEKE 139
Query: 90 -PHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
P+ +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 LPNPKSVYIDTEGTFRPERILQMAEGAGVDGQYVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ H VV+ TNQV
Sbjct: 199 IKGGNNIKLVIIDSLTSAFRNEFTGRGKLAERQQKLGRHMATLNKLADLHNCVVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|159131375|gb|EDP56488.1| DNA repair protein (Rad57), putative [Aspergillus fumigatus A1163]
Length = 647
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GG+ G +TE++G SG GKTQ L + L++Q+ +P KG +YI
Sbjct: 181 AISTLDPALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPRGLGKGAIYIS 240
Query: 99 TESVFPTARLAQLCE----LSPLAKPKCS--DKIFITHCYEFIDLKRTLESQ--SGFIEN 150
TE+ T+RL+QL E LS L K + D I + + L Q
Sbjct: 241 TEAPLATSRLSQLLEYHPYLSDLPKDRAPTLDNILSINAMDLESQDHILNYQLPVAITRY 300
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + + R+ ++ L L L++ I ++ NQV+
Sbjct: 301 DVGLVVIDSITSNYRAEHTSHNVLGLSTRSGELARLGQMLRNLAVAKNIAIVVANQVS 358
>gi|150401406|ref|YP_001325172.1| DNA repair and recombination protein RadA [Methanococcus aeolicus
Nankai-3]
gi|150014109|gb|ABR56560.1| DNA repair and recombination protein RadA [Methanococcus aeolicus
Nankai-3]
Length = 322
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQ------------- 89
+STGS + D +L GG+ + ITE +G GCGKTQ+ Q C++LQ +
Sbjct: 80 LSTGSSELDDVLAGGLESQSITEFAGLFGCGKTQVAHQACVNLQSRENIFADEEHISEEE 139
Query: 90 -PHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
+ +YI TE F R+ Q+ E + K D F+ Y D++ E
Sbjct: 140 IENAKAVYIDTEGTFRPERIIQMAEAMGIDGNKVLDNTFVARAYN-SDMQMLFAEKVEEL 198
Query: 148 IEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I++ + ++++DS+ FRN Y K +R + L++L+ H +V+ TNQV
Sbjct: 199 IKDGENIKLVIVDSLTSTFRNEYTGRGKLSERQQKLGRHMSVLNKLADLHNCIVMITNQV 258
Query: 205 TS 206
++
Sbjct: 259 SA 260
>gi|119495453|ref|XP_001264511.1| DNA repair protein (Rad57), putative [Neosartorya fischeri NRRL
181]
gi|119412673|gb|EAW22614.1| DNA repair protein (Rad57), putative [Neosartorya fischeri NRRL
181]
Length = 777
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GG+ G +TE++G SG GKTQ L + L++Q+ +P KG +YI
Sbjct: 311 AISTLDPALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPRGLGKGAIYIS 370
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQS---------GFIE 149
TE+ T+RL+QL E P D+ I+ LESQ
Sbjct: 371 TEAPLATSRLSQLLEYHPYLSTLPKDRAPTLENILSIN-AMDLESQDHILNYQLPVAITR 429
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VG++VIDSI +R + + R+ ++ L L L++ +I ++ NQV+
Sbjct: 430 YDVGLVVIDSITSNYRAEHTSHNVLGLSTRSRELARLGQMLRNLAVAKKIAIVVANQVSD 489
Query: 207 AMTHSDKN 214
+ N
Sbjct: 490 RFDPLESN 497
>gi|190345755|gb|EDK37692.2| hypothetical protein PGUG_01790 [Meyerozyma guilliermondii ATCC
6260]
Length = 504
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 29/260 (11%)
Query: 9 KLGFQEWEVNKVKD-LKKKKAFQVGKNPI---DMTEIVVSTGSEKFDSILKGGIHAGGIT 64
K+G EV++ + LK + + + P+ + T VSTG E D L GG G IT
Sbjct: 51 KIGRSPNEVSEFTNRLKSETTRGIIETPVLEPETTTSHVSTGIESLDQRLNGGAKVGDIT 110
Query: 65 ELSGASGCGKTQLCLQMCL-SLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCS 123
E+ GASG GK+QL LQM + S+++ + K V YI TESV T+RL ++ + A P
Sbjct: 111 EIFGASGTGKSQLLLQMSINSVKLHESSKSV-YISTESVIATSRLEEMAGRN--AAPHIM 167
Query: 124 DKIFITHCYEFIDLKRTLESQSGF---IENKVGMIVIDSIAGIFRN-------TYAEDKY 173
+ I +C + L +Q +E V ++VIDSI+ R +Y E +
Sbjct: 168 ENIMSVYCSDLEHQDHILYTQLPALLDLEKNVHLVVIDSISHHLRRDDHISITSYLETRI 227
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAH 233
++ + +L Y +L KH NQ+ S P + RA + L H
Sbjct: 228 REQEAKLSELG-YGADLKRKH------DNQLGRFFRFS----PRYKTSLLRATYISLLHH 276
Query: 234 YLHEISIKHWIVVICTNQVT 253
+L +++ K+ I ++ NQV+
Sbjct: 277 HLLQVAQKYSIAIVIANQVS 296
>gi|41581328|emb|CAE47977.1| rad57 protein, putative [Aspergillus fumigatus]
Length = 571
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GG+ G +TE++G SG GKTQ L + L++Q+ +P KG +YI
Sbjct: 105 AISTLDPALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPRGLGKGAIYIS 164
Query: 99 TESVFPTARLAQLCE----LSPLAKPKCS--DKIFITHCYEFIDLKRTLESQ--SGFIEN 150
TE+ T+RL+QL E LS L K + D I + + L Q
Sbjct: 165 TEAPLATSRLSQLLEYHPYLSDLPKDRAPTLDNILSINAMDLESQDHILNYQLPVAITRY 224
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + + R+ ++ L L L++ I ++ NQV+
Sbjct: 225 DVGLVVIDSITSNYRAEHTSHNVLGLSTRSGELARLGQMLRNLAVAKNIAIVVANQVS 282
>gi|62858301|ref|NP_001016923.1| RAD51 homolog C [Xenopus (Silurana) tropicalis]
gi|58477631|gb|AAH89630.1| MGC107796 protein [Xenopus (Silurana) tropicalis]
gi|89269806|emb|CAJ81518.1| RAD51 homolog C (S. cerevisiae) [Xenopus (Silurana) tropicalis]
Length = 361
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV-- 94
+ ++ V T D IL GGI ITE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 80 EQSQGFVITFCSALDEILGGGIPVAKITEICGVPGVGKTQLCMQLAVDVQIPECFGGVAG 139
Query: 95 --LYICTESVFPTARLAQLCELSPLAKPKCS------------------------DKIFI 128
++I TE F RL +L +++ C+ +I+
Sbjct: 140 ETVFIDTECSF---RLERLMDIANACVQHCNLIAQGHQDKDHIKAMQTFTLNEILSQIYY 196
Query: 129 THCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHY 186
C+++I+L + F+ + KV ++VIDSIA FR+++ ED + R +
Sbjct: 197 FSCHDYIELLAQINLLPDFLSSHPKVKLVVIDSIAFPFRHSF-EDLSL-RTRLLNGFGQQ 254
Query: 187 LHELSIKHRIVVICTNQVTSAMTHSD-KNIPALGLTYERAHDMRDLAHY 234
L L+ + V+ TNQ+T+ + SD K +PALG ++ A +R + H+
Sbjct: 255 LISLAHNCNLAVVLTNQMTTKIGPSDSKLVPALGESWGHASTIRLILHW 303
>gi|70995734|ref|XP_752622.1| DNA repair protein (Rad57) [Aspergillus fumigatus Af293]
gi|66850257|gb|EAL90584.1| DNA repair protein (Rad57), putative [Aspergillus fumigatus Af293]
Length = 647
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GG+ G +TE++G SG GKTQ L + L++Q+ +P KG +YI
Sbjct: 181 AISTLDPALDELLNGGLPTGYLTEVTGESGSGKTQFLLSLLLAVQLPEPRGLGKGAIYIS 240
Query: 99 TESVFPTARLAQLCE----LSPLAKPKCS--DKIFITHCYEFIDLKRTLESQ--SGFIEN 150
TE+ T+RL+QL E LS L K + D I + + L Q
Sbjct: 241 TEAPLATSRLSQLLEYHPYLSDLPKDRAPTLDNILSINAMDLESQDHILNYQLPVAITRY 300
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + + R+ ++ L L L++ I ++ NQV+
Sbjct: 301 DVGLVVIDSITSNYRAEHTSHNVLGLSTRSGELARLGQMLRNLAVAKNIAIVVANQVS 358
>gi|440295039|gb|ELP87968.1| meiotic recombination protein dmc1, putative [Entamoeba invadens
IP1]
Length = 340
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS +FD++L GGI +TE+ G GKTQLC + ++ Q+ KG V Y
Sbjct: 101 IKITTGSAQFDTLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTAQLPANLKGANGKVAY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY---EFIDLKRTLESQSGFIENKVG 153
I TE F R+ Q+ E + + D I I Y + DL +E + E++
Sbjct: 161 IDTEGTFRPERITQIAERFGVDQTAVLDNILIARAYTHEQQFDL--LVEIAARMAEDRFR 218
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++++DS+ +FR ++ + +R + + + L ++S + + V+ TNQV S
Sbjct: 219 LLIVDSVTSLFRVDFSGRGELSERQQKLGKMMNRLIKISEEFNVAVVITNQVMS 272
>gi|340502670|gb|EGR29337.1| hypothetical protein IMG5_158050 [Ichthyophthirius multifiliis]
Length = 479
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGITE 65
G E +++K+ D+ K FQ + I +STGS + D IL GG+ G ITE
Sbjct: 205 GMTEAKIDKILDIACKLVPNDFQTAAEYLQRRAQVINISTGSSELDKILGGGMETGSITE 264
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQ+C +C++ Q+ + G +YI TE F RL Q+ + L +
Sbjct: 265 IFGEFRTGKTQICHTLCITCQLPKSKGGGEGKAMYIDTEGTFRPERLEQIAQRFGLDPQE 324
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAH 178
C + + Y D + L Q+ + E+K ++++DS ++R + + R +
Sbjct: 325 CMENVAYARAYN-CDQQNKLLIQAAALMAESKYSLLIVDSSTALYRTDFLGRGELSVRQN 383
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
+ + L+ + I V+ TNQV SAM D P G
Sbjct: 384 HLGKFLRNIQRLADEFSIAVVITNQVMSQVDGSAMFAGDMKKPIGG 429
>gi|448609989|ref|ZP_21660839.1| DNA repair and recombination protein RadB [Haloferax mucosum ATCC
BAA-1512]
gi|445745348|gb|ELZ96815.1| DNA repair and recombination protein RadB [Haloferax mucosum ATCC
BAA-1512]
Length = 257
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 34 NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG 93
+P D+TE VSTG D +L+GG G +T++ G S GKT + L +++V+
Sbjct: 25 SPSDVTE-SVSTGCSTLDDLLEGGFERGTVTQVYGPSAAGKTNIALSA--AVRVAADSGT 81
Query: 94 VLYICTESVFPTARLAQLCE-LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKV 152
V+YI TE + R QL E ++P + ++ I+ Y+F D ++ + + F EN
Sbjct: 82 VVYIDTEGL-SVDRFQQLAEAVAPEDVESVTSRLMISEAYDFEDQEQAVRDAAEFAEN-A 139
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAH---YLHELSIKHRIVVICTNQVTS 206
+IV+DS G +R D A +R +A +L L+ KH + V+ TNQV S
Sbjct: 140 DLIVLDSATGFYRLERTADGDGGEA--LRRVARQVTHLLSLARKHDLAVVLTNQVYS 194
>gi|386875858|ref|ZP_10118012.1| DNA repair and recombination protein RadA, partial [Candidatus
Nitrosopumilus salaria BD31]
gi|386806330|gb|EIJ65795.1| DNA repair and recombination protein RadA, partial [Candidatus
Nitrosopumilus salaria BD31]
Length = 364
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TG+ D++ GGI +TE+ G GCGKTQ M + +Q S+ G VLYI
Sbjct: 88 ITTGTNCLDTLFDGGIETQALTEVYGEFGCGKTQFAHTMSVMVQKSKEEGGLEGSVLYID 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F R+ + + + K D I + Y LE I EN V +IV
Sbjct: 148 TENTFRPERIVSIAQAHDMDPEKVLDHIIVARAYNSAHQVLILEEAGQIIEENNVKLIVA 207
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS G+FR Y R + H L ++ + I TNQV ++
Sbjct: 208 DSAVGLFRAEYLGRGTLSVRQQKLNHFVHLLSRIAETYNCAAIATNQVMAS 258
>gi|390939022|ref|YP_006402760.1| DNA repair and recombination protein RadA [Desulfurococcus
fermentans DSM 16532]
gi|390192129|gb|AFL67185.1| DNA repair and recombination protein RadA [Desulfurococcus
fermentans DSM 16532]
Length = 328
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS+ D +L GG+ ITE G G GKTQ+C Q+ +++Q++ P KG L YI
Sbjct: 93 ITTGSKSLDELLGGGVETKTITEFFGEYGSGKTQICHQLSVNVQLT-PEKGGLNGRAVYI 151
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L K D I+ Y ++ F+ +N V ++V
Sbjct: 152 DTEGTFRWERIEAMARALGLDPDKVMDNIYYMRAYNSDHQIAIVDELFTFVPKNDVKLVV 211
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ FR Y + +R + H L L+ + + V+ TNQV +
Sbjct: 212 LDSVTSHFRAEYPGREHLAERQQKLNSHLHQLMRLAEAYNVAVVVTNQVMA 262
>gi|6683006|dbj|BAA88984.1| RadA [Pyrobaculum islandicum]
Length = 315
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GGI +TE++G G GKTQLC Q+ + +Q+++ G+ +YI
Sbjct: 84 ISTGVRALDELLGGGIETRAVTEVAGEFGSGKTQLCHQLAVMVQLAEERGGLGAKAIYID 143
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+ Q+ + L + + IF Y D + L Q+ I ++ V +++
Sbjct: 144 TENTFRPERIMQIAKARGLDPDQALNNIFYARAYSS-DHQMILVDQAKSIIRQHNVALLI 202
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DS+ FR+ + + +R + L L+ + + V+ TNQV +
Sbjct: 203 VDSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNP 262
Query: 208 MTHSDKNIPALGLTY 222
+ + NI A G TY
Sbjct: 263 LRPAGGNILAHGATY 277
>gi|303272033|ref|XP_003055378.1| Rad51 DNA recombinase 3 [Micromonas pusilla CCMP1545]
gi|226463352|gb|EEH60630.1| Rad51 DNA recombinase 3 [Micromonas pusilla CCMP1545]
Length = 354
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 39/230 (16%)
Query: 30 QVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQ 89
+ GK PI T S + D++L GG+ AG ITEL G G GKTQ+C+Q+C S+Q+
Sbjct: 89 ETGKLPI-------YTFSSELDALLGGGVAAGEITELCGCPGIGKTQMCVQLCASVQIPH 141
Query: 90 PHKG----VLYICTESVF-----------PTARLAQLCELSP-----------LAKPKCS 123
G +Y+ TE F L + SP +
Sbjct: 142 AFGGYDGEAVYVDTEGSFMAERAEEIAEATARHLRSVSNASPEDAGMSDAIASFTAERML 201
Query: 124 DKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRD 182
+++ + C+E +L LE+ +++ +V ++V+DS+A FR + + R +
Sbjct: 202 ERVHLFRCHEVTELLAVLEALPAYVKKHRVRLVVVDSVAFHFRQDFRD--MALRTTILAK 259
Query: 183 LAHYLHELSIKHRIVVICTNQVT---SAMTHSDKNIPALGLTYERAHDMR 229
+ L +L+ ++ + V+ NQVT + +PALG +Y A R
Sbjct: 260 MTQRLQQLASENALAVVTVNQVTVKPDPRGGGARLVPALGESYAHACTTR 309
>gi|242775222|ref|XP_002478600.1| DNA repair protein (Rad57), putative [Talaromyces stipitatus ATCC
10500]
gi|218722219|gb|EED21637.1| DNA repair protein (Rad57), putative [Talaromyces stipitatus ATCC
10500]
Length = 532
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 19/191 (9%)
Query: 32 GKNPIDMTEI-VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP 90
G N +D++ +ST D +L GGI G +TE++G SG GKTQ L + L+ Q+ P
Sbjct: 93 GNNRLDLSRWNTISTLDTALDELLGGGIATGYLTEITGESGSGKTQFLLNLLLTAQLPSP 152
Query: 91 H---KGVLYICTESVFPTARLAQLCELSP-LAKPKCSDKIFITHCYEFIDLKRTLESQSG 146
+ +YI TE+ T RL+Q+ + P L+K ++ + + + LE+Q
Sbjct: 153 KGLGRKAIYISTEAPLSTPRLSQILQSHPYLSKLPANETPSLANVLSITAID--LETQDH 210
Query: 147 FIENK---------VGMIVIDSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKH 194
+ + VG++VIDSIA +R +A + R+ ++ L H L L+++
Sbjct: 211 ILNYQLPVAISRYNVGLVVIDSIAANYRAEHASNSMQGLSARSGELAKLGHMLRNLAVRE 270
Query: 195 RIVVICTNQVT 205
+ ++ NQV+
Sbjct: 271 DVAIVVANQVS 281
>gi|242069171|ref|XP_002449862.1| hypothetical protein SORBIDRAFT_05g024565 [Sorghum bicolor]
gi|241935705|gb|EES08850.1| hypothetical protein SORBIDRAFT_05g024565 [Sorghum bicolor]
Length = 340
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITE+ G GKTQLC +C++ Q+ G +Y
Sbjct: 98 IQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 158 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 217
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
V+DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 218 VVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 274
>gi|16605548|emb|CAC86604.1| Rad51B protein [Physcomitrella patens]
gi|16605579|emb|CAC82997.1| Rad51B protein [Physcomitrella patens]
Length = 342
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++FDSIL+GGI G ITE+ G GK+Q+C +C++ Q+ G LY
Sbjct: 103 IQITTGSKEFDSILEGGIETGSITEIYGEFRSGKSQICHTLCVTCQLPLDQGGGEGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I E F RL Q+ E L D + Y K +E+ S E + ++
Sbjct: 163 IDAEGTFRPQRLLQIAEKYGLNGQDVLDNVAYARAYNTDHQTKLLVEAASMMAETRFALM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
V+DS ++R Y+ + R + +++ + I V+ TNQV + + S
Sbjct: 223 VVDSATALYRTDYSGRGELAARQFHLAKFLRGCQKMADEFGIAVVVTNQVVAQVDGS 279
>gi|115486271|ref|NP_001068279.1| Os11g0615800 [Oryza sativa Japonica Group]
gi|18874069|dbj|BAB85490.1| Rad51 [Oryza sativa Japonica Group]
gi|77551901|gb|ABA94698.1| DNA repair protein RAD51, putative, expressed [Oryza sativa
Japonica Group]
gi|113645501|dbj|BAF28642.1| Os11g0615800 [Oryza sativa Japonica Group]
gi|218193367|gb|EEC75794.1| hypothetical protein OsI_12723 [Oryza sativa Indica Group]
gi|222616333|gb|EEE52465.1| hypothetical protein OsJ_34631 [Oryza sativa Japonica Group]
Length = 339
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 100 IQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 160 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 220 IVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 276
>gi|374636122|ref|ZP_09707704.1| DNA repair and recombination protein RadA [Methanotorris formicicus
Mc-S-70]
gi|373560070|gb|EHP86345.1| DNA repair and recombination protein RadA [Methanotorris formicicus
Mc-S-70]
Length = 322
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 29/203 (14%)
Query: 28 AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
F+ G + ++ + V +STGS++ DSIL GG+ + +TE +G G GKTQ+ Q C++L
Sbjct: 63 GFKSGVDLLNQRKTVWKLSTGSKELDSILDGGLESQSVTEFAGMFGSGKTQIMHQACVNL 122
Query: 86 Q---------------VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH 130
Q + +P K V YI TE F R+ Q+ E + D F+
Sbjct: 123 QCDDRIMIDDNIKDEILQKPLKAV-YIDTEGTFRPERIVQMAEAIGIDGKDVLDNTFVAR 181
Query: 131 CYEFIDLKRTLESQSGFIEN------KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDL 183
Y D++ + IE+ + ++V+DS+ FRN Y K +R +
Sbjct: 182 AYNS-DMQMLFAEK---IEDLIKEGHNIKLVVVDSLTSTFRNEYTGRGKLAERQQKLGRH 237
Query: 184 AHYLHELSIKHRIVVICTNQVTS 206
L++L+ + VVI TNQV +
Sbjct: 238 MATLNKLADLYNCVVIVTNQVAA 260
>gi|18874071|dbj|BAB85491.1| Rad51 [Oryza sativa Japonica Group]
gi|218186098|gb|EEC68525.1| hypothetical protein OsI_36814 [Oryza sativa Indica Group]
Length = 339
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 100 IQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 160 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 220 IVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 276
>gi|407465361|ref|YP_006776243.1| DNA repair and recombination protein RadA [Candidatus
Nitrosopumilus sp. AR2]
gi|407048549|gb|AFS83301.1| DNA repair and recombination protein RadA [Candidatus
Nitrosopumilus sp. AR2]
Length = 395
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TG+ D++ GGI +TE+ G GCGKTQ M + +Q S+ G VLYI
Sbjct: 88 ITTGTNCLDTLFDGGIETQALTEVYGEFGCGKTQFAHTMSVMVQKSKEEGGLEGSVLYID 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F R+ + + + K D I + Y LE I EN V +I+
Sbjct: 148 TENTFRPERIVSIAQAHDMDPEKVLDNIIVARAYNSAHQVLILEEAGPVIEENNVKLIIA 207
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS G+FR Y R + H L ++ + I TNQV ++
Sbjct: 208 DSAVGLFRAEYLGRGTLSVRQQKLNHFVHLLSRIAETYNCAAIATNQVMAS 258
>gi|298714477|emb|CBJ27499.1| Rad51 DNA recombinase 2 [Ectocarpus siliculosus]
Length = 335
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVS--QPHKGVLY 96
V+TG + D L+GG G ITEL G +G GKTQ CLQ+ CL ++ GV+Y
Sbjct: 85 VATGIQPLDDALQGGFPTGMITELVGPAGIGKTQTCLQVAAQACLPAKLGGLGEDAGVVY 144
Query: 97 ICTESVFPTARLAQLC-ELSP-----LAKPKCSDKIFITHCYEF--------IDLKRTLE 142
+ TE F RL ++ E P + K S + + F +D TL
Sbjct: 145 LDTERKFSPDRLVEIASERHPGHYGEFSTEKGSMERLLNQVTVFPVDNSAALVDRLETL- 203
Query: 143 SQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
Q+ IE+ V +IV+DSIA + R +A + + R + A L L+ VV+ TN
Sbjct: 204 -QARMIESNVRLIVLDSIAALARRDFAREDTLSRQELLTRQAAVLKSLAYTFSAVVLVTN 262
Query: 203 QVTSAM 208
QVT++
Sbjct: 263 QVTTSF 268
>gi|424812469|ref|ZP_18237709.1| DNA repair and recombination protein RadA [Candidatus Nanosalinarum
sp. J07AB56]
gi|339756691|gb|EGQ40274.1| DNA repair and recombination protein RadA [Candidatus Nanosalinarum
sp. J07AB56]
Length = 316
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
++T E FD IL GGI + ITE G G KTQ+ Q+ +++Q+ + +G +YI
Sbjct: 83 ITTSCEAFDEILGGGIESQCITEFYGEYGSAKTQISHQLAVNVQLPEGAGGMDRGAVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE F R+ Q+ E L + + I + + D + L ++ I EN +G++V
Sbjct: 143 TEDTFTPERVEQMAEDKDLDPEEVLENIHVARAFNS-DHQVLLAEEAQDICQENDIGLVV 201
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ FR+ Y + +R + + L L+ H V+ TNQV S
Sbjct: 202 VDSLTAQFRSDYVGRGELAERQQKLNKHMNTLLRLANSHNAAVVVTNQVMS 252
>gi|405959794|gb|EKC25786.1| Leucine-zipper-like transcriptional regulator 1 [Crassostrea gigas]
Length = 1621
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 45 TGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTE 100
T SE D++L GG+ ITE GA G GKTQ+C+Q+ + +Q+ G+ +YI TE
Sbjct: 794 TFSEGLDNMLGGGVPLCKITEFCGAPGVGKTQMCMQIAVDVQIPSQFGGLQGEAVYIDTE 853
Query: 101 SVFPTARLAQLC--------ELSPLAKPKCSD--------KIFITHCYEFIDLKRTLESQ 144
F RL + E++ L K + + C+++++L T+
Sbjct: 854 GSFIVERLVDIAKATVDHCNEMARLEGFKEGEITVESVLSGVHFYRCHDYVELLATVHLL 913
Query: 145 SGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
FI+ K+ ++++DS+A FR+ + D R + +A +L+ + +I ++ TN
Sbjct: 914 PEFIKKHPKIKVVLVDSVAFHFRHDF--DDLSLRTRLLTTMAQSFIKLATEFKIAIVLTN 971
Query: 203 QVTSAMTHSDKN--IPALGLTYERAHDMRDLAHY 234
Q+T+ + + + +PALG ++ A +R + ++
Sbjct: 972 QMTTKFSPGEDSRLVPALGESWGHASTIRVILYW 1005
>gi|350590544|ref|XP_003131708.3| PREDICTED: DNA repair protein RAD51 homolog 3 [Sus scrofa]
Length = 315
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQSFIITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTARLAQLC----------------ELSPLAKPKCSDKIFITH-----CYE 133
++I TE F R+ L E P A + + ++H C +
Sbjct: 147 VFIDTEGSFMVNRVVDLATACIQHLHLIAGTHMEEEQPKALQDFTLENILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHEL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNEALLVPALGESWGHAATIRLIFHW 308
>gi|212532279|ref|XP_002146296.1| DNA repair protein (Rad57), putative [Talaromyces marneffei ATCC
18224]
gi|210071660|gb|EEA25749.1| DNA repair protein (Rad57), putative [Talaromyces marneffei ATCC
18224]
Length = 571
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 32/216 (14%)
Query: 14 EWEVNKVKDLKKKKAFQV-GKNPIDMTE-IVVSTGSEKFDSILKGGIHAGGITELSGASG 71
++ N+ +D K A Q G + +D++ +ST D +L GGI G +TE++G SG
Sbjct: 81 KYSNNENRDDKVVPAGQDDGGSRLDLSRWSTISTLDPALDDLLGGGIPTGYLTEITGESG 140
Query: 72 CGKTQLCLQMCLSLQVSQPH---KGVLYICTESVFPTARLAQ-------LCELSPLAKPK 121
GKTQ L + L Q+ PH + +YI TE+ T RL+Q L +L +P
Sbjct: 141 SGKTQFLLNLLLVAQLPSPHGLGRKAIYISTEASLSTPRLSQILLSHPYLSKLPAAERPS 200
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIENK---------VGMIVIDSIAGIFRNTYAEDK 172
++ + IT ID LE+Q + + VG++VIDSIA +R +A +
Sbjct: 201 LANVLSIT----AID----LETQDHILNYQLPVAISRYNVGLVVIDSIAANYRAEHASNS 252
Query: 173 Y---VQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
R+ ++ L H L L+ + I ++ NQV+
Sbjct: 253 MQSLSARSGELAKLGHMLRNLAAREDIAIVVANQVS 288
>gi|145499122|ref|XP_001435547.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402680|emb|CAK68150.1| unnamed protein product [Paramecium tetraurelia]
Length = 337
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS----QPHKGVLYIC 98
+STGS KFD +L+GGI GGITE+ G GK+Q+C + ++ Q++ +P LYI
Sbjct: 100 ISTGSTKFDKLLRGGIETGGITEIFGEFRTGKSQICHTLAVTCQMNDGKGRPGGKCLYID 159
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFID-LKRTLESQSGFIENKVGMIVI 157
TE F RL+++ + L + + + Y + +K +++ + +K ++++
Sbjct: 160 TEGTFRPERLSEIAKRFELGIEEVLENVSFARAYNVDEQMKLLIQACNLMSTDKYALLIV 219
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA-----MTHS 211
DS ++R Y + R + + L L+ + + V+ TNQV S M
Sbjct: 220 DSATALYRTDYLGRGELSARQNHLGKFLRNLQRLADEFNVAVVITNQVMSQVEGTMMAMG 279
Query: 212 DKNIPALG 219
D+ P G
Sbjct: 280 DQKKPIGG 287
>gi|183227669|dbj|BAG24499.1| rad57 [Coprinopsis cinerea]
Length = 470
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 35 PIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP---- 90
P+D V+STG D L GGI G + E+ G S GK+QL LQ LSL V P
Sbjct: 75 PLDE---VLSTGDAYLDHALGGGIRTGMVWEIVGESAAGKSQLALQ--LSLFVQNPPELG 129
Query: 91 --HKGVLYICTESVFPTARLAQL-----------CELSPLAKPKCSDKIFITHCYEFIDL 137
H Y+ T S PT+RL+Q+ C+L+ + + + +T+ ++L
Sbjct: 130 GIHGAACYLTTSSKLPTSRLSQMLQSNENLSKDSCDLAHVHTIRVNTTPMLTNV--LMNL 187
Query: 138 KRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYV--QRAHDMRDLAHYLHELSIKHR 195
Q + V ++VID++A +FR+T K R+ ++ LA LH L+ +H
Sbjct: 188 LPNFIQQQQTTSHPVKLLVIDALAELFRSTEKMSKTTLFDRSKELNQLALDLHALATRHN 247
Query: 196 IVVICTNQV 204
I V+ N+V
Sbjct: 248 IAVVVLNEV 256
>gi|299753890|ref|XP_001833605.2| Rad51B protein [Coprinopsis cinerea okayama7#130]
gi|298410510|gb|EAU88150.2| Rad51B protein [Coprinopsis cinerea okayama7#130]
Length = 451
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 26/189 (13%)
Query: 35 PIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP---- 90
P+D V+STG D L GGI G + E+ G S GK+QL LQ LSL V P
Sbjct: 56 PLDE---VLSTGDAYLDHALGGGIRTGMVWEIVGESAAGKSQLALQ--LSLFVQNPPELG 110
Query: 91 --HKGVLYICTESVFPTARLAQL-----------CELSPLAKPKCSDKIFITHCYEFIDL 137
H Y+ T S PT+RL+Q+ C+L+ + + + +T+ ++L
Sbjct: 111 GIHGAACYLTTSSKLPTSRLSQMLQSNENLSKDSCDLAHVHTIRVNTTPMLTNV--LMNL 168
Query: 138 KRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYV--QRAHDMRDLAHYLHELSIKHR 195
Q + V ++VID++A +FR+T K R+ ++ LA LH L+ +H
Sbjct: 169 LPNFIQQQQTTSHPVKLLVIDALAELFRSTEKMSKTTLFDRSKELNQLALDLHALATRHN 228
Query: 196 IVVICTNQV 204
I V+ N+V
Sbjct: 229 IAVVVLNEV 237
>gi|406602980|emb|CCH45448.1| hypothetical protein BN7_5030 [Wickerhamomyces ciferrii]
Length = 372
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 38/268 (14%)
Query: 23 LKKKKAFQVGKNPI---DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCL 79
LK + Q+G + I D+ + V +TG +FD IL GG+ G ITE+ G S K+Q +
Sbjct: 61 LKIQTNKQLGDDLIKGDDINQEVFTTGDLEFDKILNGGLRTGMITEIFGESSTAKSQFSM 120
Query: 80 QMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI 135
Q+ ++ +S G+ +YI TE T R L E++P + ++ +C +F
Sbjct: 121 QLTKTINLSPDQGGLGGNSVYISTEGNLETKR---LIEINP-----GIENVYYINCSDFE 172
Query: 136 DLKRTLESQSGFI----ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHD---MRDLAHYLH 188
+ L+ Q + E + +++IDSI+ R Y + +++L YL+
Sbjct: 173 TQEHILKVQLPLLLKDPEKNIRLVIIDSISHHLRVELLNSNYENFNKNQIILQNLGIYLN 232
Query: 189 ELSIKHRIVVICTNQVTSAMTHS--DKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVV 246
+L I +I TNQ++ + + N + + Y+ + W
Sbjct: 233 KLCTDFNISMILTNQISDKPDSNILNTNFKKISMDYQIGW-------------LSGWSSQ 279
Query: 247 ICTNQVTSAMTHSDKNIPALGLSWSNLI 274
N+ + + K IP LGL+WSNLI
Sbjct: 280 DIRNRQDNEFQLNSK-IPTLGLNWSNLI 306
>gi|13878702|sp|Q9Y8J4.1|RADA_DESAM RecName: Full=DNA repair and recombination protein RadA
gi|4929344|gb|AAD33955.1|AF145465_1 recombination/repair protein RadA [Desulfurococcus amylolyticus
Z-533]
Length = 328
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS+ D +L GG+ ITE G G GKTQ+C Q+ +++Q++ P KG L YI
Sbjct: 93 ITTGSKSLDELLGGGVETKTITEFFGEYGSGKTQICHQLSVNVQLT-PEKGGLNGRAVYI 151
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L K D I+ Y ++ F+ +N V +++
Sbjct: 152 DTEGTFRWERIEAMARALGLDPDKVMDNIYYMRAYNSDHQIAIVDELFTFVPKNDVRLVI 211
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ FR Y + +R + H L L+ + + V+ TNQV +
Sbjct: 212 LDSVTSHFRAEYPGREHLAERQQKLNSHLHQLMRLAEAYNVAVVVTNQVMA 262
>gi|218884526|ref|YP_002428908.1| DNA repair and recombination protein RadA [Desulfurococcus
kamchatkensis 1221n]
gi|254764424|sp|B8D610.1|RADA_DESK1 RecName: Full=DNA repair and recombination protein RadA
gi|218766142|gb|ACL11541.1| DNA repair and recombination protein radA [Desulfurococcus
kamchatkensis 1221n]
Length = 328
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS+ D +L GG+ ITE G G GKTQ+C Q+ +++Q++ P KG L YI
Sbjct: 93 ITTGSKSLDELLGGGVETKTITEFFGEYGSGKTQICHQLSVNVQLT-PEKGGLNGRAVYI 151
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L K D I+ Y ++ F+ +N V +++
Sbjct: 152 DTEGTFRWERIEAMARALGLDPDKVMDNIYYMRAYNSDHQIAIVDELFTFVPKNDVRLVI 211
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ FR Y + +R + H L L+ + + V+ TNQV +
Sbjct: 212 LDSVTSHFRAEYPGREHLAERQQKLNSHLHQLMRLAEAYNVAVVVTNQVMA 262
>gi|118575453|ref|YP_875196.1| RecA/RadA recombinase [Cenarchaeum symbiosum A]
gi|145559520|sp|O93748.2|RADA_CENSY RecName: Full=DNA repair and recombination protein RadA
gi|118193974|gb|ABK76892.1| RecA/RadA recombinase [Cenarchaeum symbiosum A]
Length = 398
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYI 97
+++TG++ D++L GGI ITE+ G G GKTQ C MC++ Q + GV+YI
Sbjct: 88 MITTGTDALDALLGGGIETQAITEVFGEFGSGKTQFCHTMCVTTQKPKEEGGLGGGVMYI 147
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + + + + K D I + Y LE I E + +I+
Sbjct: 148 DTEGTFRPERVVTIAKANNMDPAKLLDGIIVARAYNSSHQVLILEEAGKTIQEENIKLII 207
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS G+FR+ Y R + L ++ + V+ TNQV+S+
Sbjct: 208 SDSTTGLFRSEYLGRGTLASRQQKLGRYIRLLARIAETYNCAVLATNQVSSS 259
>gi|119872227|ref|YP_930234.1| DNA repair and recombination protein RadA [Pyrobaculum islandicum
DSM 4184]
gi|143811446|sp|Q9UWR5.2|RADA_PYRIL RecName: Full=DNA repair and recombination protein RadA
gi|119673635|gb|ABL87891.1| DNA repair and recombination protein RadA [Pyrobaculum islandicum
DSM 4184]
Length = 330
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GGI +TE++G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 99 ISTGVRALDELLGGGIETRAVTEVAGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYID 158
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+ Q+ + L + + IF Y D + L Q+ I ++ V +++
Sbjct: 159 TENTFRPERIMQIAKARGLDPDQALNNIFYARAYSS-DHQMILVDQAKSIIRQHNVALLI 217
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DS+ FR+ + + +R + L L+ + + V+ TNQV +
Sbjct: 218 VDSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNP 277
Query: 208 MTHSDKNIPALGLTY 222
+ + NI A G TY
Sbjct: 278 LRPAGGNILAHGATY 292
>gi|378734838|gb|EHY61297.1| DNA repair protein RAD57 [Exophiala dermatitidis NIH/UT8656]
Length = 453
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
V T D L GG G ITE+ G S GKTQL L + LS+Q+ P KG +Y+ T
Sbjct: 106 VKTLDPAIDRALVGGFAPGHITEIVGESAVGKTQLVLGLLLSVQLPPPRGLGKGAIYVST 165
Query: 100 ESVFPTARLAQLCELSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK----- 151
E+ T+RL Q+ P +P+ + H D LE+Q + +
Sbjct: 166 EAPLNTSRLKQMLYAHPEYESMEPQDRPSLDFVHTIATND----LEAQEHILRYQLPVAV 221
Query: 152 ----VGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+G++V+DS+A FR T +RA ++ LA L ++I++ ++ TNQV
Sbjct: 222 ERFNIGLVVLDSVAANFRAEHETRTPAGLAERAVELGKLATMLRRVAIQNNTAIVVTNQV 281
Query: 205 T 205
+
Sbjct: 282 S 282
>gi|254579509|ref|XP_002495740.1| ZYRO0C01958p [Zygosaccharomyces rouxii]
gi|238938631|emb|CAR26807.1| ZYRO0C01958p [Zygosaccharomyces rouxii]
Length = 332
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K +VG P +D+ + V +STGS++ DSIL GGI IT
Sbjct: 57 GLSEVKVEKIKE-AAGKIIKVGFIPATIQLDIRQKVYSISTGSKQLDSILGGGIMTMSIT 115
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQ+ +C++ Q+S+ G V YI TE F R+ Q+ E L P
Sbjct: 116 EVFGEFRCGKTQMSHTLCITAQLSKELGGGEGKVAYIDTEGTFRPERIKQIAERYEL-DP 174
Query: 121 KCSDKIFITHCYEFIDLKRTLES--QSGFIENKVG--------MIVIDSIAGIFRNTYA- 169
+ C E + R L S Q +E G ++++DSI FR Y+
Sbjct: 175 EV--------CLENVSYARALNSEHQMELVEQLGGELSTGQYRLVIVDSIMANFRVDYSG 226
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L+ LS + + V TNQV S
Sbjct: 227 RGELSERQQRLNQHLFRLNRLSEEFNVAVFMTNQVQS 263
>gi|162457755|ref|NP_001104918.1| DNA repair protein RAD51 homolog A [Zea mays]
gi|55976364|sp|Q67EU8.2|R51A1_MAIZE RecName: Full=DNA repair protein RAD51 homolog A; AltName:
Full=Rad51-like protein A; Short=RAD51A; AltName:
Full=ZmRAD51a
gi|4886752|gb|AAD32029.1|AF079428_1 RAD51 homolog RAD51A [Zea mays]
Length = 340
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITE+ G GKTQLC C++ Q+ G LY
Sbjct: 101 IQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTPCVTCQLPLDQGGGEGKALY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 161 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
V+DS ++R ++ + R M L +L+ + + V+ TNQV + + S
Sbjct: 221 VVDSATALYRTDFSGRGELSARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 277
>gi|328875049|gb|EGG23414.1| putative DNA repair protein [Dictyostelium fasciculatum]
Length = 359
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS++ D++L GG AG ITEL G GKTQ+C +C++ Q+S G LYI
Sbjct: 122 LTTGSKELDNLLDGGFEAGSITELFGEFRTGKTQICHTLCVTCQLSINQGGGEGRALYID 181
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVI 157
TE F RL ++ E L + + Y L+ +++ + E++ ++++
Sbjct: 182 TEGTFRPERLLEIAERFGLDGESVLNNVAYARAYNTDHQLQLLVQASAMMSESRYSLLIV 241
Query: 158 DSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
DS ++R Y+ + R + L L+ + IVVI TNQV + + S
Sbjct: 242 DSATALYRTDYSGRSELSDRQRHLARFLRGLQRLADEFGIVVIITNQVVATVDGS 296
>gi|4322494|gb|AAD16063.1| recombination/repair protein RadA [Cenarchaeum symbiosum]
Length = 369
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYI 97
+++TG++ D++L GGI ITE+ G G GKTQ C MC++ Q + GV+YI
Sbjct: 59 MITTGTDALDALLGGGIETQAITEVFGEFGSGKTQFCHTMCVTTQKPKEEGGLGGGVMYI 118
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + + + + K D I + Y LE I E + +I+
Sbjct: 119 DTEGTFRPERVVTIAKANNMDPAKLLDGIIVARAYNSSHQVLILEEAGKTIQEENIKLII 178
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS G+FR+ Y R + L ++ + V+ TNQV+S+
Sbjct: 179 SDSTTGLFRSEYLGRGTLASRQQKLGRYIRLLARIAETYNCAVLATNQVSSS 230
>gi|393795027|ref|ZP_10378391.1| DNA repair and recombination protein RadA [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 396
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
++TG+ D++ GG+ +TE+ G G GKTQ LS+ V +P GVLY
Sbjct: 88 ITTGTNCLDTLFDGGVETQALTEVYGEFGSGKTQFA--HTLSVMVQKPKTEGGLDGGVLY 145
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F R+ + + + K D+I + Y LE I EN + +I
Sbjct: 146 IDTENTFRPERIVSIAQAHEMDPEKVLDRIIVARAYNSAHQTLILEEAGPVIEENNIKLI 205
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V+DS G+FR Y R + H L ++ + I TNQV ++
Sbjct: 206 VVDSAVGLFRAEYLGRGTLSNRQQKLNHFVHMLSRIAETYNCAAIATNQVMAS 258
>gi|30578221|gb|AAP35107.1|AF486821_1 Rad51 [Entamoeba histolytica]
Length = 366
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 34 NPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG 93
N + I ++TGS + D +L GG G ITEL G GKTQLC Q+C++ Q+ + G
Sbjct: 118 NNLRKETIRITTGSRELDKLLCGGFETGSITELFGEFRTGKTQLCHQLCVTCQLGIENGG 177
Query: 94 ----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI- 148
+YI TE F RL Q+ E L + + + + + L+ SG +
Sbjct: 178 TEGRAIYIDTEGTFRPERLTQIAEKYGLNSEEALNNVAVARAHNTEHQMPLLQMASGLMA 237
Query: 149 ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + G+++IDS ++R Y+ + R + L ++ + + V+ TNQV +
Sbjct: 238 KERYGLLIIDSATALYRTDYSGRGELASRQMHLVKFLRALQRIADEFSVAVVLTNQVVA 296
>gi|327311698|ref|YP_004338595.1| DNA repair and recombination protein RadA [Thermoproteus uzoniensis
768-20]
gi|326948177|gb|AEA13283.1| DNA repair and recombination protein RadA [Thermoproteus uzoniensis
768-20]
Length = 337
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GG+ G +TE++G G GKTQ C Q+ + +Q+ + G+ +YI
Sbjct: 106 ISTGVRSLDELLNGGVETGAVTEVAGEFGAGKTQFCHQLAVMVQLPEDRGGLNAKAIYID 165
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+ Q+ L + I+ Y D + L Q+ I ++ V ++V
Sbjct: 166 TENTFRPERITQMARARGLDPDQALKNIYYARAYSS-DHQMILVEQARRIIKQDNVKLLV 224
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DSI FR + + +R + L +++ + + V+ TNQV +
Sbjct: 225 VDSIVAHFRAEFPGRENLAERQQKLNKHIADLLKIADAYDVAVVVTNQVMAQPDVFFGNP 284
Query: 208 MTHSDKNIPALGLTY 222
+ + N+ A G TY
Sbjct: 285 LRPAGGNVLAHGATY 299
>gi|162605684|ref|XP_001713357.1| DNA repair protein Rad51 homolog [Guillardia theta]
gi|13794289|gb|AAK39666.1|AF083031_23 DNA repair protein Rad51 homolog [Guillardia theta]
Length = 331
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS++ D IL GGI G ITE+ G GKTQLC +C++ Q+S G LY
Sbjct: 92 IYLTSGSKELDKILGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLSVSKGGGEGRALY 151
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ + + L + D I Y L S + E++ ++
Sbjct: 152 IDTEGTFRPERIVSIADRFNLNRQDVLDNIAYARAYNTDHQLELLNQASALMSESRYALL 211
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
VIDS ++R Y + R M L L+ + + V+ TNQV
Sbjct: 212 VIDSATSLYRTDYTGRGELASRQQHMARFLRSLQRLADEFGVAVLITNQV 261
>gi|197092361|gb|ACH42253.1| RAD51A recombination protein [Triticum aestivum]
Length = 316
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 104 IQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 164 IDAEGTFRPQRLLQIADRFGLYGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 223
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDS ++R ++ + R + L +L+ + + V+ +NQV +
Sbjct: 224 VIDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVISNQVVA 275
>gi|145492218|ref|XP_001432107.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399216|emb|CAK64710.1| unnamed protein product [Paramecium tetraurelia]
Length = 340
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS----QPHKGVLYIC 98
+STGS KFD +L+GGI GGITE+ G GK+Q+C + ++ Q++ +P LYI
Sbjct: 100 ISTGSTKFDKLLRGGIETGGITEIFGEFRTGKSQICHTLAVTCQMNDARGRPGGKCLYID 159
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE-NKVGMIVI 157
TE F RL+++ + L + + + Y + + L + +K ++++
Sbjct: 160 TEGTFRPERLSEIAKRFELGIEEVLENVSFARAYNVDEQMKLLVQACNLMSTDKYALLIV 219
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS ++R Y + R + + L L+ + + V+ TNQV S
Sbjct: 220 DSATALYRTDYLGRGELSARQNHLGKFLRNLQRLADEFNVAVVITNQVMS 269
>gi|365982437|ref|XP_003668052.1| hypothetical protein NDAI_0A06550 [Naumovozyma dairenensis CBS 421]
gi|343766818|emb|CCD22809.1| hypothetical protein NDAI_0A06550 [Naumovozyma dairenensis CBS 421]
Length = 485
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 13/192 (6%)
Query: 27 KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ 86
+ ++ G + + +TG D L GGI G ITE+ G S GK+QL +Q+CLS+Q
Sbjct: 88 ETYRQGNGQDGCSPVCFTTGDVTIDESLGGGIFLGNITEIFGESSTGKSQLLMQLCLSVQ 147
Query: 87 VSQPHKGV----LYICTESVFPTARLAQLCELSP-LAKPKCSD-KIFITHCYEFIDLKRT 140
+ + G+ +YI TE PT RL + + P L K S IF C + I +
Sbjct: 148 LPKSMGGLESKCVYITTEGDLPTTRLEGILDARPELKKHGVSQHNIFTVSCNDLITQEHI 207
Query: 141 LESQSGFI----ENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIK 193
L Q + E+K+ +I+IDSI+ R T + + + +A L ++ K
Sbjct: 208 LNVQLPVLLEQNESKIKLIIIDSISHHMRVELQTNSIKASRNNRYYVEQMAERLLHIADK 267
Query: 194 HRIVVICTNQVT 205
H + ++ NQV+
Sbjct: 268 HSLAIVVANQVS 279
>gi|195037391|ref|XP_001990144.1| GH18396 [Drosophila grimshawi]
gi|193894340|gb|EDV93206.1| GH18396 [Drosophila grimshawi]
Length = 352
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
++++TGS++ D +L GGI G ITE+ G CGKTQ+C + ++ Q+ G LY
Sbjct: 110 VMLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQNGGEGKALY 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL+ + + + + D + + + ++ +G + E++ +I
Sbjct: 170 IDTEGTFRPERLSAIAQRYSMEEADVLDNVACARAHNTDQQTKLVQMAAGMMFESRYALI 229
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT ++M
Sbjct: 230 IVDSAMALYRSEYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTAQVDGGASM 289
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 290 FQADAKKPIGG 300
>gi|167391058|ref|XP_001739621.1| meiotic recombination protein dmc1 [Entamoeba dispar SAW760]
gi|165896627|gb|EDR23978.1| meiotic recombination protein dmc1, putative [Entamoeba dispar
SAW760]
Length = 347
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS +FD +L GGI +TE+ G GKTQLC + ++ Q+ KG V Y
Sbjct: 108 IKITTGSSQFDQLLGGGIETMSVTEMFGEFRTGKTQLCHTLAVTTQLPSHLKGGNGKVAY 167
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY---EFIDLKRTLESQSGFIENKVG 153
I TE F R+ Q+ E + + D I I Y + DL +E + E+
Sbjct: 168 IDTEGTFRPERITQIAERFGVDQTAVLDNILIARAYTHEQQFDL--LIEVAARMAEDHFR 225
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDS+ +FR ++ + +R + + + L ++S + + V+ TNQV S
Sbjct: 226 ILIIDSVTSLFRVDFSGRGELSERQQKLGKMMNKLIKISEEFNVAVVITNQVMS 279
>gi|242398101|ref|YP_002993525.1| DNA repair and recombination protein radB [Thermococcus sibiricus
MM 739]
gi|259551847|sp|C6A0N1.1|RADB_THESM RecName: Full=DNA repair and recombination protein RadB
gi|242264494|gb|ACS89176.1| DNA repair and recombination protein radB [Thermococcus sibiricus
MM 739]
Length = 228
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
+++TGS+ D++L GGI G +T++ G GKT L +Q+ L V YI TE
Sbjct: 1 MLTTGSKNLDALLGGGIDKGILTQVYGPFATGKTTLAMQIGL-----LNEGKVAYIDTEG 55
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
F RLA++ E + K I ++F + K+T+ + + K MIV+DSI
Sbjct: 56 GFSPERLAKMVESRGMDSNSTLQKFLIFEAFDFKEQKKTISNLKKIVNEKFSMIVVDSIT 115
Query: 162 GIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+R E+K D+ L L+ K+ + VI TNQV
Sbjct: 116 NHYR---VEEKKSSMTTDLGKQLQVLLWLARKYNLAVIVTNQV 155
>gi|333909896|ref|YP_004483629.1| DNA repair and recombination protein radA [Methanotorris igneus Kol
5]
gi|333750485|gb|AEF95564.1| DNA repair and recombination protein radA [Methanotorris igneus Kol
5]
Length = 322
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 29/203 (14%)
Query: 28 AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
F+ G + ++ + V +STGS++ D+IL GG+ + +TE +G G GKTQ+ Q C++L
Sbjct: 63 GFKSGADLLNQRKTVWKLSTGSKELDNILDGGLESQSVTEFAGMFGSGKTQIMHQACVNL 122
Query: 86 Q---------------VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH 130
Q + +P K V YI TE F R+ Q+ E + D F+
Sbjct: 123 QCEDRIIADDSIKDEILEKPLKAV-YIDTEGTFRPERIMQMAEALGIDGKDVLDNTFVAR 181
Query: 131 CYEFIDLKRTLESQSGFIEN------KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDL 183
Y D++ + IE+ + ++V+DS+ FRN Y K +R +
Sbjct: 182 AYNS-DMQMLFAEK---IEDLIKEGHNIKLVVVDSLTSTFRNEYTGRGKLAERQQKLGRH 237
Query: 184 AHYLHELSIKHRIVVICTNQVTS 206
L++L+ + VVI TNQV +
Sbjct: 238 MATLNKLADLYNCVVIVTNQVAA 260
>gi|222154119|gb|ACM47239.1| RAD51 recombination protein [Triticum aestivum]
Length = 343
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 104 IQVTTGSRELDRILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 164 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 223
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDS ++R ++ + R + L +L+ + + V+ +NQV +
Sbjct: 224 VIDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVISNQVVA 275
>gi|222154117|gb|ACM47238.1| RAD51 recombination protein [Triticum aestivum]
Length = 343
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 104 IQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 164 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 223
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDS ++R ++ + R + L +L+ + + V+ +NQV +
Sbjct: 224 VIDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVISNQVVA 275
>gi|298674073|ref|YP_003725823.1| DNA repair and recombination protein RadB [Methanohalobium
evestigatum Z-7303]
gi|298287061|gb|ADI73027.1| DNA repair and recombination protein RadB [Methanohalobium
evestigatum Z-7303]
Length = 222
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTE 100
+ + +G + D++L GG G ++++ G G GKT LC+Q LS++ + K V+Y+ TE
Sbjct: 3 VRLPSGCKPLDNLLGGGFETGIVSQVYGEPGSGKTNLCIQ--LSVECVKQEKKVIYVDTE 60
Query: 101 SVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSI 160
++ P R Q+ + + + I I + F + ++ E +G+I++DS
Sbjct: 61 ALSPD-RFKQIAGDN---SKEIAQNIIIYEPFNFEEQYSAIKDTEKISEENIGLIIVDSA 116
Query: 161 AGIFR-NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-TSAMTHSDKNIPAL 218
+R ED +Q ++ + YLH L+ KH + V+ TNQ+ T A T K I
Sbjct: 117 TAFYRFELENEDSSIQTRRELSNQIGYLHGLARKHSLSVVITNQIYTDASTGEVKPIGGS 176
Query: 219 GLTY 222
G+ +
Sbjct: 177 GIEH 180
>gi|197092359|gb|ACH42252.1| RAD51A recombination protein [Triticum aestivum]
gi|222154121|gb|ACM47240.1| RAD51 recombination protein [Triticum aestivum]
Length = 342
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 103 IQVTTGSRELDKILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 163 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDS ++R ++ + R + L +L+ + + V+ +NQV +
Sbjct: 223 VIDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVISNQVVA 274
>gi|449502449|ref|XP_002199421.2| PREDICTED: DNA repair protein RAD51 homolog 2 [Taeniopygia guttata]
Length = 400
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 16 EVNKVKDLKKKKAFQVG-KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGK 74
+V++ K + A+++ K ++ + +ST D +L GG+ G +TE++G GCGK
Sbjct: 55 KVSRACAPKMQTAYEMKLKKSVNPSSAFLSTTLHGLDRVLHGGVPCGSLTEITGPPGCGK 114
Query: 75 TQLCLQMCL--SLQVSQP--HKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT- 129
TQ C+ + + +L VS V+YI TES F RL ++ A +K+
Sbjct: 115 TQFCIMLSVLATLPVSMGGLDGAVIYIDTESAFSAERLIEIAANRFPAYFDSDEKLLCMT 174
Query: 130 ---HCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHD 179
H Y + LKR + + I KV +I+IDS+A + R +T + +R++
Sbjct: 175 RSIHLYRELTCCSVLKRIMSLEEEVILKKVKLIIIDSVASVVRKEFDTKLQGNLAERSNF 234
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+ A L L+ + I VI TNQ+T++++
Sbjct: 235 LTRGASVLKYLAEEFSIPVILTNQITTSLS 264
>gi|393907809|gb|EFO15910.2| meiotic recombination protein DMC1/LIM15 [Loa loa]
Length = 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 22/227 (9%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K++ K + +++TE +STGS + D +L GGI + ITE
Sbjct: 38 GLSEAKVDKIKEIACKLSNSGFITALEVTERRKLCYRISTGSRELDKLLGGGIESQAITE 97
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQP---HKG--VLYICTESVFPTARLAQLCELSPLAKP 120
+ G GKTQL +C+ Q++ KG V+YI TE+ F RL Q+ E + +
Sbjct: 98 VFGEFRTGKTQLSHTLCVMCQIASETSNFKGGKVIYIDTENTFRPDRLRQINERFKMDQE 157
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFRNTYA-EDKYVQR 176
D I Y L+ + ++G ++V+DSI +FR Y+ + +R
Sbjct: 158 AMLDNILYARAYTSDHQMELLDFVAAKFHEELGVFKLLVVDSIMALFRVDYSGRGELAER 217
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+ + L +++ ++ + V TNQ+T+ P G+T++
Sbjct: 218 QQRLAQMLSRLQKIAEEYNVAVFITNQMTAD--------PGAGITFQ 256
>gi|213972612|ref|NP_001123249.1| Rad51 homolog c [Rattus norvegicus]
gi|149053773|gb|EDM05590.1| similar to RAD51L2/RAD51C protein (predicted) [Rattus norvegicus]
Length = 366
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 147 VFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENILSHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + KV +++ID IA FR+ D R + LA L L+
Sbjct: 207 YTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDL--DDLFLRTRLLNGLAQQLISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
KHR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NKHRLAVILTNQMTTKI---DKNQASLVPALGESWGHAATIRLIFHW 308
>gi|452825486|gb|EME32482.1| DNA repair protein isoform 1 [Galdieria sulphuraria]
Length = 317
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V+KV++ K + + +++ E I ++TGS D +L GGI ITE
Sbjct: 37 GLSEAKVDKVRECAYKISNSSFISGLEVRERRKNLIHITTGSSALDELLGGGIETSSITE 96
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQL +C++ Q+ + G V YI TE+ F R+ ++ E L +
Sbjct: 97 VFGEFRSGKTQLAHTLCVTAQLPKSVNGAEGRVAYIDTENCFRPERIVEIAERFELDPEE 156
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D I + Y + + ++ + + +E G++++DS +FR Y+ +
Sbjct: 157 VLDNILVARAYTSEHQRQILQIELLVHIAAKMVEETFGLLIVDSATALFRVDYSGRGELS 216
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L +LS + + V TNQV S
Sbjct: 217 ERQQKLNRFMSQLLKLSEQFNLAVFITNQVMS 248
>gi|187469096|gb|AAI66862.1| Rad51c protein [Rattus norvegicus]
Length = 345
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 66 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 125
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 126 VFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENILSHIYYFRCHD 185
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + KV +++ID IA FR+ D R + LA L L+
Sbjct: 186 YTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDL--DDLFLRTRLLNGLAQQLISLA 243
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
KHR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 244 NKHRLAVILTNQMTTKI---DKNQASLVPALGESWGHAATIRLIFHW 287
>gi|389624165|ref|XP_003709736.1| hypothetical protein MGG_06985 [Magnaporthe oryzae 70-15]
gi|351649265|gb|EHA57124.1| hypothetical protein MGG_06985 [Magnaporthe oryzae 70-15]
gi|440467178|gb|ELQ36416.1| hypothetical protein OOU_Y34scaffold00663g16 [Magnaporthe oryzae
Y34]
gi|440480744|gb|ELQ61393.1| hypothetical protein OOW_P131scaffold01188g4 [Magnaporthe oryzae
P131]
Length = 548
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 15/178 (8%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST + D+ L GGI G +TE++G SG GKTQ L + L++Q+ PH + +YI
Sbjct: 136 TISTLDPELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHGLGRKAMYIP 195
Query: 99 TESVFPTARLAQLCELSPL---AKPKCS-DKIFITHCYEFIDLKRTLESQSGFIE---NK 151
TE+ T R+AQ+ +PL A P+ S D I I+ + + S +E
Sbjct: 196 TEAALSTRRVAQMLAANPLLLSASPRPSLDSILSLQPLGDIEAQDHILSFQVPLEAARRN 255
Query: 152 VGMIVIDSIAGIFRNTY-----AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
VG+I++DS+A FR Y R+ ++ L L L+ + V+ NQV
Sbjct: 256 VGLIILDSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVANQV 313
>gi|324516267|gb|ADY46476.1| Meiotic recombination protein DMC1/LIM15 [Ascaris suum]
Length = 348
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 30/231 (12%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP-IDMTEIV--------VSTGSEKFDSILKGGIHAG 61
G E +V+K+K++ A ++ KN I E+V +STGS + D +L GGI +
Sbjct: 71 GLSEAKVDKIKEI----AAKLTKNGFITALEVVERRKMCFRISTGSRELDKLLGGGIESQ 126
Query: 62 GITELSGASGCGKTQLCLQMCLSLQV---SQPHKG--VLYICTESVFPTARLAQLCELSP 116
ITE+ G GKTQL +C + Q+ + KG V++I TE+ F RL Q+C+
Sbjct: 127 AITEVFGEFRTGKTQLSHTLCATCQMPNAATSFKGGKVIFIDTENTFRPDRLRQICDRFN 186
Query: 117 LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFRNTYA-EDK 172
+ + D + Y L+ + ++G ++++DS+ +FR Y+ +
Sbjct: 187 MDQEAMLDNVLYARAYTSDHQVELLDYVAAKFHEELGVFKLLIVDSVMALFRVDYSGRGE 246
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L +++ ++ I V TNQ+T+ P G+T++
Sbjct: 247 LAERQQKLAQMMSRLQKIAEEYNIAVFITNQMTAD--------PGAGMTFQ 289
>gi|348567412|ref|XP_003469493.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cavia
porcellus]
Length = 367
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GGI TE+ GA G GKTQLC+Q+ +++Q+ + GV
Sbjct: 88 TQGFIVTFCSALDDILGGGIPLMKTTEICGAPGVGKTQLCMQLAVTVQIPECFGGVAGEA 147
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 148 VFIDTEGSFMVDRMVDLATACIQHLQLIAGIHMDQEHQKALEDFTLENILSHIYYFRCHD 207
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + K+ ++++D IA FR+ + D R + LA + L+
Sbjct: 208 YTELLAQVYLLPDFLSDHSKIRLVIVDGIAFPFRHDF--DDLSLRTRLLNGLAQQMISLA 265
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 266 NHHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 309
>gi|426238577|ref|XP_004013227.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Ovis aries]
Length = 371
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTARL----------------AQLCELSPLAKPKCSDKIFITH-----CYE 133
++I TE F R+ Q+ E P A + + ++H C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLQLIAGTQMGEEHPKALQDFTLENILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + S F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T T D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMT---TKFDRNQALLVPALGESWGHAATIRIIFHW 308
>gi|385867758|pdb|4DC9|A Chain A, Hexameric Ring Of Methanococcus Voltae Rada
gi|385867759|pdb|4DC9|B Chain B, Hexameric Ring Of Methanococcus Voltae Rada
gi|385867760|pdb|4DC9|C Chain C, Hexameric Ring Of Methanococcus Voltae Rada
gi|385867761|pdb|4DC9|D Chain D, Hexameric Ring Of Methanococcus Voltae Rada
gi|385867762|pdb|4DC9|E Chain E, Hexameric Ring Of Methanococcus Voltae Rada
gi|385867763|pdb|4DC9|F Chain F, Hexameric Ring Of Methanococcus Voltae Rada
Length = 266
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + DS+L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 24 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGE 83
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQS 145
V+QP +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 84 VAQPK--AVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIE 140
Query: 146 GFIE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I+ N + ++VIDS+ FRN Y K +R + L++L+ VV+ TN
Sbjct: 141 DLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 200
Query: 203 QVTS 206
QV++
Sbjct: 201 QVSA 204
>gi|121701483|ref|XP_001269006.1| DNA repair protein (Rad57), putative [Aspergillus clavatus NRRL 1]
gi|119397149|gb|EAW07580.1| DNA repair protein (Rad57), putative [Aspergillus clavatus NRRL 1]
Length = 886
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 18/179 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D +L GG+ G +TE++G SG GKTQ L + L++Q+ +P KG +YI T
Sbjct: 443 ISTLDPTLDELLNGGVPVGYLTEVTGESGSGKTQFLLGLLLAVQLPEPRGLGKGAIYIST 502
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-------- 151
E+ T+RL+QL E P D+ I+ LE+Q + +
Sbjct: 503 EAALATSRLSQLLESHPYLSTLPEDRAPTLENILSIN-AMDLETQDHILNYQLPVAITRY 561
Query: 152 -VGMIVIDSIAGIFRNTYAEDKYVQ----RAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + VQ R+ ++ L L L+ H I ++ NQV+
Sbjct: 562 NVGLVVIDSITANYRAEHTSHN-VQGLSTRSSELAKLGQLLRNLATAHNIAIVVANQVS 619
>gi|110742988|dbj|BAE99388.1| RAD51 homolog [Arabidopsis thaliana]
Length = 342
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS + D +L+GGI G ITEL G GKTQLC +C++ Q+ G +Y
Sbjct: 103 IQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 163 IGAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 223 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
>gi|391345455|ref|XP_003747001.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Metaseiulus
occidentalis]
Length = 343
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D +L GGI G +TEL G GKTQLC Q+ ++ Q+ + G LY
Sbjct: 104 IYITTGSAELDKLLGGGIETGSVTELFGEFRTGKTQLCHQLAVTCQLPIDNNGAEGKALY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + E L + D + Y D + L ++G + EN+ +
Sbjct: 164 IDTEGEFRPERLLAVAERYGLEGEQVLDNVSCAKAYN-TDHQTQLLMEAGALMSENRYAL 222
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R+ Y+ + R M L L+ + + V+ TNQV +
Sbjct: 223 LIVDSATALYRSDYSGRSELSARQMHMAKFLRMLGRLADEFGVAVVITNQVMA 275
>gi|13878668|sp|O73948.1|RADA_METVO RecName: Full=DNA repair and recombination protein RadA
gi|3219351|gb|AAC23499.1| RadA [Methanococcus voltae PS]
Length = 322
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + DS+L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 80 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGE 139
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQS 145
V+QP +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 VAQPK--AVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIE 196
Query: 146 GFIE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I+ N + ++VIDS+ FRN Y K +R + L++L+ VV+ TN
Sbjct: 197 DLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 256
Query: 203 QVTS 206
QV++
Sbjct: 257 QVSA 260
>gi|328874953|gb|EGG23318.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
Length = 410
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 26/175 (14%)
Query: 53 ILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLYICTESVFPTA 106
I GG GITE+SG +G GKTQLC+Q+C +Q+ P++ G +YI TE+ FP
Sbjct: 56 IESGGFTPNGITEISGEAGSGKTQLCMQLCFHVQL--PYELGGLNGGAIYIGTETPFPMN 113
Query: 107 RLAQLCE--------------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQ-SGFIENK 151
R ++ + L P+ P D + + +L L I+N
Sbjct: 114 RFLKISQNRLAVINQARQENGLPPIDVPP--DMVMTRRANDINNLLDMLTKNFHELIKNH 171
Query: 152 V-GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
V +++IDSIA + R+ + + +++ + + +L++ L +S ++ I ++ NQVT
Sbjct: 172 VTKLLIIDSIAALIRSEFGNENILEKTNKLWELSNQLRIISEQYGITILVINQVT 226
>gi|109157830|pdb|2GDJ|A Chain A, Delta-62 Rada Recombinase In Complex With Amp-Pnp And
Magnesium
Length = 264
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + DS+L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 22 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGE 81
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQS 145
V+QP +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 82 VAQPK--AVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIE 138
Query: 146 GFIE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I+ N + ++VIDS+ FRN Y K +R + L++L+ VV+ TN
Sbjct: 139 DLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 198
Query: 203 QVTS 206
QV++
Sbjct: 199 QVSA 202
>gi|195395050|ref|XP_002056149.1| GJ10382 [Drosophila virilis]
gi|194142858|gb|EDW59261.1| GJ10382 [Drosophila virilis]
Length = 351
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
++++TGS++ D +L GGI G ITE+ G CGKTQ+C + ++ Q+ G LY
Sbjct: 109 VMLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQNGGEGKALY 168
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL+ + + + + D + + + ++ +G + E++ +I
Sbjct: 169 IDTEGTFRPERLSAIAQRYNMEEADVLDNVACARAHNTDQQTKLVQMAAGMMFESRYALI 228
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+
Sbjct: 229 IVDSAMALYRSEYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTA 280
>gi|310752305|gb|ADP09466.1| RadA [uncultured marine crenarchaeote E48-1C]
Length = 334
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS+ D +L GG+ I+E G G GK+Q+C Q+C+++Q+ G+ LY+
Sbjct: 90 LTTGSKVLDQLLGGGLETQTISEFYGQYGSGKSQICHQLCVNVQLPTEQGGLDGAALYVD 149
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F T R+ Q+ L + + I Y L++ + EN V +IV+
Sbjct: 150 TENTFRTERIVQMSRHLGLEPEQTAKNIIYAEAYTSDHQMFLLDNADEVVKENNVKLIVV 209
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS+ FR+ Y + R + H L L+ V + TNQV S
Sbjct: 210 DSLTSHFRSEYIGREMLAPRQQKLNKHMHKLIRLARAFNTVAVVTNQVMS 259
>gi|52695616|pdb|1T4G|A Chain A, Atpase In Complex With Amp-pnp
gi|56967254|pdb|1XU4|A Chain A, Atpase In Complex With Amp-Pnp, Magnesium And Potassium
Co-F
gi|88193103|pdb|2FPK|A Chain A, Rada Recombinase In Complex With Adp
gi|88193104|pdb|2FPL|A Chain A, Rada Recombinase In Complex With Amp-Pnp And Low
Concentration Of K+
gi|88193105|pdb|2FPM|A Chain A, Rada Recombinase In Complex With Amp-Pnp And High
Concentration Of K+
gi|114793501|pdb|2B21|A Chain A, Rada Recombinase In Complex With Amppnp At Ph 6.0
gi|118138042|pdb|2I1Q|A Chain A, Rada Recombinase In Complex With Calcium
gi|257097225|pdb|3FYH|A Chain A, Recombinase In Complex With Adp And Metatungstate
Length = 322
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + DS+L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 80 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGE 139
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQS 145
V+QP +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 VAQPK--AVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIE 196
Query: 146 GFIE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I+ N + ++VIDS+ FRN Y K +R + L++L+ VV+ TN
Sbjct: 197 DLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 256
Query: 203 QVTS 206
QV++
Sbjct: 257 QVSA 260
>gi|357150566|ref|XP_003575503.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Brachypodium
distachyon]
Length = 346
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 107 IQVTTGSRELDRILEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 166
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 167 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 226
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L +L+ + + V+ +NQV +
Sbjct: 227 VVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVISNQVVA 278
>gi|440902018|gb|ELR52867.1| DNA repair protein RAD51-like protein 3, partial [Bos grunniens
mutus]
Length = 368
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 89 TQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAIDVQIPECFGGVEGEA 148
Query: 95 LYICTESVFPTARLAQLC----------------ELSPLAKPKCSDKIFITH-----CYE 133
++I TE F R+ L E P A + + ++H C +
Sbjct: 149 VFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTLENILSHIYYFRCRD 208
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + S F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 209 YTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 266
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T T D+N +PALG ++ A +R + H+
Sbjct: 267 NNHRLAVILTNQMT---TKFDRNQALLVPALGESWGHAATIRLIFHW 310
>gi|440798730|gb|ELR19797.1| DNA repair protein RAD51, putative [Acanthamoeba castellanii str.
Neff]
Length = 342
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS++ D +L+ GI G ITE+ G GKTQLC Q+C++ Q+ G LY
Sbjct: 102 IQVTTGSKELDKLLENGIETGSITEIFGEFRTGKTQLCHQLCVTCQLPLDQGGGEGKALY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
+ TE F RL + E L D + Y + L S + E++ M+
Sbjct: 162 VDTEGTFRPQRLLAIAERYGLNGDDVLDNVAYARAYNSDHQMQLLAQASAMMSESRYAML 221
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 222 IVDSATALYRTDYSGRGELSARQMHLARFLRTLQRLADEFGVAVVITNQVVAQVDGNAAM 281
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 282 FGADPKKPIGG 292
>gi|145592504|ref|YP_001154506.1| DNA repair and recombination protein RadA [Pyrobaculum arsenaticum
DSM 13514]
gi|166218765|sp|A4WN87.1|RADA_PYRAR RecName: Full=DNA repair and recombination protein RadA
gi|145284272|gb|ABP51854.1| DNA repair and recombination protein RadA [Pyrobaculum arsenaticum
DSM 13514]
Length = 333
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GGI +TE+ G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 102 ISTGVRSLDELLGGGIETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYID 161
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F R+ Q+ L + + IF Y +E + ++ V +IV+
Sbjct: 162 TENTFRPERIMQMARARGLDPDQALNNIFYARAYSSDHQMILVEHAKSIVKQHNVALIVV 221
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------AM 208
DS+ FR+ + + +R + L L+ + + V+ TNQV + +
Sbjct: 222 DSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNPL 281
Query: 209 THSDKNIPALGLTY 222
+ NI A G TY
Sbjct: 282 RPAGGNILAHGATY 295
>gi|358417193|ref|XP_613584.5| PREDICTED: DNA repair protein RAD51 homolog 3 [Bos taurus]
gi|359076460|ref|XP_002695646.2| PREDICTED: DNA repair protein RAD51 homolog 3 [Bos taurus]
Length = 371
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAIDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTARLAQLC----------------ELSPLAKPKCSDKIFITH-----CYE 133
++I TE F R+ L E P A + + ++H C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTLENILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + S F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T T D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMT---TKFDRNQALLVPALGESWGHAATIRLIFHW 308
>gi|18376633|emb|CAD21699.1| Rad51C protein [Cricetulus griseus]
Length = 305
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 43 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 102
Query: 95 LYICTESVFPTAR---LAQLC------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R LA C L I+ C++
Sbjct: 103 VFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTLENILSHIYYFRCHD 162
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ N KV +++ID IA FR+ D R + LA + L+
Sbjct: 163 YTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDL--DDLSLRTRLLNGLAQQMISLA 220
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 221 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 264
>gi|345100717|pdb|3NTU|A Chain A, Rada Recombinase D302k Mutant In Complex With Amp-Pnp
Length = 319
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + DS+L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 77 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGE 136
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQS 145
V+QP +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 137 VAQPK--AVYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIE 193
Query: 146 GFIE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I+ N + ++VIDS+ FRN Y K +R + L++L+ VV+ TN
Sbjct: 194 DLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 253
Query: 203 QVTS 206
QV++
Sbjct: 254 QVSA 257
>gi|67594825|ref|XP_665902.1| Rad51 [Cryptosporidium hominis TU502]
gi|54656768|gb|EAL35671.1| Rad51 [Cryptosporidium hominis]
Length = 347
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS + D +L+GGI G ITE+ G GKTQLC + ++ Q+ HKG L+
Sbjct: 106 IKFTTGSSQLDRLLQGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPVEHKGGEGKCLW 165
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ Q+ + L C D I + L+S + E++ ++
Sbjct: 166 IDTEGTFRPERIVQIADRFNLNASDCLDNIAYARGFNTEHQMDLLQSAVAMMTESRFALM 225
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS------AM 208
++DS ++R+ Y + R + L +++ + V+ TNQV S AM
Sbjct: 226 IVDSATALYRSEYNGRGELATRQSHLGQFLRALQKIADTFGVAVVITNQVMSKVDAMAAM 285
Query: 209 THSDKNIPALG 219
+DK +P G
Sbjct: 286 FQNDK-VPIGG 295
>gi|66357650|ref|XP_626003.1| Rad51 [Cryptosporidium parvum Iowa II]
gi|46227223|gb|EAK88173.1| Rad51 [Cryptosporidium parvum Iowa II]
Length = 347
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS + D +L+GGI G ITE+ G GKTQLC + ++ Q+ HKG L+
Sbjct: 106 IKFTTGSSQLDRLLQGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPVEHKGGEGKCLW 165
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ Q+ + L C D I + L+S + E++ ++
Sbjct: 166 IDTEGTFRPERIVQIADRFNLNASDCLDNIAYARGFNTEHQMDLLQSAVAMMTESRFALM 225
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS------AM 208
++DS ++R+ Y + R + L +++ + V+ TNQV S AM
Sbjct: 226 IVDSATALYRSEYNGRGELATRQSHLGQFLRALQKIADTFGVAVVITNQVMSKVDAMAAM 285
Query: 209 THSDKNIPALG 219
+DK +P G
Sbjct: 286 FQNDK-VPIGG 295
>gi|18312075|ref|NP_558742.1| DNA repair and recombination protein RadA [Pyrobaculum aerophilum
str. IM2]
gi|20139514|sp|Q8ZYR9.1|RADA_PYRAE RecName: Full=DNA repair and recombination protein RadA
gi|18159503|gb|AAL62924.1| DNA repair protein radA [Pyrobaculum aerophilum str. IM2]
gi|18478907|gb|AAL73354.1| DNA repair protein RadA [Pyrobaculum aerophilum]
Length = 333
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GGI +TE+ G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 102 ISTGVRSLDELLGGGIETRAVTEIVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYID 161
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+ Q+ + L + IF Y D + L Q+ I ++ V ++V
Sbjct: 162 TENTFRPERIMQIAKARGLDSDQALHNIFYARAYSS-DHQMILVEQAKSIIKQHNVALLV 220
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DS+ FR+ + + +R + L L+ + + V+ TNQV +
Sbjct: 221 VDSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNP 280
Query: 208 MTHSDKNIPALGLTY 222
+ + NI A G TY
Sbjct: 281 LRPAGGNILAHGATY 295
>gi|379005517|ref|YP_005261189.1| DNA repair and recombination protein RadA [Pyrobaculum oguniense
TE7]
gi|375160970|gb|AFA40582.1| DNA repair and recombination protein RadA [Pyrobaculum oguniense
TE7]
Length = 333
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GGI +TE+ G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 102 ISTGVRSLDELLGGGIETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEERGGLGAKAIYID 161
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F R+ Q+ L + + IF Y +E + ++ V +IV+
Sbjct: 162 TENTFRPERIMQMARARGLDPDQALNNIFYARAYSSDHQMILVEHAKSIVKQHNVALIVV 221
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------AM 208
DS+ FR+ + + +R + L L+ + + V+ TNQV + +
Sbjct: 222 DSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNPL 281
Query: 209 THSDKNIPALGLTY 222
+ NI A G TY
Sbjct: 282 RPAGGNILAHGATY 295
>gi|352682863|ref|YP_004893387.1| DNA repair protein [Thermoproteus tenax Kra 1]
gi|350275662|emb|CCC82309.1| DNA repair protein [Thermoproteus tenax Kra 1]
Length = 382
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GG+ +TE++G G GKTQ C Q+ + +Q+ + G+ +YI
Sbjct: 151 ISTGVRSLDELLNGGVETSAVTEVAGEFGAGKTQFCHQLAVMVQLPEDKGGLSAKAIYID 210
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+AQ+ L + I+ Y D + L Q+ I ++ V ++V
Sbjct: 211 TENTFRPERIAQIARARGLDPDQALKNIYYARAYSS-DHQMILAEQARRIIKQDNVKLLV 269
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DSI FR + + +R + L +++ + + V+ TNQV +
Sbjct: 270 VDSIVAHFRAEFPGRENLAERQQKLNKHIADLLKIADAYDVAVVVTNQVMAQPDVFFGNP 329
Query: 208 MTHSDKNIPALGLTY 222
+ + N+ A G TY
Sbjct: 330 LKPAGGNVLAHGATY 344
>gi|452821241|gb|EME28274.1| DNA repair protein [Galdieria sulphuraria]
Length = 365
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GKTQLC +C++ Q+ + G LY
Sbjct: 126 ISLTTGSQELDNLLAGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPIENGGGEGKALY 185
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I +E F R+ + E L + I + Y D + L +Q+ + E++ +
Sbjct: 186 IDSEGTFRPERIVAISERYGLNSEDVLNNIAVARAYNS-DHQLQLLTQACALMAESRYAL 244
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----AM 208
I++DS ++R Y+ + R M L +L+ + + V+ TNQV + AM
Sbjct: 245 IIVDSATALYRTDYSGRGELAARQQHMARFLRALQKLADEFGVAVVITNQVVAQVDGGAM 304
Query: 209 THSDKNIPALG 219
D P G
Sbjct: 305 FAVDPKKPIGG 315
>gi|402594734|gb|EJW88660.1| DMC1 family protein [Wuchereria bancrofti]
Length = 432
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K++ K +++TE +STGS D +L GGI + ITE
Sbjct: 155 GLSEAKVDKIKEVACKLLNNGFITALEVTERRKLCYRISTGSRDLDKLLGGGIESQAITE 214
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQP---HKG--VLYICTESVFPTARLAQLCELSPLAKP 120
+ G GKTQL +C+ Q++ KG V+YI TE+ F RL Q+ E + +
Sbjct: 215 VFGEFRTGKTQLSHTLCVMCQIASETSNFKGGKVIYIDTENTFRPDRLRQINERFKMDQE 274
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFRNTYA-EDKYVQR 176
D I Y L+ + ++G ++++DSI +FR Y+ + +R
Sbjct: 275 AMLDNILYARAYTSDHQMELLDFVAAKFHEELGIFKLLIVDSIMALFRVDYSGRGELAER 334
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+ + L +++ ++ + V TNQ+T+ P G+T++
Sbjct: 335 QQKLAQMLSRLQKIAEEYNVAVFITNQMTAD--------PGAGMTFQ 373
>gi|320166280|gb|EFW43179.1| RAD51L1 [Capsaspora owczarzaki ATCC 30864]
Length = 358
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 40/167 (23%)
Query: 49 KFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLYICTESV 102
+ D+ L+GG ITEL G SGCGKTQ C M L++Q S P + GV+YI TES
Sbjct: 90 QLDAALRGGFAFSTITELVGPSGCGKTQFC--MMLAVQASLPLEHGGLGGGVVYIDTESA 147
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
F RL L +E ++++DS+A
Sbjct: 148 FSATRLDTL--------------------------------DQAIVERGAKLVILDSVAS 175
Query: 163 IFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+ R Y VQR + ++A L L+ I ++ TNQVT++++
Sbjct: 176 LVRKEYDSKSMVQRTAYLSNVASVLKYLAESFSIPIVVTNQVTTSVS 222
>gi|403217708|emb|CCK72201.1| hypothetical protein KNAG_0J01200 [Kazachstania naganishii CBS
8797]
Length = 478
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+TG D +L GGI+ ITE+ GAS GK+QL +QM LS+Q+ + G+ +YI T
Sbjct: 88 TTGDVTLDELLNGGIYTQSITEIFGASSTGKSQLLMQMALSVQLPRQTNGLGGKCVYITT 147
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDK--IFITHCYEFIDLKRTLESQ-SGFIENKVG--- 153
E PT RL ++ C + IF C + ++ + L Q +E G
Sbjct: 148 EGDLPTKRLEEMIASRDEFTENCVSQKNIFTVSCNDLMNQEHILNVQLPVLLERNAGDIK 207
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMR----DLAHYLHELSIKHRIVVICTNQVT 205
+++IDSI+ R Y Q A + + LA L ++ K+ I ++ NQV+
Sbjct: 208 LVIIDSISHHLRVELVNKSY-QEAQENKFYIDQLAESLLSIATKYDIAIVVANQVS 262
>gi|18420327|ref|NP_568402.1| DNA repair protein RAD51-like 1 [Arabidopsis thaliana]
gi|55976288|sp|P94102.1|RAD51_ARATH RecName: Full=DNA repair protein RAD51 homolog 1; AltName:
Full=Rad51-like protein 1; Short=AtRAD51
gi|1706947|gb|AAB37762.1| RAD51 homolog [Arabidopsis thaliana]
gi|1706949|gb|AAC49555.1| AtRAD51 [Arabidopsis thaliana]
gi|2388778|emb|CAA04529.1| Rad51-like protein [Arabidopsis thaliana]
gi|332005514|gb|AED92897.1| DNA repair protein RAD51-like 1 [Arabidopsis thaliana]
Length = 342
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS + D +L+GGI G ITEL G GKTQLC +C++ Q+ G +Y
Sbjct: 103 IQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 163 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 223 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
>gi|16605546|emb|CAC86603.1| Rad51A protein [Physcomitrella patens]
gi|16605577|emb|CAC82996.1| Rad51A protein [Physcomitrella patens]
Length = 342
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TG+++FD+IL+GGI G ITE+ G GK+Q+C +C++ Q+ G LY
Sbjct: 103 IQITTGAKEFDNILEGGIETGSITEIYGEFRSGKSQICHTLCVTCQLPLDQGGGEGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I E F RL Q+ E L D + Y +K +E+ S E + ++
Sbjct: 163 IDAEGTFRPQRLLQIAEKYGLNGQDVLDNVAYARAYNTDHQMKLLVEAASMMAETRFALM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
V+DS ++R Y+ + R + +++ + I V+ TNQV SAM
Sbjct: 223 VVDSSTALYRTDYSGRGELAARQVHLAKFLRGCQKIADEFGIAVVITNQVVAQVDGSAMF 282
Query: 210 HSDKNIPALG 219
+ ++ P G
Sbjct: 283 NGPQHKPIGG 292
>gi|15897194|ref|NP_341799.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
P2]
gi|284174439|ref|ZP_06388408.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
98/2]
gi|384433707|ref|YP_005643065.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
98/2]
gi|14286170|sp|Q55075.2|RADA_SULSO RecName: Full=DNA repair and recombination protein RadA
gi|126030236|pdb|2DFL|A Chain A, Crystal Structure Of Left-Handed Rada Filament
gi|160286393|pdb|2Z43|A Chain A, Structure Of A Twinned Crystal Of Rada
gi|160286394|pdb|2Z43|B Chain B, Structure Of A Twinned Crystal Of Rada
gi|160286395|pdb|2Z43|C Chain C, Structure Of A Twinned Crystal Of Rada
gi|226438154|pdb|2ZUB|A Chain A, Left Handed Rada
gi|226438155|pdb|2ZUB|B Chain B, Left Handed Rada
gi|226438156|pdb|2ZUC|A Chain A, Crystal Structure Of Left-Handed Rada Filament
gi|226438157|pdb|2ZUC|B Chain B, Crystal Structure Of Left-Handed Rada Filament
gi|226438158|pdb|2ZUD|A Chain A, Crystal Structure Of Left-Handed Rada Filament
gi|226438159|pdb|2ZUD|B Chain B, Crystal Structure Of Left-Handed Rada Filament
gi|13813387|gb|AAK40589.1| DNA repair protein radA (radA) [Sulfolobus solfataricus P2]
gi|261601861|gb|ACX91464.1| DNA repair and recombination protein RadA [Sulfolobus solfataricus
98/2]
Length = 324
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A +V K +++ +I STGS+ D +L GGI +TE G G GKT
Sbjct: 64 EARDALDIRFKTALEVKKERMNVKKI--STGSQALDGLLAGGIETRTMTEFFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKGVL-----YICTESVFPTARLAQLCELSPLAKPKCSDKIF--- 127
QLC Q+ +++Q+ P KG L YI TE F R+ + + L + I+
Sbjct: 122 QLCHQLSVNVQLP-PEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIR 180
Query: 128 ---ITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDL 183
H +D + L S+ I+ +IV+DS+ FR Y + R +
Sbjct: 181 AINTDHQIAIVDDLQELVSKDPSIK----LIVVDSVTSHFRAEYPGRENLAVRQQKLNKH 236
Query: 184 AHYLHELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
H L L+ + I VI TNQV + M + D + G T
Sbjct: 237 LHQLTRLAEVYDIAVIITNQVMARPDMFYGDPTVAVGGHT 276
>gi|334322399|ref|XP_003340234.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Monodelphis
domestica]
Length = 422
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+I+ GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNIMGGGIPLTKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
+++ TE F R+A L L + I+ C+
Sbjct: 147 IFLDTEGSFMVDRVADLATACVQHLHLIAGSHLEEEHQKALENFSLESILSHIYYFRCHN 206
Query: 134 FIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV +I++D IA FR+ + D R + LA L ++
Sbjct: 207 YTELLAQVHLLPDFLLEHSKVQLIIVDGIAFPFRHDF--DDLSLRTRLLNGLAQQLISMA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
H++ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHKLAVIWTNQMTTKI---DKNQSMLVPALGESWGHAATIRLILHW 308
>gi|237843305|ref|XP_002370950.1| meiotic recombination protein DMC1-like protein, putative
[Toxoplasma gondii ME49]
gi|211968614|gb|EEB03810.1| meiotic recombination protein DMC1-like protein, putative
[Toxoplasma gondii ME49]
gi|221481850|gb|EEE20220.1| meiotic recombination protein dmc1, putative [Toxoplasma gondii
GT1]
gi|221502349|gb|EEE28082.1| meiotic recombination protein dmc1, putative [Toxoplasma gondii
VEG]
Length = 349
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 11 GFQEWEVNKVKDLKKK----KAFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+ + K AF G + I ++TGS++ D +L GG IT
Sbjct: 74 GISEAKVEKIVEAAAKLGMCNAFITGVELVQKRGRVIKITTGSDQLDQLLGGGFETMSIT 133
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
EL G + CGKTQLC +C++ Q+ + KG V YI TE F ++ + E L
Sbjct: 134 ELFGENRCGKTQLCHTVCVTAQLPRDMKGGCGKVCYIDTEGTFRPEKIQGIAERFGLDGD 193
Query: 121 KCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D I + + + L + + E + ++++DSI +FR ++ + R
Sbjct: 194 GVLDNIMYARAFTTEHMHQLLTLAAAKMCEERFSVLIVDSIIALFRVDFSGRGELADRQQ 253
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTY 222
+ + + +L+ ++ + V+ TNQV S P GLT+
Sbjct: 254 KLNRMLSIMMKLAEQYNLAVMLTNQVMSD--------PGGGLTF 289
>gi|209875975|ref|XP_002139430.1| Rad51 protein [Cryptosporidium muris RN66]
gi|209555036|gb|EEA05081.1| Rad51 protein, putative [Cryptosporidium muris RN66]
Length = 351
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ H G L+
Sbjct: 109 IRFTTGSKQLDRLLQGGIETGNITEIFGEFRTGKTQLCHTLAVTCQLPVEHNGGEGKCLW 168
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ Q+ E L C D I + L+S + E++ ++
Sbjct: 169 IDTEGTFRPERIVQIAERFSLNASDCLDNIAYARGFNTEHQMDLLQSAVAMMSESRFALM 228
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y + R + L +++ + VI TNQV S
Sbjct: 229 IVDSATALYRSEYNGRGELASRQSHLGQFLRGLQKIADTFGVAVIITNQVMS 280
>gi|227828152|ref|YP_002829932.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.14.25]
gi|227830859|ref|YP_002832639.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
L.S.2.15]
gi|229579745|ref|YP_002838144.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.G.57.14]
gi|229581586|ref|YP_002839985.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.N.15.51]
gi|229585381|ref|YP_002843883.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.27]
gi|238620342|ref|YP_002915168.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.4]
gi|284998366|ref|YP_003420134.1| DNA repair or recombination protein RadA [Sulfolobus islandicus
L.D.8.5]
gi|385773822|ref|YP_005646389.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
HVE10/4]
gi|385776457|ref|YP_005649025.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
REY15A]
gi|259551812|sp|C3MZK6.1|RADA_SULIA RecName: Full=DNA repair and recombination protein RadA
gi|259551815|sp|C4KIT6.1|RADA_SULIK RecName: Full=DNA repair and recombination protein RadA
gi|259551818|sp|C3MRI1.1|RADA_SULIL RecName: Full=DNA repair and recombination protein RadA
gi|259551822|sp|C3MY77.1|RADA_SULIM RecName: Full=DNA repair and recombination protein RadA
gi|259551825|sp|C3NFU5.1|RADA_SULIN RecName: Full=DNA repair and recombination protein RadA
gi|259551829|sp|C3N7M8.1|RADA_SULIY RecName: Full=DNA repair and recombination protein RadA
gi|227457307|gb|ACP35994.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
L.S.2.15]
gi|227459948|gb|ACP38634.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.14.25]
gi|228010460|gb|ACP46222.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.G.57.14]
gi|228012302|gb|ACP48063.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
Y.N.15.51]
gi|228020431|gb|ACP55838.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.27]
gi|238381412|gb|ACR42500.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
M.16.4]
gi|284446262|gb|ADB87764.1| DNA repair or recombination protein RadA [Sulfolobus islandicus
L.D.8.5]
gi|323475205|gb|ADX85811.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
REY15A]
gi|323477937|gb|ADX83175.1| DNA repair and recombination protein RadA [Sulfolobus islandicus
HVE10/4]
Length = 324
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A +V K +++ +I STGS+ D +L GGI +TE G G GKT
Sbjct: 64 EARDALDIRFKTALEVKKERMNVKKI--STGSQALDGLLAGGIETRTMTEFFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKGVL-----YICTESVFPTARLAQLCELSPLAKPKCSDKIF--- 127
QLC Q+ +++Q+ P KG L YI TE F R+ + + L + I+
Sbjct: 122 QLCHQLSVNVQLP-PEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIR 180
Query: 128 ---ITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDL 183
H +D + L S+ I+ +IV+DS+ FR Y + R +
Sbjct: 181 AINTDHQIAIVDDLQELVSKDPSIK----LIVVDSVTSHFRAEYPGRENLAVRQQKLNKH 236
Query: 184 AHYLHELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
H L L+ + I VI TNQV + M + D + G T
Sbjct: 237 LHQLTRLAEVYDIAVIITNQVMARPDMFYGDPTVAVGGHT 276
>gi|313214368|emb|CBY42765.1| unnamed protein product [Oikopleura dioica]
gi|313239465|emb|CBY14399.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++FD +L GGI G ITEL G GK+QLC+ + ++ Q+ G LY
Sbjct: 100 IRITTGSKEFDRMLAGGIETGSITELFGEFRTGKSQLCMTLAVTAQLPVDLGGGEGKALY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L + + + E++ ++
Sbjct: 160 IDTEGTFRPERLLAISERYGLSGKDVLDNVAVARAFSTDHQMTMLHTCAAMMTESRYSIM 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS---AMTHS 211
++DSI ++R+ Y+ + R + L +L+ + ++ TNQVT+ M
Sbjct: 220 IVDSIMALYRSDYSGRGELAARQMHLGKFLRGLLKLADTFGVAIVITNQVTANVDGMMMG 279
Query: 212 DKNIPALG 219
D P G
Sbjct: 280 DNQTPVGG 287
>gi|19115078|ref|NP_594166.1| RecA family ATPase Dmc1 [Schizosaccharomyces pombe 972h-]
gi|12644064|sp|O42634.2|DMC1_SCHPO RecName: Full=Meiotic recombination protein dmc1
gi|2887332|emb|CAA17024.1| RecA family ATPase Dmc1 [Schizosaccharomyces pombe]
gi|3176384|dbj|BAA28671.1| dmc1 [Schizosaccharomyces pombe]
Length = 332
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 25/219 (11%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGI 58
+LK+ GF E +V+K+K+ K A ++ +N + I STGSE + IL GGI
Sbjct: 53 LLKIKGFSEAKVDKLKEAASKMCPANFSTAMEISQNRKKVWSI--STGSEALNGILGGGI 110
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ ITE+ G CGKTQ+ +C++ Q+ + G V +I TE F R+ + E
Sbjct: 111 QSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAER 170
Query: 115 SPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
+ + + I ++ Y E+I T+ ++ G + ++++DSI +FR Y
Sbjct: 171 FGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDG----QYRLLIVDSIMALFRVDY 226
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + + L+ +S + + V TNQV +
Sbjct: 227 SGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQA 265
>gi|440634655|gb|ELR04574.1| meiotic recombinase Dmc1 [Geomyces destructans 20631-21]
Length = 344
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS++ D+IL GG I+E+ G CGKTQ+C M + Q+ + G V +I
Sbjct: 105 ISTGSKQLDTILLGGFETMSISEIYGEFRCGKTQICHTMAVMAQLPREMGGAEGKVAWID 164
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+AQ+ E + + D I ++ H YE +D+ F +
Sbjct: 165 TEGTFRPERIAQIAERFGVDPEQACDNICVSRSLNSEHQYELLDVL-----AFNFCSGEY 219
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++VIDS+ +FR Y+ + +R + L L+ + + V+ TNQV S
Sbjct: 220 RLLVIDSVMALFRTDYSGRGELAERQQALGQFLKRLAALAEEFNVCVVMTNQVQS 274
>gi|324517282|gb|ADY46774.1| DNA repair protein RAD51 3 [Ascaris suum]
Length = 266
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 15/172 (8%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICT 99
E ++STG + D++L GGI AG E+ G S GK+QLC+Q+ +++Q + +Y+ T
Sbjct: 28 EEILSTGVIQLDTLLGGGITAGTFLEIVGLSSAGKSQLCMQLAVNVQKHKRRNECVYVDT 87
Query: 100 ESVFPTARLAQLCELSPLAKP-----KCSDKIFITHCYEFIDLKRTLESQSGFIEN--KV 152
E F T R +C+++ P C +I C++ + L TL I K+
Sbjct: 88 EGGFSTKR---ICDIAMRCLPSEYVASCLQRIHHCRCHDAVQLTSTLHRLDTLISQNPKI 144
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
G+I++DS+A R + H + D + L L++ R VVI N V
Sbjct: 145 GLIIVDSVAMPLRGEIDHMR-----HMIMDFSCLLSSLAVSCRCVVIVVNHV 191
>gi|401412279|ref|XP_003885587.1| putative meiotic recombination protein DMC1-like protein [Neospora
caninum Liverpool]
gi|325120006|emb|CBZ55559.1| putative meiotic recombination protein DMC1-like protein [Neospora
caninum Liverpool]
Length = 349
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 24/193 (12%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GG ITEL G + CGKTQ+C +C++ Q+ + KG V Y
Sbjct: 110 IKITTGSDQLDQLLGGGFETMSITELFGENRCGKTQICHTVCVTAQLPRDMKGGCGKVCY 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKI-----FIT-HCYEFIDLKRTLESQSGFIEN 150
I TE F ++ + E L D I F T H Y+ + + + + E
Sbjct: 170 IDTEGTFRPEKIQGIAERFGLDGDGVLDNIMYARAFTTEHMYQLLTI-----AAAKMCEE 224
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+ ++++DSI +FR ++ + R + + + +L+ ++ + V+ TNQV S
Sbjct: 225 RFSVLIVDSIIALFRVDFSGRGELADRQQKLNKMLSVMMKLAEQYNLAVLLTNQVMSD-- 282
Query: 210 HSDKNIPALGLTY 222
P GLT+
Sbjct: 283 ------PGGGLTF 289
>gi|346644687|ref|NP_001231005.1| DNA repair protein RAD51 homolog 3 [Cricetulus griseus]
gi|81901537|sp|Q8R2J9.1|RA51C_CRIGR RecName: Full=DNA repair protein RAD51 homolog 3; Short=R51H3;
AltName: Full=RAD51 homolog C; AltName: Full=RAD51-like
protein 2
gi|19702129|emb|CAC88355.1| RAD51-like protein 2 [Cricetulus griseus]
Length = 366
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTAR---LAQLC------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R LA C L I+ C++
Sbjct: 147 VFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTLENILSHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ N KV +++ID IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|395845975|ref|XP_003795692.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Otolemur garnettii]
Length = 347
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 42/220 (19%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGVPLMKTTEICGAPGVGKTQLCIQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTAR---LAQLC-------------ELSPLAKPKCSDKIFITHCYEFIDLK 138
++I TE F R +A C E S AKP C + CY+F
Sbjct: 147 IFIDTEGSFMIDRVVDIATACIQHLQLIAETHIGEGSLGAKPIC-----VFQCYDFTSSN 201
Query: 139 RTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
+L V ++++D IA FR+ D R + LA + L+ +++ V
Sbjct: 202 SSLPD--------VRLVIVDGIAFPFRHDI--DDLSLRTRLLNGLAQQMISLANSYKLAV 251
Query: 199 ICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
I TNQ+T T DKN +PALG ++ A +R + H+
Sbjct: 252 ILTNQMT---TKIDKNQAFLVPALGESWGHAATIRLIFHW 288
>gi|126460684|ref|YP_001056962.1| DNA repair and recombination protein RadA [Pyrobaculum calidifontis
JCM 11548]
gi|166218766|sp|A3MXX9.1|RADA_PYRCJ RecName: Full=DNA repair and recombination protein RadA
gi|126250405|gb|ABO09496.1| DNA repair and recombination protein RadA [Pyrobaculum calidifontis
JCM 11548]
Length = 332
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GGI +TE+ G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 101 ISTGVRALDELLGGGIETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEDRGGLGAKAIYID 160
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL--ESQSGFIENKVGMIV 156
TE+ F R+ Q+ + L + + IF Y D + L +++S ++ V ++V
Sbjct: 161 TENTFRPERIMQIAKARGLDPDQALNNIFYARAYS-ADHQMVLVEQAKSLIRQHNVALLV 219
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DS+ FR + + +R + L L+ + + V+ TNQV +
Sbjct: 220 VDSVIAHFRAEFPGRENLAERQQKLNKHIADLLRLADAYDVAVVVTNQVMAQPDVFFGNP 279
Query: 208 MTHSDKNIPALGLTY 222
+ + NI A G TY
Sbjct: 280 LRPAGGNILAHGATY 294
>gi|195108597|ref|XP_001998879.1| GI23388 [Drosophila mojavensis]
gi|193915473|gb|EDW14340.1| GI23388 [Drosophila mojavensis]
Length = 347
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
++++TGS++ D +L GGI G ITE+ G CGKTQ+C + ++ Q+ G LY
Sbjct: 105 VMLTTGSKELDKLLGGGIETGSITEIFGEFRCGKTQICHTLAVTCQLPISQNGGEGKALY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL+ + + + + D + + + ++ +G + E++ +I
Sbjct: 165 IDTEGTFRPERLSAIAQRYNMDEAAVLDNVACARAHNTDQQTQLVQMAAGMMFESRYALI 224
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+
Sbjct: 225 IVDSAMALYRSEYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTA 276
>gi|396482153|ref|XP_003841408.1| similar to meiotic recombination protein dmc1 [Leptosphaeria
maculans JN3]
gi|312217982|emb|CBX97929.1| similar to meiotic recombination protein dmc1 [Leptosphaeria
maculans JN3]
Length = 339
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKD-----LKKKKAFQVGKNPIDMTE--IVVSTGSEKFDSILKGGI 58
+LK+ GF E +V+KVKD L FQ + + I +STGS+ D++L GG
Sbjct: 56 LLKIKGFSEIKVDKVKDALGKCLPSGGGFQTAQELGQHRKRVIRISTGSKALDAVLGGGF 115
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 116 QTMSISEVFGEFRCGKTQLSHTMSVIAQLPKDMGGADGKVAYIDTEGTFRPERIAQIAER 175
Query: 115 SPLAKPKCSDKIFITHC----YEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ D I ++ L + E F+ N+ +++IDSI +FR Y
Sbjct: 176 FGVDPDAAQDNITYARAVNSEHQMELLNKVAEF---FVGNEYRLLIIDSIMALFRVDYTG 232
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L ++ + + V+ TNQV S
Sbjct: 233 RGELNERQQKLNQFLSKLTHVAEEFNVAVLLTNQVQS 269
>gi|115488638|ref|NP_001066806.1| Os12g0497300 [Oryza sativa Japonica Group]
gi|18874073|dbj|BAB85492.1| Rad51 [Oryza sativa Japonica Group]
gi|18874075|dbj|BAB85493.1| Rad51 [Oryza sativa Japonica Group]
gi|108862704|gb|ABA98592.2| DNA repair protein RAD51, putative, expressed [Oryza sativa
Japonica Group]
gi|113649313|dbj|BAF29825.1| Os12g0497300 [Oryza sativa Japonica Group]
Length = 341
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 103 IQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 163 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAIM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R ++ + R + L +L+ + + V+ TNQV +
Sbjct: 223 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVA 274
>gi|134045413|ref|YP_001096899.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis C5]
gi|166218761|sp|A4FWV5.1|RADA_METM5 RecName: Full=DNA repair and recombination protein RadA
gi|132663038|gb|ABO34684.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis C5]
Length = 322
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQ------------- 89
+STGS++ D++L GG+ + +TE +G G GKTQ+ Q C++LQ+++
Sbjct: 80 LSTGSKELDTVLAGGLESQSVTEFAGMYGSGKTQIMHQTCVNLQMAEKIFADLEGVVEEE 139
Query: 90 -PHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
+ +YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 MENPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ + +V+ TNQV
Sbjct: 199 IKGGNNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|452825485|gb|EME32481.1| DNA repair protein isoform 2 [Galdieria sulphuraria]
Length = 312
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V+KV++ K + + +++ E I ++TGS D +L GGI ITE
Sbjct: 37 GLSEAKVDKVRECAYKISNSSFISGLEVRERRKNLIHITTGSSALDELLGGGIETSSITE 96
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQL +C++ Q+ + G V YI TE+ F R+ ++ E L +
Sbjct: 97 VFGEFRSGKTQLAHTLCVTAQLPKSVNGAEGRVAYIDTENCFRPERIVEIAERFELDPEE 156
Query: 122 CSDKIFITHCYEFIDLKRTLESQ--------SGFIENKVGMIVIDSIAGIFRNTYA-EDK 172
D I + Y T E Q + +E G++++DS +FR Y+ +
Sbjct: 157 VLDNILVARAY-------TSEHQIELLVHIAAKMVEETFGLLIVDSATALFRVDYSGRGE 209
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L +LS + + V TNQV S
Sbjct: 210 LSERQQKLNRFMSQLLKLSEQFNLAVFITNQVMS 243
>gi|339234621|ref|XP_003378865.1| DNA repair and recombination protein RadA [Trichinella spiralis]
gi|316978565|gb|EFV61540.1| DNA repair and recombination protein RadA [Trichinella spiralis]
Length = 364
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 124 IQITTGSKELDKLLQGGIETGSITEVFGEFRTGKTQLCHTLAVTCQLPVDMGGGEGKCLY 183
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L+ P D + Y + L S + E++ ++
Sbjct: 184 IDTEGTFRPERLLSVADRFQLSGPDVLDNVAYARAYNTDHQSQLLIQASAMMSESRYALL 243
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SAM 208
++DS ++R Y+ + R + YL L+ + + V+ TNQV +AM
Sbjct: 244 IVDSATALYRTDYSGRGELSARQMHLGRFLRYLLRLADEFGVAVLITNQVVAQVDGGTAM 303
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 304 FQADPKKPIGG 314
>gi|126465874|ref|YP_001040983.1| DNA repair and recombination protein RadA [Staphylothermus marinus
F1]
gi|126014697|gb|ABN70075.1| DNA repair and recombination protein RadA [Staphylothermus marinus
F1]
Length = 319
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS+ D +L GGI ITE G G GKTQ+C Q+ +++Q+ P +G L YI
Sbjct: 85 ITTGSKNLDDLLGGGIETKTITEFFGEYGTGKTQICHQLSVNVQLP-PERGGLSGRAVYI 143
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L + + I+ Y +E F+ E+ V ++V
Sbjct: 144 DTEGTFRWERIEAMARGLGLDPDEVMENIYYQRAYNSDHQIAIVEELFSFVPEHNVKLVV 203
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
IDS+ FR Y + R + H L L+ + I V+ TNQV +
Sbjct: 204 IDSVTSHFRAEYPGRENLAARQQKLNKHLHQLVRLAEAYNIAVVVTNQVMA 254
>gi|313217208|emb|CBY38360.1| unnamed protein product [Oikopleura dioica]
Length = 338
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++FD +L GGI G ITEL G GK+QLC+ + ++ Q+ G LY
Sbjct: 100 VRITTGSKEFDRMLAGGIETGSITELFGEFRTGKSQLCMTLAVTAQLPVDLGGGEGKALY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L + + + E++ ++
Sbjct: 160 IDTEGTFRPERLLAISERYGLSGKDVLDNVAVARAFSTDHQMTMLHTCAAMMTESRYSIM 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS---AMTHS 211
++DSI ++R+ Y+ + R + L +L+ + ++ TNQVT+ M
Sbjct: 220 IVDSIMALYRSDYSGRGELAARQMHLGKFLRGLLKLADTFGVAIVITNQVTANVDGMMMG 279
Query: 212 DKNIPALG 219
D P G
Sbjct: 280 DNQTPVGG 287
>gi|70606517|ref|YP_255387.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius DSM 639]
gi|449066729|ref|YP_007433811.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius N8]
gi|449069003|ref|YP_007436084.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius Ron12/I]
gi|76363310|sp|Q4JAT5.1|RADA_SULAC RecName: Full=DNA repair and recombination protein RadA
gi|68567165|gb|AAY80094.1| DNA recombination protein RadA [Sulfolobus acidocaldarius DSM 639]
gi|449035237|gb|AGE70663.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius N8]
gi|449037511|gb|AGE72936.1| DNA repair and recombination protein RadA [Sulfolobus
acidocaldarius Ron12/I]
Length = 321
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E + D++ K A +V K ++ +I +TGS+ D +L GGI +TE G G GKT
Sbjct: 61 EAREALDIRFKTALEVKKERMNTKKI--TTGSQALDGLLGGGIETRTMTEFFGEFGSGKT 118
Query: 76 QLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFI--- 128
QLC Q+ +S+Q+ Q G+ +YI TE F R+ + + + L + I+
Sbjct: 119 QLCHQISISVQLPQEKGGLNGKAVYIDTEGTFRWERIEAMAKGAGLESDIAMNNIYYMRA 178
Query: 129 ---THCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLA 184
H +D + L ++ I+ +I++DSI FR Y + R +
Sbjct: 179 INSDHQMAIVDDLQELITKDPAIK----LIIVDSITSHFRAEYPGRENLAVRQQKLNKHL 234
Query: 185 HYLHELSIKHRIVVICTNQVTS 206
H L L+ + I VI TNQV +
Sbjct: 235 HQLVRLAEMYDIAVIITNQVMA 256
>gi|296242500|ref|YP_003649987.1| DNA repair and recombination protein RadA [Thermosphaera aggregans
DSM 11486]
gi|296095084|gb|ADG91035.1| DNA repair and recombination protein RadA [Thermosphaera aggregans
DSM 11486]
Length = 326
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS+ D +L GGI ITE G G GKTQ+C Q+ +++Q+ P +G L Y+
Sbjct: 91 ITTGSKSLDDLLGGGIETKTITEFYGEYGSGKTQICHQLSVNVQLP-PERGGLSGKAVYV 149
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L + D IF Y ++ F+ +N V ++V
Sbjct: 150 DTEGTFRWERIEAMARGLGLEPDQVMDNIFYMRAYNSDHQVSIIDDLFTFVPKNDVRLVV 209
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ FR + + +R + H L L+ I V+ TNQV +
Sbjct: 210 VDSVTSHFRAEFPGREHLAERQQKLNAHLHQLMRLAEAFNIAVVVTNQVMA 260
>gi|374327612|ref|YP_005085812.1| protein RadA [Pyrobaculum sp. 1860]
gi|356642881|gb|AET33560.1| RadA [Pyrobaculum sp. 1860]
Length = 333
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L GG+ +TE+ G G GKTQLC Q+ + +Q+ + G+ +YI
Sbjct: 102 ISTGVRALDELLGGGVETRAVTEVVGEFGSGKTQLCHQLAVMVQLPEDRGGLGAKAIYID 161
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE+ F R+ Q+ + L + IF Y D + L Q+ I ++ V ++V
Sbjct: 162 TENTFRPERIMQIAKARGLDPDQALHNIFYARAYSS-DHQMILVDQAKSIIKQHNVALLV 220
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--------A 207
+DS+ FR+ + + +R + L L+ + + V+ TNQV +
Sbjct: 221 VDSVIAHFRSEFPGRENLAERQQKLNKHVADLLRLADAYDVAVVITNQVMAQPDVFFGNP 280
Query: 208 MTHSDKNIPALGLTY 222
+ + NI A G TY
Sbjct: 281 LRPAGGNILAHGATY 295
>gi|2696694|dbj|BAA23984.1| SpDmc1 [Schizosaccharomyces pombe]
Length = 336
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 25/219 (11%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGI 58
+LK+ GF E +V+K+K+ K A ++ +N + I STGSE + IL GGI
Sbjct: 57 LLKIKGFSEAKVDKLKEAASKMCPANFSTAMEISQNRKKVWSI--STGSEALNGILGGGI 114
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ ITE+ G CGKTQ+ +C++ Q+ + G V +I TE F R+ + E
Sbjct: 115 QSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAER 174
Query: 115 SPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
+ + + I ++ Y E+I T+ ++ G + ++++DSI +FR Y
Sbjct: 175 FGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDG----QYRLLIVDSIMALFRVDY 230
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + + L+ +S + + V TNQV +
Sbjct: 231 SGRGELSERQKKLNIMLARLNHISEEFNVAVFVTNQVQA 269
>gi|170591324|ref|XP_001900420.1| Meiotic recombination protein DMC1/LIM15 homolog [Brugia malayi]
gi|158592032|gb|EDP30634.1| Meiotic recombination protein DMC1/LIM15 homolog, putative [Brugia
malayi]
Length = 328
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K++ K +++TE +STGS D +L GGI + ITE
Sbjct: 51 GLSEAKVDKIKEVACKLLNNGFITALEVTERRKLCYRISTGSRDLDKLLGGGIESQAITE 110
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQP---HKG--VLYICTESVFPTARLAQLCELSPLAKP 120
+ G GKTQL +C+ Q++ KG V+YI TE+ F RL Q+ E + +
Sbjct: 111 VFGEFRTGKTQLSHTLCVMCQIASETSNFKGGKVIYIDTENTFRPDRLRQINERFKMDQE 170
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFRNTYA-EDKYVQR 176
D I Y L+ + ++G ++++DSI +FR Y+ + +R
Sbjct: 171 AMLDNILYARAYTSDHQMELLDFVAAKFHEELGIFKLLIVDSIMALFRVDYSGRGELAER 230
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+ + L +++ ++ + V TNQ+T+ P G+T++
Sbjct: 231 QQKLAQMLSRLQKIAEEYNVAVFITNQMTAD--------PGAGMTFQ 269
>gi|356565616|ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog [Glycine max]
Length = 343
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D IL+GG+ G ITEL G GKTQLC +C++ Q+ G +Y
Sbjct: 104 IQITTGSTELDKILEGGVETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 164 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVM 223
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + ++ TNQV S + S
Sbjct: 224 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGS 280
>gi|326426794|gb|EGD72364.1| hypothetical protein PTSG_00384 [Salpingoeca sp. ATCC 50818]
Length = 364
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ST + FD +L GGI +TE GA G GKTQL +Q+ ++ Q+ G V+YI
Sbjct: 82 LSTLTRDFDELLGGGIEPRKLTEFCGAPGAGKTQLAMQLSVNCQLPHAFGGLAGQVVYID 141
Query: 99 TESVFPTARLAQLC-----ELSPLAK---------PKCSDKIFITHCYE---FIDLKRTL 141
TE F R ++ EL P A P + + H + +I+ L
Sbjct: 142 TEGSFMADRFKEIAEHTRSELQPRASRRRKKQAALPSVEEMLEGVHVFRVHNYIEQIAVL 201
Query: 142 ESQSGF-IEN-KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ F I++ +V ++VIDSIA FR + + R + A L L+ +H IVV+
Sbjct: 202 NALPAFQIDHPQVKLVVIDSIAFHFRADFHDMGL--RTRLLNGAAQQLLSLATQHNIVVL 259
Query: 200 CTNQVTSAMTHSDKN-IPALGLTYERA 225
TNQ+T+ + IPALG T+ A
Sbjct: 260 ITNQMTTTIKDGTATLIPALGETWAHA 286
>gi|109157521|pdb|2F1H|A Chain A, Recombinase In Complex With Amp-pnp And Potassium
gi|109157522|pdb|2F1I|A Chain A, Recombinase In Complex With Amp-pnp
gi|109157523|pdb|2F1J|A Chain A, Recombinase In Complex With Adp
Length = 322
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + DS+L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 80 LSTSSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGE 139
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQS 145
V+QP +YI T+ F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 VAQPK--AVYIDTDGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIE 196
Query: 146 GFIE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I+ N + ++VIDS+ FRN Y K +R + L++L+ VV+ TN
Sbjct: 197 DLIQEGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 256
Query: 203 QVTS 206
QV++
Sbjct: 257 QVSA 260
>gi|242085564|ref|XP_002443207.1| hypothetical protein SORBIDRAFT_08g015360 [Sorghum bicolor]
gi|241943900|gb|EES17045.1| hypothetical protein SORBIDRAFT_08g015360 [Sorghum bicolor]
Length = 342
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D IL GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 103 IQLTTGSRELDQILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 163 IDAEGTFRPERLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L +L+ + + V+ TNQV +
Sbjct: 223 VVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVA 274
>gi|170584581|ref|XP_001897076.1| DNA repair protein RAD51 homolog 1 [Brugia malayi]
gi|158595535|gb|EDP34081.1| DNA repair protein RAD51 homolog 1, putative [Brugia malayi]
Length = 363
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 36 IDMTEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV 94
+ +EI+ + TGS + D +L GG+ G ITE+ G GK+QLC + + Q+ G
Sbjct: 114 VKRSEIIQIGTGSRELDRLLGGGVETGSITEIFGEFRTGKSQLCHTLAVMCQLPVDMGGA 173
Query: 95 ----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIE 149
L+I TE F RL + E L+ D + CY ++ +++ + E
Sbjct: 174 EGKCLWIDTEGTFRPERLLAVAERHKLSPQDVLDNVVYARCYNTDHQMQLLVQASAMMAE 233
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++ ++V+DS +FR ++ + M LA YL +LS + + V+ TNQV S
Sbjct: 234 SRYALLVVDSATSLFRTDFSGRGELASRQMM--LAKYLRMLLKLSDEFGVAVVITNQVVS 291
Query: 207 ------AMTHSDKNIPALGLTYERAHDMRDLAHYLHE 237
M + P G A R LA YL +
Sbjct: 292 QVDAGCGMFQGETKKPIGGNIMAHASTTRQLALYLRK 328
>gi|340345410|ref|ZP_08668542.1| DNA repair and recombination protein RadA [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339520551|gb|EGP94274.1| DNA repair and recombination protein RadA [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 387
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLY 96
++TG+ D++ GG+ +TE+ G G GKTQ L++ V +P GVLY
Sbjct: 88 ITTGTNCLDTLFDGGVETQALTEVYGEFGSGKTQFA--HTLAVMVQKPKTEGGLDGGVLY 145
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F R+ + + + K D+I + Y LE I EN + +I
Sbjct: 146 IDTENTFRPERIVSIAQAHEMDPEKVLDRIIVARAYNSAHQTLILEEAGPIIEENNIRLI 205
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V DS G+FR Y R + H L ++ + I TNQV ++
Sbjct: 206 VADSAVGLFRAEYLGRGTLSNRQQKLNHFVHMLSRIAETYNCAAIATNQVMAS 258
>gi|91078458|ref|XP_967492.1| PREDICTED: similar to Dmc1 homolog [Tribolium castaneum]
gi|270004852|gb|EFA01300.1| DMC1/LIM15 [Tribolium castaneum]
Length = 356
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 18/226 (7%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDL--------KKKKAFQVGKNPIDMTEIVVSTGSEKFD 51
M TD++L L F +V+K++++ + AF+V + + +I STGS D
Sbjct: 64 MTTTDKLLALKSFNPSKVSKIQEICGNISFSNRFMTAFEVSEACKQVFKI--STGSANLD 121
Query: 52 SILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV-SQPHKG--VLYICTESVFPTARL 108
+L GG+ + IT++ G +G GKTQ+ +C++ Q+ ++ + G V++I TE F R+
Sbjct: 122 KLLGGGVESMSITQVFGEAGSGKTQIAHTLCVTTQIPTEDYSGGKVMFIDTERSFRPNRI 181
Query: 109 AQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFR 165
Q+ L++ I Y + L++ + G ++++DSI +FR
Sbjct: 182 RQIARRFHLSEDSVLQNILYIRAYNSEHQYQILKNVAVKFHEDTGVFKLLIVDSIIALFR 241
Query: 166 NTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
N + + R + + L ++S ++ + V TNQVT++M +
Sbjct: 242 NDFMGRGVLLNRQQKLAETMSLLKKISEEYNVAVFITNQVTTSMNN 287
>gi|47087371|ref|NP_998577.1| DNA repair protein RAD51 homolog 2 [Danio rerio]
gi|30354420|gb|AAH52122.1| Zgc:56581 [Danio rerio]
Length = 373
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH------KG 93
E+ ST D +L GG+ G +TE++G SGCGKTQLC M LS+ + P G
Sbjct: 76 ELCFSTSLPALDRLLHGGLPRGALTEVTGPSGCGKTQLC--MMLSVLATLPKSLGGLDSG 133
Query: 94 VLYICTESVFPTARLAQLCELS-P---LAKPKCSDKIFITHCYEFID----LKRTLESQS 145
V+YI TES F RL ++ + P K + + H + + LKR +
Sbjct: 134 VIYIDTESAFSAERLVEMAQSRFPEFFSVKERLLEMAARVHLFRELTCQDVLKRLERLEE 193
Query: 146 GFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I + G++++DS+A + R +T R++ + A L LS + I V+ TN
Sbjct: 194 DIIACRAGLVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVLKYLSQEFCIPVVLTN 253
Query: 203 QVTS 206
Q+T+
Sbjct: 254 QITT 257
>gi|424812740|ref|ZP_18237980.1| RecA/RadA recombinase [Candidatus Nanosalinarum sp. J07AB56]
gi|339756962|gb|EGQ40545.1| RecA/RadA recombinase [Candidatus Nanosalinarum sp. J07AB56]
Length = 210
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
VSTGS+ D +L+GG+ G IT G+S GKT LC++ S Q SQ ++ VLYI TE
Sbjct: 7 VSTGSDAIDGLLEGGLEKGVITNFYGSSATGKTNLCVETA-SEQASQ-NRRVLYIDTEGG 64
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
F T R AQ+ + L D + ++ F D + ++ ++V +IV+DS+
Sbjct: 65 FSTERFAQVGDEEDL------DYVELSEPSTF-DAQEDAVREASERADEVDLIVVDSLVA 117
Query: 163 IFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++R + + + + L + + + RI V+ TNQV S
Sbjct: 118 LYRLEATGEDIPEANQRLSSMLAALSKAARESRIPVLVTNQVYS 161
>gi|118355624|ref|XP_001011071.1| DNA repair protein RAD51 containing protein [Tetrahymena
thermophila]
gi|3237383|gb|AAC39117.1| Rad51 [Tetrahymena thermophila]
gi|89292838|gb|EAR90826.1| DNA repair protein RAD51 containing protein [Tetrahymena
thermophila SB210]
Length = 331
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSILKGGIHAGGITE 65
G E +++K+ D+ K FQ + V+ +TGS + D +L GG G +TE
Sbjct: 57 GMTEAKIDKILDVAAKLVPNDFQTAAEYYVKRQSVINLTTGSTELDKLLGGGFETGSLTE 116
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQ+C +C++ Q+ + G +YI TE F RL + E L +
Sbjct: 117 IFGEFRTGKTQICHTLCITCQLPKEKGGGEGKAMYIDTEGTFRPERLESIAERFGLDPQE 176
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
C + + + D + L Q+ + E+K ++++DS ++R Y+ + R +
Sbjct: 177 CMENVAYARAFN-CDQQNKLLVQAAALMAESKYALLIVDSATALYRTDYSGRGELSVRQN 235
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS-----AMTHSDKNIPALG 219
+ L L+ + I V+ TNQV S AM D P G
Sbjct: 236 HLGKFLRNLQRLADEFGIAVVITNQVMSQVDGAAMFAGDMKKPIGG 281
>gi|444321406|ref|XP_004181359.1| hypothetical protein TBLA_0F03010 [Tetrapisispora blattae CBS 6284]
gi|387514403|emb|CCH61840.1| hypothetical protein TBLA_0F03010 [Tetrapisispora blattae CBS 6284]
Length = 332
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 25/214 (11%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V+K+K+ K QVG P +D+ + V +STG+++FD+IL GGI + IT
Sbjct: 57 GLSEIKVDKIKE-AASKIIQVGFIPANVQLDIRKNVFQLSTGAKQFDAILGGGIMSMSIT 115
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQL +C++ Q+ + G V YI TE F R+ Q+ E L
Sbjct: 116 EVFGEFRCGKTQLSHTLCVTTQLPRELGGAEGKVAYIDTEGTFRPERIKQIAERYELDPD 175
Query: 121 KCSDKIFIT------HCYEFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDK 172
C + + H E ++ L L S + +I++DSI FR Y +
Sbjct: 176 ACLENVSYARALNSEHQMELVEQLGEKLSSGA------YRLIIMDSIMANFRVDYCGRGE 229
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L+ L+ + + V TNQV S
Sbjct: 230 LNERQQKLNQHLFKLNRLAEEFNVAVFMTNQVQS 263
>gi|327280368|ref|XP_003224924.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Anolis
carolinensis]
Length = 395
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 20 VKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCL 79
V ++K+K+ NP + + T E D IL GGI G ITE++G SGCGKTQ C+
Sbjct: 67 VYEMKRKRTM----NP---STAFLPTTLEDLDKILHGGIACGSITEITGPSGCGKTQFCI 119
Query: 80 QMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT-----H 130
M L + G V+YI TES F RL ++ + S++ I+ +
Sbjct: 120 MMSLLATLPTSMGGFSGAVIYIDTESAFSAERLIEIAQHR-FPHYFASEEKLISMSSSIY 178
Query: 131 CYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDL 183
Y + LKR + I V ++++DSIA + R +T + +R + +
Sbjct: 179 LYRELTCDGVLKRIESLEEEIISKNVKLVILDSIASVVRKEFDTKLQGNLRERTNLLTKE 238
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTH 210
A L L+ + I VI TNQ+T+ ++
Sbjct: 239 ASILKYLAEEFSIPVILTNQITTWLSE 265
>gi|297527452|ref|YP_003669476.1| DNA repair and recombination protein RadA [Staphylothermus
hellenicus DSM 12710]
gi|297256368|gb|ADI32577.1| DNA repair and recombination protein RadA [Staphylothermus
hellenicus DSM 12710]
Length = 319
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++TGS+ D +L GGI ITE G G GKTQ+C Q+ +S+Q+ P +G L Y+
Sbjct: 85 ITTGSKNLDDLLGGGIETKTITEFYGEYGTGKTQICHQLSVSVQLP-PERGGLAGKAVYV 143
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIV 156
TE F R+ + L + + I+ Y +E F+ E+ ++V
Sbjct: 144 DTEGTFRWERIEAMARGLGLDPDEAMENIYYQRAYNSDHQIAIVEELFSFVPEHDAKLVV 203
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
IDS+ FR Y + R + H L L+ + I V+ TNQV +
Sbjct: 204 IDSVTSHFRAEYPGRENLATRQQKLNKHLHQLVRLAEAYNIAVVVTNQVMA 254
>gi|149635547|ref|XP_001509367.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Ornithorhynchus
anatinus]
Length = 364
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLTKTTEICGGPGVGKTQLCIQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTAR---LAQLC--ELSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R +A C L +A+ ++ I+ C++
Sbjct: 147 VFIDTEGSFLVDRVEAIATACIQHLQLVAESHLEEEQQKALENFSLESILAHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + S F+ +KV ++V+D IA FR+ + D R + LA L L+
Sbjct: 207 YTELLAQIYLLSDFLSEHSKVRLVVVDGIAFPFRHDF--DDLSLRTRLLNGLAQQLISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
H++ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NDHKLAVILTNQMTTKI---DQNQSILVPALGDSWGHAATIRIILHW 308
>gi|1378036|gb|AAC44123.1| RadA [Sulfolobus solfataricus]
Length = 324
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A +V K +++ +I STGS+ D +L GGI +TE G G GKT
Sbjct: 64 EARDALDIRFKTALEVKKERMNVKKI--STGSQALDGLLAGGIETRTMTEFFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKGVL-----YICTESVFPTARLAQLCELSPLAKPKCSDKIF--- 127
QLC Q+ +++Q+ P KG L YI TE F R+ + + L + I+
Sbjct: 122 QLCHQLSVNVQLP-PEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIR 180
Query: 128 ---ITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQ-RAHDMRDL 183
H +D + L S+ I+ +IV+DS+ FR Y + + R +
Sbjct: 181 AINTDHQIAIVDDLQELVSKDPSIK----LIVVDSVTSHFRAEYPGREILAVRQQKLNKH 236
Query: 184 AHYLHELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
H L L+ + I VI TNQV + M + D + G T
Sbjct: 237 LHQLTRLAEVYDIAVIITNQVMARPDMFYGDPTVAVGGHT 276
>gi|209946346|gb|ACI97404.1| spindle B [Drosophila simulans]
Length = 341
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+CL +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLCLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQLCELSPLAKPKCS----DKIFITHCYE-------FIDLKRTLESQSGF 147
TES FP RL Q+ + P+ IF+ + E I+ L Q G
Sbjct: 148 TESSFPARRLLQMSKACEKRHPQMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHG- 206
Query: 148 IENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+G+I+IDS+A IFR + Y+ MR + K+ V+C NQV A
Sbjct: 207 ----IGLIIIDSVAAIFR---LYNXYLXXXXXMRRXXXXXXSYADKYNCAVVCVNQV--A 257
Query: 208 MTHSDKNIPALGLTY 222
IP LGL +
Sbjct: 258 TRDGQDEIPCLGLQW 272
>gi|390343400|ref|XP_788113.2| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 415
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 48 EKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVF 103
E+ D +L GG+ ITE+ GA G GKTQ C+Q+C+ +Q+ GV +YI TE F
Sbjct: 128 EELDEMLGGGVPMCKITEICGAPGVGKTQTCIQLCVDVQIPASLGGVEGEAVYIDTEGSF 187
Query: 104 PTAR--------------LAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE 149
R + EL K I C+ ++L + F+
Sbjct: 188 IPQRAWGIAQAATEHCHTMGDQAELKDFTTEKILSGIHYFRCHNHVELLALVNLLPEFLS 247
Query: 150 N--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
KV +I++DSIA FR+ + D R + LA ++ ++ + V+ TNQ+T+
Sbjct: 248 KNPKVKLIIVDSIAFHFRHDF--DDMSLRTRLLNGLAQNFIRIATQYNLAVVLTNQMTTK 305
Query: 208 MTHSDKN-IPALGLTYERAHDMRDLAHY 234
+ + IPALG ++ A +R + ++
Sbjct: 306 IGEGTSHLIPALGESWGHACTIRVILYW 333
>gi|47933423|gb|AAT39336.1| DNA repair protein RAD51 [Oikopleura dioica]
gi|313216997|emb|CBY38192.1| unnamed protein product [Oikopleura dioica]
gi|313229155|emb|CBY23740.1| unnamed protein product [Oikopleura dioica]
Length = 340
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++FD +L GG+ G ITEL G GK+QLC+ + ++ Q+ G LY
Sbjct: 100 VRITTGSKEFDRMLAGGVETGSITELFGEFRTGKSQLCMTLAVTAQLPVDLGGGEGKALY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L + + + E++ ++
Sbjct: 160 IDTEGTFRPERLLAISERYGLSGKDVLDNVAVARAFSTDHQMTMLHTCAAMMTESRYSIM 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS---AMTHS 211
++DSI ++R+ Y+ + R + L +L+ + ++ TNQVT+ M
Sbjct: 220 IVDSIMALYRSDYSGRGELAARQMHLGKFLRGLLKLADTFGVAIVITNQVTANVDGMMMG 279
Query: 212 DKNIPALG 219
D P G
Sbjct: 280 DNQTPVGG 287
>gi|45201197|ref|NP_986767.1| AGR101Cp [Ashbya gossypii ATCC 10895]
gi|44986051|gb|AAS54591.1| AGR101Cp [Ashbya gossypii ATCC 10895]
gi|374110017|gb|AEY98922.1| FAGR101Cp [Ashbya gossypii FDAG1]
Length = 333
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 38/225 (16%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIH 59
+LK+ GF E +V KVK+ K QVG P +D+ + V +STGS++ DSIL GG+
Sbjct: 53 LLKIKGFSEVKVEKVKE-AAGKIIQVGFIPATVQLDIRKRVFAISTGSKQLDSILGGGVM 111
Query: 60 AGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC--- 112
ITE+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+
Sbjct: 112 TMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGGEGKVAYIDTEGTFRPERIKQIAARY 171
Query: 113 ELSPLAKPKCSDKIFITHCYEFIDLKRTLES--QSGFIE--------NKVGMIVIDSIAG 162
+L P A C E + R L S Q +E ++++DSI
Sbjct: 172 DLDPDA------------CLENVSYARALNSEHQMELVEQLGQELASGDYRLLIVDSIMA 219
Query: 163 IFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y + +R + L+ ++ ++ + V TNQV S
Sbjct: 220 NFRVDYCGRGELNERQQKLNQHLSRLNRVAEEYNVAVFMTNQVQS 264
>gi|356547988|ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Glycine max]
Length = 344
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D IL+GG+ G ITEL G GKTQLC +C++ Q+ G +Y
Sbjct: 105 IQITTGSRELDKILEGGVETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 165 IDAEGTFRPQRLLQIADRFGLNGVDVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVM 224
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + ++ TNQV S + S
Sbjct: 225 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGS 281
>gi|258570589|ref|XP_002544098.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904368|gb|EEP78769.1| predicted protein [Uncinocarpus reesii 1704]
Length = 574
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 23/189 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D L GGI +TE++G SG GKTQL L + LS+Q+ P+ K LY+ T
Sbjct: 106 ISTLDPVLDDALSGGISTSYVTEIAGESGSGKTQLLLHLLLSVQLPPPYGLCKRALYVST 165
Query: 100 ESVFPTARLAQLCELSP--------LAKPKCSDKIFITHCYEFIDLKRT---LESQSGFI 148
E+ T RL+Q+ + P + +P + + IT +DL+ L F
Sbjct: 166 EAGLATNRLSQILDEHPRLSSLPTDVERPSLDNVLGIT----TVDLETQDHILNHHLPFA 221
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKY---VQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+K +G++VIDSI +R + + + RA + L L L+++H I ++ +NQ
Sbjct: 222 ISKYDIGLVVIDSITANYRVETTTNNFSGLLDRAWQFKKLGQLLRNLAVRHNIAIVVSNQ 281
Query: 204 VTSAMTHSD 212
V+ + D
Sbjct: 282 VSDRLNQLD 290
>gi|402899803|ref|XP_003912876.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Papio anubis]
Length = 337
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 147 VFIDTEGSFMVGRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|340624537|ref|YP_004742990.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis X1]
gi|339904805|gb|AEK20247.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis X1]
Length = 322
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 25/185 (13%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP------------ 90
+STGS + D++L GGI + +TE +G G GKTQ+ Q C++LQ+ +
Sbjct: 80 LSTGSTELDTVLAGGIESQSVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADLEGVVEEE 139
Query: 91 --HKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLES----- 143
+YI TE F R+ Q+ E + + D F+ Y D++
Sbjct: 140 LEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 144 -QSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
+SG N + +++IDS+ FRN + K +R + L++L+ + +V+ T
Sbjct: 199 IKSG---NNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVT 255
Query: 202 NQVTS 206
NQV +
Sbjct: 256 NQVAA 260
>gi|45358785|ref|NP_988342.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis S2]
gi|332319828|sp|P0CW59.1|RADA_METMP RecName: Full=DNA repair and recombination protein RadA
gi|45047651|emb|CAF30778.1| DNA repair and recombination protein radA [Methanococcus
maripaludis S2]
Length = 322
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP------------ 90
+STGS + D++L GGI + +TE +G G GKTQ+ Q C++LQ+ +
Sbjct: 80 LSTGSTELDTVLAGGIESQSVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADLEGVVEEE 139
Query: 91 --HKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
+YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 LEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ + +V+ TNQV
Sbjct: 199 IKGGNNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|330915672|ref|XP_003297116.1| hypothetical protein PTT_07429 [Pyrenophora teres f. teres 0-1]
gi|311330355|gb|EFQ94774.1| hypothetical protein PTT_07429 [Pyrenophora teres f. teres 0-1]
Length = 338
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V+KVKD K A ++G+ + I +STGS+ D++L G
Sbjct: 55 LLKIKGFSEIKVDKVKDAIGKCQPSGGGFQTAHELGQQRKRV--IKISTGSKALDAVLGG 112
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 113 GFQTMSISEVFGEFRCGKTQLSHTMSVITQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 172
Query: 113 ELSPLAKPKCSDKIFITHC----YEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
E + D I ++ L + E F+ N+ +++IDSI +FR Y
Sbjct: 173 ERFGVDPETAQDNITYARAVNSEHQMELLNKVAEF---FVSNEYRLLIIDSIMALFRVDY 229
Query: 169 -AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L ++ + + V+ TNQV S
Sbjct: 230 TGRGELNERQQKLNQFLSKLTHVAEEFNVAVLLTNQVQS 268
>gi|390343398|ref|XP_003725868.1| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 415
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 48 EKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVF 103
E+ D +L GG+ ITE+ GA G GKTQ C+Q+C+ +Q+ GV +YI TE F
Sbjct: 128 EELDEMLGGGVPMCKITEICGAPGVGKTQTCIQLCVDVQIPASLGGVEGEAVYIDTEGSF 187
Query: 104 PTAR--------------LAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE 149
R + EL K I C+ ++L + F+
Sbjct: 188 IPQRAWGIAQAATEHCHTMGDQAELKDFTTEKILSGIHYFRCHNHVELLALVNLLPEFLS 247
Query: 150 N--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
KV +I++DSIA FR+ + D R + LA ++ ++ + V+ TNQ+T+
Sbjct: 248 KNPKVKLIIVDSIAFHFRHDF--DDMSLRTRLLNGLAQNFIRIATQYNLAVVLTNQMTTK 305
Query: 208 MTHSDKN-IPALGLTYERAHDMR 229
+ + IPALG ++ A +R
Sbjct: 306 IGEGTSHLIPALGESWGHACTIR 328
>gi|146091679|ref|XP_001470091.1| putative RAD51 protein [Leishmania infantum JPCM5]
gi|398017941|ref|XP_003862157.1| RAD51 protein, putative [Leishmania donovani]
gi|134084885|emb|CAM69283.1| putative RAD51 protein [Leishmania infantum JPCM5]
gi|322500386|emb|CBZ35463.1| RAD51 protein, putative [Leishmania donovani]
Length = 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 136 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMALY 195
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P LA C+ H + + L++ + EN
Sbjct: 196 IDTEGTFRPERLVAVAERYKLDPEDVLANVACARAFNTDHQQQLL-----LQASAMMAEN 250
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKH 194
+ +IV+DS ++R Y+ ++ R + LH L+ ++
Sbjct: 251 RFALIVVDSATALYRTDYSGRNELAARQMHLGKFLRSLHNLAEEY 295
>gi|429964014|gb|ELA46012.1| meiotic recombinase Dmc1 [Vavraia culicis 'floridensis']
Length = 329
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 11 GFQEWEVNKVKDLKKKKA---FQVGKNPIDMTEIVV--STGSEKFDSILKGGIHAGGITE 65
G E +++++K++ K F E VV +TGS D++L GG+ +TE
Sbjct: 59 GLSELKIDRLKEVAGKAVRMDFTTATEYAAKREQVVRIATGSSDLDTLLNGGVQTMSVTE 118
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDK 125
+ G GKTQ+CL +C++ Q+ + K V YI TE F RL ++ + + +
Sbjct: 119 IFGEFRTGKTQICLTLCITAQLHENSK-VAYIDTEGTFRPERLREIATRFDIDQERALQN 177
Query: 126 IFITHCYEF---IDLKRTLESQSGFIENKV-GMIVIDSIAGIFRNTY-AEDKYVQRAHDM 180
+ Y +DL TL ++ F E+ ++VIDS+ +FR + + +R +
Sbjct: 178 VICARAYNSDHQVDLLNTLSAR--FSEDTTYRLLVIDSVIALFRTDFIGRGELGERQQKL 235
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTS 206
L ++ ++ I V+ TNQ+ S
Sbjct: 236 NIFLSRLLRMAEEYNIAVLITNQMMS 261
>gi|150402395|ref|YP_001329689.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis C7]
gi|166218762|sp|A6VGG2.1|RADA_METM7 RecName: Full=DNA repair and recombination protein RadA
gi|150033425|gb|ABR65538.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis C7]
Length = 322
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-------------- 88
+STGS++ D++L GG+ + +TE +G G GKTQ+ Q C++LQ++
Sbjct: 80 LSTGSKELDTVLAGGLESQSVTEFAGMYGSGKTQIMHQSCVNLQIAGKIYADLEGVVEEE 139
Query: 89 QPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
H +YI TE F R+ Q+ E + D F+ Y D++ E
Sbjct: 140 LEHPKAVYIDTEGTFRPERVVQMAEGLGIDGQLVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ + +V+ TNQV
Sbjct: 199 IKGGNNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|340714319|ref|XP_003395677.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Bombus
terrestris]
gi|350417329|ref|XP_003491369.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1
[Bombus impatiens]
gi|350417331|ref|XP_003491370.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 2
[Bombus impatiens]
Length = 341
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ V+TGS + D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 101 VFVTTGSSELDRLLGGGIETGSITEIFGEFRSGKTQLCHTLAVNCQLPIDMGGAEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E +A D + Y + L S + E++ ++
Sbjct: 161 IDTEGTFRPERLIAVAERYKIAGDSVLDNVACARAYNTDHQTQLLIQASAMMTESRYALL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS G++R Y+ + R + L L+ +H + V+ TNQV ++M
Sbjct: 221 IVDSATGLYRTEYSGRGELAARQMHLGRFLRMLLRLADEHGVAVVITNQVVAQVDGAASM 280
Query: 209 THSDKNIPALG 219
D+ P G
Sbjct: 281 FGGDQKKPIGG 291
>gi|162457934|ref|NP_001104919.1| DNA repair protein RAD51 homolog B [Zea mays]
gi|55976630|sp|Q9XED7.1|R51A2_MAIZE RecName: Full=DNA repair protein RAD51 homolog B; AltName:
Full=Rad51-like protein B; Short=RAD51B; AltName:
Full=ZmRAD51b
gi|4886754|gb|AAD32030.1|AF079429_1 RAD51 homolog RAD51B [Zea mays]
gi|223945143|gb|ACN26655.1| unknown [Zea mays]
gi|414878278|tpg|DAA55409.1| TPA: DNA repair protein RAD51-like protein B [Zea mays]
Length = 340
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D IL GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 101 IQLTTGSRELDQILDGGIETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F R+ Q+ + L + + Y R LE+ S +E + ++
Sbjct: 161 IDAEGTFRPQRILQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L +L+ + + V+ TNQV +
Sbjct: 221 VVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVA 272
>gi|225717836|gb|ACO14764.1| DNA repair protein RAD51 homolog 1 [Caligus clemensi]
Length = 346
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I ++TGS++ D +LKGGI G ITEL G GK+QLC + ++ Q+ H G LY
Sbjct: 107 IQITTGSKELDKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLY 166
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + Y + L S + E++ +I
Sbjct: 167 IDTEGTFRPERLLAVAERYSLSGNDVLDNVAYARAYNSDHQSQLLIQASAMMAESRYALI 226
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 227 IVDSSTALYRTDYSGRGELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQVDGAAMF 286
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 287 AADPKKPIGG 296
>gi|255513422|gb|EET89688.1| DNA repair and recombination protein RadA [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 316
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 8/184 (4%)
Query: 29 FQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ 86
F+ G N + + + +ST S+ D ++ GGI ITE+ G GKTQL Q+ ++ Q
Sbjct: 69 FETGTNIAEKRQALGKISTNSKDLDELIGGGIEINAITEVYGKFASGKTQLAFQLAVNAQ 128
Query: 87 VSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE 142
+ + G VL+I TE F R+ ++ + + + I + T+E
Sbjct: 129 LPKDKGGVDGKVLFIDTEGTFRPERIEEIAKAKGIDPKTALENIMVVRATSSEKQMLTIE 188
Query: 143 SQSGFIENK-VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
I K + +I+IDS+ +FR + +R + H L +L+ K+ + V
Sbjct: 189 RADSLIREKGIKLIIIDSLTALFRAEFLGRGALGERQQKLNSHMHKLQQLADKYDVAVYV 248
Query: 201 TNQV 204
TNQV
Sbjct: 249 TNQV 252
>gi|346323849|gb|EGX93447.1| DNA repair protein rhp57 [Cordyceps militaris CM01]
Length = 489
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVL 95
T +ST + D+ L GG+ G ITE +G SG GKTQ L +CL++Q+ P + L
Sbjct: 118 TTPCISTLDDTLDAALGGGVPVGYITEFTGESGAGKTQFLLSLCLAVQLPPPRGLGRQAL 177
Query: 96 YICTESVFPTARLAQLC------ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI- 148
Y+ TE+ T RLAQ+ + P D I T + + LE Q +
Sbjct: 178 YVSTEAGLTTRRLAQMLGGAAAAPDWAASPPPSLDHILSTVTPDLESQEHILEYQVPVLL 237
Query: 149 -ENKVGMIVIDSIAGIFRNTYA--------EDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ +G++V+DS+A +R + R + L +L +L+ +H I V+
Sbjct: 238 ARHDIGLLVLDSVAANYRAEFEGGGLGARLGSGMGARGAQLVRLGAHLRDLARRHGIAVV 297
Query: 200 CTNQV 204
NQV
Sbjct: 298 VANQV 302
>gi|326427949|gb|EGD73519.1| rad51 protein [Salpingoeca sp. ATCC 50818]
Length = 332
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 40 EIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
EIV +S GS++ D++L+GGI G ITE+ G GKTQLC + ++ Q+ G
Sbjct: 91 EIVNISCGSKELDTLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGAEGKC 150
Query: 95 LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVG 153
LYI TE F RL + E L+ D + Y L+ S + E++
Sbjct: 151 LYIDTEGTFRPERLLAVAERYGLSGEDVLDNVAYARAYNSDHQMHLLQQASAMMAESRYA 210
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SA 207
++V+DS +FR Y+ + R + L L+ + I V+ TNQV +A
Sbjct: 211 LMVVDSATALFRTDYSGRGELSARQMALAQFLRTLMRLADEFGIAVVITNQVVAQVDGAA 270
Query: 208 MTHSDKNIPALG 219
M +D P G
Sbjct: 271 MFAADPKKPIGG 282
>gi|406864043|gb|EKD17089.1| meiotic recombination protein dmc1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 339
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 4 TDQMLKL-GFQEWEVNKVKDLKKK--------KAFQVGKNPIDMTEIVVSTGSEKFDSIL 54
T ++LK+ GF + +V K+KD KK A ++G+ I I +STGS++ D+ L
Sbjct: 54 TRRLLKIKGFSDIKVEKIKDAAKKLSPTAGFMTAAELGQ--IRKRCIRISTGSKQLDAAL 111
Query: 55 KGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQ 110
GG I E+ G CGKTQL M + Q+ + G V YI TE F R+A+
Sbjct: 112 NGGFQTMSINEVYGEFRCGKTQLAHTMAVIAQLPKEMGGAEGKVAYIDTEGTFRPERIAE 171
Query: 111 LCELSPLAKPKCSDKIFITHCYEFIDLKRTLES-QSGFIENKVGMIVIDSIAGIFRNTY- 168
+ E + + + I LE + F N+ ++VIDS+ ++R Y
Sbjct: 172 IAERFGVDPDQACENIAYARAQNSEMQTELLEGLAANFATNEYRLLVIDSVMSLYRTDYC 231
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + +++ + +VV+ TNQV S
Sbjct: 232 GRGELSERQQVLGQFLRRATQMAEEFNLVVLMTNQVMS 269
>gi|328788487|ref|XP_624827.3| PREDICTED: DNA repair protein RAD51 homolog 1 [Apis mellifera]
gi|380025667|ref|XP_003696590.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Apis florea]
Length = 341
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ V+TGS + D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 101 VFVTTGSSELDRLLGGGIETGSITEIFGEFRSGKTQLCHTLAVNCQLPIDMGGAEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E +A D + Y + L S + E++ ++
Sbjct: 161 IDTEGTFRPERLIAVAERYKIAGDSVLDNVACARAYNTDHQTQLLIQASAMMTESRYALL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS G++R Y+ + R + L L+ +H + V+ TNQV ++M
Sbjct: 221 IVDSATGLYRTEYSGRGELAARQMHLGRFLRMLLRLADEHGVAVVITNQVVAQVDGAASM 280
Query: 209 THSDKNIPALG 219
D+ P G
Sbjct: 281 FGGDQKKPIGG 291
>gi|348573117|ref|XP_003472338.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cavia
porcellus]
Length = 440
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 17/180 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
+ST D L GGI G +TE++G GCGKTQ C+ M + L P+ G V+YI
Sbjct: 83 LSTTLSALDEALHGGIACGSLTEITGPPGCGKTQFCMMMSV-LATLPPNMGGLEGAVVYI 141
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFIDLKRTLES----QSGFIE 149
TES F RL ++ E +K+ +T + Y + ++ L+ + I
Sbjct: 142 DTESAFSAERLIEIAESRFPRYFNTEEKLLLTSTKVYVYRELTCEKVLQRIESLEEEIIS 201
Query: 150 NKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+V +++IDSIA + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 202 KRVKVVIIDSIASVVRKEFDTQLQGNMKERNKFLAKGASLLKYLAEEFSIPVILTNQITT 261
>gi|114228441|gb|ABI58231.1| Rad51 protein [Oryza sativa Indica Group]
Length = 332
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL GGI G ITE+ G GKTQLC +C++ Q+ H G LY
Sbjct: 94 IQVTTGSRELDKILDGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDHGGGEGKALY 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F R Q+ + L + + Y R L + S +E + ++
Sbjct: 154 IDAEGTFRPQRFLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLGAASMMVETRFAIM 213
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R ++ + R + L +L+ + + V+ TNQV +
Sbjct: 214 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVA 265
>gi|112419535|dbj|BAF02935.1| RAD51 homolog [Populus nigra]
Length = 342
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS + D IL+GG+ G ITE+ G GKTQLC +C++ Q+ G +Y
Sbjct: 103 IQITSGSRELDKILEGGVETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 163 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 223 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
>gi|311698172|gb|ADQ00380.1| Dmc1 [Pneumocystis carinii]
gi|311698174|gb|ADQ00381.1| Dmc1 [Pneumocystis carinii]
Length = 336
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
GF E +V K+K++ +K FQ V +STGS++FD++L GGI + ITE
Sbjct: 62 GFSEAKVEKLKEIAQKLCPPPFQTAMEVSSFRRRVNYISTGSKQFDAMLGGGIQSMSITE 121
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G CGKTQ+ MC++ Q+ + G Y+ TE F R+ + + +
Sbjct: 122 VFGEFRCGKTQISHTMCVTCQLPKEMGGAEGKAAYLDTEGTFRPDRIKSIAARFGVDAEQ 181
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
+ I + + + I+ T+ S+ G + ++++DSI +FR Y+ +
Sbjct: 182 AMNNILVGRAFNSEHQMDLINKMCTIFSEDG----RYRLLIVDSIMALFRVDYSGRGELS 237
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++ ++ I V TNQV +
Sbjct: 238 ERQQKLNIMLSRLTRIAEEYNIAVFLTNQVQA 269
>gi|115461801|ref|NP_001054500.1| Os05g0121700 [Oryza sativa Japonica Group]
gi|54287477|gb|AAV31221.1| putative DNA repair protein RAD51 [Oryza sativa Japonica Group]
gi|113578051|dbj|BAF16414.1| Os05g0121700 [Oryza sativa Japonica Group]
gi|215741250|dbj|BAG97745.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741600|dbj|BAG98095.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195995|gb|EEC78422.1| hypothetical protein OsI_18249 [Oryza sativa Indica Group]
gi|222630019|gb|EEE62151.1| hypothetical protein OsJ_16938 [Oryza sativa Japonica Group]
Length = 363
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 14/177 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++T D L GGI AG +TE+ G SG GKTQ CL++ L + + + G VLYI
Sbjct: 82 LATTLRGLDEALHGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYID 141
Query: 99 TESVFPTARLAQLCELS--------PLAKPKCSDKIFITHCYEFIDLKRTLES-QSGFIE 149
TES F + R+ ++ E S LA+ K + +I + + ++LE + ++
Sbjct: 142 TESKFSSRRMIEIGEKSFPQIFRQEGLAQ-KMAGRILVLRPTSLSEFTKSLEQMKVTLLQ 200
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ V ++V+DS+A + + + R H +R +L ++ +I V+ TNQV S
Sbjct: 201 HDVKLLVVDSMAALMSSEIEKSATGLRQHPLRWALSFLKSIAEFSQIPVVVTNQVRS 257
>gi|311698168|gb|ADQ00378.1| Dmc1 [Pneumocystis murina]
gi|311698170|gb|ADQ00379.1| Dmc1 [Pneumocystis murina]
Length = 336
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
GF E +V K+K++ +K FQ V +STGS++FD++L GGI + ITE
Sbjct: 62 GFSEAKVEKLKEIAQKLCPPPFQTAMEVSSFRRRVNYISTGSKQFDAMLGGGIQSMSITE 121
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G CGKTQ+ MC++ Q+ + G Y+ TE F R+ + + +
Sbjct: 122 VFGEFRCGKTQISHTMCVTCQLPKEMGGAEGKAAYLDTEGTFRPDRIKSIAARFGVDAEQ 181
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
+ I + + + I+ T+ S+ G + ++++DSI +FR Y+ +
Sbjct: 182 AMNNILVGRAFNSEHQMDLINKMCTIFSEDG----RYRLLIVDSIMALFRVDYSGRGELS 237
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++ ++ I V TNQV +
Sbjct: 238 ERQQKLNIMLSRLTRIAEEYNIAVFLTNQVQA 269
>gi|219119366|ref|XP_002180445.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407918|gb|EEC47853.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 350
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K++ K K D E + ++TGS + D +L+GG+ G ITE
Sbjct: 77 GISEAKVLKLKEITKSMVPMDFKTAADALEDRKALVTLTTGSIELDKLLEGGVETGSITE 136
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQLC +C++ Q++ G +YI TE F RL + E L
Sbjct: 137 VFGEFRTGKTQLCHTLCVTCQMAVTEGGAEGKAIYIDTEGTFRPNRLQAIAERFGLDPTV 196
Query: 122 CSDKIFIT------HCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYV 174
+ + H E + L + SQ ++ ++V+DS +FR Y +
Sbjct: 197 ALENVAYARAHNSEHQAELLKLAAAIMSQ-----DRYALLVVDSATALFRTDYTGRGELS 251
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R M L L+ + + V TNQV +
Sbjct: 252 ERQMQMAQFLRQLTRLAEEFGVAVFITNQVVA 283
>gi|255718721|ref|XP_002555641.1| KLTH0G14014p [Lachancea thermotolerans]
gi|238937025|emb|CAR25204.1| KLTH0G14014p [Lachancea thermotolerans CBS 6340]
Length = 333
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 38/225 (16%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNP------IDMTEIVVSTGSEKFDSILKGGIH 59
+LK+ G E +V KVK+ K QVG P I +STGS++ DS+L GG+
Sbjct: 53 LLKIKGLSEVKVEKVKE-AAGKIIQVGFIPATIQADIRKRVFAISTGSKQLDSVLGGGVM 111
Query: 60 AGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC--- 112
ITE+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+
Sbjct: 112 TMSITEVFGEFRCGKTQMSHTLCVTAQLPRELGGGEGKVAYIDTEGTFRPERIKQIAARY 171
Query: 113 ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQ----------SGFIENKVGMIVIDSIAG 162
+L P A C E + R L S+ S + ++++DSI
Sbjct: 172 DLDPEA------------CLENVSYARALNSEHQMELTEQLGSELSSGEYRLLIVDSIMA 219
Query: 163 IFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y + +R + L+ +S ++ I V TNQV S
Sbjct: 220 NFRVDYCGRGELNERQQKLNQHLSRLNRISEEYNIAVFMTNQVQS 264
>gi|212546047|ref|XP_002153177.1| meiotic recombination protein (Dmc1), putative [Talaromyces
marneffei ATCC 18224]
gi|111380644|gb|ABH09699.1| DMC1-like protein [Talaromyces marneffei]
gi|210064697|gb|EEA18792.1| meiotic recombination protein (Dmc1), putative [Talaromyces
marneffei ATCC 18224]
Length = 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIV--------VSTGSEKFDSILKGG 57
+LK+ GF E +V K+KD +K I E+ +STGS++FD+IL GG
Sbjct: 54 LLKIKGFSEIKVEKIKD-AIQKCLPTANGFITAIELCHQRKKVFKISTGSKQFDTILGGG 112
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 113 FQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYIDTEGTFRPDRIAQIAE 172
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA- 169
L + I ++L TL + F + ++VIDSI FR ++
Sbjct: 173 RYGLDAESTQENISYARALNSEHQLELLNTLSKE--FAGGQYRLLVIDSIMNCFRVDFSG 230
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L L+ + + V+ TNQV S
Sbjct: 231 RGELAERQQKLNQFLIRLSHLAEEFNVCVLMTNQVQS 267
>gi|448577994|ref|ZP_21643429.1| DNA repair and recombination protein RadB [Haloferax larsenii JCM
13917]
gi|445726535|gb|ELZ78151.1| DNA repair and recombination protein RadB [Haloferax larsenii JCM
13917]
Length = 257
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+ P +TE VSTG + D +L GG G +T++ G GKT + L +++V+
Sbjct: 24 RTPFVVTE-PVSTGCKPLDDLLDGGFERGTVTQVYGPPAAGKTNVAL--SAAVRVAAEGG 80
Query: 93 GVLYICTESVFPTARLAQLCE-LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK 151
V+YI TE + R QL E ++P + ++ I+ Y+F D ++ + S F E +
Sbjct: 81 TVVYIDTEGL-SVDRFQQLAEAVAPGDVEAVTSRLMISEAYDFEDQEQAVRDASEFAE-Q 138
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYL-HELSI--KHRIVVICTNQVTS 206
+IV+DS G +R A + +R +A + H LSI KH I V+ TNQV S
Sbjct: 139 ADLIVVDSATGFYRLERAGEG--DGGETLRRVARQVTHLLSIARKHDIAVVLTNQVYS 194
>gi|6321027|ref|NP_011106.1| Dmc1p [Saccharomyces cerevisiae S288c]
gi|118683|sp|P25453.1|DMC1_YEAST RecName: Full=Meiotic recombination protein DMC1
gi|171401|gb|AAA34571.1| Dmc1, partial [Saccharomyces cerevisiae]
gi|287608|dbj|BAA01637.1| hypothetical protein [Saccharomyces cerevisiae]
gi|603420|gb|AAB64706.1| Dmc1p: DNA repair protein [Saccharomyces cerevisiae]
gi|151944897|gb|EDN63156.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405735|gb|EDV09002.1| meiotic recombination protein DMC1 [Saccharomyces cerevisiae
RM11-1a]
gi|259146109|emb|CAY79369.1| Dmc1p [Saccharomyces cerevisiae EC1118]
gi|285811814|tpg|DAA07842.1| TPA: Dmc1p [Saccharomyces cerevisiae S288c]
gi|349577841|dbj|GAA23009.1| K7_Dmc1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299885|gb|EIW10977.1| Dmc1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|446776|prf||1912300A ISC2 gene
Length = 334
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K QVG P +D+ + V +STGS++ DSIL GGI IT
Sbjct: 59 GLSEVKVEKIKE-AAGKIIQVGFIPATVQLDIRQRVYSLSTGSKQLDSILGGGIMTMSIT 117
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC---ELSP- 116
E+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+ EL P
Sbjct: 118 EVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPE 177
Query: 117 --LAKPKCSDKIFITHCYEFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDK 172
LA + + H E ++ L L S +IV+DSI FR Y +
Sbjct: 178 SCLANVSYARALNSEHQMELVEQLGEELSS------GDYRLIVVDSIMANFRVDYCGRGE 231
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L+ L+ + + V TNQV S
Sbjct: 232 LSERQQKLNQHLFKLNRLAEEFNVAVFLTNQVQS 265
>gi|290462499|gb|ADD24297.1| DNA repair protein RAD51 homolog 1 [Lepeophtheirus salmonis]
Length = 350
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I ++TGS++ D +LKGGI G ITEL G GK+QLC + ++ Q+ H G LY
Sbjct: 111 IQITTGSKELDKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLY 170
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + Y + L S + E++ +I
Sbjct: 171 IDTEGTFRPERLLAVAERYNLSGNDVLDNVAYARAYNSDHQSQLLIQASAMMAESRYALI 230
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 231 IVDSSTALYRTDYSGRGELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQVDGAAMF 290
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 291 SADPKKPIGG 300
>gi|297272693|ref|XP_001104781.2| PREDICTED: DNA repair protein RAD51 homolog 3-like [Macaca mulatta]
Length = 337
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|440493420|gb|ELQ75893.1| Meiotic recombination protein Dmc1, partial [Trachipleistophora
hominis]
Length = 335
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +++++K++ K I+ + ++TGS D++L GG+ +TE
Sbjct: 65 GLSEPKIDRLKEVASKAVRMDFTTAIEYAAKREQVVRITTGSSDLDALLNGGVQTMSVTE 124
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDK 125
+ G GKTQ+CL +C++ Q+ + K V YI TE F RL ++ + + +
Sbjct: 125 IFGEFRTGKTQICLTLCITAQLQENSK-VAYIDTEGTFRPERLREIAARFDIDQEQALQN 183
Query: 126 IFITHCYEF---IDLKRTLESQSGFIENKV-GMIVIDSIAGIFRNTY-AEDKYVQRAHDM 180
+ Y +DL TL ++ F ++ +++IDS+ +FR + + +R +
Sbjct: 184 VICARAYNSDHQVDLLNTLSAR--FSDDPTYRLLIIDSVIALFRTDFIGRGELGERQQKL 241
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTS 206
L ++ ++ I V+ TNQ+ S
Sbjct: 242 NIFLSRLQRMAEEYNIAVLITNQMMS 267
>gi|332246456|ref|XP_003272370.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Nomascus leucogenys]
Length = 337
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLHLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|37625015|gb|AAQ96331.1| RAD51 protein [Leishmania donovani]
Length = 377
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 137 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMALY 196
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P LA C+ H + + L++ + EN
Sbjct: 197 IDTEGTFRPERLVAVAERYKLDPEDVLANVACARAFNTDHQQQLL-----LQASAMMAEN 251
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKH 194
+ +I++DS ++R Y+ ++ R + LH L+ ++
Sbjct: 252 RFALIIVDSATALYRTDYSGRNELAARQMHLGKFLRSLHNLAEEY 296
>gi|289192763|ref|YP_003458704.1| DNA repair and recombination protein RadA [Methanocaldococcus sp.
FS406-22]
gi|288939213|gb|ADC69968.1| DNA repair and recombination protein RadA [Methanocaldococcus sp.
FS406-22]
Length = 324
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------V 87
+STGS+ D IL GG+ + +TE +G G GKTQ+ Q C++LQ +
Sbjct: 83 LSTGSKNLDEILGGGLESQSVTEFAGMFGSGKTQIAHQACVNLQCPDRIIADDSIKDEIL 142
Query: 88 SQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF 147
++P +YI TE F R+ Q+ E L + + IF+ Y E+
Sbjct: 143 NEPK--AVYIDTEGTFRPERIIQMAEALGLDGKEVLNNIFVARAYNSDMQMLYAENVENL 200
Query: 148 IEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I + +I++DS+ FR Y K +R + L++L+ + VVI TNQV
Sbjct: 201 IREGHNIKLIIVDSLTSTFRTEYIGRGKLAERQQKLGRHMATLNKLADLYNCVVIVTNQV 260
Query: 205 TS 206
+
Sbjct: 261 AA 262
>gi|157871568|ref|XP_001684333.1| putative RAD51 protein [Leishmania major strain Friedlin]
gi|3132709|gb|AAC16334.1| Rad51 homolog [Leishmania major]
gi|68127402|emb|CAJ05032.1| putative RAD51 protein [Leishmania major strain Friedlin]
Length = 377
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 137 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMALY 196
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P LA C+ H + + L++ + EN
Sbjct: 197 IDTEGTFRPERLVAVAERYKLDPEDVLANVACARAFNTDHQQQLL-----LQASAMMAEN 251
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKH 194
+ +I++DS ++R Y+ ++ R + LH L+ ++
Sbjct: 252 RFALIIVDSATALYRTDYSGRNELAARQMHLGKFLRSLHNLAEEY 296
>gi|154340265|ref|XP_001566089.1| putative RAD51 protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063408|emb|CAM39587.1| putative RAD51 protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 374
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 134 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMALY 193
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P LA C+ H + + L++ + EN
Sbjct: 194 IDTEGTFRPERLVAVAERYKLDPEDVLANVACARAFNTDHQQQLL-----LQASAMMAEN 248
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKH 194
+ +I++DS ++R Y+ ++ R + LH L+ ++
Sbjct: 249 RFALIIVDSATALYRTDYSGRNELAARQMHLGKFLRSLHNLAEEY 293
>gi|435852217|ref|YP_007313803.1| DNA repair and recombination protein RadB [Methanomethylovorans
hollandica DSM 15978]
gi|433662847|gb|AGB50273.1| DNA repair and recombination protein RadB [Methanomethylovorans
hollandica DSM 15978]
Length = 217
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 11/168 (6%)
Query: 45 TGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFP 104
+G + D +L GG+ AG +T+ G +G GKT LCLQ L+++ + K V+ I TE + P
Sbjct: 2 SGCKSVDDLLAGGLEAGVVTQFFGEAGSGKTNLCLQ--LAIRCVEQGKKVIIIDTEGISP 59
Query: 105 TARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIF 164
+ R Q+ AK + + +I I + F + + I+ +G+I++DS +
Sbjct: 60 S-RFRQIA--GDRAK-EIAQQIIIYEPHNFEEQHAAVRELEKVIKENIGLIIVDSATAFY 115
Query: 165 RNTYAEDKYVQRAHDMRDLAH---YLHELSIKHRIVVICTNQVTSAMT 209
R +D RA R+L +LH L+ K+ I V+ TNQV + +T
Sbjct: 116 RFELEQDDSAMRAR--RELGSQIGFLHSLARKYGISVVITNQVYTDIT 161
>gi|255070105|ref|XP_002507134.1| Rad51 DNA recombinase 3 [Micromonas sp. RCC299]
gi|226522409|gb|ACO68392.1| Rad51 DNA recombinase 3 [Micromonas sp. RCC299]
Length = 362
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 32/213 (15%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VL 95
++ V T S+ D +L GG+ G ITEL G G GKTQ C+Q+C+S+Q+ G +
Sbjct: 98 KLAVFTFSKDLDDLLGGGVAVGEITELCGCPGIGKTQACMQLCVSVQMPGAFGGYEGSAV 157
Query: 96 YICTESVFPTARLAQLCE----------------------LSPLAKPKCSDKIFITHCYE 133
YI TE F R ++ + LS + D++ + C+E
Sbjct: 158 YIDTEGSFMAERAKEVAQATVSHLVSISQFLPKHLSESGALSQFTVNEILDRVHLFRCHE 217
Query: 134 FIDLKRTLESQSGFIE-NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSI 192
+L +ES ++ + V ++VIDS+A FR + + R + + L L+
Sbjct: 218 ITELLAVVESLPMYVRAHGVKLVVIDSMAFHFRQDFKD--MALRTAILAKMTTQLLNLAK 275
Query: 193 KHRIVVICTNQVT---SAMTHSDKNIPALGLTY 222
+ V+ NQ+T + + +PALG +Y
Sbjct: 276 SEHLAVVSVNQITVKPDPASGVARLVPALGESY 308
>gi|229597842|pdb|3ETL|A Chain A, Rada Recombinase From Methanococcus Maripaludis In Complex
With Amppnp
gi|229597843|pdb|3EW9|A Chain A, Rada Recombinase From Methanococcus Maripaludis In Complex
With Amppnp And Potassium Ions
gi|229597844|pdb|3EWA|A Chain A, Rada Recombinase From Methanococcus Maripaludis In Complex
With Amppnp And Ammonium Ions
Length = 322
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP------------ 90
+STGS + D++L GGI + +TE +G G GKTQ+ Q C++LQ+ +
Sbjct: 80 LSTGSTELDTVLAGGIESQSVTEFAGMFGSGKTQIMHQTCVNLQMREKIFADLEGVVEEE 139
Query: 91 --HKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
+YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 LEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ + +V+ TNQV
Sbjct: 199 IKGGNNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|261403509|ref|YP_003247733.1| DNA repair and recombination protein RadA [Methanocaldococcus
vulcanius M7]
gi|261370502|gb|ACX73251.1| DNA repair and recombination protein RadA [Methanocaldococcus
vulcanius M7]
Length = 320
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------V 87
+STGS+ D IL GG+ + ITE +G G GKTQ+ Q C++LQ +
Sbjct: 79 LSTGSKNLDEILGGGLESQSITEFAGMFGSGKTQIAHQACVNLQCPDKIIADDSIKEEVL 138
Query: 88 SQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF 147
++P +YI TE F R+ Q+ E L IF+ Y E+
Sbjct: 139 NEPK--AVYIDTEGTFRPERIIQMAEALGLDGQDVLKNIFVARAYNSDMQMLYAENVENL 196
Query: 148 IEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I V +++IDS+ FR Y K +R + L++L+ + VVI TNQV
Sbjct: 197 IREGHNVKLVIIDSLTSTFRTEYVGRGKLAERQQKLGRHMAMLNKLADLYNCVVIVTNQV 256
Query: 205 TS 206
+
Sbjct: 257 AA 258
>gi|384490394|gb|EIE81616.1| DNA repair protein RAD51 [Rhizopus delemar RA 99-880]
Length = 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I ++TGS+ D +L GG+ G ITE+ G GK+Q C M ++ Q+ G L+
Sbjct: 94 ITITTGSKALDGLLGGGVETGSITEIFGEFRTGKSQFCHTMAVTAQLPLEMGGAQGKCLF 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE+ F R+ + + L P D I Y D + +L Q+ + E + +
Sbjct: 154 IDTENSFRPNRILSIAQRYSLNGPDTLDNIAYARAYN-TDQQTSLLVQAAAMMAETRFAL 212
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS------A 207
+++DS ++R Y + R + + L L+ + + VI TNQV + +
Sbjct: 213 LIVDSAIALYRTDYVGRGELAARQNHLAQFLRRLQRLADEFGVAVIITNQVVAQVDNSVS 272
Query: 208 MTHSDKNIPALG 219
M + D PA G
Sbjct: 273 MFNPDPKKPAGG 284
>gi|307595014|ref|YP_003901331.1| Rad51 domain-containing protein [Vulcanisaeta distributa DSM 14429]
gi|307550215|gb|ADN50280.1| Rad51 domain protein [Vulcanisaeta distributa DSM 14429]
Length = 318
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I + T D +L+GG+ I E +G G GKTQLC Q+ +++Q+SQ GV +Y
Sbjct: 83 IRLRTNVRAIDDLLQGGLEPKAIYEFAGEFGTGKTQLCHQLSVTVQLSQDKGGVGGAAVY 142
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQ-SGFIEN-KVGM 154
+ TE F R+ + + L + D I++ DL+ ++ +E +
Sbjct: 143 LDTEEAFSPNRIVNIAQRFDLDPNEALDNIYVIKVINAADLEDRIKFDVVKLVEQANAKL 202
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA-MTHSD 212
IV+DSI ++R + ++ +R + + +L ++ + + V+ TNQV M + +
Sbjct: 203 IVVDSIIALYRAEFKGRERLAERQQRLNYILDWLMRIAKVYNVYVVLTNQVLDVPMGYIE 262
Query: 213 KNIPALG 219
PA G
Sbjct: 263 VKRPAGG 269
>gi|410980625|ref|XP_003996677.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Felis catus]
Length = 337
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAK-------PKCSDK---------IFITHCYE 133
++I TE F R+ L L +A+ PK + I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLHLIAEAHMGEEHPKALEDFTLENILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R+ + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRSRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ V+ TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVLLTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 308
>gi|256811072|ref|YP_003128441.1| DNA repair and recombination protein RadA [Methanocaldococcus
fervens AG86]
gi|256794272|gb|ACV24941.1| DNA repair and recombination protein RadA [Methanocaldococcus
fervens AG86]
Length = 320
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------V 87
+STGS+ D IL GG+ + +TE +G G GKTQ+ Q C++LQ +
Sbjct: 79 LSTGSKNLDEILGGGLESQSVTEFAGMFGSGKTQIAHQACVNLQCPERIIADDAIKEEIL 138
Query: 88 SQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF 147
++P +YI TE F R+ Q+ E L + + IF+ Y E+
Sbjct: 139 NEPK--AVYIDTEGTFRPERIVQMAEALGLDGQEVLNNIFVARAYNSDMQMLYAENVENL 196
Query: 148 IEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I + ++++DS+ FR Y K +R + L++L+ + VVI TNQV
Sbjct: 197 IREGHNIKLVIVDSLTSTFRTEYVGRGKLAERQQKLGRHMATLNKLADLYNCVVIVTNQV 256
Query: 205 TS 206
+
Sbjct: 257 AA 258
>gi|295657668|ref|XP_002789400.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283822|gb|EEH39388.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 594
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST D+ L GGI G +TE +G SG GKTQ L + LS+Q+ P+ + LY T
Sbjct: 134 ISTLDPVLDAALAGGISTGYVTEFAGESGSGKTQFLLHLLLSVQLPPPYGTSRKALYFST 193
Query: 100 ESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIV- 156
ES PT RL+QL E PL P+ S + + + + LE+Q + K +
Sbjct: 194 ESDLPTGRLSQLLEDHPLLSTLPEASARPSLENILSITTID--LETQDHILNIKFQLRCH 251
Query: 157 ---IDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
D+++G+ RA ++ L +L L+ K I ++ NQV+ + D
Sbjct: 252 ESDSDNVSGLL----------ARAWQLKKLGRFLRNLAAKENIAIVVANQVSDQIQMDD 300
>gi|395748906|ref|XP_003778851.1| PREDICTED: DNA repair protein RAD51 homolog 3 isoform 2 [Pongo
abelii]
Length = 337
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T T DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMT---TKIDKNQALLVPALGESWGHAATIRLIFHW 308
>gi|357130009|ref|XP_003566651.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Brachypodium
distachyon]
Length = 364
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++T D L GGI G +TE+ G SG GKTQ CL++ L + + + G V+YI
Sbjct: 83 LATTLRGLDEALGGGIPVGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVVYID 142
Query: 99 TESVFPTARLAQLCELS--------PLAKPKCSDKIFITHCYEFIDLKRTLES-QSGFIE 149
TES F + R+ ++ + S LA+ K + +I + D ++LE + ++
Sbjct: 143 TESKFSSRRMIEIGQKSIPQIFRQEGLAQ-KMTGRILVMRPTSLSDFTKSLEQMKVTLLQ 201
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
N V ++++DS+A + + H +R +L ++ RI VI TNQV S
Sbjct: 202 NDVKLLIVDSMAALMSTENERGASDRTQHPLRWALSFLKSIAEFSRIPVIVTNQVRS 258
>gi|344273519|ref|XP_003408569.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Loxodonta africana]
Length = 386
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVSQPHK 92
D++ +ST D L GG+ G +TE++G GCGKTQ C+ M L +
Sbjct: 77 DLSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSVLATLPTNMGGLEG 136
Query: 93 GVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQ 144
V YI TES F RL ++ E +K+ +T H Y + L+R +
Sbjct: 137 AVAYIDTESAFSAERLVEIAESRFPEYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
I V +++IDS+A + R +T + +R+ + A L L+ + I VI T
Sbjct: 197 EEIISKGVKLVIIDSVASVVRKEFDTQLQGNMKERSKFLAREAASLKYLAEEFSIPVILT 256
Query: 202 NQVTSAMTHS 211
NQ+T+ ++ +
Sbjct: 257 NQITTHLSRT 266
>gi|449269848|gb|EMC80589.1| DNA repair protein RAD51 like protein 3, partial [Columba livia]
Length = 327
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D+ L GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV ++I TE F
Sbjct: 59 LDNTLGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMV 118
Query: 106 ARLA-------QLCELSPLAKPKCS--------------DKIFITHCYEFIDLKRTLESQ 144
R+A Q C+L A+ + I+ C ++I+L +
Sbjct: 119 DRVADIAAACVQHCQLIAQAQQEEDHLKALETFSLESILSHIYYFRCRDYIELLAQVYLL 178
Query: 145 SGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
F+ +KV ++V+D IA FR+ + ED + R + LA L ++ H+ V+ TN
Sbjct: 179 PDFLSEHSKVRLVVLDGIAFPFRHDF-EDLSL-RTRLLNGLAQQLIIIANDHKSAVVLTN 236
Query: 203 QVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
Q+T+ S +PALG ++ A +R + H+
Sbjct: 237 QMTTRFGQSQPMLVPALGESWGHAATVRLILHW 269
>gi|363751170|ref|XP_003645802.1| hypothetical protein Ecym_3507 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889436|gb|AET38985.1| Hypothetical protein Ecym_3507 [Eremothecium cymbalariae
DBVPG#7215]
Length = 334
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 38/225 (16%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIH 59
+LK+ GF E +V KVK+ K QVG P +D+ + V +STGS++ DSIL GG+
Sbjct: 54 LLKIKGFSEVKVEKVKE-AAGKIIQVGFIPATVQLDIRKRVFSISTGSKQLDSILGGGVM 112
Query: 60 AGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC--- 112
ITE+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+
Sbjct: 113 TMSITEVFGEFRCGKTQMSHTLCVTAQLPRELGGGEGKVAYIDTEGTFRPERIKQIAARY 172
Query: 113 ELSPLAKPKCSDKIFITHCYEFIDLKRTLES--QSGFIE--------NKVGMIVIDSIAG 162
EL P C E + R L S Q +E + ++++DSI
Sbjct: 173 ELDP------------DICLENVSYARALNSEHQMELVEQLGQQLSSGEYRLLIVDSIMA 220
Query: 163 IFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y + +R + L+ ++ + + V TNQV S
Sbjct: 221 NFRVDYCGRGELNERQQRLNQHLSRLNRIAEDYNVAVFMTNQVQS 265
>gi|427789927|gb|JAA60415.1| Putative meiotic recombination protein dmc1 [Rhipicephalus
pulchellus]
Length = 337
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D +L GGI G ITE+ G GKTQLC + ++ Q+ H G LY
Sbjct: 98 VQITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHMLAVTCQLPIEHSGGEGKCLY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L+ P D + Y + L S + E + ++
Sbjct: 158 IDTEGTFRPERLLAVADKYGLSGPDVLDNVAYARAYNSDHQTQLLIQASAMMAETRYALL 217
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 218 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVLITNQVVAQVDGAAMF 277
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 278 SADPKKPIGG 287
>gi|159469155|ref|XP_001692733.1| DNA recombination protein [Chlamydomonas reinhardtii]
gi|45685351|gb|AAS75433.1| putative DNA repair protein RAD51 [Chlamydomonas reinhardtii]
gi|158277986|gb|EDP03752.1| DNA recombination protein [Chlamydomonas reinhardtii]
Length = 343
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TG ++ D+IL+GGI G ITE+ G CGKTQLC +C++ Q+ G +Y
Sbjct: 103 ISITTGCKELDTILEGGIETGSITEIYGEYRCGKTQLCHTLCVTCQLPVEMGGGEGKAMY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL+Q+ E LA + + + R L+ +G + +++ ++
Sbjct: 163 IDTEGTFRPQRLSQIAERYGLAPEDVLNNVAYARAHNTEHQMRLLQEAAGMMADSRFSLV 222
Query: 156 VIDSIAGIFRNTY 168
V+DS ++R +
Sbjct: 223 VVDSATALYRTEF 235
>gi|403345476|gb|EJY72106.1| hypothetical protein OXYTRI_06896 [Oxytricha trifallax]
Length = 339
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 18/226 (7%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSILKGGIHAGGITE 65
G E +V+K+ + +K FQ + + +V +TGS D +L GGI G ITE
Sbjct: 65 GLSEAKVDKIVEAAQKIVNLGFQTASTYFEKRQSMVHLTTGSSSLDQLLGGGIETGSITE 124
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQ+C +C++ Q+ G +Y+ TE F RL + + L + +
Sbjct: 125 IFGEFRTGKTQICHTLCVTCQLPISKGGGEGMAMYVDTEGTFRPERLIPVAKRFGLDEQQ 184
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D + + D + L Q+ + EN+ ++VIDS ++R Y+ + R
Sbjct: 185 VLDNVAYARAHN-TDQQNKLLIQAAALMAENRFALLVIDSATALYRTDYSGRGELSARQM 243
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
+ L ++ + + V+ TNQV SAM +D P G
Sbjct: 244 HLAKFLRTLQRIADEFGVAVVITNQVVAQVDGSAMFAADSKKPIGG 289
>gi|375082756|ref|ZP_09729803.1| DNA repair and recombination protein RadB [Thermococcus litoralis
DSM 5473]
gi|374742604|gb|EHR78995.1| DNA repair and recombination protein RadB [Thermococcus litoralis
DSM 5473]
Length = 233
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 8/170 (4%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
+++TGS+ D +L GGI G +T++ GA GKT L +Q+ L L + V YI TE
Sbjct: 1 MLTTGSKSLDELLGGGIGRGVLTQIYGAFATGKTTLAMQVGL-LNDGK----VAYIDTEG 55
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
F RLA + E L K K K + ++F + K+T+ + K +IV+DSI
Sbjct: 56 GFSPERLATMAETRGLDKEKILQKFLVFEPFDFKEQKKTISGLKKIVNEKFSLIVVDSIT 115
Query: 162 GIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+R E+K A D+ L L+ K+ + VI NQV H+
Sbjct: 116 NHYR--IEENKSAVTA-DLGKQLQTLLWLARKYNLGVIVVNQVYFDSKHN 162
>gi|15669060|ref|NP_247864.1| DNA repair and recombination protein RadA [Methanocaldococcus
jannaschii DSM 2661]
gi|2500109|sp|Q49593.1|RADA_METJA RecName: Full=DNA repair and recombination protein RadA
gi|1378034|gb|AAC44122.1| RadA [Methanocaldococcus jannaschii]
gi|1591553|gb|AAB98875.1| DNA repair protein RAD51 (radA) [Methanocaldococcus jannaschii DSM
2661]
Length = 352
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------V 87
+STGS+ D IL GG+ + +TE +G G GKTQ+ Q C++LQ +
Sbjct: 111 LSTGSKNLDEILGGGLESQSVTEFAGMFGSGKTQIAHQACVNLQCPERIVADDAIKDEIL 170
Query: 88 SQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF 147
++P +YI TE F R+ Q+ E L + + IF+ Y E+
Sbjct: 171 NEPK--AVYIDTEGTFRPERIVQMAEALGLDGNEVLNNIFVARAYNSDMQMLYAENVENL 228
Query: 148 IEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I + ++++DS+ FR Y K +R + L++L+ + VVI TNQV
Sbjct: 229 IREGHNIKLVIVDSLTSTFRTEYIGRGKLAERQQKLGRHMATLNKLADIYNCVVIVTNQV 288
Query: 205 TS 206
+
Sbjct: 289 AA 290
>gi|170035198|ref|XP_001845458.1| DNA repair protein RAD51 [Culex quinquefasciatus]
gi|167877010|gb|EDS40393.1| DNA repair protein RAD51 [Culex quinquefasciatus]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITEL G GKTQLC + ++ Q+ G LY
Sbjct: 110 IQLTTGSKELDKLLGGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPVSQNGGEGKCLY 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + + L D + Y ++ +++ + E++ ++
Sbjct: 170 IDTEGTFRPERLLAVADRYKLVGSDVLDNVAYARAYNSDHQMQLLVQASAMMAESRYALL 229
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-----TSAMT 209
++DS +FR YA + R ++ L L+ + + VI TNQV SAM
Sbjct: 230 IVDSATALFRTDYAGRGELNARQVNLGKFLRMLLRLADEFGVAVIITNQVVAQVDASAMF 289
Query: 210 HSDKNIPALG 219
D P G
Sbjct: 290 TPDPKKPIGG 299
>gi|312383584|gb|EFR28621.1| hypothetical protein AND_03252 [Anopheles darlingi]
Length = 338
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 99 IQLTTGSKELDKLLGGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPVSQNGGEGKCLY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL E L D + Y ++ + + + +E++ +I
Sbjct: 159 IDTEGTFRPERLLATAERYKLVGTDVLDNVAYARAYNTDHQMQLLMLASAMMVESRYALI 218
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y + R M L L+ + + VI TNQV +AM
Sbjct: 219 IVDSATSLYRTDYCGRGELAARQGHMAKFLRMLLRLADEFGVAVIITNQVVAQVDGAAMF 278
Query: 210 HSDKNIPALG 219
+ D P G
Sbjct: 279 NPDPKKPVGG 288
>gi|134079842|emb|CAK40975.1| unnamed protein product [Aspergillus niger]
Length = 334
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V K+KD +K+ I E + +STGS++FDSIL GG
Sbjct: 51 LLKIKGFSEVKVEKIKD-AIQKSLPSASGFITAMELCHQRKRIVRISTGSKQFDSILGGG 109
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 110 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKELGGAGGKVAYIDTEGTFRPERIAQIAE 169
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 170 RFGVDADAAQENIAYARALNSEHQLELLNTLSKE--FAGGEYRLLIIDSIMNCFRVDYCG 227
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + I V+ TNQV S
Sbjct: 228 RGELADRQQKLNQFLMKLAHMAEEFNICVLMTNQVQS 264
>gi|449452620|ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
Length = 340
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS + D IL+GGI G ITE+ G GKTQLC +C++ Q+ G +Y
Sbjct: 101 IQLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 161 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 221 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 277
>gi|311698176|gb|ADQ00382.1| Dmc1 [Pneumocystis jirovecii]
Length = 337
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
GF + +V+K+K++ +K FQ V +STGS++FD++L GGI + ITE
Sbjct: 63 GFSDAKVDKLKEIIQKLCPPPFQTAMEVSSFRRRVNYISTGSKQFDAMLGGGIQSMSITE 122
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G CGKTQ+ MC++ Q+ + G Y+ TE F R+ + + +
Sbjct: 123 VFGEFRCGKTQISHTMCVTCQLPREMGGAEGKAAYLDTEGTFRPDRIKSIAARFGVDAEQ 182
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
+ I + + + I+ T+ S+ G + ++++DSI +FR Y+ +
Sbjct: 183 AMNNILVGRAFNSEHQMDLINKMCTIFSEDG----RYRLLIVDSIMALFRVDYSGRGELS 238
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L+ ++ ++ I V TNQV +
Sbjct: 239 ERQQKLNVMLSRLNRIAEEYNIAVFLTNQVQA 270
>gi|241007827|ref|XP_002405184.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
gi|215491711|gb|EEC01352.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
Length = 352
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D +L GGI G ITE+ G GKTQLC M ++ Q+ H G LY
Sbjct: 113 VQITTGSTELDKLLGGGIETGSITEVFGEFRTGKTQLCHMMAVTCQLPIEHSGGEGKCLY 172
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL E L+ P D + Y + L S + E + ++
Sbjct: 173 IDTEGTFRPERLLAAAEKYGLSGPDVLDNVAYARAYNSDHQTQLLIQASAMMAETRYALL 232
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R Y+ + R + L L+ + + V+ TNQV +
Sbjct: 233 VVDSAMALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVLITNQVVA 284
>gi|367015798|ref|XP_003682398.1| hypothetical protein TDEL_0F03760 [Torulaspora delbrueckii]
gi|359750060|emb|CCE93187.1| hypothetical protein TDEL_0F03760 [Torulaspora delbrueckii]
Length = 334
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 102/220 (46%), Gaps = 37/220 (16%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K +VG P +D+ + V +STGS++ DS+L GGI IT
Sbjct: 59 GLSEVKVEKIKE-AAGKIIKVGFIPATIQLDIRQKVFALSTGSKQLDSVLGGGIMTMSIT 117
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE---LSPL 117
E+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+ E L P
Sbjct: 118 EVFGEFRCGKTQMAHTLCITAQLPREMGGGEGKVAYIDTEGTFRPERIKQIAERYGLDPE 177
Query: 118 AKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKVG---------MIVIDSIAGIFRNT 167
A C E I R L S+ + ++G +IV+DSI FR
Sbjct: 178 A------------CLENISYARALNSEHQMELAEQLGEELSSGDYRLIVVDSIMANFRVD 225
Query: 168 Y-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
Y + +R + L+ L+ + I + TNQV S
Sbjct: 226 YCGRGELNERQQKLNQHLFKLNRLAEEFNIAIFMTNQVQS 265
>gi|307596612|ref|YP_003902929.1| DNA repair and recombination protein RadA [Vulcanisaeta distributa
DSM 14429]
gi|307551813|gb|ADN51878.1| DNA repair and recombination protein RadA [Vulcanisaeta distributa
DSM 14429]
Length = 388
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG + D +L GGI ITEL G G GKTQLC Q+ + +Q+ + G+ LY+
Sbjct: 157 ISTGVKSLDELLGGGIETKAITELVGEFGSGKTQLCHQLSVMVQLPEDKGGLKAKALYVD 216
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVI 157
TE+ F R+ Q+ + L + I Y +E IE + +G+IVI
Sbjct: 217 TENTFRPERIMQMAKYRGLDPQEALKNILYARAYNSDHQMMIIEESKKIIEKENIGLIVI 276
Query: 158 DSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHEL 190
DS+ FR+ Y + + A + L H++ +L
Sbjct: 277 DSLVAHFRSEYPGRENL--AERQQKLNHHIAQL 307
>gi|340503751|gb|EGR30280.1| meiotic recombination protein dmc1, putative [Ichthyophthirius
multifiliis]
Length = 318
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYIC 98
+STGS+ + IL GGI + ITE G GKTQ+ +C+ Q+ SQP K +LYI
Sbjct: 82 ISTGSKSLNEILNGGIESQSITEFYGEYRTGKTQIVHTLCVLAQLENHCSQPGK-ILYID 140
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI---ENKVGMI 155
TE F R+ Q+ + + + I Y +D + L ++S I EN +I
Sbjct: 141 TEGTFRPERVCQIASFYGIEGEEALNNIVYGRAYT-VDQQMILLTKSAAIMVEENNFALI 199
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI FR ++ + +R + L ++ + + V+ TNQV +
Sbjct: 200 IVDSIMANFRCDFSGRGELSERQQSLGKFLSRLQRVAAEFNVAVVITNQVMA 251
>gi|225444585|ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
gi|297738498|emb|CBI27743.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 6/177 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +++GS + D IL+GG+ G ITE+ G GKTQLC +C++ Q+ G +Y
Sbjct: 98 IQITSGSRELDKILEGGLETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S +E + ++
Sbjct: 158 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALM 217
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 218 IVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 274
>gi|325968380|ref|YP_004244572.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
gi|323707583|gb|ADY01070.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
Length = 358
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG + D +L GGI ITEL G G GKTQLC Q+ + +Q+ + G+ LY+
Sbjct: 127 ISTGVKALDELLGGGIETKAITELVGEFGSGKTQLCHQLSIIVQLPEDRGGLKAKALYVD 186
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVI 157
TE+ F R+ Q+ + L + I Y +E IE + +G+IVI
Sbjct: 187 TENTFRPERIMQIAKYRGLDPQEALRNILYARAYNSDHQMMIIEESKKIIEKENIGLIVI 246
Query: 158 DSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHEL 190
DS+ FR+ Y + + A + L H++ +L
Sbjct: 247 DSLVAHFRSEYPGRENL--AERQQKLNHHIAQL 277
>gi|363741358|ref|XP_415870.3| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog 3
[Gallus gallus]
Length = 366
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 30/226 (13%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV-- 94
+ T+ + T D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 85 EQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAG 144
Query: 95 --LYICTESVFPTARLAQL-------CE--------------LSPLAKPKCSDKIFITHC 131
++I TE F R A + C+ L + I+ C
Sbjct: 145 EAVFIDTEGSFMVDRAADIATACVRHCQLIAEAHQEEDHLQALETFSLESILSHIYYFRC 204
Query: 132 YEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHE 189
++I+L + F+ +KV ++VID IA FR+ + ED + R + LA L
Sbjct: 205 RDYIELLAQVYLLPDFLSEHSKVRLVVIDGIAFPFRHDF-EDLSL-RTRLLNGLAQQLII 262
Query: 190 LSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
++ H+ V+ TNQ+T+ + +PALG ++ A +R + H+
Sbjct: 263 IANDHKSAVVLTNQMTTRFGQNQSMLVPALGESWGHAATVRLIFHW 308
>gi|281204720|gb|EFA78915.1| putative DNA repair protein [Polysphondylium pallidum PN500]
Length = 350
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ + TGS++ DS+L+GG G ITE+ G GKTQ+C +C++ Q++ G LY
Sbjct: 111 VQIRTGSKELDSLLEGGFETGSITEIFGEFRTGKTQICHTLCVTCQLTLAQGGGEGRALY 170
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + Y + L S + E++ ++
Sbjct: 171 IDTEGTFRPERLLAIAERYNLNGEHVLDNVAYARAYNSDHQMQLLVQASAMMSESRYILL 230
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----AMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV + AM
Sbjct: 231 IVDSATSLYRTDYSGRGELSDRQRHLARFLRALQRLADEFGVAVVITNQVVAQVDGGAMF 290
Query: 210 HSDKNIPALG 219
+ + N P G
Sbjct: 291 NPNPNKPIGG 300
>gi|255718911|ref|XP_002555736.1| KLTH0G16148p [Lachancea thermotolerans]
gi|238937120|emb|CAR25299.1| KLTH0G16148p [Lachancea thermotolerans CBS 6340]
Length = 478
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 34/251 (13%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ ++G D +L GG+ GITE+ G+S GK+Q +Q+ L +Q+ + G+ +Y
Sbjct: 85 LAFTSGDRDVDDLLGGGLRTHGITEIFGSSSTGKSQFLMQLSLCVQLPKSLGGLDGKCVY 144
Query: 97 ICTESVFPTARLAQLCELSPLA---KPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-- 151
I TE PT RL ++ + D IF +C + + + L Q + +
Sbjct: 145 ITTEGDLPTRRLDEMIRSKSQKDGFQSLSQDNIFTVNCNDLANQEHILNVQLPILMERNH 204
Query: 152 -VGMIVIDSIAGIFRNTYAEDKYVQRAHDMR----DLAHYLHELSIKHRIVVICTNQVTS 206
+ +I++DS++ R E + + + D R +A L SIKH + V+ NQV
Sbjct: 205 DIRLIIVDSVSHHVR-VELERRSFKDSQDNRHYVDKMAQNLLNFSIKHSVAVVVANQV-- 261
Query: 207 AMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIV-----VICTNQVTSAMTHSDK 261
DK +P L R A+Y +++ W V I Q+ +T S K
Sbjct: 262 ----GDKPLPEAKLADSSVE--RGPANYDYQLG---WTVGWKDSSILYRQLNDGLTLSGK 312
Query: 262 NIPALGLSWSN 272
+ G WS+
Sbjct: 313 D---RGRLWSD 320
>gi|358374534|dbj|GAA91125.1| meiotic recombination protein Dmc1 [Aspergillus kawachii IFO 4308]
Length = 337
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V K+KD +K+ I E + +STGS++FDSIL GG
Sbjct: 54 LLKIKGFSEVKVEKIKD-AIQKSLPSASGFITAMELCHQRKRIVRISTGSKQFDSILGGG 112
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 113 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKELGGADGKVAYIDTEGTFRPERIAQIAE 172
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 173 RFGVDPDAAQENIAYARALNSEHQLELLNTLSKE--FAGGEYRLLIIDSIMNCFRVDYCG 230
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + I V+ TNQV S
Sbjct: 231 RGELADRQQKLNQFLMKLAHMAEEFNICVLMTNQVQS 267
>gi|338710970|ref|XP_001500693.3| PREDICTED: DNA repair protein RAD51 homolog 3 [Equus caballus]
Length = 337
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQNFIITFCSALDNILGGGVPLTKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTAR---LAQLC------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R +A C L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDIANACIQHLQLIAGTHLGEEYSKALEDFTLENILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 308
>gi|401424806|ref|XP_003876888.1| putative RAD51 protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493132|emb|CBZ28417.1| putative RAD51 protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 375
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 135 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMALY 194
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P LA C+ H + + +++ + EN
Sbjct: 195 IDTEGTFRPERLVAVAERYKLDPEDVLANVACARAFNTDHQQQLL-----MQASAMMAEN 249
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELS 191
+ +I++DS ++R Y+ ++ R + LH L+
Sbjct: 250 RFALIIVDSATALYRTDYSGRNELAARQMHLGKFLRSLHNLA 291
>gi|297298124|ref|XP_001108071.2| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Macaca
mulatta]
Length = 523
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+++ + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 208 VSRACAPKMQTAYEIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 267
Query: 76 QLCLQMCLSLQVSQPHKG-----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH 130
Q C+ M + L H G V+YI TES F RL ++ E +K+ +T
Sbjct: 268 QFCIMMSI-LATLPTHMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTS 326
Query: 131 ----------CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRA 177
C E + +LE + I + +++IDS+A + R +T + +R
Sbjct: 327 SKVHLYRELTCDEVLQRIESLEEE--IISKGIKLVIIDSVASVVRKEFDTQLQGNLKERN 384
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+ A L L+ + I VI TNQ+T+ ++
Sbjct: 385 KFLAREACSLKYLAEEFSIPVILTNQITTHLS 416
>gi|317033565|ref|XP_001395134.2| meiotic recombination protein DMC1 [Aspergillus niger CBS 513.88]
Length = 337
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V K+KD +K+ I E + +STGS++FDSIL GG
Sbjct: 54 LLKIKGFSEVKVEKIKD-AIQKSLPSASGFITAMELCHQRKRIVRISTGSKQFDSILGGG 112
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 113 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKELGGAGGKVAYIDTEGTFRPERIAQIAE 172
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 173 RFGVDADAAQENIAYARALNSEHQLELLNTLSKE--FAGGEYRLLIIDSIMNCFRVDYCG 230
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + I V+ TNQV S
Sbjct: 231 RGELADRQQKLNQFLMKLAHMAEEFNICVLMTNQVQS 267
>gi|70982368|ref|XP_746712.1| meiotic recombination protein (Dmc1) [Aspergillus fumigatus Af293]
gi|66844336|gb|EAL84674.1| meiotic recombination protein (Dmc1), putative [Aspergillus
fumigatus Af293]
gi|159123045|gb|EDP48165.1| meiotic recombination protein (Dmc1), putative [Aspergillus
fumigatus A1163]
Length = 338
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E++V K+K+ +K I E + +STGS++FDSIL GG
Sbjct: 55 LLKIKGFSEFKVEKIKE-AIQKCLPAASGFITAMELSHQRKRVVKISTGSKQFDSILGGG 113
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 114 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAE 173
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 174 RFSVDPDSAQENIAYARALNSEHQLELLNTLSRE--FAGGEYRLLIIDSIMNCFRVDYCG 231
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 232 RGELADRQQKLNQFLMRLAHMAEEFNVCVLMTNQVQS 268
>gi|50311197|ref|XP_455622.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644758|emb|CAG98330.1| KLLA0F11957p [Kluyveromyces lactis]
Length = 329
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 31/217 (14%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP------IDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K +G P I + +STGS++FDS+L GGI IT
Sbjct: 54 GLSEVKVEKIKE-AANKIITIGFIPATLQWQIRQAVMSISTGSKQFDSVLGGGIMTMSIT 112
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQ----PHKGVLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQL +C++ Q+ + P V YI TE F R+ Q+ + L P
Sbjct: 113 EVFGEFRCGKTQLSHTLCVTAQLPKELNGPEGKVAYIDTEGTFRPERIKQIAQGYDL-DP 171
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFI----------ENKVGMIVIDSIAGIFRNTYA- 169
+ C E I R L S+ + ++++DSI FR Y+
Sbjct: 172 EV--------CLENISYARALNSEHQMELLEQLGEELSSGEYRLLIVDSIMANFRVDYSG 223
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L+ ++ ++ I V TNQV S
Sbjct: 224 RGELNERQQKLNQHLSRLNRIAEENNIAVFMTNQVQS 260
>gi|50293765|ref|XP_449294.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528607|emb|CAG62268.1| unnamed protein product [Candida glabrata]
Length = 334
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTE--IVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K +VG P +D+ + I +STGS++ DS+L GGI IT
Sbjct: 59 GLSEVKVEKIKE-AANKLVKVGFVPATVQMDLRQKVISISTGSKQLDSVLGGGIMTMSIT 117
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQ+ +C++ Q+ + G V +I TE F R+ Q+ E L
Sbjct: 118 EVFGEFRCGKTQMSHTLCVTAQLPKSMGGGEGKVAFIDTEGTFRPERIKQIAERYDLDPD 177
Query: 121 KCSDKIFIT------HCYEFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDK 172
C + I H E ++ L L S S +I++DSI FR Y +
Sbjct: 178 SCLENITYARALNSEHQMELVEQLGEELSSGS------YTLIIVDSIMANFRVDYCGRGE 231
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L+ L+ + + V TNQV S
Sbjct: 232 LNERQQKLNQHLFKLNRLAEEFNLAVFMTNQVQS 265
>gi|37778910|gb|AAO72729.1| Rad51 [Trypanosoma cruzi]
Length = 371
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I+V+TGS + D +L GGI GGI EL G GKTQLC +C++ Q+ G LY
Sbjct: 131 IMVTTGSREVDKLLGGGIETGGIRELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMPLY 190
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P L+ C+ H + + L++ + EN
Sbjct: 191 IDTEGTFRPERLVAVAERYKLDPQDVLSNVACARAFNTDHQQQLL-----LQASAMMAEN 245
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELS 191
+ +I++DS ++R Y+ ++ R + LH L+
Sbjct: 246 RFAIIIVDSATALYRTDYSGRNELAARQMHLGKFLRSLHNLA 287
>gi|322780402|gb|EFZ09890.1| hypothetical protein SINV_00924 [Solenopsis invicta]
Length = 310
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ ++TGS++ D +L GGI G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 70 VYITTGSKELDKLLGGGIETGSITELFGEFRSGKSQLCHTLAVNCQLPISMGGAEGKCLY 129
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RL + E + P D + Y + L S + E + ++
Sbjct: 130 IDTENTFRPERLIAVAEKYKINGPSVLDNVACARAYNTDHQTQLLMLASAMMTEARYALL 189
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
V+DS G++R Y+ + R + + L L+ ++ I V+ TNQV ++M
Sbjct: 190 VVDSATGLYRTDYSGRGELGARQNHLGRFLRMLLRLADEYGIAVVITNQVVAQVDGAASM 249
Query: 209 THSDKNIPALG 219
D+ P G
Sbjct: 250 FGGDQKKPIGG 260
>gi|452822335|gb|EME29355.1| DNA-repair protein XRCC3 [Galdieria sulphuraria]
Length = 334
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 22/216 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGG--ITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+S G K D L GG+ AG I E G +G GKTQL LQ+ + Q+ G V+Y
Sbjct: 81 LSLGCPKLDDFLHGGLIAGQGQIFEFCGEAGVGKTQLMLQLSIVSQLKTRDGGLDSRVIY 140
Query: 97 ICTESVFPTARLAQL----CELSP-LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK 151
ICT FP++RL QL + P L + I + L+ ++S+ ++ N
Sbjct: 141 ICTSGRFPSSRLQQLIAAFVQRYPYLEANSVASNIIVETVKSLEQLEVLVDSRLVYLLNN 200
Query: 152 VG--MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT---- 205
+I+IDS+A +FR T D R+ + L L +S KH +++ TN++T
Sbjct: 201 TDAKVIIIDSLARLFRET-GLDALQHRSLVLHRLGIQLKRISYKHETLLLVTNEMTGQPA 259
Query: 206 -SAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISI 240
S H+ P LG ++ + R YL ++++
Sbjct: 260 GSFNPHNFVQTPCLGKAWKHNVNHR---FYLRKVTL 292
>gi|380796657|gb|AFE70204.1| DNA repair protein RAD51 homolog 3 isoform 1, partial [Macaca
mulatta]
Length = 374
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 94 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 153
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 154 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 213
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 214 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 271
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 272 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 315
>gi|425773056|gb|EKV11430.1| Meiotic recombination protein (Dmc1), putative [Penicillium
digitatum Pd1]
gi|425778833|gb|EKV16938.1| Meiotic recombination protein (Dmc1), putative [Penicillium
digitatum PHI26]
Length = 338
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V KVK+ +K I E + +STGS++FDSIL GG
Sbjct: 55 LLKIKGFSEVKVEKVKE-AIQKCLPAASGFISAMELHHQRKKVVRISTGSKQFDSILNGG 113
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 114 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPRESGGAAGRVAYIDTEGTFRPERIAQIAE 173
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL SQ+ F + ++VIDSI FR Y
Sbjct: 174 RFGIDPDTAQENISYARALNSEHQLELLNTL-SQA-FAGGEYRLLVIDSIMNCFRVDYCG 231
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 232 RGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 268
>gi|332374336|gb|AEE62309.1| unknown [Dendroctonus ponderosae]
Length = 338
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
EV+K+ + A + + DM I VSTGS++ D +L GGI G ITEL G GKT
Sbjct: 76 EVSKLVPMGFTTATEFHQKRADM--ICVSTGSKELDRLLGGGIETGSITELFGEFRTGKT 133
Query: 76 QLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHC 131
Q+C + ++ Q+ G LYI TE F RL + E + D +
Sbjct: 134 QICHTLAVTCQLPTDCGGAEGKCLYIDTEGTFRPERLLAVAERFKMEPQTVLDNVAYARA 193
Query: 132 YEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHE 189
Y + L S + E++ ++V+DS ++R+ Y+ + R + L
Sbjct: 194 YNTDHQTQLLLHASAMMAESRYALLVVDSAMALYRSEYSGRGELAARQMHLSRFLRMLLR 253
Query: 190 LSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
L+ + + V+ TNQV +AM ++D P G
Sbjct: 254 LADEFGVAVVITNQVVAQVDGAAMFNADPKKPIGG 288
>gi|342185933|emb|CCC95418.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 371
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 16/165 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 131 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISQGGAEGMALY 190
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P L C+ + H + + L++ + EN
Sbjct: 191 IDTEGTFRPERLVAVAERYRLDPQDVLTNVACARALNTDHQQQLL-----LQASAMMAEN 245
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKH 194
+ +I++DS ++R Y+ + R + LH L+ +H
Sbjct: 246 RFAIIIVDSATALYRTDYSGRGELAARQVHLGKFLRTLHNLAGEH 290
>gi|355568579|gb|EHH24860.1| hypothetical protein EGK_08587 [Macaca mulatta]
Length = 367
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|6714639|dbj|BAA89533.1| LIM15/DMC1 homolog [Coprinopsis cinerea]
Length = 345
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTE--IVVSTGSEKFDSIL 54
M Q+LK+ G E +V K+K+ +K +F G D + +V+STGS+ D IL
Sbjct: 60 MTTRRQLLKIKGMSEAKVEKIKEAAQKIHGSSFATGVEIQDKRKRVLVISTGSKLVDGIL 119
Query: 55 KGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQ 110
GG+ + ITE+ G GKTQL M + Q+ + G V YI TE F R+
Sbjct: 120 GGGVMSQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAGKVAYIDTEGTFRPDRIRA 179
Query: 111 LCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENK-VGMIVIDSIAGI 163
+ + + + I + E I+ E + F E+K +++IDSI +
Sbjct: 180 IADRFGVDGTMALENILYARAFNSEHQMELIN-----ECSARFAEDKDFRLLIIDSIMAL 234
Query: 164 FRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y+ + +R + + L +LS + I V+ TNQV S
Sbjct: 235 FRVDYSGRGELSERQQKLAQMLSKLTKLSEEFNIAVLMTNQVQS 278
>gi|355754048|gb|EHH58013.1| hypothetical protein EGM_07774, partial [Macaca fascicularis]
Length = 374
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 94 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 153
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 154 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 213
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 214 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 271
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 272 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 315
>gi|62738997|pdb|2BKE|A Chain A, Conformational Flexibility Revealed By The Crystal
Structure Of A Crenarchaeal Rada
Length = 324
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A +V K ++ +I STGS+ D +L GGI TE G G GKT
Sbjct: 64 EARDALDIRFKTALEVKKERXNVKKI--STGSQALDGLLAGGIETRTXTEFFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKGVL-----YICTESVFPTARLAQLCELSPLAKPKCSDKIF--- 127
QLC Q+ +++Q+ P KG L YI TE F R+ + L + I+
Sbjct: 122 QLCHQLSVNVQLP-PEKGGLSGKAVYIDTEGTFRWERIENXAKALGLDIDNVXNNIYYIR 180
Query: 128 ---ITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDL 183
H +D + L S+ I+ +IV+DS+ FR Y + R +
Sbjct: 181 AINTDHQIAIVDDLQELVSKDPSIK----LIVVDSVTSHFRAEYPGRENLAVRQQKLNKH 236
Query: 184 AHYLHELSIKHRIVVICTNQVTS 206
H L L+ + I VI TNQV +
Sbjct: 237 LHQLTRLAEVYDIAVIITNQVXA 259
>gi|255954943|ref|XP_002568224.1| Pc21g11930 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589935|emb|CAP96090.1| Pc21g11930 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 351
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V KVK+ +K I E + +STGS++FD+IL GG
Sbjct: 68 LLKIKGFSEVKVEKVKE-AIQKCLPTASGFITAMELHHQRKKVVRISTGSKQFDAILNGG 126
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 127 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKELGGAAGRVAYIDTEGTFRPERIAQIAE 186
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
L + I ++L TL SQ+ F+ + ++VIDSI FR Y
Sbjct: 187 RFGLDPDTAQENISYARALNSEHQLELLNTL-SQA-FVGGEYRLLVIDSIMNCFRVDYCG 244
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 245 RGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 281
>gi|145353002|ref|XP_001420821.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581056|gb|ABO99114.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 358
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
V T E D L GG +G ITEL G G GKTQ+ +Q+ +S Q + G+ +Y+
Sbjct: 96 VFTFCEALDDALGGGAASGEITELCGCPGIGKTQMAMQLSVSAQTPRAFGGLGGEAVYVD 155
Query: 99 TESVFPTARLAQLCE-----LSPLAKPKCSDK---------------------IFITHCY 132
TE F R + E L AK +C D+ I + C+
Sbjct: 156 TEGSFTAERAMDMAEALAEHLGRCAK-RCEDEDARREMEAALETCAPEAMLRGIHLFRCH 214
Query: 133 EFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHEL 190
E +L LE+ FI KV ++VIDS+A FR + + R + + + L +
Sbjct: 215 EVTELLAALETLGEFIAERPKVRLVVIDSVAFHFRQDFQD--MALRTTILSKMTNRLMSI 272
Query: 191 SIKHRIVVICTNQVT--SAMTHSDKNIPALGLTYERAHDMR 229
+ ++ V+ NQVT S + +PALG +Y A R
Sbjct: 273 ATTQQVAVVTVNQVTVKPQRDGSARLVPALGESYAHACTTR 313
>gi|397493033|ref|XP_003817418.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Pan paniscus]
Length = 337
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIEHLQLIAEKHKGEEHQKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 308
>gi|305663856|ref|YP_003860144.1| DNA repair and recombination protein RadA [Ignisphaera aggregans
DSM 17230]
gi|304378425|gb|ADM28264.1| DNA repair and recombination protein RadA [Ignisphaera aggregans
DSM 17230]
Length = 316
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 10/188 (5%)
Query: 26 KKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
K A ++ K + + +I +TGS+ D++L GGI ITEL G G GKTQ+C Q+ +++
Sbjct: 68 KTALEIKKERMSLPKI--TTGSKNLDTLLGGGIEVKTITELFGEFGSGKTQICHQLAVNV 125
Query: 86 QVSQPHKG-----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRT 140
Q+ P KG +YI TE F R+ + + + + I
Sbjct: 126 QLP-PEKGGLSKRAIYIDTEGTFRWERIEAMARAIGMNPDEAMENILYVRAVNSDHQMAI 184
Query: 141 LESQSGFI-ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
E I + +G++V+DSI G FR Y + R + H L ++ + V
Sbjct: 185 AEELKEIIPKENIGLVVVDSITGHFRAEYPGRENLAVRQQKLNRHLHQLMSIAELFDVAV 244
Query: 199 ICTNQVTS 206
+ TNQV +
Sbjct: 245 VVTNQVMA 252
>gi|326931485|ref|XP_003211859.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Meleagris
gallopavo]
Length = 355
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV ++I TE F
Sbjct: 85 LDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMV 144
Query: 106 ARLA-------QLCE--------------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQ 144
R A Q C+ L + I+ C ++I+L +
Sbjct: 145 DRAADIATACVQHCQLIAEAHQEEDHLKALETFSLESILSHIYYFRCRDYIELLAQVYLL 204
Query: 145 SGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
F+ +KV ++VID IA FR+ + ED + R + LA L ++ H+ V+ TN
Sbjct: 205 PDFLSEHSKVRLVVIDGIAFPFRHDF-EDLSL-RTRLLNGLAQQLIIIANDHKSAVVLTN 262
Query: 203 QVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
Q+T+ + +PALG ++ A +R + H+
Sbjct: 263 QMTTRFGQNQSMLVPALGESWGHAATVRLIFHW 295
>gi|157965115|gb|ABW06618.1| DNA repair protein RAD51 [Buddenbrockia plumatellae]
Length = 254
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITEL G GK+QLC Q+C++ Q+ G LY
Sbjct: 26 IQISTGSKELDKLLQGGIETGSITELFGEFRTGKSQLCHQLCITCQLPVDCGGAEGKALY 85
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L + D + Y D + L Q+ + E++ +
Sbjct: 86 IDTEGTFRPERLLAAAQRYGLNGQQALDNVACARAYN-TDHQTQLLCQAAAMMAESRYAL 144
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-----TSAM 208
+V+DS ++R Y + R + L ++ + + V+ TNQV +++
Sbjct: 145 LVVDSATALYRTDYGGRSELAPRQMHLAKFLRLLLRIADEFGVAVVITNQVVAQVDNASL 204
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 205 FQADSKKPVGG 215
>gi|194382504|dbj|BAG64422.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 308
>gi|149246169|ref|XP_001527554.1| DNA repair protein RAD51 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447508|gb|EDK41896.1| DNA repair protein RAD51 [Lodderomyces elongisporus NRRL YB-4239]
Length = 362
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 22/196 (11%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 119 ICLTTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLSVTCQLPIDMGGGEGKCLY 178
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIEN 150
I TE F RL + E L C D + Y ++L + ++S F
Sbjct: 179 IDTEGTFRPNRLVSIAERYGLNANDCLDNVAYARAYNAEHQLNLLNLAAEMMAESRF--- 235
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT---- 205
++++DSI ++R YA + R + L L+ + I V+ TNQV
Sbjct: 236 --SLLIVDSIMSLYRTDYAGRGELSARQTSVAKFMRTLQRLADEFGIAVVITNQVVAQVD 293
Query: 206 --SAMTHSDKNIPALG 219
S M + D P G
Sbjct: 294 GMSGMYNPDPKKPIGG 309
>gi|402584607|gb|EJW78548.1| hypothetical protein WUBG_10544 [Wuchereria bancrofti]
Length = 224
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 15/170 (8%)
Query: 36 IDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL 95
++ T+ ++ TG + D++L GGI G E+ G S GK+Q C+Q+ ++LQ ++ K +
Sbjct: 12 LEETDELLETGLQSLDALLGGGISPGTFLEIVGLSATGKSQFCMQLAVNLQKNKTKKDSV 71
Query: 96 YICTESVFPTARLAQLC-----ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
Y+ TE F T R+ + + PL K I ++ C + ++L + ++
Sbjct: 72 YVDTEGGFHTKRICDIATNVLKAMEPLESLK---YIQVSRCRDLVELTSAIHRLELLVQQ 128
Query: 151 --KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
K+G++++DS+A R E+ Y R+ +++ L +L+ +R++V
Sbjct: 129 DPKIGLVIVDSVAMPLR---GENDYALRSR--LEISRILSKLAASYRLIV 173
>gi|321265185|ref|XP_003197309.1| meiotic recombination-related protein [Cryptococcus gattii WM276]
gi|317463788|gb|ADV25522.1| Meiotic recombination-related protein, putative [Cryptococcus
gattii WM276]
Length = 308
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVV--STGSEKFDSILKGGIHAGGITELSG 68
G E +V K+K+ AF G D VV +TGS+ D++L GGI ITE+ G
Sbjct: 38 GLSEAKVEKLKE--TSPAFLTGTEIADRRANVVYITTGSKSVDAMLGGGIATQSITEVFG 95
Query: 69 ASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSD 124
GKTQLC +C+S Q+ + G V YI TE F R+ + + + D
Sbjct: 96 EYRTGKTQLCHTLCVSTQLPEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFGVDSNMALD 155
Query: 125 KIFIT-------HCYEFIDLKRTLESQSGFIENKV-GMIVIDSIAGIFRNTYA-EDKYVQ 175
+ C +DL F+E + ++++DSI +FR Y+ + +
Sbjct: 156 NVLCARAWSSEHQCDLLVDLAIR------FVEERAYKLLIVDSIMNLFRQDYSGRGELSE 209
Query: 176 RAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
R + L +L+ + I V+ TNQV +
Sbjct: 210 RQQKLNQFLARLQKLAEEFNIAVVLTNQVQA 240
>gi|297700682|ref|XP_002827366.1| PREDICTED: DNA repair protein RAD51 homolog 3 isoform 1 [Pongo
abelii]
Length = 443
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 163 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 222
Query: 95 LYICTESVFPTAR---LAQLC--ELSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R LA C L +A+ ++ I+ C +
Sbjct: 223 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 282
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 283 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 340
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 341 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 384
>gi|238497916|ref|XP_002380193.1| DNA repair protein (Rad57), putative [Aspergillus flavus NRRL3357]
gi|220693467|gb|EED49812.1| DNA repair protein (Rad57), putative [Aspergillus flavus NRRL3357]
Length = 585
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GGI G +TE++G SG GKTQ L + L++Q+ P K +YI
Sbjct: 125 AISTLDTALDELLGGGIPTGYVTEVTGESGSGKTQFLLSLLLAVQLPSPKGLGKNAVYIS 184
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK------- 151
TE+ T RL+QL + +P D+ I+ LESQ + +
Sbjct: 185 TEAPLSTPRLSQLIDSNPYLSTLPRDRAPTLENILSIN-AMDLESQDHILNYQLPVAIQR 243
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + + R+ ++ L L L+++ I ++ NQV+
Sbjct: 244 YNVGLVVIDSITSNYRAEHTSHNILGLSTRSGELTKLGQMLRNLAVQEDIAIVVANQVS 302
>gi|405123640|gb|AFR98404.1| MmLim15 protein [Cryptococcus neoformans var. grubii H99]
Length = 330
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSILKGGIHA 60
+LK+ G E +V K+K+ K AF G D VV +TGS+ D++L GGI
Sbjct: 50 LLKIKGLSEAKVEKLKETCTKILPPAFLTGTEIADRRANVVYITTGSKSVDAMLGGGIAT 109
Query: 61 GGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSP 116
ITE+ G GKTQLC +C+S Q+ + G V YI TE F R+ + +
Sbjct: 110 QSITEVFGEYRTGKTQLCHTLCVSTQLPEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFG 169
Query: 117 LAKPKCSDKIFIT-------HCYEFIDLKRTLESQSGFIENKV-GMIVIDSIAGIFRNTY 168
+ D + C +DL F+E + ++++DSI +FR Y
Sbjct: 170 VDSNMALDNVLCARAWSSEHQCDLLVDLAIR------FVEERAYKLLIVDSIMNLFRQDY 223
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + L +L+ + I V+ TNQV +
Sbjct: 224 SGRGELSERQQKLNQFLARLQKLAEEFNIAVVLTNQVQA 262
>gi|448592978|ref|ZP_21652025.1| DNA repair and recombination protein RadB [Haloferax elongans ATCC
BAA-1513]
gi|445731004|gb|ELZ82591.1| DNA repair and recombination protein RadB [Haloferax elongans ATCC
BAA-1513]
Length = 257
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+ P +TE VSTG + D +L GG G +T++ G GKT + L +++V+
Sbjct: 24 RTPSVVTE-PVSTGCKPLDDLLDGGFERGTVTQVYGPPAAGKTNVAL--SAAVRVAAEGG 80
Query: 93 GVLYICTESVFPTARLAQLCE-LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK 151
V+YI TE + R QL E ++P + ++ I+ Y+F D ++ + S F E +
Sbjct: 81 TVVYIDTEGL-SVDRFQQLAEAVAPGDVEAVTSRLMISEAYDFEDQEQAVRDASEFAE-Q 138
Query: 152 VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYL-HELSI--KHRIVVICTNQVTSAM 208
+IV+DS G +R A + +R +A + H LSI KH I V+ TNQV S
Sbjct: 139 ADLIVVDSATGFYRLERAGEG--DGGETLRRVARQVTHLLSIARKHDIAVVLTNQVYSD- 195
Query: 209 THSDKNIPALGLTYE 223
SD+ G T E
Sbjct: 196 PESDRTRALGGHTLE 210
>gi|332848643|ref|XP_511913.3| PREDICTED: DNA repair protein RAD51 homolog 3 [Pan troglodytes]
Length = 337
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIEHLQLIAEKHKGEEHQKALEDFTLDNILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 308
>gi|26345474|dbj|BAC36388.1| unnamed protein product [Mus musculus]
Length = 384
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 105 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 164
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 165 VFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENILSHIYYFRCHD 224
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + KV +++ID IA FR+ ED + R + LA + L+
Sbjct: 225 YTELLAQVYLLPDFLSDHPKVKLVIIDGIAFPFRHDL-EDLSL-RTRLLNGLAQQMISLA 282
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 283 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 326
>gi|148683866|gb|EDL15813.1| Rad51 homolog c (S. cerevisiae), isoform CRA_a [Mus musculus]
Length = 386
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 107 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 166
Query: 95 LYICTESVFPTAR---LAQLC------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R LA C L I+ C++
Sbjct: 167 VFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENILSHIYYFRCHD 226
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + KV +++ID IA FR+ ED + R + LA + L+
Sbjct: 227 YTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDL-EDLSL-RTRLLNGLAQQMISLA 284
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 285 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 328
>gi|300708476|ref|XP_002996416.1| hypothetical protein NCER_100491 [Nosema ceranae BRL01]
gi|239605717|gb|EEQ82745.1| hypothetical protein NCER_100491 [Nosema ceranae BRL01]
Length = 336
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 11/178 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS FDS+L GGI ITE+ G GKTQL MC+++Q+S+ G +I
Sbjct: 97 ISTGSTDFDSLLGGGIQTMSITEMFGEFRTGKTQLATTMCITVQLSEEEGGAKGKAAFID 156
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQS-GFIEN-KVGMIV 156
TE F RL ++ + + D I Y ++ + F E+ K ++V
Sbjct: 157 TEGTFRPERLREIANRFNIDPDEALDNIIYARAYNSEHQNELVQQLAVKFAEDSKYKLLV 216
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV----TSAMT 209
IDSI +FR ++ + +R + L +S + I V+ TNQ+ + AMT
Sbjct: 217 IDSIISLFRVDFSGRGELGERQQKLNQFLSKLINISEEFNIAVLITNQMMADPSGAMT 274
>gi|325969248|ref|YP_004245440.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
gi|323708451|gb|ADY01938.1| DNA repair and recombination protein RadA [Vulcanisaeta moutnovskia
768-28]
Length = 318
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 8/185 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+ T D +L+GG+ I E +G G GKTQLC Q+ +++Q+SQ GV +Y+
Sbjct: 85 LRTNVRAIDELLQGGLEPKAIYEFAGEFGTGKTQLCHQLSVTVQLSQDKGGVGGAAVYLD 144
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQ-SGFIEN-KVGMIV 156
TE F R+ + + L + D I++ DL+ ++ +E +IV
Sbjct: 145 TEEAFSPGRIINIAQRFDLDPNETLDNIYVIKVINAADLEDRIKFDVVKLVEQANARLIV 204
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA-MTHSDKN 214
+DSI ++R + ++ +R + + +L ++ + + V+ TNQV M + +
Sbjct: 205 VDSIIALYRAEFKGRERLAERQQRLNYILDWLMRIAKLYNVYVVLTNQVLDVPMGYIEIK 264
Query: 215 IPALG 219
PA G
Sbjct: 265 RPAGG 269
>gi|328705511|ref|XP_001944618.2| PREDICTED: DNA repair protein RAD51 homolog 3-like [Acyrthosiphon
pisum]
Length = 332
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 53/243 (21%)
Query: 18 NKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQL 77
++++D+ K ++ + +D+ ++T + D +L GGI G ITELSGA G GK+QL
Sbjct: 51 SEIRDMLKTPKYKTAAD-LDIERDSIATFCKSIDELLNGGIQVGRITELSGAPGSGKSQL 109
Query: 78 CLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCE-------------------- 113
+Q+C+S+Q+ +G+ +Y+ T S F RL ++ +
Sbjct: 110 SMQLCVSVQIPVCFEGLQGEAIYVDTNSNFSELRLTEMIDAFLGHVSKVLSGPNDFKGAA 169
Query: 114 ----LSPLAKPKCSDKIFITHCYEFIDLKR------TLESQSGFIENKVGMIVIDSIAGI 163
L L KI H + DL + TLE V +IV+DS
Sbjct: 170 NSELLKSLTTAGMLSKI---HRVQMNDLNQLHALYTTLERHPN-----VKLIVVDSFVMP 221
Query: 164 F---RNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNI-PALG 219
N+ ++ V A D+ L ++++H + V+ TN +T+A+T S + PALG
Sbjct: 222 LYQVENSLRKNTLVHSALDL------LQTIAVEHDLAVLLTNDLTTAVTESGTEVFPALG 275
Query: 220 LTY 222
++
Sbjct: 276 ESF 278
>gi|300176345|emb|CBK23656.2| unnamed protein product [Blastocystis hominis]
Length = 316
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STG ++ D IL GG+ G ITEL G GKTQ+C +C+ Q+ G LYI
Sbjct: 80 ISTGCKELDRILGGGMETGSITELYGEFRTGKTQMCHTLCVICQLPISQGGGEGKALYID 139
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMIVI 157
TE+ F RL Q+ + L D + Y ++ L ++ + E++ ++++
Sbjct: 140 TENTFRPERLIQISKRFGLNPDDVLDNVTYARAYNSEHQQQLLIQAAALMAESRYALVIV 199
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS +FR Y + R + L +L+ + + V+ TNQV +
Sbjct: 200 DSATALFRTDYTGRGELSTRQQSLAQFLRGLQKLADEFGVAVVITNQVVA 249
>gi|213405411|ref|XP_002173477.1| RecA family ATPase Dmc1 [Schizosaccharomyces japonicus yFS275]
gi|212001524|gb|EEB07184.1| RecA family ATPase Dmc1 [Schizosaccharomyces japonicus yFS275]
Length = 332
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 25/219 (11%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGI 58
+LK+ GF E +V+K+K+ K A ++ ++ + I STGS+ FD++L GG+
Sbjct: 53 LLKIKGFSEAKVDKLKEAASKLCPANFATAMEISQSRKRVWSI--STGSKAFDAMLGGGV 110
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ ITE+ G CGKTQ+ +C++ Q+ + G V +I TE F R+ + E
Sbjct: 111 QSMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGAEGKVAFIDTEGTFRPDRIRAIAER 170
Query: 115 SPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
+ + + I ++ Y ++I T+ ++ G + ++++DSI +FR +
Sbjct: 171 FGVDADQAMENIIVSRAYNSEQQMDYITKLATIFAEDG----RYRLLIVDSIMALFRVDF 226
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + + L+ +S + + V TNQV +
Sbjct: 227 SGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQVQA 265
>gi|159041684|ref|YP_001540936.1| DNA repair and recombination protein RadA [Caldivirga
maquilingensis IC-167]
gi|157920519|gb|ABW01946.1| DNA repair and recombination protein RadA [Caldivirga
maquilingensis IC-167]
Length = 358
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG + D +L GGI ITEL+G G GKT C Q+ + +Q+ + G+ L+I
Sbjct: 123 ISTGVKALDELLGGGIETRAITELAGEFGSGKTNFCHQLSVMVQLPEDKGGLKGKALFID 182
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE------FIDLKRTLESQSGFIENKV 152
TE+ F R+ Q+ + L + IF Y ID E++ + +
Sbjct: 183 TENTFRPERIVQIAKYRGLDPKEALKNIFYARAYNSDHQMLIID-----EAKKIIPKENI 237
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----- 206
+IVIDS+ FR+ Y + +R + L +L+ + V+ TNQV +
Sbjct: 238 RLIVIDSLVAHFRSEYPGRENLAERQQKLNHHIAQLLKLADIYNAAVVVTNQVIAQPDMF 297
Query: 207 ---AMTHSDKNIPALGLTY 222
+ + N+ A G TY
Sbjct: 298 FGNPLKPAGGNVIAHGATY 316
>gi|320170723|gb|EFW47622.1| Rad51 protein [Capsaspora owczarzaki ATCC 30864]
Length = 337
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +++GS++ D +L+GG G ITE+ G GKTQ+C + ++ Q+ G LY
Sbjct: 98 VTLTSGSKELDKLLQGGFETGAITEIFGEFRTGKTQICHTLAVTCQLPTSQGGGEGKCLY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL E L+ P D + Y L +++ + E++ ++
Sbjct: 158 IDTEGTFRPERLLAAAERYGLSGPDVLDNVAYARAYNTDHQLALLMQASAMMAESRYALL 217
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----AMT 209
++DS ++R Y+ + R + L L+ + I V+ TNQV + AM
Sbjct: 218 IVDSATALYRTDYSGRGELSARQMHLAKFMRSLLRLADEFGIAVVVTNQVVAQVDGGAMF 277
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 278 AADPKKPIGG 287
>gi|367013438|ref|XP_003681219.1| hypothetical protein TDEL_0D04240 [Torulaspora delbrueckii]
gi|359748879|emb|CCE92008.1| hypothetical protein TDEL_0D04240 [Torulaspora delbrueckii]
Length = 461
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
ST D L GGIH GITE+ G S GK+QL +Q+ L++Q+ G+ +YI T
Sbjct: 87 STTDVSIDDALGGGIHTHGITEIFGESSTGKSQLLMQLSLAVQLPPKLGGLGGKCVYITT 146
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL ++ P K D IF C + ++ + L Q + E +
Sbjct: 147 EGDLPTQRLQEMIASRPEFKENGVSQDNIFTVSCNDLVNQEHILNVQLPILLENHEGAIK 206
Query: 154 MIVIDSI---------AGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+++IDSI + F++ Y+ + +A L L+ KH + ++ NQV
Sbjct: 207 LVIIDSISHHLRVELESKSFKDFQGNKFYIDQ------MAEGLLNLARKHLLAIVVANQV 260
>gi|187954697|gb|AAI41035.1| RAD51 homolog c (S. cerevisiae) [Mus musculus]
Length = 366
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 147 VFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENILSHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + KV +++ID IA FR+ ED + R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDL-EDLSL-RTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|395746014|ref|XP_003778373.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Pongo
abelii]
Length = 384
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSRACAPKMQTAYGIKAQRAADFSPAFLSTTLSALDEALHGGVACGSLTEVTGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT-- 129
Q C+ M + + G V+YI TES F RL ++ E + +K+ +T
Sbjct: 116 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPSYFNTEEKLLLTSS 175
Query: 130 --HCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDM 180
H Y + L+R + I + ++++DS+A + R +T + +R +
Sbjct: 176 KVHLYRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDTQLQGNLKERNKFL 235
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTSAMT 209
A L L+ + I VI TNQVT+ ++
Sbjct: 236 AREASSLKYLAEEFSIPVILTNQVTTHLS 264
>gi|297735394|emb|CBI17834.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 100/248 (40%), Gaps = 64/248 (25%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+NP+ +T + G D L GG+ ITEL SG GKTQLCLQ+ LS Q+
Sbjct: 8 QNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLG 67
Query: 93 GV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
G+ LYI +E FP+ RL QL + +S +
Sbjct: 68 GLAASSLYIHSEFPFPSRRLQQLSQ----------------------------SFRSSYS 99
Query: 149 ENKVGMIVIDSIAGIFRNTYAEDKY--VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V +IVIDSIA +FR + + +R+ ++ L L+ + + V+ TNQV
Sbjct: 100 HLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALAERFGLAVVVTNQVVD 159
Query: 207 AMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNIPAL 266
+ + GL R ++ L W + + AL
Sbjct: 160 FVGQAG------GLNGLRVGNLGSL-----------W-------------SSGRRVCAAL 189
Query: 267 GLSWSNLI 274
GLSW+N +
Sbjct: 190 GLSWANCV 197
>gi|16716605|ref|NP_444499.1| DNA repair protein RAD51 homolog 3 [Mus musculus]
gi|81902682|sp|Q924H5.1|RA51C_MOUSE RecName: Full=DNA repair protein RAD51 homolog 3; Short=R51H3;
AltName: Full=RAD51 homolog C; AltName: Full=RAD51-like
protein 2
gi|14276845|gb|AAK58420.1|AF324883_1 RAD51L2/RAD51C protein [Mus musculus]
gi|60422796|gb|AAH90648.1| RAD51 homolog c (S. cerevisiae) [Mus musculus]
gi|148683867|gb|EDL15814.1| Rad51 homolog c (S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 366
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 147 VFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENILSHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ + KV +++ID IA FR+ ED + R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDL-EDLSL-RTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALGESWGHAATIRLIFHW 308
>gi|50555670|ref|XP_505243.1| YALI0F10307p [Yarrowia lipolytica]
gi|49651113|emb|CAG78050.1| YALI0F10307p [Yarrowia lipolytica CLIB122]
Length = 421
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 28/191 (14%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+ P+D +STG K D+++ GG G + E++G S GK+ LQ+C+++Q+++
Sbjct: 85 ERPLD----AISTGVRKIDTVMNGGFPTGTLCEVAGESAAGKSHFLLQLCVNVQLARGEG 140
Query: 93 GV----LYICTESVFPTARLAQLCE-----------LSPLAKPKCSDKIFITHCYEFIDL 137
G+ ++I TES T RL Q+ + L ++ C D +++ +L
Sbjct: 141 GLGKKAVFISTESGLETRRLVQMMDHVIKLGHDNISLHHVSFIACKDLEQQDRVFQY-NL 199
Query: 138 KRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLA--HYLHELSIKHR 195
LE S G++VIDS+A +R+ K + D R L H+L L+ KH
Sbjct: 200 PNLLEDSS------YGLVVIDSLAAHYRSEELTSKGDFSSRDKRLLRTLHHLKGLARKHN 253
Query: 196 IVVICTNQVTS 206
+ V+ NQ+++
Sbjct: 254 VAVVFANQISA 264
>gi|302658072|ref|XP_003020745.1| DNA repair protein (Rad57), putative [Trichophyton verrucosum HKI
0517]
gi|291184605|gb|EFE40127.1| DNA repair protein (Rad57), putative [Trichophyton verrucosum HKI
0517]
Length = 600
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST DS L GGI G +TE++G SG GKTQ L + LS+Q+ PH K LYI T
Sbjct: 120 ISTLDPILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPHGLSKNALYIST 179
Query: 100 ESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKV 152
ES T RL+QL L P D I+ + LESQ I +V
Sbjct: 180 ESDLATNRLSQLINEHQTLQALHPETPRPSLDNIYSVTTVD-------LESQEHIINYQV 232
Query: 153 GMIV---------IDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ + IDSI +R +T + ++R+ ++ L H+L L++ H I V+
Sbjct: 233 PVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAVTHNIAVVV 292
Query: 201 TNQVTSAMTHS 211
NQ++ S
Sbjct: 293 ANQISDGFESS 303
>gi|358255195|dbj|GAA56912.1| DNA repair protein RAD51 homolog 3, partial [Clonorchis sinensis]
Length = 1681
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 100/228 (43%), Gaps = 37/228 (16%)
Query: 28 AFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV 87
AF ++ + + +VS FD +L GG G +TEL G G GKTQ C+Q CL++Q+
Sbjct: 1396 AFASPQSTTVIPDFIVSM-CRSFDEMLGGGFPTGRLTELCGEPGVGKTQFCIQTCLTVQL 1454
Query: 88 SQPHKGV----LYICTESVFPTARLAQLCEL---------------SPLAK-------PK 121
+ G+ ++I +E F R Q+ E PL K P
Sbjct: 1455 PRWFGGLEGEAVFIDSEGNFVPRRAKQMAESLVTHCRRHVELDVDDEPLTKEFRNHYCPN 1514
Query: 122 CSDKIFITHCYEFID---LKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQR 176
+ H D L T + F E KV ++V+DSIA FR Y D QR
Sbjct: 1515 VDSLLSGIHYIRVTDHLQLLATCKRLQQFCEQHPKVRLVVVDSIALPFR--YDFDDIPQR 1572
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAM---THSDKNIPALGLT 221
+ +A L ++ ++ VVI TNQ+T+ + SD+N P T
Sbjct: 1573 NRLLACVAQQLLSVATNYKAVVILTNQITTRIETRVKSDENPPGSDYT 1620
>gi|384501022|gb|EIE91513.1| hypothetical protein RO3G_16224 [Rhizopus delemar RA 99-880]
Length = 207
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 30 QVGKNPIDM-TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
QVG I + ++ +++TG E FD ILKGGI G ITE+ G S GKTQL LQ+CLS+Q
Sbjct: 67 QVGNELIGIESQTMLTTGDEIFDDILKGGIPLGTITEVVGESSSGKTQLGLQLCLSVQKP 126
Query: 89 QPHKGV----LYICTESVFPTARLAQLCE 113
G+ +YI +E FP+ARL QL +
Sbjct: 127 ILEGGLEGSAVYIHSEGPFPSARLNQLVD 155
>gi|16903198|gb|AAL27842.1| RAD51C protein [Chlamydomonas reinhardtii]
Length = 352
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 47 SEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESV 102
+ D++L GG+ AG +TE G G GKTQL +Q+ +++Q+ S P +YI TE
Sbjct: 97 ARDLDALLGGGVAAGQVTEFCGVPGVGKTQLGMQLAVNVQIPRSLSGPEGQAVYIDTEGS 156
Query: 103 FPTARLAQLCELS-------------------------PLAKPKCSDKIFITHCYEFIDL 137
F R A + E + P I++ ++ ++
Sbjct: 157 FMAERCADIAEGAVRHVQSILEKKASMGQPELLHDGERPFTLENVMRGIYLFRVHDHVEQ 216
Query: 138 KRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHR 195
+ F+E ++V +IVIDS+ FR + + QR + +A L L+ H
Sbjct: 217 LGLVNMLPRFLEQYSQVRLIVIDSVTFHFRQDFPD--MAQRTRVVTGMAQQLISLAQTHN 274
Query: 196 IVVICTNQVTSAMTH--SDKNIPALGLTYERAHDMR 229
+ V+ NQVT+ + K +PALG ++ A R
Sbjct: 275 VAVVLMNQVTTKVLEGGGSKLVPALGESWGHAASTR 310
>gi|449481824|ref|XP_002195715.2| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Taeniopygia guttata]
Length = 339
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V VSTGS++FD +L GGI + ITE
Sbjct: 63 GLSEAKVDKIKEAANKLVEPGFLTAFEYSEKRKMVFHVSTGSQEFDKLLGGGIESMAITE 122
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P+ +++I TE+ F RL + + +
Sbjct: 123 AFGEFRTGKTQLSHTLCVTAQLPGPNGYTGGKIIFIDTENTFRPDRLRDIADRFNVDHEA 182
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 183 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 238
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 239 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 271
>gi|340376025|ref|XP_003386534.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Amphimedon
queenslandica]
Length = 345
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++LKGGI G ITE+ G GKTQLC + ++ Q+ + G LY
Sbjct: 105 IQITTGSKELDTLLKGGIETGSITEIFGEFRTGKTQLCHMLAVTCQLPIDNGGGEGKCLY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I +E F RL + E L+ D + Y D + L Q+ + E + +
Sbjct: 165 IDSEGTFRPERLLAVAERYNLSGADVLDNVAYARAYN-TDHQSQLLLQAAAMMSETRYAL 223
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSA 207
+V+DS ++R Y+ + R + L LS + + V+ TNQV +A
Sbjct: 224 LVVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLSDEFGVAVVITNQVVAQVDGAAA 283
Query: 208 MTHSDKNIPALG 219
M +D P G
Sbjct: 284 MFSADPKKPIGG 295
>gi|395849624|ref|XP_003797421.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Otolemur garnettii]
Length = 350
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+ D+ +ST D L GG+ G +TE++G GCGKTQ C+ M + +
Sbjct: 73 RRSADVAPAFLSTTLPALDEALCGGVACGSLTEITGPPGCGKTQFCMMMSVLATLPTNMG 132
Query: 93 G----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRT 140
G V+Y+ TES F RL ++ E + +K+ +T H Y + L+R
Sbjct: 133 GLDGAVVYVDTESAFSAERLVEIAESRFPSYFNAEEKLLLTSSKVHLYRELSCDEVLQRI 192
Query: 141 LESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIV 197
+ I V +++IDS+A + R +T + +R + A L L+ + I
Sbjct: 193 ESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNLKERNRFLAREASSLKYLAEEFSIP 252
Query: 198 VICTNQVTS 206
VI TNQ+T+
Sbjct: 253 VILTNQITT 261
>gi|225714670|gb|ACO13181.1| DNA repair protein RAD51 homolog 1 [Lepeophtheirus salmonis]
Length = 350
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I ++TGS++ D +LKGGI G ITEL G GK+QLC + ++ Q+ H G LY
Sbjct: 111 IQITTGSKELDKLLKGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDHGGAEGKCLY 170
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + Y + L S + E + +I
Sbjct: 171 IDTEGTFRPERLLAVAERYNLSGNDVLDNVAYARAYNSDHQSQLLIQASAMMAELRYALI 230
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 231 IVDSSTALYRTDYSGRGELSTRQMHLARFLRMLLRLADEFGVGVVITNQVVAQVDGAAMF 290
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 291 SADPKKPIGG 300
>gi|156842362|ref|XP_001644549.1| hypothetical protein Kpol_1052p39 [Vanderwaltozyma polyspora DSM
70294]
gi|156115194|gb|EDO16691.1| hypothetical protein Kpol_1052p39 [Vanderwaltozyma polyspora DSM
70294]
Length = 334
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP------IDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
G + +V K+K+ K QVG P I + +STGS++ DSIL GGI IT
Sbjct: 59 GLSDIKVEKIKE-AAGKIIQVGFIPATIQLNIRQRVLSLSTGSKQLDSILGGGIMTMSIT 117
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE---LSPL 117
E+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+ E L P
Sbjct: 118 EVFGEFRCGKTQMAHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAERYNLDPD 177
Query: 118 AKPKCSDKIFITHCYEFIDLKRTLES--QSGFIENKVG---------MIVIDSIAGIFRN 166
A C E + R L S Q +E K+G +IV+DSI FR
Sbjct: 178 A------------CLENVSYARALNSEHQMELVE-KLGEDLSSGEYRLIVMDSIMANFRV 224
Query: 167 TY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
Y + +R + L+ ++ + + V TNQV S
Sbjct: 225 DYCGRGELNERQQKLNQHLFKLNRVAEEFNVAVFMTNQVQS 265
>gi|448508687|ref|XP_003865980.1| Rad51 protein [Candida orthopsilosis Co 90-125]
gi|380350318|emb|CCG20539.1| Rad51 protein [Candida orthopsilosis Co 90-125]
Length = 368
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 124 ICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 183
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ C D + Y L + + E++ ++
Sbjct: 184 IDTEGTFRPNRLVSIAERYGLSPNDCLDNVAYARAYNAEHQLNLLHLAAQMMAESRFSLL 243
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SAM 208
++DSI ++R YA + R + L L+ + I V+ TNQV S M
Sbjct: 244 IVDSIMSLYRTDYAGRGELSARQTSVAKFMRTLQRLADEFGIAVVITNQVVAQVDGMSGM 303
Query: 209 THSDKNIPALG 219
+ D P G
Sbjct: 304 YNPDPKKPIGG 314
>gi|444720807|gb|ELW61576.1| DNA repair protein RAD51 like protein 3 [Tupaia chinensis]
Length = 367
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIVTFCSALDNILGGGIPLMKTTEICGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C++
Sbjct: 147 IFIDTEGSFMVDRVVDLATACIQHLHLIAGTHMEEEHQKALEDFTLENILSHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLQDFLLEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ V+ TNQ+T+ + DKN +PALG ++ A +R + H+
Sbjct: 265 NSHRLAVLLTNQMTTKI---DKNQASLVPALGESWGHAATIRLIFHW 308
>gi|317143045|ref|XP_001818770.2| DNA repair protein (Rad57) [Aspergillus oryzae RIB40]
Length = 600
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GGI G +TE++G SG GKTQ L + L++Q+ P K +YI
Sbjct: 140 AISTLDTALDELLGGGIPTGYVTEVTGESGSGKTQFLLSLLLAVQLPSPKGLGKNAVYIS 199
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK------- 151
TE+ T RL+QL +P D+ I+ LESQ + +
Sbjct: 200 TEAPLSTPRLSQLINSNPYLSTLPRDRAPTLENILSIN-AMDLESQDHILNYQLPVAIQR 258
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + + R+ ++ L L L+++ I ++ NQV+
Sbjct: 259 YNVGLVVIDSITSNYRAEHTSHNILGLSTRSGELTKLGQMLRNLAVQEDIAIVVANQVS 317
>gi|448091818|ref|XP_004197422.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
gi|448096395|ref|XP_004198453.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
gi|359378844|emb|CCE85103.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
gi|359379875|emb|CCE84072.1| Piso0_004675 [Millerozyma farinosa CBS 7064]
Length = 355
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 111 ICITTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 170
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIEN 150
I TE F RL + + L C D + H ++ ++L + ++S F
Sbjct: 171 IDTEGTFRPVRLVSIAQRYGLNPDDCLDNVAYARAYNADHQFQLLNLAAQMMAESRF--- 227
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV----- 204
++++DSI ++R Y+ + R + L L+ + I V+ TNQV
Sbjct: 228 --SLLIVDSIMSLYRTDYSGRGELSARQSHVAKYMRTLQRLADEFGIAVVITNQVVAQVD 285
Query: 205 -TSAMTHSDKNIPALG 219
SAM + D P G
Sbjct: 286 GASAMFNPDPKKPIGG 301
>gi|159905833|ref|YP_001549495.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis C6]
gi|226736608|sp|A9AA90.1|RADA_METM6 RecName: Full=DNA repair and recombination protein RadA
gi|159887326|gb|ABX02263.1| DNA repair and recombination protein RadA [Methanococcus
maripaludis C6]
Length = 322
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-------------- 88
+STGS++ D++L GG+ + +TE +G G GKTQ+ Q C++LQ++
Sbjct: 80 LSTGSKELDTVLAGGLESQSVTEFAGMYGSGKTQIMHQSCVNLQIAGKIYADLEGVVEEE 139
Query: 89 QPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
+ +YI TE F R+ Q+ E + D F+ Y D++ E
Sbjct: 140 LENPKAVYIDTEGTFRPERVVQMAEGLGIDGQLVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ + +V+ TNQV
Sbjct: 199 IKSGNNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|345805658|ref|XP_537695.3| PREDICTED: DNA repair protein RAD51 homolog 3 isoform 1 [Canis
lupus familiaris]
Length = 337
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTARLAQLC---------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R+ L L I+ C +
Sbjct: 147 VFIDTEGSFMVDRVVDLATACIQHLHLIAGRHMGEEHSKALEDFTLENILSHIYYFRCRD 206
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ V+ TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 265 NNHRLAVLLTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 308
>gi|297695369|ref|XP_002824917.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 1 [Pongo
abelii]
Length = 350
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSRACAPKMQTAYGIKAQRAADFSPAFLSTTLSALDEALHGGVACGSLTEVTGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH- 130
Q C+ M + + G V+YI TES F RL ++ E + +K+ +T
Sbjct: 116 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPSYFNTEEKLLLTSS 175
Query: 131 ---------CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAH 178
C E + +LE + I + ++++DS+A + R +T + +R
Sbjct: 176 KVHLYRELTCDEVLQRIESLEEE--IISKGIKLVILDSVASVVRKEFDTQLQGNLKERNK 233
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ A L L+ + I VI TNQVT+
Sbjct: 234 FLAREASSLKYLAEEFSIPVILTNQVTT 261
>gi|256268991|gb|EEU04334.1| Rad57p [Saccharomyces cerevisiae JAY291]
Length = 460
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 30/206 (14%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 220
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++IDSI+ FR + Y+ R A ++ LAH + + V+ NQ
Sbjct: 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQ 273
Query: 204 VTSAMTHSDKNIPALGLTYERAHDMR 229
V + N P TY +D +
Sbjct: 274 VGDKLL---ANSPVAHRTYVTDYDYQ 296
>gi|150865083|ref|XP_001384154.2| hypothetical protein PICST_58642 [Scheffersomyces stipitis CBS
6054]
gi|149386339|gb|ABN66125.2| DNA-repair [Scheffersomyces stipitis CBS 6054]
Length = 541
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 27/182 (14%)
Query: 28 AFQVGKNPIDMTEIV------VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM 81
AF+ P +T+++ +STG DS L GGI G ITE+ G+SGCGK+ + Q+
Sbjct: 67 AFKKRNKPKSVTDMIKSPSKFISTGLHTLDSDLGGGIPTGEITEIFGSSGCGKSHMLAQL 126
Query: 82 CLSLQVSQPH-KGVLYICTESVFPTARLAQLCELSPLAKPKCS-DKIFITHCYE------ 133
+ Q+++ K ++I TES T RL Q+ + S D I +C +
Sbjct: 127 AMECQLNEGDCKECIHIGTESFLETKRLHQIQQSYESKGSTVSLDNISYIYCQDLESQDH 186
Query: 134 --FIDLKRTLESQSGFIENKVGMIVIDSIAGIFR-------NTYAEDKYVQRAHDMRDLA 184
+ L LES++G KV ++VIDSIA R + Y E++ Q+ D++D
Sbjct: 187 IIYTQLPIHLESKAG----KVRLLVIDSIAQHLRREGSLSNSMYLEERIKQQEKDLKDCE 242
Query: 185 HY 186
Y
Sbjct: 243 DY 244
>gi|119614840|gb|EAW94434.1| RAD51 homolog C (S. cerevisiae), isoform CRA_e [Homo sapiens]
Length = 380
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 96 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 155
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 156 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 215
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 216 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 273
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 274 NNHRLAVILTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 317
>gi|403274804|ref|XP_003929151.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Saimiri boliviensis
boliviensis]
Length = 337
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 36/216 (16%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D+IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV ++I TE F
Sbjct: 98 LDNILGGGVPLMKTTEICGAPGIGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMV 157
Query: 106 ARLAQLC---------------------ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQ 144
R+ L L I+ C ++ +L +
Sbjct: 158 DRVVDLATACIQHLHLIAEKHKGEEHRKALEDFTLENILSHIYYFRCRDYTELLAQVYLL 217
Query: 145 SGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
F+ +KV ++++D IA FR+ D R + LA + L+ HR+ VI TN
Sbjct: 218 PTFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLANNHRLAVILTN 275
Query: 203 QVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
Q+T+ + +KN IPALG ++ A +R + H+
Sbjct: 276 QMTTKI---NKNQALLIPALGESWGHAATIRLIFHW 308
>gi|448525707|ref|XP_003869178.1| Elp4 protein [Candida orthopsilosis Co 90-125]
gi|380353531|emb|CCG23041.1| Elp4 protein [Candida orthopsilosis]
Length = 324
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ K F ++ E V ++TGS +FD +L GG+ + ITE
Sbjct: 50 GLSEVKVEKIKEAAGKIQTIGFVSASVVAELRESVFKITTGSNQFDEMLGGGVTSMSITE 109
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE---LSPLA 118
+ G CGKTQLC +C++ Q+++ G V +I TE F R+ + E + PL
Sbjct: 110 VFGEYRCGKTQLCHTLCVAAQLTKSLGGAEGKVAFIDTEGTFRPERIKAIAERFGVDPLT 169
Query: 119 KPKCSDKIFITHCYEFIDLKRTLESQ----------SGFIENKVGMIVIDSIAGIFRNTY 168
C E I R L S+ + +++IDSI FR Y
Sbjct: 170 ------------CLENISYARALNSEHQIELVEQLGTELATGSYRLLIIDSILACFRVDY 217
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + YL +S + + V TNQV S
Sbjct: 218 SGRGELNERQQKLNQHLAYLTRVSEDYNVAVFLTNQVQS 256
>gi|384487459|gb|EIE79639.1| DNA repair protein RAD51 [Rhizopus delemar RA 99-880]
Length = 344
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I ++TGS++ D IL GGI G ITEL G GK+QLC + +S Q+S + G LY
Sbjct: 105 IYITTGSKELDKILGGGIETGSITELFGEFRTGKSQLCHTLAVSCQLSMENGGAEGKCLY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL--ESQSGFIENKVGM 154
I TE F +R+ + L C + I Y D + L ++ S E + +
Sbjct: 165 IDTEGTFRPSRILSIATRFGLDTEICLNNIAYARAYN-ADHQAALLFQASSMMAETRFSL 223
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
+++DS+ ++R +A + R + L ++ + + ++ TNQ+ S +
Sbjct: 224 LIVDSVIALYRTDFAGRGELSLRQMHLGKFLRSLQRIADEFGVAIVITNQMLSTV 278
>gi|312090474|ref|XP_003146628.1| rad51 [Loa loa]
gi|307758208|gb|EFO17442.1| DNA repair protein RAD51 [Loa loa]
Length = 360
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 36 IDMTEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV 94
I +EI+ ++TGS + D +L GG+ G ITE+ G GK+QLC + + Q+ G
Sbjct: 114 IKRSEIIQIATGSRELDRLLGGGVETGSITEIFGEFRTGKSQLCHTLAVMCQLPVDMGGA 173
Query: 95 ----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIE 149
L+I TE F RL + E L+ D + C+ ++ ++ + E
Sbjct: 174 EGKCLWIDTEGTFRPERLLAIAERHKLSSQDVLDNVVYARCHNTDHQMQLLIQGSAMMAE 233
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++ ++V+DS +FR Y+ + M LA YL +LS + + V+ TNQV S
Sbjct: 234 SRYALLVVDSATALFRTDYSGRGELASRQTM--LAKYLRMLLKLSDEFGVAVVITNQVVS 291
>gi|17402896|ref|NP_478123.1| DNA repair protein RAD51 homolog 3 isoform 1 [Homo sapiens]
gi|3914534|sp|O43502.1|RA51C_HUMAN RecName: Full=DNA repair protein RAD51 homolog 3; Short=R51H3;
AltName: Full=RAD51 homolog C; AltName: Full=RAD51-like
protein 2
gi|2909801|gb|AAC39604.1| Rad51C [Homo sapiens]
gi|47777661|gb|AAT38108.1| RAD51 homolog C (S. cerevisiae) [Homo sapiens]
gi|78070501|gb|AAI07754.1| RAD51 homolog C (S. cerevisiae) [Homo sapiens]
gi|119614839|gb|EAW94433.1| RAD51 homolog C (S. cerevisiae), isoform CRA_d [Homo sapiens]
gi|261860596|dbj|BAI46820.1| RAD51 homolog C [synthetic construct]
Length = 376
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 96 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 155
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 156 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 215
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 216 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 273
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + D+N +PALG ++ A +R + H+
Sbjct: 274 NNHRLAVILTNQMTTKI---DRNQALLVPALGESWGHAATIRLIFHW 317
>gi|157112162|ref|XP_001657421.1| DNA repair protein rad51 [Aedes aegypti]
gi|108878168|gb|EAT42393.1| AAEL006080-PA [Aedes aegypti]
Length = 341
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITEL G GKTQ+C + ++ Q+ G LY
Sbjct: 102 IQLTTGSKELDKLLGGGIETGSITELFGEFRTGKTQICHTLAVTCQLPVSQNGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L D + + +K +++ + +E++ ++
Sbjct: 162 IDTEGTFRPERLLAVAERYKLVGTDVLDNVVYARAFNSDHQMKLLVQASAMMVESRYALL 221
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-----TSAMT 209
++DS +FR Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 222 IVDSATALFRTDYSGRGELNARQVQLGKFLRMLLRLADEFGVAVVITNQVVAQVDAAAMF 281
Query: 210 HSDKNIPALG 219
D P G
Sbjct: 282 TPDPKKPIGG 291
>gi|298676052|ref|YP_003727802.1| DNA repair and recombination protein RadA [Methanohalobium
evestigatum Z-7303]
gi|298289040|gb|ADI75006.1| DNA repair and recombination protein RadA [Methanohalobium
evestigatum Z-7303]
Length = 325
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 26/202 (12%)
Query: 22 DLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM 81
DL ++ QVGK +STG +FD +++GGI ITEL G G GKTQ+ Q+
Sbjct: 70 DLVMERRKQVGK---------LSTGCSEFDEMMEGGIDTQSITELYGEFGSGKTQIAHQL 120
Query: 82 CLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSP------LAKPKCSDKIFITHC 131
+++Q+ G V++I TE+ F R+ Q+ + + + I +
Sbjct: 121 AVNVQLPNEQGGLNGSVIFIDTENTFRPERIKQMVQGASEHHNIDYDPEEFLKNIHVARA 180
Query: 132 YE------FIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLA 184
Y +D L +S E V ++++DS+ FR Y R +
Sbjct: 181 YNSNHQILLMDSAMELAEESKNWEQPVRLLIVDSLTAHFRAEYIGRGTLADRQQKLNKHL 240
Query: 185 HYLHELSIKHRIVVICTNQVTS 206
H L S + V+I TNQV S
Sbjct: 241 HALQRFSDLYNAVIIVTNQVMS 262
>gi|116245799|ref|XP_001230756.1| AGAP003791-PA [Anopheles gambiae str. PEST]
gi|116130977|gb|EAU77376.1| AGAP003791-PA [Anopheles gambiae str. PEST]
Length = 290
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 47/228 (20%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTE-SVFP 104
D L GI G ITEL G G GKTQLCLQ+ +++Q+ Q G+ +Y+ T FP
Sbjct: 26 LDLALGSGIPEGMITELCGPPGSGKTQLCLQLAVNVQIPQQLGGLQGRAVYLDTNYGFFP 85
Query: 105 T-------------ARLAQLCELSP------LAKPKCSDKIF---ITHCYEFIDLKRTLE 142
A +A L +L+P ++ D I +T+C + ++ L+
Sbjct: 86 QRVQEMAKACHNHCANIALLHKLNPEETLAGFSEATALDNILYSHVTNCTQILEAIAVLQ 145
Query: 143 SQSGFIENKVGMIVIDSIAGIFRNTYAED-KYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
++ + K+ +IV+DS++ + RNT K V+R H++ L LH+L+ + VVI T
Sbjct: 146 NRL-YDGEKIKLIVLDSLSFLIRNTNTRSMKRVKRVHEILTL---LHKLAHRFGCVVIVT 201
Query: 202 NQVTSAMTHSDKN----------IPALG--LTY---ERAHDMRDLAHY 234
N VT+ ++ D +PALG LT+ +R RD +H+
Sbjct: 202 NDVTTRISDVDGGGGERPDVPQIVPALGGSLTHKVNQRIFLGRDESHF 249
>gi|83766628|dbj|BAE56768.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868385|gb|EIT77600.1| DNA repair protein [Aspergillus oryzae 3.042]
Length = 610
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D +L GGI G +TE++G SG GKTQ L + L++Q+ P K +YI
Sbjct: 150 AISTLDTALDELLGGGIPTGYVTEVTGESGSGKTQFLLSLLLAVQLPSPKGLGKNAVYIS 209
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK------- 151
TE+ T RL+QL +P D+ I+ LESQ + +
Sbjct: 210 TEAPLSTPRLSQLINSNPYLSTLPRDRAPTLENILSIN-AMDLESQDHILNYQLPVAIQR 268
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG++VIDSI +R + + R+ ++ L L L+++ I ++ NQV+
Sbjct: 269 YNVGLVVIDSITSNYRAEHTSHNILGLSTRSGELTKLGQMLRNLAVQEDIAIVVANQVS 327
>gi|115437842|ref|NP_001043394.1| Os01g0578000 [Oryza sativa Japonica Group]
gi|13161340|dbj|BAB32931.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group]
gi|20521295|dbj|BAB91810.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group]
gi|113532925|dbj|BAF05308.1| Os01g0578000 [Oryza sativa Japonica Group]
gi|215686387|dbj|BAG87648.1| unnamed protein product [Oryza sativa Japonica Group]
gi|343466352|gb|AEM43048.1| RAD51C-1 [Oryza sativa]
Length = 349
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS ++IL GGIH +TE+ G G GKTQL +Q+ +++Q+ + G+ +YI
Sbjct: 90 INTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYID 149
Query: 99 TESVFPTARLAQLCE---------------LSPLAKPKCSDKIFITHCYEF--------I 135
TE F R+ Q+ E +P + K + F+ Y F I
Sbjct: 150 TEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIYYFRICSYTEQI 209
Query: 136 DLKRTLESQSGFIENK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKH 194
+ LE G E+K V +++IDS+ FR + D R + L+ L +LS +
Sbjct: 210 AVINYLEKFLG--EHKDVRIVIIDSVTFHFRQDF--DDMALRTRVLSGLSLKLMKLSKAY 265
Query: 195 RIVVICTNQVTSAMTHS 211
+ V+ NQVT+ T
Sbjct: 266 NLAVVLLNQVTTKFTEG 282
>gi|312373767|gb|EFR21456.1| hypothetical protein AND_17022 [Anopheles darlingi]
Length = 223
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKP----- 120
++G G GKTQ+ L++ L Q P V++I TE FP+ RL Q+ P
Sbjct: 1 MAGDPGTGKTQIALKLALEAQRQVPGTSVVFISTEHPFPSGRLLQMEAALKRQHPHDPFV 60
Query: 121 ---KCSDKIFITH-----CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDK 172
+D+I + H C F L LES V +++IDS+ G F ED
Sbjct: 61 QQHNFADRILVEHLSLMNCL-FQQLPNLLES------TPVSLLIIDSMTGPF---IGEDD 110
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-----TSAMTHSDKNIPALGLTY 222
Y+ RA R + +L ++ + V NQV +S DK IPALGL++
Sbjct: 111 YIGRADTYRLIVKHLQLFQEQYNMAVYVNNQVRCLIDSSGSQTKDKYIPALGLSW 165
>gi|354544865|emb|CCE41590.1| hypothetical protein CPAR2_801420 [Candida parapsilosis]
Length = 377
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 133 ICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLTVTCQLPIDMGGGEGKCLY 192
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ C D + Y L + + E++ ++
Sbjct: 193 IDTEGTFRPNRLVSIAERYGLSPNDCLDNVAYARAYNAEHQLNLLHLAAQMMAESRFSLL 252
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SAM 208
++DSI ++R YA + R + L L+ + I V+ TNQV S M
Sbjct: 253 IVDSIMSLYRTDYAGRGELSARQTSVAKFMRTLQRLADEFGIAVVITNQVVAQVDGMSGM 312
Query: 209 THSDKNIPALG 219
+ D P G
Sbjct: 313 YNPDPKKPIGG 323
>gi|222618725|gb|EEE54857.1| hypothetical protein OsJ_02328 [Oryza sativa Japonica Group]
Length = 349
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS ++IL GGIH +TE+ G G GKTQL +Q+ +++Q+ + G+ +YI
Sbjct: 90 INTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYID 149
Query: 99 TESVFPTARLAQLCE---------------LSPLAKPKCSDKIFITHCYEF--------I 135
TE F R+ Q+ E +P + K + F+ Y F I
Sbjct: 150 TEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIYYFRICSYTEQI 209
Query: 136 DLKRTLESQSGFIENK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKH 194
+ LE G E+K V +++IDS+ FR + D R + L+ L +LS +
Sbjct: 210 AVINYLEKFLG--EHKDVRIVIIDSVTFHFRQDF--DDMALRTRVLSGLSLKLMKLSKAY 265
Query: 195 RIVVICTNQVTSAMTHS 211
+ V+ NQVT+ T
Sbjct: 266 NLAVVLLNQVTTKFTEG 282
>gi|345308874|ref|XP_001519391.2| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Ornithorhynchus anatinus]
Length = 296
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 16/176 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYIC 98
V+TGS++FD +L GGI + ITE G GKTQL +C++ Q+ P +++I
Sbjct: 57 VTTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 116
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY------EFID-LKRTLESQSGFIENK 151
TE+ F RL + + L D + Y E +D + ++G +
Sbjct: 117 TENTFRPDRLRDIADRFNLDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK-- 174
Query: 152 VGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDSI +FR ++ + +R + + L ++S ++ + V TNQ+TS
Sbjct: 175 --LLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTS 228
>gi|335292717|ref|XP_003128695.2| PREDICTED: DNA repair protein RAD51 homolog 2 [Sus scrofa]
Length = 350
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVSQPHKGVLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M L + + V+YI
Sbjct: 83 LSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y + L+R + I
Sbjct: 143 TESAFSAERLVEMAESRFPRYFSTEEKLLLTVSKVHLYRELSCDEVLQRIESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V +++IDS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 203 GVKLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITT 261
>gi|310794671|gb|EFQ30132.1| DNA repair protein RAD57 [Glomerella graminicola M1.001]
Length = 462
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 22/183 (12%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST + D L GG+ G +TE++G SG GKTQL L + L++Q+ P+ + LYI
Sbjct: 94 TISTLDDDLDRALGGGLPTGYVTEVTGESGVGKTQLLLSLLLAVQLPPPYGLGRPALYIT 153
Query: 99 TESVFPTARLAQL-------CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IEN 150
TE+ T RL+Q+ +L P +P D I T + + L+ Q +E
Sbjct: 154 TEAQLSTIRLSQMLSANPRFADLPPGDRPSL-DGISSTSTPDLESQEHILQFQVPVEVER 212
Query: 151 K-VGMIVIDSIAGIFRNTYAEDKYVQ--------RAHDMRDLAHYLHELSIKHRIVVICT 201
+ G+IV+DS+A +R + E +V R+ ++ L L EL+ K+ + V+
Sbjct: 213 RNTGLIVLDSVASNYRAEF-ERGHVSSLGSNMGARSTELTRLGALLRELAQKYNLAVVVA 271
Query: 202 NQV 204
NQV
Sbjct: 272 NQV 274
>gi|392348948|ref|XP_576058.4| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD51 homolog
2-like [Rattus norvegicus]
Length = 350
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKG 93
++ +ST D L GG+ G +TE++G GCGKTQ C+ M L ++
Sbjct: 78 LSPAFLSTTLGALDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGA 137
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-----CYEFI--DLKRTLES-QS 145
VLYI TES F RL ++ E +K+ +T C E L + LES +
Sbjct: 138 VLYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEE 197
Query: 146 GFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I V ++++DSIA + R + + +R + A L LS + + VI TN
Sbjct: 198 EIISKGVKLVIVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPVILTN 257
Query: 203 QVTSAMTHSDKNIPALGLTYERAHDM 228
Q+T TH +P+ A D+
Sbjct: 258 QIT---THLSGALPSQADLVSPADDL 280
>gi|302500272|ref|XP_003012130.1| DNA repair protein (Rad57), putative [Arthroderma benhamiae CBS
112371]
gi|291175686|gb|EFE31490.1| DNA repair protein (Rad57), putative [Arthroderma benhamiae CBS
112371]
Length = 599
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 29/191 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST DS L GGI G +TE++G SG GKTQ L + LS+Q+ PH K LYI T
Sbjct: 119 ISTLDPILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPHGLSKNALYIST 178
Query: 100 ESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKV 152
ES T RL+QL L P D I+ + LESQ I ++
Sbjct: 179 ESDLATNRLSQLINEHQTLQALHPETPRPSLDNIYSVTTVD-------LESQEHIINYQI 231
Query: 153 GMIV---------IDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ + IDSI +R +T + ++R+ ++ L H+L L++ H I V+
Sbjct: 232 PVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAVTHNIAVVV 291
Query: 201 TNQVTSAMTHS 211
NQ++ + S
Sbjct: 292 ANQISDSFESS 302
>gi|225680556|gb|EEH18840.1| DNA repair and recombination protein radA [Paracoccidioides
brasiliensis Pb03]
Length = 337
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAVQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDSILAG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F ++ +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENIAYARALNSEHQLELLNTLSKE--FAGSEYRLLIIDSIMNCFRVDYC 229
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|430812109|emb|CCJ30445.1| unnamed protein product [Pneumocystis jirovecii]
Length = 353
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
GF + +V+K+K++ +K FQ V +STGS++FD++L GGI + ITE
Sbjct: 63 GFSDAKVDKLKEIIQKLCPPPFQTAMEVSSFRRRVNYISTGSKQFDAMLGGGIQSMSITE 122
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G CGKTQ+ MC++ Q+ + G Y+ TE F R+ + + +
Sbjct: 123 VFGEFRCGKTQISHTMCVTCQLPREMGGAEGKAAYLDTEGTFRPDRIKSIAARFGVDAEQ 182
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
+ I + + + I+ T+ S+ G + ++++DSI +FR Y+ +
Sbjct: 183 AMNNILVGRAFNSEHQMDLINKMCTIFSEDG----RYRLLIVDSIMALFRVDYSGRGELS 238
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+R + + L+ ++ ++ I V TNQ
Sbjct: 239 ERQQKLNVMLSRLNRIAEEYNIAVFLTNQ 267
>gi|134118469|ref|XP_772121.1| hypothetical protein CNBM1660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254728|gb|EAL17474.1| hypothetical protein CNBM1660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 330
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSILKGGIHA 60
+LK+ G E +V K+K+ K AF G D VV +TGS+ D++L GGI
Sbjct: 50 LLKIKGLSEAKVEKLKETCTKILPPAFLTGTEIADRRANVVYITTGSKSVDAMLGGGIAT 109
Query: 61 GGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSP 116
ITE+ G GKTQLC +C+S Q+ + G V YI TE F R+ + +
Sbjct: 110 QSITEVFGEYRTGKTQLCHTLCVSTQLPEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFG 169
Query: 117 LAKPKCSDKIFIT-------HCYEFIDLKRTLESQSGFIENKV-GMIVIDSIAGIFRNTY 168
+ D + C +DL F+E + ++++DSI +FR Y
Sbjct: 170 VDSNMALDNVLCARAWSSEHQCDLLVDLAIR------FVEERAYKLLIVDSIMNLFRQDY 223
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + L +L+ + I ++ TNQV +
Sbjct: 224 SGRGELSERQQKLNQFLARLQKLAEEFNIAIVLTNQVQA 262
>gi|218188518|gb|EEC70945.1| hypothetical protein OsI_02540 [Oryza sativa Indica Group]
Length = 349
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS ++IL GGIH +TE+ G G GKTQL +Q+ +++Q+ + G+ +YI
Sbjct: 90 INTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYID 149
Query: 99 TESVFPTARLAQLCE---------------LSPLAKPKCSDKIFITHCYEF--------I 135
TE F R+ Q+ E +P + K + F+ Y F I
Sbjct: 150 TEGSFMVERVYQIAEGCISDILEYFPHCHDKAPAGQEKLKPESFLADIYYFRICSYTEQI 209
Query: 136 DLKRTLESQSGFIENK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKH 194
+ LE G E+K V +++IDS+ FR + D R + L+ L +LS +
Sbjct: 210 AVINYLEKFLG--EHKDVRIVIIDSVTFHFRQDF--DDMALRTRVLSGLSLKLMKLSKAY 265
Query: 195 RIVVICTNQVTSAMTHS 211
+ V+ NQVT+ T
Sbjct: 266 NLAVVLLNQVTTKFTEG 282
>gi|255088451|ref|XP_002506148.1| Rad51 DNA recombinase 2 [Micromonas sp. RCC299]
gi|226521419|gb|ACO67406.1| Rad51 DNA recombinase 2 [Micromonas sp. RCC299]
Length = 440
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 37/186 (19%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLYICTESVF 103
D L GG+ G I+EL G +G GKTQ+CL L+ + P + GV++I TE F
Sbjct: 113 LDDALGGGVPTGSISELVGPAGAGKTQMCLT--LACACAAPKRCGGLESGVVFIDTEQRF 170
Query: 104 PTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLES-------------------- 143
+ RLA+ +A+ K + + H + +R LES
Sbjct: 171 SSQRLAE------IARAKFPETLSPAHAPDAASAERELESLTSRILVLTPSTLSEMLQRL 224
Query: 144 ---QSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ I+ V ++++DS+A + R + + QR + +A L +L+ + +
Sbjct: 225 NGLEEALIDRGVRLLIVDSVAALARAQFGRGQLTQRQELLGQIASALKQLAERLGMAAFV 284
Query: 201 TNQVTS 206
TNQVT+
Sbjct: 285 TNQVTT 290
>gi|386875952|ref|ZP_10118100.1| Rad51 [Candidatus Nitrosopumilus salaria BD31]
gi|386806242|gb|EIJ65713.1| Rad51 [Candidatus Nitrosopumilus salaria BD31]
Length = 219
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++STG +K D L GGI AG I ++ G +G GKTQL LQ LS+ VLY+ T
Sbjct: 1 MISTGLQKLDEFLGGGIPAGVIVDIFGGNGTGKTQLLLQ--LSINSINDGGSVLYLDTTG 58
Query: 102 VFPTARLAQL-----CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIV 156
F R+ ++ + L K S IT+ E I +TL+ +N +I+
Sbjct: 59 GFRPERILEIQNKSNLDFDILEKITVSR---ITNTSEQIKSIKTLQ------KNVFSLII 109
Query: 157 IDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS---IKHRIVVICTNQV 204
ID++ +F Y D+ + + + + Y+HELS I ++I +I TN +
Sbjct: 110 IDNVTDLFSYEYKTDESIFEKNTL--FSRYMHELSNFAITNKIPIIVTNMI 158
>gi|242389898|dbj|BAH80458.1| putative DMC1 protein [Lentinula edodes]
Length = 346
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTE--IVVSTGSEKFDSIL 54
M Q+LK+ G E +V K+K+ K +F G D + +V+STGS+ D+IL
Sbjct: 61 MTTRRQLLKIKGMSEAKVEKIKEAANKVLGSSFSTGVEVQDKGKRVLVISTGSKSVDAIL 120
Query: 55 KGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQ 110
GGI + I+E+ G GKTQL M ++ Q+ G V YI TE F R+
Sbjct: 121 GGGIMSQSISEVYGEFRTGKTQLAHTMSVAAQLPPDLGGASGKVAYIDTEGTFRPDRIKA 180
Query: 111 LCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENK-VGMIVIDSIAGI 163
+ + + + I + E I+ E F E+K ++++DSI +
Sbjct: 181 IADRFGVDGNMALENILYARAFNSEHQMELIN-----ECSLRFAEDKDFRLLIVDSIMAL 235
Query: 164 FRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y+ K +R + + L +LS ++ I V+ TNQV S
Sbjct: 236 FRVDYSGRGKLSERQQKLAQMLSKLTKLSEEYNICVLLTNQVQS 279
>gi|241958150|ref|XP_002421794.1| DNA repair protein rad51 homologue, putative [Candida dubliniensis
CD36]
gi|223645139|emb|CAX39736.1| DNA repair protein rad51 homologue, putative [Candida dubliniensis
CD36]
Length = 361
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 117 ICLTTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 176
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L C D + Y L S + E++ ++
Sbjct: 177 IDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEHQLNLLNIASQMMAESRFSLL 236
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SAM 208
++DSI ++R YA + R + L L+ + I VI TNQV S M
Sbjct: 237 IVDSIMSLYRTDYAGRGELSARQTHVARFMRTLQRLADEFGIAVIITNQVVAQVDGMSGM 296
Query: 209 THSDKNIPALG 219
+ D P G
Sbjct: 297 FNPDPKKPIGG 307
>gi|5802566|gb|AAD51713.1|AF174136_1 RAD51 [Trypanosoma brucei]
Length = 373
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 133 IMVTTGSREVDKLLGGGIEVGSITELFGEFRTGKTQLCHTLCVTCQLPLSQGGGEGMALY 192
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P L C+ H + + L++ + E+
Sbjct: 193 IDTEGTFRPERLVAVAERYSLDPEAVLENVACARAYNTDHQQQLL-----LQASATMAEH 247
Query: 151 KVGMIVIDSIAGIFRNTY 168
+V +IV+DS ++R Y
Sbjct: 248 RVAIIVVDSATALYRTDY 265
>gi|119489209|ref|XP_001262856.1| meiotic recombination protein dmc1 [Neosartorya fischeri NRRL 181]
gi|119411014|gb|EAW20959.1| meiotic recombination protein dmc1 [Neosartorya fischeri NRRL 181]
Length = 357
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V K+K+ +K I E + +STGS++FDSIL GG
Sbjct: 81 LLKIKGFSEVKVEKIKE-AIQKCLPAASGFITAMELSHQRKRVVKISTGSKQFDSILGGG 139
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 140 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAE 199
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 200 RFGVDPDSAQENIAYARALNSEHQLELLNTLSRE--FAGGEYRLLIIDSIMNCFRVDYCG 257
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 258 RGELADRQQKLNQFLMRLAHMAEEFNVCVLMTNQVQS 294
>gi|115610811|ref|XP_788683.2| PREDICTED: DNA repair protein RAD51 homolog 1-like
[Strongylocentrotus purpuratus]
Length = 335
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS++ D +L+GGI G ITE+ G GKTQLC M ++ Q+ + G LY
Sbjct: 96 IQVTTGSKELDKLLQGGIETGSITEIFGEFRTGKTQLCHTMAVTCQLPIDNGGGEGKCLY 155
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L+ D + + + L S + E++ ++
Sbjct: 156 IDTEGTFRPERLIAVADRYNLSGSDVLDNVAYARAHNSDHQSQLLLQASAMMAESRYALL 215
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ ++ + V+ TNQV +AM
Sbjct: 216 IVDSATALYRTDYSGRGELASRQMHLGRFLRTLLRLADEYGVAVVITNQVVAQVDGAAMF 275
Query: 210 HSDKNIPALG 219
SD P G
Sbjct: 276 TSDPKKPIGG 285
>gi|71755957|ref|XP_828893.1| RAD51 protein [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834279|gb|EAN79781.1| RAD51 protein [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 373
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 133 IMVTTGSREVDKLLGGGIEVGSITELFGEFRTGKTQLCHTLCVTCQLPLSQGGGEGMALY 192
Query: 97 ICTESVFPTARLAQLCE---LSP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN 150
I TE F RL + E L P L C+ H + + L++ + E+
Sbjct: 193 IDTEGTFRPERLVAVAERYSLDPEAVLENVACARAYNTDHQQQLL-----LQASATMAEH 247
Query: 151 KVGMIVIDSIAGIFRNTY 168
+V +IV+DS ++R Y
Sbjct: 248 RVAIIVVDSATALYRTDY 265
>gi|429963383|gb|ELA42927.1| DNA repair protein RAD51 [Vittaforma corneae ATCC 50505]
Length = 331
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
VSTGS + D +L GGI +G ITE+ G GKTQLC + +S Q+ + G +YI
Sbjct: 93 VSTGSVELDKLLHGGIESGSITEIFGEFRTGKTQLCHTIAVSCQLPVENGGGAGKCIYID 152
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE F + RL + E L + I Y L S + ENK ++++
Sbjct: 153 TEGTFRSERLIPIAERLGLNPDTVLENISYARAYNSDHQNNLLIHASAMMSENKYAVLIV 212
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAMTH 210
DS ++R Y + R + L L+ + + V+ TNQV T+AM +
Sbjct: 213 DSATALYRTDYNGRGELGARQIHLARFLRTLTNLAETYGVAVVITNQVVATVDGTTAMFN 272
Query: 211 SDKNIPALG 219
+D P G
Sbjct: 273 ADPKKPIGG 281
>gi|399949905|gb|AFP65561.1| DNA repair protein Rad51 [Chroomonas mesostigmatica CCMP1168]
Length = 331
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS D IL GGI G ITEL G GKTQLC + +S Q+S G LYI
Sbjct: 94 LTTGSRNLDKILGGGIETGSITELFGEFRTGKTQLCHNISVSCQLSFEQGGGEGRALYID 153
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE F R+ + E L D I Y D + L +Q+ + E + +++
Sbjct: 154 TEGTFRPERIVSIAERFKLNGQDVLDNIAFARAYN-TDHQMELLNQACAMMAERRYAVVI 212
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNI 215
+DS ++R Y + R + L L + + + TNQV +++ S+ I
Sbjct: 213 VDSATALYRTDYIGRGELAPRQQHLAKFLRILQRLCDEFGVAALITNQVIASVDGSNSFI 272
>gi|327294681|ref|XP_003232036.1| hypothetical protein TERG_07653 [Trichophyton rubrum CBS 118892]
gi|326465981|gb|EGD91434.1| hypothetical protein TERG_07653 [Trichophyton rubrum CBS 118892]
Length = 601
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST DS L GGI G +TE++G SG GKTQ L + LS+Q+ PH K LY+ T
Sbjct: 120 ISTLDPILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPHGLSKNALYMST 179
Query: 100 ESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKV 152
ES T RL+QL L P D I+ + LESQ I ++
Sbjct: 180 ESDLATNRLSQLINEHRTLQALHPETPRPSLDNIYSVTTVD-------LESQEHIINYQI 232
Query: 153 GMIVI---------DSIAGIFRNTYAEDK---YVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ ++ DSI +R + ++ ++R+ ++ L H+L L++ H I V+
Sbjct: 233 PVAILRYNIGIIIIDSITANYRAESSTERVSGLLERSGQLKKLGHFLRTLAVTHNIAVVV 292
Query: 201 TNQVTSAMTHS 211
NQ++ S
Sbjct: 293 ANQISDGFESS 303
>gi|326469904|gb|EGD93913.1| hypothetical protein TESG_01443 [Trichophyton tonsurans CBS 112818]
Length = 612
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST DS L GGI G +TE++G SG GKTQ L + LS+Q+ PH K LYI T
Sbjct: 120 ISTLDPILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPHGLSKNALYIST 179
Query: 100 ESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKV 152
ES T RL+QL L P D I+ + LESQ I ++
Sbjct: 180 ESDLATNRLSQLINEHRTLQALHPETPRPSLDNIYSVTTVD-------LESQEHIINYQI 232
Query: 153 GMIV---------IDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ + IDSI +R +T + ++R+ ++ L H+L L++ H I V+
Sbjct: 233 PVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAVTHNIAVVV 292
Query: 201 TNQVTSAMTHS 211
NQ++ S
Sbjct: 293 ANQISDGFESS 303
>gi|121709155|ref|XP_001272325.1| meiotic recombination protein dmc1 [Aspergillus clavatus NRRL 1]
gi|119400474|gb|EAW10899.1| meiotic recombination protein dmc1 [Aspergillus clavatus NRRL 1]
Length = 337
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE--------IVVSTGSEKFDSILKGG 57
+LK+ GF E +V K+K+ +K I E + +STGS++FDSIL GG
Sbjct: 54 LLKIKGFSEVKVEKIKE-AIQKCLPAAAGFITAMELSHQRKRVVKISTGSKQFDSILGGG 112
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 113 FQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAE 172
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-A 169
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 173 RFGVDSDSAQENIAYARALNSEHQLELLNTLSRE--FAGGEYRLLIIDSIMNCFRVDYCG 230
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + I V+ TNQV S
Sbjct: 231 RGELADRQQKLNQFLMKLAHMAEEFNICVLMTNQVQS 267
>gi|296005023|ref|XP_001349356.2| meiotic recombination protein dmc1-like protein [Plasmodium
falciparum 3D7]
gi|13876949|gb|AAK43698.1|AF356553_1 meiotic recombination protein DMC1-like protein [Plasmodium
falciparum]
gi|225632246|emb|CAD51205.2| meiotic recombination protein dmc1-like protein [Plasmodium
falciparum 3D7]
Length = 347
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS FD L GGI + ITEL G + CGKTQ+C + ++ Q+ + G V YI
Sbjct: 110 ITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVI 157
TE F ++ ++ E L D I + L + L S + E ++V+
Sbjct: 170 TEGTFRPEKVCKIAERYGLDGEAVLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVV 229
Query: 158 DSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI +FR ++ + +R + L +LS + I ++ TNQV S
Sbjct: 230 DSIISLFRVDFSGRGELSERQQKLNKTMSILSKLSEQFNIAILITNQVMS 279
>gi|410076230|ref|XP_003955697.1| hypothetical protein KAFR_0B02650 [Kazachstania africana CBS 2517]
gi|372462280|emb|CCF56562.1| hypothetical protein KAFR_0B02650 [Kazachstania africana CBS 2517]
Length = 335
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ K F D+ + +STGS++ DSIL GGI ITE
Sbjct: 60 GLSEVKVEKIKEAASKIISVGFISATVQFDIRQKIFALSTGSKQLDSILGGGIMTMSITE 119
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G CGKTQ+ +C++ Q+ + G V Y+ TE F R+ Q+ E L
Sbjct: 120 VFGEFRCGKTQMSHTLCVTAQLPKELGGGEGKVAYVDTEGTFRPERIKQIAERYDLDPEA 179
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
C D + +E G + + +I+IDSI FR Y + +R
Sbjct: 180 CLDNVTYARALNSEHQMELVEQLGGELSSGDYRLIIIDSIMANFRVDYCGRGELNERQQK 239
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L+ L+ + + + TNQV S
Sbjct: 240 LNQHLFKLNRLAEEFNVAIFMTNQVQS 266
>gi|403374245|gb|EJY87063.1| Rad51 [Oxytricha trifallax]
Length = 352
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS+ D++L GG+ G ITE+ G GKTQ+C +C++ Q+ G +Y
Sbjct: 113 VFLSTGSKGLDTLLGGGMETGSITEIFGEFRTGKTQICHTLCVTCQLPVSQGGGAGMAMY 172
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + K D + + + L + + E++ ++
Sbjct: 173 IDTEGTFRPERLIPIAKRYGLDEQKVLDNVAYARAHNTDQQNKLLMQAAALMCESRFALL 232
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV ++M
Sbjct: 233 IVDSATALYRTDYSGRGELSARQMSLAKFLRQLQRLADEFGVAVVITNQVVAQVDGASMF 292
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 293 AADSKKPIGG 302
>gi|14595977|gb|AAK68858.1| DNA repair protein [Nosema bombycis]
Length = 333
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 16/177 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VL 95
+ +STGS + D +L GGI +G ITE+ G GKTQ+C + ++ Q+ P +G L
Sbjct: 93 VYLSTGSSELDKLLNGGIESGSITEIFGEFRTGKTQICHTVAVTCQLP-PEQGGANGKAL 151
Query: 96 YICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGM 154
YI TE F + R + E L + D I Y + L ++ S +NK +
Sbjct: 152 YIDTEGTFRSERFFPIAERYGLDPTEVLDNISYARAYNSDHQSQLLIQASSLMSQNKYAV 211
Query: 155 IVIDSIAGIFRNTYAED-----KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++IDS ++R ++ + + A +RDL + ++ + VI TNQV S
Sbjct: 212 LIIDSATALYRTDFSGRGELGARQISLARYLRDLVN----IAETFHVAVIITNQVVS 264
>gi|260944444|ref|XP_002616520.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850169|gb|EEQ39633.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 339
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 18/194 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 94 ICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLESQSGFIENKV 152
I TE F RL + + L C D + Y +F L + + S E++
Sbjct: 154 IDTEGTFRPVRLVSIAQRYGLNPDDCLDNVAYARAYNAEHQFQLLHQAAQMMS---ESRF 210
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------T 205
++++DSI ++R Y+ + R + L L+ + I V+ TNQV +
Sbjct: 211 SLLIVDSIMSLYRTDYSGRGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGS 270
Query: 206 SAMTHSDKNIPALG 219
+AM + D P G
Sbjct: 271 AAMFNPDPKKPIGG 284
>gi|225446054|ref|XP_002268968.1| PREDICTED: DNA repair protein XRCC3 homolog [Vitis vinifera]
Length = 300
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 58/265 (21%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+NP+ +T + G D L GG+ ITEL SG GKTQLCLQ+ LS Q+
Sbjct: 8 QNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLG 67
Query: 93 GV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFID--LKRTLESQSG 146
G+ LYI +E FP+ RL QL + + S + Y +D L R ++S
Sbjct: 68 GLAASSLYIHSEFPFPSRRLQQLSQ-----SFRSSYSHVLDSEYNPLDFVLVRGVQSADQ 122
Query: 147 FIEN---------------KVGMIVIDSIAGIFRNTYAEDKY--VQRAHDMRDLAHYLHE 189
+ V +IVIDSIA +FR + + +R+ ++ L
Sbjct: 123 LFDVLLKMDSVLLRPPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKA 182
Query: 190 LSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICT 249
L+ + + V+ TNQV + + GL R ++ L W
Sbjct: 183 LAERFGLAVVVTNQVVDFVGQAG------GLNGLRVGNLGSL-----------W------ 219
Query: 250 NQVTSAMTHSDKNIPALGLSWSNLI 274
+ + ALGLSW+N +
Sbjct: 220 -------SSGRRVCAALGLSWANCV 237
>gi|226292806|gb|EEH48226.1| meiotic recombination protein DMC1 [Paracoccidioides brasiliensis
Pb18]
Length = 632
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 22 LLKIKGFSEVKVEKIKEAVQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDSILAG 79
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 80 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 139
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F ++ +++IDSI FR Y
Sbjct: 140 ERFGVDPDSALENIAYARALNSEHQLELLNTLSKE--FAGSEYRLLIIDSIMNCFRVDYC 197
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 198 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 235
>gi|442535544|gb|AGC52845.1| Rad51, partial [Hypsibius dujardini]
Length = 377
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I + TGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 130 IQIVTGSKELDKLLQGGIETGSITEMFGEFRSGKTQLCHTLAVTCQLPIDMGGGEGKCLY 189
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L D + Y ++ +++ + +E++ ++
Sbjct: 190 IDTEGTFRPERLLSIAERYGLNGNDVLDNVAYARAYNTDHQMQLLVQAAAMMVESRFALL 249
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS---AMTHS 211
++DS ++R Y+ + R + +L L+ + + V+ TNQV + AM +
Sbjct: 250 IVDSATALYRTDYSGRGELCARQMHLARFLRFLMRLADEFGVAVLITNQVVATVDAMAFA 309
Query: 212 DKNIPALG 219
+ P G
Sbjct: 310 ETKKPIGG 317
>gi|403264489|ref|XP_003924513.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 350
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V+K K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSKACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH- 130
Q C+ M + + G V+YI TES F RL ++ E +K+ +T
Sbjct: 116 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSS 175
Query: 131 ---------CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAH 178
C E + +LE + I + +++IDS+A + R +T +R
Sbjct: 176 KVHLYRELTCDEVLQRIESLEEE--IISKGIKLVIIDSVASVVRKEFDTQLPGNLKERNK 233
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ A L L+ + I VI TNQ+T+
Sbjct: 234 FLAREASSLKYLAEEFSIPVILTNQITT 261
>gi|344285345|ref|XP_003414422.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Loxodonta
africana]
Length = 445
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 36/227 (15%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 160 TQGFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 219
Query: 95 LYICTESVFPTAR---LAQLC------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R LA C L I+ C +
Sbjct: 220 VFIDTEGSFMIDRVVDLATACIQHLHLITGTHMEEEHQKALEDFTLENILSHIYYFRCRD 279
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 280 CTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 337
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + DKN IPALG ++ A +R + H+
Sbjct: 338 NNHRLAVILTNQMTTKI---DKNQASLIPALGESWGHAATIRIIFHW 381
>gi|332228955|ref|XP_003263652.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 4 [Nomascus
leucogenys]
Length = 401
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHK 92
D + +ST D L GG+ G +TE++G GCGKTQ C+ M L +
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 93 GVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQ 144
V+YI TES F RL ++ E +K+ +T H Y + L+R +
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
I + ++++DS+A + R +T + +R + A L L+ + I VI T
Sbjct: 197 EEIISKGIKLVILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVILT 256
Query: 202 NQVTSAMT 209
NQ+T+ ++
Sbjct: 257 NQITTHLS 264
>gi|403264491|ref|XP_003924514.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 350
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V+K K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSKACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH- 130
Q C+ M + + G V+YI TES F RL ++ E +K+ +T
Sbjct: 116 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSS 175
Query: 131 ---------CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAH 178
C E + +LE + I + +++IDS+A + R +T +R
Sbjct: 176 KVHLYRELTCDEVLQRIESLEEE--IISKGIKLVIIDSVASVVRKEFDTQLPGNLKERNK 233
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ A L L+ + I VI TNQ+T+
Sbjct: 234 FLAREASSLKYLAEEFSIPVILTNQITT 261
>gi|255086169|ref|XP_002509051.1| DMC1 DNA recombinase [Micromonas sp. RCC299]
gi|226524329|gb|ACO70309.1| DMC1 DNA recombinase [Micromonas sp. RCC299]
Length = 359
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I + TG++ D+IL GG+ ITE+ G CGKTQ+C + ++ Q+ G V +
Sbjct: 120 INIRTGADTIDAILGGGVPTRSITEMYGEWRCGKTQICHTLAVTTQLPLDEGGGCAKVAF 179
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFI--THCYEFIDLKRTLESQSGFIENKVGM 154
I TE F R+ Q+ E L D I + T +E +D TL + F E +
Sbjct: 180 IDTEGTFRAERIVQIAERFNLDSDAVLDNILVARTFTHEMMDNALTLLAGK-FSEEPFKI 238
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++IDSI FR + + +R + L++++ + I V+ TNQV +
Sbjct: 239 LIIDSIMAHFRVDFIGRGELSERQQRLGQFLAKLNKIADEFNIAVVYTNQVQA 291
>gi|149737201|ref|XP_001500140.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Equus caballus]
Length = 350
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVSQPHKGVLYICTESVFPT 105
D L GG+ G +TE++G GCGKTQ C+ M L + + V+YI TE+ F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYIDTEAAFSA 149
Query: 106 ARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIENKVGMIVI 157
RL ++ E + DK+ +T H Y + L+R + I V +++I
Sbjct: 150 ERLVEIAESRFPSYFNNEDKLLLTSSNVHLYRELSCDEVLQRVESLEEEIISKGVKLVII 209
Query: 158 DSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 210 DSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITT 261
>gi|349577075|dbj|GAA22244.1| K7_Rad57p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 460
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDEVLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 220
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++IDSI+ FR + Y+ R A ++ LAH + + V+ NQ
Sbjct: 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQ 273
Query: 204 V 204
V
Sbjct: 274 V 274
>gi|326479127|gb|EGE03137.1| DNA repair protein [Trichophyton equinum CBS 127.97]
Length = 604
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 90/191 (47%), Gaps = 29/191 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST DS L GGI G +TE++G SG GKTQ L + LS+Q+ PH K LYI T
Sbjct: 120 ISTLDPILDSALSGGISTGYLTEVTGESGAGKTQFLLHLLLSVQLPAPHGLSKNALYIST 179
Query: 100 ESVFPTARLAQLCE-------LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKV 152
ES T RL+QL L P D I+ + LESQ I ++
Sbjct: 180 ESDLATNRLSQLINEHRTLQALHPETPRPSLDNIYSVTTVD-------LESQEHIINYQI 232
Query: 153 GMIV---------IDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ + IDSI +R +T + ++R+ ++ L H+L L++ H I V+
Sbjct: 233 PVAISRYNIGIIIIDSITANYRAESSTESVSGLLERSGQLKKLGHFLRTLAVTHNIAVVV 292
Query: 201 TNQVTSAMTHS 211
NQ++ S
Sbjct: 293 ANQISDGFESS 303
>gi|366998431|ref|XP_003683952.1| hypothetical protein TPHA_0A04450 [Tetrapisispora phaffii CBS 4417]
gi|357522247|emb|CCE61518.1| hypothetical protein TPHA_0A04450 [Tetrapisispora phaffii CBS 4417]
Length = 466
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 24/194 (12%)
Query: 35 PIDMTE----IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP 90
P+ +TE + +TG + D++L GGI+ GITE+ G S GK+Q + + LS+Q+
Sbjct: 75 PVLLTELSKPVSFTTGDVEIDNLLGGGIYTHGITEIFGESSTGKSQFLMLLSLSVQLPLS 134
Query: 91 HKGV----LYICTESVFPTARLAQLCELSPLAKPKCSD------KIFITHCYEFIDLKRT 140
G+ +YI TE PT RL ++ ++P+ S+ IF C + + +
Sbjct: 135 LGGLNGKSVYITTEGDLPTERLKEII----TSRPEFSNNNVSQSNIFTVGCNDLMTQEHI 190
Query: 141 LESQSGFI--ENK-VGMIVIDSIAGIFRNTYAEDKYVQ---RAHDMRDLAHYLHELSIKH 194
++ Q + +NK + +++IDSI+ R + + H + +LA +L L+ K+
Sbjct: 191 IKVQLPVLLEQNKDINLLIIDSISHHMRVELQSSSFKESHANRHYINELAEHLLFLAKKY 250
Query: 195 RIVVICTNQVTSAM 208
+ ++ NQV+ +
Sbjct: 251 SVAIVVANQVSDKI 264
>gi|146302794|ref|YP_001190110.1| DNA repair and recombination protein RadA [Metallosphaera sedula
DSM 5348]
gi|226736609|sp|A4YCN4.1|RADA_METS5 RecName: Full=DNA repair and recombination protein RadA
gi|145701044|gb|ABP94186.1| DNA repair and recombination protein RadA [Metallosphaera sedula
DSM 5348]
Length = 324
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A ++ + + +I +TGS+ D +L GGI +TEL G G GKT
Sbjct: 64 EARDALDIRFKTALEIEQERASVKKI--TTGSQALDGLLGGGIETRTMTELFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKG-----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH 130
Q+C Q+ +++Q+ P +G LYI TE F T R+ + L + I
Sbjct: 122 QICHQVSVNVQLP-PERGGLSGKALYIDTEGTFRTERIKAMASALGLEPKEVLQNIMSIR 180
Query: 131 CYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYL 187
+E I +N + ++V+DSI FR Y+ + R + H L
Sbjct: 181 AINTDHQIAIVEELQDIIAKDNSIKLVVVDSITSHFRAEYSGRENLAVRQQKLNRHLHQL 240
Query: 188 HELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
L+ + + VI TNQV + M + D + G T
Sbjct: 241 VRLAEIYDLAVIVTNQVMARPDMFYGDPTVAVGGHT 276
>gi|149051555|gb|EDM03728.1| similar to RAD51-like 1 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 319
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKG 93
++ +ST D L GG+ G +TE++G GCGKTQ C+ M L ++
Sbjct: 78 LSPAFLSTTLGALDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGA 137
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-----CYEFI--DLKRTLES-QS 145
VLYI TES F RL ++ E +K+ +T C E L + LES +
Sbjct: 138 VLYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEE 197
Query: 146 GFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I V ++++DSIA + R + + +R + A L LS + + VI TN
Sbjct: 198 EIISKGVKLVIVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKYLSGEFSVPVILTN 257
Query: 203 QVTSAMTHSDKNIPALGLTYERAHDM 228
Q+T TH +P+ A D+
Sbjct: 258 QIT---THLSGALPSQADLVSPADDL 280
>gi|68076139|ref|XP_679989.1| meiotic recombination protein dmc1-like protein, [Plasmodium
berghei strain ANKA]
gi|56500849|emb|CAH94824.1| meiotic recombination protein dmc1-like protein, putative
[Plasmodium berghei]
Length = 345
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 11 GFQEWEVNKVKDLKKK----KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V+K+ ++ K AF G + V ++TGS D L GG + IT
Sbjct: 70 GISEVKVDKILEVASKIENCSAFITGNQLVQKRSKVLKITTGSSVLDKTLGGGFESMSIT 129
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
EL G + CGKTQ+C + ++ Q+ + +G V YI TE F ++ ++ + L
Sbjct: 130 ELFGENRCGKTQVCHTLAVTAQLPKNMQGGNGKVCYIDTEGTFRPEKICKIAQRFGLNSE 189
Query: 121 KCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D I + L + L S + E ++V+DSI +FR ++ +R
Sbjct: 190 DVLDNILYARAFTHEHLYQLLATSAAKMCEEPFALLVVDSIISLFRVDFSGRGNLSERQQ 249
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + L +L + I ++ TNQV S
Sbjct: 250 KLNKIMSVLSKLGEQFNIAIVITNQVMS 277
>gi|225562590|gb|EEH10869.1| meiotic recombination protein dmc1 [Ajellomyces capsulatus G186AR]
Length = 381
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 28/225 (12%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 76 LLKIRGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDSILAG 133
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 134 GFQSMSISEVYGEFRCGKTQLSHTMSVMAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 193
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA 169
E + + I ++L TL + F+ + +++IDSI FR Y
Sbjct: 194 ERFGVDPDSALENIAYARALNSEHQLELLNTLSKE--FVGGEYRLLIIDSIMNCFRVDYC 251
Query: 170 -----EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
D+ + + LAH E ++ ++++CT++ ++T
Sbjct: 252 GRGELADRQQKLNQFLMKLAHMAEEFNVC--VLMVCTSKNRESLT 294
>gi|395819764|ref|XP_003783249.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Otolemur garnettii]
Length = 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V +STGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHISTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGARGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|383863607|ref|XP_003707271.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Megachile
rotundata]
Length = 341
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ V+TGS + D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 101 VFVTTGSSELDRLLGGGIETGSITEIFGEFRSGKTQLCHTLAVNCQLPIDMGGAEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E +A D + Y K +++ + E++ ++
Sbjct: 161 IDTEGTFRPERLIAVAERYKIAGDSVLDNVACARAYNTDHQTKLLIQASAMMTESRYALL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS ++R Y+ + R + L ++ +H + V+ TNQV ++M
Sbjct: 221 IVDSATSLYRTDYSGRGELSARQTHLARFLRMLLRIADEHGVAVVITNQVVAQVDGAASM 280
Query: 209 THSDKNIPALG 219
D+ P G
Sbjct: 281 FGGDQKKPIGG 291
>gi|15920489|ref|NP_376158.1| DNA repair and recombination protein RadA [Sulfolobus tokodaii str.
7]
gi|20139589|sp|Q975Y1.1|RADA_SULTO RecName: Full=DNA repair and recombination protein RadA
gi|15621272|dbj|BAB65267.1| DNA repair and recombination protein RadA [Sulfolobus tokodaii str.
7]
Length = 324
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E + D++ K A +V K I+ +I +TGS+ D +L GGI +TEL G G GKT
Sbjct: 64 EAREALDIRFKTALEVKKERINTKKI--TTGSQALDGLLGGGIETRTMTELFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT-- 129
QLC Q+ +++Q+ G+ +YI TE F R+ + + L + I+
Sbjct: 122 QLCHQLSVNVQLPLEKGGLGGKAVYIDTEGTFRWERIEAMSKAIGLEPDSAMNNIYYMRA 181
Query: 130 ----HCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLA 184
H +D + L S+ I+ ++++DS+ FR + + R +
Sbjct: 182 INSDHQMAIVDDLQELISKDPAIK----LVIVDSVTSHFRAEFPGRENLAVRQQKLNKHL 237
Query: 185 HYLHELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
H L L+ + + VI TNQV + M + D + G T
Sbjct: 238 HQLVRLAEMYDLAVIITNQVMARPDMFYGDPTVAVGGHT 276
>gi|403356083|gb|EJY77631.1| hypothetical protein OXYTRI_00735 [Oxytricha trifallax]
Length = 256
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS+ D++L GG+ G ITE+ G GKTQ+C +C++ Q+ G +Y
Sbjct: 17 VFLSTGSKGLDTLLGGGMETGSITEIFGEFRTGKTQICHTLCVTCQLPVSQGGGAGMAMY 76
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + + L + K D + + D + L Q+ + E++ +
Sbjct: 77 IDTEGTFRPERLIPIAKRYGLDEQKVLDNVAYARAHN-TDQQNKLLMQAAALMCESRFAL 135
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAM 208
+++DS ++R Y+ + R + L L+ + + V+ TNQV ++M
Sbjct: 136 LIVDSATALYRTDYSGRGELSARQMSLAKFLRQLQRLADEFGVAVVITNQVVAQVDGASM 195
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 196 FAADSKKPIGG 206
>gi|213515370|ref|NP_001134027.1| DNA repair protein RAD51 homolog A [Salmo salar]
gi|209156210|gb|ACI34337.1| DNA repair protein RAD51 homolog A [Salmo salar]
Length = 338
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 99 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + + L S + E++ ++
Sbjct: 159 IDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 218
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 219 IVDSATALYRTDYSGRGELAARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 278
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 279 SADPKKPIGG 288
>gi|359417899|ref|ZP_09209946.1| DNA repair and recombination protein RadB [Candidatus Haloredivivus
sp. G17]
gi|358031752|gb|EHK00609.1| DNA repair and recombination protein RadB [Candidatus Haloredivivus
sp. G17]
Length = 227
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
V TGS+ D L+GGI G IT + G SG GKT C+Q ++ +V+Q V YI TE
Sbjct: 6 VDTGSDLIDDFLQGGIEKGIITNVYGESGTGKTAFCIQ--VAAEVAQNGGKVAYIDTEGG 63
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVIDSIA 161
F R+ Q+ + L + + I + +F + T++ +E + + ++++DS
Sbjct: 64 FSPERMKQMADEDAL------ENLVIKNPVDFKGQEETIDELEALVEKEGIDLVIVDSAV 117
Query: 162 GIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
++R D + + L +++ I V+ TNQV ++ D
Sbjct: 118 SLYRLKVNGDNASEINQRLSQQLSELSKIARTQNIPVMITNQVYTSFDEED 168
>gi|62858453|ref|NP_001016393.1| RAD51 homolog [Xenopus (Silurana) tropicalis]
gi|134254224|gb|AAI35426.1| hypothetical protein LOC549147 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 97 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 157 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 216
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 217 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 276
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 277 AADPKKPIGG 286
>gi|296215342|ref|XP_002754085.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Callithrix jacchus]
Length = 350
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH----------CYEFIDLKRTLE 142
V+YI TES F RL ++ E +K+ +T C E + +LE
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 143 SQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ I V +++IDS+A + R +T +R + A L L+ + I VI
Sbjct: 197 EE--IISKGVKLVIIDSVASVVRKEFDTQLPGNLKERNKFLAREASSLKYLAEEFSIPVI 254
Query: 200 CTNQVTSAMT 209
TNQ+T+ ++
Sbjct: 255 LTNQITTHLS 264
>gi|147777505|emb|CAN60498.1| hypothetical protein VITISV_027869 [Vitis vinifera]
Length = 2077
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+NP+ +T + G D L GG+ ITEL SG GKTQLCLQ+ LS Q+
Sbjct: 1785 QNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSAQLPTSLG 1844
Query: 93 GV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
G+ LYI +E FP+ RL QL + + D + + +F+ L R ++S
Sbjct: 1845 GLAASSLYIHSEFPFPSRRLQQLSQSFRSSYSHVLDSEY--NPLDFV-LVRGVQSADQLF 1901
Query: 149 EN---------------KVGMIVIDSIAGIFRNTYAEDKY--VQRAHDMRDLAHYLHELS 191
+ V +IVIDSIA +FR + + +R+ ++ L L+
Sbjct: 1902 DVLLKMDSVLLRPPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKLKALA 1961
Query: 192 IKHRIVVICTNQV 204
+ + V+ TNQV
Sbjct: 1962 ERFGLAVVVTNQV 1974
>gi|409082637|gb|EKM82995.1| hypothetical protein AGABI1DRAFT_125473 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 475
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 29 FQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
FQ ++P + +S G D L GG+ G I E+ G S GKTQ LQ+ L +Q+
Sbjct: 68 FQTLEDPNNGGTEHLSLGDPVLDDTLSGGLRTGMIWEIVGESAAGKTQFALQLSLHVQLH 127
Query: 89 QPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQ 144
G+ Y+ T + T+RL Q+ ++ L+ D I+ + L +
Sbjct: 128 SSQGGLGGAACYLTTSTKLQTSRLLQIKQMRNLSDASLEDVHTISTPTVHVLLNVLDKQL 187
Query: 145 SGFIEN--------KVGMIVIDSIAGIFR--NTYAEDKYVQRAHDMRDLAHYLHELSIKH 194
FIE V ++VID++A +F N V+R+ + ++ LH+L +H
Sbjct: 188 PTFIETISQTVARKPVKLVVIDALAELFHVANKVTTASLVERSQQLTRISALLHQLVQRH 247
Query: 195 RIVVICTNQVTSAMTHSDKNIPALG 219
IV + N+V A D N P G
Sbjct: 248 NIVTVVLNEVLDAF---DYNTPDSG 269
>gi|261199103|ref|XP_002625953.1| meiotic recombinase Dmc1 [Ajellomyces dermatitidis SLH14081]
gi|239595105|gb|EEQ77686.1| meiotic recombinase Dmc1 [Ajellomyces dermatitidis SLH14081]
Length = 337
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + I STGS++FDSIL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVRI--STGSKQFDSILAG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENIAYARALNSEHQLELLNTLAKE--FAGGEYRLLIIDSIMNCFRVDYC 229
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|58262116|ref|XP_568468.1| meiotic recombination-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57230641|gb|AAW46951.1| meiotic recombination-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 323
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 26/216 (12%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVV--STGSEKFDSILKGGIHAGGI 63
+LK+ G E +V K+K AF G D VV +TGS+ D++L GGI I
Sbjct: 50 LLKIKGLSEAKVEKLK----PPAFLTGTEIADRRANVVYITTGSKSVDAMLGGGIATQSI 105
Query: 64 TELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAK 119
TE+ G GKTQLC +C+S Q+ + G V YI TE F R+ + + +
Sbjct: 106 TEVFGEYRTGKTQLCHTLCVSTQLPEDQGGGSGKVAYIDTEGTFRPDRVRAVADRFGVDS 165
Query: 120 PKCSDKIFIT-------HCYEFIDLKRTLESQSGFIENKV-GMIVIDSIAGIFRNTYA-E 170
D + C +DL F+E + ++++DSI +FR Y+
Sbjct: 166 NMALDNVLCARAWSSEHQCDLLVDLAIR------FVEERAYKLLIVDSIMNLFRQDYSGR 219
Query: 171 DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L +L+ + I ++ TNQV +
Sbjct: 220 GELSERQQKLNQFLARLQKLAEEFNIAIVLTNQVQA 255
>gi|444323171|ref|XP_004182226.1| hypothetical protein TBLA_0I00440 [Tetrapisispora blattae CBS 6284]
gi|387515273|emb|CCH62707.1| hypothetical protein TBLA_0I00440 [Tetrapisispora blattae CBS 6284]
Length = 478
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 236 ICLTTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDSGGGEGKCLY 295
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + + Y R L++ + + E++ ++
Sbjct: 296 IDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFALV 355
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ ++R +A + R + L L+ + + V+ TNQV +
Sbjct: 356 IVDSVMALYRTDFAGRGELSARQMHLARFMRALQRLADQFGVAVVITNQVVA 407
>gi|239609785|gb|EEQ86772.1| meiotic recombinase Dmc1 [Ajellomyces dermatitidis ER-3]
Length = 337
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + I STGS++FDSIL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVRI--STGSKQFDSILAG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENIAYARALNSEHQLELLNTLAKE--FAGGEYRLLIIDSIMNCFRVDYC 229
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|317155982|ref|XP_001825494.2| meiotic recombination protein DMC1 [Aspergillus oryzae RIB40]
Length = 337
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 7 MLKL-GFQEWEVNKVKD-----LKKKKAFQVGKNPIDMTEIVV--STGSEKFDSILKGGI 58
+LK+ GF E +V K+KD L F + VV STGS++FD+IL GG
Sbjct: 54 LLKIRGFSEVKVEKIKDAINKCLPSASGFITAMELSHQRKRVVRISTGSKQFDAILGGGF 113
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 114 QSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAER 173
Query: 115 SPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AE 170
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 174 FGVDADSARENIAYARALNSEHQLELLNTLSKE--FTGGEYRLLIIDSIMNCFRVDYCGR 231
Query: 171 DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 232 GELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|449480344|ref|XP_002196350.2| PREDICTED: DNA repair protein RAD51 homolog 3 [Taeniopygia guttata]
Length = 521
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 30/213 (14%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + G+ ++I TE F
Sbjct: 251 LDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGIAGEAVFIDTEGSFMV 310
Query: 106 ARL-------AQLCELSPLAKPKCSDK--------------IFITHCYEFIDLKRTLESQ 144
R+ Q C L A+ + + I+ C ++ +L +
Sbjct: 311 DRVVDIAAACVQHCHLIAEAQQEEDHQKALETFSLENILSHIYYFRCRDYTELLAQVYLL 370
Query: 145 SGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
F+ +KV ++VID IA FR+ + ED + R + LA L ++ HR V+ TN
Sbjct: 371 PEFLSEHSKVRLVVIDGIAFPFRHDF-EDLSL-RTRLLNGLAQQLIIIANDHRAAVVLTN 428
Query: 203 QVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
Q+T+ + S +PALG ++ A +R + H+
Sbjct: 429 QMTTRIGQSQSTLVPALGESWGHAATVRLIFHW 461
>gi|323355789|gb|EGA87603.1| Rad57p [Saccharomyces cerevisiae VL3]
Length = 253
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI TE PT
Sbjct: 1 MDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLPT 60
Query: 106 ARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVGMIVIDS 159
RL + P + IF C + I+ + + Q + + + +++IDS
Sbjct: 61 QRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIKLVIIDS 120
Query: 160 IA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ FR + Y+ R A ++ LAH + + V+ NQV
Sbjct: 121 ISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQV 168
>gi|212224798|ref|YP_002308034.1| DNA repair and recombination protein RadA [Thermococcus onnurineus
NA1]
gi|212009755|gb|ACJ17137.1| radA DNA repair protein rad51 [Thermococcus onnurineus NA1]
Length = 353
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
+STGS+ D ++ GGI ITE+ G G GKTQL + + +Q+ P +G V++I
Sbjct: 117 ISTGSKSLDKLVGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLP-PEEGGLQGSVIWI 175
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLE--SQSGFIENK 151
TE+ F R+ Q+ E L + I++ + + + ++R E + E
Sbjct: 176 DTENTFRPERIRQIAENRGLDPEEVLKNIYVARAFNSNHQMLLVERAEEIIKEKAETERP 235
Query: 152 VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V +IVIDS+ FR+ Y +R + LH ++ + I V TNQV +
Sbjct: 236 VKLIVIDSLMAHFRSEYVGRGTLAERQQKLAKHLADLHRIADLYDIAVFVTNQVQA 291
>gi|193603671|ref|XP_001948893.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Acyrthosiphon
pisum]
Length = 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 101 IQLTTGSKELDRLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIGQNGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + E L D I Y D + L Q+G + E++ +
Sbjct: 161 IDTEGTFRPERLLSVAERYQLVGSDVLDNIACARAYN-TDHQTQLLLQAGAMMAESRYAL 219
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAM 208
+++DS ++R Y+ + R + + L L+ + + V+ TNQV ++M
Sbjct: 220 LIVDSAMALYRTDYSGRGELSARQNHLARFLRMLLRLADEFGVAVVITNQVVAQVDGASM 279
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 280 FAADPKKPVGG 290
>gi|6320207|ref|NP_010287.1| Rad57p [Saccharomyces cerevisiae S288c]
gi|131784|sp|P25301.1|RAD57_YEAST RecName: Full=DNA repair protein RAD57
gi|172345|gb|AAA34950.1| DNA repair protein [Saccharomyces cerevisiae]
gi|642809|emb|CAA88064.1| Rad57p [Saccharomyces cerevisiae]
gi|285811028|tpg|DAA11852.1| TPA: Rad57p [Saccharomyces cerevisiae S288c]
gi|392300119|gb|EIW11210.1| Rad57p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 460
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 220
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++IDSI+ FR + Y+ R A ++ LAH + + V+ NQ
Sbjct: 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQ 273
Query: 204 V 204
V
Sbjct: 274 V 274
>gi|302698277|ref|XP_003038817.1| RecA family ATPase [Schizophyllum commune H4-8]
gi|300112514|gb|EFJ03915.1| RecA family ATPase, partial [Schizophyllum commune H4-8]
Length = 348
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSIL 54
M Q+LK+ G E +V K+K+ K +F G D + V +STGS+ D IL
Sbjct: 63 MTTRRQLLKIKGMSEAKVEKIKEAAHKILGSSFATGVEIQDKRKRVNTISTGSKAVDGIL 122
Query: 55 KGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQ 110
GGI + I+E+ G GKTQL M + Q+ G V YI TE F R+
Sbjct: 123 GGGIMSQSISEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASGKVAYIDTEGTFRPDRIKS 182
Query: 111 LCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENK-VGMIVIDSIAGI 163
+ E + + I + E I+ E S F E+K ++++DSI +
Sbjct: 183 IAERFGVDGSMALENILYARAFNSEHQMELIN-----ECSSRFAEDKDFRLLIVDSIMAL 237
Query: 164 FRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y+ + +R + + L +LS ++ I ++ TNQV S
Sbjct: 238 FRVDYSGRGELSERQQKLAQMLSKLTKLSEEYNIAILLTNQVQS 281
>gi|190405016|gb|EDV08283.1| DNA repair protein RAD57 [Saccharomyces cerevisiae RM11-1a]
gi|259145249|emb|CAY78513.1| Rad57p [Saccharomyces cerevisiae EC1118]
Length = 460
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 220
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++IDSI+ FR + Y+ R A ++ LAH + + V+ NQ
Sbjct: 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQ 273
Query: 204 V 204
V
Sbjct: 274 V 274
>gi|151941994|gb|EDN60350.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 460
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERYKGSIK 220
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++IDSI+ FR + Y+ R A ++ LAH + + V+ NQ
Sbjct: 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQ 273
Query: 204 V 204
V
Sbjct: 274 V 274
>gi|363727814|ref|XP_425477.3| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Gallus
gallus]
Length = 342
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 66 GLSEVKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYICTESVFPTARLAQLCELSPLAKP 120
G GKTQL +C++ Q+ P KG +++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGP-KGYTGGKIIFIDTENTFRPDRLRDIADRFNVDHD 184
Query: 121 KCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDK 172
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 185 AVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGE 240
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 241 LAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 274
>gi|332228953|ref|XP_003263651.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 3 [Nomascus
leucogenys]
Length = 350
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)
Query: 24 KKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
K + A+ + + D + +ST D L GG+ G +TE++G GCGKTQ C+ M
Sbjct: 63 KMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 83 LSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-------- 130
+ + G V+YI TES F RL ++ E +K+ +T
Sbjct: 123 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRE 182
Query: 131 --CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAH 185
C E + +LE + I + ++++DS+A + R +T + +R + A
Sbjct: 183 LTCDEVLQRIESLEEE--IISKGIKLVILDSVASVVRKEFDTQLQGNLKERNKFLAREAS 240
Query: 186 YLHELSIKHRIVVICTNQVTSAMT 209
L L+ + I VI TNQ+T+ ++
Sbjct: 241 SLKYLAEEFSIPVILTNQITTHLS 264
>gi|332228951|ref|XP_003263650.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Nomascus
leucogenys]
Length = 350
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH----------CYEFIDLKRTLE 142
V+YI TES F RL ++ E +K+ +T C E + +LE
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 143 SQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ I + ++++DS+A + R +T + +R + A L L+ + I VI
Sbjct: 197 EE--IISKGIKLVILDSVASVVRKEFDTQLQGNLKERNKFLAREASSLKYLAEEFSIPVI 254
Query: 200 CTNQVTSAMT 209
TNQ+T+ ++
Sbjct: 255 LTNQITTHLS 264
>gi|238498922|ref|XP_002380696.1| meiotic recombination protein (Dmc1), putative [Aspergillus flavus
NRRL3357]
gi|220693970|gb|EED50315.1| meiotic recombination protein (Dmc1), putative [Aspergillus flavus
NRRL3357]
gi|391868075|gb|EIT77298.1| meiotic recombination protein [Aspergillus oryzae 3.042]
Length = 318
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 7 MLKL-GFQEWEVNKVKD-----LKKKKAFQVGKNPIDMTEIVV--STGSEKFDSILKGGI 58
+LK+ GF E +V K+KD L F + VV STGS++FD+IL GG
Sbjct: 35 LLKIRGFSEVKVEKIKDAINKCLPSASGFITAMELSHQRKRVVRISTGSKQFDAILGGGF 94
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+ E
Sbjct: 95 QSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAER 154
Query: 115 SPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AE 170
+ + I ++L TL + F + +++IDSI FR Y
Sbjct: 155 FGVDADSARENIAYARALNSEHQLELLNTLSKE--FTGGEYRLLIIDSIMNCFRVDYCGR 212
Query: 171 DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 213 GELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 248
>gi|335772663|gb|AEH58136.1| DNA repair protein RAD51-like protein 2 [Equus caballus]
Length = 284
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKGVLYICTESVFPT 105
D L GG+ G +TE++G GCGKTQ C+ M L + + V+YI TE+ F
Sbjct: 90 LDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYIDTEAAFSA 149
Query: 106 ARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIENKVGMIVI 157
RL ++ E + DK+ +T H Y + L+R + I V +++I
Sbjct: 150 ERLVEIAESRFPSYFNNEDKLLLTSSNVHLYRELSCDEVLQRVESLEEEIISKGVKLVII 209
Query: 158 DSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 210 DSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITT 261
>gi|294868756|ref|XP_002765679.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
gi|239865758|gb|EEQ98396.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
Length = 259
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
VSTG D+ L+GG+ + EL G +G GKTQ+ + + +++ + V + +E
Sbjct: 14 VSTGMPSLDAFLRGGLPVAQLVELYGPAGSGKTQVLMSIAVAVLAGEGR--VFWFDSERT 71
Query: 103 FPTARLAQLCE-LSPLAKPKCS-DKIFITHCYEFIDLKRTLESQSGF--IENKVGMIVID 158
R LCE SP A + ++ I C + +DL R +E+ E ++VID
Sbjct: 72 LHPERFQSLCEHRSPHAPIEGMLSRMAIKECDDLLDLIRGVEALKTIPTCEGVPCLVVID 131
Query: 159 SIAGIFRNT-------------YAEDKYV--QRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
S+A R T D V +R + LA L + R V+ +N
Sbjct: 132 SVAASARCTEDIILSRMEGDKSEGSDAAVLAERQSLLNRLAVALKGAAWVQRAAVVVSNH 191
Query: 204 VTSAM--THSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSA 255
VT+ SD PALGLT+ A ++R + + + E S + ++ T Q++S+
Sbjct: 192 VTADFDSNQSDAFKPALGLTWSHAVNIRLMINRVEESSQREIVLTKSTQQMSSS 245
>gi|332319827|sp|P0CW58.1|RADA_METMI RecName: Full=DNA repair and recombination protein RadA
gi|16588837|gb|AAL26913.1|AF322003_1 RadA [Methanococcus maripaludis]
Length = 322
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP------------ 90
+STGS + ++L GGI + +TE +G G GKTQ+ Q C++LQ+ +
Sbjct: 80 LSTGSTELGTVLAGGIESQSVTEFAGMFGSGKTQIMHQTCVNLQMREKIFADLEGVVEEE 139
Query: 91 --HKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGF 147
+YI TE F R+ Q+ E + + D F+ Y D++ E
Sbjct: 140 LEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYN-SDMQMLFAEKIEDL 198
Query: 148 IE--NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ N + +++IDS+ FRN + K +R + L++L+ + +V+ TNQV
Sbjct: 199 IKGGNNIKLVIIDSLTSTFRNEFTGRGKLAERQQKLGRHMATLNKLADLYNCIVLVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 AA 260
>gi|363753334|ref|XP_003646883.1| hypothetical protein Ecym_5304 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890519|gb|AET40066.1| hypothetical protein Ecym_5304 [Eremothecium cymbalariae
DBVPG#7215]
Length = 482
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+TG D++L GGI+ GITE+ G S GK+QL +Q+ LS+Q+ G ++I T
Sbjct: 88 TTGDLDIDAVLNGGIYTHGITEIFGESSSGKSQLLMQLALSVQLPSKFNGFSGQCVFITT 147
Query: 100 ESVFPTARLAQLCELSP--LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI---ENKVGM 154
E PT RL + +L + + I+ C E+ L Q + K+ +
Sbjct: 148 EGDLPTQRLEGIIQLRKEFVENGVSQNNIYTVTCNEWAAQNHILSVQLPILLERNPKIKL 207
Query: 155 IVIDSIAGIFRNTYAEDKYVQRAHDMRD----LAHYLHELSIKHRIVVICTNQVTSAMTH 210
+++DS++ R E + + D R +A L LS KH + V+ NQV
Sbjct: 208 VIVDSVSHHLR-VELESSSFKASLDNRSQIDKMAQNLLYLSQKHGVAVVVANQV------ 260
Query: 211 SDKNIPA 217
DK +PA
Sbjct: 261 GDKLLPA 267
>gi|414887275|tpg|DAA63289.1| TPA: hypothetical protein ZEAMMB73_389397 [Zea mays]
Length = 303
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS + D IL+GGI G ITE+ G GKTQLC +C++ Q+ G LY
Sbjct: 101 IQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ + L + + Y R LE+ S IE + ++
Sbjct: 161 IDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALM 220
Query: 156 VIDSIAGIFRNTYA 169
V+DS ++R ++
Sbjct: 221 VVDSATALYRTDFS 234
>gi|301763292|ref|XP_002917067.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Ailuropoda
melanoleuca]
Length = 344
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK 92
+ ++ ++T D L GG+ G +TE++G GCGKTQ C+ M + +
Sbjct: 73 RTSASLSPAFLATTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMG 132
Query: 93 G----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRT 140
G V+YI TES F RL ++ E +K+ +T H Y + L+R
Sbjct: 133 GLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDEVLRRI 192
Query: 141 LESQSGFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIV 197
+ I V +++IDS+A + R +T + +R + A L L+ + I
Sbjct: 193 DSLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIP 252
Query: 198 VICTNQVTSAMTHS 211
VI TNQ+T+ ++ +
Sbjct: 253 VILTNQITTHLSRA 266
>gi|449272326|gb|EMC82304.1| DNA repair protein RAD51 like protein 1, partial [Columba livia]
Length = 338
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITEL G GKTQLC + ++ Q+ G +Y
Sbjct: 99 IQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 159 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALL 218
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 219 IVDSATALYRTDYSGRGELAARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 278
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 279 AADPKKPIGG 288
>gi|365766519|gb|EHN08015.1| Rad57p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 447
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 88 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 147
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 148 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 207
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQ 203
+++IDSI+ FR + Y+ R A ++ LAH + + V+ NQ
Sbjct: 208 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQ 260
Query: 204 V 204
V
Sbjct: 261 V 261
>gi|440802621|gb|ELR23550.1| meiotic recombinase Dmc1, putative [Acanthamoeba castellanii str.
Neff]
Length = 353
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSIL 54
MN +L + G E +V+K+ + K +F G ++ + VV + G D +L
Sbjct: 68 MNTRKNLLAIKGISEAKVDKILEAAGKLHFASFMTGSEMLNKRKEVVRITMGCTALDQLL 127
Query: 55 KGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKGVLYICTESVFPTARLAQ 110
GG+ ITE+ G GKTQLC +C L L +S + V YI TE F R+
Sbjct: 128 GGGVETMSITEVFGEFRTGKTQLCHTLCVTTQLPLNMSGGNGKVAYIDTEGTFRPERIKP 187
Query: 111 LCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA 169
+ E L D I + L+ ++ + +E++ ++++DSI +FR Y+
Sbjct: 188 IAERFGLDPMAALDNIVYARAFTHEHQLELIVQIAAKMVEDQYRLLIVDSITALFRVDYS 247
Query: 170 -EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----AMTHSDKNIPALG 219
+ +R + + L +++ + + V TNQVT+ AM +D P G
Sbjct: 248 GRGELAERQQKLGRMLSKLQKIAEEFNVAVFITNQVTADPGGGAMFVADAKKPIGG 303
>gi|290559566|gb|EFD92895.1| DNA repair and recombination protein RadA [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 348
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STGSE F+ +L GG+ ITE G G GK+Q+ Q+ + +Q+ G+ ++I
Sbjct: 109 ISTGSEAFNILLGGGVETQAITECYGEYGSGKSQMAFQLAVDVQLPVEKGGLDGHAIWID 168
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLESQSGFIENKVGM 154
TE F +R+ QL L + I I Y + + + + E + + K+ +
Sbjct: 169 TEGTFRPSRIEQLAASKGLDPKQALQNIKIGRAYSSDHQVLLVNKVPELVNA--DPKIKL 226
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
IV+DS+ +FR Y R + + H L L+ + I V TNQV +
Sbjct: 227 IVVDSMMALFRAEYVGRGTLADRQQKVNVVLHTLQRLADRFNIAVYITNQVMA 279
>gi|148727866|gb|ABR08568.1| Dmc1 [Carassius auratus x Cyprinus carpio]
Length = 342
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKN-PIDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K FQ I +++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVDKIKEAAGKLMICGFQTASEYSIKRKQVLHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P V++I +E+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGEYGYPGGKVIFIDSENTFRPERLKDIADRFSVDHEA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|254577177|ref|XP_002494575.1| ZYRO0A04708p [Zygosaccharomyces rouxii]
gi|238937464|emb|CAR25642.1| ZYRO0A04708p [Zygosaccharomyces rouxii]
Length = 463
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 2 NHTDQMLKLGFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAG 61
N D+ K E++ +++ + + K + P+ T V D L GGI+
Sbjct: 52 NEVDKFQKSMIAEYD-DQLMNFNEVKPISEVEGPVPFTTTDVG-----IDEALGGGIYTH 105
Query: 62 GITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCEL-SP 116
GITE+ G S GK+QL +Q+CLS+Q+ G+ +YI TE PT RLA +
Sbjct: 106 GITEVFGESSTGKSQLLMQLCLSVQLPTNMGGIKGKCVYISTEGDLPTQRLASMISAREE 165
Query: 117 LAKPKCS-DKIFITHCYEFIDLKRTLESQSG-FIENKVG---MIVIDSIAGIFRNTYAED 171
L K S + ++ C + I+ L Q +EN G +I+IDSI+ R
Sbjct: 166 LVKHGVSQENVYTVTCCDLINQDHILNVQLPILLENSRGAIKLIIIDSISHHMRVELPTR 225
Query: 172 KYVQRAHDMR----DLAHYLHELSIKHRIVVICTNQVT 205
+ + D R +A L +L+ KH + V+ NQV+
Sbjct: 226 DF-KDHQDNRFYVDQVAERLLDLANKHALAVVVANQVS 262
>gi|254166602|ref|ZP_04873456.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|254168555|ref|ZP_04875399.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|289596107|ref|YP_003482803.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|197622610|gb|EDY35181.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|197624212|gb|EDY36773.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
gi|289533894|gb|ADD08241.1| DNA repair and recombination protein RadA [Aciduliprofundum boonei
T469]
Length = 324
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS FD++L GG+ ITE G G GKTQ+ Q+ +++Q+ + G+ +YI
Sbjct: 92 LTTGSSDFDTLLGGGLETQAITEFFGEFGSGKTQIMHQLAVNVQLPKDKGGLEGHAVYID 151
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLESQSGFIENKVGM 154
TE+ F R+ Q+ E L + KI + + + + + + +E E V +
Sbjct: 152 TENTFRPERIKQMAEALELDPVEVLKKIHVARAFNSNHQILLVDKAMELAK---EYPVRL 208
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--AMTHS 211
+++DS+ FR Y +R + H L + + + VV TNQV+S M
Sbjct: 209 LIVDSLTAHFRAEYVGRGSLAERQQLLNKHMHDLLKFADLNNAVVAVTNQVSSNPGMMFG 268
Query: 212 DKNIPALG 219
D P G
Sbjct: 269 DPTQPIGG 276
>gi|160331524|ref|XP_001712469.1| rad51 [Hemiselmis andersenii]
gi|159765917|gb|ABW98144.1| rad51 [Hemiselmis andersenii]
Length = 328
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D IL+GGI G ITEL G GKTQLC + +S Q+S G ++
Sbjct: 89 ISLTTGSQELDKILRGGIETGSITELIGEYRTGKTQLCHNIAVSAQLSYDQGGGEGRAIF 148
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLES-QSGFIENKVGMI 155
+ TE F R+ + L + I +T Y L S S ++ K ++
Sbjct: 149 LDTEGTFRPERIVDIAGRFKLNSLDVLENIALTRAYNVDQQLEILNSVGSMMVKYKFAVL 208
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R + + R + L L + I V+ TNQV +
Sbjct: 209 IVDSIIALYRAEFIGRGELSARQQHLGRFIKQLQRLCDEFNIAVLITNQVVA 260
>gi|347523524|ref|YP_004781094.1| DNA repair and recombination protein RadA [Pyrolobus fumarii 1A]
gi|343460406|gb|AEM38842.1| DNA repair and recombination protein RadA [Pyrolobus fumarii 1A]
Length = 322
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D++L GGI ITE G G GKTQ+C Q+ +++Q+ G+ +YI
Sbjct: 89 ITTGSRNLDALLGGGIETRMITEFFGEYGSGKTQICHQLAVNVQLPPEQGGLGARAVYID 148
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVI 157
TE F R+ + + L K + I+ +E + + + ++++
Sbjct: 149 TEGTFRWERIENMAKRWGLDPDKVMENIYYVRAINSDHQMAIVEELFDLVPKQNIKLVIV 208
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI FR Y ++ +R + H L L+ + I ++ TNQV +
Sbjct: 209 DSITSHFRAEYPGRERLAERQQKLNRHLHQLMRLAELYDIAIVITNQVMA 258
>gi|71028324|ref|XP_763805.1| meiotic recombination protein DMC1 [Theileria parva strain Muguga]
gi|68350759|gb|EAN31522.1| meiotic recombination protein DMC1, putative [Theileria parva]
Length = 346
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIV--------VSTGSEKFDSILKGGIHAGG 62
G E +V+K+ D K +V + I +E+ ++TGSE + +L GGI
Sbjct: 73 GLTELKVDKISDCASK--LEVTNSFISASELYKIRKSILKINTGSEMLNRLLNGGIETMS 130
Query: 63 ITELSGASGCGKTQLCLQMCLSLQVSQPHKG--VLYICTESVFPTARLAQLCELSPLAKP 120
ITEL G + GKTQ+C + ++ Q+ P + V YI TE+ F ++ ++CE L
Sbjct: 131 ITELFGENRTGKTQICHTISVTSQIINPTEPFKVCYIDTENTFRPEKIEKICERFDLDPM 190
Query: 121 KCSDKIFITHCYEFIDLKRTLES-QSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
D I + Y L + + + S +E + +++IDSI +FR Y+ + +R
Sbjct: 191 ITLDNILYSKAYTNEHLLQLISNITSKMVEERFVLLIIDSIMSLFRVDYSGRGELAERQQ 250
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L L +++ + + ++ TN V S
Sbjct: 251 RLNKLLSNLLKIAQQFNVAIVLTNHVIS 278
>gi|354545816|emb|CCE42544.1| hypothetical protein CPAR2_201870 [Candida parapsilosis]
Length = 324
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ K F ++ E V ++TGS +FD +L GG+ + ITE
Sbjct: 50 GLSEVKVEKIKEAAGKIQTTGFVSASVVAELRENVFKITTGSSQFDEMLGGGVTSMSITE 109
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE---LSPLA 118
+ G CGKTQLC +C++ Q+++ G V +I TE F R+ + E + P+
Sbjct: 110 VFGEYRCGKTQLCHTLCVAAQLTKSLGGAEGKVAFIDTEGTFRPERIKAIAERFDVDPMV 169
Query: 119 KPKCSDKIFITHCYEFIDLKRTLESQ----------SGFIENKVGMIVIDSIAGIFRNTY 168
C E I R L S+ S ++VIDSI FR Y
Sbjct: 170 ------------CLENISYARALNSEHQIELVEQLGSELATGSYRLLVIDSILACFRVDY 217
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + ++ + YL ++ + + V TNQV S
Sbjct: 218 SGRGELNEKQQKLNQHLAYLTRVAEDYNVAVFLTNQVQS 256
>gi|302697701|ref|XP_003038529.1| hypothetical protein SCHCODRAFT_103780 [Schizophyllum commune H4-8]
gi|300112226|gb|EFJ03627.1| hypothetical protein SCHCODRAFT_103780, partial [Schizophyllum
commune H4-8]
Length = 339
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+E+V ++TGS++ D++L GGI G ITEL G GK+QLC + ++ Q+ G
Sbjct: 94 SELVHITTGSKQLDALLGGGIETGAITELFGEFRTGKSQLCHTLAVTCQLPVSMGGGEGK 153
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
LYI TE F RL + E L + D + Y L S S + E++
Sbjct: 154 CLYIDTEGTFRPVRLLAVAERFGLNGEEVLDNVAYARAYNADHQNSLLTSASALMSESRF 213
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++++DS ++R ++ + R + + L L+ + I V+ TNQV S
Sbjct: 214 CLLIVDSCTALYRTDFSGRGELSSRQNHLGKFLRTLQRLADEFGIAVVVTNQVMS 268
>gi|326911974|ref|XP_003202330.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Meleagris gallopavo]
Length = 342
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 66 GLSEVKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P+ +++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGPNGYTGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 185
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 241
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 242 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 274
>gi|313231030|emb|CBY19028.1| unnamed protein product [Oikopleura dioica]
Length = 334
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+KD K D E + TGS + D +L GGI + ITE
Sbjct: 59 GISEAKVDKIKDAANKLEANNFITGYDFAEKRKACFRIPTGSSELDRVLGGGIESMAITE 118
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQ-PHKG--VLYICTESVFPTARLAQLC-----ELSPL 117
+ G GKTQL +C++ Q+ H G V YI TE+ F RL + + +
Sbjct: 119 VFGEFRTGKTQLAHTLCVTTQMPGIGHSGGKVAYIDTENTFRPDRLRPIAARFNLDADAI 178
Query: 118 AKPKCSDKIFIT-HCYEFIDL-KRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
+ + F + H E +DL S+ G + +++IDSI G+FR Y+ +
Sbjct: 179 LQNVVYARAFTSEHQMELLDLVAAQFYSEPGVFK----ILIIDSIIGLFRVDYSGRGELS 234
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + + ++S ++ +VV TNQ+T+ P G+T++
Sbjct: 235 ERQQKLAQMLSKVQKISEEYNVVVYITNQMTAD--------PGAGMTFQ 275
>gi|38571810|gb|AAH62849.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Danio rerio]
Length = 338
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 99 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + + L S + E++ ++
Sbjct: 159 IDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALL 218
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 219 IVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 278
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 279 SADPKKPIGG 288
>gi|347800669|ref|NP_998371.2| DNA repair protein RAD51 homolog 1 [Danio rerio]
Length = 340
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 101 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + + L S + E++ ++
Sbjct: 161 IDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 221 IVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 280
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 281 SADPKKPIGG 290
>gi|403417754|emb|CCM04454.1| predicted protein [Fibroporia radiculosa]
Length = 345
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 29/227 (12%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTE-----IVVSTGSEKFD 51
M QMLK+ G E +V K+K+ K +F G +++ E ++VSTGS+ D
Sbjct: 60 MTTRRQMLKIKGMSEAKVEKIKEAAHKVLGSSFATG---LEIQEKRKRVLMVSTGSKSVD 116
Query: 52 SILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTAR 107
+IL GGI + ITE+ G GKTQL M + Q+ G V YI TE F R
Sbjct: 117 TILGGGIMSQSITEVYGEYRTGKTQLAHTMSVVTQLPPDMGGAAGKVAYIDTEGTFRPDR 176
Query: 108 LAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENK-VGMIVIDSI 160
+ + + + + I + E I+ E F E+K ++++DSI
Sbjct: 177 IRSIAQRFGVNGDMALENILYARAFNSEHQMELIN-----ECSIRFAEDKDFRLLIVDSI 231
Query: 161 AGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
FR Y+ + +R + + L +LS ++ I ++ TNQV S
Sbjct: 232 MACFRTDYSGRGELSERQQKLAQMLSKLSKLSEEYNIAILLTNQVQS 278
>gi|366997935|ref|XP_003683704.1| hypothetical protein TPHA_0A01870 [Tetrapisispora phaffii CBS 4417]
gi|357521999|emb|CCE61270.1| hypothetical protein TPHA_0A01870 [Tetrapisispora phaffii CBS 4417]
Length = 332
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP------IDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K QVG P I +STGS++ D+IL GGI IT
Sbjct: 57 GLSEIKVEKIKE-AAGKIIQVGFIPATIQLNIRKKVYSLSTGSKQLDNILGGGIMTMSIT 115
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+ E L
Sbjct: 116 EVFGEFRCGKTQMSHTLCVTTQLPRELGGAEGKVAYIDTEGTFRPERIKQIAEKYGLDPE 175
Query: 121 KCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQR 176
C D + ++L L + E K +IV+DSI FR Y + +R
Sbjct: 176 SCLDNVSYARALNSEHQMELVEKLGEELSTGEYK--LIVVDSIMANFRVDYCGRGELNER 233
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L+ L+ + V TNQV S
Sbjct: 234 QQKLNQHLFKLNRLAEEFNCAVFMTNQVQS 263
>gi|221053592|ref|XP_002258170.1| Meiotic recombination protein DMC1-like protein [Plasmodium
knowlesi strain H]
gi|193808003|emb|CAQ38707.1| Meiotic recombination protein DMC1-like protein,putative
[Plasmodium knowlesi strain H]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS D L GGI + ITEL G + CGKTQ+C + +S Q+ + G V YI
Sbjct: 110 ITTGSSSLDRTLGGGIESMSITELFGENRCGKTQICHTLAVSAQLPRSAGGGNGKVCYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVI 157
TE F ++ ++ E + D I + L + L S + E ++V+
Sbjct: 170 TEGTFRPEKICKIAERYGIDGEDVLDNILYARAFTHEHLYQLLAVSAAKMCEEPFALLVV 229
Query: 158 DSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI +FR ++ + +R + L +L + I V+ TNQV S
Sbjct: 230 DSIISLFRVDFSGRGELSERQQKLNKTLSVLSKLGEQFNIAVLITNQVMS 279
>gi|432947216|ref|XP_004083949.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Oryzias
latipes]
Length = 340
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 101 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + + L S + E++ ++
Sbjct: 161 IDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 221 IVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 280
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 281 SADPKKPIGG 290
>gi|147900484|ref|NP_001081236.1| DNA repair protein RAD51 homolog A [Xenopus laevis]
gi|2500105|sp|Q91918.1|RA51A_XENLA RecName: Full=DNA repair protein RAD51 homolog A; Short=xRAD51.1
gi|1054624|dbj|BAA07501.1| XRad51.1 [Xenopus laevis]
gi|57033002|gb|AAH88930.1| LOC397726 protein [Xenopus laevis]
Length = 336
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GG+ G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 97 IQISTGSKELDKLLQGGVETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 157 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 216
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 217 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 276
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 277 AADPKKPIGG 286
>gi|304367643|gb|ADM26629.1| DNA repair protein rad51 [Polypedilum vanderplanki]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 8/179 (4%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VL 95
+I ++TGS + D +L GGI G ITE+ G GKTQL + ++ Q+ G L
Sbjct: 104 QISITTGSRELDKLLGGGIETGSITEVFGEFRSGKTQLAHTLAVTCQLPANSGGGQGKCL 163
Query: 96 YICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVG 153
YI TE F RL+ + E + + D I + Y D + TL + I + +
Sbjct: 164 YIDTEGTFRPERLSSIAERFKMDPNEVLDNIAVARAYN-TDHQLTLLVHASAIMADTRFA 222
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++V+DS ++R Y+ + R + +L ++ + I V+ TNQV + + +S
Sbjct: 223 LLVVDSATALYRTDYSGRGELAARQMHLAKFMRHLLRMADEFGIAVLITNQVVANVANS 281
>gi|345560368|gb|EGX43493.1| hypothetical protein AOL_s00215g229 [Arthrobotrys oligospora ATCC
24927]
Length = 661
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
+V G + D +L GG+ G + E+ G SG GKTQL L++C S+Q ++ +YICTES
Sbjct: 273 MVEFGDDGVDGLLNGGVMTGSLVEIVGESGVGKTQLLLRLCFSIQQPPHNRSAIYICTES 332
Query: 102 VFPTARLAQLCE-----LSPLAKPKCSDKIFITHCYEFIDLKRTLESQ--SGFIENKVGM 154
T R+ + E P ++I C L+ ++ Q + K G+
Sbjct: 333 QISTKRMVTMLEDLVSRKVPGYAALSMNRIQTAMCQYLETLEHIVKYQLPRAIEQFKAGL 392
Query: 155 IVIDSIAGIFR 165
+V+DSIA FR
Sbjct: 393 VVVDSIAANFR 403
>gi|384494865|gb|EIE85356.1| DNA repair protein RAD51 [Rhizopus delemar RA 99-880]
Length = 333
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
I ++TGS++ D +L GGI G ITE+ G GK+QLC + ++ Q+ G L+
Sbjct: 93 ITITTGSKELDRLLGGGIETGSITEIFGEFRTGKSQLCHMLSVTAQLPLDMGGAQGKCLF 152
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE+ F R+ + + L D I Y D + TL Q+ + E + +
Sbjct: 153 IDTENTFRPNRILSIAQRYSLDGQDTLDNIAYARAYN-TDHQTTLLIQAAAMMAETRFAV 211
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SA 207
+++DS ++R YA + R + L L+ + + V+ TNQV ++
Sbjct: 212 LIVDSAMALYRTDYAGRGELAARQIHLAQFLRQLQRLADEFGVAVVITNQVVAQVDGGAS 271
Query: 208 MTHSDKNIPALG 219
M + D PA G
Sbjct: 272 MFNPDPKKPAGG 283
>gi|332842559|ref|XP_003314455.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Pan troglodytes]
Length = 366
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQ 144
V+YI TES F RL ++ E +K+ +T H Y + L+R +
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
I + ++++DS+A + R + + +R + A L L+ + I VI T
Sbjct: 197 EEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILT 256
Query: 202 NQVTSAMT 209
NQ+T+ ++
Sbjct: 257 NQITTHLS 264
>gi|11498598|ref|NP_069826.1| DNA repair and recombination protein RadA [Archaeoglobus fulgidus
DSM 4304]
gi|3914552|sp|O29269.1|RADA_ARCFU RecName: Full=DNA repair and recombination protein RadA
gi|2649602|gb|AAB90248.1| DNA repair protein RAD51 (radA) [Archaeoglobus fulgidus DSM 4304]
Length = 337
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS+ D +L GG+ ITE G G GKTQ+C Q+ +++Q+ + G V+ I
Sbjct: 90 ITTGSKDLDELLGGGVETQAITEFFGEFGSGKTQICHQLAVNVQLPEDEGGLEGSVIIID 149
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE------FIDLKRTLESQSGFIENKV 152
TE+ F R+ Q+ E L + I++ Y +D + L + V
Sbjct: 150 TENTFRPERIIQMAEAKGLDGNEVLKNIYVAQAYNSNHQMLLVDNAKELAEKLKKEGRPV 209
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+I++DS+ FR Y R + H L + + ++ TNQV +
Sbjct: 210 RLIIVDSLMSHFRAEYVGRGTLADRQQKLNRHLHDLMKFGELYNAAIVVTNQVMA 264
>gi|4996226|dbj|BAA78377.1| Rad51 [Cynops pyrrhogaster]
Length = 337
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 98 IQVTTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 158 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 217
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 218 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 277
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 278 AADPKKPIGG 287
>gi|340379463|ref|XP_003388246.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Amphimedon
queenslandica]
Length = 356
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV-- 94
D+ IV T S D +L GG+ G ITE G+ G GKTQL +Q+ + + +P G
Sbjct: 54 DLDHIV--TFSAGIDGMLGGGVPVGKITEFCGSPGIGKTQLSIQLAIDATLPEPFGGCGG 111
Query: 95 --LYICTESVFPTARLAQLCELS-----PLAKPKCSDKIFIT-------------HCY-- 132
+YI TE F R+ Q+ + +AK ++ H Y
Sbjct: 112 HSVYIDTEGSFVIDRVVQIATATVRHVHSVAKSSADPELLAVADGYTLEVVLGNIHYYRC 171
Query: 133 ----EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH 188
+ I L L I +KV +IV+DSIA FR+++ + R + LA
Sbjct: 172 HNHIQLIALSNILHQTISNINSKVCLIVVDSIASPFRSSFKDMGLRHRL--LSGLAQTFL 229
Query: 189 ELSIKHRIVVICTNQVTSAMTHSDKN--IPALGLTYERAHDMRDLAHY 234
+L+ + + V+ TNQ+T+ + ++ +PALG ++ +R + ++
Sbjct: 230 KLATQFSLAVVFTNQMTTKTQSNGQSQLVPALGESWGHVCTIRVILYW 277
>gi|46255039|ref|NP_598193.2| DNA repair protein RAD51 homolog 2 isoform 3 [Homo sapiens]
gi|38258892|sp|O15315.2|RA51B_HUMAN RecName: Full=DNA repair protein RAD51 homolog 2; Short=R51H2;
AltName: Full=RAD51 homolog B; Short=Rad51B; AltName:
Full=RAD51-like protein 1
gi|20987416|gb|AAH30219.1| RAD51-like 1 (S. cerevisiae) [Homo sapiens]
gi|61364588|gb|AAX42568.1| RAD51-like 1 [synthetic construct]
gi|123980046|gb|ABM81852.1| RAD51-like 1 (S. cerevisiae) [synthetic construct]
gi|123994811|gb|ABM85007.1| RAD51-like 1 (S. cerevisiae) [synthetic construct]
gi|261860168|dbj|BAI46606.1| RAD51-like 1 [synthetic construct]
Length = 384
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT-- 129
Q C+ M + + G V+YI TES F RL ++ E +K+ +T
Sbjct: 116 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSS 175
Query: 130 --HCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDM 180
H Y + L+R + I + ++++DS+A + R + + +R +
Sbjct: 176 KVHLYRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFL 235
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTSAMT 209
A L L+ + I VI TNQ+T+ ++
Sbjct: 236 AREASSLKYLAEEFSIPVILTNQITTHLS 264
>gi|145349400|ref|XP_001419122.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579353|gb|ABO97415.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 343
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS K D +L+GGI +G +TE+ G GKTQL + ++ Q+ H G LY
Sbjct: 104 IYITTGSAKVDELLQGGIESGSVTEIYGEFRTGKTQLMHTLAVTSQMPIEHGGGEGKCLY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL Q+ E + D + + L + +G + E + ++
Sbjct: 164 IDTEGTFRPQRLIQIAERFNMDPSAVLDNVAYAKAHNVEHQSELLLAAAGMMAETRFSLM 223
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDS+ ++R Y + R + L L+ + + VI +NQV +
Sbjct: 224 IIDSVTNLYRTEYEGRGELSARQMHLGKFLRQLARLADEFGVAVIVSNQVVA 275
>gi|297619372|ref|YP_003707477.1| DNA repair and recombination protein RadA [Methanococcus voltae A3]
gi|297378349|gb|ADI36504.1| DNA repair and recombination protein RadA [Methanococcus voltae A3]
Length = 322
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 29/187 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ---------------- 86
+ST S + D++L GG+ + +TE +G G GKTQ+ Q C++LQ
Sbjct: 80 LSTNSGELDNVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQRPDCIFFDESAVSDEE 139
Query: 87 VSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG 146
++ P +YI TE F R+ Q+ E + + D F+ Y D++ +
Sbjct: 140 LAAPK--AVYIDTEGTFRPERIMQMAEHAGIEGQTILDNTFVARAYN-SDMQMLFAEK-- 194
Query: 147 FIE------NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
IE N + ++VIDS+ FRN Y K +R + L++L+ VV+
Sbjct: 195 -IEDLINDGNNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVL 253
Query: 200 CTNQVTS 206
TNQV++
Sbjct: 254 VTNQVSA 260
>gi|2108337|emb|CAA73605.1| Rad51 homologue [Trypanosoma brucei]
Length = 313
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ G LY
Sbjct: 73 IMVTTGSREVDKLLGGGIEVGSITELFGEFRTGKTQLCHTLCVTCQLPLSQGGGEGMALY 132
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I TE F RL + E L + + Y ++ L++ + E++V +I
Sbjct: 133 IDTEGTFRPERLVAVAERYSLDPEAVLENVACARAYNTDHQQQLLLQASATMAEHRVAII 192
Query: 156 VIDSIAGIFRNTY 168
V+DS ++R Y
Sbjct: 193 VVDSATALYRTDY 205
>gi|167042704|gb|ABZ07424.1| putative recA bacterial DNA recombination protein [uncultured
marine crenarchaeote HF4000_ANIW133O4]
Length = 367
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TG+E D +L+GG+ +TE+ G G GKTQ C MC+++Q + G VLYI
Sbjct: 87 ITTGTECLDLLLEGGLETQALTEVYGEFGSGKTQFCHTMCVTVQKPKEEGGLEGTVLYID 146
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVI 157
TE+ F R+ + ++ + K D+I + Y LE S I EN V ++++
Sbjct: 147 TENTFRPERIVSIAKIHGMDPEKVLDRIIVARAYNSAHQTLILEEASQMIKENNVKLLIV 206
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
DS G+FR Y R + H L ++ + + TNQV ++
Sbjct: 207 DSAVGLFRAEYLGRGTLAIRQQRLNKFVHLLVRIAEVYNCAALATNQVMAS 257
>gi|60810438|gb|AAX36146.1| RAD51-like 1 [synthetic construct]
Length = 385
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT-- 129
Q C+ M + + G V+YI TES F RL ++ E +K+ +T
Sbjct: 116 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSS 175
Query: 130 --HCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDM 180
H Y + L+R + I + ++++DS+A + R + + +R +
Sbjct: 176 KVHLYRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFL 235
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTSAMT 209
A L L+ + I VI TNQ+T+ ++
Sbjct: 236 AREASSLKYLAEEFSIPVILTNQITTHLS 264
>gi|294656166|ref|XP_458414.2| DEHA2C16698p [Debaryomyces hansenii CBS767]
gi|199430910|emb|CAG86496.2| DEHA2C16698p [Debaryomyces hansenii CBS767]
Length = 350
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 18/194 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 105 ICITTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLESQSGFIENKV 152
I TE F RL + + L C D + Y +F L + S E++
Sbjct: 165 IDTEGTFRPVRLVSIAQRYGLNPEDCLDNVAYARAYNAEHQFQLLNHAAQMMS---ESRF 221
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------T 205
+++DSI ++R Y+ + R + L L+ + I V+ TNQV
Sbjct: 222 SCLIVDSIMSLYRTDYSGRAELSARQTHVAKYMRTLQRLADEFGIAVVITNQVVAQVDGA 281
Query: 206 SAMTHSDKNIPALG 219
SAM + D P G
Sbjct: 282 SAMFNPDPKKPIGG 295
>gi|259488647|tpe|CBF88254.1| TPA: DNA repair protein (Rad57), putative (AFU_orthologue;
AFUA_1G12520) [Aspergillus nidulans FGSC A4]
Length = 554
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D++L GGI G +TE++G SG GKTQ L + L++Q+ P + +YI
Sbjct: 104 TISTLDAALDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGAGRSAIYIS 163
Query: 99 TESVFPTARLAQLCE----LSPLAKPKCSD--KIFITHCYEFIDLKRTLESQ--SGFIEN 150
TE+ T RL+QL E LS L++ + +I + + L Q
Sbjct: 164 TEAPLATNRLSQLIECHPYLSTLSREQAPSLGRILSINAMDLESQDHILNYQLPVAIKRY 223
Query: 151 KVGMIVIDSIAGIFRNTYAE---DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
VG++VIDSI +R + R+ ++ L L L+ + ++ NQV+
Sbjct: 224 NVGLVVIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDR 283
Query: 208 MTHSDKNIPALGLTYER 224
D +P +T +R
Sbjct: 284 F-EGDAPLPFSRVTGDR 299
>gi|345803591|ref|XP_547868.3| PREDICTED: DNA repair protein RAD51 homolog 2 [Canis lupus
familiaris]
Length = 350
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++T D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 83 LATTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGDVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y + L+R + I
Sbjct: 143 TESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDAVLQRIESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V +++IDS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 203 GVKLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKYLAEEFSIPVILTNQITTH 262
Query: 208 MTHS 211
++ +
Sbjct: 263 LSRA 266
>gi|291389878|ref|XP_002711438.1| PREDICTED: DMC1 dosage suppressor of mck1 homolog [Oryctolagus
cuniculus]
Length = 340
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGASGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|41615212|ref|NP_963710.1| DNA repair and recombination protein RadA [Nanoarchaeum equitans
Kin4-M]
gi|73913726|sp|Q74MX9.1|RADA_NANEQ RecName: Full=DNA repair and recombination protein RadA
gi|40068936|gb|AAR39271.1| NEQ426 [Nanoarchaeum equitans Kin4-M]
Length = 325
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++T S+ DS+L GGI +TE G G GKTQ+ Q+ + +Q+ P +G L YI
Sbjct: 89 ITTMSKNLDSLLGGGIETAALTEFYGEYGSGKTQVGHQLAVDVQLP-PEQGGLEGKAVYI 147
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIE--NKVG 153
TE F R+ Q+ E L K ++ H F + L ++ I +
Sbjct: 148 DTEGTFRPERIKQMAEALDLDPKKALKNVY--HMKVFNTDHQMLAARKAEELIRKGEPIK 205
Query: 154 MIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
+IV+DS+ +FR Y + +R H + H L ++ + + + TNQV M D
Sbjct: 206 LIVVDSLTALFRAEYTGRGQLAERQHKLGRHVHDLLRIAELYNVAIYVTNQV---MAKPD 262
Query: 213 KNIPAL 218
IP L
Sbjct: 263 SFIPGL 268
>gi|19074882|ref|NP_586388.1| DNA REPAIR PROTEIN RAD51 HOMOLOG [Encephalitozoon cuniculi GB-M1]
gi|19069607|emb|CAD25992.1| DNA REPAIR PROTEIN RAD51 HOMOLOG [Encephalitozoon cuniculi GB-M1]
Length = 334
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D +L GG +G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 94 VYLTTGSSEVDKLLSGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMY 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F + RL + E L + D I Y + L S + E+K ++
Sbjct: 154 IDTEGTFRSERLVPIAERFGLDPNEVMDNISYARAYNSDHQSQLLIKASAMMSESKYSVL 213
Query: 156 VIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHE---LSIKHRIVVICTNQVTS 206
+IDS ++R ++ + LA YL L+ RI VI TNQV S
Sbjct: 214 IIDSATALYRTDFSGRG--ELGARQLHLAKYLRSLVNLAETFRIAVIITNQVVS 265
>gi|358057228|dbj|GAA96837.1| hypothetical protein E5Q_03510 [Mixia osmundae IAM 14324]
Length = 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS+ D++L GGI G ITEL G GK+Q+C Q+ ++ Q+ G LY
Sbjct: 101 VTITTGSKNLDNVLGGGIETGAITELFGEFRTGKSQICHQLAVTCQLPIDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL--ESQSGFIENKVGM 154
I TE F RL + E + + D + Y D +++L E+ + E++ +
Sbjct: 161 IDTEGTFRPVRLLAIAERYGMNGEEVLDNVAYARAYN-ADHQQSLLVEASAMMAESRFCL 219
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+++DS ++R +A + R + L L+ ++ I V+ TNQV + + ++
Sbjct: 220 LIVDSCTSLYRTDFAGRGELSARQTHLARFLRSLLRLADEYGIAVVITNQVVAQVDNA 277
>gi|146330537|gb|ABQ23182.1| Dmc1 [Carassius auratus]
Length = 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKN-PIDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K FQ I ++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVDKIKEAAGKLMICGFQAASEYSIKRKQVFHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P V++I +E+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGEYGYPGGKVIFIDSENTFRPERLKDIADRFSVDHEA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|119601365|gb|EAW80959.1| RAD51-like 1 (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 420
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHK 92
D + +ST D L GG+ G +TE++G GCGKTQ C+ M L +
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 93 GVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQ 144
V+YI TES F RL ++ E +K+ +T H Y + L+R +
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
I + ++++DS+A + R + + +R + A L L+ + I VI T
Sbjct: 197 EEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILT 256
Query: 202 NQVTSAMT 209
NQ+T+ ++
Sbjct: 257 NQITTHLS 264
>gi|308810088|ref|XP_003082353.1| RAD51-like protein 2 (ISS) [Ostreococcus tauri]
gi|116060821|emb|CAL57299.1| RAD51-like protein 2 (ISS) [Ostreococcus tauri]
Length = 570
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 45 TGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTE 100
T E D +L GGI +G ITE G G GKTQ+C Q+C+S + G +Y+ TE
Sbjct: 103 TCCEALDDVLDGGIGSGEITEFCGCPGVGKTQMCTQVCVSASTPEAFGGTDGEAVYVDTE 162
Query: 101 SVFPTARL-------------AQLCE------------LSPLAKPKCSDKIFITHCYEFI 135
F R + CE L K I + C+E
Sbjct: 163 GSFMADRAMDVASALVEHLRRMEACESDSERRTEMKAALEGYTAEKILSGIHLFRCHEVT 222
Query: 136 DLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIK 193
+L LE+ FI +V ++VIDS+A FR + + R + + + L ++
Sbjct: 223 ELLAVLETLGEFIAEHPRVRLVVIDSVAFHFRQDFQD--MALRTTILSKMTNRLMSIATS 280
Query: 194 HRIVVICTNQVT--SAMTHSDKNIPALGLTYERA 225
+ V+ NQVT + +PALG +Y A
Sbjct: 281 RDVAVVTVNQVTVKPQQDGPARLVPALGESYAHA 314
>gi|449328634|gb|AGE94911.1| DNA repair protein rad51 like-protein [Encephalitozoon cuniculi]
Length = 334
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D +L GG +G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 94 VYLTTGSSEVDKLLSGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMY 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F + RL + E L + D I Y + L S + E+K ++
Sbjct: 154 IDTEGTFRSERLVPIAERFGLDPNEVMDNISYARAYNSDHQSQLLIKASAMMSESKYSVL 213
Query: 156 VIDSIAGIFRNTYA--EDKYVQRAHDMRDLAHYLHE---LSIKHRIVVICTNQVTS 206
+IDS ++R ++ + ++ H LA YL L+ RI VI TNQV S
Sbjct: 214 IIDSATALYRTDFSGRGELGARQLH----LAKYLRSLVNLAETFRIAVIITNQVVS 265
>gi|402884236|ref|XP_003905593.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Papio
anubis]
Length = 279
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|346470495|gb|AEO35092.1| hypothetical protein [Amblyomma maculatum]
Length = 337
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D +L GGI G ITE+ G GKTQLC + ++ Q+ H G LY
Sbjct: 98 VQITTGSKELDKLLGGGIETGSITEMFGEFRTGKTQLCHMLAVTCQLPIEHSGGEGKCLY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L+ D + Y + L S + E + ++
Sbjct: 158 IDTEGTFRPERLLAVADKYGLSGQDVLDNVAYARAYNSDHQTQLLIQASAMMAETRYALL 217
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 218 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 277
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 278 SADPKKPIGG 287
>gi|323338366|gb|EGA79593.1| Rad57p [Saccharomyces cerevisiae Vin13]
Length = 216
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI TE PT
Sbjct: 1 MDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLPT 60
Query: 106 ARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVGMIVIDS 159
RL + P + IF C + I+ + + Q + + + +++IDS
Sbjct: 61 QRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIKLVIIDS 120
Query: 160 IA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ FR + Y+ R A ++ LAH + + V+ NQV
Sbjct: 121 ISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQV 168
>gi|412987893|emb|CCO19289.1| DNA repair protein RAD51 homolog 1 [Bathycoccus prasinos]
Length = 321
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIV--------------VSTGSEKFDSILKG 56
GF + +V+K+ + KK NP ++ V ++TGS+ D +L G
Sbjct: 43 GFSDAKVDKLLEACKKAL----SNPSELGGFVTAATFREMRKDVVRITTGSKAVDEVLAG 98
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
GI ITE+ G CGKTQLC + +S Q+ G V YI TE F + R+ ++
Sbjct: 99 GIQTRSITEIHGEWRCGKTQLCHTLAVSTQLPFEMGGGYAKVAYIDTEGTFRSERILEIA 158
Query: 113 ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMIVIDSIAGIFRNTY-AE 170
E + + I I + ++ L + +G E ++++DS+ +R +
Sbjct: 159 ERYGMDGEAVLENIMIARTFTHEQMEDALLAIAGKMAEEPFKLLIVDSVMAHYRVDFTGR 218
Query: 171 DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L +L+ + + ++CTNQV S
Sbjct: 219 GELSGRQQRLGQFMSKLSKLADEFNLAIVCTNQVQS 254
>gi|410927852|ref|XP_003977354.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Takifugu
rubripes]
Length = 340
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 101 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + + L S + E++ ++
Sbjct: 161 IDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 221 IVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 280
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 281 SADPKKPIGG 290
>gi|348537158|ref|XP_003456062.1| PREDICTED: DNA repair protein RAD51 homolog B [Oreochromis
niloticus]
gi|63852088|dbj|BAD98461.1| RecA homolog Rad51 [Oreochromis niloticus]
Length = 336
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 97 IQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + + L S + E++ ++
Sbjct: 157 IDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 216
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 217 IVDSATALYRTDYSGRGELSARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 276
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 277 SADPKKPIGG 286
>gi|178056768|ref|NP_001116653.1| DNA repair protein RAD51 homolog 1 [Sus scrofa]
gi|167600352|gb|ABZ89107.1| Rad51 [Sus scrofa]
gi|168085455|dbj|BAG09486.1| DNA repair protein RAD51 [Sus scrofa]
Length = 339
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
+IDS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IIDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|365983360|ref|XP_003668513.1| hypothetical protein NDAI_0B02350 [Naumovozyma dairenensis CBS 421]
gi|343767280|emb|CCD23270.1| hypothetical protein NDAI_0B02350 [Naumovozyma dairenensis CBS 421]
Length = 361
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K +VG P +D+ + V +STGS++ DSIL GGI + IT
Sbjct: 86 GLSEVKVEKIKE-AANKIIKVGFIPATVQLDIRQKVFALSTGSKQLDSILGGGIMSMSIT 144
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+ + L
Sbjct: 145 EVFGEFRCGKTQMSHTLCVTSQLPREMGGAEGKVAYIDTEGTFRPERIKQIAQNYDLDPD 204
Query: 121 KCSDKIFIT------HCYEFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDK 172
C + + H E ++ L L S + ++++DSI FR Y +
Sbjct: 205 SCLENVSYARALNSEHQMELVEQLGEALSS------GEYRLVIMDSIMANFRVDYTGRGE 258
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L+ ++ + + V TNQV S
Sbjct: 259 LNERQQKLNQHLFRLNRMAEEFNVAVFMTNQVQS 292
>gi|298715571|emb|CBJ28124.1| rad51 homolog C [Ectocarpus siliculosus]
Length = 344
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 48 EKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------GVLYICTES 101
+ D ++ GG+ G +TE+ G G GKTQ +Q+ + +Q+ PH+ G LYI TE
Sbjct: 44 REIDGMMGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQI--PHQFGGVGGGALYIDTEG 101
Query: 102 VFPTARLAQLCE-----LSPLAKPK------------CSDKIFIT--HCYEFIDLKRTLE 142
RL+QLC L +A+ K + + F+ H + D L
Sbjct: 102 SLTVERLSQLCSAVVEHLQKIARNKRKQGVPDLESAVPTQEAFLGGIHVWRLHDHAEQLA 161
Query: 143 SQSGFIE-----NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIV 197
+ E +V ++V+DS+A FR+ + +D V R + +A L+E++ H +
Sbjct: 162 AVRTLPEFLVAHPEVKLVVMDSVAFHFRHAF-QDMSV-RTRMLSRMAQQLNEVAQAHSLA 219
Query: 198 VICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDL 231
V+ NQ+T+ + + +PALG ++ A R L
Sbjct: 220 VVLVNQMTTKVMTGHRGESSLVPALGESWAHAATNRLL 257
>gi|409194654|gb|AFV31617.1| Dmc1 [Acanthopagrus schlegelii]
Length = 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 6 QMLKLGFQ-EWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
+ML +GFQ +E + K+K+ F + +TGS++FD +L GGI + IT
Sbjct: 81 KMLNVGFQTAFEYSA----KRKQVFHI------------TTGSQEFDKLLGGGIESMAIT 124
Query: 65 ELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKP 120
E G GKTQL +C++ Q+ + G V++I TE+ F RL + + +
Sbjct: 125 EAFGEFRTGKTQLSHTLCVTAQLPGEDGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHD 184
Query: 121 KCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 185 AVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGEL 241
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 242 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|440797025|gb|ELR18120.1| DNA repair protein XRCC3, putative [Acanthamoeba castellanii str.
Neff]
Length = 403
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ----VSQPHKGVLYICTES 101
G D L GG+ ITE++G +G GKTQLCLQ+ L +Q G +YI TE
Sbjct: 112 GCPLLDQCLGGGLLPRHITEIAGEAGSGKTQLCLQLALQVQLPPEEGGLGGGAIYIGTEG 171
Query: 102 VFPTARLAQLCE---------LSPLAKP-KCSDKIFITHCYEFIDLKRTLESQSGFI--E 149
FP RL QL E P K D I+I H L ++ Q + +
Sbjct: 172 NFPQRRLDQLHEAFRHKHAHVFPPRRKGFDLRDNIYIKHVGSIDQLFHSMLKQVPPLVQQ 231
Query: 150 NKVGMIVIDSIAGIFRNTYAE--DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V ++++DSIA + R Y + V+R+ + A+ L +++ + ++VV+ NQV+
Sbjct: 232 RNVRLVIVDSIAALLRYEYGSGTSQMVERSRVLFSQANQLKQIADQLQVVVVVINQVSDY 291
Query: 208 M-----------THSDKNIPALGLTY 222
+ H + +PALGL +
Sbjct: 292 VDDSRLVLSDFAAHKKRVVPALGLAW 317
>gi|126339552|ref|XP_001367929.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Monodelphis domestica]
Length = 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V V+TGS++FD +L GGI + ITE
Sbjct: 66 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHVTTGSQEFDKLLGGGIESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGTGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHNA 185
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGVFK----LLIIDSIMALFRVDFSGRGEL 241
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 242 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 274
>gi|296811726|ref|XP_002846201.1| meiotic recombination protein dmc1 [Arthroderma otae CBS 113480]
gi|238843589|gb|EEQ33251.1| meiotic recombination protein dmc1 [Arthroderma otae CBS 113480]
Length = 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 59 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDSILGG 116
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G YI TE F R+AQ+
Sbjct: 117 GFQSMSISEVYGEFRCGKTQLSHTMSVIAQLPKDMGGAEGKAAYIDTEGTFRPERIAQIA 176
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 177 ERFGVDPDSALENIAYARALNSEHQLELLNTLAKE--FASGEYRLLIIDSIMNCFRVDYC 234
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 235 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 272
>gi|28375587|emb|CAD66573.1| unnamed protein product [Homo sapiens]
Length = 394
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 66 VSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 125
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT-- 129
Q C+ M + + G V+YI TES F RL ++ E +K+ +T
Sbjct: 126 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSS 185
Query: 130 --HCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDM 180
H Y + L+R + I + ++++DS+A + R + + +R +
Sbjct: 186 KVHLYRELTCDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFL 245
Query: 181 RDLAHYLHELSIKHRIVVICTNQVTSAMT 209
A L L+ + I VI TNQ+T+ ++
Sbjct: 246 AREASSLKYLAEEFSIPVILTNQITTHLS 274
>gi|10835029|ref|NP_002868.1| DNA repair protein RAD51 homolog 2 isoform 1 [Homo sapiens]
gi|397507279|ref|XP_003824129.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Pan paniscus]
gi|2262209|gb|AAB63358.1| RecA-like protein [Homo sapiens]
gi|2801405|gb|AAC39723.1| DNA repair protein RAD51B [Homo sapiens]
gi|49168604|emb|CAG38797.1| RAD51L1 [Homo sapiens]
gi|60819388|gb|AAX36498.1| RAD51-like 1 [synthetic construct]
gi|61363118|gb|AAX42338.1| RAD51-like 1 [synthetic construct]
gi|119601363|gb|EAW80957.1| RAD51-like 1 (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|119601364|gb|EAW80958.1| RAD51-like 1 (S. cerevisiae), isoform CRA_a [Homo sapiens]
gi|410221126|gb|JAA07782.1| RAD51-like 1 [Pan troglodytes]
gi|410247166|gb|JAA11550.1| RAD51-like 1 [Pan troglodytes]
gi|410296250|gb|JAA26725.1| RAD51-like 1 [Pan troglodytes]
gi|410335225|gb|JAA36559.1| RAD51-like 1 [Pan troglodytes]
Length = 350
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 24 KKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
K + A+ + + D + +ST D L GG+ G +TE++G GCGKTQ C+ M
Sbjct: 63 KMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 83 LSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-------- 130
+ + G V+YI TES F RL ++ E +K+ +T
Sbjct: 123 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRE 182
Query: 131 --CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAH 185
C E + +LE + I + ++++DS+A + R + + +R + A
Sbjct: 183 LTCDEVLQRIESLEEE--IISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREAS 240
Query: 186 YLHELSIKHRIVVICTNQVTSAMT 209
L L+ + I VI TNQ+T+ ++
Sbjct: 241 SLKYLAEEFSIPVILTNQITTHLS 264
>gi|19924117|ref|NP_598194.1| DNA repair protein RAD51 homolog 2 isoform 2 [Homo sapiens]
gi|3005963|emb|CAA75680.1| R51H2 [Homo sapiens]
gi|73808274|gb|AAZ85144.1| RAD51-like 1 (S. cerevisiae) [Homo sapiens]
Length = 350
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH----------CYEFIDLKRTLE 142
V+YI TES F RL ++ E +K+ +T C E + +LE
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 143 SQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ I + ++++DS+A + R + + +R + A L L+ + I VI
Sbjct: 197 EE--IISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVI 254
Query: 200 CTNQVTSAMT 209
TNQ+T+ ++
Sbjct: 255 LTNQITTHLS 264
>gi|114653601|ref|XP_001138758.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 2 [Pan
troglodytes]
Length = 350
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH----------CYEFIDLKRTLE 142
V+YI TES F RL ++ E +K+ +T C E + +LE
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 143 SQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ I + ++++DS+A + R + + +R + A L L+ + I VI
Sbjct: 197 EE--IISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVI 254
Query: 200 CTNQVTSAMT 209
TNQ+T+ ++
Sbjct: 255 LTNQITTHLS 264
>gi|60830799|gb|AAX36945.1| RAD51-like 1 [synthetic construct]
Length = 351
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 24 KKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
K + A+ + + D + +ST D L GG+ G +TE++G GCGKTQ C+ M
Sbjct: 63 KMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 83 LSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-------- 130
+ + G V+YI TES F RL ++ E +K+ +T
Sbjct: 123 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRE 182
Query: 131 --CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAH 185
C E + +LE + I + ++++DS+A + R + + +R + A
Sbjct: 183 LTCDEVLQRIESLEEE--IISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREAS 240
Query: 186 YLHELSIKHRIVVICTNQVTSAMT 209
L L+ + I VI TNQ+T+ ++
Sbjct: 241 SLKYLAEEFSIPVILTNQITTHLS 264
>gi|114653599|ref|XP_001138853.1| PREDICTED: DNA repair protein RAD51 homolog 2 isoform 3 [Pan
troglodytes]
Length = 346
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 24 KKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
K + A+ + + D + +ST D L GG+ G +TE++G GCGKTQ C+ M
Sbjct: 63 KMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMS 122
Query: 83 LSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-------- 130
+ + G V+YI TES F RL ++ E +K+ +T
Sbjct: 123 ILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRE 182
Query: 131 --CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAH 185
C E + +LE + I + ++++DS+A + R + + +R + A
Sbjct: 183 LTCDEVLQRIESLEEE--IISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREAS 240
Query: 186 YLHELSIKHRIVVICTNQVTS 206
L L+ + I VI TNQ+T+
Sbjct: 241 SLKYLAEEFSIPVILTNQITT 261
>gi|28193230|emb|CAD62357.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+ + + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 65 VSRACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 124
Query: 76 QLCLQMC----LSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH- 130
Q C+ M L + V+YI TES F RL ++ E +K+ +T
Sbjct: 125 QFCIMMSILATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSS 184
Query: 131 ---------CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAH 178
C E + +LE + I + ++++DS+A + R + + +R
Sbjct: 185 KVHLYRELTCDEVLQRIESLEEE--IISKGIKLVILDSVASVVRKEFDAQLQGNLKERNK 242
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTSAMT 209
+ A L L+ + I VI TNQ+T+ ++
Sbjct: 243 FLAREASSLKYLAEEFSIPVILTNQITTHLS 273
>gi|330833876|ref|YP_004408604.1| DNA repair and recombination protein RadA [Metallosphaera cuprina
Ar-4]
gi|329566015|gb|AEB94120.1| DNA repair and recombination protein RadA [Metallosphaera cuprina
Ar-4]
Length = 324
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A ++ + + +I +TGS+ D +L GGI +TEL G G GKT
Sbjct: 64 EARDALDIRFKTALEIEQERASVKKI--TTGSQALDGLLGGGIETRTMTELFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHC 131
Q+C Q+ +++Q+ G+ LYI TE F T R+ + L + I
Sbjct: 122 QICHQVSVNVQLPSEKGGLSGKALYIDTEGTFRTERIKAMASALGLDPKEVLQNIMSIRA 181
Query: 132 YEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLH 188
+E I +N + ++V+DSI FR Y+ + R + H L
Sbjct: 182 INTDHQIAIVEELQDIISKDNTIKLVVVDSITSHFRAEYSGRENLAVRQQKLNRHLHQLV 241
Query: 189 ELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
L+ + + VI TNQV + M + D + G T
Sbjct: 242 RLAEIYDLAVIVTNQVMARPDMFYGDPTVAVGGHT 276
>gi|354610563|ref|ZP_09028519.1| DNA repair and recombination protein radB [Halobacterium sp. DL1]
gi|353195383|gb|EHB60885.1| DNA repair and recombination protein radB [Halobacterium sp. DL1]
Length = 231
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
VSTG + D +L GGI G +T++ GA G GKT + L ++ V+ +YI TE
Sbjct: 7 VSTGCDPLDDLLGGGIERGTVTQVYGAPGAGKTNVAL--STAVDVAAEGGTAVYIDTEG- 63
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
R Q+ + S +I ++ ++F + ++ + F E + +IV+DS G
Sbjct: 64 LSVERFDQVLS-ARTDDEDASARIVLSAVHDFEEQAEAVKDAADFAE-RADLIVLDSATG 121
Query: 163 IFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-TSAMTHSDKNIPALGLT 221
+R +D + + + +L L+ KH + VI TNQV T + SD+ P G T
Sbjct: 122 FYRLERDDDDHGEALRQVASQVTHLLSLARKHDLAVIITNQVFTDVESDSDRVRPLGGHT 181
>gi|224050703|ref|XP_002196004.1| PREDICTED: DNA repair protein RAD51 homolog 1 [Taeniopygia guttata]
Length = 339
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITEL G GKTQLC + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|327280164|ref|XP_003224823.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Anolis
carolinensis]
Length = 339
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|298713772|emb|CBJ27144.1| DNA repair and recombination protein Rad51A [Ectocarpus
siliculosus]
Length = 343
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G +TE+ G GKTQLC +C++ Q+ G +Y
Sbjct: 105 ITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLDAGGGEGKAMY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L + + + L+ S + E++ ++
Sbjct: 165 IDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALL 224
Query: 156 VIDSIAGIFRNTYA-----EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDS ++R Y ++ +Q A +R L E + V+ TNQV +
Sbjct: 225 VIDSATALYRTDYCGRGELSERQMQLAQFLRQLTRMAEEFG----VAVVLTNQVVA 276
>gi|397779635|ref|YP_006544108.1| DNA repair and recombination protein radA [Methanoculleus
bourgensis MS2]
gi|396938137|emb|CCJ35392.1| DNA repair and recombination protein radA [Methanoculleus
bourgensis MS2]
Length = 324
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 30/217 (13%)
Query: 28 AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
F+ G++ +D + V + T +FD ++ GG+ ITE+ G G GK+QL QM +++
Sbjct: 65 GFKTGRDILDKRKDVKKLKTLVPEFDELVGGGLETQAITEVYGEFGSGKSQLVHQMAVNV 124
Query: 86 QVSQP----HKGVLYICTESVFPTARLAQLCELSP----------------LAKPKCSDK 125
Q+ + H V+Y+ TE+ F R+ Q+ P +A+ SD
Sbjct: 125 QLPEESGGLHGSVIYVDTENTFRPERIEQMVNGLPEDVDLGELEEILERIHVARAHSSD- 183
Query: 126 IFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLA 184
H +D R L + E V + VIDS+ +FR+ YA R +
Sbjct: 184 ----HQMLLLDTARELANDLRNSEYPVRLFVIDSLTSLFRSEYAGRGTLAARQQKLNRHM 239
Query: 185 HYLHELSIKHRIVVICTNQVTS--AMTHSDKNIPALG 219
H L +L H V + TNQV S A+ D P G
Sbjct: 240 HDLLKLIDDHNAVGLVTNQVMSNPAVLFGDPTKPIGG 276
>gi|1321636|dbj|BAA10970.1| DMC1 homologue [Homo sapiens]
Length = 340
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|49259489|pdb|1V5W|A Chain A, Crystal Structure Of The Human Dmc1 Protein
gi|49259490|pdb|1V5W|B Chain B, Crystal Structure Of The Human Dmc1 Protein
Length = 343
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 67 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 126
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 127 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 186
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 187 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 242
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 243 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 275
>gi|300797883|ref|NP_001180066.1| DNA repair protein RAD51 homolog 2 [Bos taurus]
gi|296483014|tpg|DAA25129.1| TPA: RAD51-like 1 isoform 1 [Bos taurus]
Length = 364
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 15/179 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 97 LSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYID 156
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y + L+R + I
Sbjct: 157 TESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISK 216
Query: 151 KVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V +++IDS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 217 GVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITT 275
>gi|344240520|gb|EGV96623.1| Protein phosphatase 1E [Cricetulus griseus]
Length = 880
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTAR---LAQLC------------------ELSPLAKPKCSDKIFITHCYE 133
++I TE F R LA C L I+ C++
Sbjct: 147 VFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTLENILSHIYYFRCHD 206
Query: 134 FIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ N KV +++ID IA FR+ D R + LA + L+
Sbjct: 207 YTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDL--DDLSLRTRLLNGLAQQMISLA 264
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDL-AHYL 235
HR+ VI TNQ+T+ + DKN +PAL DL AHY+
Sbjct: 265 NNHRLAVILTNQMTTKI---DKNQALLVPALARATSDEVLQSDLSAHYI 310
>gi|353236570|emb|CCA68562.1| related to DNA repair protein RAD51 [Piriformospora indica DSM
11827]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 6/173 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 96 VCITTGSKQLDTLLGGGIETGSITELFGEFRTGKSQICHTLAVTCQLPTSMGGGEGKCLY 155
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L + D + Y ++ L + S + E++ ++
Sbjct: 156 IDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQQQLLVTASALMAESRFALL 215
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
++DS ++R + + R + L L+ ++ I V+ TNQV S+
Sbjct: 216 IVDSCTALYRTDFNGRGELSARQGHLGKFLRTLLRLADEYGIAVVVTNQVMSS 268
>gi|223477408|ref|YP_002581811.1| DNA repair and recombination protein RadA [Thermococcus sp. AM4]
gi|214032634|gb|EEB73463.1| DNA repair and recombination protein RadA [Thermococcus sp. AM4]
Length = 352
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
+STGS+ D +L GGI ITE+ G G GKTQL + + +Q P +G V++I
Sbjct: 116 ISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQ-KPPEEGGLGGSVIWI 174
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE------FIDLKRTLESQSGFIENK 151
TE+ F R+ Q+ E L + I++ + ++ + + +
Sbjct: 175 DTENTFRPERIRQIAEARGLDPDETLKNIYVARAFNSNHQMLLVEKAEEIIKEKATTDRP 234
Query: 152 VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V ++V+DS+ FR+ Y +R + LH L+ + I V TNQV +
Sbjct: 235 VKLLVVDSLMAHFRSEYVGRGSLAERQQKLAKHLADLHRLADLYDIAVFVTNQVQA 290
>gi|332796456|ref|YP_004457956.1| DNA repair and recombination protein RadA [Acidianus hospitalis W1]
gi|332694191|gb|AEE93658.1| DNA repair and recombination protein RadA [Acidianus hospitalis W1]
Length = 305
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 13/216 (6%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A +V K +++ +I +T S+ D +L GGI +TE G G GKT
Sbjct: 45 EARDALDIRFKTALEVKKERMNVRKI--TTSSQALDGLLGGGIETRTMTEFFGEFGSGKT 102
Query: 76 QLCLQMCLSLQVSQPHKGVL-----YICTESVFPTARLAQLCELSPLAKPKCSDKIFITH 130
Q+C Q+ +++Q+ P KG L YI TE F R+ + + + L D I+
Sbjct: 103 QICHQISVNVQLP-PEKGGLSGKAVYIDTEGTFRWERIEAMAKAAGLDPDTAMDNIYYMR 161
Query: 131 CYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYL 187
+ FI V ++++DS+ FR Y + R + H L
Sbjct: 162 AINSDHQIAIGDDLQEFIAKNPSVKVVIVDSVTSHFRAEYTGRENLAARQQKLNKHLHQL 221
Query: 188 HELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
L+ + + VI TNQV + M + D + G T
Sbjct: 222 TRLAEIYDLAVIITNQVMARPDMFYGDPTVAVGGHT 257
>gi|331242297|ref|XP_003333795.1| hypothetical protein PGTG_15555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312785|gb|EFP89376.1| hypothetical protein PGTG_15555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 514
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 61/211 (28%)
Query: 43 VSTGSEKFDSIL---KGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------G 93
++ GS D + +GGI G +TE++G S CGKT CL + LSL V PH G
Sbjct: 93 ITLGSADLDRVFGSPQGGIPTGLLTEIAGESACGKT--CLALQLSLNVQLPHSLGGLLGG 150
Query: 94 VLYICTESVFPTARL----AQLC--------ELSPLAKPKCSDKIFITHCYEFIDLKRTL 141
+Y+CTES FPT RL A LC L P + + + E + L R
Sbjct: 151 CIYLCTESAFPTRRLHEMAAGLCARVKNILDSLDPETQELILQDLRVESLMENVHLTRVH 210
Query: 142 ESQS----------GFI----ENKVG------MIVIDSIAGIFR----------NTYAED 171
+ Q+ GF+ E+K G +IV+DSI IFR T A++
Sbjct: 211 DPQALIHTIHYYLPGFLGRQNESKGGSQRPIRLIVLDSIGAIFRTDLDPSRMSTTTMAKE 270
Query: 172 --------KYVQRAHDMRDLAHYLHELSIKH 194
+ +RA +M +A L EL ++
Sbjct: 271 HSQNNAKFRMTERAAEMNQVADGLKELGARY 301
>gi|67517739|ref|XP_658655.1| hypothetical protein AN1051.2 [Aspergillus nidulans FGSC A4]
gi|40747013|gb|EAA66169.1| hypothetical protein AN1051.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 15/197 (7%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D++L GGI G +TE++G SG GKTQ L + L++Q+ P + +YI
Sbjct: 442 TISTLDAALDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGAGRSAIYIS 501
Query: 99 TESVFPTARLAQLCE----LSPLAKPKCSD--KIFITHCYEFIDLKRTLESQ--SGFIEN 150
TE+ T RL+QL E LS L++ + +I + + L Q
Sbjct: 502 TEAPLATNRLSQLIECHPYLSTLSREQAPSLGRILSINAMDLESQDHILNYQLPVAIKRY 561
Query: 151 KVGMIVIDSIAGIFRNTYAE---DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
VG++VIDSI +R + R+ ++ L L L+ + ++ NQV+
Sbjct: 562 NVGLVVIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVAIVVANQVSDR 621
Query: 208 MTHSDKNIPALGLTYER 224
D +P +T +R
Sbjct: 622 F-EGDAPLPFSRVTGDR 637
>gi|240102188|ref|YP_002958496.1| DNA repair and recombination protein RadA [Thermococcus
gammatolerans EJ3]
gi|239909741|gb|ACS32632.1| DNA repair and recombination protein RadA (radA) [Thermococcus
gammatolerans EJ3]
Length = 355
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
+STGS+ D +L GGI ITE+ G G GKTQL + + +Q P +G V++I
Sbjct: 119 ISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQ-KPPEEGGLGGSVIWI 177
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE------FIDLKRTLESQSGFIENK 151
TE+ F R+ Q+ E L + I++ + ++ + + +
Sbjct: 178 DTENTFRPERIRQIAEARGLDPDEVLKNIYVARAFNSNHQMLLVEKAEEIIKEKASTDRP 237
Query: 152 VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V ++V+DS+ FR+ Y +R + LH L+ + I V TNQV +
Sbjct: 238 VKLLVVDSLMAHFRSEYVGRGSLAERQQKLAKHLADLHRLADLYDIAVFVTNQVQA 293
>gi|156097941|ref|XP_001615003.1| meiotic recombination protein DMC1-like protein [Plasmodium vivax
Sal-1]
gi|148803877|gb|EDL45276.1| meiotic recombination protein DMC1-like protein, putative
[Plasmodium vivax]
Length = 347
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS D L GGI + ITEL G + CGKTQ+C + +S Q+ + G V YI
Sbjct: 110 ITTGSSTLDKTLGGGIESMSITELFGENRCGKTQICHTLAVSAQLPRSVGGGNGKVCYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVI 157
TE F ++ ++ E + D I + L + L S + E ++V+
Sbjct: 170 TEGTFRPEKICKIAERYGIDGEDVLDNILYARAFTHEHLYQLLAVSAAKMCEEPFALLVV 229
Query: 158 DSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI +FR ++ + +R + L +L + I V+ TNQV S
Sbjct: 230 DSIISLFRVDFSGRGELSERQQKLNKTMSILSKLGEQFNIAVLITNQVMS 279
>gi|326919838|ref|XP_003206184.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Meleagris
gallopavo]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITEL G GKTQLC + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|196049702|pdb|2ZJB|A Chain A, Crystal Structure Of The Human Dmc1-M200v Polymorphic
Variant
gi|196049703|pdb|2ZJB|B Chain B, Crystal Structure Of The Human Dmc1-M200v Polymorphic
Variant
Length = 343
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 67 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 126
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 127 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 186
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 187 VLDNVLYARAYTSEHQVELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 242
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 243 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 275
>gi|242824534|ref|XP_002488278.1| meiotic recombination protein (Dmc1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218713199|gb|EED12624.1| meiotic recombination protein (Dmc1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 337
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 7 MLKL-GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIV--------VSTGSEKFDSILKGG 57
+LK+ GF E +V K+K+ +K I E+ +STGS++FD+IL GG
Sbjct: 54 LLKIKGFSEIKVEKIKE-AIQKCLPTANGFITAMELCHQRKKVFKISTGSKQFDAILGGG 112
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+ I+E+ G CGKTQL M + Q+ + G V Y+ TE F R+AQ+ E
Sbjct: 113 FSSMSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYMDTEGTFRPERIAQIAE 172
Query: 114 LSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA- 169
L + I ++L TL + F + ++VIDSI FR ++
Sbjct: 173 RYGLDAESTQENISYARALNSEHQLELLNTLSKE--FAGGQYRLLVIDSIMNCFRVDFSG 230
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + L L+ + + V+ TNQV S
Sbjct: 231 RGELAERQQKLNQFLIRLSHLAEEFNVCVLMTNQVQS 267
>gi|114686387|ref|XP_515130.2| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Pan
troglodytes]
gi|410348666|gb|JAA40937.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Pan troglodytes]
gi|410348668|gb|JAA40938.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Pan troglodytes]
gi|410348670|gb|JAA40939.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Pan troglodytes]
Length = 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|426233576|ref|XP_004010792.1| PREDICTED: DNA repair protein RAD51 homolog 2 [Ovis aries]
Length = 350
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 83 LSTTLPALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y + L+R + I
Sbjct: 143 TESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V +++IDS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 203 GVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITTH 262
Query: 208 MT 209
++
Sbjct: 263 LS 264
>gi|54696276|gb|AAV38510.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [synthetic
construct]
Length = 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDQGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|401828066|ref|XP_003888325.1| DNA repair protein Rad51 [Encephalitozoon hellem ATCC 50504]
gi|392999597|gb|AFM99344.1| DNA repair protein Rad51 [Encephalitozoon hellem ATCC 50504]
gi|396082442|gb|AFN84051.1| DNA repair protein Rad51 [Encephalitozoon romaleae SJ-2008]
Length = 334
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D +L GG +G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 94 VYLTTGSSEVDKLLNGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMY 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F + RL + E L + D I Y + L S + E+K ++
Sbjct: 154 IDTEGTFRSERLVPIAERFGLDPNEVMDNISYARAYNSDHQSQLLIKASAMMSESKYSVL 213
Query: 156 VIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHE---LSIKHRIVVICTNQVTS 206
+IDS ++R ++ + LA YL L+ R+ VI TNQV S
Sbjct: 214 IIDSATALYRTDFSGRG--ELGARQLHLAKYLRSLVNLAETFRVAVIITNQVVS 265
>gi|255722349|ref|XP_002546109.1| DNA repair protein RAD51 [Candida tropicalis MYA-3404]
gi|240136598|gb|EER36151.1| DNA repair protein RAD51 [Candida tropicalis MYA-3404]
Length = 364
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 120 ICLTTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 179
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L C D + Y L + + E++ ++
Sbjct: 180 IDTEGTFRPNRLISIAERYGLNANDCLDNVAYARAYNAEHQLNLLNIAAQMMAESRFSLL 239
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R YA + R + L L+ + I V+ TNQV +
Sbjct: 240 IVDSIMSLYRTDYAGRGELSARQTHVARFMRTLQRLADEFGIAVVITNQVVA 291
>gi|23238219|ref|NP_008999.2| meiotic recombination protein DMC1/LIM15 homolog [Homo sapiens]
gi|109094191|ref|XP_001094012.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Macaca
mulatta]
gi|397501959|ref|XP_003821641.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Pan
paniscus]
gi|13878923|sp|Q14565.2|DMC1_HUMAN RecName: Full=Meiotic recombination protein DMC1/LIM15 homolog
gi|40786809|gb|AAR89915.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|47678503|emb|CAG30372.1| DMC1 [Homo sapiens]
gi|109451232|emb|CAK54477.1| DMC1 [synthetic construct]
gi|109451810|emb|CAK54776.1| DMC1 [synthetic construct]
gi|115528933|gb|AAI25164.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|115529065|gb|AAI25165.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|119580653|gb|EAW60249.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Homo sapiens]
gi|158258671|dbj|BAF85306.1| unnamed protein product [Homo sapiens]
gi|306921535|dbj|BAJ17847.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [synthetic construct]
Length = 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|45384012|ref|NP_990504.1| DNA repair protein RAD51 homolog 1 [Gallus gallus]
gi|585770|sp|P37383.1|RAD51_CHICK RecName: Full=DNA repair protein RAD51 homolog 1
gi|299819|gb|AAB26354.1| homolog to S.cerevisiae [Gallus gallus]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITEL G GKTQLC + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|1066001|dbj|BAA09932.1| HsLim15 [Homo sapiens]
Length = 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDP 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|291406479|ref|XP_002719601.1| PREDICTED: RAD51-like 1 [Oryctolagus cuniculus]
Length = 344
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
++ + T D L+GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 78 LSPAFLPTSLPALDEALRGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTDMGGLEGA 137
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQS 145
V+YI TES F RL ++ E +K+ +T H Y + ++R +
Sbjct: 138 VVYIDTESAFSAERLIEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDEVMQRIESLEE 197
Query: 146 GFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I V +++IDS+A + R +T + +R + A L ++ + I VI TN
Sbjct: 198 DIISKGVKLVIIDSVASVVRKEFDTQLQGNMKERNKFLAREASLLKYVAEEFSIPVILTN 257
Query: 203 QVTS 206
Q+T+
Sbjct: 258 QITT 261
>gi|358060240|dbj|GAA93994.1| hypothetical protein E5Q_00641 [Mixia osmundae IAM 14324]
Length = 462
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 41/215 (19%)
Query: 37 DMTEIV-----VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH 91
D TE++ ++TG FD++L GGI G +TE+ GA+ GK+Q L++ L Q+
Sbjct: 99 DCTELINRSACIATGDTHFDALLGGGIRVGSLTEVVGAASGGKSQFGLKLALYAQLPSTS 158
Query: 92 K----GVLYICTESVFPTARLAQLC---ELSPLAKPK-CSDKIFITHCYEFIDLKRTLES 143
GV++I +E+ F + RL +L EL P+ D I +TH + L+ +
Sbjct: 159 NIAPGGVIHITSEASFASGRLLELADQLELQGDRSPREFLDNIHLTHLRDMETLEHIVSY 218
Query: 144 QSGFIENK--------------------------VGMIVIDSIAGIFRNTYAEDK--YVQ 175
+ N+ + +++IDS+A R + K +
Sbjct: 219 SVPELINRHANRPSLGHDNDAREAKRQKKGSLLPIRLLIIDSLAAAARTEWDTSKSGMFE 278
Query: 176 RAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
R+ + DL L L+ ++RI V+ NQVT H
Sbjct: 279 RSKSLIDLGEKLRCLAERYRIAVVVINQVTDDFRH 313
>gi|323349503|gb|EGA83727.1| Rad57p [Saccharomyces cerevisiae Lalvin QA23]
Length = 170
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPT 105
D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI TE PT
Sbjct: 1 MDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDLPT 60
Query: 106 ARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVGMIVIDS 159
RL + P + IF C + I+ + + Q + + + +++IDS
Sbjct: 61 QRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIKLVIIDS 120
Query: 160 IA---------GIFRNTYAEDKYVQR-AHDMRDLAHYLHELSIKHRIVVICTNQV 204
I+ FR + Y+ R A ++ LAH + + V+ NQV
Sbjct: 121 ISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH-------DYSLSVVVANQV 168
>gi|60829742|gb|AAX36891.1| RAD51-like [synthetic construct]
gi|61369103|gb|AAX43285.1| RAD51-like [synthetic construct]
Length = 340
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|397827|dbj|BAA02962.1| HsRad51 [Homo sapiens]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|315043933|ref|XP_003171342.1| meiotic recombinase Dmc1 [Arthroderma gypseum CBS 118893]
gi|311343685|gb|EFR02888.1| meiotic recombinase Dmc1 [Arthroderma gypseum CBS 118893]
Length = 337
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDSILGG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVIAQLPKDMGGAEGKAAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENIAYARALNSEHQLELLNTLAKE--FASGEYRLLIIDSIMNCFRVDYC 229
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|19924133|ref|NP_002866.2| DNA repair protein RAD51 homolog 1 isoform 1 [Homo sapiens]
gi|114656377|ref|XP_001144621.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 3 [Pan
troglodytes]
gi|297696332|ref|XP_002825350.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Pongo
abelii]
gi|332235183|ref|XP_003266786.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Nomascus
leucogenys]
gi|397512609|ref|XP_003826633.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Pan
paniscus]
gi|397512613|ref|XP_003826635.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 3 [Pan
paniscus]
gi|402873987|ref|XP_003900829.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Papio
anubis]
gi|548663|sp|Q06609.1|RAD51_HUMAN RecName: Full=DNA repair protein RAD51 homolog 1; Short=HsRAD51;
Short=hRAD51; AltName: Full=RAD51 homolog A
gi|285977|dbj|BAA03189.1| RAD51 [Homo sapiens]
gi|5733658|gb|AAD49705.1| Rad51 [Homo sapiens]
gi|7767554|gb|AAF69145.1| RAD51 [Homo sapiens]
gi|27368250|gb|AAN87149.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Homo
sapiens]
gi|49168602|emb|CAG38796.1| RAD51 [Homo sapiens]
gi|60817856|gb|AAX36441.1| RAD51-like [synthetic construct]
gi|61358913|gb|AAX41640.1| RAD51-like [synthetic construct]
gi|119612840|gb|EAW92434.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae), isoform
CRA_d [Homo sapiens]
gi|189069251|dbj|BAG36283.1| unnamed protein product [Homo sapiens]
gi|261860564|dbj|BAI46804.1| RAD51 homolog [synthetic construct]
gi|355692613|gb|EHH27216.1| hypothetical protein EGK_17369 [Macaca mulatta]
gi|383414637|gb|AFH30532.1| DNA repair protein RAD51 homolog 1 isoform 1 [Macaca mulatta]
gi|387540962|gb|AFJ71108.1| DNA repair protein RAD51 homolog 1 isoform 1 [Macaca mulatta]
gi|410225338|gb|JAA09888.1| RAD51 homolog [Pan troglodytes]
gi|410262156|gb|JAA19044.1| RAD51 homolog [Pan troglodytes]
gi|410290586|gb|JAA23893.1| RAD51 homolog [Pan troglodytes]
gi|410329095|gb|JAA33494.1| RAD51 homolog [Pan troglodytes]
Length = 339
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|410895827|ref|XP_003961401.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Takifugu rubripes]
Length = 342
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 22/192 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS+ FD +L GGI + ITE G GKTQL +C++ Q+ + G V++I
Sbjct: 103 ITTGSQDFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTSQLPGDDGYSGGKVIFID 162
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENKV 152
TE+ F RL + + + + D + Y E +D + G +
Sbjct: 163 TENTFRPDRLRDIADKFNVDQDAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---F 219
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++VIDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 220 KLLVIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFITNQMTAD---- 275
Query: 212 DKNIPALGLTYE 223
P G+T++
Sbjct: 276 ----PGAGMTFQ 283
>gi|294948363|ref|XP_002785713.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
gi|239899761|gb|EER17509.1| meiotic recombination protein DMC1, putative [Perkinsus marinus
ATCC 50983]
Length = 259
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
VSTG D+ L+GG+ + EL G +G GKTQ+ + + +++ + V + +E
Sbjct: 14 VSTGMPSLDAFLRGGLPVAQLVELYGPAGSGKTQVLMSIAVAVLAGEGR--VFWFDSERT 71
Query: 103 FPTARLAQLCELSPLAKP--KCSDKIFITHCYEFIDLKRTLESQSGF--IENKVGMIVID 158
R LCE P ++ I C + +DL R +E+ E ++VID
Sbjct: 72 LHPERFQSLCERRSPHAPIEGMLSRMAIKECDDLLDLIRGVEALKTIPTCEGVPCLVVID 131
Query: 159 SIAGIFRNT-------------YAEDKYV--QRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
S+A R T D V +R + LA L + R V+ +N
Sbjct: 132 SVAAAARCTEDIILSRMQGDKSEGSDAAVLAERQSLLNRLAVALKGAAWVQRAAVVVSNH 191
Query: 204 VTSAM--THSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSA 255
VT+ SD PALGLT+ A ++R + + + E S + ++ Q++S+
Sbjct: 192 VTADFDSNQSDAFKPALGLTWSHAVNVRLMINRVEESSQREIVLTKSAQQMSSS 245
>gi|327400087|ref|YP_004340926.1| DNA repair and recombination protein radA [Archaeoglobus veneficus
SNP6]
gi|327315595|gb|AEA46211.1| DNA repair and recombination protein radA [Archaeoglobus veneficus
SNP6]
Length = 328
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS+ D +L GG+ ITEL G G GKTQ+C Q+ +++Q+ + G V+ I
Sbjct: 91 ITTGSKALDELLGGGVETQSITELFGEFGSGKTQICHQLAVNVQLPRDLGGLEGSVIVID 150
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE------FIDLKRTLESQSGFIENKV 152
TE+ F R+ Q+ E L + I++ Y +D + L ++ +V
Sbjct: 151 TENTFRPERIIQMAEAKGLDPEEVLRNIYVAQAYNSNHQMLLVDNAKELANKLKKEGKQV 210
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRI---VVICTNQVTS 206
++++DS+ FR Y + A + L +LH+L I ++ TNQV +
Sbjct: 211 KLLIVDSLMAHFRAEYVGRGTL--ADRQQKLNKHLHDLMRFGEIFNAAIVVTNQVQA 265
>gi|190347494|gb|EDK39771.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 333
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 22/196 (11%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 89 ICVTTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 148
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIEN 150
I TE F RL + + L C D + H ++ +++ + ++S F
Sbjct: 149 IDTEGTFRPVRLVSIAQRYGLNPDDCLDNVAYARAYNAEHQFQLLNMAAQMMAESRF--- 205
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT---- 205
++++DSI ++R Y+ + R + L L+ + I V+ TNQV
Sbjct: 206 --SLLIVDSIMSLYRTDYSGRGELSARQAHVAKYMRTLQRLADEFGIAVVITNQVVAQVD 263
Query: 206 --SAMTHSDKNIPALG 219
++M + D P G
Sbjct: 264 GGASMFNPDPKKPIGG 279
>gi|346975010|gb|EGY18462.1| DNA repair protein RAD51 [Verticillium dahliae VdLs.17]
Length = 354
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 107 ISISTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 166
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L+ S + E + ++
Sbjct: 167 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNSDHQLQLLQQASAMMCETRFSLL 226
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 227 IVDSATALYRTDFVGRGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVVAQVDGGPSA 286
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 287 MFNPDPKKPIGG 298
>gi|1706446|sp|P50265.1|DLH1_CANAL RecName: Full=Meiotic recombination protein DLH1; AltName:
Full=DMC1 homolog
gi|1145716|gb|AAC49400.1| Dlh1p [Candida albicans]
Length = 324
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS++FD IL GGI + ITE+ G CGKTQLC +C++ Q+ G V YI
Sbjct: 87 ITTGSKQFDEILGGGIQSMSITEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYID 146
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMI 155
TE F R+ + E + C + I I+L L ++ E ++
Sbjct: 147 TEGTFRPDRIRSIAERYGVDADICLENISYARALNSEHQIELVEQLGNE--LAEGTFRLL 204
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI FR Y+ + +R + L ++ + I V TNQV S
Sbjct: 205 IVDSIMACFRVDYSGRGELNERQQKLNQHLSNLTRVAEDYNIAVFLTNQVQS 256
>gi|440492453|gb|ELQ75018.1| DNA repair protein RAD51/RHP55 [Trachipleistophora hominis]
Length = 343
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D +LKGGI G ITE+ G GKTQLC + ++ Q+ + + G LY
Sbjct: 103 VFITTGSQELDKLLKGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLDRENGGGSGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R + + L + + I Y + L + + E+ +I
Sbjct: 163 IDTEGTFRPERCIAVAQRFGLDSDQVLENISYARAYNSDHQSQLLVQAAAMLSESNYSLI 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS ++R ++ + R + L L+ + + V+ TNQV +AM
Sbjct: 223 IVDSAMALYRTDFSGRGELGARQIHLARFLRMLLRLADEFSVAVVITNQVVASVDGAAAM 282
Query: 209 THSDKNIPALG 219
++D PA G
Sbjct: 283 FNADPKKPAGG 293
>gi|321471848|gb|EFX82820.1| hypothetical protein DAPPUDRAFT_299714 [Daphnia pulex]
Length = 341
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ V+TGS++ D +L GGI G ITE+ G GKTQLCL + ++ Q+ G LY
Sbjct: 102 VQVTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQLCLTLAVTCQLPIDSGGAEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + +++ ++
Sbjct: 162 IDTEGTFRPERLLAVAERYGLSGSDVLDNVACARAFNTDHQSQLLIQASAMMADSRYALL 221
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 222 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 281
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 282 AADPKKPIGG 291
>gi|68485285|ref|XP_713476.1| hypothetical protein CaO19.11236 [Candida albicans SC5314]
gi|68485358|ref|XP_713440.1| hypothetical protein CaO19.3752 [Candida albicans SC5314]
gi|46434928|gb|EAK94324.1| hypothetical protein CaO19.3752 [Candida albicans SC5314]
gi|46434968|gb|EAK94361.1| hypothetical protein CaO19.11236 [Candida albicans SC5314]
gi|238879694|gb|EEQ43332.1| DNA repair protein RAD51 [Candida albicans WO-1]
Length = 361
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 117 ICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 176
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L C D + Y L + + E++ ++
Sbjct: 177 IDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFSLL 236
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT------SAM 208
++DSI ++R YA + R + L L+ + I V+ TNQV S M
Sbjct: 237 IVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGMSGM 296
Query: 209 THSDKNIPALG 219
+ D P G
Sbjct: 297 FNPDPKKPIGG 307
>gi|302413964|ref|XP_003004814.1| DNA repair protein RAD51 [Verticillium albo-atrum VaMs.102]
gi|261355883|gb|EEY18311.1| DNA repair protein RAD51 [Verticillium albo-atrum VaMs.102]
Length = 355
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 107 ISISTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 166
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L+ S + E + ++
Sbjct: 167 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNSDHQLQLLQQASAMMCETRFSLL 226
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 227 IVDSATALYRTDFVGRGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVVAQVDGGPSA 286
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 287 MFNPDPKKPIGG 298
>gi|303391399|ref|XP_003073929.1| DNA repair protein Rad51 [Encephalitozoon intestinalis ATCC 50506]
gi|303303078|gb|ADM12569.1| DNA repair protein Rad51 [Encephalitozoon intestinalis ATCC 50506]
Length = 334
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D +L GG +G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 94 VYLTTGSSEVDKLLNGGFESGSITEIFGEFRTGKTQLCHTVAVTCQLPPEQGGGGGKAMY 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F + RL + E L + D I Y + L S + E+K ++
Sbjct: 154 IDTEGTFRSERLIPIAERFGLDPDEVMDNISYARAYNSDHQSQLLIKASAMMSESKYSVL 213
Query: 156 VIDSIAGIFRNTYA--EDKYVQRAHDMRDLAHYLHE---LSIKHRIVVICTNQVTS 206
+IDS ++R ++ + ++ H LA YL L+ R+ VI TNQV S
Sbjct: 214 IIDSATALYRTDFSGRGELGARQLH----LAKYLRSLVNLAETFRVAVIITNQVVS 265
>gi|242019042|ref|XP_002429975.1| DNA repair protein rad51, putative [Pediculus humanus corporis]
gi|212515030|gb|EEB17237.1| DNA repair protein rad51, putative [Pediculus humanus corporis]
Length = 339
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+++TGS++ D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 100 ILLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPIDQNGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + Y + L S + E++ ++
Sbjct: 160 IDTEGTFRPERLIAVAERFKLSLSDVLDNVAVARAYNTDHQTQLLLMASAMMSESRYALL 219
Query: 156 VIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVT-----SA 207
+IDS ++R Y+ + A M LA +L L+ + + VI TNQV +
Sbjct: 220 IIDSATALYRTDYSGRGELS-ARQMH-LARFLRMCLRLADEFGVAVILTNQVVAQVDCAT 277
Query: 208 MTHSDKNIPALG 219
M +D P G
Sbjct: 278 MFAADPKKPVGG 289
>gi|291405699|ref|XP_002719136.1| PREDICTED: RAD51 homolog C [Oryctolagus cuniculus]
Length = 473
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQSFIITFCSAVDNILGGGIPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQLC--------------------ELSPLAKPKCSDKIFITHCYEF 134
++I TE F R+ +L L I+ C ++
Sbjct: 147 VFIDTEGSFMVDRVVELATACIQHLHLIAGTHMEEEQKALEEFTLENILSHIYYFRCCDY 206
Query: 135 IDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSI 192
+L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 207 TELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLAN 264
Query: 193 KHRIVVICTNQVTSAMTHSDK-NIPALGLTYERAHDMRDLAHY 234
HR+ VI TNQ+T+ + +PALG ++ A +R + H+
Sbjct: 265 NHRLAVILTNQMTTKIEKDQALLVPALGESWGHAATIRLVFHW 307
>gi|325092525|gb|EGC45835.1| meiotic recombination protein dmc1 [Ajellomyces capsulatus H88]
Length = 381
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 76 LLKIRGFSEVKVEKIKEAIQKCKPSASGFITAMELGHQRKRVVKI--STGSKQFDSILAG 133
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 134 GFQSMSISEVYGEFRCGKTQLSHTMSVMAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 193
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA 169
E + + I ++L TL + F+ + +++IDSI FR Y
Sbjct: 194 ERFGVDPDSALENIAYARALNSEHQLELLNTLSKE--FVGGEYRLLIIDSIMNCFRVDYC 251
Query: 170 -----EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
D+ + + LAH E ++ ++++CT++
Sbjct: 252 GRGELADRQQKLNQFLMKLAHMAEEFNVC--VLMVCTSK 288
>gi|211904093|ref|NP_001129988.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination [Oryzias latipes]
gi|199652322|gb|ACH91672.1| DMC1 [Oryzias latipes]
Length = 342
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ K FQ + V +STGS++FD +L GG+ + ITE
Sbjct: 66 GLSEAKVEKIKEAAGKVLNVGFQTAFEYSSKRKQVFHISTGSQEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + G V++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGENGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHGA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|148223319|ref|NP_001080559.1| DNA repair protein RAD51 homolog B [Xenopus laevis]
gi|2500106|sp|Q91917.1|RA51B_XENLA RecName: Full=DNA repair protein RAD51 homolog B; Short=xRAD51.2
gi|1054622|dbj|BAA07500.1| XRad51.2 [Xenopus laevis]
gi|28302165|gb|AAH46650.1| Rad51 protein [Xenopus laevis]
gi|80477159|gb|AAI08487.1| Rad51 protein [Xenopus laevis]
Length = 336
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I + TGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G +Y
Sbjct: 97 IQIGTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L+ D + + + L S + E++ ++
Sbjct: 157 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALL 216
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 217 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 276
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 277 AADPKKPIGG 286
>gi|50294774|ref|XP_449798.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529112|emb|CAG62776.1| unnamed protein product [Candida glabrata]
Length = 466
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+TG D +L GGI ITE+ G S GK+QL +Q+CLS+Q+ G+ ++I T
Sbjct: 87 TTGDLGIDEVLGGGISTNCITEIFGESSTGKSQLLMQLCLSVQLPISEGGLNAKCVFITT 146
Query: 100 ESVFPTARLAQLCEL-----------SPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
E PT RLA + E S + C D I H + L LE G
Sbjct: 147 EGDLPTNRLAGMIEARKDWHELGISQSNIFTVSCPDLISQEHIVN-VQLPVLLERNKG-- 203
Query: 149 ENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
++ +I+IDSI+ R +T + ++ + ++A L ++ KH + ++ NQV
Sbjct: 204 --EIKLIIIDSISHHLRVELDTKSFKDSLENKAYITEMAEKLQGIATKHSVAIVVANQV 260
>gi|240280982|gb|EER44485.1| meiotic recombination protein [Ajellomyces capsulatus H143]
Length = 381
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 28/219 (12%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 76 LLKIRGFSEVKVEKIKEAIQKCKPSASGFITAMELGHQRKRVVKI--STGSKQFDSILAG 133
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 134 GFQSMSISEVYGEFRCGKTQLSHTMSVMAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 193
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA 169
E + + I ++L TL + F+ + +++IDSI FR Y
Sbjct: 194 ERFGVDPDSALENIAYARALNSEHQLELLNTLSKE--FVGGEYRLLIIDSIMNCFRVDYC 251
Query: 170 -----EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
D+ + + LAH E ++ ++++CT++
Sbjct: 252 GRGELADRQQKLNQFLMKLAHMAEEFNVC--VLMVCTSK 288
>gi|378755179|gb|EHY65206.1| DNA repair protein [Nematocida sp. 1 ERTm2]
Length = 338
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 8 LKLGFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELS 67
++LGFQ ++ K L+ K +++TGS + D +L GGI G ITEL
Sbjct: 80 VELGFQTADIIHQKRLQMK---------------MITTGSSELDKLLGGGIETGSITELF 124
Query: 68 GASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCS 123
G GKTQ+C + ++ Q+ G +YI TES F RL ++ + L
Sbjct: 125 GEFRTGKTQICHMLAVTCQLPTEMGGCNGKAIYIDTESTFRAERLIEIAKRYELDPTDVL 184
Query: 124 DKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDM 180
K+ + Y +D + L +G + + ++++DSI +R ++ + R +
Sbjct: 185 SKVCVARAYN-VDHQLELVKMAGGLMASGEYRLLIVDSIIANYRTDFSGRGELSARQMHL 243
Query: 181 RDLAHYLHELSIKHRIVVICTNQV------TSAMTHSDKNIPALG 219
L +L+ ++ + V+ TNQV +AM D P G
Sbjct: 244 STYLRSLMQLADEYNVAVVITNQVVATVDGAAAMFGGDTKKPTGG 288
>gi|348502397|ref|XP_003438754.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Oreochromis niloticus]
gi|63852084|dbj|BAD98460.1| RecA homolog Dmc1 [Oreochromis niloticus]
Length = 342
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 6 QMLKLGFQ-EWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
+ML +GFQ +E + ++K+ F V +TGS++FD +L GG+ + IT
Sbjct: 81 KMLNVGFQTAFEYSA----RRKQVFHV------------TTGSQEFDKLLGGGVESMAIT 124
Query: 65 ELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKP 120
E G GKTQL +C++ Q+ + G V++I TE+ F RL + + +
Sbjct: 125 EAFGEFRTGKTQLSHTLCVTAQLPGEDGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHD 184
Query: 121 KCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 185 AVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGEL 241
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 242 AERQQKLAQMLSRLQKISEEYNVAVFITNQMTAD--------PGAGMTFQ 283
>gi|395538165|ref|XP_003771055.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Sarcophilus harrisii]
Length = 342
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V V+TGS++FD +L GGI + ITE
Sbjct: 66 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHVTTGSQEFDKLLGGGIESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G V++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQL--PGTGGYTGGKVIFIDTENTFRPDRLRDIADRYNVDH 183
Query: 120 PKCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDK 172
D + Y E +D + G I +++IDSI +FR ++ +
Sbjct: 184 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEGGI---FKLLIIDSIMALFRVDFSGRGE 240
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 241 LAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 274
>gi|403289415|ref|XP_003935854.1| PREDICTED: DNA repair protein RAD51 homolog 1 [Saimiri boliviensis
boliviensis]
Length = 324
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 85 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 144
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 145 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 204
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 205 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 264
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 265 AADPKKPIGG 274
>gi|332231229|ref|XP_003264800.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Nomascus leucogenys]
Length = 340
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDS+ +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSVMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|440897351|gb|ELR49062.1| DNA repair protein RAD51-like protein 2, partial [Bos grunniens
mutus]
Length = 373
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 83 LSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y + L+R + I
Sbjct: 143 TESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V +++IDS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 203 GVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITTH 262
Query: 208 MT 209
++
Sbjct: 263 LS 264
>gi|241950183|ref|XP_002417814.1| DNA double-strand-break repair and homologue-pairing meiosis
protein (DMC1/RAD51 homologue), putative [Candida
dubliniensis CD36]
gi|223641152|emb|CAX45529.1| DNA double-strand-break repair and homologue-pairing meiosis
protein (DMC1/RAD51 homologue), putative [Candida
dubliniensis CD36]
Length = 324
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 11 GFQEWEVNKVKDLK---KKKAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ KK F ++ V ++TGS +FD IL GGI + ITE
Sbjct: 50 GLSEIKVEKIKEAAGKIKKCGFIPATIVAELRTKVFHITTGSRQFDEILGGGIQSMSITE 109
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G CGKTQLC +C++ Q+ G V YI TE F R+ + E +
Sbjct: 110 VFGEFRCGKTQLCHTLCIAAQLPTDMGGGEGRVAYIDTEGTFRPDRIRSIAERYDVDADT 169
Query: 122 CSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRA 177
C + I I+L L ++ E ++++DSI FR ++ + +R
Sbjct: 170 CLENISYARALNSEHQIELVEQLGNE--LAEGTFRLLIVDSIMACFRVDFSGRGELNERQ 227
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + I V TNQV S
Sbjct: 228 QKLNQHLSNLTRVAEDYNIAVFLTNQVQS 256
>gi|357135308|ref|XP_003569252.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Brachypodium
distachyon]
Length = 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS +SIL GGIH +TE+ G G GKTQL +Q+ +++Q+ + G+ +YI
Sbjct: 50 ITTGSGDLNSILGGGIHCKEVTEIGGVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYID 109
Query: 99 TESVFPTARLAQLC--------ELSPLAKPKCSD-------KIFITHCYEF--------I 135
TE F R+ Q+ E P K S + F+ Y F I
Sbjct: 110 TEGSFMVERVYQIAEGCISDIMEYFPYRHDKASSGREHLQPERFLADIYYFRVCSYTEQI 169
Query: 136 DLKRTLESQSGFIENK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKH 194
+ LE G E+K V +I+IDS+ FR + D R + L+ L +LS +
Sbjct: 170 AVINYLEKFLG--EHKDVRIIIIDSVTFHFRQDF--DDLALRTRVLSGLSLKLMKLSKTY 225
Query: 195 RIVVICTNQVTSAMTHS 211
+ V+ NQVT+ T
Sbjct: 226 NVAVVLLNQVTTKFTEG 242
>gi|326435196|gb|EGD80766.1| hypothetical protein PTSG_01354 [Salpingoeca sp. ATCC 50818]
Length = 366
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS----QPHKGVLYICTESVFPT 105
D L GG+ G ITE++G SGCGKTQ C+ M V +P GVLY+ TE F
Sbjct: 86 LDRNLAGGLPIGMITEVAGPSGCGKTQFCMMMTSVAAVGVNGHEPG-GVLYLDTEGSFSN 144
Query: 106 ARL-AQLCELSPL------AKPKCSDKIFITHCYEFIDLKRTLES-QSGFIENKVGMIVI 157
RL A + P+ A S +I + +L R LE+ +E K ++++
Sbjct: 145 KRLVAMASQRFPVQLATNEALVDMSKRIQVITTKTSAELLRVLETLDVRIVEMKARLVIL 204
Query: 158 DSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS A + R Y ++ +R R+ A L + + I V+ TNQVT+
Sbjct: 205 DSAASLLRKEYQGNQQERRDVLARE-ATLLKRWAQTYAIPVLVTNQVTT 252
>gi|395509187|ref|XP_003758884.1| PREDICTED: DNA repair protein RAD51 homolog 2-like, partial
[Sarcophilus harrisii]
Length = 253
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D++ ++T D L GG+ G +TE++G SGCGKTQ C+ M + + G
Sbjct: 77 DLSSAFLATTLTSLDEALHGGVPCGSLTEVTGPSGCGKTQFCMMMSVLTTLPTVMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQ 144
V+YI TES F RL ++ E + +K+ H Y+ + LKR +
Sbjct: 137 SVIYIDTESAFSAERLIRIAEFRFPSFFNTGEKLLSMSSKIHLYQELTCNDVLKRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYL 187
I N V +++IDS+A + R + Q +MR+ +++L
Sbjct: 197 EEIISNGVKLLIIDSVASVVRKEFD----TQLQGNMRERSNFL 235
>gi|197092365|gb|ACH42255.1| RAD51D protein [Triticum aestivum]
Length = 246
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+ TG E D++L GG+ G +TE++G S GKTQ+CL + V+ H G VLY+ T +
Sbjct: 14 LPTGLEGIDTLLGGGLRKGQLTEITGQSSSGKTQVCLYS--AAHVAARHMGAVLYLDTSN 71
Query: 102 VFPTARLAQLCELSPLA---KPK------------CSDKIFITHCYEFID-LKRTLESQS 145
F +R+A + + P++ +PK C I +E +D L+ +L +
Sbjct: 72 SFSPSRIAHILDELPISLIKEPKDMRLKRVMSSIICESVFDIFALFEVLDRLEVSLNCKV 131
Query: 146 GFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
NK+ +++IDS++ + K Q M +A L +L+ KH + V+ TN +
Sbjct: 132 TNGSNKICLLIIDSVSSLLAPIIG-GKNSQGRSMMISVAMILKKLAHKHNLSVLVTNHMV 190
Query: 206 SAMTHSDKNIPALGLTYERAHDMR 229
+ + PALG +++ A +R
Sbjct: 191 AG---NGAPKPALGESWKAAPHIR 211
>gi|406603267|emb|CCH45195.1| DNA repair protein [Wickerhamomyces ciferrii]
Length = 352
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 110 ICLTTGSKQLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L + D + Y D + L +Q+ + E++ +
Sbjct: 170 IDTEGTFRPVRLVSIARRYGLNEDDALDNVAYARAYN-ADHQLQLLNQAAAMMSESRFSL 228
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DSI ++R +A + R + L L+ + I V+ TNQV +
Sbjct: 229 LIVDSIMALYRTDFAGRGELSARQMHVAKYMRTLQRLADEFGIAVVITNQVVA 281
>gi|320580957|gb|EFW95179.1| DNA repair protein Rad51 [Ogataea parapolymorpha DL-1]
Length = 369
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ + G LY
Sbjct: 122 ICLTTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAVTCQLPIDNGGGEGKCLY 181
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + L + + D + Y L+ ++ S E++ ++
Sbjct: 182 IDTEGTFRPIRLVAIARRFGLDENETLDNVAYARAYNADHQLQLLHQAASMMTESRFSLL 241
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R Y+ + R + L L+ + I V+ TNQV +
Sbjct: 242 IVDSIMALYRTDYSGRGELSARQMHVAKFMRTLQRLADEFGIAVVITNQVVA 293
>gi|347968908|ref|XP_003436320.1| AGAP013412-PA [Anopheles gambiae str. PEST]
gi|333467786|gb|EGK96693.1| AGAP013412-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITE+ G GKTQLC + ++ Q+ G LY
Sbjct: 100 IQLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLPVSQNGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL E L D + Y L S + E++ +I
Sbjct: 160 IDTEGTFRPERLLATAERYKLVGADVLDNVAYARAYNTDHQMHLLMVASAMMAESRYALI 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATSLYRTDYSGRGELAARQTHLAKFLRMLLRLADEFGVAVLITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+ D P G
Sbjct: 280 NPDPKKPIGG 289
>gi|296191896|ref|XP_002743822.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog isoform
1 [Callithrix jacchus]
Length = 339
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 63 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 122
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 123 AFGEFRTGKTQLSHTLCVTAQLPGAGDYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 182
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + + G + +++IDSI +FR ++ +
Sbjct: 183 VLDNVLYARAYTSEHQMELLDYVAAKFHEEPGIFK----LLIIDSIMALFRVDFSGRGEL 238
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 239 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 271
>gi|146417037|ref|XP_001484488.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 333
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I V+TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 89 ICVTTGSKQLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 148
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIEN 150
I TE F RL + + L C D + H ++ +++ + ++S F
Sbjct: 149 IDTEGTFRPVRLVLIAQRYGLNPDDCLDNVAYARAYNAEHQFQLLNMAAQMMAESRF--- 205
Query: 151 KVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++++DSI ++R Y+ + R + L L+ + I V+ TNQV +
Sbjct: 206 --SLLIVDSIMSLYRTDYSGRGELSARQAHVAKYMRTLQRLADEFGIAVVITNQVVA 260
>gi|157822405|ref|NP_001102674.1| DNA repair protein RAD51 homolog 1 [Rattus norvegicus]
gi|149022997|gb|EDL79891.1| similar to DNA repair protein RAD51 homolog 1 (predicted) [Rattus
norvegicus]
gi|197246432|gb|AAI68875.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Rattus
norvegicus]
Length = 339
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|50978688|ref|NP_001003043.1| DNA repair protein RAD51 homolog 1 [Canis lupus familiaris]
gi|75047603|sp|Q8MKI8.1|RAD51_CANFA RecName: Full=DNA repair protein RAD51 homolog 1; AltName:
Full=cRad51
gi|20387091|dbj|BAB91246.1| Rad51 [Canis lupus familiaris]
Length = 339
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|32250967|gb|AAP74362.1| DNA repair protein Rad51 [Ogataea angusta]
Length = 369
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ + G LY
Sbjct: 122 ICLTTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAVTCQLPIDNGGGEGKCLY 181
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + L + + D + Y L+ ++ S E++ ++
Sbjct: 182 IDTEGTFRPIRLVAIARRFGLDENETLDNVAYARAYNADHQLQLLHQAASMMTESRFSLL 241
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R Y+ + R + L L+ + I V+ TNQV +
Sbjct: 242 IVDSIMALYRTDYSGRGELSARQMHVAKFMRTLQRLADEFGIAVVITNQVVA 293
>gi|355715056|gb|AES05211.1| RAD51-like protein [Mustela putorius furo]
Length = 338
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|2262211|gb|AAB63359.1| RecA-like protein [Mus musculus]
Length = 350
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVSQPHKG 93
++ +ST D L GG+ G +TE++G GCGKTQ C+ M L +
Sbjct: 78 LSPAFLSTTLCALDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGA 137
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-----CYEFI--DLKRTLES-QS 145
V+YI TES F RL ++ E +K+ +T C E L + LES +
Sbjct: 138 VVYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEE 197
Query: 146 GFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I V ++++DSIA + R + + +R + A L L+ + I VI TN
Sbjct: 198 EIISKGVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTN 257
Query: 203 QVTSAMTHSDKNIPALGLTYERAHDM 228
Q+T TH +P+ A D+
Sbjct: 258 QIT---THLSGALPSQADLVSPADDL 280
>gi|344293992|ref|XP_003418703.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Loxodonta
africana]
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|6755276|ref|NP_035364.1| DNA repair protein RAD51 homolog 1 [Mus musculus]
gi|585772|sp|Q08297.1|RAD51_MOUSE RecName: Full=DNA repair protein RAD51 homolog 1; AltName:
Full=RAD51 homolog A
gi|397831|dbj|BAA02961.1| MmRad51 [Mus musculus]
gi|407349|dbj|BAA02718.1| Rad51 protein [Mus musculus]
gi|12847236|dbj|BAB27489.1| unnamed protein product [Mus musculus]
gi|20073272|gb|AAH27384.1| RAD51 homolog (S. cerevisiae) [Mus musculus]
gi|26345412|dbj|BAC36357.1| unnamed protein product [Mus musculus]
gi|74185375|dbj|BAE30162.1| unnamed protein product [Mus musculus]
gi|74185412|dbj|BAE30179.1| unnamed protein product [Mus musculus]
gi|148695989|gb|EDL27936.1| RAD51 homolog (S. cerevisiae), isoform CRA_b [Mus musculus]
gi|1093114|prf||2102359A RAD51-like protein
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|346465319|gb|AEO32504.1| hypothetical protein [Amblyomma maculatum]
Length = 296
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E K+ L A ++ + D+ +I +TGS++ D +L GGI G ITE+ G GKT
Sbjct: 73 EAAKLVPLGFTTATEIHQKRSDIVQI--TTGSKELDKLLGGGIETGSITEMFGEFRTGKT 130
Query: 76 QLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHC 131
QLC + ++ Q+ H G LYI TE F RL + + L+ D +
Sbjct: 131 QLCHMLAVTCQLPIEHSGGEGKCLYIDTEGTFRPERLLAVADKYGLSGQDVLDNVAYARA 190
Query: 132 YEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHE 189
Y + L S + E + ++++DS ++R Y+ + R + L
Sbjct: 191 YNSDHQTQLLIQASAMMAETRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 250
Query: 190 LSIKHRIVVICTNQVTS 206
L+ + + V+ TNQV +
Sbjct: 251 LADEFGVAVVITNQVVA 267
>gi|307212541|gb|EFN88264.1| DNA repair protein RAD51-like protein 1 [Harpegnathos saltator]
Length = 340
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 14/216 (6%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E +K+ ++ + A ++ + I + ++TGS++ D++L GGI G ITEL G GK+
Sbjct: 77 EASKLVNMGFRSATEI--HQIRANIVYITTGSKELDNLLGGGIETGSITELFGEFRSGKS 134
Query: 76 QLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHC 131
QLC + ++ Q+ G LYI TE+ F RL + E ++ D +
Sbjct: 135 QLCHTLAVNCQLPISMGGAEGRCLYIDTENGFRPERLTAVAERYKISGDSVLDNVACARA 194
Query: 132 YEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHE 189
+ + +++ + E + +++IDS ++R Y + +R + L
Sbjct: 195 FNTDHQTQLVVQASAMMTEARYALLIIDSATSLYRTDYCGRGELSERQQHLARFLRMLLR 254
Query: 190 LSIKHRIVVICTNQV------TSAMTHSDKNIPALG 219
++ +H I V+ TNQV ++M D+ P G
Sbjct: 255 IADEHGIAVVITNQVVAQVDGAASMFGGDQKKPIGG 290
>gi|431896119|gb|ELK05537.1| DNA repair protein RAD51 like protein 1 [Pteropus alecto]
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|114051383|ref|NP_001039644.1| DNA repair protein RAD51 homolog 1 [Bos taurus]
gi|301754892|ref|XP_002913265.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Ailuropoda
melanoleuca]
gi|410961504|ref|XP_003987322.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Felis
catus]
gi|426232982|ref|XP_004010496.1| PREDICTED: DNA repair protein RAD51 homolog 1 isoform 1 [Ovis
aries]
gi|116255982|sp|Q2KJ94.1|RAD51_BOVIN RecName: Full=DNA repair protein RAD51 homolog 1
gi|86821651|gb|AAI05459.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Bos taurus]
gi|296483320|tpg|DAA25435.1| TPA: DNA repair protein RAD51 homolog 1 [Bos taurus]
gi|440911678|gb|ELR61319.1| DNA repair protein RAD51-like protein 1 [Bos grunniens mutus]
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|149692472|ref|XP_001503572.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1 [Equus
caballus]
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|348579949|ref|XP_003475741.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1 [Cavia
porcellus]
Length = 339
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|319411653|emb|CBQ73697.1| DNA repair protein RAD51 [Sporisorium reilianum SRZ2]
Length = 354
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D+IL GG+ G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 100 ISITTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L + D + Y L+ +++ + E++ ++
Sbjct: 160 IDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFSLL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ ++R ++ + R + L L+ + + V+ TNQV +
Sbjct: 220 IVDSLTSLYRTDFSGRGELSARQMHLAKFLRGLMRLADEFGVAVVITNQVVA 271
>gi|126723348|ref|NP_001075493.1| DNA repair protein RAD51 homolog 1 [Oryctolagus cuniculus]
gi|6225914|sp|O77507.1|RAD51_RABIT RecName: Full=DNA repair protein RAD51 homolog 1
gi|3387769|gb|AAC28561.1| Rad51 [Oryctolagus cuniculus]
Length = 339
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVTVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|390961215|ref|YP_006425049.1| DNA recombination and repair protein, RecA-like protein
[Thermococcus sp. CL1]
gi|390519523|gb|AFL95255.1| DNA recombination and repair protein, RecA-like protein
[Thermococcus sp. CL1]
Length = 354
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
+STGS+ D +L GGI ITE+ G G GKTQL + + +Q+ P +G V++I
Sbjct: 118 ISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLP-PEEGGLGGSVIWI 176
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLE--SQSGFIENK 151
TE+ F R+ Q+ E L + I++ + + + ++R E + +
Sbjct: 177 DTENTFRPERIRQIAENRGLDPDETLKNIYVARAFNSNHQMLLVERAEEIIKEKAETDRP 236
Query: 152 VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V ++V+DS+ FR+ Y +R + LH ++ + I V TNQV +
Sbjct: 237 VKLLVVDSLMAHFRSEYVGRGTLAERQQKLAKHLADLHRIADLYDIAVFVTNQVQA 292
>gi|310793292|gb|EFQ28753.1| hypothetical protein GLRG_03897 [Glomerella graminicola M1.001]
Length = 350
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 103 ISITTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L Q+G + E + +
Sbjct: 163 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYN-SDHQLQLLQQAGAMMCETRFSL 221
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 222 LIVDSATALYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 281
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 282 AMFNPDPKKPVGG 294
>gi|340059041|emb|CCC53412.1| putative RAD51 protein [Trypanosoma vivax Y486]
Length = 410
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+V+TGS + D +L GGI G ITEL G GKTQLC +C++ Q+ + G LY
Sbjct: 170 IMVTTGSREVDKLLGGGIETGSITELFGEFRTGKTQLCHTLCVTCQLPISNGGAEGMALY 229
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L + Y + L S + EN+ +I
Sbjct: 230 IDTEGTFRPERLVAVAERYKLDAQDVLANVACARAYNSDHQQNLLVQASAMMAENRFAII 289
Query: 156 VIDSIAGIFRNTY 168
++DS ++R Y
Sbjct: 290 IVDSATALYRTDY 302
>gi|449265652|gb|EMC76815.1| Meiotic recombination protein DMC1/LIM15 like protein, partial
[Columba livia]
Length = 346
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 70 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 129
Query: 66 LSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ S + G +++I TE+ F RL + + +
Sbjct: 130 AFGEFRTGKTQLSHTLCVTAQLPGSNGYTGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 189
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 190 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 245
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 246 AERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 278
>gi|31982072|ref|NP_033040.2| DNA repair protein RAD51 homolog 2 isoform 1 [Mus musculus]
gi|38258893|sp|O35719.2|RA51B_MOUSE RecName: Full=DNA repair protein RAD51 homolog 2; Short=R51H2;
AltName: Full=RAD51 homolog B; AltName: Full=RAD51-like
protein 1
gi|26328691|dbj|BAC28084.1| unnamed protein product [Mus musculus]
gi|148670701|gb|EDL02648.1| RAD51-like 1 (S. cerevisiae), isoform CRA_b [Mus musculus]
Length = 350
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVSQPHKG 93
++ +ST D L GG+ G +TE++G GCGKTQ C+ M L +
Sbjct: 78 LSPAFLSTTLCALDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGA 137
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH-----CYEFI--DLKRTLES-QS 145
V+YI TES F RL ++ E +K+ +T C E L + LES +
Sbjct: 138 VVYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEE 197
Query: 146 GFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I V ++++DSIA + R + + +R + A L L+ + I VI TN
Sbjct: 198 EIISKGVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTN 257
Query: 203 QVTSAMTHSDKNIPALGLTYERAHDM 228
Q+T TH +P+ A D+
Sbjct: 258 QIT---THLSGALPSQADLVSPADDL 280
>gi|385301680|gb|EIF45853.1| dna repair protein rad51 [Dekkera bruxellensis AWRI1499]
Length = 396
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 149 ITLTTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAITAQLPVDMGGGEGKCLY 208
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L + + D + Y D + L Q+ + +++ +
Sbjct: 209 IDTEGTFRPVRLVSIARRFGLDENEALDNVAYARAYN-ADHQMQLLKQAAQMMSQSRFSL 267
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-----TSAM 208
+++DS+ ++R Y+ + R + L L+ + I V+ TNQV +SA+
Sbjct: 268 LIVDSVMALYRTDYSGRAELSARQMHVAKFMRALQRLADEFGIAVLITNQVVAQVDSSAI 327
Query: 209 THSDKNIPALG 219
+ D P G
Sbjct: 328 FNPDPKKPIGG 338
>gi|156098342|ref|XP_001615203.1| DNA repair protein RAD51 [Plasmodium vivax Sal-1]
gi|148804077|gb|EDL45476.1| DNA repair protein RAD51, putative [Plasmodium vivax]
Length = 350
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E + K+K K+ N ID + I +TGS++ DS+LKGGI GGITE
Sbjct: 75 GISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDSLLKGGIETGGITE 134
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GK+QLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 135 LFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTD 194
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
C + I Y L S + + + ++++DS ++R+ Y + R
Sbjct: 195 CLNNIAYAKAYNCDHQTELLIDASAMMADARFALLIVDSATALYRSEYIGRGELASRQSH 254
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + + VI TNQV +
Sbjct: 255 LCRFLRGLQRIADIYGVAVIITNQVVA 281
>gi|341582518|ref|YP_004763010.1| DNA repair and recombination protein RadA [Thermococcus sp. 4557]
gi|340810176|gb|AEK73333.1| DNA repair and recombination protein RadA [Thermococcus sp. 4557]
Length = 354
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
+STGS+ D ++ GG+ ITE+ G G GKTQL + + +Q+ + H V++I
Sbjct: 118 ISTGSKSLDKLVGGGVETQAITEVFGEFGSGKTQLAHTLAVMVQLPEEEGGLHGSVVWID 177
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLE--SQSGFIENKV 152
TE+ F R+ Q+ E L + I++ + + + ++R E + + V
Sbjct: 178 TENTFRPERIRQIAEARGLDPDETLKNIYVARAFNSNHQMLLVERAEEIIKEKAETDRPV 237
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR+ Y +R + LH ++ + I V TNQV +
Sbjct: 238 KLLVVDSLMAHFRSEYVGRGTLAERQQKLAKHLADLHRIADLYDIAVFVTNQVQA 292
>gi|425774458|gb|EKV12765.1| DNA repair protein RAD51, putative [Penicillium digitatum PHI26]
Length = 615
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 368 ISITTGSKRLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 427
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 428 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 487
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-------TSA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 488 VVDSATSLYRTDFNGRGELASRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 547
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 548 MFNPDPKKPIGG 559
>gi|444706842|gb|ELW48160.1| Protein CASC5 [Tupaia chinensis]
Length = 1640
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 1401 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 1460
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 1461 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 1520
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 1521 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 1580
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 1581 AADPKKPIGG 1590
>gi|71018413|ref|XP_759437.1| DNA repair protein RAD51 [Ustilago maydis 521]
gi|2500102|sp|Q99133.1|RAD51_USTMA RecName: Full=DNA repair protein RAD51
gi|1480734|gb|AAC61878.1| Rad51 [Ustilago maydis]
gi|46099044|gb|EAK84277.1| RA51_USTMA DNA repair protein RAD51 [Ustilago maydis 521]
Length = 339
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D+IL GG+ G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 100 ISITTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE+ F RL + E L + D + Y L+ +++ + E++ ++
Sbjct: 160 IDTENTFRPTRLLAVAERFGLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFSLL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ ++R ++ + R + L L+ + + V+ TNQV +
Sbjct: 220 IVDSLTSLYRTDFSGRGELSARQMHLAKFLRGLMRLADEFGVAVVITNQVVA 271
>gi|403216757|emb|CCK71253.1| hypothetical protein KNAG_0G01960 [Kazachstania naganishii CBS
8797]
Length = 329
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP------IDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K +VG P + I +STG++ D+IL GGI IT
Sbjct: 54 GLSEVKVEKIKE-AAAKIVRVGFVPATLQLELRQRVIALSTGAKNLDAILGGGIMTMSIT 112
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+ E L
Sbjct: 113 EVFGEFRCGKTQMSHTLCVTAQLPREMGGGEGKVAYIDTEGTFRPERIRQIAERYELDPD 172
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTY-AEDKYVQRAH 178
C + I +E G + + +I++DSI FR Y + +R
Sbjct: 173 TCLENITYARALNSEHQMELVEQLGGELSSGDYRLIIVDSIMANFRVDYCGRGELNERQQ 232
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L+ L+ + + V NQV S
Sbjct: 233 RLNQHLFKLNRLAEEFNVAVFMANQVQS 260
>gi|388854421|emb|CCF52005.1| probable DNA repair protein RAD51 [Ustilago hordei]
Length = 339
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D+IL GG+ G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 100 ISITTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L + D + Y L+ +++ + E++ ++
Sbjct: 160 IDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFSLL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ ++R ++ + R + L L+ + + V+ TNQV +
Sbjct: 220 IVDSLTSLYRTDFSGRGELSARQMHLAKFLRGLMRLADEFGVAVVITNQVVA 271
>gi|295661572|ref|XP_002791341.1| meiotic recombination protein DMC1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280903|gb|EEH36469.1| meiotic recombination protein DMC1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 541
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++FDSIL GG + I+E+ G CGKTQL M + Q+ + G V Y
Sbjct: 22 VKISTGSKQFDSILAGGFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAY 81
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVG 153
I TE F R+AQ+ E + + I ++L TL + F +
Sbjct: 82 IDTEGTFRPERIAQIAERFGVDSDSALENITYARALNSEHQLELLNTLSKE--FAGGEYR 139
Query: 154 MIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDSI FR Y + R + L ++ + + V+ TNQV S
Sbjct: 140 LLIIDSIMNCFRVDYCGRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 193
>gi|350537799|ref|NP_001233686.1| DNA repair protein RAD51 homolog 1 [Cricetulus griseus]
gi|2500103|sp|P70099.1|RAD51_CRIGR RecName: Full=DNA repair protein RAD51 homolog 1
gi|1552258|emb|CAA69384.1| rad51 [Cricetulus griseus]
gi|344253210|gb|EGW09314.1| DNA repair protein RAD51-like 1 [Cricetulus griseus]
Length = 339
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 TADPKKPIGG 289
>gi|112982765|ref|NP_001037552.1| Dmc1 homolog [Bombyx mori]
gi|2058711|gb|AAB53331.1| Dmc1 homolog [Bombyx mori]
Length = 341
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
GF + +V K+K+ +K F D + V +STGS + D +L GGI + ITE
Sbjct: 65 GFSDTKVEKIKEACQKVVTLGFMTALEVSDRRKQVFKISTGSTELDKLLAGGIESMAITE 124
Query: 66 LSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQL +C++ Q+ S+ ++G V+++ TE F RL + + L +
Sbjct: 125 VFGEFRTGKTQLSHTLCVTTQIPNSKGYQGGKVMFLDTEHTFRPDRLRPIADRFNLDQNA 184
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 185 VLDNVLYARAYTSEHQAELLDYVAAKFHEEAGVFK----LLIIDSIMALFRVDFSGRGEL 240
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
R + + L ++S ++ + V TNQ+T+
Sbjct: 241 ADRQQKLAQVLSRLQKISEEYNVAVFITNQMTA 273
>gi|320032013|gb|EFW13969.1| meiotic recombination protein dmc1 [Coccidioides posadasii str.
Silveira]
Length = 338
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + I STGS++FD+IL G
Sbjct: 55 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVRI--STGSKQFDAILNG 112
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+ Q+
Sbjct: 113 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPRSMGGAEGKVAYIDTEGTFRPERVGQIA 172
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 173 ERFGVDPDSSLENIAYARALNSEHQLELLNTLSKE--FAGGEYRLLIIDSIMNCFRVDYC 230
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 231 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 268
>gi|195503840|ref|XP_002098822.1| GE23723 [Drosophila yakuba]
gi|194184923|gb|EDW98534.1| GE23723 [Drosophila yakuba]
Length = 406
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+ TG++ D+ GGI G + EL G SG GKTQ+CLQ+CL++Q+ + G+ L+I
Sbjct: 182 ILTGNKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFID 241
Query: 99 TESVFPTARLAQLC---------ELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE 149
T F RL +L ++ K K++ C++ L T+ S +
Sbjct: 242 TNQDFHPDRLKELALKLERQYAHKVPEFKAHKMLQKVYYVKCHKLHQLMATVLSCHRHLA 301
Query: 150 N--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
N + +IVIDS+A R ED QR + +L + L H + + TN +T
Sbjct: 302 NHPDIKLIVIDSLAFTLR--MLEDG-AQRYEMLLELHESMRRLQRHHELAWVFTNVLTHR 358
Query: 208 MTHSDKNI-PALG 219
+ PALG
Sbjct: 359 YVRKKFQVEPALG 371
>gi|54696278|gb|AAV38511.1| RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) [Homo
sapiens]
Length = 339
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ + +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGEGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG-FIENKVGMI 155
I TE F RL + E L+ D + + + L S +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|221055874|ref|XP_002259075.1| recombinase rad51 [Plasmodium knowlesi strain H]
gi|193809146|emb|CAQ39848.1| recombinase rad51, putative [Plasmodium knowlesi strain H]
Length = 350
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS++ DS+LKGGI GGITEL G GK+QLC + ++ Q+ G L+
Sbjct: 110 IKFTTGSKQLDSLLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLW 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMI 155
I TE F R+ + + L C + I Y L S + + + ++
Sbjct: 170 IDTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALL 229
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y + R + L ++ + + VI TNQV +
Sbjct: 230 IVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVA 281
>gi|443897777|dbj|GAC75116.1| DNA repair protein RAD51/RHP55 [Pseudozyma antarctica T-34]
Length = 280
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D+IL GG+ G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 27 ISITTGSKNLDAILGGGMETGSITELYGEFRTGKSQLCHTLAVTCQLPVDMGGGEGKCLY 86
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L + D + Y L+ +++ + E++ ++
Sbjct: 87 IDTEGTFRPTRLLAVAERYGLNGEEVLDNVAYARAYNADHQLQLLMQASAMMAESRFSLL 146
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ ++R ++ + R + L L+ + + V+ TNQV +
Sbjct: 147 IVDSLTSLYRTDFSGRGELSARQMHLAKFLRGLMRLADEFGVAVVITNQVVA 198
>gi|392867439|gb|EJB11331.1| meiotic recombinase Dmc1 [Coccidioides immitis RS]
Length = 338
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + I STGS++FD+IL G
Sbjct: 55 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVRI--STGSKQFDAILNG 112
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+ Q+
Sbjct: 113 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPRSMGGAEGKVAYIDTEGTFRPERVGQIA 172
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 173 ERFGVDPDSSLENIAYARALNSEHQLELLNTLSKE--FAGGEYRLLIIDSIMNCFRVDYC 230
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 231 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 268
>gi|308161798|gb|EFO64232.1| Dmc1b [Giardia lamblia P15]
Length = 368
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+ + + K F G + E V +STG F+++L GG+ ITE
Sbjct: 94 GISEAKVDKILSIATEMCGKTFITGSEALKKREQVKRLSTGCADFNALLGGGVETMSITE 153
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQLC + ++ Q+ G +YI TE F ++A + E L K
Sbjct: 154 VFGEFRTGKTQLCHTLAVTAQLPVSKGGGAGKTVYIDTEGTFRPEKVAPIAERFGLNPKK 213
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGF----IENKVGMIVIDSIAGIFRNTY-AEDKYVQR 176
D I + Y ++ +E + IEN+ ++++DS+ +FR + + R
Sbjct: 214 ALDNIMVARVYTH---EQQIECITALPKLMIENQFSLVIVDSLTALFRVDFTGRGELADR 270
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
+ L +L+ + + + TNQV +AM +D P G
Sbjct: 271 QQKLGQHLSGLAKLADEFNLAIFVTNQVMAQVDGAAMFTADPKKPIGG 318
>gi|327296680|ref|XP_003233034.1| meiotic recombination protein dmc1 [Trichophyton rubrum CBS 118892]
gi|326464340|gb|EGD89793.1| meiotic recombination protein dmc1 [Trichophyton rubrum CBS 118892]
Length = 337
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FD+IL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDTILGG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVIAQLPKDMGGAEGKAAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENISYARALNSEHQLELLNTLAKE--FASGEYRLLIIDSIMNCFRVDYC 229
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|348569516|ref|XP_003470544.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Cavia
porcellus]
Length = 340
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|281351151|gb|EFB26735.1| hypothetical protein PANDA_002516 [Ailuropoda melanoleuca]
Length = 285
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 32 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 91
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 92 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 149
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 150 NAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 205
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 206 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 240
>gi|70939108|ref|XP_740140.1| Rad51 [Plasmodium chabaudi chabaudi]
gi|56517647|emb|CAH76360.1| Rad51 homolog, putative [Plasmodium chabaudi chabaudi]
Length = 324
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E + K+K K+ N ID + I +TGS++ D++LKGGI GGITE
Sbjct: 74 GISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITE 133
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GK+QLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 134 LFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTD 193
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
C + I Y L S + + + ++++DS ++R+ Y + R
Sbjct: 194 CLNNIAYAKAYNCDHQTELLIDASAMMADTRFALLIVDSATALYRSEYTGRGELANRQSH 253
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + + VI TNQV +
Sbjct: 254 LCRFLRGLQRIADIYGVAVIITNQVVA 280
>gi|63852080|dbj|BAD98459.1| RecA homolog DMC1 [Anguilla japonica]
gi|90403222|dbj|BAE92010.1| Dmc1 [Anguilla japonica]
Length = 339
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 11 GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGI 63
G E +V+K+K+ K AF+ + + I +TGS +FD ++ GGI + I
Sbjct: 63 GLSEAKVDKIKEAAGKLLSNGFLTAFEYSERRKQVFHI--TTGSLEFDKLIGGGIESMAI 120
Query: 64 TELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAK 119
TE G GKTQL +C++ Q+ + G V++I TE+ F RL + + + +
Sbjct: 121 TEAFGEFRTGKTQLSHTLCVTAQLPGEDGYTGGKVIFIDTENTFRPDRLKDIADRFSVDQ 180
Query: 120 PKCSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDK 172
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 181 EAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGE 237
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 238 LAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 280
>gi|238878354|gb|EEQ41992.1| meiotic recombination protein DMC1 [Candida albicans WO-1]
Length = 353
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS++F+ IL GGI + ITE+ G CGKTQLC +C++ Q+ G V YI
Sbjct: 116 ITTGSKQFNEILGGGIQSMSITEVFGEFRCGKTQLCHTLCVAAQLPTDMGGGEGRVAYID 175
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMI 155
TE F R+ + E + C + I I+L L ++ E ++
Sbjct: 176 TEGTFRPDRIRSIAERYGVDADTCLENISYARALNSEHQIELVEQLGNE--LAEGTFRLL 233
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI FR Y+ + +R + L ++ + I V TNQV S
Sbjct: 234 IVDSIMACFRVDYSGRGELNERQQKLNQHLSNLTRVAEDYNIAVFLTNQVQS 285
>gi|254572065|ref|XP_002493142.1| Strand exchange protein, forms a helical filament with DNA that
searches for homology [Komagataella pastoris GS115]
gi|238032940|emb|CAY70963.1| Strand exchange protein, forms a helical filament with DNA that
searches for homology [Komagataella pastoris GS115]
gi|328352840|emb|CCA39238.1| DNA repair protein rhp51 [Komagataella pastoris CBS 7435]
Length = 362
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+K D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 120 ICITTGSKKLDTLLGGGIETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 179
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + + L + D + Y D + L +Q+ + E++ +
Sbjct: 180 IDTEGTFRPIRLVSIAKRYGLNEDDTLDNVAYARAYN-ADHQLQLLNQAAAMMSESRFSL 238
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-----TSAM 208
+++DSI ++R ++ + R + L L+ + I V+ TNQV SA+
Sbjct: 239 LIVDSIMALYRTDFSGRGELSARQMHVAKYMRTLQRLADEFGIAVLITNQVVAQVDASAV 298
Query: 209 THSDKNIPALG 219
+ D P G
Sbjct: 299 FNPDPKKPIGG 309
>gi|119719931|ref|YP_920426.1| Rad51-like [Thermofilum pendens Hrk 5]
gi|119525051|gb|ABL78423.1| Rad51-like protein [Thermofilum pendens Hrk 5]
Length = 315
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
++TG + D +L+GG+ I E +G G GKTQLC Q+ ++ Q+ P +G V+Y+
Sbjct: 85 LTTGVKALDELLEGGLVTQEIYEFAGEYGSGKTQLCHQLSVTAQLP-PSRGGLGGKVVYV 143
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMIV 156
TE F +R+ ++ E + +++ +L+ ++ ++ V ++V
Sbjct: 144 DTEGTFSPSRIERIAER--FGVEGALEGVYVARPISVDELEELVIKGLKPLLKGGVKLVV 201
Query: 157 IDSIAGIFRNTYAEDKYV-QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
IDS+ ++R + +++ R + +L L+ + IVV+ TNQV S ++
Sbjct: 202 IDSVIALYRAQFRGREWLAMRQQRINYALDWLKRLARVYSIVVVITNQVVSVPSN 256
>gi|67904210|ref|XP_682361.1| hypothetical protein AN9092.2 [Aspergillus nidulans FGSC A4]
gi|40742735|gb|EAA61925.1| hypothetical protein AN9092.2 [Aspergillus nidulans FGSC A4]
gi|259485496|tpe|CBF82567.1| TPA: meiotic recombination protein (Dmc1), putative
(AFU_orthologue; AFUA_7G02200) [Aspergillus nidulans
FGSC A4]
Length = 658
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 7 MLKL-GFQEWEVNKVKD-----LKKKKAFQVGKNPIDMTEIVV--STGSEKFDSILKGGI 58
+LK+ GF E +V K+K+ L F + VV STGS++FDSIL GG
Sbjct: 54 LLKIKGFSEIKVEKIKEAINKCLPSASGFITAMELSHQRKRVVRISTGSKQFDSILGGGF 113
Query: 59 HAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCEL 114
+ I+E+ G CGKTQL M + Q+ + G V YI TE F R+ Q+ E
Sbjct: 114 QSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAER 173
Query: 115 SPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AE 170
+ + I ++L TL + F+ + +++IDSI FR +
Sbjct: 174 FGVDPDSAKENIAYARALNSEHQLELLNTLSKE--FVGGEYRLLIIDSIMNCFRVDFCGR 231
Query: 171 DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 232 GELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|374633151|ref|ZP_09705518.1| DNA repair and recombination protein RadA [Metallosphaera
yellowstonensis MK1]
gi|373524635|gb|EHP69512.1| DNA repair and recombination protein RadA [Metallosphaera
yellowstonensis MK1]
Length = 324
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 13/216 (6%)
Query: 16 EVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
E D++ K A ++ + + +I +T S+ D +L GGI +TEL G G GKT
Sbjct: 64 EARDALDIRFKTALEIEQERASVKKI--TTSSQALDGLLGGGIETRTMTELFGEFGSGKT 121
Query: 76 QLCLQMCLSLQVSQPHKG-----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITH 130
Q+C Q+ +++Q+ P KG LYI TE F T R+ + L + I
Sbjct: 122 QICHQISVNVQLP-PEKGGLAGKALYIDTEGTFRTERIRAMASALGLDPKEALSNIMSIR 180
Query: 131 CYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYL 187
+E I ++++ ++V+DS+ FR Y+ + R + H L
Sbjct: 181 AINTDHQIAIVEELQDLIAKDDRIKLVVVDSVTSHFRAEYSGRENLAARQQKLNRHLHQL 240
Query: 188 HELSIKHRIVVICTNQVTSA--MTHSDKNIPALGLT 221
L+ + + V+ TNQV + M + D + G T
Sbjct: 241 VRLAEIYDLAVVVTNQVMARPDMFYGDPTVAVGGHT 276
>gi|344296228|ref|XP_003419811.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Loxodonta africana]
Length = 340
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYQGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|380492247|emb|CCF34743.1| DNA repair protein rhp51 [Colletotrichum higginsianum]
Length = 350
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 103 ISITTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L Q+G + E + +
Sbjct: 163 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYN-SDHQLQLLQQAGAMMCETRFSL 221
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 222 LIVDSATALYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 281
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 282 AMFNPDPKKPIGG 294
>gi|351699284|gb|EHB02203.1| Meiotic recombination protein DMC1/LIM15-like protein
[Heterocephalus glaber]
Length = 340
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|73969089|ref|XP_849984.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog isoform
1 [Canis lupus familiaris]
Length = 340
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|311255074|ref|XP_003126070.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog isoform
1 [Sus scrofa]
Length = 340
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|261194837|ref|XP_002623823.1| DNA repair protein RAD51 [Ajellomyces dermatitidis SLH14081]
gi|239588361|gb|EEQ71004.1| DNA repair protein RAD51 [Ajellomyces dermatitidis SLH14081]
gi|239613363|gb|EEQ90350.1| DNA repair protein RAD51 [Ajellomyces dermatitidis ER-3]
gi|327351860|gb|EGE80717.1| DNA repair protein RAD51 [Ajellomyces dermatitidis ATCC 18188]
Length = 348
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D I Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNIAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + I V+ TNQV SA
Sbjct: 221 IVDSATALYRTDFSGRGELANRQNHLAKFMRKLRTLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|10944306|dbj|BAB16892.1| DMC1 [Cynops pyrrhogaster]
Length = 342
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 66 GLSEAKVDKIKEAVNKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + + G V++I TE+ F RL + + +
Sbjct: 126 TFGEFRTGKTQLSHTLCVTAQLPGTDGYTGGKVIFIDTENTFRPDRLRDIADRFSVDHDA 185
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + ++VIDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLVIDSIMALFRVDFSGRGEL 241
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 242 AERQQKLAQMLARLQKISEEYNVAVFVTNQMTA 274
>gi|410965553|ref|XP_003989311.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Felis
catus]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|315231638|ref|YP_004072074.1| DNA repair and recombination RadA-like protein [Thermococcus
barophilus MP]
gi|315184666|gb|ADT84851.1| DNA repair and recombination RadA-like protein [Thermococcus
barophilus MP]
Length = 355
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
+STGS+ D +L GGI ITE+ G G GKTQ+ + + +Q+ P +G V++I
Sbjct: 119 ISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQIAHTLAVMVQLP-PEEGGLNGSVIWI 177
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK------ 151
TE+ F R+ Q+ E L + I++ Y +E I+ K
Sbjct: 178 DTENTFRPERIRQIAENRGLDPDEVLKNIYVARAYNTNHQMLLVEKAEEIIKEKLNTDRP 237
Query: 152 VGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V ++V+DS+ FR+ Y +R + LH L+ + I + TNQV +
Sbjct: 238 VKLMVVDSLTSHFRSEYVGRGALAERQQKLGKHLADLHRLANLYDIAIFVTNQVQA 293
>gi|169843884|ref|XP_001828666.1| Rah1 [Coprinopsis cinerea okayama7#130]
gi|3237296|gb|AAC23703.1| Rah1 [Coprinopsis cinerea]
gi|116510275|gb|EAU93170.1| Rah1 [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+E+V ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G
Sbjct: 98 SELVHITTGSKQLDALLGGGIETGAITELFGEFRTGKSQICHTLAVTCQLPVSMGGGEGK 157
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
LYI TE F RL + E L + D + Y + L S S + E++
Sbjct: 158 CLYIDTEGTFRPVRLLAVAERFGLNGEEVLDNVAYARAYNADHQQALLTSASALMSESRF 217
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++++DS ++R ++ + R + L L+ + I V+ TNQV S
Sbjct: 218 CLLIVDSCTALYRTDFSGRGELSSRQTHLGKFLRTLQRLADEFGIAVVVTNQVMS 272
>gi|149743044|ref|XP_001501634.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Equus
caballus]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|326476592|gb|EGE00602.1| meiotic recombination protein dmc1 [Trichophyton tonsurans CBS
112818]
Length = 337
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FD+IL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDTILGG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVIAQLPKDLGGAEGKAAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 172 ERFGIDPDSALENISYARALNSEHQLELLNTLAKE--FASGEYRLLIIDSIMNCFRVDYC 229
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>gi|269986696|gb|EEZ92976.1| DNA repair and recombination protein RadA [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 345
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+ST SE + +L GG+ ITE G G GK+QL Q+ + +Q+ G+ ++I
Sbjct: 106 ISTSSEALNILLGGGVETQSITECYGEYGSGKSQLAFQLAVDVQLPLEKGGLEGHAIWID 165
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE F +R+ QL + L + I I Y ++ I + K+ +IV
Sbjct: 166 TEGTFRPSRIEQLAAVKGLDPKQALQNIKIGRAYSSDHQVLLVDKVPELINADPKIKLIV 225
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ +FR Y V R + + H L L+ + + V TNQV +
Sbjct: 226 VDSMMALFRAEYVGRGTLVDRQQKVNVVLHNLQRLADRFNVAVYITNQVMA 276
>gi|213403772|ref|XP_002172658.1| DNA repair protein RAD51 [Schizosaccharomyces japonicus yFS275]
gi|212000705|gb|EEB06365.1| DNA repair protein RAD51 [Schizosaccharomyces japonicus yFS275]
Length = 370
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L+GG+ G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 126 ITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 185
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L + D + Y L+ + + E++ ++
Sbjct: 186 IDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMAESRFSLL 245
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L L+ + I V+ TNQV +
Sbjct: 246 VVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVA 297
>gi|288931813|ref|YP_003435873.1| DNA repair and recombination protein RadA [Ferroglobus placidus DSM
10642]
gi|288894061|gb|ADC65598.1| DNA repair and recombination protein RadA [Ferroglobus placidus DSM
10642]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS+ D +L GG+ ITEL G G GKTQ+C Q+ +++Q+ + G V+ I
Sbjct: 103 ITTGSKALDDLLGGGVETQAITELFGEFGSGKTQICHQLAVNVQLPKEKGGLNGVVVVID 162
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE------FIDLKRTLESQSGFIENKV 152
TE F R+ Q+ + L + I++ Y +D + L ++ V
Sbjct: 163 TEGTFRPERIVQMAKAKDLDPDVALENIYVAQAYNSNHQMLLVDNAKELANKLRKEGKHV 222
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR Y R + H L ++ TNQV +
Sbjct: 223 RLLVVDSLTAHFRAEYIGRGTLADRQQKLNRHLHDLLRFGELFNAAIVVTNQVMA 277
>gi|301757528|ref|XP_002914594.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Ailuropoda melanoleuca]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 NAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|300797730|ref|NP_001178267.1| meiotic recombination protein DMC1/LIM15 homolog [Bos taurus]
gi|426225780|ref|XP_004007040.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Ovis
aries]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 NAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|296487030|tpg|DAA29143.1| TPA: DMC1 dosage suppressor of mck1 homolog [Bos taurus]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGXIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 182 NAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 238 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|407926755|gb|EKG19715.1| DNA recombination and repair protein Rad51 [Macrophomina phaseolina
MS6]
Length = 521
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
VST E D+ L GG+ AG +TE++G SG GKTQ L + L+ Q+ PH K LYI
Sbjct: 90 AVSTLDEHLDAELAGGLPAGYLTEITGESGAGKTQFLLTLLLAAQLPPPHGLSKSALYIS 149
Query: 99 TESVFPTARLAQLCELSPL-------AKPKCSDKIFI-THCYEFIDLKRTLESQSGFIEN 150
TE+ T RL QL + P KP + I T E+ D + +
Sbjct: 150 TEAPLATTRLTQLLQQHPRLSSLPASTKPSLQRILSIQTPDLEYQDHVLRYQLPVAIARH 209
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRA---------HDMRDLAHYLHELSIKHRIVVICT 201
VG++V+DS+A +R + ++ +RA + +L L ++ H + V+
Sbjct: 210 DVGLVVLDSVAANYRAEFERPEHDRRAGVEAMARRSAMLVELGALLRSVARAHGVAVVVA 269
Query: 202 NQVT 205
NQV+
Sbjct: 270 NQVS 273
>gi|307167464|gb|EFN61037.1| DNA repair protein RAD51-like protein 1 [Camponotus floridanus]
Length = 340
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ V+TGS++ D +L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 100 VYVTTGSKELDKLLGGGIETGSITEIFGEFRSGKSQLCHTLAVNCQLPICMGGAEGRCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RL + E ++ D + Y + L S + E + ++
Sbjct: 160 IDTENTFRPERLVAVAERYKISGSSVLDNVAYARAYNTDHQTQLLVQASAMMTEARYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS ++R Y+ + R + L L+ +H I V+ TNQV ++M
Sbjct: 220 IVDSATSLYRTDYSGRGELNARQIHLARFLRMLLRLADEHGIAVVITNQVVAQVDGAASM 279
Query: 209 THSDKNIPALG 219
D+ P G
Sbjct: 280 FGGDQKKPIGG 290
>gi|82539154|ref|XP_723988.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478474|gb|EAA15553.1| Rad51 homolog [Plasmodium yoelii yoelii]
Length = 352
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E + K+K K+ N ID + I +TGS++ D++LKGGI GGITE
Sbjct: 77 GISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITE 136
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GK+QLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 137 LFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTD 196
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
C + I Y L S + + + ++++DS ++R+ Y + R
Sbjct: 197 CLNNIAYAKAYNCDHQTELLIDASAMMADTRFALLIVDSATALYRSEYTGRGELANRQSH 256
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + + VI TNQV +
Sbjct: 257 LCRFLRGLQRIADIYGVAVIITNQVVA 283
>gi|429852332|gb|ELA27473.1| DNA repair protein rad51 [Colletotrichum gloeosporioides Nara gc5]
Length = 350
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 103 ISITTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L+ S + E + ++
Sbjct: 163 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNSDHQLQLLQQASAMMCETRFSLL 222
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 223 IVDSATALYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 282
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 283 MFNPDPKKPIGG 294
>gi|326483933|gb|EGE07943.1| Rad51 family protein [Trichophyton equinum CBS 127.97]
Length = 356
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 22/218 (10%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FD+IL G
Sbjct: 73 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDTILGG 130
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G YI TE F R+AQ+
Sbjct: 131 GFQSMSISEVYGEFRCGKTQLSHTMSVIAQLPKDLGGAEGKAAYIDTEGTFRPERIAQIA 190
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY- 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 191 ERFGVDPDSALENISYARALNSEHQLELLNTLAKE--FASGEYRLLIIDSIMNCFRVDYC 248
Query: 169 AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + L ++ + + V+ TNQV S
Sbjct: 249 GRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 286
>gi|6753650|ref|NP_034189.1| meiotic recombination protein DMC1/LIM15 homolog [Mus musculus]
gi|2500100|sp|Q61880.1|DMC1_MOUSE RecName: Full=Meiotic recombination protein DMC1/LIM15 homolog
gi|961476|dbj|BAA09590.1| MmLim15 protein [Mus musculus]
gi|1321647|dbj|BAA10969.1| DMC1 homologue [Mus musculus]
gi|109732931|gb|AAI16768.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Mus musculus]
gi|111601086|gb|AAI19082.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Mus musculus]
gi|148672696|gb|EDL04643.1| disrupted meiotic cDNA 1 homolog, isoform CRA_a [Mus musculus]
Length = 340
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 11 GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAG 61
G E +V K+K+ K AFQ + ++V ++TGS++FD +L GGI +
Sbjct: 64 GLSEAKVEKIKEAANKLIEPGFLTAFQYSER----RKMVFHITTGSQEFDKLLGGGIESM 119
Query: 62 GITELSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELS 115
ITE G GKTQL +C++ Q+ P G +++I TE+ F RL + +
Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQL--PGTGGYSGGKIIFIDTENTFRPDRLRDIADRF 177
Query: 116 PLAKPKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
+ D + Y E +D + ++G + +++IDSI +FR +
Sbjct: 178 NVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDF 233
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 234 SGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|315427207|dbj|BAJ48820.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
gi|315427272|dbj|BAJ48884.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
gi|343485851|dbj|BAJ51505.1| DNA repair protein RadA [Candidatus Caldiarchaeum subterraneum]
Length = 320
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS + D ++ GG+ ITE G G GK+QLC Q+ +++Q+ G+ LYI
Sbjct: 82 ITTGSTRLDLLIGGGVETQAITEFFGEFGSGKSQLCHQLAVNVQLPVRRGGLDGSALYID 141
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVI 157
TE+ F R+ + L + ++I Y +E I+ K V +I++
Sbjct: 142 TENTFRPERVTSMANSLGLNADEVLERIIYAEAYTSDHQILLVEKADKIIKEKNVKLIIV 201
Query: 158 DSIAGIFRNTYAEDKYV-QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS+ FR+ Y + + +R + H L L I + TNQV S
Sbjct: 202 DSLTSHFRSEYLGRQLLPERQQKLNKHMHKLIRLCRAFNIAAVVTNQVMS 251
>gi|198430399|ref|XP_002128226.1| PREDICTED: similar to RAD51-like 3 (S. cerevisiae) [Ciona
intestinalis]
Length = 328
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYIC 98
T V+ TG E D +L GI+ G +TE+ G S GKTQLC +++ S + V+YI
Sbjct: 78 TLAVLPTGCESLDDLLDAGIYTGEVTEIVGPSSSGKTQLCETFAVNVAASF-DQNVIYID 136
Query: 99 TESVFPTARLAQLCE--LSPLAKPKCSDKIFITHCYEFIDLKRTLE-------SQSGFIE 149
T F R+ ++ + S +I ++ C+E +L+ TL+ +Q
Sbjct: 137 TAGGFSAVRVGEIFKKRFSSHNTSATLSRIRVSRCFEVSELRETLDLVRRKMSAQDETFF 196
Query: 150 NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA-- 207
+ + +++IDS+ + +V+ ++ + L+ L+ + V+ TN + +
Sbjct: 197 SSLKVVIIDSVTSLLSTVLYNGTFVEGMASLQSIGRQLNALAKDFALAVVITNDMVTGPQ 256
Query: 208 -MTHSDKNIPALGLTYERAHDMR 229
T PALG + +R
Sbjct: 257 DKTGQFSRKPALGRVWTFVPSVR 279
>gi|374850436|dbj|BAL53425.1| DNA repair protein RadA [uncultured crenarchaeote]
Length = 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS + D ++ GG+ ITE G G GK+QLC Q+ +++Q+ G+ LYI
Sbjct: 82 ITTGSTRLDLLIGGGVETQAITEFFGEFGSGKSQLCHQLAVNVQLPVRRGGLDGSALYID 141
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-VGMIVI 157
TE+ F R+ + L + ++I Y +E I+ K V +I++
Sbjct: 142 TENTFRPERVTSMANSLGLNADEVLERIIYAEAYTSDHQILLVEKADKIIKEKNVKLIIV 201
Query: 158 DSIAGIFRNTYAEDKYV-QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS+ FR+ Y + + +R + H L L I + TNQV S
Sbjct: 202 DSLTSHFRSEYLGRQLLPERQQKLNKHMHKLIRLCRAFNIAAVVTNQVMS 251
>gi|300176270|emb|CBK23581.2| unnamed protein product [Blastocystis hominis]
Length = 341
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 14/139 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TG D LKGGI ITE++G S GK+QL +Q+ ++ +S+ +GV LYI
Sbjct: 196 LTTGCRSIDKCLKGGIPLHSITEITGESSSGKSQLAIQLAVNCILSEKDRGVNGKALYID 255
Query: 99 TESVFPTARLAQL----CELSP-LAKPKCSDKIFITH-CYEFIDLKRTLESQSGFIENK- 151
TES F T RLA + C P + + S+ IFI + + DL L+S ++N
Sbjct: 256 TESSFSTQRLADISNAFCSRHPEFSIDQISENIFIENKVRSYEDLVSLLDSLEDRLKNPS 315
Query: 152 ---VGMIVIDSIAGIFRNT 167
+ +++IDSI +FR +
Sbjct: 316 NSAIRVVIIDSITSLFRGS 334
>gi|414882035|tpg|DAA59166.1| TPA: hypothetical protein ZEAMMB73_144544 [Zea mays]
Length = 342
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 19/246 (7%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVVSTGSEKFDSILK 55
M HT + L G E +V+K+ + +K + F G + + + + ++TGS+ D +L
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKLLNQGFMTGNDLLLKSVVRITTGSQALDELLG 118
Query: 56 GGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLAQL 111
GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+ +
Sbjct: 119 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 178
Query: 112 CELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
E + D I Y + +L L ++ E ++++DS+ +FR +
Sbjct: 179 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFKLLIVDSVIALFRVDF 236
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLTYE 223
+ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 SGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLA 296
Query: 224 RAHDMR 229
A +R
Sbjct: 297 HAATIR 302
>gi|380490832|emb|CCF35741.1| DNA repair protein RAD57 [Colletotrichum higginsianum]
Length = 467
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 20/189 (10%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST + D L GG+ G +TE++G SG GKTQ L + L+ Q+ P+ + LYI
Sbjct: 94 TISTLDDDLDQALGGGLPTGYVTEITGESGVGKTQFLLSLLLAXQLPPPYGLGRPALYIT 153
Query: 99 TESVFPTARLAQL-------CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IEN 150
TE+ T RL+Q+ E+SP +P D I T + + L+ Q +E
Sbjct: 154 TEAQLSTKRLSQMLSANPRFAEVSPEDRPSL-DGISSTSTPDLESQEHILQFQVPVEVER 212
Query: 151 K-VGMIVIDSIAGIFRNTYAEDKYVQ-------RAHDMRDLAHYLHELSIKHRIVVICTN 202
+ +G+IV+DS+A +R + R++++ L L EL+ K+ + V+ N
Sbjct: 213 RNIGLIVLDSVASNYRAEFERGGLSNHGSNMGARSNELTRLGALLRELAQKYNLSVVVAN 272
Query: 203 QVTSAMTHS 211
QV + S
Sbjct: 273 QVADRFSSS 281
>gi|68071341|ref|XP_677584.1| Rad51 [Plasmodium berghei strain ANKA]
gi|56497754|emb|CAH95058.1| Rad51 homolog, putative [Plasmodium berghei]
Length = 349
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E + K+K K+ N ID + I +TGS++ D++LKGGI GGITE
Sbjct: 74 GISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITE 133
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GK+QLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 134 LFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTD 193
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
C + I Y L S + + + ++++DS ++R+ Y + R
Sbjct: 194 CLNNIAYAKAYNCDHQTELLIDASAMMADTRFALLIVDSATALYRSEYTGRGELANRQSH 253
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + + VI TNQV +
Sbjct: 254 LCRFLRGLQRIADIYGVAVIITNQVVA 280
>gi|440903014|gb|ELR53728.1| Meiotic recombination protein DMC1/LIM15-like protein, partial [Bos
grunniens mutus]
Length = 345
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 69 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 128
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
G GKTQL +C++ Q+ P G +++I TE+ F RL + + +
Sbjct: 129 AFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 186
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + ++G + +++IDSI +FR ++
Sbjct: 187 NAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRG 242
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 243 ELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 277
>gi|442535546|gb|AGC52846.1| Rad51, partial [Macrobiotus cf. harmsworthi EABP-2013]
Length = 375
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITE+ G GKTQ+C M ++ Q+ G LY
Sbjct: 133 IQITTGSKELDRLLNGGIETGSITEMFGEFRTGKTQICHTMAVTCQLPVDLGGGEGKCLY 192
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + E + D + Y D + L Q+ +E++ +
Sbjct: 193 IDTEGTFRPERLLAVAERYGMNGSDVMDNVAYARAYN-TDHQMALLVQAAAMMVESRYAL 251
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDK 213
+++DS ++R Y + R + L L+ + + V+ TNQV + + D
Sbjct: 252 LIVDSATALYRTDYTGRGELCARQMHLARFLRMLTRLADEFGVAVVITNQVVATV---DA 308
Query: 214 NIPAL 218
+P +
Sbjct: 309 MMPGV 313
>gi|294657730|ref|XP_460030.2| DEHA2E16742p [Debaryomyces hansenii CBS767]
gi|199432908|emb|CAG88286.2| DEHA2E16742p [Debaryomyces hansenii CBS767]
Length = 330
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNP------IDMTEIVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K+ K G P + +STGS++ D +L GG+ + IT
Sbjct: 56 GLSEVKVEKIKE-AAGKLMHSGFIPATVQAELRSRAFTLSTGSKQLDDVLGGGVSSMSIT 114
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G CGKTQLC +C++ Q+ + G V YI TE F R+ + E +
Sbjct: 115 EVFGEFRCGKTQLCHTLCVTAQLPKEMGGSEGKVAYIDTEGTFRPDRIRSIAERFQVDAD 174
Query: 121 KCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQR 176
C + I ++L L Q F + ++V+DSI FR Y+ + R
Sbjct: 175 ACLENISYARALNSEHQMELAEQLGLQ--FADGTYRLLVVDSIMACFRVDYSGRGELNDR 232
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L L+ + + V TNQV S
Sbjct: 233 QQKLNQHLSSLIRLAEDYNVAVFLTNQVQS 262
>gi|126277684|ref|XP_001370830.1| PREDICTED: DNA repair protein RAD51 homolog 1-like isoform 1
[Monodelphis domestica]
Length = 339
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G +Y
Sbjct: 100 IQITTGSKELDKLLQGGIETGSITEIFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMI 155
I TE F RL + E L+ D + + + L ++ + +E++ ++
Sbjct: 160 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 220 IVDSSTALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMF 279
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 280 AADPKKPIGG 289
>gi|256071033|ref|XP_002571846.1| DNA repair protein RAD51 [Schistosoma mansoni]
gi|353228592|emb|CCD74763.1| putative DNA repair protein RAD51 [Schistosoma mansoni]
Length = 338
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITEL G GKTQ+C + ++ Q+ G LY
Sbjct: 99 IQLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L+ D + Y ++ + + + E++ ++
Sbjct: 159 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNTDHQMELLINAAAMMSESRYALL 218
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 219 IVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGAAMF 278
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 279 SADPKKPIGG 288
>gi|255075467|ref|XP_002501408.1| Rad51 DNA recombinase 1 [Micromonas sp. RCC299]
gi|226516672|gb|ACO62666.1| Rad51 DNA recombinase 1 [Micromonas sp. RCC299]
Length = 344
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE------IVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K + K +G M + I+V+TG+ K D +L GG +G +T
Sbjct: 69 GLSEMKVEKLK-MAATKVVPLGFTTASMVQAVRQDTIMVTTGASKLDELLGGGFESGSLT 127
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G GKTQLC + ++ Q+ G +YI TE F RL + E +
Sbjct: 128 EIYGEFRTGKTQLCHTLAVTCQLPLDQGGAEGKAMYIDTEGTFRPQRLIAIAERFGMDPN 187
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTY 168
D + + L + +G + E + G+I++DS+ +FR Y
Sbjct: 188 AVLDNVAYAKAHNTEHQSELLVAAAGMMAEARFGVIIVDSVTNLFRTEY 236
>gi|425783624|gb|EKV21464.1| DNA repair protein RAD51, putative [Penicillium digitatum Pd1]
Length = 344
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 97 ISITTGSKRLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 157 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 217 VVDSATSLYRTDFNGRGELASRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 276
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 277 MFNPDPKKPIGG 288
>gi|335438064|ref|ZP_08560819.1| DNA repair and recombination protein RadB [Halorhabdus tiamatea
SARL4B]
gi|334893238|gb|EGM31455.1| DNA repair and recombination protein RadB [Halorhabdus tiamatea
SARL4B]
Length = 227
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+STG + D +L GG+ G +T++ G GKT L L +++V+ LY+ TE V
Sbjct: 5 ISTGCDAVDDLLGGGLERGAVTQIYGQPAAGKTNLAL--GAAVEVAAGGDSALYLDTEGV 62
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
R+ QL + K + +I +T + F + + + F ++V +IV+DS G
Sbjct: 63 -SIDRMEQLADARGDVD-KLASRIILTEAHTFAEQQEAVRDAEEF-GSQVDLIVLDSATG 119
Query: 163 IFR--NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R T ED RA R + H L L+ KH + V TNQV S
Sbjct: 120 FYRLERTEQEDGEALRAV-ARQITHLL-SLARKHDLAVAFTNQVFS 163
>gi|207346868|gb|EDZ73231.1| YDR004Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 264
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF C + I+ + + Q + + +
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 220
Query: 154 MIVIDSIA---------GIFRNTYAEDKYVQR-AHDMRDLAH 185
+++IDSI+ FR + Y+ R A ++ LAH
Sbjct: 221 LVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAH 262
>gi|50725218|dbj|BAD34152.1| Trad-like protein [Oryza sativa Japonica Group]
gi|50726165|dbj|BAD33684.1| Trad-like protein [Oryza sativa Japonica Group]
gi|125604686|gb|EAZ43722.1| hypothetical protein OsJ_28349 [Oryza sativa Japonica Group]
Length = 272
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+ TG + D++L GG+ G +TE++G S GKTQ+CL C + V+ G V+Y+ T +
Sbjct: 50 LPTGLQGVDALLGGGLRQGQLTEITGQSSSGKTQVCL--CSASHVAARQLGVVMYLDTSN 107
Query: 102 VFPTARLAQLCELSPLA---KPK------------CSDKIFITHCYEFI-DLKRTLESQS 145
F +R+A++ + P++ +PK C I +E + L+ +L+S+
Sbjct: 108 SFSPSRIARIVDGFPISLVREPKNVRLERVMSSIICKSVFDIFDLFEVLHQLELSLKSKV 167
Query: 146 GFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
NK+ +++IDSI+ I KY + M +A L +L+ +H + V+ TN +
Sbjct: 168 NNGGNKICLLIIDSISSILAPING-GKYPRGRSMMISVAMILKKLAYEHNLSVLVTNHMV 226
Query: 206 SAMTHSDKNIPALGLTYERAHDMR 229
+ + PALG +++ +R
Sbjct: 227 AG---NGAPKPALGESWKTVPHVR 247
>gi|169806553|ref|XP_001828021.1| DNA repair and recombination protein RAD51 [Enterocytozoon bieneusi
H348]
gi|161779161|gb|EDQ31186.1| DNA repair and recombination protein RAD51 [Enterocytozoon bieneusi
H348]
Length = 337
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D +L GGI +G ITE+ G GK+QLC + ++ Q+ + + G +Y
Sbjct: 97 VYITTGSTELDKLLNGGIESGTITEVFGEFRTGKSQLCHTVAVTCQLPKENGGGNGKCMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F T RL + E L + D I + L S + E K ++
Sbjct: 157 IDTEGTFRTERLIPIAERLGLDPNEVLDNISYARAFNSDHQNNLLIHASAMMSETKYAVL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R Y + R + L L+ + I VI TNQV +
Sbjct: 217 IVDSATSLYRTDYNGRGELSARQISLARFLRSLTNLAETYGIAVIITNQVVA 268
>gi|300122361|emb|CBK22933.2| unnamed protein product [Blastocystis hominis]
gi|300122364|emb|CBK22936.2| unnamed protein product [Blastocystis hominis]
gi|300122845|emb|CBK23852.2| unnamed protein product [Blastocystis hominis]
Length = 333
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STG ++ D+IL GG+ G +TEL G GKTQLC +C+ Q+ G LYI
Sbjct: 97 ISTGCKELDAILGGGMETGSLTELYGEFRTGKTQLCHTLCVICQLPVEQGGGEGKALYID 156
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIV 156
TE F RLAQ+ + L D + Y + + L Q+G + E++ +++
Sbjct: 157 TEGTFRPERLAQISQRFGLDPNDVMDNVAYARAYNS-EHQMQLLMQAGALMSESRFALVI 215
Query: 157 IDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHEL 190
+DS +FR Y + + ++LA +L L
Sbjct: 216 VDSATALFRTDYTGRGEL--STRQQNLAQFLRGL 247
>gi|66472867|ref|NP_001018618.1| meiotic recombination protein DMC1/LIM15 homolog [Danio rerio]
gi|63852092|dbj|BAD98462.1| RecA homolog Dmc1 [Danio rerio]
Length = 342
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNP-IDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K FQ I ++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + V++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDTENTFRPERLKDIADRFNVDHEA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|190338308|gb|AAI63218.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Danio rerio]
Length = 342
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNP-IDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K FQ I ++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + V++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDTENTFRPERLKDIADRFNVDHDA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|125562706|gb|EAZ08086.1| hypothetical protein OsI_30353 [Oryza sativa Indica Group]
Length = 280
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 23/204 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+ TG + D++L GG+ G +TE++G S GKTQ+CL C + V+ G V+Y+ T +
Sbjct: 58 LPTGLQGVDALLGGGLRQGQLTEITGQSSSGKTQVCL--CSASHVAARQLGVVMYLDTSN 115
Query: 102 VFPTARLAQLCELSPLA---KPK------------CSDKIFITHCYEFI-DLKRTLESQS 145
F +R+A++ + P++ +PK C I +E + L+ +L+S+
Sbjct: 116 SFSPSRIARIVDGFPISLVREPKNVRLERVMSSIICKSVFDIFDLFEVLHQLELSLKSKV 175
Query: 146 GFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
NK+ +++IDSI+ I KY + M +A L +L+ +H + V+ TN +
Sbjct: 176 NNGGNKICLLIIDSISSILAPING-GKYPRGRSMMISVAMILKKLAYEHNLSVLVTNHMV 234
Query: 206 SAMTHSDKNIPALGLTYERAHDMR 229
+ + PALG +++ +R
Sbjct: 235 AG---NGAPKPALGESWKTVPHVR 255
>gi|358332289|dbj|GAA50958.1| DNA repair protein RAD51 [Clonorchis sinensis]
Length = 341
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITEL G GKTQ+C + ++ Q+ G LY
Sbjct: 102 IQLTTGSKELDKLLQGGIETGSITELFGEFRTGKTQICHTLAVTCQLPIDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L+ D + Y ++ + + + E++ ++
Sbjct: 162 IDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNTDHQMELLINAAAMMSESRYALL 221
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
V+DS ++R Y+ + R + L L+ + + V+ TNQV +AM
Sbjct: 222 VVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGAAMF 281
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 282 TADPKKPIGG 291
>gi|302660598|ref|XP_003021977.1| hypothetical protein TRV_03925 [Trichophyton verrucosum HKI 0517]
gi|291185899|gb|EFE41359.1| hypothetical protein TRV_03925 [Trichophyton verrucosum HKI 0517]
Length = 388
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 140 ICITTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 199
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 200 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 259
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 260 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 319
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 320 MFNPDPKKPIGG 331
>gi|403282995|ref|XP_003932915.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Saimiri boliviensis boliviensis]
Length = 339
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 11 GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAG 61
G E +V+K+K+ K AF+ + ++V ++TGS++FD +L GGI +
Sbjct: 63 GLSEAKVDKIKEAANKLIEPGILTAFEYSEK----RKMVFHITTGSQEFDKLLGGGIESM 118
Query: 62 GITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPL 117
ITE G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 119 AITEAFGEFRTGKTQLSHTLCVTAQLPGAGDYPGGKIIFIDTENTFRPDRLRDIADRFNV 178
Query: 118 AKPKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA- 169
D + Y E +D + + G + +++IDSI +FR ++
Sbjct: 179 DHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEPGIFK----LLIIDSIMALFRVDFSG 234
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + + TNQ+T+
Sbjct: 235 RGELAERQQKLAQMLSRLQKISEEYNVAIFVTNQMTA 271
>gi|119719653|ref|YP_920148.1| Rad51-like [Thermofilum pendens Hrk 5]
gi|119524773|gb|ABL78145.1| Rad51-like protein [Thermofilum pendens Hrk 5]
Length = 250
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+STG D +L+GGI G ITE G G GKTQ+C Q+ + +Q+ + G+ LY+
Sbjct: 30 ISTGVRSLDDLLEGGIEVGSITEFIGEFGAGKTQICHQLSVMVQLPKDKGGLNARALYVD 89
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVGMIVI 157
TE F R+ Q+ L K + I Y L+ L ++ + ++ VG++V+
Sbjct: 90 TEGTFRPERIVQIARARGLDPEKTLENIIYARAYSLGGLEELLSKALAEVVKGDVGLVVL 149
Query: 158 DSIAGIFRNT 167
D + R +
Sbjct: 150 DEATRLVRAS 159
>gi|354472143|ref|XP_003498300.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cricetulus
griseus]
Length = 387
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
+++ +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 ELSPAFLSTTLSALDKALHGGVACGSLTEITGPPGCGKTQFCIMMSVLATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----------HCYEFIDLKRTLE 142
V+YI TES F RL ++ E +K+ + C + +LE
Sbjct: 137 TVVYIDTESAFTAERLVEIAESRFPLYFNTEEKLLLMSSKVHLHRELSCEAVLQRLESLE 196
Query: 143 SQSGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
+ I V ++++DSIA + R + + +R + A L L+ + + VI
Sbjct: 197 EE--IISKGVKLVIVDSIASVVRKEFDPQLQGNIKERNKFLAKQASLLKYLAEEFSLPVI 254
Query: 200 CTNQVTSAMTHSDKNIPALGLTYERAHDM 228
TNQ+T TH +P+ A D+
Sbjct: 255 LTNQIT---THLSGALPSQADLVSPADDL 280
>gi|435852388|ref|YP_007313974.1| DNA repair and recombination protein RadA [Methanomethylovorans
hollandica DSM 15978]
gi|433663018|gb|AGB50444.1| DNA repair and recombination protein RadA [Methanomethylovorans
hollandica DSM 15978]
Length = 325
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 19/198 (9%)
Query: 28 AFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSL 85
F+ G ++ ++V +STG ++F+ I+ GGI + ITE+ G G GKTQL Q+ +++
Sbjct: 65 GFETGDVVMERRKLVGKLSTGCKEFNDIMGGGIDSQAITEVYGEFGSGKTQLGHQLAVNV 124
Query: 86 QVSQPHKG----VLYICTESVFPTARLAQLCE-LSPLAKPKCSDKIFITHCYE------- 133
Q+ Q G V+ I TE+ F R+ Q+ + LS L + F+ H +
Sbjct: 125 QLPQEKGGLNGSVIMIDTENTFRPERIKQMVDGLSELYGEDYDYEEFLKHIHVARAYNSN 184
Query: 134 ----FIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLH 188
+D L +Q + V ++++DS+ FR Y R + H +
Sbjct: 185 HQILLVDAASELANQLKDSDKPVRLLIVDSLTAHFRAEYIGRGTLADRQQKLNKHLHDIQ 244
Query: 189 ELSIKHRIVVICTNQVTS 206
+ VV+ TNQV S
Sbjct: 245 RFGDLNNAVVLVTNQVMS 262
>gi|258570189|ref|XP_002543898.1| DNA repair protein RAD51 [Uncinocarpus reesii 1704]
gi|237904168|gb|EEP78569.1| DNA repair protein RAD51 [Uncinocarpus reesii 1704]
Length = 348
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 100 ICITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 160 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 220 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 279
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 280 MFNPDPKKPIGG 291
>gi|332020430|gb|EGI60850.1| DNA repair protein RAD51-like protein 1 [Acromyrmex echinatior]
Length = 340
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+ ++TGS++ D +L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 100 VYITTGSKELDKLLGGGIETGSITEIFGEFRSGKSQLCHTLAVNCQLPISMGGAEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE+ F RL + E + D + + K L + + E + ++
Sbjct: 160 IDTENTFRPERLIAVAEKYKINGQSVLDNVACARAFNTDHQTKLLLLASAMMTEARYALL 219
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS G++R Y + R + L L+ +H I V+ TNQV ++M
Sbjct: 220 IVDSATGLYRTDYTGRGELSARQVHLGRFLRMLLRLADEHGIAVVITNQVVAQVDGAASM 279
Query: 209 THSDKNIPALG 219
D+ P G
Sbjct: 280 FGGDQKKPIGG 290
>gi|422295451|gb|EKU22750.1| dna repair protein rad51, partial [Nannochloropsis gaditana
CCMP526]
Length = 676
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS+ D++L GG+ G +TE+ G GKTQLC +C++ Q+ G +Y
Sbjct: 49 IQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMY 108
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L D + + L+ S + E++ ++
Sbjct: 109 IDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALV 168
Query: 156 VIDSIAGIFRNTYA-----EDKYVQRAHDMRDLAHYLHELSI 192
V+DS +FR Y ++ +Q A +R L E +
Sbjct: 169 VVDSATALFRTDYCGRGELSERQMQLAQFLRQLTRMSEEFGV 210
>gi|224107947|ref|XP_002314664.1| predicted protein [Populus trichocarpa]
gi|222863704|gb|EEF00835.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 14/201 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV-SQPHKG---VLY 96
I ++TGS+ D +L GGI ITE G GKTQL +C+S Q+ +Q H G V Y
Sbjct: 105 IRITTGSQALDELLGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTQMHGGNGKVAY 164
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVG 153
I TE F R+ + E + D I Y + +L L ++ E
Sbjct: 165 IDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAK--MSEEPYR 222
Query: 154 MIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AM 208
++++DS+ +FR + + +R + + L +++ + + V TNQV + M
Sbjct: 223 LLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGM 282
Query: 209 THSDKNIPALGLTYERAHDMR 229
SD PA G A +R
Sbjct: 283 FISDPKKPAGGHVLAHAATIR 303
>gi|154279522|ref|XP_001540574.1| meiotic recombination protein dmc1 [Ajellomyces capsulatus NAm1]
gi|150412517|gb|EDN07904.1| meiotic recombination protein dmc1 [Ajellomyces capsulatus NAm1]
Length = 358
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 28/232 (12%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + +I STGS++FDSIL G
Sbjct: 54 LLKIRGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVKI--STGSKQFDSILAG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVMAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA 169
E + + I ++L TL + F+ + +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENIAYARALNSEHQLELLNTLSKE--FVGGEYRLLIIDSIMNCFRVDYC 229
Query: 170 -----EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIP 216
D+ + + LAH E ++ ++++C ++ ++ + P
Sbjct: 230 GRGELADRQQKLNQFLMKLAHMAEEFNVC--VLMVCASKNRESLALGIRAYP 279
>gi|334310651|ref|XP_001378467.2| PREDICTED: DNA repair protein RAD51 homolog 2-like [Monodelphis
domestica]
Length = 268
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 50 FDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPT 105
D L GG+ G +TE++G SGCGKTQ C+ M + + G V+YI TES F
Sbjct: 90 LDEALHGGVACGSLTEITGPSGCGKTQFCMMMSVLATLPTGMGGLEGAVIYIDTESAFSA 149
Query: 106 ARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIENKVGMIVI 157
RL ++ E + +K+ H Y+ + LKR + I N+V +++I
Sbjct: 150 ERLIRIAEFRFPSFFNTEEKLLSMSSKIHLYKELTCNEVLKRIESLEEEIISNRVKLLII 209
Query: 158 DSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
DS+A + R +T + +R++ + A L L+ + I+VI
Sbjct: 210 DSVASVVRKEFDTQLQGNMRERSNFLAREASLLKYLAEEFSIIVI 254
>gi|294495001|ref|YP_003541494.1| DNA repair and recombination protein RadB [Methanohalophilus mahii
DSM 5219]
gi|292666000|gb|ADE35849.1| DNA repair and recombination protein RadB [Methanohalophilus mahii
DSM 5219]
Length = 225
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 8/183 (4%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++++G + D +L GG G +T++ G SG GKT LCLQ L++ +K + + TE+
Sbjct: 7 LLTSGCKPIDELLGGGFEPGVVTQIYGESGSGKTNLCLQ--LAVYCVNNNKKAILVDTEA 64
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
+ P R Q+ + + + I I + F + + +G+I++DS
Sbjct: 65 ISP-ERFRQIAGENAR---EIAQNIIIYEPHSFEEQYSAIHEIEKISAQNIGLIIVDSAT 120
Query: 162 GIFR-NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGL 220
+R E+K ++ ++ + YLH L+ K IVV+ TNQV S + + K P G
Sbjct: 121 AYYRFGLEDEEKSIRTRRELANQIGYLHGLARKRGIVVVITNQVYSDIG-TGKLKPVGGS 179
Query: 221 TYE 223
T E
Sbjct: 180 TVE 182
>gi|302496969|ref|XP_003010485.1| hypothetical protein ARB_03186 [Arthroderma benhamiae CBS 112371]
gi|291174028|gb|EFE29845.1| hypothetical protein ARB_03186 [Arthroderma benhamiae CBS 112371]
Length = 257
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 9 ICITTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 68
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 69 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 128
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 129 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 188
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 189 MFNPDPKKPIGG 200
>gi|302348270|ref|YP_003815908.1| DNA repair and recombination protein radA [Acidilobus
saccharovorans 345-15]
gi|302328682|gb|ADL18877.1| DNA repair and recombination protein radA [Acidilobus
saccharovorans 345-15]
Length = 326
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 30/182 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS+ D +L GGI ITE G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 91 ITTGSKALDDLLGGGIETKQITEFFGEFGTGKTQICHQLSVNVQLPEDKGGLNGKAVYID 150
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIF-------------ITHCYEFIDLKRTLESQS 145
TE F R+ Q+ L K D I+ + ++ +D
Sbjct: 151 TEGTFRWERIEQMARGLGLDPDKVMDNIYWIRAINSHHQMAIVDQLFDMLD--------- 201
Query: 146 GFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
++ + ++V+DS+ FR + + R + H L L+ + + V+ TNQV
Sbjct: 202 ---KDNIRLVVVDSLTSHFRAEFPGRENLAARQQLLNRHLHQLMRLAEVYDVAVVVTNQV 258
Query: 205 TS 206
+
Sbjct: 259 MA 260
>gi|401840270|gb|EJT43158.1| RAD57-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 448
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+ G+ +YI T
Sbjct: 88 TTADVAIDELLSGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEAEGGLAGKCVYITT 147
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF +C + I+ + + Q + +
Sbjct: 148 EGDLPTQRLESMLSSRPAYEKLGISQSNIFTVNCNDLINQEHIINVQLPILLERSRGAIK 207
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRD----LAHYLHELSIKHRIVVICTNQV 204
++++DSI+ R ++K + + + ++ +A L L+ + + V+ NQV
Sbjct: 208 LVIVDSISHHLR-VELQNKSFRESQENKNYLDKMAEKLQILAHDYSLAVVVANQV 261
>gi|225559662|gb|EEH07944.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
gi|325089671|gb|EGC42981.1| uvsC [Ajellomyces capsulatus H88]
Length = 348
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D I Y + L S + E + ++
Sbjct: 161 IDTEGTFRPTRLLAVAQRYGLVGDEVLDNIAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + I V+ TNQV SA
Sbjct: 221 IVDSATALYRTDFSGRGELSSRQNHLAKFMRKLRTLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|403413652|emb|CCM00352.1| predicted protein [Fibroporia radiculosa]
Length = 340
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+E+V ++TGS+ DS+L GGI G ITEL G GK+Q+C + ++ Q+ G
Sbjct: 95 SELVHITTGSKNLDSLLGGGIETGSITELFGEFRTGKSQICHTLAVTCQLPVDMGGGEGK 154
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
LYI TE F RL + E L + D + Y + L S S + E++
Sbjct: 155 CLYIDTEGTFRPVRLLAVAERLGLNGEEVLDNVAYARAYNADHQYQLLTSASALMSESRF 214
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDS ++R + + R + L L+ + I V+ +NQV S
Sbjct: 215 CLLIIDSCTALYRTDFNGRGELSARQAHLGKFLRTLQRLADEFGIAVVMSNQVMS 269
>gi|301101197|ref|XP_002899687.1| DNA repair protein XRCC3 [Phytophthora infestans T30-4]
gi|262102689|gb|EEY60741.1| DNA repair protein XRCC3 [Phytophthora infestans T30-4]
Length = 277
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 32/214 (14%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LY 96
+V+ +G + D +L GG +G +TE+ G + GKTQLCLQ+ L + + G+ Y
Sbjct: 15 VVLPSGCDSIDELLHGGFRSGILTEICGEASAGKTQLCLQLLLQCCLPRSLGGLQGTACY 74
Query: 97 ICTESVFPTARLAQLCEL----------------SPLAKPKCS-----DKIFITHCYEFI 135
ICTE V RL L ++ A PK S D IF+ Y
Sbjct: 75 ICTEGVGSVKRLHDLAQVYAKRYGGVMGIGAKRKRGEAVPKLSGSDFLDGIFVEQLYTVD 134
Query: 136 DLKRTLESQSGFI--ENKVGMIVIDSIAGIFR--NTYAEDKYVQRAHDMRDLAHYLHELS 191
DL ++++ + E ++V+DS+A +FR +T + + +R+ M +A+ + LS
Sbjct: 135 DLMDLVQARLPMLLAEQNTKLVVLDSVAAVFRLESTSSVKEAAERSRTMFHMANCMRILS 194
Query: 192 IKHRIVVICTNQVTSAM-THSDKN--IPALGLTY 222
++ +V + TNQVT S+ N PALGL++
Sbjct: 195 DQYGVVFVVTNQVTGDFDPRSNGNGLRPALGLSW 228
>gi|169623440|ref|XP_001805127.1| hypothetical protein SNOG_14961 [Phaeosphaeria nodorum SN15]
gi|160704983|gb|EAT77504.2| hypothetical protein SNOG_14961 [Phaeosphaeria nodorum SN15]
Length = 1641
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 108 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 167
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F R + L+ + D + Y D + L +Q+ E + +
Sbjct: 168 IDTEGTFRPVRCLAVANRFGLSGEEVLDNVAYARAYN-SDHQLELLNQAAQMMTETRFSL 226
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R +A + R + L L+ + I V+ TNQV S
Sbjct: 227 LIVDSATSLYRTDFAGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 286
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 287 AMFNPDPKKPIGG 299
>gi|57642166|ref|YP_184644.1| DNA repair and recombination protein RadB [Thermococcus
kodakarensis KOD1]
gi|13878674|sp|P95547.2|RADB_PYRKO RecName: Full=DNA repair and recombination protein RadB
gi|75766445|pdb|2CVF|A Chain A, Crystal Structure Of The Radb Recombinase
gi|75766446|pdb|2CVF|B Chain B, Crystal Structure Of The Radb Recombinase
gi|75766447|pdb|2CVH|A Chain A, Crystal Structure Of The Radb Recombinase
gi|75766448|pdb|2CVH|B Chain B, Crystal Structure Of The Radb Recombinase
gi|6009935|dbj|BAA11830.2| Pk-rec [Thermococcus kodakarensis KOD1]
gi|57160490|dbj|BAD86420.1| RadB recombinase [Thermococcus kodakarensis KOD1]
Length = 220
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++STG++ DS+L GG G +T++ G GKT L LQ L K V Y+ TE
Sbjct: 1 MLSTGTKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGL-----LSGKKVAYVDTEG 55
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
F RL Q+ E L + + + +F + +R + S +++ ++V+DSI
Sbjct: 56 GFSPERLVQMAETRGLNPEEALSRFILFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSIT 115
Query: 162 GIFRNTYAEDKYVQRAHDMRDLAHYLHEL---SIKHRIVVICTNQV 204
+R AE+ R+ + +L+ L L + KH I VI NQV
Sbjct: 116 AHYR---AEE---NRSGLIAELSRQLQVLLWIARKHNIPVIVINQV 155
>gi|432328525|ref|YP_007246669.1| DNA repair and recombination protein RadA [Aciduliprofundum sp.
MAR08-339]
gi|432135234|gb|AGB04503.1| DNA repair and recombination protein RadA [Aciduliprofundum sp.
MAR08-339]
Length = 330
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS +FD +L GG+ ITE G G GKTQ+ Q+ +++Q+ G+ +YI
Sbjct: 98 LTTGSPEFDRLLGGGLETQAITEFFGEFGSGKTQIMHQLAVNVQLPADKGGLEGHAIYID 157
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY----EFIDLKRTLESQSGFIENKVGM 154
TE+ F R+ Q+ E L KI + + + + + + +E E V +
Sbjct: 158 TENTFRPERIKQMAEALGLDPIDSLKKIHVARAFNSNHQILLVDKAMELAK---EYPVRL 214
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS--AMTHS 211
+++DS+ FR Y +R + H L + + + VV TNQV + M
Sbjct: 215 LIVDSLTAHFRAEYVGRGSLAERQQLLNKHMHDLLKFADLNNAVVAVTNQVAANPGMMFG 274
Query: 212 DKNIPALG 219
D P G
Sbjct: 275 DPTQPIGG 282
>gi|365761557|gb|EHN03202.1| Rad57p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 448
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+ G+ +YI T
Sbjct: 88 TTADVAIDELLNGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEAEGGLAGKCVYITT 147
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI----ENKVG 153
E PT RL + P + IF +C + I+ + + Q + +
Sbjct: 148 EGDLPTQRLESMLSSRPAYEKLGISQSNIFTVNCNDLINQEHIINVQLPILLERSRGAIK 207
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRD----LAHYLHELSIKHRIVVICTNQV 204
++++DSI+ R ++K + + + ++ +A L L+ + + V+ NQV
Sbjct: 208 LVIVDSISHHLR-VELQNKSFRESQENKNYLDKMAEKLQILAHDYSLAVVVANQV 261
>gi|408404276|ref|YP_006862259.1| DNA repair and recombination protein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408364872|gb|AFU58602.1| DNA repair and recombination protein [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 335
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYIC----- 98
STG++ D +L GG+ ITE G G GK+Q+C +C++ Q QP +
Sbjct: 88 STGAKALDELLLGGVETQAITEFYGEFGSGKSQICHTLCVTAQ--QPVEEGGLGGGVILI 145
Query: 99 -TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIV 156
TE F R+ Q+ L + ++ I Y L+ ++S +I++ K MI+
Sbjct: 146 DTEGTFRPERVDQIARARGLNPEEILKRVAICKAYNSSHLELIVKSMGKYIDDFKAKMII 205
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMT--HSDK 213
IDSI + R ++ R + + H L ++ + I +I TNQV S D
Sbjct: 206 IDSIISLHRAEFSGRGTLADRQQRLNSIMHKLVRIAEIYNIAIIVTNQVQSTPDTFFGDP 265
Query: 214 NIPALG 219
PA G
Sbjct: 266 TKPAGG 271
>gi|255940094|ref|XP_002560816.1| Pc16g04650 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585439|emb|CAP93135.1| Pc16g04650 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 97 ISITTGSKRLDTLLGGGVETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 157 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 217 VVDSATSLYRTDFNGRGELASRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 276
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 277 MFNPDPKKPIGG 288
>gi|258597225|ref|XP_001347762.2| Rad51 homolog [Plasmodium falciparum 3D7]
gi|25991345|gb|AAN76809.1|AF452489_1 recombinase Rad51 [Plasmodium falciparum]
gi|254832605|gb|AAN35675.2| Rad51 homolog [Plasmodium falciparum 3D7]
Length = 350
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
G E + K+K K+ N ID + I +TGS++ D++LKGGI GGITE
Sbjct: 75 GISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGGIETGGITE 134
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GK+QLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 135 LFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAKRYGLHPTD 194
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVIDSIAGIFRNTY-AEDKYVQRAHD 179
C + I Y L S + + + ++++DS ++R+ Y + R
Sbjct: 195 CLNNIAYAKAYNCDHQTELLIDASAMMADARFALLIVDSATALYRSEYIGRGELANRQSH 254
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + + VI TNQV +
Sbjct: 255 LCRFLRGLQRIADIYGVAVIITNQVVA 281
>gi|337743291|gb|AEI73142.1| DMC1 [Kryptolebias marmoratus]
Length = 265
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 22/192 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ +++I
Sbjct: 26 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYLGGKIIFID 85
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENKV 152
TE+ F RL + + + D + Y E +D + G +
Sbjct: 86 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---F 142
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+++IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 143 KLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD---- 198
Query: 212 DKNIPALGLTYE 223
P G+T++
Sbjct: 199 ----PGAGMTFQ 206
>gi|241748274|ref|XP_002405692.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
gi|215505939|gb|EEC15433.1| DNA repair protein RAD51/RHP55, putative [Ixodes scapularis]
Length = 319
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYIC 98
T V STGS K D ++ GG+ G ITE+ GAS GKTQLC + + V H GVLY+
Sbjct: 78 TTAVFSTGSRKVDDVIGGGVFTGQITEIVGASTSGKTQLCHSLT-AHAVIDSHFGVLYVD 136
Query: 99 TESVFPTARLAQ-LCELSPLAKPKCSDKIFITHCY----------EFID-LKRTLESQSG 146
T S F R+ Q L AKP D++ C+ + +D ++ +LE ++
Sbjct: 137 TLSCFSAERIRQILSSAQQSAKP---DQLMQRVCHIGIRDIGELVQLVDQIRNSLERRAN 193
Query: 147 FIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHR 195
+ MIV+DS+ D+YV+ + LA ++ + R
Sbjct: 194 SELASIKMIVVDSLKAAVSPVLTGDQYVEGLGLLAHLAIAFQYIAARFR 242
>gi|159119566|ref|XP_001710001.1| Dmc1b [Giardia lamblia ATCC 50803]
gi|30578213|gb|AAP35103.1|AF485824_1 DMC1-B [Giardia intestinalis]
gi|33667820|gb|AAQ24510.1| Dmc1b [Giardia intestinalis]
gi|157438119|gb|EDO82327.1| Dmc1b [Giardia lamblia ATCC 50803]
Length = 368
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 22/228 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+ + + K F G + + V +STG F+++L GG+ ITE
Sbjct: 94 GISEAKVDKILSVATEMCGKTFITGSEALKKRQQVKRLSTGCADFNALLGGGVETMSITE 153
Query: 66 LSGASGCGKTQLC--LQMCLSLQVSQPHKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GKTQLC L + L VS+ G +YI TE F ++A + E L K
Sbjct: 154 VFGEFRTGKTQLCHTLAVTAQLPVSKGGGGGKTVYIDTEGTFRPEKVAPIAERFGLNPKK 213
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGF----IENKVGMIVIDSIAGIFRNTY-AEDKYVQR 176
D I + Y ++ +E + +EN+ ++++DS+ +FR + + R
Sbjct: 214 ALDNIMVARVYTH---EQQIECITALPKLMVENQFSLVIVDSLTALFRVDFTGRGELADR 270
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
+ L +L+ + + V TNQV +AM +D P G
Sbjct: 271 QQKLGQHLSGLAKLADEFNLAVFVTNQVMAQVDGAAMFTADPKKPIGG 318
>gi|195399463|ref|XP_002058339.1| GJ16038 [Drosophila virilis]
gi|194150763|gb|EDW66447.1| GJ16038 [Drosophila virilis]
Length = 245
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 29 FQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
++ KN ++TG D L+GGI G + EL G G GKTQLC+++CL++Q+
Sbjct: 3 YKTAKNLKAEKSPTITTGITALDKCLRGGIRPGKVYELVGKPGTGKTQLCMKLCLNVQIP 62
Query: 89 QPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSD------KIFITHCYEFIDLK 138
+ G+ LY T F ARL +L + A+ +C+ + + Y ++D +
Sbjct: 63 RYACGLASKALYFDTRKDFNPARLKELAD-DLAARLRCTSISAPTATQMLQNVY-YVDCR 120
Query: 139 RTLESQSGFI--------ENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHD-MRDLAHY 186
T + +G + E + +I++DSI+ R N + + HD MR L
Sbjct: 121 NTAQLVAGLLNCHKYLEKEPNIKLIIVDSISFAIRMVNNVSDRTELLMEVHDGMRKL-QL 179
Query: 187 LHELSIKHRIVVICTNQ 203
+H+L+ VI NQ
Sbjct: 180 MHDLAF-----VITNNQ 191
>gi|326476219|gb|EGE00229.1| DNA repair protein RAD51 [Trichophyton tonsurans CBS 112818]
gi|326480838|gb|EGE04848.1| DNA repair protein RAD51 [Trichophyton equinum CBS 127.97]
Length = 349
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 221 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|327299920|ref|XP_003234653.1| DNA repair protein RAD51 [Trichophyton rubrum CBS 118892]
gi|326463547|gb|EGD89000.1| DNA repair protein RAD51 [Trichophyton rubrum CBS 118892]
Length = 349
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 221 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|261334823|emb|CBH17817.1| RAD51 protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 240
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYI 97
+V TGS + D +L GGI G ITEL G GKTQ C +C++ Q+ G LYI
Sbjct: 1 MVPTGSREVDKLLGGGIEVGSITELFGEFRTGKTQFCHTLCVTCQLPLSQGGGEGMALYI 60
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMIV 156
TE F RL + E L + + Y ++ L++ + E++V +IV
Sbjct: 61 DTEGTFRPERLVAVAERYSLDPEAVLENVACARAYNTDHQQQLLLQASATMAEHRVAIIV 120
Query: 157 IDSIAGIFRNTY 168
+DS ++R Y
Sbjct: 121 VDSATALYRTDY 132
>gi|300708611|ref|XP_002996481.1| hypothetical protein NCER_100414 [Nosema ceranae BRL01]
gi|239605787|gb|EEQ82810.1| hypothetical protein NCER_100414 [Nosema ceranae BRL01]
Length = 332
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 16/177 (9%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VL 95
+ ++TGS + D +L GG +G ITE+ G GKTQLC + ++ Q+ P +G +
Sbjct: 92 VYLTTGSSELDKLLNGGFESGSITEVFGEFRTGKTQLCHTVAVTCQLP-PEQGGASGKAM 150
Query: 96 YICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE-NKVGM 154
YI TE F + R+ + E L + I Y + L S + +K +
Sbjct: 151 YIDTEGTFRSERIFPIAERYGLNPEDVLENISYARAYNSDHQSQLLVQASALMSTSKYSV 210
Query: 155 IVIDSIAGIFRNTYAED-----KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++IDS ++R ++ + + A +RDL + L+ +++ VI TNQV S
Sbjct: 211 LIIDSATALYRTDFSGRGELGARQISLARYLRDLVN----LAETYQVAVIITNQVVS 263
>gi|354505335|ref|XP_003514726.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Cricetulus griseus]
Length = 340
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 20/178 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG------VLY 96
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ P G +++
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQL--PGAGGYSGGKIIF 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY------EFID-LKRTLESQSGFIE 149
I TE+ F RL + + + D + Y E +D + ++G +
Sbjct: 159 IDTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK 218
Query: 150 NKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 219 ----LLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|71028890|ref|XP_764088.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351042|gb|EAN31805.1| hypothetical protein, conserved [Theileria parva]
Length = 286
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 105/238 (44%), Gaps = 29/238 (12%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQ----PHKGVLYICTES 101
G ++ D L GG+ G + E+ G SG GKTQ L + + ++ VLYI T
Sbjct: 31 GVKEIDQALNGGLLLGKVCEIYGPSGSGKTQFALSLTSEVLINNLIHSKDYVVLYIYTNG 90
Query: 102 VFPTARLAQLC-----ELSPLAKP-------KCSDKIFITHCYEFIDLKRTLESQ-SGFI 148
FP RL ++ + L K + +++ + +L T S+ +
Sbjct: 91 TFPIERLNEILRSKYEDAKGLIKADENFNTSQLLKNLYVEKVTDNDELYFTFTSKLEEML 150
Query: 149 ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++ V +IVIDSIA +FR E + QR + + + + +S ++ ++++ NQ +
Sbjct: 151 QHNVKLIVIDSIAALFRTVQNESYHGQRINSITKVGLIMKRISHEYNLLILAINQASGVF 210
Query: 209 THSDKNI--------PALGLTYERAHDMRDLAHYLHE----ISIKHWIVVICTNQVTS 254
S+ PALG +ER + R L + I+H+ V+ +N ++
Sbjct: 211 NLSNIPFLNPRSGIKPALGEAWERCINSRILVTRRRDQRFNREIRHFQVIFSSNSPST 268
>gi|424513661|emb|CCO66283.1| RAD51C protein [Bathycoccus prasinos]
Length = 381
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 47/232 (20%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HK 92
+ I + T + D IL GG+ G ITE GA G GKTQ+ +Q+ +S+Q+ + ++
Sbjct: 109 EQERIPLMTFCAQVDGILGGGVQTGEITEFCGAPGVGKTQIGMQLAVSVQLPKEFFCGNE 168
Query: 93 G-VLYICTESVFPTARLAQLCE-LSPLAKPKCSD-------------------------- 124
G +Y+ TE F R CE ++ A+ K +
Sbjct: 169 GECVYVDTEGSFTCDR----CEDMAIGARRKLEERVQEMRCSEEERREYEECLESNMFSV 224
Query: 125 -----KIFITHCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRA 177
+I + C+E +L L+ F++ KV ++V+DSIA FR + D RA
Sbjct: 225 DSILKRIHVFRCHEVTELLACLDHMPEFVKEHPKVKLVVVDSIAFHFRQDF--DDMALRA 282
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMR 229
+ + L L+ KH + V+ NQ T+ + PALG +Y A R
Sbjct: 283 SILAKTTNNLMSLAKKHELAVVTINQATT--KPGGRLAPALGESYAHAATTR 332
>gi|429216262|ref|YP_007174252.1| DNA repair and recombination protein RadA [Caldisphaera lagunensis
DSM 15908]
gi|429132791|gb|AFZ69803.1| DNA repair and recombination protein RadA [Caldisphaera lagunensis
DSM 15908]
Length = 327
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 22 DLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM 81
D+K + A ++ K +++ +I +TGS+ D +L GGI +TE G G GKTQ+C +
Sbjct: 74 DIKFRTALELKKERLNIHKI--TTGSKSLDDLLGGGIETRDMTEFFGEYGTGKTQICHAL 131
Query: 82 CLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT------HC 131
+++Q+ + G+ +YI TE F R+ Q+ L K + I+ H
Sbjct: 132 AVNVQLPEDKGGLNAKAVYIDTEGTFRWERIEQIARGLNLDPDKVMENIYWIRAVNSHHQ 191
Query: 132 YEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHEL 190
+D + S+ + V ++++DS+ FR + + R + H L L
Sbjct: 192 MAIVDQLYDMLSK-----DNVKLVIVDSLTSHFRAEFPGRENLAMRQQLLNKHLHQLIRL 246
Query: 191 SIKHRIVVICTNQVTS 206
S + I V+ TNQV +
Sbjct: 247 SEIYDIAVVVTNQVMA 262
>gi|19114794|ref|NP_593882.1| RecA family recombinase Rhp51 [Schizosaccharomyces pombe 972h-]
gi|397843|dbj|BAA02963.1| SpRad51 [Schizosaccharomyces pombe]
gi|7708593|emb|CAB90141.1| RecA family recombinase Rhp51 [Schizosaccharomyces pombe]
Length = 365
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L+GG+ G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 122 ITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 181
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y L+ + + E++ ++
Sbjct: 182 IDTEGTFRPVRLLAVADRYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFSLL 241
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L L+ + I V+ TNQV +
Sbjct: 242 VVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVA 293
>gi|315053028|ref|XP_003175888.1| DNA repair protein RAD51 [Arthroderma gypseum CBS 118893]
gi|311341203|gb|EFR00406.1| DNA repair protein RAD51 [Arthroderma gypseum CBS 118893]
Length = 349
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 221 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|296815918|ref|XP_002848296.1| DNA repair protein RAD51 [Arthroderma otae CBS 113480]
gi|238841321|gb|EEQ30983.1| DNA repair protein RAD51 [Arthroderma otae CBS 113480]
Length = 350
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ICITTGSKQLDTLLAGGIETGSITELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 162 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 221
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + + L L+ + + V+ TNQV SA
Sbjct: 222 IVDSATSLYRTDFSGRGELSSRQNHLARFMRTLQRLADEFGVAVVITNQVVAQVDGGPSA 281
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 282 MFNPDPKKPIGG 293
>gi|221102981|ref|XP_002169171.1| PREDICTED: DNA repair protein RAD51 homolog A-like [Hydra
magnipapillata]
Length = 336
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +S+GS++ D +L+GG G ITE+ G GKTQLC Q+C++ Q+ G +Y
Sbjct: 97 IQISSGSKELDKLLQGGFETGSITEIFGEFRTGKTQLCHQLCVTCQLPVDCGGAEGKAMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
+ TE F R + E L + D + Y + L S + E + ++
Sbjct: 157 VDTEGTFRPERCLAVAERYGLNGQEVLDNVAYARAYNSDHQTQLLIHASAMMSEARYALL 216
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAMT 209
++DS ++R Y+ + R + L L+ + + V+ TNQV ++M
Sbjct: 217 IVDSATALYRTDYSGRGELSARQMHLARFLRTLLRLADEFGVAVVITNQVVAQVDGASMF 276
Query: 210 HSDKNIPALG 219
+D P G
Sbjct: 277 QTDPKKPIGG 286
>gi|430812161|emb|CCJ30383.1| unnamed protein product [Pneumocystis jirovecii]
Length = 347
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 106 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 165
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + + L + D + Y D + L Q+ E++ +
Sbjct: 166 IDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYN-ADHQLQLLGQAANMMAESRFSL 224
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R +A + R + L L+ ++ I V+ TNQV +
Sbjct: 225 LIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVA 277
>gi|548664|sp|P36601.1|RAD51_SCHPO RecName: Full=DNA repair protein rhp51; AltName: Full=RAD51 homolog
gi|297522|emb|CAA80399.1| Rec A-like Protein [Schizosaccharomyces pombe]
gi|395378|emb|CAA80879.1| Rad51-like protein [Schizosaccharomyces pombe]
Length = 365
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L+GG+ G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 122 ITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 181
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y L+ + + E++ ++
Sbjct: 182 IDTEGTFRPVRLLAVADRYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFSLL 241
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L L+ + I V+ TNQV +
Sbjct: 242 VVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVA 293
>gi|115394440|gb|ABI97152.1| Rad51 [Pneumocystis murina]
gi|115394442|gb|ABI97153.1| Rad51 [Pneumocystis murina]
Length = 343
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + + L + D + Y D + L Q+ E++ +
Sbjct: 162 IDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYN-ADHQLQLLGQAANMMAESRFSL 220
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R +A + R + L L+ ++ I V+ TNQV +
Sbjct: 221 LIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVA 273
>gi|294655372|ref|XP_457511.2| DEHA2B13024p [Debaryomyces hansenii CBS767]
gi|199429908|emb|CAG85517.2| DEHA2B13024p [Debaryomyces hansenii CBS767]
Length = 569
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 67/135 (49%), Gaps = 16/135 (11%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQ-VSQPHKG-VLYICTE 100
+ TG E D L GGI G ITE+ GASGCGK+QL LQ+C+ Q V P +YI TE
Sbjct: 97 IPTGLEALDRQLNGGIPLGEITEIFGASGCGKSQLLLQLCIYTQLVGDPENNQCIYISTE 156
Query: 101 SVFPTARLAQLCE-LSPLAKPKCS-DKIFITHCYE--------FIDLKRTLESQSGFIEN 150
S T RL + + + + K S D I +C + F L L + G
Sbjct: 157 SPLETRRLHDMIDHYNAKSDKKVSMDNISCIYCQDIENQDHTLFTQLPVKLSQEKG---- 212
Query: 151 KVGMIVIDSIAGIFR 165
KV I+IDSI+ R
Sbjct: 213 KVRAIIIDSISHHLR 227
>gi|295669710|ref|XP_002795403.1| DNA repair protein RAD51 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285337|gb|EEH40903.1| DNA repair protein RAD51 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 348
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G L+
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLF 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + LA + D I Y + L S + E + ++
Sbjct: 161 IDTEGTFRPTRLLSVAQRYGLAGEEVLDNIAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + L L+ + I V+ TNQV SA
Sbjct: 221 IVDSATALYRTDFSGRGELSNRQIHLAKFMRALRRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|194474078|ref|NP_001124039.1| meiotic recombination protein DMC1/LIM15 homolog [Rattus
norvegicus]
gi|149065923|gb|EDM15796.1| rCG59573, isoform CRA_b [Rattus norvegicus]
Length = 340
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 11 GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAG 61
G E +V K+K+ K AFQ + ++V ++TGS++FD +L GGI +
Sbjct: 64 GLSEAKVEKIKEAANKLIEPGFLTAFQYSEK----RKMVFHITTGSQEFDKLLGGGIESM 119
Query: 62 GITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPL 117
ITE G GKTQL +C++ Q+ + + G +++I TE+ F RL + + +
Sbjct: 120 AITEAFGEFRTGKTQLSHTLCVTAQLPGADGYSGGKIIFIDTENTFRPDRLRDIADRFNV 179
Query: 118 AKPKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA- 169
D + Y E +D + ++G + ++++DSI +FR ++
Sbjct: 180 DHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIVDSIMALFRVDFSG 235
Query: 170 EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ +R + + L ++S ++ + V TNQ+T+
Sbjct: 236 RGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>gi|448082658|ref|XP_004195184.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
gi|359376606|emb|CCE87188.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
Length = 322
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS + D +L GGI + +TE+ G CGKTQLC +C++ Q+ + G V YI
Sbjct: 85 ISTGSNQLDDVLGGGIMSMSLTEVFGEFRCGKTQLCHTLCVTAQLPRSMGGAEGKVAYID 144
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGMIV 156
TE F R+ + E + C + I + + L Q G + +++
Sbjct: 145 TEGTFRPDRIRAIAERFEVDPDACLENISYARALNS-EHQTELSEQLGVQLADGSYRLLI 203
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DSI +FR Y+ + R + L L+ + + V TNQV S
Sbjct: 204 VDSIMALFRVDYSGRGELNDRQQKLNQHLSALIRLAEDYNVAVFLTNQVQS 254
>gi|340343952|ref|ZP_08667084.1| RecA/RadA recombinase-like protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519093|gb|EGP92816.1| RecA/RadA recombinase-like protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 218
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++STG +K D L GGI G IT++ G SG GKTQL Q+C++ + VLY T
Sbjct: 1 MISTGLQKLDDFLSGGIPKGAITDIYGGSGTGKTQLLFQICIN--AIKNGGNVLYQDTTG 58
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
F R+ ++ + L +KI ++ + +++E + + +IVID+I
Sbjct: 59 SFRPERILEIQKQQNLTF-DILEKITVSRITNTSEQLKSIEVMN---NSNFSLIVIDNIT 114
Query: 162 GIFRNTYAEDKYVQRAHDMRDLAHYLHELS---IKHRIVVICTNQV 204
+F Y +D + + + Y+H LS I +I V+ TN +
Sbjct: 115 DLFSYEYPKDDAIFEKNSI--FFKYIHNLSLVAINKKIPVVITNMI 158
>gi|325186625|emb|CCA21173.1| DNA repair protein XRCC3 putative [Albugo laibachii Nc14]
Length = 262
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 28/207 (13%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++ TGS D +L GG G + E+ G + GKTQLCLQ+ L + + + Y+ TE
Sbjct: 14 ILPTGSPNIDRLLHGGFRQGLLHEICGEASSGKTQLCLQLLLQMCLED--EAACYVSTEG 71
Query: 102 VFPTARLAQLCELS------PLAKPKCS-------------DKIFITHCYEFIDLKRTLE 142
+ RL +L + L K + D+IFI H YE +L L+
Sbjct: 72 IGSIKRLHELAGIYADRHAFALKKRRRGFTGDTQSGSKFFLDRIFIEHIYEIDELIGLLQ 131
Query: 143 SQ--SGFIENKVGMIVIDSIAGIFR--NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
S+ S + +V ++VIDSIA +FR +T + +RA M +A+ + L ++ +V
Sbjct: 132 SRLPSLLTQKQVTLVVIDSIAALFRPESTKSIQDVSERARLMFQIANSIKILCGRYNVVF 191
Query: 199 ICTNQVTSAM---THSDKNIPALGLTY 222
I TNQV+S + ++ PALGL++
Sbjct: 192 IVTNQVSSIFEPNSRENRFKPALGLSW 218
>gi|198451235|ref|XP_001358289.2| GA15983 [Drosophila pseudoobscura pseudoobscura]
gi|198131396|gb|EAL27427.2| GA15983 [Drosophila pseudoobscura pseudoobscura]
Length = 254
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 19/196 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TG + D L GGI ITEL G SG GKT++CLQ+CL++Q+ + G+ L+I
Sbjct: 30 IATGHKSLDRHLGGGISLRQITELVGNSGTGKTKMCLQLCLNVQIPKTAGGLEGAALFID 89
Query: 99 TESVFPTARLAQLC-ELSPLAKPKCSD--------KIFITHCYEFIDLKRT-LESQSGFI 148
T F RL +L +L K + D + C + L T L S I
Sbjct: 90 TRQDFHPDRLQELARDLEKEYKQRAPDFQASKMLQNVHYVSCPNAVQLMATVLSSYRHLI 149
Query: 149 EN-KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-S 206
+ + +IVIDS+A R D QR + +L + +L +H + + TN +T
Sbjct: 150 AHPNIKVIVIDSLAFSLRML---DDGAQRFELLLELVESMRQLLREHEVAWVVTNVLTHR 206
Query: 207 AMTHSDKNIPALGLTY 222
+ +PALG Y
Sbjct: 207 CIGDQFHVVPALGEMY 222
>gi|90112019|gb|AAI14234.1| DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous
recombination (yeast) [Danio rerio]
Length = 342
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNP-IDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K FQ I ++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQP--HKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + G V++I TE+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGEFGYTGGKVIFIDTENTFRPERLKDIADRFNVDHEA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|395377|emb|CAA80878.1| RecA-like protein [Schizosaccharomyces pombe]
Length = 358
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L+GG+ G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 115 ITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 174
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y L+ + + E++ ++
Sbjct: 175 IDTEGTFRPVRLLAVADRYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFSLL 234
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L L+ + I V+ TNQV +
Sbjct: 235 VVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVA 286
>gi|145239409|ref|XP_001392351.1| DNA repair protein rhp51 [Aspergillus niger CBS 513.88]
gi|134076861|emb|CAK48229.1| unnamed protein product [Aspergillus niger]
Length = 347
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 100 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 160 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 219
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 220 VVDSATSLYRTDFNGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 279
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 280 MFNPDPKKPIGG 291
>gi|357122842|ref|XP_003563123.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Brachypodium
distachyon]
Length = 262
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+ TG E D +L GG+ G +TE++G S GKTQ+CL + V+ H G VLY+ T +
Sbjct: 32 LPTGLEGIDMLLGGGLRKGHLTEITGQSSSGKTQVCLYS--ASHVAARHMGVVLYLDTSN 89
Query: 102 VFPTARLAQLCELSPLA---KPK------------CSDKIFITHCYEFID-LKRTLESQS 145
F +R+A + + P++ +PK C + +E +D L+ ++ +
Sbjct: 90 SFSPSRIAHIVDELPISLIKEPKDMRLKRVMSSIVCESVFDVFALFEVLDQLEASMNDKV 149
Query: 146 GFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
NK+ +++IDS++ + K Q M +A L +L+ KH + V+ TN
Sbjct: 150 NSGGNKICLLIIDSVSSLLAPIIG-GKNSQGRSMMISVAMILKKLADKHNLSVLVTNHTV 208
Query: 206 S-------AMTHSDKNIPALGLTYERAH 226
A+ S K +P + L R H
Sbjct: 209 GGNGAPKPALGESWKAVPHVRLMISRDH 236
>gi|443921989|gb|ELU41506.1| Rah1 [Rhizoctonia solani AG-1 IA]
Length = 363
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS + D++L GGI G ITEL G GK+QLC + ++ Q+ G +Y
Sbjct: 124 VCITTGSTQLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQLPSNMGGGEGKCMY 183
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIV 156
I TE F RL Q+ E L + + Y L S F + +++
Sbjct: 184 IDTEGGFRPVRLLQVAERLGLDGEEVLQNVAYARAYNADHQNALLVQASAFGACRFALLI 243
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
+DS ++R ++ + R + L L+ + I V+ TNQV S+
Sbjct: 244 VDSCTNLYRTDFSGRGELSARQAHLGKFLRVLQRLADEFGIAVVITNQVMSS 295
>gi|320593570|gb|EFX05979.1| DNA repair protein [Grosmannia clavigera kw1407]
Length = 498
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 35/225 (15%)
Query: 28 AFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV 87
A + G+ P+ + +ST + D+ L GG G + E+ G SG GKTQL L + L++Q+
Sbjct: 76 AGEAGRLPL----LRISTLDDGLDAALGGGFVPGQLAEIVGESGAGKTQLLLALLLAVQL 131
Query: 88 SQPH---KGVLYICTESVFPTARLAQLCELSPL-------AKPKCSDKIFITH------- 130
P + LYI TE+ PT RLAQ+ + + A K S F+ +
Sbjct: 132 PPPRGLGRKALYIATEAPLPTGRLAQMVRTNRVLAGTVTDADTKPSPAAFLANIATINTP 191
Query: 131 ---CYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY--------AEDKYVQRAHD 179
E I L L Q G++V+DS+A FR + + R+ +
Sbjct: 192 DLEAQEHI-LTHQLPVQLDKAAGAFGLVVMDSVAANFRPFFGGSSSTGSTGESLAARSLE 250
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYER 224
+ L L L+ KH + V+ NQV +D+ P+L R
Sbjct: 251 LARLGMLLRSLAQKHNLAVVVANQVADRFDRADR--PSLSAKRPR 293
>gi|221128161|ref|XP_002162925.1| PREDICTED: DNA repair protein XRCC3-like, partial [Hydra
magnipapillata]
Length = 202
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 37/161 (22%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+STG E D L GGI G+TE+ G S GKTQLCLQ+CL+ +S + +L
Sbjct: 79 LSTGCELVDQCLHGGIIFPGVTEICGESASGKTQLCLQICLNALISDSYSSILD------ 132
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
+L L K +DL L +Q K+ +IV+DS+A
Sbjct: 133 ----------DLWTLLNIK-------------VDL--LLSNQ------KIKLIVLDSVAA 161
Query: 163 IFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+FR Y + R+ + LH +S K++I + NQ
Sbjct: 162 LFRAEYDASNMINRSQMLAKFGLKLHHISQKYKICFVVVNQ 202
>gi|115394436|gb|ABI97150.1| Rad51 [Pneumocystis carinii]
gi|115394438|gb|ABI97151.1| Rad51 [Pneumocystis carinii]
Length = 343
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + + L + D + Y D + L Q+ E++ +
Sbjct: 162 IDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYN-ADHQLQLLGQAANMMAESRFSL 220
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R +A + R + L L+ ++ I V+ TNQV +
Sbjct: 221 LIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVA 273
>gi|390594260|gb|EIN03673.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 534
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 47/261 (18%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL- 95
D ++T + D++L GGI G + ++SG S GKTQL LQ+ L++Q P G L
Sbjct: 76 DAVSGTITTADDALDALLGGGIQTGMMWDVSGESAAGKTQLALQLSLAVQFP-PEMGGLS 134
Query: 96 ----YICTESVFPTARLAQLCELSPLAKPK-----------CSDKIFITHCYEFIDLKR- 139
YI T S PT RL ++ + P P + H + + L R
Sbjct: 135 GSSCYITTRSRLPTTRLLEIAQNHPRLDPNICGLADIHTLHTPTPPMLQHVLDVV-LPRF 193
Query: 140 --TLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKY--VQRAHDMRDLAHYLHELSIKHR 195
+ +SG V ++VID++ +F + + +R+ + L+ LH L+ +
Sbjct: 194 VNQISDRSG--ARPVRLVVIDTLTELFHSETRTTSHWLFERSKIISALSASLHALASQRG 251
Query: 196 IVVICTNQVTSAMTHSDKNIPALGLTYERAHDM--RDLAHYLHEISIKHWIVVICTNQVT 253
+ ++ N+VT D L + E D+ R+ + +
Sbjct: 252 LAIVVLNEVTDVFDRDD-----LPPSREAGADVLYREQSRWFGR---------------A 291
Query: 254 SAMTHSDKNIPALGLSWSNLI 274
++M D+ LGL W+N +
Sbjct: 292 NSMPGEDRKQADLGLVWTNQV 312
>gi|303318132|ref|XP_003069067.1| DNA repair protein rhp51, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108750|gb|EER26922.1| DNA repair protein rhp51, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320037268|gb|EFW19206.1| DNA repair protein RAD51 [Coccidioides posadasii str. Silveira]
gi|392869512|gb|EAS28023.2| DNA repair protein rhp51 [Coccidioides immitis RS]
Length = 348
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D++L GG+ G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 100 ICITTGSRQLDTLLAGGVETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + LA + D + Y + L S + E + ++
Sbjct: 160 IDTEGTFRPVRLLAVAQRYGLAGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R ++ + R + L L+ + + V+ TNQV SA
Sbjct: 220 VVDSATSLYRTDFSGRGELSSRQTHLARFMRTLQRLADEFGVAVVITNQVVAQVEGGPSA 279
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 280 MFNPDPKKPIGG 291
>gi|169596921|ref|XP_001791884.1| hypothetical protein SNOG_01234 [Phaeosphaeria nodorum SN15]
gi|160707401|gb|EAT90883.2| hypothetical protein SNOG_01234 [Phaeosphaeria nodorum SN15]
Length = 437
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST E+ D+ L GGI G + E++G SG GKTQL L + L++Q+ P+ K +Y+ T
Sbjct: 97 ISTLDEELDAALGGGIPPGYLVEVTGESGAGKTQLLLTLLLAVQLPPPYGLAKSAVYVST 156
Query: 100 ESVFPTARLAQLCELSPL-------AKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK- 151
E+V T RLAQL P KP S KI + + L Q K
Sbjct: 157 EAVLSTKRLAQLLSSHPALASVSTDEKPSLS-KILSIQTPDLESQEHILRYQLPVAIKKH 215
Query: 152 -VGMIVIDSIAGIFRNTYAED-------KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ 203
+G+++IDS+A +R + + +R + L L EL+ I V+ NQ
Sbjct: 216 GIGLVIIDSVAANYRAEFEKKGANNGAASMAKRGTQLVQLGALLRELARTEGIAVVVANQ 275
Query: 204 VTSAMTHS 211
V T +
Sbjct: 276 VADRFTRA 283
>gi|303279168|ref|XP_003058877.1| Rad51 DNA recombinase 1 [Micromonas pusilla CCMP1545]
gi|226460037|gb|EEH57332.1| Rad51 DNA recombinase 1 [Micromonas pusilla CCMP1545]
Length = 411
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE------IVVSTGSEKFDSILKGGIHAGGIT 64
G E +V K+K K +G M + I++STGS K D +L GG +G +T
Sbjct: 73 GLSEMKVEKLK-AAAMKVVPLGFTTASMVQAVRESTIMISTGSSKLDELLGGGFESGSLT 131
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G GKTQLC + ++ Q+ G +YI TE F RL + E +
Sbjct: 132 EIYGEFRTGKTQLCHTLAVTCQLPLAQGGAEGKAMYIDTEGTFRPQRLIAIAERFGMDSA 191
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHD 179
D + + L + +G + E + G+I++DS+ ++R Y E + A
Sbjct: 192 AVLDNVAYAKAHNCEHQSELLVAAAGMMAEARFGVIIVDSVTNLYRTEY-EGRGELSARQ 250
Query: 180 MRDLAHYLHELS 191
M L +L +L+
Sbjct: 251 MH-LGKFLRQLA 261
>gi|119173930|ref|XP_001239326.1| hypothetical protein CIMG_08947 [Coccidioides immitis RS]
Length = 366
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D++L GG+ G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 118 ICITTGSRQLDTLLAGGVETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 177
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + LA + D + Y + L S + E + ++
Sbjct: 178 IDTEGTFRPVRLLAVAQRYGLAGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 237
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R ++ + R + L L+ + + V+ TNQV SA
Sbjct: 238 VVDSATSLYRTDFSGRGELSSRQTHLARFMRTLQRLADEFGVAVVITNQVVAQVEGGPSA 297
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 298 MFNPDPKKPIGG 309
>gi|403224170|dbj|BAM42300.1| DNA repair protein Rad51 [Theileria orientalis strain Shintoku]
Length = 343
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS +FD++L+GGI G ITE+ G GK+QLC + ++ Q+ G L+
Sbjct: 103 IKFTTGSVQFDTLLQGGIETGSITEVIGEFKTGKSQLCHTLAVTCQLPVEQSGGEGKCLW 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I +E F R+ + + L+ C D + Y L+ +E+ + + + ++
Sbjct: 163 IDSEGTFRPERIVSIAKRFGLSPSDCLDNVAYARAYNTDHQLELLVEATAMMSQTRFALL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
++DS ++R+ Y+ + R + L ++ + V+ TNQV
Sbjct: 223 IVDSATALYRSDYSGRGELASRQMHLCKFLRALQRIADTFGVAVVITNQV 272
>gi|169781702|ref|XP_001825314.1| DNA repair protein rhp51 [Aspergillus oryzae RIB40]
gi|238498508|ref|XP_002380489.1| DNA repair protein RAD51, putative [Aspergillus flavus NRRL3357]
gi|83774056|dbj|BAE64181.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693763|gb|EED50108.1| DNA repair protein RAD51, putative [Aspergillus flavus NRRL3357]
gi|391865352|gb|EIT74636.1| DNA repair protein RAD51/RHP55 [Aspergillus oryzae 3.042]
Length = 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 221 VVDSATALYRTDFNGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|358372925|dbj|GAA89526.1| DNA repair protein RAD51 [Aspergillus kawachii IFO 4308]
Length = 347
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 100 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 160 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 219
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 220 VVDSATSLYRTDFNGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 279
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 280 MFNPDPKKPIGG 291
>gi|308159744|gb|EFO62265.1| DNA repair protein RAD51 [Giardia lamblia P15]
Length = 389
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 18/223 (8%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+ D +K F G ++ + + +STG D++L GGI + ITE
Sbjct: 121 GLSEAKVDKILDAARKHSQPGFMSGVAALERRQRIRRISTGCSDLDALLGGGIESMAITE 180
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDK 125
+ G GKTQLC + ++ Q+ V Y+ TE F ++ + E L K
Sbjct: 181 VFGEFRSGKTQLCHTIAVTAQLDGSR--VAYLDTEGTFRPEKIGPIAERYKLDPTTALSK 238
Query: 126 IFITHCY---EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMR 181
I Y + I+L Q E K ++++DS+ +FR + + R +
Sbjct: 239 IAYARAYTHEQQIELLAAAAEQ--MSEKKFALLIVDSLTALFRVDFTGRGELADRQQKLG 296
Query: 182 DLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
L +L+ + I + TNQV +AM +D P G
Sbjct: 297 QHLASLAKLADEFNIAIFVTNQVMAQVDGAAMFTADPKKPIGG 339
>gi|37931470|gb|AAP13463.1| Rad51p [Kluyveromyces lactis]
Length = 369
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 127 ICLTTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDMGGGEGKCLY 186
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + + Y + L++ + + E++ +I
Sbjct: 187 IDTEGTFRPIRLVSIAQRFGLDPDDALNNVAYARAYNADHQLKLLDAAAQMMSESRFSLI 246
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R ++ + R + L L+ + + + TNQV +
Sbjct: 247 IVDSIMALYRTDFSGRGELSARQMHLAKFMRSLQRLADQFGVAAVVTNQVVA 298
>gi|429965461|gb|ELA47458.1| DNA repair protein RAD51 [Vavraia culicis 'floridensis']
Length = 343
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS++ D +LKGGI G ITE+ G GKTQLC + ++ Q+ + G LY
Sbjct: 103 VFITTGSQELDKLLKGGIETGSITEIFGEFRTGKTQLCHTLAVTCQLDRESGGGSGKALY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R + + L + + I Y + L + + E+ +I
Sbjct: 163 IDTEGTFRPERCIAVAQRFGLDPDQVLENISYARAYNSDHQSQLLVQAAAMLSESNYSLI 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV------TSAM 208
++DS ++R ++ + R + L L+ + + V+ TNQV +AM
Sbjct: 223 IVDSAMALYRTDFSGRGELGARQIHLARFLRMLLRLADEFSVAVVITNQVVASVDGAAAM 282
Query: 209 THSDKNIPALG 219
++D P G
Sbjct: 283 FNADPKKPVGG 293
>gi|45190614|ref|NP_984868.1| AER008Wp [Ashbya gossypii ATCC 10895]
gi|44983593|gb|AAS52692.1| AER008Wp [Ashbya gossypii ATCC 10895]
gi|374108090|gb|AEY96997.1| FAER008Wp [Ashbya gossypii FDAG1]
Length = 510
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 20/190 (10%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+TG D++L GGI+ GITE+ G S GK+Q +Q+ L++Q+ G ++I T
Sbjct: 88 TTGDVGIDALLNGGIYTHGITEVFGESSSGKSQFLMQLSLAVQLPLELDGSAGQCVFITT 147
Query: 100 ESVFPTARLAQLCELSPL--AKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK---VGM 154
ES PT R+ + + + A IF C ++ L Q + + + +
Sbjct: 148 ESDLPTKRIESMIKSREIFSAGRVSQSNIFTATCNDWTSQNHILSVQLPILLERNPNIRL 207
Query: 155 IVIDSIAGIFRNTYAEDKYVQRAHDMRDL----AHYLHELSIKHRIVVICTNQVTSAMTH 210
++IDSI+ R A K Q++ D R L A L LS KH + V+ NQV
Sbjct: 208 VIIDSISHHLRVELAA-KTFQQSLDNRSLIDQMAQNLLHLSQKHAVAVVVANQV------ 260
Query: 211 SDKNIPALGL 220
DK IP L L
Sbjct: 261 GDKPIPDLPL 270
>gi|257051990|ref|YP_003129823.1| DNA repair and recombination protein RadB [Halorhabdus utahensis
DSM 12940]
gi|256690753|gb|ACV11090.1| DNA repair and recombination protein RadB [Halorhabdus utahensis
DSM 12940]
Length = 227
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+STG + D +L GG+ G +T++ G GKT L L +++ + + LY+ TE V
Sbjct: 5 ISTGCDAVDDLLGGGLERGAVTQIYGQPAAGKTNLAL--GAAVETAAAGESALYLDTEGV 62
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAG 162
RL QL + S +I +T + F + + + F ++V +IV+DS G
Sbjct: 63 -SIDRLEQLADARGDVSELAS-RIILTEAHTFEEQQEAVRDAEEFA-SQVDLIVLDSATG 119
Query: 163 IFR--NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R T ED RA R + H L L+ KH + V TNQV S
Sbjct: 120 FYRLERTEQEDGEALRAV-ARQITHLL-ALARKHDLAVAFTNQVFS 163
>gi|237833229|ref|XP_002365912.1| DNA repair protein, putative [Toxoplasma gondii ME49]
gi|211963576|gb|EEA98771.1| DNA repair protein, putative [Toxoplasma gondii ME49]
gi|221488373|gb|EEE26587.1| DNA repair protein, putative [Toxoplasma gondii GT1]
gi|221508875|gb|EEE34444.1| DNA repair protein, putative [Toxoplasma gondii VEG]
Length = 354
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K K+ F + ++ E I +TGS + DS+LKGGI G +TE
Sbjct: 78 GLSEQKVEKLKKASKELCNLGFCSAQEYLEARENLIRFTTGSVQLDSLLKGGIETGNLTE 137
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GKTQLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 138 LFGEFRTGKTQLCHTLAVTCQLPIEQAGGEGKCLWIDTEGTFRPERIVSIAKRFGLNAND 197
Query: 122 CSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
C D + Y ++ +E+ + E++ ++++DS ++R+ Y
Sbjct: 198 CLDNVAYARAYNCDHQMELLMEASAMMAESRFALLIVDSATALYRSEY 245
>gi|50309711|ref|XP_454867.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644002|emb|CAG99954.1| KLLA0E20241p [Kluyveromyces lactis]
Length = 369
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 127 ICLTTGSKNLDTLLGGGIETGSITELFGEFRTGKSQLCHTLAVTCQIPLDMGGGEGKCLY 186
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + + Y + L++ + + E++ +I
Sbjct: 187 IDTEGTFRPIRLVSIAQRFGLDPDDALNNVAYARAYNADHQLKLLDAAAQMMSESRFSLI 246
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R ++ + R + L L+ + + + TNQV +
Sbjct: 247 IVDSIMALYRTDFSGRGELSARQMHLAKFMRSLQRLADQFGVAAVVTNQVVA 298
>gi|344238785|gb|EGV94888.1| DNA repair protein XRCC3 [Cricetulus griseus]
Length = 215
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D L GG+ GIT+L+G S GKTQL LQ+CL++Q + + G+ +YIC
Sbjct: 82 LSLGCPVLDQFLGGGLPLEGITDLAGRSSAGKTQLGLQLCLTVQFPRQYGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDL 137
TE FP+ RL QL E + K + S+ IFI H + + +
Sbjct: 142 TEDAFPSKRLWQLIEQQQQLRTDVPGEVIQKIRFSNHIFIEHAADVVSV 190
>gi|121701915|ref|XP_001269222.1| DNA repair protein RAD51, putative [Aspergillus clavatus NRRL 1]
gi|119397365|gb|EAW07796.1| DNA repair protein RAD51, putative [Aspergillus clavatus NRRL 1]
Length = 347
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 100 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 159
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 160 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 219
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 220 VVDSATSLYRTDFNGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 279
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 280 MFNPDPKKPIGG 291
>gi|296422275|ref|XP_002840687.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636908|emb|CAZ84878.1| unnamed protein product [Tuber melanosporum]
Length = 408
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 48/215 (22%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
++T S D +L I ITE +G SG GKTQ+ L + L++Q+S P +G L YI
Sbjct: 84 ITTHSPTLDRLLNK-IPTQAITEFAGESGSGKTQILLLLTLTVQLS-PSRGGLGRPAVYI 141
Query: 98 CTESVFPTARLAQL----CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK-- 151
TE+ T RL Q+ P+ + +DK+F C + + + Q + K
Sbjct: 142 STEAPLSTLRLIQMKNYISRDLPVGEQPTTDKVFSIVCSDLETQEHIIRYQLPVLVQKFN 201
Query: 152 VGMIVIDSIAGIFRNTYAE-----------------------------------DKYVQR 176
VG++VIDSIA FR + + QR
Sbjct: 202 VGLVVIDSIAANFRAEFERPMNRNKKLRSSNTSTPSSSPSSSSTGAPSAGARHGSQMAQR 261
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+M LA L L+I H + V+ +NQV+ T S
Sbjct: 262 GKEMVRLAATLRHLAINHNLAVVVSNQVSDKFTPS 296
>gi|378729398|gb|EHY55857.1| DNA repair protein rhp51 [Exophiala dermatitidis NIH/UT8656]
Length = 349
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D +L GG+ G ITE+ G GK+Q+C M ++ Q+ G LY
Sbjct: 103 ISITTGSKNLDRLLGGGVETGSITEIFGEFRTGKSQICHTMAVTCQLPFDMGGGEGKCLY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCY--EFIDLKRTLESQSGFIENKVGM 154
I TE F RL + L + D + Y E SQ E + +
Sbjct: 163 IDTEGTFRPVRLLSVANRYGLEGEEVLDNVAYARAYNSEHQLQLLQQASQM-MCETRFSL 221
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R Y + R M L L+ + I V+ TNQV S
Sbjct: 222 LIVDSATSLYRTDYNGRGELSSRQSHMAKFLRTLQRLADEFGIAVVITNQVVAQVDGGPS 281
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 282 AMFNPDPKKPIGG 294
>gi|395394859|gb|AFN55127.1| Rad51 [Toxoplasma gondii]
Length = 354
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K K+ F + ++ E I +TGS + DS+LKGGI G +TE
Sbjct: 78 GLSEQKVEKLKKASKELCNLGFCSAQEYLEARENLIRFTTGSVQLDSLLKGGIETGNLTE 137
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GKTQLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 138 LFGEFRTGKTQLCHTLAVTCQLPIEQAGGEGKCLWIDTEGTFRPERIVSIAKRFGLNAND 197
Query: 122 CSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
C D + Y ++ +E+ + E++ ++++DS ++R+ Y
Sbjct: 198 CLDNVAYARAYNCDHQMELLMEASAMMAESRFALLIVDSATALYRSEY 245
>gi|70995295|ref|XP_752407.1| DNA repair protein RAD51 [Aspergillus fumigatus Af293]
gi|66850042|gb|EAL90369.1| DNA repair protein RAD51, putative [Aspergillus fumigatus Af293]
gi|159131162|gb|EDP56275.1| DNA repair protein RAD51, putative [Aspergillus fumigatus A1163]
Length = 348
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 221 VVDSATSLYRTDFNGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|322698012|gb|EFY89786.1| DNA repair protein RAD51 [Metarhizium acridum CQMa 102]
Length = 348
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 161 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYN-SDHQLQLLNQAAAMMCETRFSL 219
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+V+DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 220 LVVDSATSLYRTDFCGRGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 279
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 280 AMFNPDPKKPIGG 292
>gi|119495909|ref|XP_001264730.1| DNA repair protein RAD51, putative [Neosartorya fischeri NRRL 181]
gi|119412892|gb|EAW22833.1| DNA repair protein RAD51, putative [Neosartorya fischeri NRRL 181]
Length = 348
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 221 VVDSATSLYRTDFNGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|198420224|ref|XP_002126934.1| PREDICTED: similar to RAD51 homolog isoform 1 [Ciona intestinalis]
Length = 338
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQ+C + + Q+ G LY
Sbjct: 99 IQITTGSKELDKLLQGGIETGSITEIFGEFRTGKTQICHTIAATCQLPIEQGGGEGKCLY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + E L D + Y D + L Q+ + E + +
Sbjct: 159 IDTEGTFRPERLLAVAERYGLNGADVLDNVAYARAYN-TDHQSQLLIQAAAMMSETRYAV 217
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS-----AM 208
IV+DS ++R Y+ + R + L L+ + + VI TNQV + AM
Sbjct: 218 IVVDSATALYRTDYSGRGELSARQMHLGRFLRTLLRLADEFGVAVIITNQVVAQVDGGAM 277
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 278 FCADPKKPIGG 288
>gi|164428179|ref|XP_957194.2| hypothetical protein NCU01771 [Neurospora crassa OR74A]
gi|16416086|emb|CAB91223.2| related to RAD57 protein [Neurospora crassa]
gi|157072044|gb|EAA27958.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 510
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 41/204 (20%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYIC 98
+ST D L GGI AG +TE++G SG GKTQ L + LS+Q+ PH + LYI
Sbjct: 106 TISTLDPDIDRALGGGIPAGYVTEITGESGAGKTQFLLTLLLSVQLPPPHGLGRPALYIS 165
Query: 99 TESVFPTARLAQLCELSPL---------------------AKPKCSDKI-FITHCYEFID 136
TE+ T RLAQ+ +P +P + I +T E D
Sbjct: 166 TEAPLSTRRLAQMLTTNPFYADLDSESGRGGEGGGGGGGGKRPSLDNIISTVTPDLESQD 225
Query: 137 LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY----------------AEDKYVQRAHDM 180
T + +G++V+DS+A +R + R ++
Sbjct: 226 HILTYQVPVEIERRNIGLLVLDSVAANYRAEFDRSSKEAATSSSTPGARSSNMGARTAEL 285
Query: 181 RDLAHYLHELSIKHRIVVICTNQV 204
L L +L+ K+ + V+ +NQV
Sbjct: 286 VRLGMQLRDLAQKYNLAVVVSNQV 309
>gi|389847826|ref|YP_006350065.1| DNA repair and recombination protein RadB [Haloferax mediterranei
ATCC 33500]
gi|448617807|ref|ZP_21666267.1| DNA repair and recombination protein RadB [Haloferax mediterranei
ATCC 33500]
gi|388245132|gb|AFK20078.1| DNA repair and recombination protein RadB [Haloferax mediterranei
ATCC 33500]
gi|445748175|gb|ELZ99625.1| DNA repair and recombination protein RadB [Haloferax mediterranei
ATCC 33500]
Length = 252
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 35 PIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV 94
P D+TE VSTG D +L GG G +T++ G S GKT + L + + + V
Sbjct: 21 PTDVTE-SVSTGCSTLDDLLDGGFERGTVTQVYGPSAAGKTNVALSAAVRVAAAGGT--V 77
Query: 95 LYICTESVFPTARLAQLCE-LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG 153
+YI TE + R QL E ++P + ++ I+ Y+F D ++ + + F +
Sbjct: 78 VYIDTEGL-SVDRFQQLAESVAPEDVESVTSRLMISEAYDFEDQEQAVRDAAEFADG-AD 135
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAH---YLHELSIKHRIVVICTNQVTS 206
+IV+DS G +R D A +R +A +L L+ KH + V+ TNQV S
Sbjct: 136 LIVLDSATGFYRLERTADGDGGEA--LRRVARQVTHLLSLARKHDLAVVLTNQVYS 189
>gi|254166621|ref|ZP_04873475.1| DNA repair and recombination protein RadB [Aciduliprofundum boonei
T469]
gi|254168908|ref|ZP_04875748.1| DNA repair and recombination protein RadB [Aciduliprofundum boonei
T469]
gi|197622172|gb|EDY34747.1| DNA repair and recombination protein RadB [Aciduliprofundum boonei
T469]
gi|197624231|gb|EDY36792.1| DNA repair and recombination protein RadB [Aciduliprofundum boonei
T469]
Length = 234
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+ +G E DS+L GG G ITEL G +G GKT +CL ++ V++ V+YI TE +
Sbjct: 11 IKSGCESIDSLLNGGFERGCITELYGEAGSGKTNICLSTAIN--VAKEGHYVIYIDTEGI 68
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSI 160
R +QL +AK +I Y+F +E +E N + ++++DS+
Sbjct: 69 -SMERFSQLGGNEDIAK-----RILFYKVYKFSQQAEIIERAINLVEKRNDIILLIVDSM 122
Query: 161 AGIFRNTYA--EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPAL 218
+R ED ++ + L+ ++ K I VI TNQV M + K + +
Sbjct: 123 TEFYRAERGVEEDLSAKKRSSLAWQLSILNSIARKKNIAVIITNQVY--MDTTTKELRPI 180
Query: 219 G 219
G
Sbjct: 181 G 181
>gi|1816461|emb|CAB02454.1| uvsC [Emericella nidulans]
gi|259488442|tpe|CBF87878.1| TPA: UvsC protein [Source:UniProtKB/TrEMBL;Acc:P78579] [Aspergillus
nidulans FGSC A4]
Length = 348
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 221 VVDSATSLYRTDFNGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|91080301|ref|XP_974146.1| PREDICTED: similar to RAD51 homolog protein [Tribolium castaneum]
gi|270006417|gb|EFA02865.1| spindle A-like protein [Tribolium castaneum]
Length = 338
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITE+ G GKTQ+C + ++ Q+S G LY
Sbjct: 99 IQLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQICHTLAVTCQLSVESGGGEGKCLY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL--ESQSGFIENKVGM 154
I TE F RL + E + + D + + D + L + + +E++ +
Sbjct: 159 IDTEGTFRPERLLPVAERYNMDGQQVLDNVVFARAFN-TDHQTELLVHAAAMMMESRYCL 217
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAM 208
+++DS ++R Y+ + R + + L L+ + + V+ TNQV +AM
Sbjct: 218 LIVDSATSLYRTDYSGRGELSARQNHLARFLRMLLRLADEFGVAVVLTNQVVAQVDGAAM 277
Query: 209 THSDKNIPALG 219
++D P G
Sbjct: 278 FNADPKKPIGG 288
>gi|449274710|gb|EMC83788.1| DNA repair protein RAD51 like protein 2, partial [Columba livia]
Length = 253
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 16 EVNKVKDLKKKKAFQVG-KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGK 74
+V++ K + A+++ K + + +ST D +L GG+ G +TE++ GCGK
Sbjct: 55 KVSRACAPKMQTAYEMKLKKSVSPSSAFLSTTLHSLDKVLHGGVPCGSLTEITSPPGCGK 114
Query: 75 TQLCLQM----CLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFI-- 128
TQ C+ M L L + + V+YI TES F RL ++ +K+F
Sbjct: 115 TQFCIMMSVLATLPLSMGGLNGAVIYIDTESAFSAERLIEIAGNRLPTYFDSDEKLFCMT 174
Query: 129 --THCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
H Y + LKR + + I KV +I+IDS+A + R +
Sbjct: 175 RSVHVYRDLTCGSVLKRIMSLEEEIISKKVKLIIIDSVASVVRKEF 220
>gi|401408511|ref|XP_003883704.1| putative DNA repair protein [Neospora caninum Liverpool]
gi|325118121|emb|CBZ53672.1| putative DNA repair protein [Neospora caninum Liverpool]
Length = 353
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K K+ F + ++ E I +TGS + DS+LKGGI G +TE
Sbjct: 76 GLSEQKVEKLKKASKELCNLGFCSAQEYLEARENLIRFTTGSVQLDSLLKGGIETGNLTE 135
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
L G GKTQLC + ++ Q+ G L+I TE F R+ + + L
Sbjct: 136 LFGEFRTGKTQLCHTLAVTCQLPIEQAGGEGKCLWIDTEGTFRPERIVSIAKRFGLNAND 195
Query: 122 CSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
C D + Y ++ +E+ + E++ ++++DS ++R+ Y
Sbjct: 196 CLDNVAYARAYNCDHQMELLMEASAMMAESRFALLIVDSATALYRSEY 243
>gi|312136410|ref|YP_004003747.1| DNA repair and recombination protein rada [Methanothermus fervidus
DSM 2088]
gi|311224129|gb|ADP76985.1| DNA repair and recombination protein RadA [Methanothermus fervidus
DSM 2088]
Length = 311
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS+ D ++ GGI ITE+ G G GK+QL ++ +++Q+ G+ ++I
Sbjct: 79 ITTGSKALDDLIGGGIETQSITEVFGEFGSGKSQLAHELAVTVQLPIEKGGLEAEAVFID 138
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN--KVGMIV 156
TE+ F R+ Q+ + L K I++ + E + I+ + +++
Sbjct: 139 TENTFRPERIEQIAKHFKLDTKKVLKNIYVARAFNSSHQILMAEKVNDLIQEGKNIRLVI 198
Query: 157 IDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DS+ FR Y + R + H L L+ + I V TNQV +
Sbjct: 199 VDSLTSHFRAEYVGREALATRQQKLNQHLHTLQNLATTYNIAVFVTNQVQA 249
>gi|242767957|ref|XP_002341472.1| DNA repair protein RAD51, putative [Talaromyces stipitatus ATCC
10500]
gi|218724668|gb|EED24085.1| DNA repair protein RAD51, putative [Talaromyces stipitatus ATCC
10500]
Length = 349
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 162 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 221
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 222 IVDSATALYRTDFNGRGELSNRQTHLAKFLRTLQRLADEFGIAVVITNQVVS 273
>gi|212542819|ref|XP_002151564.1| DNA repair protein RAD51, putative [Talaromyces marneffei ATCC
18224]
gi|111380646|gb|ABH09700.1| RAD51-like protein [Talaromyces marneffei]
gi|210066471|gb|EEA20564.1| DNA repair protein RAD51, putative [Talaromyces marneffei ATCC
18224]
Length = 349
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 162 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 221
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 222 IVDSATALYRTDFNGRGELSNRQTHLAKFLRTLQRLADEFGIAVVITNQVVS 273
>gi|288559373|ref|YP_003422859.1| DNA repair and recombination protein RadA [Methanobrevibacter
ruminantium M1]
gi|288542083|gb|ADC45967.1| DNA repair and recombination protein RadA [Methanobrevibacter
ruminantium M1]
Length = 311
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 9/196 (4%)
Query: 18 NKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQL 77
K + + + AF V + D+ I +TGS+ D ++ GGI ITE+ G G GK+Q+
Sbjct: 56 RKAEKIDFETAFDVMERRRDVGRI--TTGSKNVDELIGGGIETQSITEVFGEFGSGKSQI 113
Query: 78 CLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE 133
++ +++Q+ + G+ ++I TE+ F R+ Q+ + + + + +I I +
Sbjct: 114 SHELAVTVQLPKERGGLEGECVFIDTENTFRPERIEQIADACGIDREEALQRIHIARAFN 173
Query: 134 FIDLKRTLESQSGFIENKVG--MIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHEL 190
E + I++ V ++++DS+ FR Y + R + H L ++
Sbjct: 174 SSHQILMAEKINELIQSGVNVRLVIVDSLMAHFRAEYVGRESLATRQQKLNQHLHALQQI 233
Query: 191 SIKHRIVVICTNQVTS 206
+ + + V TNQV +
Sbjct: 234 ANTYNVAVFLTNQVQA 249
>gi|448087220|ref|XP_004196277.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
gi|359377699|emb|CCE86082.1| Piso0_005731 [Millerozyma farinosa CBS 7064]
Length = 294
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS + D +L GGI + +TE+ G CGKTQLC +C++ Q+ + G V YI
Sbjct: 57 ISTGSNQLDDVLGGGIMSMSLTEVFGEFRCGKTQLCHTLCVTAQLPRSMGGAEGKVAYID 116
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGMIV 156
TE F R+ + E + C + I + + L Q G + +++
Sbjct: 117 TEGTFRPDRIRAIAERFEVDPDACLENISYARALNS-EHQTELSEQLGVQLADGSYRLLI 175
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DSI +FR Y+ + R + L L+ + + V TNQV S
Sbjct: 176 VDSIMALFRVDYSGRGELNDRQQKLNQHLSALIRLAEDYNVAVFLTNQVQS 226
>gi|118382143|ref|XP_001024231.1| hypothetical protein TTHERM_00459230 [Tetrahymena thermophila]
gi|89305998|gb|EAS03986.1| hypothetical protein TTHERM_00459230 [Tetrahymena thermophila
SB210]
Length = 356
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 80/179 (44%), Gaps = 14/179 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
+STGS+ D IL GGI + ITE G GKTQ+ C+ Q SQ H VLYI
Sbjct: 111 ISTGSKALDDILNGGIESQSITEFYGEYRSGKTQIAHTACVLAQ-SQDHCQSPGKVLYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL---ESQSGFIENKVGMI 155
TE F R+ Q+ + I Y +D + TL +Q EN ++
Sbjct: 170 TEGTFRPERICQIASHYGMEGEYALSNIIYGRAYN-VDQQNTLLIKGAQLMVEENCFALL 228
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV----TSAMT 209
V+DSI FR ++ +R + L ++ + I VI TNQV + AMT
Sbjct: 229 VVDSIMANFRCDFSGRGDLSERQQALGKFMSRLQRMAAEFNIAVIITNQVMADPSGAMT 287
>gi|67521554|ref|XP_658841.1| hypothetical protein AN1237.2 [Aspergillus nidulans FGSC A4]
gi|9904315|gb|AAB39323.2| ARECA [Emericella nidulans]
gi|40746674|gb|EAA65830.1| hypothetical protein AN1237.2 [Aspergillus nidulans FGSC A4]
Length = 344
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 97 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 157 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 217 VVDSATSLYRTDFNGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 276
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 277 MFNPDPKKPIGG 288
>gi|353236565|emb|CCA68557.1| related to DMC1-Meiosis-specific protein [Piriformospora indica DSM
11827]
Length = 355
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 29/227 (12%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTE-----IVVSTGSEKFD 51
M Q+LK+ G E +V+K+K+ +K +F G ++++E +STGS+ D
Sbjct: 70 MTPKRQLLKIKGLSEAKVDKIKEAVQKILGSSFSTG---VEVSEKRKRVTSISTGSKAVD 126
Query: 52 SILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTAR 107
+IL GGI I+E+ G GKTQL M + Q+ G V YI TE F R
Sbjct: 127 AILGGGIQTQSISEVYGEFRTGKTQLAHTMSVLAQLPADMGGGGGKVAYIDTEGTFRPDR 186
Query: 108 LAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENK-VGMIVIDSI 160
+ + + + I + E I+ E+ + F E K ++++DSI
Sbjct: 187 IRAIADRFGVDGETALSNILYARAFNSEHQMELIN-----EATTRFAEEKDYKLMIVDSI 241
Query: 161 AGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+FR ++ + +R + + L +++ ++ + ++ TNQV S
Sbjct: 242 MALFRTDFSGRGELSERQQKLASMLSKLSKIAEEYNLAILLTNQVQS 288
>gi|115491377|ref|XP_001210316.1| DNA repair protein RAD51 [Aspergillus terreus NIH2624]
gi|114197176|gb|EAU38876.1| DNA repair protein RAD51 [Aspergillus terreus NIH2624]
Length = 348
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
V+DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 221 VVDSATSLYRTDFNGRGELSSRQTHLAKFLRTLQRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|116206996|ref|XP_001229307.1| hypothetical protein CHGG_02791 [Chaetomium globosum CBS 148.51]
gi|88183388|gb|EAQ90856.1| hypothetical protein CHGG_02791 [Chaetomium globosum CBS 148.51]
Length = 350
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 103 ISITTGSKQLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 163 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 221
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+V+DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 222 LVVDSATSLYRTDFLGRGELNSRQTHLAKFLRTLQRLADEFGIAVVITNQVVAQVDGGPS 281
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 282 AMFNPDPKKPIGG 294
>gi|189210816|ref|XP_001941739.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330918612|ref|XP_003298289.1| hypothetical protein PTT_08944 [Pyrenophora teres f. teres 0-1]
gi|187977832|gb|EDU44458.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311328605|gb|EFQ93618.1| hypothetical protein PTT_08944 [Pyrenophora teres f. teres 0-1]
Length = 348
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 98 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F R + L+ + D + Y D + L +Q+ E + +
Sbjct: 158 IDTEGTFRPVRCLAVANRYGLSGEEVLDNVAYARAYNS-DHQLELLNQAAQMMTETRFSL 216
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+V+DS ++R +A + R + L L+ + I VI TNQV S
Sbjct: 217 LVVDSATALYRTDFAGRGELSARQTHLAKFMRTLQRLADEFGIAVIITNQVVAQVDGGPS 276
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 277 AMFNPDPKKPIGG 289
>gi|156065967|ref|XP_001598905.1| hypothetical protein SS1G_00994 [Sclerotinia sclerotiorum 1980]
gi|154691853|gb|EDN91591.1| hypothetical protein SS1G_00994 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 325
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 11 GFQEWEVNKVKDLKKKKAF-QVGKNPIDMTE--------IVVSTGSEKFDSILKGGIHAG 61
GF + +V KVK+ KK A G + E I +STGS++ D+ L GG
Sbjct: 45 GFSDIKVEKVKEAAKKVAGPNTGGQFVTAAEHGHFRKKCIRISTGSKQLDACLNGGFQTM 104
Query: 62 GITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPL 117
I+E+ G CGKTQL M + Q+ + G V YI TE F R+A++ E +
Sbjct: 105 SISEVFGEFRCGKTQLAHTMAVIAQLPKNMGGAEGKVAYIDTEGTFRPERIAEIAERFGV 164
Query: 118 AKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN----KVGMIVIDSIAGIFRNTY-AEDK 172
+ + I + + LE G +N + +++IDSI ++R+ + +
Sbjct: 165 DPDQALENIVYARAQ---NTEMQLELLEGLAQNFATDEYRLLIIDSIMSLYRSDFIGRGE 221
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + +++ + +VV TNQV S
Sbjct: 222 LSERQSALNAFLRRATQMAEEFNLVVFMTNQVMS 255
>gi|253744423|gb|EET00637.1| DNA repair protein RAD51 [Giardia intestinalis ATCC 50581]
Length = 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 18/223 (8%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+ D +K F G ++ + + +STG D++L GGI + ITE
Sbjct: 102 GLSEAKVDKILDAARKHSQPGFMSGITALERRQRIRRISTGCSDLDTLLGGGIESMAITE 161
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDK 125
+ G GKTQLC + ++ Q+ V Y+ TE F ++ + E L K
Sbjct: 162 VFGEFRSGKTQLCHTIAVTAQLDGSR--VAYLDTEGTFRPEKIGPIAERYKLDPTVTLSK 219
Query: 126 IFITHCY---EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMR 181
I Y + I+L Q E K +++IDS+ +FR + + R +
Sbjct: 220 IAYARAYTHEQQIELLAAAAEQ--MSEKKFALLIIDSLTALFRVDFTGRGELADRQQKLG 277
Query: 182 DLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
L +L+ + I + TNQV +AM +D P G
Sbjct: 278 QHLASLAKLADEFNIAIFVTNQVMAQVDGAAMFTADPKKPIGG 320
>gi|390361377|ref|XP_003729914.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Strongylocentrotus purpuratus]
Length = 341
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYIC 98
++TGS + D +L GGI + ITE G GKTQL +C+ Q+ P V++I
Sbjct: 102 ITTGSTELDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVCTQLPGSNGYPGGKVIFID 161
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + L D + Y L+ +G + G ++
Sbjct: 162 TENTFRPDRLRDIADRFNLDHGAMLDNVLYARAYTSEHQFELLDYAAGKFHEEPGVFKLL 221
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR + + R + + L ++S ++ + V TNQ+TS
Sbjct: 222 IIDSIMALFRVDFTGRGELADRQQKLAQMLSKLQKISEEYNVAVFVTNQMTS 273
>gi|429329332|gb|AFZ81091.1| DNA repair protein rad51, putative [Babesia equi]
Length = 343
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTE-----IVVSTGSEKFDSILKGGIHAGGITE 65
GF E +V K+K K+ + D E I +TGS + D +LKGGI G ITE
Sbjct: 68 GFSEQKVCKIKAACKELCHLGFCSAHDYLEARGNLIKFTTGSVQLDVLLKGGIETGSITE 127
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPK 121
+ G GK+QLC + ++ Q+ G L+I TE F R+ + + L+
Sbjct: 128 IIGEFKTGKSQLCHTLSVTCQLPVEQSGGEGKCLWIDTEGTFRPERVVSIAKRFGLSPSD 187
Query: 122 CSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHD 179
C D I Y L+ +E+ + + + ++++DS ++R+ Y+ + R
Sbjct: 188 CLDNIAYAKAYNCDHQLELLVEATAMMSQARFALLIVDSATALYRSDYSGRGELSTRQMH 247
Query: 180 MRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L ++ + V+ TNQV S
Sbjct: 248 LCKFLRALQRIADTFGVAVVITNQVVS 274
>gi|289596168|ref|YP_003482864.1| DNA repair and recombination protein RadB [Aciduliprofundum boonei
T469]
gi|289533955|gb|ADD08302.1| DNA repair and recombination protein RadB [Aciduliprofundum boonei
T469]
Length = 227
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+ +G E DS+L GG G ITEL G +G GKT +CL ++ V++ V+YI TE +
Sbjct: 4 IKSGCESIDSLLNGGFERGCITELYGEAGSGKTNICLSTAIN--VAKEGHYVIYIDTEGI 61
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSI 160
R +QL +AK +I Y+F +E +E N + ++++DS+
Sbjct: 62 -SMERFSQLGGNEDIAK-----RILFYKVYKFSQQAEIIERAINLVEKRNDIILLIVDSM 115
Query: 161 AGIFRNTYA--EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPAL 218
+R ED ++ + L+ ++ K I VI TNQV M + K + +
Sbjct: 116 TEFYRAERGVEEDLSAKKRSSLAWQLSILNSIARKKNIAVIITNQVY--MDTTTKELRPI 173
Query: 219 G 219
G
Sbjct: 174 G 174
>gi|13161942|emb|CAC32998.1| putative DMC1 protein [Pleurotus ostreatus]
gi|13171056|emb|CAC33176.1| DMC1 homologue [Pleurotus ostreatus]
Length = 347
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 1 MNHTDQMLKL-GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEI-----VVSTGSEKFD 51
M Q+LK+ G E +V K+K+ K +F G I++ E +STGS+ D
Sbjct: 62 MTTRRQLLKIKGMSEAKVEKIKEAAHKILGSSFATG---IEIQEKRKRVNTISTGSKNVD 118
Query: 52 SILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTAR 107
IL GGI + ++E+ G GKTQL M + Q+ G V YI TE F R
Sbjct: 119 VILGGGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASGKVAYIDTEGTFRPDR 178
Query: 108 LAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENK-VGMIVIDSI 160
+ + E + + I + E I+ E F E+K ++++DSI
Sbjct: 179 IRSIAERFGVDGSLALENILYARAFNSEHQMELIN-----ECSMRFAEDKDFRLLIVDSI 233
Query: 161 AGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+FR Y+ + +R + + L +LS ++ I V+ TNQV S
Sbjct: 234 MALFRVDYSGRGELSERQQKLAQMLSRLTKLSEEYNIAVLLTNQVQS 280
>gi|225682824|gb|EEH21108.1| DNA repair protein RAD51 [Paracoccidioides brasiliensis Pb03]
gi|226290270|gb|EEH45754.1| DNA repair protein RAD51 [Paracoccidioides brasiliensis Pb18]
Length = 348
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ICITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D I Y + L S + E + ++
Sbjct: 161 IDTEGTFRPIRLLSVAQRYGLVGEEVLDNIAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R ++ + R + L L+ + I V+ TNQV SA
Sbjct: 221 IVDSATALYRTDFSGRGELSNRQIHLAKFMRALRRLADEFGIAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|300175731|emb|CBK21274.2| unnamed protein product [Blastocystis hominis]
Length = 292
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 11 GFQEWEVNKV----KDLKKKKAFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIHAGGIT 64
G E +V+K+ + ++ F G+ + + + I ++TGS D++L GGI IT
Sbjct: 15 GLSEAKVDKIMQACRTMQSTGIFYTGREMMQLRQRVIKITTGSSDLDTLLGGGIETMSIT 74
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKP 120
E+ G GKTQL +C++ Q+ G V+++ TE F R+ ++ L
Sbjct: 75 EIFGEFRTGKTQLAHTLCVTAQLPSEMHGANGKVIFLDTEGTFRPQRVVEIAGRYGLNGD 134
Query: 121 KCSDKIFITHCYEFIDLKRTLESQSGFI---ENKVGMIVIDSIAGIFRNTYA-EDKYVQR 176
+ D I + Y + + + I + ++V+DSI +FR Y+ + +R
Sbjct: 135 EVLDNILLARAYTHEQQMDVITAAAAKIVEDNSPYHLLVVDSITALFRVDYSGRGELAER 194
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L +L+ + + V+ NQVT+
Sbjct: 195 QQKLGRHLSALKKLAEEFNVAVVIINQVTA 224
>gi|327272568|ref|XP_003221056.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Anolis
carolinensis]
Length = 341
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ K F + ++V +STGS++FD +L GGI + ITE
Sbjct: 66 GLSEAKVEKIKEAANKLIEPGFLTAFEYSEKRKMVFHISTGSQEFDKLLGGGIESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV-SQPHKG--VLYICTESVFPTARLAQLCELSPLAKPKC 122
G GKTQL +C++ Q+ + G +++I TE+ F RL + +
Sbjct: 126 AFGEFRTGKTQLSHTICVTAQLPGADYTGGKIIFIDTENTFRPDRLRDIADRFNADHDAV 185
Query: 123 SDKIFITHCY------EFIDL-KRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 LDNVLYARAYTSEHQMELLDFVAAKFHEEPGIFK----LLIIDSIMALFRVDFSGRGELA 241
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + V TNQ+T+
Sbjct: 242 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 273
>gi|315230696|ref|YP_004071132.1| DNA repair and recombination RadB-like protein [Thermococcus
barophilus MP]
gi|315183724|gb|ADT83909.1| DNA repair and recombination RadB-like protein [Thermococcus
barophilus MP]
Length = 221
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
++TGS+ D +L GGI G +T++ GA GKT L++Q+ +KG V+YI TE
Sbjct: 4 LTTGSKSLDELLGGGIERGVLTQIYGAFATGKT------TLAMQIGMLNKGKVIYIDTEG 57
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
F RL + E + + K I ++F + KR + + N+ +IV+DS+
Sbjct: 58 GFSPERLKLMAEKRGIDPEETLQKFIIFEPHDFREQKRVISKLKTIVNNRFALIVVDSVT 117
Query: 162 GIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+R +D+ + L L L+ K+ I I NQV
Sbjct: 118 SHYR--IEKDRQSLNVELGKQL-QVLLWLARKYNIAAIVINQV 157
>gi|170181037|gb|ACB11495.1| RAD51 [Pinus sylvestris]
Length = 176
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +S+GS + D +L+GG+ G ITE+ G GKTQLC +C++ Q+ G L+
Sbjct: 11 IQISSGSRELDKLLEGGVETGSITEIYGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKALF 70
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ E L + + Y R LE+ S E + ++
Sbjct: 71 IDAEGTFRPQRLLQIAERFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMAETRFALM 130
Query: 156 VIDSIAGIFRNTY 168
++DS ++R +
Sbjct: 131 IVDSATSLYRTDF 143
>gi|50556100|ref|XP_505458.1| YALI0F15477p [Yarrowia lipolytica]
gi|49651328|emb|CAG78267.1| YALI0F15477p [Yarrowia lipolytica CLIB122]
Length = 329
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS + D++L GGI G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 89 ITLTTGSSQLDTLLGGGIETGAITEMFGEFRTGKSQLCHTLAVTCQLPIDQGGGEGKCLY 148
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL Q+ L + D + + + L+ + + +++ +
Sbjct: 149 IDTEGTFRPERLHQIARRYGLNGDEVLDNVAYARAHNSDHQMQLLQMAANMMTKSRFSCL 208
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTH 210
++DSI ++R YA + R + L L+ + I V+ TNQV + A+ +
Sbjct: 209 IVDSIMALYRTDYAGRGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGAVFN 268
Query: 211 SDKNIPALG 219
D P G
Sbjct: 269 PDPKKPIGG 277
>gi|358389137|gb|EHK26730.1| meiosis defective protein MEI3, partial [Trichoderma virens Gv29-8]
Length = 356
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 110 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 170 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 228
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 229 LIVDSATSLYRTDFTGRGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 288
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 289 AMFNPDPKKPIGG 301
>gi|90969177|gb|ABE02576.1| RAD51D splice variant g [Arabidopsis thaliana]
gi|90969191|gb|ABE02664.1| RAD51D splice variant g [Arabidopsis thaliana]
Length = 266
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+STG ++ DS+L+GG G +TEL G S GKTQ C+Q S V++ H G VLY+ T +
Sbjct: 89 LSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAAS--VAENHLGRVLYLDTGN 146
Query: 102 VFPTARLAQ-LCELSPLA-KPKCSDKIFITHCYEFI-------DLKRTLESQSGFIENKV 152
F R+AQ +C S K +I Y+ DL+ TL Q E+++
Sbjct: 147 SFSARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRL 206
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVI 199
++V+DSI+ + RA M + + L +L+ +H I ++
Sbjct: 207 RLLVVDSISSLITPILGGSGSQGRAL-MVAIGYLLKKLAHEHSIAIL 252
>gi|119614837|gb|EAW94431.1| RAD51 homolog C (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 305
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 96 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 155
Query: 95 LYICTESVFPTARLAQLCE-----LSPLAKPKCSDK----------------IFITHCYE 133
++I TE F R+ L L +A+ ++ I+ C +
Sbjct: 156 VFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRD 215
Query: 134 FIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS 191
+ +L + F+ +KV ++++D IA FR+ D R + LA + L+
Sbjct: 216 YTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGLAQQMISLA 273
Query: 192 IKHRIVVICTNQVTSAMTHSDKN----IPALG 219
HR+ VI TNQ+T T D+N +PAL
Sbjct: 274 NNHRLAVILTNQMT---TKIDRNQALLVPALA 302
>gi|73668572|ref|YP_304587.1| DNA repair and recombination protein RadB [Methanosarcina barkeri
str. Fusaro]
gi|72395734|gb|AAZ70007.1| DNA repair protein [Methanosarcina barkeri str. Fusaro]
Length = 243
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICT 99
E ++S+G + D +L GG G +T++ GA+G GKT +C+Q+ + V Q + V++I T
Sbjct: 23 EKLLSSGCKPLDELLGGGFEKGIVTQIFGAAGTGKTNVCIQLAVEC-VKQGQR-VIFIDT 80
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDS 159
E + PT R Q+ + + + I I F + + +G++++DS
Sbjct: 81 EGLSPT-RFKQIAGDNA---KELARSIIIYEPLNFEEQYAAVREVERIASENIGLVILDS 136
Query: 160 IAGIFRNTYAEDKYVQRAHDMRDLAH---YLHELSIKHRIVVICTNQVTSAMT 209
+R +D+ ++ R+LA YLH L+ K+ + TNQV S +T
Sbjct: 137 ATSYYRFELEDDETGMKSR--RELASQIGYLHALARKYGFAAVITNQVYSDIT 187
>gi|407926554|gb|EKG19521.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 326
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 79 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 138
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L+ S + E + ++
Sbjct: 139 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNSDHQLQLLQQASQMMTETRFSLL 198
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R +A + R + L L+ + I V+ TNQV SA
Sbjct: 199 IVDSATSLYRTDFAGRGELSARQVHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 258
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 259 MFNPDPKKPIGG 270
>gi|324512204|gb|ADY45060.1| DNA repair protein RAD51 A [Ascaris suum]
Length = 346
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLC---LQMC-LSLQVSQPHKGVLY 96
I + TGS + + +L GGI G ITE+ G GK+QLC MC L + + L+
Sbjct: 108 IQIETGSRELNRLLGGGIETGSITEVFGEFRTGKSQLCHTLAVMCQLPIDMGGAEGKCLW 167
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
I TE F RL + E L+ D + CY ++ +++ + E++ ++
Sbjct: 168 IDTEGTFRPERLLAVAERYKLSGQDVLDNVVYARCYNTDHQMQLLVQASAMMAESRYALL 227
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS +FR ++ + R + L +L+ + + V+ TNQV +
Sbjct: 228 VVDSATALFRTDFSGRGELAARQMLLGKFMRTLLKLADEFGVAVVITNQVVA 279
>gi|288869613|ref|ZP_05975231.2| DNA repair and recombination protein RadA [Methanobrevibacter
smithii DSM 2374]
gi|288860598|gb|EFC92896.1| DNA repair and recombination protein RadA [Methanobrevibacter
smithii DSM 2374]
Length = 314
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
+S GSE F+ ++ GGI ITE+ G G GK+Q+ ++ +++Q+ P KG L +I
Sbjct: 82 ISVGSEGFNDLIGGGIETQSITEVFGEFGSGKSQISHELAVTVQLP-PEKGGLDGECVFI 140
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE--NKVGMI 155
TE+ F R+ Q+ L + KI + + E + I+ N + ++
Sbjct: 141 DTENTFRPERIEQIANGFELDIDEVLQKIHVARAFNSSHQILMAEKINELIQQGNNIKLV 200
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ FR Y + R + H L +++ + + V TNQV +
Sbjct: 201 IVDSLMAHFRAEYVGRESLAVRQQKLNQHLHALQQIANTYNVAVFITNQVQA 252
>gi|7328532|dbj|BAA92869.1| Pprad51 [Penicillium paxilli]
Length = 347
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKRLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRFGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + + V+ TNQV SA
Sbjct: 221 IVDSATALYRTDFNGRGELSSRQTHLAKFLRTLQRLADEFGVAVVITNQVVAQVDGGPSA 280
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 281 MFNPDPKKPIGG 292
>gi|358396157|gb|EHK45544.1| meiosis defective protein MEI3, partial [Trichoderma atroviride IMI
206040]
Length = 351
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 104 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 164 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYN-SDHQLQLLNQAAAMMCETRFSL 222
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 223 LIVDSATSLYRTDFTGRGELSNRQTHLARFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 282
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 283 AMFNPDPKKPIGG 295
>gi|148643393|ref|YP_001273906.1| DNA repair and recombination protein RadA [Methanobrevibacter
smithii ATCC 35061]
gi|222445636|ref|ZP_03608151.1| hypothetical protein METSMIALI_01276 [Methanobrevibacter smithii
DSM 2375]
gi|166218764|sp|A5UMW0.1|RADA_METS3 RecName: Full=DNA repair and recombination protein RadA
gi|148552410|gb|ABQ87538.1| DNA repair protein RadA, RadA [Methanobrevibacter smithii ATCC
35061]
gi|222435201|gb|EEE42366.1| DNA repair and recombination protein RadA [Methanobrevibacter
smithii DSM 2375]
Length = 311
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL-----YI 97
+S GSE F+ ++ GGI ITE+ G G GK+Q+ ++ +++Q+ P KG L +I
Sbjct: 79 ISVGSEGFNDLIGGGIETQSITEVFGEFGSGKSQISHELAVTVQLP-PEKGGLDGECVFI 137
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE--NKVGMI 155
TE+ F R+ Q+ L + KI + + E + I+ N + ++
Sbjct: 138 DTENTFRPERIEQIANGFELDIDEVLQKIHVARAFNSSHQILMAEKINELIQQGNNIKLV 197
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS+ FR Y + R + H L +++ + + V TNQV +
Sbjct: 198 IVDSLMAHFRAEYVGRESLAVRQQKLNQHLHALQQIANTYNVAVFITNQVQA 249
>gi|406862778|gb|EKD15827.1| DNA repair protein rhp51 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 350
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G +TE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 103 ISITTGSKQLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L S + E + ++
Sbjct: 163 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNSDHQLQLLNQASAMMCETRFSLL 222
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 223 IVDSATSLYRTDFVGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPSA 282
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 283 MFNPDPKKPIGG 294
>gi|400601380|gb|EJP69023.1| putative RAD51 protein [Beauveria bassiana ARSEF 2860]
Length = 348
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 161 IDTEGTFRPVRLLSVANRFGLSGEEVLDNVAYARAYN-SDHQLQLLNQAAAMMCETRFSL 219
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + + V+ TNQV S
Sbjct: 220 LIVDSATALYRTDFCGRGELSNRQTHLAKFMRTLQRLADEFGVAVVITNQVVAQVDGGPS 279
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 280 AMFNPDPKKPIGG 292
>gi|349745394|gb|AEQ16523.1| meiotic recombination protein DMC1 [Zea mays]
Length = 344
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKLLNQGFMTGNDLLLKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S QV H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQVPIHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFKLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|242004733|ref|XP_002423233.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506212|gb|EEB10495.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 341
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 11 GFQEWEVNKVKDLKKK-------KAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGI 63
GF E +V+K+K+ K A +V + +I STGS++ D ++ GGI + I
Sbjct: 65 GFSEAKVDKIKEACAKIYTVHFSTALEVSNKRKQVFKI--STGSQELDKLIGGGIESMAI 122
Query: 64 TELSGASGCGKTQLCLQMCLSLQVSQP--HKG--VLYICTESVFPTARLAQLCELSPLAK 119
TE G GKTQ+ +C++ Q+ + G V+++ TE F RL + + L++
Sbjct: 123 TEAFGEFRTGKTQMSHTLCVTAQLPNDTGYTGGKVIFLDTEHTFRPDRLRLIADRFDLSQ 182
Query: 120 PKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFRNTYA-EDKYVQ 175
+ + Y + L+ + + G ++V+DSI +FR Y+ +
Sbjct: 183 EEVLGNVLYARAYTSEHQQELLDYVAAKFYEEAGIYKLLVVDSIMALFRVDYSGRGELAD 242
Query: 176 RAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
R + L L ++S ++ + V TNQ+T+
Sbjct: 243 RQQKLAQLMSRLQKISEEYNVAVFITNQMTA 273
>gi|91080339|ref|XP_974640.1| PREDICTED: similar to RAD51 homolog protein [Tribolium castaneum]
gi|270006418|gb|EFA02866.1| spindle A-like protein [Tribolium castaneum]
Length = 338
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L GGI G ITE+ G GKTQ+C + ++ Q++ G LY
Sbjct: 99 IQLTTGSKELDKLLGGGIETGSITEIFGEFRTGKTQICHTLAVTCQLALESGGGEGKCLY 158
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL--ESQSGFIENKVGM 154
I TE F RL + E + + D + + D + L + + +E++ +
Sbjct: 159 IDTEGTFRPERLLPVAERYNMDGQQVLDNVVFARAFN-TDHQTELLVHAAAMMMESRYCL 217
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAM 208
+++DS ++R Y+ + R + + L L+ + + V+ TNQV +AM
Sbjct: 218 LIVDSATSLYRTDYSGRGELSARQNHLARFLRMLLRLADEFGVAVVLTNQVVAQVDGAAM 277
Query: 209 THSDKNIPALG 219
++D P G
Sbjct: 278 FNADPKKPIGG 288
>gi|393216597|gb|EJD02087.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 527
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 38/201 (18%)
Query: 36 IDMTEIVVSTGSEKF-------DSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS 88
+D+ ++ G +KF D ++ GGI G + EL G S GKTQL LQ+ L +Q+
Sbjct: 67 VDIRNLLEEVGDDKFTTGDAVLDRVIGGGIRTGMVWELVGESASGKTQLALQLSLLVQL- 125
Query: 89 QPHKGVL-----YICTESVFPTARLAQLC--------------ELSPLAKPKCSDKIFIT 129
+P G L Y+ T + PT RL QL ++ ++ P F+
Sbjct: 126 RPALGGLSGSACYLTTHAKLPTKRLNQLILNHPLLSPSLCSLSDIHTVSAPTIE---FLL 182
Query: 130 HCYE--FIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLA 184
H F L+ L + V +IVIDSI+ +F NT + V +R+ + +L+
Sbjct: 183 HTLRNTFPALQDELRKDAK--RKPVRLIVIDSISTLF-NTPEKSSSVTLFERSKALYELS 239
Query: 185 HYLHELSIKHRIVVICTNQVT 205
+ +H ++ + I + N+VT
Sbjct: 240 NVMHTIAARDNIAFVVVNEVT 260
>gi|18857701|emb|CAD23442.1| putative RAD1 protein [Pleurotus ostreatus]
Length = 340
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 7/175 (4%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+E+V ++TG ++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G
Sbjct: 95 SELVHITTGXKQLDALLGGGIETGAITEMFGEFRTGKSQICHTLAVTCQLPVSMGGGEGK 154
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
LYI TE F RL + E L + D + Y + L S + + E++
Sbjct: 155 CLYIDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQNQLLTSATRLMSESRF 214
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++++DS ++R ++ + R + + L L+ + I V+ TNQV S
Sbjct: 215 CLLIVDSCTALYRTDFSGRGELSSRQNHLGKFLRTLQRLADEFGIAVVITNQVMS 269
>gi|219127959|ref|XP_002184192.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217404423|gb|EEC44370.1| Rad51 DNA recombination/repair protein [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 456
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 32/246 (13%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+ TG E D L+GG+ G ITEL G +G GKTQL +Q+C + S+ +G +Y+ TE
Sbjct: 160 LPTGLEPLDQALRGGVRVGTITELVGPAGVGKTQLAMQLC--IMASRYAQGCVYVDTEKK 217
Query: 103 FPTARLAQLCELSPLAKPKC---------SDKIFITHCYEFIDLKRT-LESQSGFIENKV 152
ARL ++ P SD + + R S ++N
Sbjct: 218 LSVARLREIALQRSSRVPDTNTHGEFLYPSDTTLVESTVDISATSRNCFRSPQEVLDNVT 277
Query: 153 --GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
ID + G + ED+ R H + + K + ++ + + +
Sbjct: 278 VHSPSNIDELFGAL--SEVEDELFSRNH------QSVGSSNAKFPVRLLVLDSIAAP--- 326
Query: 211 SDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNI------P 264
+ ++ A G E A + +A L ++ +H +VV+ NQV S++ +D I P
Sbjct: 327 ARRDFGA-GSAPELASTVIKIAQTLKRLADQHHLVVVVINQVGSSILGTDAVIDQTGIRP 385
Query: 265 ALGLSW 270
ALG SW
Sbjct: 386 ALGTSW 391
>gi|300710264|ref|YP_003736078.1| DNA repair and recombination protein RadB [Halalkalicoccus jeotgali
B3]
gi|448294589|ref|ZP_21484668.1| DNA repair and recombination protein RadB [Halalkalicoccus jeotgali
B3]
gi|299123947|gb|ADJ14286.1| DNA repair and recombination protein RadB [Halalkalicoccus jeotgali
B3]
gi|445586266|gb|ELY40548.1| DNA repair and recombination protein RadB [Halalkalicoccus jeotgali
B3]
Length = 247
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 35 PIDMTEIV---VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH 91
PID+ V +S G D +L GG+ G +T++ G GKT + L C +++ +
Sbjct: 8 PIDLISGVNDAISVGCPPIDDLLGGGVERGTVTQVYGPPAAGKTNVAL--CAAVECAAAG 65
Query: 92 KGVLYICTESVFPTARLAQLCELSPLAKPKC-SDKIFITHCYEFIDLKRTLESQSGFIEN 150
+ V YI TE + P R +L A + S +I ++ + F + ++ + E
Sbjct: 66 ERVAYIDTEGLSPD-RFERLLRAHGEADVETLSSRIVVSEAHTFEEQEQAVRDAEDLAE- 123
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAH---YLHELSIKHRIVVICTNQVTS 206
+V +IV+DS G +R ED+ + +R +A +L L+ KH + V+ TNQV S
Sbjct: 124 EVSLIVLDSATGFYRLQRTEDE--REGDALRSVARQVTHLLALARKHDLAVLLTNQVFS 180
>gi|148727864|gb|ABR08567.1| Dmc1 [Carassius auratus x Cyprinus carpio x Carassius cuvieri]
Length = 342
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKKK---AFQVGKN-PIDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K FQ + ++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVDKIKEAAGKLMICGFQTASEYSVKRKQVFHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + V++I +E+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDSENTFRPERLKDIADRFSVDHEA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E ++ + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLNFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|448383027|ref|ZP_21562456.1| DNA repair and recombination protein RadB [Haloterrigena
thermotolerans DSM 11522]
gi|445660207|gb|ELZ13004.1| DNA repair and recombination protein RadB [Haloterrigena
thermotolerans DSM 11522]
Length = 235
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYI 97
MT+ + TG D +L GG G +T+L G GKT L L ++Q + V+YI
Sbjct: 1 MTDEAIPTGCGPVDELLDGGFERGTVTQLYGPPAAGKTNLAL--SAAVQTAVDGGTVVYI 58
Query: 98 CTESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMI 155
TE V R QL E S + + +I I +F + + GF E + +I
Sbjct: 59 DTEGV-SVDRFQQLLEGSVDGEDLEAVASRIVIEDAVDFEEQAEAVRDAEGFAE-RAELI 116
Query: 156 VIDSIAGIFR--NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS G +R T D+ R + H L L+ KH + V+ TNQV S
Sbjct: 117 VLDSATGFYRLERTADGDEGEALRSVTRQVTHLLS-LARKHDLAVVLTNQVFS 168
>gi|344302624|gb|EGW32898.1| hypothetical protein SPAPADRAFT_136511 [Spathaspora passalidarum
NRRL Y-27907]
Length = 515
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 36 IDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVL 95
I E ++STG D L GGI G + E+ GASGCGK+ Q+ L Q + P +
Sbjct: 76 IPFDEQMISTGLPCIDEELGGGIPVGEVVEVFGASGCGKSHFLYQLLLQCQKTFPESTSV 135
Query: 96 YICTESVFPTARLAQLCE-LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI----EN 150
+I TES T R+A + L P I +C++ + L +Q + +
Sbjct: 136 HIATESFLETKRIADISSGLERSGVPVEMANISYIYCHDLVSQDHILYTQLPILLAQEKG 195
Query: 151 KVGMIVIDSIAGIFR 165
K +++IDSIA FR
Sbjct: 196 KTKLVIIDSIAQHFR 210
>gi|871832|dbj|BAA08255.1| recA-like protein [Arabidopsis thaliana]
Length = 342
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKKK---AFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + G + + ++VV +TG + D +
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKLVVKITTGCQALDDL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C++ Q+ KG V YI TE F R+
Sbjct: 119 LGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DSI +FR
Sbjct: 179 PIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAK--MSEEPFRILIVDSIIALFRV 236
Query: 167 TY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
+ + R + + L +++ + + V TNQV + M SD PA G
Sbjct: 237 DFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|365768471|gb|AEW90638.1| RAD51-like protein [Pinus sylvestris]
Length = 323
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +S+GS + D +L+GG+ G ITE+ G GKTQLC +C++ Q+ G L+
Sbjct: 103 IQISSGSRELDKLLEGGVETGSITEIYGEFRTGKTQLCHTLCITCQLPLDQGGGEGKALF 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENKVGMI 155
I E F RL Q+ E L + + Y R LE+ S E + ++
Sbjct: 163 IDAEGTFRPQRLLQIAERFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMAETRFALM 222
Query: 156 VIDSIAGIFRNTY 168
++DS ++R +
Sbjct: 223 IVDSATSLYRTDF 235
>gi|156937796|ref|YP_001435592.1| DNA repair and recombination protein RadA [Ignicoccus hospitalis
KIN4/I]
gi|166218760|sp|A8AB83.1|RADA_IGNH4 RecName: Full=DNA repair and recombination protein RadA
gi|156566780|gb|ABU82185.1| DNA repair and recombination protein RadA [Ignicoccus hospitalis
KIN4/I]
Length = 327
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 11/175 (6%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV-------- 94
++TGS+ D +L GGI ITE G G GK+QLC Q +++Q+ G+
Sbjct: 88 ITTGSKNLDDLLGGGIETKTITEFFGEFGSGKSQLCHQASVNVQLPLEQGGLSEGDKVAK 147
Query: 95 -LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
+Y+ TE F R+ Q+ + L + D I+ +E + + V
Sbjct: 148 AVYVDTEGTFRWERIEQMAKCLGLDPDQVMDNIYYIRAVNSDHQMAIVEELFNLVPKENV 207
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IV+DS+ FR Y + R + H L +L+ + VI TNQV +
Sbjct: 208 KLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLGKLAEVYNTAVIITNQVMA 262
>gi|124027840|ref|YP_001013160.1| DNA repair and recombination protein RadA [Hyperthermus butylicus
DSM 5456]
gi|123978534|gb|ABM80815.1| DNA repair and recombination protein [Hyperthermus butylicus DSM
5456]
Length = 323
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 22 DLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM 81
D++ K A +V K + +I +TGS D +L GGI ITE G G GKTQ+C Q+
Sbjct: 65 DIRFKTALEVKKERMQTRKI--TTGSRNLDDLLGGGIETKTITEFFGEFGSGKTQICHQL 122
Query: 82 CLSLQVSQPHKGV---------LYICTESVFPTARLAQLCELSPLAKPKCSDKIFI---- 128
+++Q+ G+ +YI TE F RL + + L + IF
Sbjct: 123 AVNVQLPIEKGGLSTQDRVAKAVYIDTEGTFRWERLENMAKRWGLDPDEVMSNIFYIRAI 182
Query: 129 --THCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAH 185
H +D E + + + ++++DS+ FR Y + R + H
Sbjct: 183 NSDHQMAIVD-----ELFNIVPKENIKLVIVDSVTSHFRAEYPGRENLAARQQKLNRHLH 237
Query: 186 YLHELSIKHRIVVICTNQVTS 206
L +L+ + + V+ TNQV +
Sbjct: 238 QLAKLAEVYDLAVVITNQVMA 258
>gi|85116816|ref|XP_965126.1| DNA repair protein RAD51 [Neurospora crassa OR74A]
gi|2182133|dbj|BAA20366.1| MEI3 [Neurospora crassa]
gi|28926929|gb|EAA35890.1| DNA repair protein RAD51 [Neurospora crassa OR74A]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 104 ISITTGSKNLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 164 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 222
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 223 LIVDSATSLYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 282
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 283 AMFNPDPKKPIGG 295
>gi|340383738|ref|XP_003390373.1| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog
[Amphimedon queenslandica]
Length = 343
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 11 GFQEWEVNKVKDLKKKKA---FQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K + F D +V ++TGS++ D +L GGI + ITE
Sbjct: 67 GISEAKVDKIKEAAGKLSSSDFLTALEYSDKRRMVFRIATGSQELDKLLGGGIESMAITE 126
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKG------VLYICTESVFPTARLAQLCELSPLAK 119
+ G GKTQL +C++ Q+ P K V++I TE+ F RL ++ + L
Sbjct: 127 VFGEFRTGKTQLSHTLCVTAQL--PGKNGYSGGKVVFIDTENTFRPDRLREIADRFNLDH 184
Query: 120 PKCSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-ED 171
D + Y E +D + + G + ++++DSI +FR ++
Sbjct: 185 TAMLDNVLYARAYTSEHQMELLDCVAAKFHEEPGVFK----LLIVDSIMALFRVDFSGRG 240
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ R + + L ++S ++ + V TNQ+T+
Sbjct: 241 ELADRQQKLAQMLSRLQKISEEYNVGVFVTNQMTA 275
>gi|318066037|ref|NP_001187314.1| meiotic recombination protein DMC1/LIM15 homolog [Ictalurus
punctatus]
gi|308322693|gb|ADO28484.1| meiotic recombination protein dmc1/lim15-like protein [Ictalurus
punctatus]
Length = 342
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKN-PIDMTEIV-VSTGSEKFDSILKGGIHAGGITE 65
G E +V K+K+ K FQ + ++ ++TGS +FD +L GG+ + ITE
Sbjct: 66 GLSEAKVEKIKEAAGKLLMSGFQTASEYSMKRKQVFHITTGSLEFDKLLGGGVESMAITE 125
Query: 66 LSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ + G +++I E+ F RL + + +
Sbjct: 126 AFGEFRTGKTQLSHTLCVTAQLPGENGYSGGKIIFIDAENTFRPDRLKDIADRFNVDHEA 185
Query: 122 CSDKIFITHCY------EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYV 174
D + Y E +D + G + +++IDSI +FR ++ +
Sbjct: 186 VLDNVLYARAYTSEHQMELLDFVAAKFHEEGGV---FKLLIIDSIMALFRVDFSGRGELA 242
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
+R + + L ++S ++ + V TNQ+T+ P G+T++
Sbjct: 243 ERQQKLAQMLSRLQKISEEYNVAVFVTNQMTAD--------PGAGMTFQ 283
>gi|389632217|ref|XP_003713761.1| DNA repair protein rhp51 [Magnaporthe oryzae 70-15]
gi|312283561|dbj|BAJ34646.1| DNA recombinational repair protein [Magnaporthe oryzae]
gi|351646094|gb|EHA53954.1| DNA repair protein rhp51 [Magnaporthe oryzae 70-15]
gi|440473931|gb|ELQ42700.1| hypothetical protein OOU_Y34scaffold00194g12 [Magnaporthe oryzae
Y34]
gi|440489122|gb|ELQ68800.1| hypothetical protein OOW_P131scaffold00217g12 [Magnaporthe oryzae
P131]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 104 ISITTGSKNLDTMLGGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L S + E + ++
Sbjct: 164 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNSDHQLQLLNQASAMMCETRFSLL 223
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + I V+ +NQV SA
Sbjct: 224 IVDSATALYRTDFLGRGELSSRQTHLAKFMRQLQRLADEFGIAVVISNQVVAQVDGGPSA 283
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 284 MFNPDPKKPIGG 295
>gi|355563673|gb|EHH20235.1| hypothetical protein EGK_03045 [Macaca mulatta]
Length = 340
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K F + ++V ++TGS++FD +L GGI + ITE
Sbjct: 64 GLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITE 123
Query: 66 LSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQL +C++ Q+ P +++I TE+ F RL + + +
Sbjct: 124 AFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDA 183
Query: 122 CSDKIFITHCY------EFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKY 173
D + Y E +D + ++G + +++IDSI +FR ++ +
Sbjct: 184 VLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGEL 239
Query: 174 VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L ++S ++ + +NQ+T+
Sbjct: 240 AERQQKLAQMLSRLQKISEEYNVAGFFSNQMTA 272
>gi|449662721|ref|XP_002167331.2| PREDICTED: DNA repair protein RAD51 homolog 3-like [Hydra
magnipapillata]
Length = 253
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 33/252 (13%)
Query: 22 DLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM 81
D +K A+ + K +T IV T S FD+++ GGI G ITE+ GA G GKTQ +Q+
Sbjct: 9 DKNQKSAYDLLKEEEFLTPIV--TFSAAFDNMIGGGIPIGKITEICGAPGTGKTQFGIQI 66
Query: 82 CLSLQVSQPHKGV----LYICTESVFPTARLAQLCELS-------PLAKPKCSDKIF--- 127
+S Q+ G+ L++ TE F T R ++ E + + + + S+ F
Sbjct: 67 AVSAQIPTLFGGIGGEALFVDTEGNFITERALEIAEAASKHIQDIAMEESELSNAAFGFT 126
Query: 128 ---------ITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYAEDKYVQR 176
+ C + DL S I KV ++++DSIA FR+ + ED + R
Sbjct: 127 KHCIMNGIHVARCLNYNDLMALSYILSDIILRHPKVKVVIVDSIAFHFRHEF-EDMGL-R 184
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNI-PALGLTYERAHDMRDLAHYL 235
+ L +++ +++I ++ NQ+T+ +T S + PALG ++ A R + L
Sbjct: 185 TRLLHTLVQSFMKVAYEYKIAIVLMNQMTTKLTESFSELAPALGQSWAHACTNRII---L 241
Query: 236 HEISIKHWIVVI 247
H ++ K IV I
Sbjct: 242 HSVNGKKLIVCI 253
>gi|402086982|gb|EJT81880.1| DNA repair protein rhp51 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GG+ G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 104 ISITTGSKNLDTLLAGGVETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 164 IDTEGTFRPVRLLAVANRFGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 222
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 223 LIVDSATSLYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 282
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 283 AMFNPDPKKPIGG 295
>gi|18181991|dbj|BAB83903.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|18181993|dbj|BAB83904.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|444313351|ref|XP_004177333.1| hypothetical protein TBLA_0A00120 [Tetrapisispora blattae CBS 6284]
gi|387510372|emb|CCH57814.1| hypothetical protein TBLA_0A00120 [Tetrapisispora blattae CBS 6284]
Length = 467
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 47/270 (17%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+TG K D +L GGI+ ITE+ G S GKTQ LQ+ L++Q+ G+ ++I T
Sbjct: 131 TTGDPKIDQLLNGGIYTHEITEVFGESSSGKTQFLLQLSLNVQLGIEKGGLDGSCVFITT 190
Query: 100 ESVFPTARLAQLCELSPLAKP----------KCSDKIFITHCYEFIDLKRTLESQSGFIE 149
E PT RL L + K +KI+ C + I L Q +
Sbjct: 191 EGDLPTRRLEDLIVENKKYKSYQFEKNDFLYYSQEKIYTVSCNDLISQDHILNVQLPILL 250
Query: 150 NK---VGMIVIDSIA-------GIFRNTYA------------EDKYVQRAHDMR---DLA 184
+ + +++IDSI+ I R Y +D Y Q + + + A
Sbjct: 251 ERNPNIKLVIIDSISHHMRVELQIPRKRYNNLNTKTHPKSNFDDMYRQIQDNKKYIDNSA 310
Query: 185 HYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTY-ERAHDMRDLAHYLHEISIKHW 243
L +LS K+ I ++ +NQV SDK + Y + D +L + +
Sbjct: 311 ENLLKLSHKYGISIVLSNQV------SDKPLKFYNNNYCPKIWDYEYQLGWLVGWNKRSI 364
Query: 244 IVVICTNQVTSAMT-HSDKNIPALGLSWSN 272
C N ++ T + +P LGL+WSN
Sbjct: 365 KARQCRNNRNNSYTLKVETQVPNLGLTWSN 394
>gi|336272433|ref|XP_003350973.1| RAD51 protein [Sordaria macrospora k-hell]
gi|380090740|emb|CCC04910.1| putative RAD51 protein [Sordaria macrospora k-hell]
Length = 353
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 104 ISITTGSKNLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 163
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 164 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 222
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 223 LIVDSATSLYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 282
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 283 AMFNPDPKKPIGG 295
>gi|154314604|ref|XP_001556626.1| hypothetical protein BC1G_04011 [Botryotinia fuckeliana B05.10]
gi|347831947|emb|CCD47644.1| similar to DNA repair protein RAD51 homolog 1 [Botryotinia
fuckeliana]
Length = 349
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G +TE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGVETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ E + +
Sbjct: 162 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAQMMCETRFSL 220
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 221 LIVDSATALYRTDFTGRGELSSRQMHLAKFMRMLQRLADEFGIAVVITNQVVAQVDGGPS 280
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 281 AMFNPDPKKPIGG 293
>gi|334350818|sp|P0CW91.1|RADA_AERPX RecName: Full=DNA repair and recombination protein RadA
gi|18181985|dbj|BAB83900.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18181995|dbj|BAB83905.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18181997|dbj|BAB83906.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18181999|dbj|BAB83907.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18182003|dbj|BAB83909.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|18182005|dbj|BAB83910.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689234|dbj|BAE96771.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689238|dbj|BAE96773.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689240|dbj|BAE96774.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689242|dbj|BAE96775.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689244|dbj|BAE96776.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689246|dbj|BAE96777.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|156053229|ref|XP_001592541.1| DNA repair protein rhp51 [Sclerotinia sclerotiorum 1980]
gi|154704560|gb|EDO04299.1| DNA repair protein rhp51 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 349
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G +TE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGVETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ E + +
Sbjct: 162 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAQMMCETRFSL 220
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 221 LIVDSATALYRTDFTGRGELSSRQMHLAKFMRMLQRLADEFGIAVVITNQVVAQVDGGPS 280
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 281 AMFNPDPKKPIGG 293
>gi|18182001|dbj|BAB83908.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|355758569|gb|EHH61497.1| hypothetical protein EGM_21060, partial [Macaca fascicularis]
Length = 253
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 17 VNKVKDLKKKKAFQV-GKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKT 75
V++ K + A+++ + D + +ST D L GG+ G +TE++G GCGKT
Sbjct: 56 VSRACAPKMQTAYEIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115
Query: 76 QLCLQMCLSLQVSQPHKG-----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT- 129
Q C+ M + L H G V+YI TES F RL ++ E +K+ +T
Sbjct: 116 QFCIMMSI-LATLPTHMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTS 174
Query: 130 ---HCYEFID----LKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
H Y + L+R + I + +++IDS+A + R +
Sbjct: 175 SKVHLYRELTCDEVLQRIESLEEEIISKGIRLVIIDSVASVVRKEF 220
>gi|115491801|ref|XP_001210528.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197388|gb|EAU39088.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 743
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP---HKGVLYICT 99
+ST D++L GGI G +TE++G S GKTQ L + L+ Q+ P +K +YI T
Sbjct: 286 ISTLDPALDALLHGGIPTGYLTEVTGESASGKTQFLLTLLLAAQLPAPRGLNKRAIYIST 345
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR-TLESQSGFIENK------- 151
E+ T+RL Q+ E P D + + + LESQ + +
Sbjct: 346 EAPIATSRLTQMLEFHPYLSTLSQDADIVPSLENILSINAMDLESQDHILNYQLPVAVSR 405
Query: 152 --VGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
VG+++IDSI +R ++ + R+ ++ L L L++K I ++ NQV+
Sbjct: 406 YNVGLVIIDSITSNYRAEHSSHNLLGLSTRSGELTKLGQMLRNLAVKEDIAIVVANQVS 464
>gi|84490269|ref|YP_448501.1| DNA repair and recombination protein RadA [Methanosphaera
stadtmanae DSM 3091]
gi|121731077|sp|Q2NE95.1|RADA_METST RecName: Full=DNA repair and recombination protein RadA
gi|84373588|gb|ABC57858.1| RadA [Methanosphaera stadtmanae DSM 3091]
Length = 311
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 19 KVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLC 78
K + + + AF+V + D+ I +TGS+ D ++ GGI ITE+ G G GK+Q+
Sbjct: 57 KAEKIDFETAFEVMERREDVGRI--TTGSKGLDELIGGGIETQSITEVYGEFGSGKSQIS 114
Query: 79 LQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYE- 133
++ ++ Q+ G V++I TE+ F R+ Q+ E L + KI + +
Sbjct: 115 HELSVTTQLPVEEGGLDGEVVFIDTENTFRPERIEQIAEGFGLNIEEVLKKIHVARAFNS 174
Query: 134 ----FIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLH 188
+ K QSG + +I+IDS+ FR Y + R + H L
Sbjct: 175 SHQILMADKINELIQSGV---NIKLIIIDSLMAHFRAEYVGRESLATRQQKLNQHLHTLQ 231
Query: 189 ELSIKHRIVVICTNQVTS 206
++ + + V+ TNQV S
Sbjct: 232 TIANTYNVAVLITNQVQS 249
>gi|18181987|dbj|BAB83901.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 RLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|156084788|ref|XP_001609877.1| Rad51 protein [Babesia bovis T2Bo]
gi|154797129|gb|EDO06309.1| Rad51 protein, putative [Babesia bovis]
Length = 346
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPID-----------MTEIVVSTGSEKFDSILKGGIH 59
G E +V K+K++ K+ P D + I +TGS D++L+GGI
Sbjct: 68 GLSEQKVAKIKEIVKELC------PPDICTAAEYLECRLNLIKFTTGSTALDALLQGGIE 121
Query: 60 AGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELS 115
+G ITE+ G GKTQLC + ++ Q+ G L+I T++ F RL +
Sbjct: 122 SGSITEIIGDFSTGKTQLCHTLAITSQLPIEQNGGEGKCLWIDTQNSFRPERLGPIANRF 181
Query: 116 PLAKPKCSDKIF---ITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AED 171
L+ +C I +++ + D+ +E+ +++ M+++DS ++R Y
Sbjct: 182 GLSHAECVANIVYVKVSNTEQQFDM--LVEAAHYMAQSRFAMLIVDSATALYRTDYTGRG 239
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV-------TSAMTHSDKNIPALG 219
+ R + L L+ + + V+ TNQV +S M +DK +P G
Sbjct: 240 ELAARQMSLGKYFRALKRLADIYGVAVVVTNQVMARVDNMSSFMGGNDK-VPVGG 293
>gi|159118412|ref|XP_001709425.1| DNA repair protein RAD51 [Giardia lamblia ATCC 50803]
gi|33667818|gb|AAQ24509.1| Dmc1a [Giardia intestinalis]
gi|157437541|gb|EDO81751.1| DNA repair protein RAD51 [Giardia lamblia ATCC 50803]
Length = 389
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 18/223 (8%)
Query: 11 GFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+ D +K F G ++ + + +STG D++L GGI + ITE
Sbjct: 121 GLSEAKVDKILDAARKHSQPGFMSGVVALERRQRIRRISTGCSDLDALLGGGIESMAITE 180
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDK 125
+ G GKTQLC + ++ Q+ V Y+ TE F ++ + E L +
Sbjct: 181 VFGEFRSGKTQLCHTIAVTAQLDGSR--VAYLDTEGTFRPEKIGPIAERYKLDPTTTLSR 238
Query: 126 IFITHCY---EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMR 181
I Y + I+L Q E K +++IDS+ +FR + + R +
Sbjct: 239 IAYARAYTHEQQIELLAAAAEQ--MSEKKFALLIIDSLTALFRVDFTGRGELADRQQKLG 296
Query: 182 DLAHYLHELSIKHRIVVICTNQVT-----SAMTHSDKNIPALG 219
L +L+ + I + TNQV +AM +D P G
Sbjct: 297 QHLASLAKLADEFNIAIFVTNQVMAQVDGAAMFTADPKKPIGG 339
>gi|46108550|ref|XP_381333.1| hypothetical protein FG01157.1 [Gibberella zeae PH-1]
gi|408395010|gb|EKJ74198.1| hypothetical protein FPSE_05637 [Fusarium pseudograminearum CS3096]
Length = 348
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G +Y
Sbjct: 101 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 161 IDTEGTFRPVRLLGVANRFGLSGEEVLDNVAYARAYN-SDHQLQLLNQAAAMMCETRFSL 219
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 220 LIVDSATSLYRTDFCGRGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 279
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 280 AMFNPDPKKPIGG 292
>gi|304315504|ref|YP_003850651.1| DNA repair and recombination protein RadA [Methanothermobacter
marburgensis str. Marburg]
gi|302588963|gb|ADL59338.1| DNA repair and recombination protein RadA [Methanothermobacter
marburgensis str. Marburg]
Length = 311
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 28 AFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV 87
AF V + D+ I +TGS+ D ++ GGI ITE+ G G GK+QL ++ +++Q+
Sbjct: 66 AFDVMERRKDVGRI--TTGSKALDELIGGGIETQAITEVFGEFGSGKSQLSHELAVTVQL 123
Query: 88 SQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLES 143
+ G+ ++I TE+ F R+ Q+ L + +KI I + E
Sbjct: 124 PEERGGLDAEAVFIDTENTFRPERIEQIANAFELDLEEVLNKIHIARAFNSSHQILMAEK 183
Query: 144 QSGFIEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ I+ + ++++DS+ FR Y + R + H L ++ + V
Sbjct: 184 VNELIQEGKNIRLVIVDSLTAHFRAEYVGREALATRQQKLNQHLHTLQNIANTYNAAVFV 243
Query: 201 TNQVTS 206
TNQV +
Sbjct: 244 TNQVQA 249
>gi|145352283|ref|XP_001420481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580715|gb|ABO98774.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 358
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+++G+ D+IL GG + ITE+ G CGKTQLC + ++ Q+ G V +I
Sbjct: 122 ITSGAAAVDAILGGGFESRAITEIYGEWRCGKTQLCHTIAVTTQMPVEMGGGCAKVAWID 181
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLES-QSGFIENKVGMIVI 157
TE+ F RL Q+ L + + + L + + E ++V+
Sbjct: 182 TENTFRGDRLVQIANRFGLDADAVLSNVMVARVDTVDQMMHALIAIGAKMAEEPFKLLVV 241
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI IFR Y A + +R + L +++ + + V+ TNQV S
Sbjct: 242 DSIMAIFRVDYVARGELSERQQTLNQFLSRLRKIAEEFNVAVVLTNQVQS 291
>gi|21227471|ref|NP_633393.1| DNA repair and recombination protein RadB [Methanosarcina mazei
Go1]
gi|20905843|gb|AAM31065.1| DNA repair protein [Methanosarcina mazei Go1]
Length = 248
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICT 99
E ++S+G + D +L GG G +T++ GA+G GKT +C+Q+ + V Q K V++I T
Sbjct: 28 EKLLSSGCKPLDELLGGGFERGIVTQVFGAAGTGKTNICIQLAVEC-VKQGQK-VIFIDT 85
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDS 159
E + P R Q+ + + + I I F + ++ VG++V+DS
Sbjct: 86 EGLSPV-RFKQIAGENA---KEIARSIIIYEPLSFEEQYSSVREVERIAGENVGLVVLDS 141
Query: 160 IAGIFRNTYAEDKY-VQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R +D+ ++ ++ + +LH L+ KH + TNQV S
Sbjct: 142 ATSYYRYELEDDETGIKSRRELANQIGFLHALARKHGFAALITNQVYS 189
>gi|336477843|ref|YP_004616984.1| DNA repair and recombination protein RadA [Methanosalsum zhilinae
DSM 4017]
gi|335931224|gb|AEH61765.1| DNA repair and recombination protein RadA [Methanosalsum zhilinae
DSM 4017]
Length = 325
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 17 VNKVKDLKKKKAFQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGK 74
+N + F+ G +D ++V ++TG +F+ +L GG+ ITEL G G GK
Sbjct: 54 INAARKSADIGGFETGDMVLDRRKLVGKLTTGCTEFNEMLGGGVETQSITELYGEFGSGK 113
Query: 75 TQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE-LSPLAKPKCSDKIFIT 129
TQ+ Q+ +++Q+ + G V+ I TE+ F R+AQ+ + LS + F+
Sbjct: 114 TQVAHQLAVNVQLPKEKGGLNGSVIMIDTENTFRPERIAQMVDGLSQKHGEDYDPEEFLK 173
Query: 130 HCYE-----------FIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY-AEDKYVQRA 177
H + D L ++ E V + ++DS+ FR Y R
Sbjct: 174 HIHVARAYNSNHQILLSDSASELANELKNTERPVRLFIVDSLTAHFRAEYVGRGTLADRQ 233
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ H L L VI TNQV S
Sbjct: 234 QKLNKHLHDLQRLGDLFNAAVIVTNQVMS 262
>gi|15679382|ref|NP_276499.1| DNA repair and recombination protein RadA [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3914551|sp|O27436.1|RADA_METTH RecName: Full=DNA repair and recombination protein RadA
gi|2622493|gb|AAB85860.1| DNA repair protein RadA [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 311
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 28 AFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV 87
AF V + D+ I +TGS+ D ++ GGI ITE+ G G GK+QL ++ +++Q+
Sbjct: 66 AFDVMERRKDVGRI--TTGSKALDELIGGGIETQAITEVFGEFGSGKSQLSHELAVTVQL 123
Query: 88 SQPHKGV----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLES 143
+ G+ ++I TE+ F R+ Q+ L + +KI I + E
Sbjct: 124 PEERGGLDAEAVFIDTENTFRPERIEQIANAFELDLEEVLNKIHIARAFNSSHQILMAEK 183
Query: 144 QSGFIEN--KVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVIC 200
+ I+ + ++++DS+ FR Y + R + H L ++ + V
Sbjct: 184 VNELIQEGKNIRLVIVDSLTAHFRAEYVGREALATRQQKLNQHLHTLQNIANTYNAAVFV 243
Query: 201 TNQVTS 206
TNQV +
Sbjct: 244 TNQVQA 249
>gi|342879606|gb|EGU80851.1| hypothetical protein FOXB_08718 [Fusarium oxysporum Fo5176]
Length = 348
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G +Y
Sbjct: 101 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 161 IDTEGTFRPVRLLGVANRFGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 219
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 220 LIVDSATSLYRTDFCGRGELSNRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 279
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 280 AMFNPDPKKPIGG 292
>gi|449432658|ref|XP_004134116.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
sativus]
gi|449504138|ref|XP_004162263.1| PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis
sativus]
Length = 345
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TGS+ D +L GGI ITE G GKTQL +C+S Q+ +G V Y
Sbjct: 107 VRITTGSQALDELLGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAY 166
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ + E + D I Y + L + + E ++
Sbjct: 167 IDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLL 226
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTH 210
++DSI +FR + + +R + + L +++ + + V TNQV + +
Sbjct: 227 IVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFV 286
Query: 211 SDKNIPALGLTYERAHDMR 229
SD PA G A +R
Sbjct: 287 SDPKKPAGGHVLAHAATVR 305
>gi|296108873|ref|YP_003615822.1| DNA repair and recombination protein RadA [methanocaldococcus
infernus ME]
gi|295433687|gb|ADG12858.1| DNA repair and recombination protein RadA [Methanocaldococcus
infernus ME]
Length = 320
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQ------------- 89
+STGS+ DSIL GG+ + + E +G G GKTQ+ Q C++LQ +
Sbjct: 79 LSTGSKNLDSILGGGLESQSVIEFAGPYGSGKTQIAHQACVNLQCPERIIADEKLKEEIL 138
Query: 90 PHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE 149
+ +YI TE F R+ ++ E L + I + Y E I+
Sbjct: 139 DNPKAVYIDTEGTFRPERIIEMAEAIGLDGKEVLKNIKVARAYNSDMQMLYAEKVEELIQ 198
Query: 150 --NKVGMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ ++++DS+ FR Y K +R + L++L+ + VV+ TNQV +
Sbjct: 199 KGENIRLVIVDSLTSTFRTEYTGRGKLAERQQKLGRHMATLNKLADLYNCVVLVTNQVAA 258
>gi|440639447|gb|ELR09366.1| DNA repair protein rhp51 [Geomyces destructans 20631-21]
Length = 349
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G +TE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + L+ + D + Y + L+ S + E + ++
Sbjct: 162 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNSDHQLQLLQLASQMMCETRFSLL 221
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------SA 207
++DS ++R + + R + L L+ + I V+ TNQV SA
Sbjct: 222 IVDSATSLYRTDFVGRGELASRQTHLGKFMRALQRLADEFGIAVVITNQVVAQVDGGPSA 281
Query: 208 MTHSDKNIPALG 219
M + D P G
Sbjct: 282 MFNPDPKKPIGG 293
>gi|387597245|gb|EIJ94865.1| DNA repair protein RAD51 [Nematocida parisii ERTm1]
Length = 341
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 8 LKLGFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELS 67
++LGFQ EV K L+ K +++TGS + D +L GGI G ITEL
Sbjct: 83 VELGFQTAEVVHQKRLQMK---------------MITTGSSELDKLLGGGIETGSITELF 127
Query: 68 GASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCS 123
G GKTQLC + ++ Q+ G +YI TE+ F + RL ++ + L
Sbjct: 128 GEFRTGKTQLCHMLAVTCQLPTELGGCNGKAVYIDTEATFRSERLIEIAKRYQLDPNVVL 187
Query: 124 DKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDM 180
+ + Y +D + L Q+G + + + ++DSI +R ++ + R +
Sbjct: 188 SNVCVARAYN-VDHQIELVKQAGSLMASGEYRLCIVDSIIAHYRTDFSGRGELSARQMHL 246
Query: 181 RDLAHYLHELSIKHRIVVICTNQV------TSAMTHSDKNIPALG 219
L +L+ ++ + ++ TNQV ++M D P G
Sbjct: 247 GVYLRSLMQLADEYNVAIVITNQVVAQVDGAASMFGGDTKKPTGG 291
>gi|222615516|gb|EEE51648.1| hypothetical protein OsJ_32955 [Oryza sativa Japonica Group]
Length = 391
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 17/246 (6%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
+ E + D I Y + L + E ++++DS+ +FR +
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDF 238
Query: 169 A-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLTYE 223
+ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 239 SGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLA 298
Query: 224 RAHDMR 229
A +R
Sbjct: 299 HAATIR 304
>gi|197092363|gb|ACH42254.1| RAD51C protein [Triticum aestivum]
Length = 270
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 33/206 (16%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS + IL GGIH +TE+ G G GKTQL +Q+ +++Q+ + G+ +YI
Sbjct: 11 ITTGSGDLNGILGGGIHCKEVTEIGGVPGIGKTQLGIQLAINVQIPVDYGGLGGKAIYID 70
Query: 99 TESVFPTARLAQLCE---------------LSPLAKPKCSDKIFITHCYEF--------I 135
TE F R+ Q+ E S + + F+ Y F I
Sbjct: 71 TEGSFMVERVYQIAEGCISDIMEYFPCHHDKSSSGQENLQPESFLAGIYYFRICSYTEQI 130
Query: 136 DLKRTLESQSGFIENK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKH 194
+ LE G E+K V +++IDS+ FR + D R + L+ L +LS +
Sbjct: 131 AVINYLEKFLG--EHKDVRIVIIDSVTFHFRQDF--DDLALRTRVLSGLSLKLMKLSKSY 186
Query: 195 RIVVICTNQVTSAMTHSDKNIP-ALG 219
+ V+ NQVT+ T + ALG
Sbjct: 187 NLAVVLLNQVTTKFTEGSFQLTLALG 212
>gi|433590479|ref|YP_007279975.1| DNA repair and recombination protein RadB [Natrinema pellirubrum
DSM 15624]
gi|448332122|ref|ZP_21521368.1| DNA repair and recombination protein RadB [Natrinema pellirubrum
DSM 15624]
gi|433305259|gb|AGB31071.1| DNA repair and recombination protein RadB [Natrinema pellirubrum
DSM 15624]
gi|445627771|gb|ELY81089.1| DNA repair and recombination protein RadB [Natrinema pellirubrum
DSM 15624]
Length = 235
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYI 97
MT+ + TG D +L GG G +T+L G GKT L L + V V+YI
Sbjct: 1 MTDEAIPTGCGPVDELLDGGFERGTVTQLYGPPAAGKTNLALSAAVQTAVGGGT--VVYI 58
Query: 98 CTESVFPTARLAQLCELSPLAK--PKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMI 155
TE V R QL E S + +I I +F + + GF E + +I
Sbjct: 59 DTEGV-SVDRFQQLLEGSVDGDDLEAVASRIVIEDAVDFEEQAEAVRDAEGFAE-RAELI 116
Query: 156 VIDSIAGIFR--NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS G +R T D+ R + H L L+ KH + V+ TNQV S
Sbjct: 117 VLDSATGFYRLERTADGDEGEALRSVTRQVTHLLS-LARKHDLAVVLTNQVFS 168
>gi|431904503|gb|ELK09886.1| DNA repair protein RAD51 like protein 2 [Pteropus alecto]
Length = 295
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQM----CLSLQVSQPHKGVLYIC 98
+ST D L+GG+ G +TE++G GCGKTQ C+ M L + V+YI
Sbjct: 115 LSTTLSALDEALRGGVACGSLTEITGPPGCGKTQFCIMMSVLATLPTNMGGLEGAVVYID 174
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y ++ L+R + I
Sbjct: 175 TESAFSAERLVEIAESRFPRYFNDEEKLLLTSSKVHLYRELNCDEVLQRIESLEEEIISK 234
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYL 187
V +++IDS+A + R + Q +MR+ +L
Sbjct: 235 GVKLVIIDSVASVVRKEFD----TQLEGNMRERNKFL 267
>gi|396462208|ref|XP_003835715.1| similar to DNA repair protein RAD51 homolog 1 [Leptosphaeria
maculans JN3]
gi|312212267|emb|CBX92350.1| similar to DNA repair protein RAD51 homolog 1 [Leptosphaeria
maculans JN3]
Length = 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 98 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F R + L+ + D + Y D + L +Q+ E + +
Sbjct: 158 IDTEGTFRPVRCLAVANRFGLSGEEVLDNVAYARAYN-SDHQLELLNQAAQMMTETRFSL 216
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R +A + R + L L+ + I V+ TNQV S
Sbjct: 217 LIVDSATSLYRTDFAGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 276
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 277 AMFNPDPKKPIGG 289
>gi|109689236|dbj|BAE96772.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMIVI 157
TE F R+ Q+ L + I+ ++ ++N + ++V+
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKNVNIKLVVV 205
Query: 158 DSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 206 DSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|255581709|ref|XP_002531657.1| X-ray repair cross complementing protein 3, xrcc3, putative
[Ricinus communis]
gi|223528715|gb|EEF30727.1| X-ray repair cross complementing protein 3, xrcc3, putative
[Ricinus communis]
Length = 301
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 100/256 (39%), Gaps = 57/256 (22%)
Query: 46 GSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTES 101
G D L GGI ITE+ SG GKTQLCLQ+ L Q+ G+ LY+ TE
Sbjct: 19 GCPILDRCLNGGIPCNSITEIVAESGTGKTQLCLQLSLYAQLPLSLGGLSASSLYLHTEF 78
Query: 102 VFPTARLAQLCELSPLAKPKC----------------SDKIFITHCYE---FIDLKRTLE 142
FP RL QL P+ D IF+ D+ +E
Sbjct: 79 PFPFRRLHQLSHSFQSQHPQIFINNNNNDTINNYDNPCDNIFVHSVRSADYLFDIMPKIE 138
Query: 143 SQSGFIEN--KVGMIVIDSIAGIFRNTY--AEDKYVQRAHDMRDLAHYLHELSIKHRIVV 198
S + + V +IVIDS+A +FR+ + +R+ ++ L L+ + + V
Sbjct: 139 SFLVYSKTHLPVRLIVIDSVAALFRSEFENTATDLKRRSALFFKISAKLRALAWRFNLAV 198
Query: 199 ICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTH 258
+ +NQV + D GL R D+ L +
Sbjct: 199 VVSNQVVDFVGSGD------GLNGARIGDLGSL------------------------YSS 228
Query: 259 SDKNIPALGLSWSNLI 274
+ PALGL+W+N +
Sbjct: 229 GRRVCPALGLAWANCV 244
>gi|357160971|ref|XP_003578935.1| PREDICTED: meiotic recombination protein DMC1 homolog [Brachypodium
distachyon]
Length = 345
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 60 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 119
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 120 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPLHMHGGNGKVAYIDTEGTFRPERIV 179
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 180 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 237
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 238 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 297
Query: 222 YERAHDMR 229
A +R
Sbjct: 298 LAHAATIR 305
>gi|197092367|gb|ACH42256.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
gi|222154115|gb|ACM47237.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQTLDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPLHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|222154113|gb|ACM47236.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPLHMHGGNGKVAYIGTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLVAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|308806876|ref|XP_003080749.1| DNA repair protein RAD51/RHP55 (ISS) [Ostreococcus tauri]
gi|116059210|emb|CAL54917.1| DNA repair protein RAD51/RHP55 (ISS) [Ostreococcus tauri]
Length = 420
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I+++TG K D +L+GGI +G +TE+ G GKTQL + ++ Q+ G LY
Sbjct: 181 IMITTGCAKVDEMLQGGIESGSVTEIYGEFRTGKTQLMHTLAVTCQLPIEQGGGEGKCLY 240
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL Q+ E + D + + L + +G + E + ++
Sbjct: 241 IDTEGTFRPQRLIQIAERFQMDPGPVLDNVAYAKAHNTEHQTELLVAAAGMMAETRFALM 300
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDS+ ++R Y + R + L L+ + + VI +NQV +
Sbjct: 301 IIDSVTNLYRTEYEGRGELSARQMHLGKFLRQLARLADEFGVAVIVSNQVVA 352
>gi|7229683|gb|AAF42940.1|AF234170_1 DMC1 protein [Hordeum vulgare]
gi|326513156|dbj|BAK06818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|400202051|gb|AFP73609.1| disrupted meiotic cDNA1 protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPLHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|115484153|ref|NP_001065738.1| Os11g0146800 [Oryza sativa Japonica Group]
gi|21322144|gb|AAK55555.2|AF375982_1 Dmc1 [Oryza sativa Japonica Group]
gi|14588672|dbj|BAB61838.1| RiLIM15B [Oryza sativa]
gi|18700485|dbj|BAB85214.1| DMC1 [Oryza sativa Japonica Group]
gi|21805945|gb|AAM76792.1| Dmc1 protein type B [Oryza sativa Indica Group]
gi|113644442|dbj|BAF27583.1| Os11g0146800 [Oryza sativa Japonica Group]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|449666109|ref|XP_002158412.2| PREDICTED: meiotic recombination protein DMC1/LIM15 homolog [Hydra
magnipapillata]
gi|11994855|dbj|BAB19960.1| DMC1 homologue CnDMC1 [Hydra vulgaris]
Length = 331
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 11 GFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIV-----VSTGSEKFDSILKGGIHAGGITE 65
G E +V+K+K+ K ++ +EI +STGS + D +L GGI + ITE
Sbjct: 55 GISEAKVDKIKEAVAKCCSSGFFTALEYSEIRKQCFRISTGSMELDKLLGGGIESMSITE 114
Query: 66 LSGASGCGKTQLCLQMCLSLQVSQPHK----GVLYICTESVFPTARLAQLCELSPLAKPK 121
G GKTQ+ +C++ Q+ P+ V++I TE+ F RL + + L
Sbjct: 115 AFGEFRTGKTQISHTLCVTAQLPGPNNYPGGKVMFIDTENTFRPNRLRSIADRFNLDHEA 174
Query: 122 CSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIVIDSIAGIFRNTYA-EDKYVQRA 177
I Y L+ S + G +++IDSI +FR Y+ + R
Sbjct: 175 MLGNIVFCRAYTSEQQFEVLDMVSAKFHEEAGVFKLLIIDSIMALFRVDYSGRGELADRQ 234
Query: 178 HDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + L ++S ++ + V TNQ+T+
Sbjct: 235 QKLGQMLSKLQKISEEYNVAVWITNQMTA 263
>gi|407461587|ref|YP_006772904.1| recombinase A [Candidatus Nitrosopumilus koreensis AR1]
gi|407045209|gb|AFS79962.1| recombinase A [Candidatus Nitrosopumilus koreensis AR1]
Length = 215
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 22/171 (12%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++STG EK D L GGI G I ++ G +G GKTQL LQ+ ++ + H VLY T
Sbjct: 1 MISTGLEKIDKFLSGGIPDGVIVDIFGKNGTGKTQLLLQLAINSIKNGGH--VLYFDTTG 58
Query: 102 VFPTARLAQL-----CELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIV 156
F R+ ++ +L L + S +T+ E I+ + I+N +IV
Sbjct: 59 GFRPERILEIQKKSETQLDLLNQITVSR---LTNTSEQINSIKN-------IDNNFSLIV 108
Query: 157 IDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELS---IKHRIVVICTNQV 204
ID++ +F Y +D+ V + + Y+ +LS I +I V+ TN +
Sbjct: 109 IDNVTDLFSYEYKKDESVFEKNSL--FMKYMQKLSYLAISKKIPVVVTNMI 157
>gi|222154111|gb|ACM47235.1| disrupted meiotic cDNA 1 protein [Triticum aestivum]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPLHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|147805615|emb|CAN71783.1| hypothetical protein VITISV_028799 [Vitis vinifera]
Length = 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYITGSDALLRRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ +G V YI TE F R+
Sbjct: 119 LGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAK--MSEEPFRLLIVDSVIALFRV 236
Query: 167 TY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
+ + R + + L +++ + + V TNQV + + SD PA G
Sbjct: 237 DFTGRGELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|359477566|ref|XP_002279369.2| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein DMC1
homolog [Vitis vinifera]
Length = 361
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKKK---AFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYITGSDALLRRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ +G V YI TE F R+
Sbjct: 119 LGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAK--MSEEPFRLLIVDSVIALFRV 236
Query: 167 TY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
+ + R + + L +++ + + V TNQV + + SD PA G
Sbjct: 237 DFTGRGELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|297737116|emb|CBI26317.3| unnamed protein product [Vitis vinifera]
Length = 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYITGSDALLRRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ +G V YI TE F R+
Sbjct: 119 LGGGIETSAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDAGAVLDNIIYARAYTYEHQYNLLLGLAAK--MSEEPFRLLIVDSVIALFRV 236
Query: 167 TY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
+ + R + + L +++ + + V TNQV + + SD PA G
Sbjct: 237 DFTGRGELADRQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|448119334|ref|XP_004203706.1| Piso0_000722 [Millerozyma farinosa CBS 7064]
gi|359384574|emb|CCE78109.1| Piso0_000722 [Millerozyma farinosa CBS 7064]
Length = 540
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 36/231 (15%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKGVLYICTE 100
+ +G D+IL GGI + GITE+ G+SG GKTQL L + + Q+ S+P+ +Y+ TE
Sbjct: 94 LKSGIPGLDTILGGGIPSPGITEIFGSSGTGKTQLLLTLAVRAQLSDSKPNNKCVYVSTE 153
Query: 101 SVFPTARLAQLCE-LSPLAKPKCS-DKIFITHCYE--------FIDLKRTLESQSGFIEN 150
S + RL + E + + K S + I +C + F L LE++ G
Sbjct: 154 SQLASQRLDTMVETFNKNNENKVSMENISYIYCPDIETQDHALFTQLPIKLENEKG---- 209
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
V +++IDSI +++R + ++ L L K + N+ M H
Sbjct: 210 NVKVVIIDSIG----------HHLRREEVIESTSYLLEHL--KQQEGYSAYNRQFLEMRH 257
Query: 211 SD----KNIPALGLTYER----AHDMRDLAHYLHEISIKHWIVVICTNQVT 253
+ K I L+Y R + ++ + +L+ ++ K+ +VV+ +NQV+
Sbjct: 258 AQEKQVKRISNSTLSYRRRSKKSQYLKIIYRHLNRLAKKYNLVVLLSNQVS 308
>gi|449020076|dbj|BAM83478.1| DNA recombination protein DMC1 [Cyanidioschyzon merolae strain 10D]
Length = 407
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 11 GFQEWEVNKVKDLKKKKA----FQVGKNPIDMTEIV--VSTGSEKFDSILKGGIHAGGIT 64
G E +V+K+ + A ++ G + + + V + TGS+ D++L GG+ + IT
Sbjct: 133 GLSEAKVDKIMAAARTAAGDVSYRSGTECLAVRQRVFHLRTGSDALDTLLGGGLESASIT 192
Query: 65 ELSGASGCGKTQLCLQMCLSLQVS-QPHKG-VLYICTESVFPTARLAQLCELSPLAKPKC 122
E+ G CGKTQLC + ++ Q + + H G V+YI TE F R+ + +
Sbjct: 193 EVYGEYRCGKTQLCHTLAVTAQAADESHAGRVVYIDTEGNFRPERIRAIATRFSIDADDV 252
Query: 123 SDKIFITHCY---EFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAH 178
+ I Y + ++L R E+ + E++ ++++DS ++R Y+ + R
Sbjct: 253 LENIAHARAYTTDQQLELLR--EAAALMCESRFALVIVDSATALYRVDYSGRGELSARQQ 310
Query: 179 DMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ L +L+ + + + TNQV +
Sbjct: 311 HLNQFMSTLGKLAEEFNVCALVTNQVQA 338
>gi|14600463|ref|NP_146978.1| DNA repair and recombination protein RadA [Aeropyrum pernix K1]
gi|334350817|sp|P0CW92.1|RADA_AERPE RecName: Full=DNA repair and recombination protein RadA
gi|5103509|dbj|BAA79030.1| DNA repair and recombination protein RadA [Aeropyrum pernix K1]
Length = 319
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +Y+
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYVD 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|109689248|dbj|BAE96778.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689250|dbj|BAE96779.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689252|dbj|BAE96780.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
gi|109689254|dbj|BAE96781.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GG+ ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGVETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRAEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|18461375|gb|AAL71908.1|AF265549_1 meiotic protein Dmc1B [Oryza sativa Indica Group]
Length = 344
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|84996361|ref|XP_952902.1| DNA repair (Rad51 homologue) protein [Theileria annulata strain
Ankara]
gi|65303899|emb|CAI76278.1| DNA repair (Rad51 homologue) protein, putative [Theileria annulata]
Length = 369
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS + D +L+GG+ G ITE+ G GK+QLC + ++ Q+ G L+
Sbjct: 103 IKFTTGSSQLDKLLQGGVETGSITEIIGEFKTGKSQLCHTLAVTCQLPVEQSGGEGKCLW 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
+ +E F R+ + + L+ C D + Y L+ +E+ + + + ++
Sbjct: 163 VDSEGTFRPERIVSIAKRFGLSPSDCLDNVAYARAYNTDHQLELLVEASAMMAQTRFALL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y+ + R + L ++ + V+ TNQV +
Sbjct: 223 IVDSATSLYRSDYSGRGELASRQMHLCKFLRALQRIADTFGVAVVITNQVVA 274
>gi|346320802|gb|EGX90402.1| DNA repair protein RAD51 [Cordyceps militaris CM01]
Length = 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TEL G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKNLDTLLAGGIETGSVTELFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL L+ + D + Y D + L +Q+ + E + +
Sbjct: 161 IDTEGTFRPVRLLATANRFGLSGEEVLDNVAYARAYN-SDHQLQLLNQAATMMCETRFSL 219
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + + V+ TNQV S
Sbjct: 220 LIVDSATALYRTDFCGRGELSNRQTHLAKFMRTLQRLADEFGVAVVITNQVVAQVDGGPS 279
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 280 AMFNPDPKKPIGG 292
>gi|330919603|ref|XP_003298683.1| hypothetical protein PTT_09464 [Pyrenophora teres f. teres 0-1]
gi|311328005|gb|EFQ93221.1| hypothetical protein PTT_09464 [Pyrenophora teres f. teres 0-1]
Length = 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+QLC + ++ Q+ G +Y
Sbjct: 98 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQLCHTLAVTCQLPFDMGGGEGKCIY 157
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F R + L+ + D + Y D + L +Q+ E + +
Sbjct: 158 IDTEGTFRPVRCLAVANRFGLSGEEVLDNVAYARAYN-SDHQLELLNQAAQMMTETRFSL 216
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+V+DS ++R + + R + L L+ + I VI TNQV S
Sbjct: 217 LVVDSAMALYRTDFVGRGELSARQTHLAKFMRTLQRLADEFGIAVIITNQVVAQVDGGPS 276
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 277 AMFNPDPKKPIGG 289
>gi|327353831|gb|EGE82688.1| meiotic recombination protein dmc1 [Ajellomyces dermatitidis ATCC
18188]
Length = 358
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK---------KAFQVGKNPIDMTEIVVSTGSEKFDSILKG 56
+LK+ GF E +V K+K+ +K A ++G + I STGS++FDSIL G
Sbjct: 54 LLKIKGFSEVKVEKIKEAIQKCQPSASGFITAMELGHQRKRVVRI--STGSKQFDSILAG 111
Query: 57 GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLC 112
G + I+E+ G CGKTQL M + Q+ + G V YI TE F R+AQ+
Sbjct: 112 GFQSMSISEVYGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIAQIA 171
Query: 113 ELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTY 168
E + + I ++L TL + F + +++IDSI FR Y
Sbjct: 172 ERFGVDPDSALENIAYARALNSEHQLELLNTLAKE--FAGGEYRLLIIDSIMNCFRVDY 228
>gi|18181989|dbj|BAB83902.1| homologue of the bacterial recA and yeast RAD51/DMC1 [Aeropyrum
pernix]
Length = 319
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TGS D +L GGI ITEL G G GKTQ+C Q+ +++Q+ + G+ +YI
Sbjct: 86 ITTGSRNLDELLGGGIETKTITELFGEFGSGKTQICHQLSVNVQLPEDKGGLEGKAVYID 145
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT------HCYEFIDLKRTLESQSGFIENKV 152
TE F R+ Q+ L + I+ H +D T+ + +
Sbjct: 146 TEGTFRWERIEQMARGVGLDPDEVMKNIYWIRAINSHHQIAIVDKLFTMVKN-----DNI 200
Query: 153 GMIVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++V+DS+ FR + + R + H L L+ + V+ TNQV +
Sbjct: 201 KLVVVDSVTSHFRVEFPGRENLAMRQQLLNRHLHQLMRLADIFNVAVVITNQVMA 255
>gi|71028444|ref|XP_763865.1| DNA repair protein Rad51 [Theileria parva strain Muguga]
gi|68350819|gb|EAN31582.1| DNA repair protein rad51, putative [Theileria parva]
Length = 343
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS + D +L+GG+ G ITE+ G GK+QLC + ++ Q+ G L+
Sbjct: 103 IKFTTGSAQLDKLLQGGVETGSITEIIGEFKTGKSQLCHTLAVTCQLPVEQSGGEGKCLW 162
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVGMI 155
+ +E F R+ + + L+ C D + Y L+ +E+ + + + ++
Sbjct: 163 VDSEGTFRPERIVSIAKRFGLSPSDCLDNVAYARAYNTDHQLELLVEASAMMAQTRFALL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y+ + R + L ++ + V+ TNQV +
Sbjct: 223 IVDSATSLYRSDYSGRGELASRQMHLCKFLRALQRIADTFGVAVVITNQVVA 274
>gi|226501424|ref|NP_001141379.1| meiotic recombination protein DMC1 isoform 1 [Zea mays]
gi|194698360|gb|ACF83264.1| unknown [Zea mays]
gi|194704244|gb|ACF86206.1| unknown [Zea mays]
gi|195626386|gb|ACG35023.1| meiotic recombination protein DMC1 [Zea mays]
gi|414882036|tpg|DAA59167.1| TPA: meiotic recombination protein DMC1 isoform 1 [Zea mays]
gi|414882037|tpg|DAA59168.1| TPA: meiotic recombination protein DMC1 isoform 2 [Zea mays]
Length = 344
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKNLTGIKGLSEAKVDKICEAAEKLLNQGFMTGNDLLLKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFKLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|14669856|dbj|BAB62025.1| RiLIM15B [Oryza sativa]
Length = 344
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 1 MNHTDQMLK--LGFQEWEVNKVKDLKKK---KAFQVGKNPIDMTEIVV--STGSEKFDSI 53
M HT + L G E +V+K+ + +K + F G + + + VV +TGS+ D +
Sbjct: 59 MMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDEL 118
Query: 54 LKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVS-QPHKG---VLYICTESVFPTARLA 109
L GGI ITE G GKTQL +C+S Q+ H G V YI TE F R+
Sbjct: 119 LGGGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIV 178
Query: 110 QLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMIVIDSIAGIFRN 166
+ E + D I Y + +L L ++ E ++++DS+ +FR
Sbjct: 179 PIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAK--MAEEPFRLLIVDSVIALFRV 236
Query: 167 TYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTHSDKNIPALGLT 221
++ + +R + + L +++ + + V TNQV + M +D PA G
Sbjct: 237 DFSGRGELAKRQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHV 296
Query: 222 YERAHDMR 229
A +R
Sbjct: 297 LAHAATIR 304
>gi|238684533|gb|ACR54434.1| Rad51 [Mytilus edulis]
Length = 279
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 10/174 (5%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D +L+GGI G ITE+ G GKTQL + ++ Q+ G LY
Sbjct: 101 IQITTGSKELDKLLQGGIETGSITEIFGEFRTGKTQLTHTLAVTCQLPIDMGGGEGKALY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I +E F RL + E L+ D + Y D + L Q+ + E++ +
Sbjct: 161 IDSEGTFRPERLLAVAERYGLSGSDVLDNVAYARAYNS-DHQTQLLVQAAAMMSESRYAL 219
Query: 155 IVIDSIAGIFRNTYA--EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R Y+ + ++ H R L L L+ ++ + V+ TNQV +
Sbjct: 220 LIVDSATSLYRTDYSGRGELSARQVHLARFL-RMLLRLADEYGVAVVITNQVVA 272
>gi|189197611|ref|XP_001935143.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187981091|gb|EDU47717.1| DNA repair protein RAD51 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 341
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 7 MLKL-GFQEWEVNKVKDLKKK--------------KAFQVGKNPIDMTEIVVSTGSEKFD 51
+LK+ GF E +V+KVKD K A ++G++ + I +STGS+ D
Sbjct: 55 LLKIKGFSEIKVDKVKDAIGKCQVEYCTPSGGGFQTAHELGQHRKRV--IKISTGSKALD 112
Query: 52 SILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTAR 107
++L GG I+E+ G CGKTQL M + Q+ + G V YI T F R
Sbjct: 113 AVLGGGFQTMSISEVFGEFRCGKTQLSHTMSVITQLPKDMGGAEGKVAYIGT---FRPER 169
Query: 108 LAQLCELSPLAKPKCSDKIFITHC----YEFIDLKRTLESQSGFIENKVGMIVIDSIAGI 163
+AQ+ E + D I ++ L + E F+ N+ +++IDSI +
Sbjct: 170 IAQIAERFGVDPETAQDNITYARAVNSEHQMELLNKVAEF---FVSNEYRLLIIDSIMAL 226
Query: 164 FRNTY-AEDKYVQRAHDMRD-LAHYLHELSIKHRIVVICTNQVTS 206
FR Y + +R + L+ H + + V+ TNQV S
Sbjct: 227 FRVDYTGRGELNERQQKLNQFLSKLTHVAEAEFNVAVLLTNQVQS 271
>gi|329766734|ref|ZP_08258277.1| RecA/RadA recombinase-like protein [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329136989|gb|EGG41282.1| RecA/RadA recombinase-like protein [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 219
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++STG +K D L GI G IT++ GASG GKTQL Q+C++ + VLY T
Sbjct: 1 MISTGLQKLDDFLSDGIPNGVITDIYGASGTGKTQLLFQICVN--TIKNGGTVLYQDTTG 58
Query: 102 VFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIA 161
F R+ ++ + L +KI I+ D ++++ + + +I+ID+I
Sbjct: 59 SFRPERILEIQKKQNLT-FDILEKITISRITNTSDQIKSIDMMNS---SNFSLIIIDNIT 114
Query: 162 GIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
+F Y+ EDK ++ H L ++I +I +I TN +
Sbjct: 115 DLFSYEYSKEDKTFEKNSLFIRYIHNLSLVAINKKIPIIITNMI 158
>gi|253741848|gb|EES98708.1| Dmc1b [Giardia intestinalis ATCC 50581]
Length = 368
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLC--LQMCLSLQVSQPHKG--VLYIC 98
+STG F+++L GG+ ITE+ G GKTQLC L + L VS+ G +YI
Sbjct: 131 LSTGCTDFNTLLGGGVETMSITEVFGEFRTGKTQLCHTLAVTAQLPVSKGGGGGKTVYID 190
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF----IENKVGM 154
TE F ++A + E L K D I + Y ++ +E + IE++ +
Sbjct: 191 TEGTFRPEKVAPIAERFGLNPKKALDNIIVARVYTH---EQQIECITALPKLMIESQFAL 247
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-----SAM 208
++IDSI +FR + + R + L +L+ + + + TNQV +AM
Sbjct: 248 VIIDSITALFRVDFTGRGELADRQQKLGQHLAGLAKLADEFNLAIFVTNQVMAQVDGAAM 307
Query: 209 THSDKNIPALG 219
+D P G
Sbjct: 308 FTADPKKPIGG 318
>gi|171680227|ref|XP_001905059.1| hypothetical protein [Podospora anserina S mat+]
gi|170939740|emb|CAP64966.1| unnamed protein product [Podospora anserina S mat+]
Length = 348
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GGI G +TE+ G GK+Q+C + ++ Q+ G +Y
Sbjct: 101 ISITTGSKNLDTLLAGGIETGSVTEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCMY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGM 154
I TE F RL + L+ + D + Y D + L +Q+ + E + +
Sbjct: 161 IDTEGTFRPVRLLAVANRYGLSGEEVLDNVAYARAYNS-DHQLQLLNQAAAMMCETRFSL 219
Query: 155 IVIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-------S 206
+++DS ++R + + R + L L+ + I V+ TNQV S
Sbjct: 220 LIVDSATSLYRTDFLGRGELSSRQTHLAKFMRTLQRLADEFGIAVVITNQVVAQVDGGPS 279
Query: 207 AMTHSDKNIPALG 219
AM + D P G
Sbjct: 280 AMFNPDPKKPIGG 292
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,183,510,461
Number of Sequences: 23463169
Number of extensions: 159334048
Number of successful extensions: 535538
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2083
Number of HSP's successfully gapped in prelim test: 1586
Number of HSP's that attempted gapping in prelim test: 531354
Number of HSP's gapped (non-prelim): 4317
length of query: 279
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 139
effective length of database: 9,074,351,707
effective search space: 1261334887273
effective search space used: 1261334887273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 76 (33.9 bits)