Your job contains 1 sequence.
>psy2198
MNHTDQMLKLGFQEWEVNKVKDLKKKKAFQVGKNPIDMTEIVVSTGSEKFDSILKGGIHA
GGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKP
KCSDKIFITHCYEFIDLKRTLESQSGFIENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDM
RDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISI
KHWIVVICTNQVTSAMTHSDKNIPALGLSWSNLIILLNH
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2198
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-050320-116 - symbol:xrcc3 "X-ray repair com... 279 2.0e-24 1
FB|FBgn0003480 - symbol:spn-B "spindle B" species:7227 "D... 259 2.6e-22 1
UNIPROTKB|O43542 - symbol:XRCC3 "DNA repair protein XRCC3... 258 3.4e-22 1
UNIPROTKB|Q5ZM26 - symbol:XRCC3 "Uncharacterized protein"... 258 3.4e-22 1
UNIPROTKB|F1S9W9 - symbol:XRCC3 "Uncharacterized protein"... 256 5.5e-22 1
UNIPROTKB|E2RAE7 - symbol:XRCC3 "Uncharacterized protein"... 247 4.9e-21 1
UNIPROTKB|Q08DH8 - symbol:XRCC3 "DNA repair protein XRCC3... 240 2.7e-20 1
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 222 2.3e-18 1
MGI|MGI:1921585 - symbol:Xrcc3 "X-ray repair complementin... 220 5.4e-18 1
TAIR|locus:2825233 - symbol:RAD51D "homolog of RAD51 D" s... 217 7.5e-18 1
RGD|1306849 - symbol:Xrcc3 "X-ray repair complementing de... 217 1.2e-17 1
ZFIN|ZDB-GENE-041010-204 - symbol:rad51c "rad51 homolog C... 151 3.7e-17 2
DICTYBASE|DDB_G0273611 - symbol:rad51-2 "putative DNA rep... 213 3.7e-17 1
DICTYBASE|DDB_G0273139 - symbol:rad51-1 "putative DNA rep... 213 3.7e-17 1
POMBASE|SPAC20H4.07 - symbol:rad57 "RecA family ATPase Ra... 195 1.0e-16 2
TAIR|locus:2147092 - symbol:RAD51 species:3702 "Arabidops... 198 1.7e-15 1
ZFIN|ZDB-GENE-040426-2750 - symbol:rad51b "RAD51 homolog ... 195 2.6e-14 1
UNIPROTKB|G4MNW7 - symbol:MGG_06985 "Uncharacterized prot... 188 1.6e-13 2
UNIPROTKB|F1M525 - symbol:Rad51c "Protein Rad51c" species... 128 1.8e-13 2
RGD|1563765 - symbol:Rad51c "Rad51 homolog c (S. cerevisi... 128 2.5e-13 2
GENEDB_PFALCIPARUM|MAL8P1.76 - symbol:MAL8P1.76 "meiotic ... 188 3.7e-13 1
UNIPROTKB|Q8IB05 - symbol:MAL8P1.76 "Meiotic recombinatio... 188 3.7e-13 1
UNIPROTKB|F1S262 - symbol:RAD51C "Uncharacterized protein... 123 3.8e-13 2
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 184 1.1e-12 1
UNIPROTKB|F1MW99 - symbol:RAD51C "Uncharacterized protein... 119 1.3e-12 2
UNIPROTKB|Q8R2J9 - symbol:RAD51C "DNA repair protein RAD5... 122 1.7e-12 2
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 182 2.4e-12 1
MGI|MGI:2150020 - symbol:Rad51c "RAD51 homolog C" species... 119 3.0e-12 2
UNIPROTKB|B0M1M6 - symbol:pigRAD51 "Rad51" species:9823 "... 181 3.3e-12 1
SGD|S000002411 - symbol:RAD57 "Protein that stimulates st... 173 3.4e-12 2
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 181 4.0e-12 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 181 4.0e-12 1
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 180 4.6e-12 1
UNIPROTKB|Q06609 - symbol:RAD51 "DNA repair protein RAD51... 180 4.6e-12 1
ZFIN|ZDB-GENE-040426-2286 - symbol:rad51 "RAD51 homolog (... 180 4.7e-12 1
UNIPROTKB|O15315 - symbol:RAD51B "DNA repair protein RAD5... 181 4.8e-12 1
TAIR|locus:2174577 - symbol:XRCC3 "homolog of X-ray repai... 154 5.0e-12 3
ASPGD|ASPL0000051939 - symbol:AN10145 species:162425 "Eme... 183 5.7e-12 1
UNIPROTKB|E1BE93 - symbol:RAD51B "Uncharacterized protein... 180 5.8e-12 1
UNIPROTKB|G1K2Z8 - symbol:RAD51 "Uncharacterized protein"... 179 6.0e-12 1
UNIPROTKB|P37383 - symbol:RAD51A "DNA repair protein RAD5... 179 6.2e-12 1
UNIPROTKB|C9JYJ0 - symbol:RAD51B "DNA repair protein RAD5... 181 6.3e-12 1
UNIPROTKB|E1BRQ1 - symbol:RAD51C "Uncharacterized protein... 125 6.4e-12 2
UNIPROTKB|F1NUE9 - symbol:RAD51C "Uncharacterized protein... 125 6.6e-12 2
UNIPROTKB|F1NI95 - symbol:DMC1 "Uncharacterized protein" ... 179 6.6e-12 1
UNIPROTKB|Q74ZU7 - symbol:AGR101C "AGR101Cp" species:2848... 178 7.7e-12 1
UNIPROTKB|Q6FKF0 - symbol:CAGL0L12100g "Similar to unipro... 178 7.8e-12 1
DICTYBASE|DDB_G0283637 - symbol:xrcc3 "putative DNA repai... 167 8.9e-12 2
GENEDB_PFALCIPARUM|PF11_0087 - symbol:PF11_0087 "Rad51 ho... 178 9.2e-12 1
UNIPROTKB|Q8IIS8 - symbol:Rad51 "Rad51 homolog" species:3... 178 9.2e-12 1
MGI|MGI:1099436 - symbol:Rad51b "RAD51 homolog B" species... 178 9.2e-12 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 179 1.0e-11 1
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 178 1.1e-11 1
UNIPROTKB|Q2KJ94 - symbol:RAD51 "DNA repair protein RAD51... 177 1.2e-11 1
UNIPROTKB|Q8MKI8 - symbol:RAD51 "DNA repair protein RAD51... 177 1.2e-11 1
UNIPROTKB|O77507 - symbol:RAD51 "DNA repair protein RAD51... 177 1.2e-11 1
UNIPROTKB|P70099 - symbol:RAD51 "DNA repair protein RAD51... 177 1.2e-11 1
MGI|MGI:97890 - symbol:Rad51 "RAD51 homolog" species:1009... 177 1.2e-11 1
UNIPROTKB|J3QKK3 - symbol:RAD51C "DNA repair protein RAD5... 114 1.2e-11 2
UNIPROTKB|Q9DGC3 - symbol:Dmc1 "DMC1" species:8330 "Cynop... 176 1.6e-11 1
UNIPROTKB|O43502 - symbol:RAD51C "DNA repair protein RAD5... 114 1.7e-11 2
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 175 1.9e-11 1
UNIPROTKB|F1PMI7 - symbol:RAD51C "Uncharacterized protein... 115 1.9e-11 2
SGD|S000000981 - symbol:DMC1 "Meiosis-specific protein re... 175 1.9e-11 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 175 2.0e-11 1
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 175 2.1e-11 1
UNIPROTKB|A3E3X4 - symbol:rad51 "Rad51" species:4754 "Pne... 175 2.1e-11 1
UNIPROTKB|A3E3X6 - symbol:rad51 "Rad51" species:263815 "P... 175 2.1e-11 1
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 175 2.6e-11 1
RGD|1307611 - symbol:Dmc1 "DMC1 dosage suppressor of mck1... 174 2.9e-11 1
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 173 3.8e-11 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 173 3.8e-11 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 173 3.8e-11 1
UNIPROTKB|Q50LF6 - symbol:tilDmc1 "RecA homolog Dmc1" spe... 172 5.1e-11 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 175 8.5e-11 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 175 8.5e-11 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 175 8.5e-11 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 170 9.5e-11 1
ASPGD|ASPL0000057020 - symbol:uvsC species:162425 "Emeric... 170 9.8e-11 1
UNIPROTKB|Q9GRA3 - symbol:CnDmc1 "DMC1 homologue CnDMC1" ... 169 1.1e-10 1
UNIPROTKB|F1SA21 - symbol:RAD51B "Uncharacterized protein... 164 1.3e-10 1
UNIPROTKB|E1BVI8 - symbol:RAD51B "Uncharacterized protein... 165 1.7e-10 1
RGD|1560681 - symbol:Rad51b "RAD51 homolog B (S. cerevisi... 163 2.1e-10 1
UNIPROTKB|Q50LF7 - symbol:eDmc1 "RecA homolog DMC1" speci... 167 2.1e-10 1
UNIPROTKB|Q2HJ51 - symbol:RAD51D "DNA repair protein RAD5... 165 3.4e-10 1
FB|FBgn0003482 - symbol:spn-D "spindle D" species:7227 "D... 162 3.8e-10 1
ZFIN|ZDB-GENE-060331-93 - symbol:dmc1 "DMC1 dosage suppre... 165 3.9e-10 1
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 162 9.3e-10 1
UNIPROTKB|E2R3P3 - symbol:RAD51B "Uncharacterized protein... 158 1.3e-09 1
UNIPROTKB|E1BVK2 - symbol:RAD51D "Uncharacterized protein... 160 1.4e-09 1
UNIPROTKB|O75771 - symbol:RAD51D "DNA repair protein RAD5... 160 1.4e-09 1
UNIPROTKB|H7C1R0 - symbol:RAD51C "DNA repair protein RAD5... 110 2.1e-09 2
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 157 3.9e-09 1
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 157 4.2e-09 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 157 5.3e-09 1
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 157 5.3e-09 1
MGI|MGI:1261809 - symbol:Rad51d "RAD51 homolog D" species... 151 1.8e-08 1
RGD|1306944 - symbol:Rad51d "RAD51 homolog D (S. cerevisi... 146 1.9e-08 1
UNIPROTKB|G3V399 - symbol:XRCC3 "DNA repair protein XRCC3... 132 2.1e-08 1
ZFIN|ZDB-GENE-040426-2490 - symbol:rad51d "RAD51 homolog ... 149 3.1e-08 1
WARNING: Descriptions of 18 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-050320-116 [details] [associations]
symbol:xrcc3 "X-ray repair complementing defective
repair in Chinese hamster cells 3" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 ZFIN:ZDB-GENE-050320-116
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:BX255905
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOVERGEN:HBG054179
OMA:INQVTEA IPI:IPI00494088 UniGene:Dr.75660
Ensembl:ENSDART00000010564 InParanoid:Q5TZD9 Uniprot:Q5TZD9
Length = 352
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 64/174 (36%), Positives = 95/174 (54%)
Query: 51 DSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYICTESVFPTA 106
D +++GG+ GITEL+G S GKTQ CLQ+CLS+Q Q H G +YICTE FP
Sbjct: 90 DGLMRGGLPLRGITELAGESAAGKTQFCLQLCLSVQYPQEHGGLNSGAVYICTEDSFPIK 149
Query: 107 RLAQLCELSPLAKP----------KCSDKIFITHCYEFIDLKRTLESQSGFIENK--VGM 154
RL QL P +P + SD I+I H + L+ + + + + V +
Sbjct: 150 RLRQLITQQPRLRPDLPPALIHSLRFSDNIYIEHAADLEALQVCVSQRVPVLLKRGLVRL 209
Query: 155 IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
+V+DS+A +FR+ + D+ VQR+ + + LH LS + V+C NQVT +
Sbjct: 210 LVVDSVAALFRSEFQADEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQVTDVV 263
>FB|FBgn0003480 [details] [associations]
symbol:spn-B "spindle B" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IGI] [GO:0009949 "polarity
specification of anterior/posterior axis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;TAS] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0006281 "DNA
repair" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0007126 "meiosis"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
EMBL:AE014297 GO:GO:0005524 GO:GO:0009949 GO:GO:0007294
GO:GO:0006417 GO:GO:0003677 GO:GO:0006200 GO:GO:0006302
GO:GO:0030261 GO:GO:0008298 GO:GO:0030717 GO:GO:0007131
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HSSP:O74036
GO:GO:0009951 KO:K10880 OMA:YSPETPN EMBL:AF069531 EMBL:BT044133
EMBL:FJ219434 EMBL:FJ219442 EMBL:FJ219445 EMBL:FJ219448
RefSeq:NP_476740.1 UniGene:Dm.4725 SMR:O77135 IntAct:O77135
MINT:MINT-763026 STRING:O77135 EnsemblMetazoa:FBtr0082933
GeneID:41746 KEGG:dme:Dmel_CG3325 UCSC:CG3325-RA CTD:41746
FlyBase:FBgn0003480 HOGENOM:HOG000012350 InParanoid:O77135
OrthoDB:EOG49CNQT GenomeRNAi:41746 NextBio:825371 Uniprot:O77135
Length = 341
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 76/194 (39%), Positives = 103/194 (53%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKGVLYIC 98
VS G D GG+ GITEL GA+G GKTQL LQ+ L +Q+ + KGV YIC
Sbjct: 88 VSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPRELGGLGKGVAYIC 147
Query: 99 TESVFPTARLAQL---CELS-PLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI--ENKV 152
TES FP RL Q+ CE P + IF+ + E L + ++ + ++ +
Sbjct: 148 TESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQHGI 207
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
G+I+IDS+A IFR Y + Y++RA MR LA L + K+ V+C NQV A
Sbjct: 208 GLIIIDSVAAIFR-LYND--YLERARHMRRLADALLSYADKYNCAVVCVNQV--ATRDGQ 262
Query: 213 KNIPALGLTYERAH 226
IP LGL + AH
Sbjct: 263 DEIPCLGLQW--AH 274
>UNIPROTKB|O43542 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0010033 "response to organic substance" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 MIM:114480 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOGENOM:HOG000239162 KO:K10880 CTD:7517
HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS EMBL:AF035586
EMBL:AF037222 EMBL:AF508041 EMBL:BC001036 EMBL:BC002949
EMBL:BC011725 IPI:IPI00023073 RefSeq:NP_001093588.1
RefSeq:NP_001093589.1 RefSeq:NP_005423.1 UniGene:Hs.592325
UniGene:Hs.733412 ProteinModelPortal:O43542 SMR:O43542
IntAct:O43542 STRING:O43542 PhosphoSite:O43542 PaxDb:O43542
PRIDE:O43542 DNASU:7517 Ensembl:ENST00000352127
Ensembl:ENST00000445556 Ensembl:ENST00000553264
Ensembl:ENST00000554913 Ensembl:ENST00000555055 GeneID:7517
KEGG:hsa:7517 UCSC:uc001ynx.4 GeneCards:GC14M104163 HGNC:HGNC:12830
MIM:600675 MIM:613972 neXtProt:NX_O43542 PharmGKB:PA37422
InParanoid:O43542 PhylomeDB:O43542 GenomeRNAi:7517 NextBio:29415
ArrayExpress:O43542 Bgee:O43542 CleanEx:HS_XRCC3
Genevestigator:O43542 GermOnline:ENSG00000126215 Uniprot:O43542
Length = 346
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 72/199 (36%), Positives = 99/199 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+ +YIC
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCELSP----------LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP RL QL P L K + +IFI H + L + + +
Sbjct: 142 TEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVL 201
Query: 149 ENKVGM---IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
++ GM +VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 202 LSR-GMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVT 260
Query: 206 SAMTHSDKNIPALGLTYER 224
AM LG ER
Sbjct: 261 EAMEEQGAAHGPLGFWDER 279
Score = 120 (47.3 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 90 PHKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE 149
PHK + + + P R EL L K + +IFI H + L + + +
Sbjct: 147 PHKRLQQLMAQQ--PRLRTDVPGEL--LQKLRFGSQIFIEHVADVDTLLECVNKKVPVLL 202
Query: 150 NKVGM---IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ GM +VIDS+A FR + RA ++ L L ELS + V+C NQVT
Sbjct: 203 SR-GMARLVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVTE 261
Query: 207 AM-----THS-----DKNI-PALGLTYERAHDMRDLAHYLHE 237
AM H D+ + PALG+T+ +R LA L E
Sbjct: 262 AMEEQGAAHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 303
>UNIPROTKB|Q5ZM26 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162 KO:K10880
CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AADN02003784 EMBL:AJ719558 IPI:IPI00684938
RefSeq:NP_001006489.1 UniGene:Gga.3684 STRING:Q5ZM26
Ensembl:ENSGALT00000032496 GeneID:423485 KEGG:gga:423485
InParanoid:Q5ZM26 NextBio:20825955 Uniprot:Q5ZM26
Length = 347
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 64/186 (34%), Positives = 97/186 (52%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH----KGVLYIC 98
+S G D +LKGGI GITEL+G S GKTQ+ LQ+CL +Q + G +YIC
Sbjct: 82 LSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYPYRYGGLESGAVYIC 141
Query: 99 TESVFPTARLAQL--------CELSP--LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL ++ P + K + + IF+ H + + + +
Sbjct: 142 TEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADLDTFHNCITKRLSLL 201
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ V ++VIDSIA +FR + V +A ++ LH LS + R ++C NQVT
Sbjct: 202 LTRGMVRLVVIDSIAALFRCEFGASDSVLKARYLQTFGAQLHGLSTRFRTPIMCINQVTD 261
Query: 207 AMTHSD 212
A++ S+
Sbjct: 262 AVSESE 267
>UNIPROTKB|F1S9W9 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:INQVTEA
EMBL:CU694215 Ensembl:ENSSSCT00000002829 Uniprot:F1S9W9
Length = 347
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 65/182 (35%), Positives = 97/182 (53%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ GITEL+G S GKTQL LQ+CL++Q+ + H G+ +Y+C
Sbjct: 83 LSLGCPVLDGLLRGGLPLDGITELAGRSSTGKTQLALQLCLAVQLPRQHGGLGTGAVYVC 142
Query: 99 TESVFPTARLAQLCELSPLAKP----------KCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL L +P K D+IF+ H + L + + +
Sbjct: 143 TEGAFPSRRLQQLVAQQQLLRPDVPGDVLGKIKFGDQIFVEHVADVDTLLDCVSRKVPVL 202
Query: 149 ENK--VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++ ++VIDS+A FR +A +RA ++ L L LS R V+C NQVT
Sbjct: 203 LSRGVARLLVIDSVAAPFRCEFAGADSARRARRLQALGAELRRLSCAFRSPVLCINQVTE 262
Query: 207 AM 208
A+
Sbjct: 263 AV 264
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 117 LAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYV 174
L K K D+IF+ H + L + + + ++ ++VIDS+A FR +A
Sbjct: 171 LGKIKFGDQIFVEHVADVDTLLDCVSRKVPVLLSRGVARLLVIDSVAAPFRCEFAGADSA 230
Query: 175 QRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM-THS------DKNIPALGLTYERAHD 227
+RA ++ L L LS R V+C NQVT A+ H ++ PALG+T+
Sbjct: 231 RRARRLQALGAELRRLSCAFRSPVLCINQVTEAVDAHEAAGAGGERTSPALGITWSSQLL 290
Query: 228 MR 229
MR
Sbjct: 291 MR 292
>UNIPROTKB|E2RAE7 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 KO:K10880 CTD:7517 OMA:INQVTEA
EMBL:AAEX03006057 RefSeq:XP_003435154.1 Ensembl:ENSCAFT00000029054
GeneID:100687200 KEGG:cfa:100687200 Uniprot:E2RAE7
Length = 349
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 73/200 (36%), Positives = 102/200 (51%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D +L+GG+ G+TEL+G S GKTQL LQ+CL++Q H G+ +YIC
Sbjct: 82 LSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFPPRHGGLDAGAMYIC 141
Query: 99 TESVFPTARLAQLCELS-------P---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE VFP RL QL P +++ K S++IFI H + L + + +
Sbjct: 142 TEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEHVADVDSLLECVREKVPVL 201
Query: 149 ENKVGM---IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
++ GM +VIDS+A FR + V RA ++ L L LS + V+C NQVT
Sbjct: 202 LSR-GMARLVVIDSVAAPFRCEFDGPALVPRARHLQALGAALRRLSCAFQSPVLCINQVT 260
Query: 206 SAMTHSDKNIPAL-GLTYER 224
A T P GL ER
Sbjct: 261 EA-TEEQGTAPRPHGLRDER 279
>UNIPROTKB|Q08DH8 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 EMBL:BC123742 IPI:IPI00717766 RefSeq:NP_001071585.1
UniGene:Bt.41484 ProteinModelPortal:Q08DH8 STRING:Q08DH8
PRIDE:Q08DH8 Ensembl:ENSBTAT00000013145 GeneID:768244
KEGG:bta:768244 CTD:7517 HOVERGEN:HBG054179 InParanoid:Q08DH8
OMA:INQVTEA OrthoDB:EOG47D9GS NextBio:20918540 Uniprot:Q08DH8
Length = 341
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 64/186 (34%), Positives = 94/186 (50%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q+ H G+ +Y+C
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGAGAVYVC 141
Query: 99 TESVFPTARLAQLCELS-------P---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL P ++K + +IFI H + L + + + +
Sbjct: 142 TEDAFPSRRLQQLIAQQQRLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVREKVPVL 201
Query: 149 --ENKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++VIDS+A FR + RA + L L LS R V+C NQVT
Sbjct: 202 LARGMARLVVIDSVAAPFRCEFDGAALALRAQRLLALGAELRRLSCAFRSPVLCVNQVTE 261
Query: 207 AMTHSD 212
A+ D
Sbjct: 262 AVEEQD 267
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 222 (83.2 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 50/174 (28%), Positives = 92/174 (52%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++ D +L GGI G ITE+ G CGKTQLC + ++ Q+ KG +Y
Sbjct: 97 VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE+ F RLA + + L + + D + T + + ++ +G + E++ ++
Sbjct: 157 IDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALL 216
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++DS ++R+ Y + R + + L L+ + + V+ TNQVT+++
Sbjct: 217 IVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASL 270
>MGI|MGI:1921585 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:1921585
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AK014491 IPI:IPI00110210 RefSeq:NP_083151.1 UniGene:Mm.19082
ProteinModelPortal:Q9CXE6 SMR:Q9CXE6 STRING:Q9CXE6
PhosphoSite:Q9CXE6 PRIDE:Q9CXE6 DNASU:74335
Ensembl:ENSMUST00000021715 GeneID:74335 KEGG:mmu:74335
UCSC:uc007pdz.1 InParanoid:Q9CXE6 NextBio:340475 Bgee:Q9CXE6
Genevestigator:Q9CXE6 GermOnline:ENSMUSG00000021287 Uniprot:Q9CXE6
Length = 349
Score = 220 (82.5 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 68/199 (34%), Positives = 97/199 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D L GG+ GIT L+G S GKTQL LQ+CL++Q + + G+ +YIC
Sbjct: 82 LSLGCPVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCEL-------SP---LAKPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL +P + K + S+ IFI H + L + + +
Sbjct: 142 TEDAFPSKRLWQLIAQQRRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVSKKVPIL 201
Query: 149 ENKVGM---IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
++ GM +V+DSIA FR + RA + L L LS R V+C NQVT
Sbjct: 202 LSR-GMARLVVVDSIAAPFRCEFHLQASAIRAKLLLSLGATLRRLSSTFRSPVLCINQVT 260
Query: 206 SAMTHSDKNIPALGLTYER 224
+ +LG + ER
Sbjct: 261 DMVEDQQSVSRSLGASEER 279
>TAIR|locus:2825233 [details] [associations]
symbol:RAD51D "homolog of RAD51 D" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISS;RCA;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016444
"somatic cell DNA recombination" evidence=IMP] [GO:1900426
"positive regulation of defense response to bacterium"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=RCA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 EMBL:AC007583 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 EMBL:AJ549434
EMBL:AB194811 IPI:IPI00533353 PIR:H86212 RefSeq:NP_172254.2
UniGene:At.26372 ProteinModelPortal:Q9LQQ2 SMR:Q9LQQ2 STRING:Q9LQQ2
PRIDE:Q9LQQ2 EnsemblPlants:AT1G07745.1 GeneID:837289
KEGG:ath:AT1G07745 GeneFarm:4787 TAIR:At1g07745
HOGENOM:HOG000242993 InParanoid:Q9LQQ2 KO:K10871 OMA:RIKVERI
PhylomeDB:Q9LQQ2 ProtClustDB:CLSN2699036 Genevestigator:Q9LQQ2
GermOnline:AT1G07745 GO:GO:0002831 GO:GO:0016444 Uniprot:Q9LQQ2
Length = 322
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 64/197 (32%), Positives = 98/197 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
+STG ++ DS+L+GG G +TEL G S GKTQ C+Q S V++ H G VLY+ T +
Sbjct: 89 LSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQFCMQAAAS--VAENHLGRVLYLDTGN 146
Query: 102 VFPTARLAQ-LCELSPLAK-PKCSDKIFITHCYEFI-------DLKRTLESQSGFIENKV 152
F R+AQ +C S K +I Y+ DL+ TL Q E+++
Sbjct: 147 SFSARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVNESRL 206
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
++V+DSI+ + RA M + + L +L+ +H I ++ TN A
Sbjct: 207 RLLVVDSISSLITPILGGSGSQGRAL-MVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGG 265
Query: 213 KNIPALGLTYERAHDMR 229
K PALG T++ +R
Sbjct: 266 KTKPALGETWKSIPHVR 282
>RGD|1306849 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306849
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0010033 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OrthoDB:EOG47D9GS
IPI:IPI00368372 Ensembl:ENSRNOT00000016208 UCSC:RGD:2325124
Uniprot:D4A5N4
Length = 349
Score = 217 (81.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 65/180 (36%), Positives = 89/180 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+S G D L GG+ GIT L+G S GKTQL LQ+CL++Q + + G+ +YIC
Sbjct: 82 LSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYIC 141
Query: 99 TESVFPTARLAQLCE-LSPLA---------KPKCSDKIFITHCYEFIDLKRTLESQSGFI 148
TE FP+ RL QL E L L K + + IFI H + L + + +
Sbjct: 142 TEDAFPSKRLWQLIEQLQELRTDVPGEVTQKIRFGNHIFIEHAADVDTLMECVSKRVPIL 201
Query: 149 ENKVGM---IVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT 205
++ GM +V+DSIA FR + RA + L L LS R V+C NQVT
Sbjct: 202 LSR-GMARLVVVDSIAAPFRCEFHLQASAVRAKHLHSLGAALQRLSSTFRSPVLCINQVT 260
>ZFIN|ZDB-GENE-041010-204 [details] [associations]
symbol:rad51c "rad51 homolog C (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 ZFIN:ZDB-GENE-041010-204 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5889 HOVERGEN:HBG055764 KO:K10870
OrthoDB:EOG4CRM09 EMBL:BC083214 IPI:IPI00498753
RefSeq:NP_001006101.1 UniGene:Dr.83418 ProteinModelPortal:Q5XJT2
STRING:Q5XJT2 GeneID:450081 KEGG:dre:450081 InParanoid:Q5XJT2
NextBio:20833059 ArrayExpress:Q5XJT2 Uniprot:Q5XJT2
Length = 362
Score = 151 (58.2 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 114 LSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAED 171
L L K +F+ C++++ L + F+ +V ++VIDSIA FR+ + ED
Sbjct: 179 LEELNVEKILSNLFLVRCHDYVKLLAEVYLLPDFLSEHPEVRLVVIDSIAFPFRHDF-ED 237
Query: 172 KYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD-KNIPALGLTYERAHDMRD 230
QR + LA L +L+ +HR+ V+ TNQ+T+ +++ K +PALG ++ A R
Sbjct: 238 -LSQRTRLLNGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQSKLVPALGESWGHAATQRL 296
Query: 231 LAHY 234
+ H+
Sbjct: 297 ILHW 300
Score = 120 (47.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 51 DSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTA 106
D + GG+ G TE+ GA G GKTQLC+Q+ + +Q+ G+ LYI TE F
Sbjct: 94 DDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQIPVFFGGLGGKALYIDTEGSFLVQ 153
Query: 107 RLAQLCE 113
R+A + E
Sbjct: 154 RVADMAE 160
Score = 88 (36.0 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 173 YVQRAHD-MRDLA--HYLHELSIKH---RIVVICTNQVTSAMTHSDKNIPALGLTYERAH 226
++ R HD ++ LA + L + +H R+VVI + + H +++ +R
Sbjct: 192 FLVRCHDYVKLLAEVYLLPDFLSEHPEVRLVVI--DSIAFPFRHDFEDLS------QRTR 243
Query: 227 DMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSD-KNIPALGLSWSN 272
+ LA L +++ +H + V+ TNQ+T+ +++ K +PALG SW +
Sbjct: 244 LLNGLAQQLIQLATQHRVAVVLTNQMTTRVSNGQSKLVPALGESWGH 290
>DICTYBASE|DDB_G0273611 [details] [associations]
symbol:rad51-2 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 213 (80.0 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 52/176 (29%), Positives = 89/176 (50%)
Query: 40 EIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----V 94
EI+ ++TGS++FDS+L GGI +G ITE+ G GKTQ+C +C++ Q+ G
Sbjct: 108 EIIQITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRA 167
Query: 95 LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVG 153
LYI TE F RL + E L D + Y L+ +++ + E++
Sbjct: 168 LYIDTEGTFRPERLLAIAERYNLNGEHVLDNVSYARAYNSDHQLELLVQASAMMSESRYA 227
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++++DS ++R YA + R + L L+ + + V+ TNQV +++
Sbjct: 228 LLIVDSATALYRTDYAGRGELADRQKHLARFLRTLQRLADEFGVAVVITNQVVASV 283
>DICTYBASE|DDB_G0273139 [details] [associations]
symbol:rad51-1 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 213 (80.0 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 52/176 (29%), Positives = 89/176 (50%)
Query: 40 EIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----V 94
EI+ ++TGS++FDS+L GGI +G ITE+ G GKTQ+C +C++ Q+ G
Sbjct: 108 EIIQITTGSKEFDSLLDGGIESGSITEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRA 167
Query: 95 LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFI-DLKRTLESQSGFIENKVG 153
LYI TE F RL + E L D + Y L+ +++ + E++
Sbjct: 168 LYIDTEGTFRPERLLAIAERYNLNGEHVLDNVSYARAYNSDHQLELLVQASAMMSESRYA 227
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
++++DS ++R YA + R + L L+ + + V+ TNQV +++
Sbjct: 228 LLIVDSATALYRTDYAGRGELADRQKHLARFLRTLQRLADEFGVAVVITNQVVASV 283
>POMBASE|SPAC20H4.07 [details] [associations]
symbol:rad57 "RecA family ATPase Rad57/Rhp57"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000730 "DNA recombinase assembly" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0033062 "Rhp55-Rhp57 complex" evidence=NAS]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042148 "strand invasion" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR020588
PROSITE:PS50162 PomBase:SPAC20H4.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0007131
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000730 GO:GO:0033170 GO:GO:0042148
GO:GO:0033062 EMBL:AB024744 PIR:T43507 RefSeq:NP_593627.1
ProteinModelPortal:Q9UUL2 IntAct:Q9UUL2 STRING:Q9UUL2
EnsemblFungi:SPAC20H4.07.1 GeneID:2542007 KEGG:spo:SPAC20H4.07
KO:K10958 OMA:LERRTHC OrthoDB:EOG4HTD1G NextBio:20803087
Uniprot:Q9UUL2
Length = 354
Score = 195 (73.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 56/162 (34%), Positives = 84/162 (51%)
Query: 38 MTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP----HKG 93
+T ++TG K D L GGI G +TE+ G SG GK+Q C+Q+CL +Q+ +K
Sbjct: 70 VTSKYLTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKA 129
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDK-IFITHCYE--FIDLKRTLESQSGFIE- 149
++I TES T RL +L P PK K I I + + + L LESQ I+
Sbjct: 130 AVFISTESGLETKRLFELARYLPERYPKADKKDIIIKNPGDRVYTILCPDLESQEHIIQY 189
Query: 150 --------NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
+K+G++++DS+A +R AE +Y + RDL
Sbjct: 190 QLPILFNRDKIGLVILDSVASNYR---AELRYNRSKSHFRDL 228
Score = 46 (21.3 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 257 THSDKNIPALGLSWSNLI 274
T + IP+LGL W+N I
Sbjct: 291 TDPNPKIPSLGLVWTNNI 308
Score = 43 (20.2 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 223 ERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKNIPALGL 268
+R + + LA L ++ +H V+ NQV+ + ++ A+GL
Sbjct: 233 KRGNQLGKLAMTLRTLAHQHEAAVVIANQVSDRIP---RDYDAIGL 275
>TAIR|locus:2147092 [details] [associations]
symbol:RAD51 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010332 "response to gamma radiation" evidence=IEP;RCA]
[GO:0006302 "double-strand break repair" evidence=RCA;IMP]
[GO:0006259 "DNA metabolic process" evidence=IDA;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009555
"pollen development" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IDA] [GO:0009314 "response to radiation"
evidence=NAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163
SMART:SM00278 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003684
GO:GO:0010332 EMBL:AF296834 GO:GO:0045003 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K04482 EMBL:U43652 EMBL:AJ001100 EMBL:U43528
IPI:IPI00532326 RefSeq:NP_568402.1 UniGene:At.110
ProteinModelPortal:P94102 SMR:P94102 DIP:DIP-31780N IntAct:P94102
STRING:P94102 EnsemblPlants:AT5G20850.1 GeneID:832208
KEGG:ath:AT5G20850 GeneFarm:4757 TAIR:At5g20850 InParanoid:P94102
OMA:MMAESRY PhylomeDB:P94102 ProtClustDB:PLN03186
Genevestigator:P94102 GermOnline:AT5G20850 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 Uniprot:P94102
Length = 342
Score = 198 (74.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 51/179 (28%), Positives = 86/179 (48%)
Query: 40 EIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----V 94
EI+ +++GS + D +L+GGI G ITEL G GKTQLC +C++ Q+ G
Sbjct: 101 EIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKA 160
Query: 95 LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENKVG 153
+YI E F RL Q+ + L + + Y R L E+ S IE +
Sbjct: 161 MYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFA 220
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
++++DS ++R ++ + R + L +L+ + + V+ TNQV + + S
Sbjct: 221 LLIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGS 279
>ZFIN|ZDB-GENE-040426-2750 [details] [associations]
symbol:rad51b "RAD51 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 ZFIN:ZDB-GENE-040426-2750
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869
HOGENOM:HOG000154062 HSSP:O74036 EMBL:BC052122 IPI:IPI00506696
RefSeq:NP_998577.1 UniGene:Dr.123796 ProteinModelPortal:Q7ZTX4
PRIDE:Q7ZTX4 GeneID:406721 KEGG:dre:406721 InParanoid:Q7ZTX4
NextBio:20818241 ArrayExpress:Q7ZTX4 Bgee:Q7ZTX4 Uniprot:Q7ZTX4
Length = 373
Score = 195 (73.7 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 58/184 (31%), Positives = 90/184 (48%)
Query: 40 EIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK------G 93
E+ ST D +L GG+ G +TE++G SGCGKTQLC M LS+ + P G
Sbjct: 76 ELCFSTSLPALDRLLHGGLPRGALTEVTGPSGCGKTQLC--MMLSVLATLPKSLGGLDSG 133
Query: 94 VLYICTESVFPTARLAQLCELS-P---LAKPKCSDKIFITHCYEFID----LKRTLESQS 145
V+YI TES F RL ++ + P K + + H + + LKR +
Sbjct: 134 VIYIDTESAFSAERLVEMAQSRFPEFFSVKERLLEMAARVHLFRELTCQDVLKRLERLEE 193
Query: 146 GFIENKVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTN 202
I + G++++DS+A + R +T R++ + A L LS + I V+ TN
Sbjct: 194 DIIACRAGLVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVLKYLSQEFCIPVVLTN 253
Query: 203 QVTS 206
Q+T+
Sbjct: 254 QITT 257
>UNIPROTKB|G4MNW7 [details] [associations]
symbol:MGG_06985 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
EMBL:CM001231 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10958 RefSeq:XP_003709736.1 ProteinModelPortal:G4MNW7
EnsemblFungi:MGG_06985T0 GeneID:2685158 KEGG:mgr:MGG_06985
Uniprot:G4MNW7
Length = 548
Score = 188 (71.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 58/177 (32%), Positives = 90/177 (50%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH---KGVLYICT 99
+ST + D+ L GGI G +TE++G SG GKTQ L + L++Q+ PH + +YI T
Sbjct: 137 ISTLDPELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPPHGLGRKAMYIPT 196
Query: 100 ESVFPTARLAQLCELSPL---AKPKCS-DKIFITHCYEFIDLKRTLESQSGFIE---NKV 152
E+ T R+AQ+ +PL A P+ S D I I+ + + S +E V
Sbjct: 197 EAALSTRRVAQMLAANPLLLSASPRPSLDSILSLQPLGDIEAQDHILSFQVPLEAARRNV 256
Query: 153 GMIVIDSIAGIFRNTY--AEDK---YVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
G+I++DS+A FR Y A + R+ ++ L L L+ + V+ NQV
Sbjct: 257 GLIILDSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVANQV 313
Score = 41 (19.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 255 AMTHSDKNIPALGLSWSNLI 274
+M+ + P+LGL WS I
Sbjct: 440 SMSAGNHKTPSLGLVWSTQI 459
>UNIPROTKB|F1M525 [details] [associations]
symbol:Rad51c "Protein Rad51c" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 IPI:IPI00951574 Ensembl:ENSRNOT00000065976
ArrayExpress:F1M525 Uniprot:F1M525
Length = 336
Score = 128 (50.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C+++ +L + F+ + KV +++ID IA FR+ +D ++ R + L
Sbjct: 169 IYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDL-DDLFL-RTRLLNGL 226
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
A L L+ KHR+ VI TNQ+T+ + + + +PALG ++ A +R + H+
Sbjct: 227 AQQLISLANKHRLAVILTNQMTTKIDKNQASLVPALGESWGHAATIRLIFHW 278
Score = 111 (44.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 57 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 116
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 117 VFIDTEGSFMVDRVVSL 133
Score = 81 (33.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 173 YVQRAHDMRDL---AHYLHELSIKH-RIVVICTNQVTSAMTHSDKNIPALGLTYERAHDM 228
Y R HD +L + L + H ++ ++ + + H ++ + R +
Sbjct: 170 YYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLDDL------FLRTRLL 223
Query: 229 RDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
LA L ++ KH + VI TNQ+T+ + + + +PALG SW +
Sbjct: 224 NGLAQQLISLANKHRLAVILTNQMTTKIDKNQASLVPALGESWGH 268
>RGD|1563765 [details] [associations]
symbol:Rad51c "Rad51 homolog c (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IEA;ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA;ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 CTD:5889 KO:K10870
OMA:QRDLVSF RefSeq:NP_001123249.1 UniGene:Rn.160309
Ensembl:ENSRNOT00000008846 GeneID:497976 KEGG:rno:497976
NextBio:698267 Uniprot:G3V6U0
Length = 366
Score = 128 (50.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 34/112 (30%), Positives = 63/112 (56%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C+++ +L + F+ + KV +++ID IA FR+ +D ++ R + L
Sbjct: 199 IYYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDL-DDLFL-RTRLLNGL 256
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
A L L+ KHR+ VI TNQ+T+ + + + +PALG ++ A +R + H+
Sbjct: 257 AQQLISLANKHRLAVILTNQMTTKIDKNQASLVPALGESWGHAATIRLIFHW 308
Score = 111 (44.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 147 VFIDTEGSFMVDRVVSL 163
Score = 81 (33.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 173 YVQRAHDMRDL---AHYLHELSIKH-RIVVICTNQVTSAMTHSDKNIPALGLTYERAHDM 228
Y R HD +L + L + H ++ ++ + + H ++ + R +
Sbjct: 200 YYFRCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLDDL------FLRTRLL 253
Query: 229 RDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
LA L ++ KH + VI TNQ+T+ + + + +PALG SW +
Sbjct: 254 NGLAQQLISLANKHRLAVILTNQMTTKIDKNQASLVPALGESWGH 298
>GENEDB_PFALCIPARUM|MAL8P1.76 [details] [associations]
symbol:MAL8P1.76 "meiotic recombination protein
dmc1-like protein" species:5833 "Plasmodium falciparum" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 188 (71.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS FD L GGI + ITEL G + CGKTQ+C + ++ Q+ + G V YI
Sbjct: 110 ITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVI 157
TE F ++ ++ E L D I + L + L S + E ++V+
Sbjct: 170 TEGTFRPEKVCKIAERYGLDGEAVLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVV 229
Query: 158 DSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI +FR ++ + +R + L +LS + I ++ TNQV S
Sbjct: 230 DSIISLFRVDFSGRGELSERQQKLNKTMSILSKLSEQFNIAILITNQVMS 279
>UNIPROTKB|Q8IB05 [details] [associations]
symbol:MAL8P1.76 "Meiotic recombination protein dmc1-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 188 (71.2 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 52/170 (30%), Positives = 82/170 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++TGS FD L GGI + ITEL G + CGKTQ+C + ++ Q+ + G V YI
Sbjct: 110 ITTGSTVFDQTLGGGIESMCITELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLE-SQSGFIENKVGMIVI 157
TE F ++ ++ E L D I + L + L S + E ++V+
Sbjct: 170 TEGTFRPEKVCKIAERYGLDGEAVLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVV 229
Query: 158 DSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
DSI +FR ++ + +R + L +LS + I ++ TNQV S
Sbjct: 230 DSIISLFRVDFSGRGELSERQQKLNKTMSILSKLSEQFNIAILITNQVMS 279
>UNIPROTKB|F1S262 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004504 InterPro:IPR020588 PRINTS:PR01874
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:FP102481 Ensembl:ENSSSCT00000019210 Uniprot:F1S262
Length = 321
Score = 123 (48.4 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQSFIITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVEGEA 146
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 147 VFIDTEGSFMVNRVVDL 163
Score = 113 (44.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C ++ +L + F+ +KV ++++D IA FR+ D R + L
Sbjct: 199 IYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHEL--DDLSLRTRLLNGL 256
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T T DKN +PALG ++ A +R + H+
Sbjct: 257 AQQMISLANNHRLAVILTNQMT---TKIDKNEALLVPALGESWGHAATIRLIFHW 308
Score = 72 (30.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 224 RAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN----IPALGLSWSN 272
R + LA + ++ H + VI TNQ+T T DKN +PALG SW +
Sbjct: 249 RTRLLNGLAQQMISLANNHRLAVILTNQMT---TKIDKNEALLVPALGESWGH 298
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 184 (69.8 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 52/171 (30%), Positives = 80/171 (46%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS++ D +L GG+ + ITE+ G CGKTQLC +C++ Q+ + G V YI
Sbjct: 93 LSTGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVTAQLPKEMGGSEGKVAYID 152
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGMIV 156
TE F R+ + E + C + I + + L Q G F + ++V
Sbjct: 153 TEGTFRPDRIRSIAERFQVDADACLENISYARALNS-EHQMELAEQLGLQFADGTYRLLV 211
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DSI FR Y+ + R + L L+ + + V TNQV S
Sbjct: 212 VDSIMACFRVDYSGRGELNDRQQKLNQHLSSLIRLAEDYNVAVFLTNQVQS 262
>UNIPROTKB|F1MW99 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:DAAA02048323
IPI:IPI00713775 Ensembl:ENSBTAT00000020012 Uniprot:F1MW99
Length = 382
Score = 119 (46.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 97 TQNFIITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAIDVQIPECFGGVEGEA 156
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 157 VFIDTEGSFMVDRVVDL 173
Score = 115 (45.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 35/115 (30%), Positives = 59/115 (51%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C ++ +L + S F+ +KV ++++D IA FR+ D R + L
Sbjct: 209 IYYFRCRDYTELLAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGL 266
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T T D+N +PALG ++ A +R + H+
Sbjct: 267 AQQMISLANNHRLAVILTNQMT---TKFDRNQALLVPALGESWGHAATIRLIFHW 318
Score = 72 (30.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKH 242
L+ +L E S K R+V++ + + H ++ L L R + LA + ++ H
Sbjct: 227 LSDFLSEHS-KVRLVIV--DGIAFPFRH---DLDDLSL---RTRLLNGLAQQMISLANNH 277
Query: 243 WIVVICTNQVTSAMTHSDKN----IPALGLSWSN 272
+ VI TNQ+T T D+N +PALG SW +
Sbjct: 278 RLAVILTNQMT---TKFDRNQALLVPALGESWGH 308
>UNIPROTKB|Q8R2J9 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0008094 GO:GO:0007062 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AJ413202
EMBL:AJ428572 RefSeq:NP_001231005.1 HSSP:O74036
ProteinModelPortal:Q8R2J9 GeneID:100689078 CTD:5889
HOVERGEN:HBG055764 Uniprot:Q8R2J9
Length = 366
Score = 122 (48.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C+++ +L + F+ N KV +++ID IA FR+ D R + L
Sbjct: 199 IYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDL--DDLSLRTRLLNGL 256
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T T DKN +PALG ++ A +R + H+
Sbjct: 257 AQQMISLANNHRLAVILTNQMT---TKIDKNQALLVPALGESWGHAATIRLIFHW 308
Score = 110 (43.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 147 VFIDTEGSFMVDRVVTL 163
Score = 78 (32.5 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 173 YVQRAHDMRDL---AHYLHELSIKH-RIVVICTNQVTSAMTHSDKNIPALGLTYERAHDM 228
Y R HD +L + L + H ++ ++ + + H ++ L L R +
Sbjct: 200 YYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH---DLDDLSL---RTRLL 253
Query: 229 RDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN----IPALGLSWSN 272
LA + ++ H + VI TNQ+T T DKN +PALG SW +
Sbjct: 254 NGLAQQMISLANNHRLAVILTNQMT---TKIDKNQALLVPALGESWGH 298
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 182 (69.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 54/172 (31%), Positives = 82/172 (47%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS++FD+IL GG + I+E+ G CGKTQL M + Q+ + G V YI
Sbjct: 98 ISTGSKQFDTILGGGFQSSSISEVYGEFRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYID 157
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMI 155
TE F R+AQ+ E L + I ++L TL + F + ++
Sbjct: 158 TEGTFRPDRIAQIAERYGLDAESTQENISYARALNSEHQLELLNTLSKE--FAGGQYRLL 215
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDSI FR ++ + +R + L L+ + + V+ TNQV S
Sbjct: 216 VIDSIMNCFRVDFSGRGELAERQQKLNQFLIRLSHLAEEFNVCVLMTNQVQS 267
>MGI|MGI:2150020 [details] [associations]
symbol:Rad51c "RAD51 homolog C" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048476 "Holliday junction resolvase complex" evidence=IC]
InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:2150020 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007283 EMBL:CH466556 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 GO:GO:0048476
EMBL:AL596130 GeneTree:ENSGT00550000074609 HSSP:O74036 CTD:5889
HOVERGEN:HBG055764 KO:K10870 OMA:QRDLVSF OrthoDB:EOG4CRM09
EMBL:AF324883 EMBL:AK076551 EMBL:CU406989 EMBL:CU406969
EMBL:AL669902 EMBL:BC090648 EMBL:BC141034 IPI:IPI00125672
IPI:IPI00226086 RefSeq:NP_444499.1 UniGene:Mm.37376
ProteinModelPortal:Q924H5 SMR:Q924H5 STRING:Q924H5 PRIDE:Q924H5
Ensembl:ENSMUST00000007790 Ensembl:ENSMUST00000067692 GeneID:114714
KEGG:mmu:114714 UCSC:uc007ktp.2 InParanoid:Q5SX32 NextBio:368733
Bgee:Q924H5 Genevestigator:Q924H5 Uniprot:Q924H5
Length = 366
Score = 119 (46.9 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIEN--KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C+++ +L + F+ + KV +++ID IA FR+ ED + R + L
Sbjct: 199 IYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDL-EDLSL-RTRLLNGL 256
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN----IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T T DKN +PALG ++ A +R + H+
Sbjct: 257 AQQMISLANNHRLAVILTNQMT---TKIDKNQALLVPALGESWGHAATIRLIFHW 308
Score = 111 (44.1 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 87 TQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEA 146
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 147 VFIDTEGSFMVDRVVSL 163
Score = 77 (32.2 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 173 YVQRAHDMRDL---AHYLHELSIKH-RIVVICTNQVTSAMTHSDKNIPALGLTYERAHDM 228
Y R HD +L + L + H ++ ++ + + H ++ L L R +
Sbjct: 200 YYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRH---DLEDLSL---RTRLL 253
Query: 229 RDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN----IPALGLSWSN 272
LA + ++ H + VI TNQ+T T DKN +PALG SW +
Sbjct: 254 NGLAQQMISLANNHRLAVILTNQMT---TKIDKNQALLVPALGESWGH 298
>UNIPROTKB|B0M1M6 [details] [associations]
symbol:pigRAD51 "Rad51" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051106
"positive regulation of DNA ligation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:CU633257 EMBL:EU302125 EMBL:AB355632
RefSeq:NP_001116653.1 UniGene:Ssc.22664 SMR:B0M1M6 STRING:B0M1M6
Ensembl:ENSSSCT00000005265 GeneID:100141309 KEGG:ssc:100141309
Uniprot:B0M1M6
Length = 339
Score = 181 (68.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 51/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
+++IDS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIIDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>SGD|S000002411 [details] [associations]
symbol:RAD57 "Protein that stimulates strand exchange"
species:4932 "Saccharomyces cerevisiae" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0033062 "Rhp55-Rhp57
complex" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=IPI] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0045002 "double-strand break repair via
single-strand annealing" evidence=IMP] [GO:0000707 "meiotic DNA
recombinase assembly" evidence=IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
SGD:S000002411 GO:GO:0005524 GO:GO:0003677 EMBL:BK006938
EMBL:Z48008 GO:GO:0000722 GO:GO:0008094 eggNOG:COG0468
GO:GO:0000707 InterPro:IPR013632 Pfam:PF08423 GO:GO:0030491
GO:GO:0033062 KO:K10958 OrthoDB:EOG4HTD1G EMBL:M65061 PIR:JQ1275
RefSeq:NP_010287.1 ProteinModelPortal:P25301 SMR:P25301
DIP:DIP-4774N IntAct:P25301 MINT:MINT-480305 STRING:P25301
EnsemblFungi:YDR004W GeneID:851567 KEGG:sce:YDR004W CYGD:YDR004w
HOGENOM:HOG000141828 OMA:YITTEGD NextBio:969013
Genevestigator:P25301 GermOnline:YDR004W Uniprot:P25301
Length = 460
Score = 173 (66.0 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 57/198 (28%), Positives = 92/198 (46%)
Query: 44 STGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICT 99
+T D +L GGI GITE+ G S GK+QL +Q+ LS+Q+S+P G+ +YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 100 ESVFPTARLAQLCELSPLAKPK--CSDKIFITHCYEFIDLKRTLESQSGFI-ENKVG--- 153
E PT RL + P + IF C + I+ + + Q + E G
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINVQLPILLERSKGSIK 220
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRD----LAHYLHELSIKHRIVVICTNQVTSAMT 209
+++IDSI+ R ++K + + + ++ +A L L+ + + V+ NQV
Sbjct: 221 LVIIDSISHHLR-VELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVVANQVGDKPL 279
Query: 210 HSDKNIPALGLTYERAHD 227
N P TY +D
Sbjct: 280 ---ANSPVAHRTYVTDYD 294
Score = 48 (22.0 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 260 DKNIPALGLSWSN 272
D +P LGL+WSN
Sbjct: 382 DYRVPNLGLTWSN 394
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 181 (68.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 117 ICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 176
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L C D + Y L + + E++ ++
Sbjct: 177 IDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFSLL 236
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R YA + R + L L+ + I V+ TNQV +
Sbjct: 237 IVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVA 288
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 181 (68.8 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GG+ G ITE+ G GK+QLC + ++ Q+ G LY
Sbjct: 117 ICLTTGSKQLDTLLGGGVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLY 176
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L C D + Y L + + E++ ++
Sbjct: 177 IDTEGTFRPNRLVSIAQRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFSLL 236
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI ++R YA + R + L L+ + I V+ TNQV +
Sbjct: 237 IVDSIMSLYRTDYAGRGELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVA 288
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 180 (68.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 53/174 (30%), Positives = 81/174 (46%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ +STGS++FDSIL GG + I+E+ G CGKTQL M + Q+ + G V Y
Sbjct: 97 VKISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKEMGGADGKVAY 156
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVG 153
I TE F R+AQ+ E + + I ++L TL + F +
Sbjct: 157 IDTEGTFRPERIAQIAERFSVDPDSAQENIAYARALNSEHQLELLNTLSRE--FAGGEYR 214
Query: 154 MIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDSI FR Y + R + L ++ + + V+ TNQV S
Sbjct: 215 LLIIDSIMNCFRVDYCGRGELADRQQKLNQFLMRLAHMAEEFNVCVLMTNQVQS 268
>UNIPROTKB|Q06609 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0016605 "PML body" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=TAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI]
Reactome:REACT_216 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_111183 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 MIM:114480 GO:GO:0006312
Pathway_Interaction_DB:bard1pathway GO:GO:0007131 Orphanet:145
SUPFAM:SSF47794 GO:GO:0000800 PDB:1N0W PDBsum:1N0W EMBL:AC022405
EMBL:CH471125 EMBL:AC012476 Orphanet:238722 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 GO:GO:0000730 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13804 EMBL:D14134 EMBL:AF165094
EMBL:AF165088 EMBL:AF165089 EMBL:AF165090 EMBL:AF165091
EMBL:AF165092 EMBL:AF165093 EMBL:AF233744 EMBL:AF233740
EMBL:AF233741 EMBL:AF233742 EMBL:AF236021 EMBL:AF233743
EMBL:EU362635 EMBL:AY196785 EMBL:AK131299 EMBL:AK291969
EMBL:AK313503 EMBL:CR536559 EMBL:BC001459 IPI:IPI00032201
IPI:IPI00220649 IPI:IPI00553199 IPI:IPI01010370 PIR:I58295
RefSeq:NP_001157741.1 RefSeq:NP_001157742.1 RefSeq:NP_002866.2
RefSeq:NP_597994.3 UniGene:Hs.631709 PDB:1B22 PDBsum:1B22
ProteinModelPortal:Q06609 SMR:Q06609 DIP:DIP-462N IntAct:Q06609
MINT:MINT-1374477 STRING:Q06609 PhosphoSite:Q06609 DMDM:548663
PaxDb:Q06609 PRIDE:Q06609 DNASU:5888 Ensembl:ENST00000267868
Ensembl:ENST00000382643 Ensembl:ENST00000423169
Ensembl:ENST00000532743 Ensembl:ENST00000557850 GeneID:5888
KEGG:hsa:5888 UCSC:uc001zmi.4 UCSC:uc010bbw.3 GeneCards:GC15P040987
HGNC:HGNC:9817 HPA:CAB010381 MIM:179617 MIM:614508
neXtProt:NX_Q06609 PharmGKB:PA34176 PhylomeDB:Q06609
BindingDB:Q06609 ChiTaRS:RAD51 EvolutionaryTrace:Q06609
GenomeRNAi:5888 NextBio:22896 PMAP-CutDB:Q06609 ArrayExpress:Q06609
Bgee:Q06609 CleanEx:HS_RAD51 Genevestigator:Q06609
GermOnline:ENSG00000051180 Uniprot:Q06609
Length = 339
Score = 180 (68.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>ZFIN|ZDB-GENE-040426-2286 [details] [associations]
symbol:rad51 "RAD51 homolog (RecA homolog, E.
coli) (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0051597 "response to methylmercury" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382
ZFIN:ZDB-GENE-040426-2286 GO:GO:0005524 GO:GO:0046686 GO:GO:0003684
GO:GO:0006281 GO:GO:0051597 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:BX936455 IPI:IPI00496483
RefSeq:NP_998371.2 UniGene:Dr.1514 SMR:Q5TYR1
Ensembl:ENSDART00000060706 GeneID:406487 KEGG:dre:406487
InParanoid:Q5TYR1 NextBio:20818074 Uniprot:Q5TYR1
Length = 340
Score = 180 (68.4 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 51/175 (29%), Positives = 85/175 (48%)
Query: 40 EIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----V 94
EI+ +STGS++ D +L+GGI G ITE+ G GKTQLC + ++ Q+ G
Sbjct: 99 EIIQISTGSKELDKLLQGGIETGSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKA 158
Query: 95 LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVG 153
+YI TE F RL + E L D + + + L S + E++
Sbjct: 159 MYIDTEGTFRPERLLAVAERYGLVGSDVLDNVAYARAFNTDHQTQLLYQASAMMTESRYA 218
Query: 154 MIVIDSIAGIFRNTYAE--DKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + ++ H R L L L+ + + V+ TNQV +
Sbjct: 219 LLIVDSATALYRTDYSGRGELSARQGHLGRFLRMLLR-LADEFGVAVVITNQVVA 272
>UNIPROTKB|O15315 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
GO:GO:0005524 GO:GO:0005654 EMBL:CH471061 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007131 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 MIM:150699 EMBL:U92074 EMBL:U84138 EMBL:Y15571
EMBL:BX161515 EMBL:BX248061 EMBL:BX248766 EMBL:DQ160197
EMBL:AC004518 EMBL:CR536560 EMBL:BC030219 EMBL:AY138857
EMBL:AY138858 EMBL:AY138859 IPI:IPI00006105 IPI:IPI00220523
IPI:IPI00386489 IPI:IPI00386490 IPI:IPI00395987 RefSeq:NP_002868.1
RefSeq:NP_598193.2 RefSeq:NP_598194.1 UniGene:Hs.172587
ProteinModelPortal:O15315 SMR:O15315 IntAct:O15315 MINT:MINT-224850
STRING:O15315 PhosphoSite:O15315 PRIDE:O15315 DNASU:5890
Ensembl:ENST00000390683 Ensembl:ENST00000471583
Ensembl:ENST00000487270 Ensembl:ENST00000488612 GeneID:5890
KEGG:hsa:5890 UCSC:uc001xkd.3 UCSC:uc001xke.3 UCSC:uc001xkf.2
UCSC:uc001xkg.2 UCSC:uc010aqr.3 CTD:5890 GeneCards:GC14P068287
H-InvDB:HIX0022466 HGNC:HGNC:9822 HPA:CAB016191 MIM:602948
neXtProt:NX_O15315 PharmGKB:PA34178 HOVERGEN:HBG061476
InParanoid:O15315 KO:K10869 OMA:CIMMSVL PhylomeDB:O15315
ChiTaRS:RAD51B GenomeRNAi:5890 NextBio:22908 ArrayExpress:O15315
Bgee:O15315 Genevestigator:O15315 Uniprot:O15315
Length = 384
Score = 181 (68.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFI---DLKRTLES-Q 144
V+YI TES F RL ++ E +K+ +T H Y + ++ + +ES +
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
I + ++++DS+A + R + + +R + A L L+ + I VI T
Sbjct: 197 EEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILT 256
Query: 202 NQVTSAMT 209
NQ+T+ ++
Sbjct: 257 NQITTHLS 264
>TAIR|locus:2174577 [details] [associations]
symbol:XRCC3 "homolog of X-ray repair cross complementing
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=RCA;IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IDA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0045003 EMBL:AB011482
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AB062455 EMBL:AB073492
EMBL:AJ438908 EMBL:AJ438909 EMBL:AY032998 IPI:IPI00533166
RefSeq:NP_200554.1 RefSeq:NP_851202.1 UniGene:At.26227
UniGene:At.67214 ProteinModelPortal:Q9FKM5 SMR:Q9FKM5 STRING:Q9FKM5
EnsemblPlants:AT5G57450.1 EnsemblPlants:AT5G57450.2 GeneID:835850
KEGG:ath:AT5G57450 GeneFarm:4801 TAIR:At5g57450
HOGENOM:HOG000239162 InParanoid:Q9FKM5 KO:K10880 OMA:YSPETPN
PhylomeDB:Q9FKM5 ProtClustDB:CLSN2687414 Genevestigator:Q9FKM5
GermOnline:AT5G57450 Uniprot:Q9FKM5
Length = 304
Score = 154 (59.3 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 41/120 (34%), Positives = 58/120 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
++TG E D L+GGI +TE+ SGCGKTQLCLQ+ L Q+ H G+ LY+
Sbjct: 21 LTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYLH 80
Query: 99 TESVFPTARLAQLCELSPLAKPKC--------SDKIFITHCYEFIDLKRTLESQSGFIEN 150
+E FP RL QL + P D +F+ + + L + GF+ N
Sbjct: 81 SEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLFDIMPRIDGFVGN 140
Score = 102 (41.0 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 39/156 (25%), Positives = 69/156 (44%)
Query: 72 CGKTQLCLQMCLSLQVSQPHKGVLYICTESVFPTARLAQLCELSPLAKPKC--------S 123
C + LC Q+ +S + LY+ +E FP RL QL + P
Sbjct: 56 CLQLSLCTQLPISH--GGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPC 113
Query: 124 DKIFITHCYEFIDLKRTLESQSGFIENK-----VGMIVIDSIAGIFRNTY--AEDKYVQR 176
D +F+ + + L + GF+ N + +IV+DS+A +FR+ + +R
Sbjct: 114 DHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKR 173
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSD 212
+ ++ L +L+ K + ++ TNQVT + SD
Sbjct: 174 SSLFFKISGKLKQLASKFDLAIVITNQVTDLVETSD 209
Score = 46 (21.3 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 6/12 (50%), Positives = 11/12 (91%)
Query: 263 IPALGLSWSNLI 274
+P+LGL+W+N +
Sbjct: 230 VPSLGLAWANCV 241
Score = 45 (20.9 bits), Expect = 5.0e-12, Sum P(3) = 5.0e-12
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 235 LHEISIKHWIVVICTNQVTSAMTHSD 260
L +++ K + ++ TNQVT + SD
Sbjct: 184 LKQLASKFDLAIVITNQVTDLVETSD 209
>ASPGD|ASPL0000051939 [details] [associations]
symbol:AN10145 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0033062 "Rhp55-Rhp57 complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0030491 "heteroduplex formation" evidence=IEA] [GO:0000707
"meiotic DNA recombinase assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 ProteinModelPortal:C8VTV7
EnsemblFungi:CADANIAT00001591 OMA:ILSINAM Uniprot:C8VTV7
Length = 554
Score = 183 (69.5 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 33 KNPIDMTEI-VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPH 91
+ +D+++ +ST D++L GGI G +TE++G SG GKTQ L + L++Q+ P
Sbjct: 94 RTKLDLSQWRTISTLDAALDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQ 153
Query: 92 ---KGVLYICTESVFPTARLAQLCE----LSPLAKPKCSD--KIFITHCYEFIDLKRTLE 142
+ +YI TE+ T RL+QL E LS L++ + +I + + L
Sbjct: 154 GAGRSAIYISTEAPLATNRLSQLIECHPYLSTLSREQAPSLGRILSINAMDLESQDHILN 213
Query: 143 SQSGFIENK--VGMIVIDSIAGIFRNTYAEDKYV---QRAHDMRDLAHYLHELSIKHRIV 197
Q + VG++VIDSI +R + R+ ++ L L L+ +
Sbjct: 214 YQLPVAIKRYNVGLVVIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAASEDVA 273
Query: 198 VICTNQVTSAMTHSDKNIPALGLTYER 224
++ NQV+ D +P +T +R
Sbjct: 274 IVVANQVSDRF-EGDAPLPFSRVTGDR 299
>UNIPROTKB|E1BE93 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 KO:K10869 OMA:CIMMSVL
GeneTree:ENSGT00550000074609 EMBL:DAAA02029475 EMBL:DAAA02029476
EMBL:DAAA02029477 EMBL:DAAA02029478 IPI:IPI00729339
RefSeq:NP_001180066.1 UniGene:Bt.25511 Ensembl:ENSBTAT00000025252
GeneID:617007 KEGG:bta:617007 NextBio:20900440 Uniprot:E1BE93
Length = 364
Score = 180 (68.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 54/182 (29%), Positives = 89/182 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 97 LSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYID 156
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFI---DLKRTLES-QSGFIEN 150
TES F RL ++ E +K+ +T H Y + ++ + +ES + I
Sbjct: 157 TESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYRELSCDEVLQRIESLEEEIISK 216
Query: 151 KVGMIVIDSIAGIFR---NTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V +++IDS+A + R +T + +R + A L L+ + I VI TNQ+T+
Sbjct: 217 GVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLKYLAEEFSIPVILTNQITTH 276
Query: 208 MT 209
++
Sbjct: 277 LS 278
>UNIPROTKB|G1K2Z8 [details] [associations]
symbol:RAD51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006268
"DNA unwinding involved in replication" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:AADN02040043
ProteinModelPortal:G1K2Z8 Ensembl:ENSGALT00000007192 Uniprot:G1K2Z8
Length = 337
Score = 179 (68.1 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 52/177 (29%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITEL G GKTQLC + ++ Q+ G
Sbjct: 95 SEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGK 154
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
+YI TE F RL + E L+ D + + + L S + E++
Sbjct: 155 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRY 214
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 215 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 269
>UNIPROTKB|P37383 [details] [associations]
symbol:RAD51A "DNA repair protein RAD51 homolog 1"
species:9031 "Gallus gallus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0006268 "DNA unwinding involved in
replication" evidence=ISS] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0007126
GO:GO:0048471 GO:GO:0005654 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0000800 Reactome:REACT_115612
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888 EMBL:L09655
EMBL:S59426 IPI:IPI00593131 PIR:S35642 RefSeq:NP_990504.1
UniGene:Gga.2303 ProteinModelPortal:P37383 SMR:P37383 STRING:P37383
Ensembl:ENSGALT00000032744 GeneID:396086 KEGG:gga:396086
InParanoid:P37383 NextBio:20816144 Uniprot:P37383
Length = 339
Score = 179 (68.1 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 52/177 (29%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITEL G GKTQLC + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKV 152
+YI TE F RL + E L+ D + + + L S + E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>UNIPROTKB|C9JYJ0 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
HGNC:HGNC:9822 ChiTaRS:RAD51B HOGENOM:HOG000154062 EMBL:AL121595
EMBL:AL121820 EMBL:AL122013 EMBL:AL132986 EMBL:AL133313
EMBL:AL133370 EMBL:AL136294 EMBL:AL157915 EMBL:AL589168
IPI:IPI00945688 ProteinModelPortal:C9JYJ0 SMR:C9JYJ0 STRING:C9JYJ0
Ensembl:ENST00000487861 ArrayExpress:C9JYJ0 Bgee:C9JYJ0
Uniprot:C9JYJ0
Length = 425
Score = 181 (68.8 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG--- 93
D + +ST D L GG+ G +TE++G GCGKTQ C+ M + + G
Sbjct: 77 DFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEG 136
Query: 94 -VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFI---DLKRTLES-Q 144
V+YI TES F RL ++ E +K+ +T H Y + ++ + +ES +
Sbjct: 137 AVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLE 196
Query: 145 SGFIENKVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICT 201
I + ++++DS+A + R + + +R + A L L+ + I VI T
Sbjct: 197 EEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILT 256
Query: 202 NQVTSAMT 209
NQ+T+ ++
Sbjct: 257 NQITTHLS 264
>UNIPROTKB|E1BRQ1 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 EMBL:AADN02025794 IPI:IPI00602048
ProteinModelPortal:E1BRQ1 Ensembl:ENSGALT00000008107 Uniprot:E1BRQ1
Length = 369
Score = 125 (49.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV-- 94
+ T+ + T D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 85 EQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAG 144
Query: 95 --LYICTESVFPTARLAQL 111
++I TE F R A +
Sbjct: 145 EAVFIDTEGSFMVDRAADI 163
Score = 101 (40.6 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIEN----KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMR 181
I+ C ++I+L + F+ +V ++VID IA FR+ + ED + R +
Sbjct: 199 IYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDF-EDLSL-RTRLLN 256
Query: 182 DLAHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
LA L ++ H+ V+ TNQ+T+ + +PALG ++ A +R + H+
Sbjct: 257 GLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSMLVPALGESWGHAATVRLIFHW 310
Score = 68 (29.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 173 YVQRAHDMRDLAHYLHELS-IKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDL 231
Y++ + L +L E S I+ R+VVI + + H ++ L L R + L
Sbjct: 207 YIELLAQVYLLPDFLSEHSKIEVRLVVI--DGIAFPFRHDFED---LSL---RTRLLNGL 258
Query: 232 AHYLHEISIKHWIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
A L I+ H V+ TNQ+T+ + +PALG SW +
Sbjct: 259 AQQLIIIANDHKSAVVLTNQMTTRFGQNQSMLVPALGESWGH 300
>UNIPROTKB|F1NUE9 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007066 "female meiosis sister chromatid
cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007131 GO:GO:0007141 GO:GO:0008821
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0007066 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:AADN02025794 IPI:IPI00820436
Ensembl:ENSGALT00000039328 Uniprot:F1NUE9
Length = 373
Score = 125 (49.1 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 37 DMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV-- 94
+ T+ + T D+IL GG+ ITE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 90 EQTQGFIITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAG 149
Query: 95 --LYICTESVFPTARLAQL 111
++I TE F R A +
Sbjct: 150 EAVFIDTEGSFMVDRAADI 168
Score = 101 (40.6 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 32/114 (28%), Positives = 58/114 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIEN----KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMR 181
I+ C ++I+L + F+ +V ++VID IA FR+ + ED + R +
Sbjct: 204 IYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDF-EDLSL-RTRLLN 261
Query: 182 DLAHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
LA L ++ H+ V+ TNQ+T+ + +PALG ++ A +R + H+
Sbjct: 262 GLAQQLIIIANDHKSAVVLTNQMTTRFGQNQSMLVPALGESWGHAATVRLIFHW 315
Score = 68 (29.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/102 (29%), Positives = 48/102 (47%)
Query: 173 YVQRAHDMRDLAHYLHELS-IKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDL 231
Y++ + L +L E S I+ R+VVI + + H ++ L L R + L
Sbjct: 212 YIELLAQVYLLPDFLSEHSKIEVRLVVI--DGIAFPFRHDFED---LSL---RTRLLNGL 263
Query: 232 AHYLHEISIKHWIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
A L I+ H V+ TNQ+T+ + +PALG SW +
Sbjct: 264 AQQLIIIANDHKSAVVLTNQMTTRFGQNQSMLVPALGESWGH 305
>UNIPROTKB|F1NI95 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0000794 GO:GO:0000781 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:AADN02006146 IPI:IPI00578251 Ensembl:ENSGALT00000019979
Uniprot:F1NI95
Length = 346
Score = 179 (68.1 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 47/173 (27%), Positives = 85/173 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-----VLYI 97
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ P KG +++I
Sbjct: 107 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGP-KGYTGGKIIFI 165
Query: 98 CTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---M 154
TE+ F RL + + + D + Y L+ + + G +
Sbjct: 166 DTENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKL 225
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 226 LIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 278
>UNIPROTKB|Q74ZU7 [details] [associations]
symbol:AGR101C "AGR101Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0006281 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:AE016820 GenomeReviews:AE016820_GR
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 GO:GO:0000709 RefSeq:NP_986767.1 HSSP:Q06609
ProteinModelPortal:Q74ZU7 STRING:Q74ZU7 EnsemblFungi:AAS54591
GeneID:4623069 KEGG:ago:AGOS_AGR101C PhylomeDB:Q74ZU7
Uniprot:Q74ZU7
Length = 333
Score = 178 (67.7 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 61/214 (28%), Positives = 97/214 (45%)
Query: 7 MLKL-GFQEWEVNXXXXXXXXXAFQVGKNP----IDMTEIV--VSTGSEKFDSILKGGIH 59
+LK+ GF E +V QVG P +D+ + V +STGS++ DSIL GG+
Sbjct: 53 LLKIKGFSEVKVEKVKEAAGKI-IQVGFIPATVQLDIRKRVFAISTGSKQLDSILGGGVM 111
Query: 60 AGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELS 115
ITE+ G CGKTQ+ +C++ Q+ + G V YI TE F R+ Q+
Sbjct: 112 TMSITEVFGEFRCGKTQMSHTLCVTAQLPREMGGGEGKVAYIDTEGTFRPERIKQIAARY 171
Query: 116 PLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGMIVIDSIAGIFRNTYA-EDK 172
L C + + + + L Q G ++++DSI FR Y +
Sbjct: 172 DLDPDACLENVSYARALNS-EHQMELVEQLGQELASGDYRLLIVDSIMANFRVDYCGRGE 230
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + L+ ++ ++ + V TNQV S
Sbjct: 231 LNERQQKLNQHLSRLNRVAEEYNVAVFMTNQVQS 264
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 178 (67.7 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 53/173 (30%), Positives = 80/173 (46%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +STGS++ DS+L GGI ITE+ G CGKTQ+ +C++ Q+ + G V +
Sbjct: 94 ISISTGSKQLDSVLGGGIMTMSITEVFGEFRCGKTQMSHTLCVTAQLPKSMGGGEGKVAF 153
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F R+ Q+ E L C + I + + L Q G +
Sbjct: 154 IDTEGTFRPERIKQIAERYDLDPDSCLENITYARALNS-EHQMELVEQLGEELSSGSYTL 212
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
I++DSI FR Y + +R + L+ L+ + + V TNQV S
Sbjct: 213 IIVDSIMANFRVDYCGRGELNERQQKLNQHLFKLNRLAEEFNLAVFMTNQVQS 265
>DICTYBASE|DDB_G0283637 [details] [associations]
symbol:xrcc3 "putative DNA repair protein XRCC3"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0283637 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0003677
GO:GO:0006310 GO:GO:0006302 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 RefSeq:XP_638929.1
ProteinModelPortal:Q54QU4 EnsemblProtists:DDB0232275 GeneID:8624168
KEGG:ddi:DDB_G0283637 InParanoid:Q54QU4 Uniprot:Q54QU4
Length = 564
Score = 167 (63.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 68/234 (29%), Positives = 111/234 (47%)
Query: 36 IDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK--G 93
+ ++ I +STG + D L GGI GITE++G SG GKTQLC+Q LSLQV P + G
Sbjct: 160 LQISSIKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQ--LSLQVQLPFEMGG 217
Query: 94 V----LYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIE 149
+ LYI TE FPT RL Q+ + S K + + + Q
Sbjct: 218 LNGACLYITTEPPFPTKRLNQMYTVK-------SGKNTNNNTNNNNNNNNGQQQQQQQYY 270
Query: 150 NKVGMIVIDSIAGIF-RNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM 208
+K+ + + IF ++T D + + + YL + +I R+++I + + + +
Sbjct: 271 SKLSNSGVSPLDNIFIQSTTTIDSLMDLL--INQITGYLEKKTI--RLLII--DSIAALL 324
Query: 209 THSDKNIPALGLTYERAHDMRDLAHYLHEISIKHWIVVICTNQVTSAMTHSDKN 262
H N + + E+ + LA+ L I+ ++ I ++ NQVT S N
Sbjct: 325 RHEYGNEKSEII--EKTKLLWSLANRLKLINEQYGITIVVVNQVTDFFIDSFPN 376
Score = 55 (24.4 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 10/12 (83%), Positives = 11/12 (91%)
Query: 263 IPALGLSWSNLI 274
IPALGLSW+N I
Sbjct: 499 IPALGLSWANFI 510
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 178 (67.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS++ D++LKGGI GGITEL G GK+QLC + ++ Q+ G L+
Sbjct: 110 IKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLW 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMI 155
I TE F R+ + + L C + I Y L S + + + ++
Sbjct: 170 IDTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALL 229
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y + R + L ++ + + VI TNQV +
Sbjct: 230 IVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVA 281
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 178 (67.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I +TGS++ D++LKGGI GGITEL G GK+QLC + ++ Q+ G L+
Sbjct: 110 IKFTTGSKQLDALLKGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLW 169
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIEN-KVGMI 155
I TE F R+ + + L C + I Y L S + + + ++
Sbjct: 170 IDTEGTFRPERIVAIAKRYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALL 229
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DS ++R+ Y + R + L ++ + + VI TNQV +
Sbjct: 230 IVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVA 281
>MGI|MGI:1099436 [details] [associations]
symbol:Rad51b "RAD51 homolog B" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1099436 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869 OMA:CIMMSVL
EMBL:U92068 EMBL:AK015771 EMBL:AK032913 IPI:IPI00331068
IPI:IPI00399712 RefSeq:NP_001239491.1 RefSeq:NP_033040.2
UniGene:Mm.341756 ProteinModelPortal:O35719 SMR:O35719
MINT:MINT-205633 STRING:O35719 PhosphoSite:O35719 PRIDE:O35719
Ensembl:ENSMUST00000079533 GeneID:19363 KEGG:mmu:19363
UCSC:uc007oai.1 UCSC:uc007oaj.1 GeneTree:ENSGT00550000074609
HOGENOM:HOG000154062 InParanoid:O35719 OrthoDB:EOG4G4GQP
NextBio:296429 Bgee:O35719 CleanEx:MM_RAD51L1 Genevestigator:O35719
Uniprot:O35719
Length = 350
Score = 178 (67.7 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 61/201 (30%), Positives = 92/201 (45%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 83 LSTTLCALDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVLATLPTSLGGLEGAVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----H-CYEFI--DLKRTLES-QSGFIEN 150
TES F RL ++ E +K+ +T H C E L + LES + I
Sbjct: 143 TESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELTCEGLLQRLESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFRNTY---AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
V ++++DSIA + R + + +R + A L L+ + I VI TNQ+T
Sbjct: 203 GVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKYLAGEFSIPVILTNQIT-- 260
Query: 208 MTHSDKNIPALGLTYERAHDM 228
TH +P+ A D+
Sbjct: 261 -THLSGALPSQADLVSPADDL 280
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 179 (68.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS+ D++L GG+ G ITEL G GK+QLC + ++ Q+ G LY
Sbjct: 158 ICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLY 217
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + + Y R L++ + + E++ +I
Sbjct: 218 IDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLI 277
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS+ ++R ++ + R + L L+ + + V+ TNQV +
Sbjct: 278 VVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVA 329
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 178 (67.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/172 (27%), Positives = 82/172 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L+GG+ G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 126 ITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 185
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + E L + D + Y L+ + + E++ ++
Sbjct: 186 IDTEGTFRPVRLLAVAERYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMAESRFSLL 245
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L L+ + I V+ TNQV +
Sbjct: 246 VVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVA 297
>UNIPROTKB|Q2KJ94 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0016605 GO:GO:0051260
GO:GO:0003690 GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:BC105458
IPI:IPI00686332 RefSeq:NP_001039644.1 UniGene:Bt.36197 HSSP:O73948
ProteinModelPortal:Q2KJ94 SMR:Q2KJ94 STRING:Q2KJ94 PRIDE:Q2KJ94
Ensembl:ENSBTAT00000003788 GeneID:514749 KEGG:bta:514749 CTD:5888
InParanoid:Q2KJ94 OrthoDB:EOG47H5QB NextBio:20871491 Uniprot:Q2KJ94
Length = 339
Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>UNIPROTKB|Q8MKI8 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006268 "DNA
unwinding involved in replication" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0007126 GO:GO:0048471 GO:GO:0005759
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AB043896 RefSeq:NP_001003043.1
UniGene:Cfa.85 ProteinModelPortal:Q8MKI8 SMR:Q8MKI8 STRING:Q8MKI8
Ensembl:ENSCAFT00000014658 GeneID:403568 KEGG:cfa:403568
InParanoid:Q8MKI8 NextBio:20817076 Uniprot:Q8MKI8
Length = 339
Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>UNIPROTKB|O77507 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9986 "Oryctolagus cuniculus" [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0005759 GO:GO:0003684
GO:GO:0006281 GO:GO:0006310 GO:GO:0003690 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0006268
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AF017729 RefSeq:NP_001075493.1
UniGene:Ocu.2212 ProteinModelPortal:O77507 SMR:O77507 STRING:O77507
GeneID:100008661 Uniprot:O77507
Length = 339
Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVTVVITNQVVA 271
>UNIPROTKB|P70099 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:10029 "Cricetulus griseus" [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0006268 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:Y08202 RefSeq:NP_001233686.1
ProteinModelPortal:P70099 SMR:P70099 GeneID:100689324
Uniprot:P70099
Length = 339
Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>MGI|MGI:97890 [details] [associations]
symbol:Rad51 "RAD51 homolog" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO;IDA;IMP] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=TAS]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=TAS] [GO:0007126 "meiosis" evidence=IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016605 "PML
body" evidence=ISO] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:97890 GO:GO:0005524 GO:GO:0048471
GO:GO:0005654 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_120463 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 GO:GO:0007131 Reactome:REACT_27235 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13473 EMBL:D13803 EMBL:AK011242
EMBL:AK076468 EMBL:AK151157 EMBL:AK151177 EMBL:BC027384
IPI:IPI00118524 PIR:A48221 RefSeq:NP_035364.1 UniGene:Mm.330492
ProteinModelPortal:Q08297 SMR:Q08297 IntAct:Q08297 MINT:MINT-205669
STRING:Q08297 PhosphoSite:Q08297 PaxDb:Q08297 PRIDE:Q08297
Ensembl:ENSMUST00000028795 GeneID:19361 KEGG:mmu:19361
InParanoid:Q08297 NextBio:296421 Bgee:Q08297 CleanEx:MM_RAD51
Genevestigator:Q08297 GermOnline:ENSMUSG00000027323 Uniprot:Q08297
Length = 339
Score = 177 (67.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
+YI TE F RL + E L+ D + + + L S +E++
Sbjct: 157 AMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRY 216
Query: 153 GMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
++++DS ++R Y+ + A M LA +L L+ + + V+ TNQV +
Sbjct: 217 ALLIVDSATALYRTDYSGRGELS-ARQMH-LARFLRMLLRLADEFGVAVVITNQVVA 271
>UNIPROTKB|J3QKK3 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AC025521 EMBL:AC011195
HGNC:HGNC:9820 ProteinModelPortal:J3QKK3 Ensembl:ENST00000583539
Uniprot:J3QKK3
Length = 346
Score = 114 (45.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 96 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 155
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 156 VFIDTEGSFMVDRVVDL 172
Score = 110 (43.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C ++ +L + F+ +KV ++++D IA FR+ D R + L
Sbjct: 208 IYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGL 265
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T+ + + +PALG ++ A +R + H+
Sbjct: 266 AQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIFHW 317
Score = 70 (29.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKH 242
L +L E S K R+V++ + + H ++ L L R + LA + ++ H
Sbjct: 226 LPDFLSEHS-KVRLVIV--DGIAFPFRH---DLDDLSL---RTRLLNGLAQQMISLANNH 276
Query: 243 WIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
+ VI TNQ+T+ + + +PALG SW +
Sbjct: 277 RLAVILTNQMTTKIDRNQALLVPALGESWGH 307
>UNIPROTKB|Q9DGC3 [details] [associations]
symbol:Dmc1 "DMC1" species:8330 "Cynops pyrrhogaster"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 HSSP:Q06609 EMBL:AB041944
ProteinModelPortal:Q9DGC3 SMR:Q9DGC3 Uniprot:Q9DGC3
Length = 342
Score = 176 (67.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ + + G V++I
Sbjct: 103 ITTGSQEFDKLLGGGIESMAITETFGEFRTGKTQLSHTLCVTAQLPGTDGYTGGKVIFID 162
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 163 TENTFRPDRLRDIADRFSVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
VIDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 223 VIDSIMALFRVDFSGRGELAERQQKLAQMLARLQKISEEYNVAVFVTNQMTA 274
>UNIPROTKB|O43502 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0048471 GO:GO:0005654 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007283 GO:GO:0006310
EMBL:CH471109 GO:GO:0007131 Orphanet:145 Orphanet:84 GO:GO:0007141
GO:GO:0008821 GO:GO:0008094 GO:GO:0007062 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 EMBL:AC025521 CTD:5889
HOVERGEN:HBG055764 KO:K10870 EMBL:AF029669 EMBL:AF029670
EMBL:AY623112 EMBL:AC011195 EMBL:BC107753 IPI:IPI00012829
IPI:IPI00040453 RefSeq:NP_002867.1 RefSeq:NP_478123.1
UniGene:Hs.412587 ProteinModelPortal:O43502 SMR:O43502
IntAct:O43502 MINT:MINT-204767 STRING:O43502 PhosphoSite:O43502
PRIDE:O43502 DNASU:5889 Ensembl:ENST00000337432
Ensembl:ENST00000421782 GeneID:5889 KEGG:hsa:5889 UCSC:uc002iwu.3
GeneCards:GC17P056769 HGNC:HGNC:9820 MIM:602774 MIM:613390
MIM:613399 neXtProt:NX_O43502 PharmGKB:PA34177 InParanoid:O43502
OMA:QRDLVSF OrthoDB:EOG4CRM09 PhylomeDB:O43502 GenomeRNAi:5889
NextBio:22902 ArrayExpress:O43502 Bgee:O43502 CleanEx:HS_RAD51C
Genevestigator:O43502 GermOnline:ENSG00000108384 Uniprot:O43502
Length = 376
Score = 114 (45.2 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 96 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 155
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 156 VFIDTEGSFMVDRVVDL 172
Score = 110 (43.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C ++ +L + F+ +KV ++++D IA FR+ D R + L
Sbjct: 208 IYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGL 265
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T+ + + +PALG ++ A +R + H+
Sbjct: 266 AQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIFHW 317
Score = 70 (29.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKH 242
L +L E S K R+V++ + + H ++ L L R + LA + ++ H
Sbjct: 226 LPDFLSEHS-KVRLVIV--DGIAFPFRH---DLDDLSL---RTRLLNGLAQQMISLANNH 276
Query: 243 WIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
+ VI TNQ+T+ + + +PALG SW +
Sbjct: 277 RLAVILTNQMTTKIDRNQALLVPALGESWGH 307
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGSE + IL GGI + ITE+ G CGKTQ+ +C++ Q+ + G V +I
Sbjct: 95 ISTGSEALNGILGGGIQSMSITEVFGEFRCGKTQMSHTLCVTAQLPRDMGGAEGKVAFID 154
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCY------EFIDLKRTLESQSGFIENKV 152
TE F R+ + E + + + I ++ Y E+I T+ ++ G +
Sbjct: 155 TEGTFRPDRIKAIAERFGVDADQAMENIIVSRAYNSEQQMEYITKLGTIFAEDG----QY 210
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQV 204
++++DSI +FR Y+ + +R + + L+ +S + + V TNQV
Sbjct: 211 RLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNHISEEFNVAVFVTNQV 263
>UNIPROTKB|F1PMI7 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:AAEX03006577
EMBL:AAEX03006578 EMBL:AAEX03006579 Ensembl:ENSCAFT00000027833
Uniprot:F1PMI7
Length = 368
Score = 115 (45.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D+IL GGI TE+ G G GKTQLC+Q+ + +Q+ + GV
Sbjct: 89 TQSFIITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVDVQIPECFGGVEGEA 148
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 149 VFIDTEGSFMVDRVVDL 165
Score = 108 (43.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 30/112 (26%), Positives = 57/112 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C ++ +L + F+ +KV ++++D IA FR+ D R + L
Sbjct: 201 IYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGL 258
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ V+ TNQ+T+ + + +PALG ++ A +R + H+
Sbjct: 259 AQQMISLANNHRLAVLLTNQMTTKIDRNQALLVPALGESWGHAATIRLIFHW 310
Score = 68 (29.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKH 242
L +L E S K R+V++ + + H ++ L L R + LA + ++ H
Sbjct: 219 LPDFLSEHS-KVRLVIV--DGIAFPFRH---DLDDLSL---RTRLLNGLAQQMISLANNH 269
Query: 243 WIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
+ V+ TNQ+T+ + + +PALG SW +
Sbjct: 270 RLAVLLTNQMTTKIDRNQALLVPALGESWGH 300
>SGD|S000000981 [details] [associations]
symbol:DMC1 "Meiosis-specific protein required for repair of
double-strand breaks" species:4932 "Saccharomyces cerevisiae"
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0007126
"meiosis" evidence=IEA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 SGD:S000000981 GO:GO:0005524
GO:GO:0016887 GO:GO:0030435 EMBL:BK006939 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:U18922 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709 EMBL:M87549
EMBL:D10865 PIR:A38214 RefSeq:NP_011106.1 ProteinModelPortal:P25453
SMR:P25453 DIP:DIP-110N IntAct:P25453 MINT:MINT-387175
STRING:P25453 PeptideAtlas:P25453 EnsemblFungi:YER179W
GeneID:856926 KEGG:sce:YER179W CYGD:YER179w NextBio:983398
Genevestigator:P25453 GermOnline:YER179W Uniprot:P25453
Length = 334
Score = 175 (66.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/190 (31%), Positives = 87/190 (45%)
Query: 30 QVGKNP----IDMTEIV--VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCL 83
QVG P +D+ + V +STGS++ DSIL GGI ITE+ G CGKTQ+ +C+
Sbjct: 77 QVGFIPATVQLDIRQRVYSLSTGSKQLDSILGGGIMTMSITEVFGEFRCGKTQMSHTLCV 136
Query: 84 SLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKR 139
+ Q+ + G V YI TE F R+ Q+ E L C + + +
Sbjct: 137 TTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYARALNS-EHQM 195
Query: 140 TLESQSG--FIENKVGMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRI 196
L Q G +IV+DSI FR Y + +R + L+ L+ + +
Sbjct: 196 ELVEQLGEELSSGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNV 255
Query: 197 VVICTNQVTS 206
V TNQV S
Sbjct: 256 AVFLTNQVQS 265
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 175 (66.7 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/171 (26%), Positives = 83/171 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP---HKGVLYICT 99
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ G+++I T
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGIIFIDT 160
Query: 100 ESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MIV 156
E+ F RL + + + D + Y L+ + + G +++
Sbjct: 161 ENTFRPDRLRDIADRFNVDHNAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLI 220
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 221 IDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 271
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 175 (66.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 45/172 (26%), Positives = 83/172 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV----SQPHKGVLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ P +++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFID 160
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>UNIPROTKB|A3E3X4 [details] [associations]
symbol:rad51 "Rad51" species:4754 "Pneumocystis carinii"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865192 EMBL:DQ865193
ProteinModelPortal:A3E3X4 SMR:A3E3X4 Uniprot:A3E3X4
Length = 343
Score = 175 (66.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + + L + D + Y D + L Q+ E++ +
Sbjct: 162 IDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYN-ADHQLQLLGQAANMMAESRFSL 220
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R +A + R + L L+ ++ I V+ TNQV +
Sbjct: 221 LIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVA 273
>UNIPROTKB|A3E3X6 [details] [associations]
symbol:rad51 "Rad51" species:263815 "Pneumocystis murina"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865194 EMBL:DQ865195
ProteinModelPortal:A3E3X6 SMR:A3E3X6 Uniprot:A3E3X6
Length = 343
Score = 175 (66.7 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 102 ISITTGSKQLDTLLAGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 161
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSG--FIENKVGM 154
I TE F RL + + L + D + Y D + L Q+ E++ +
Sbjct: 162 IDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYARAYN-ADHQLQLLGQAANMMAESRFSL 220
Query: 155 IVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++DS ++R +A + R + L L+ ++ I V+ TNQV +
Sbjct: 221 LIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQRLADEYGIAVVITNQVVA 273
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 175 (66.7 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 46/172 (26%), Positives = 82/172 (47%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L+GG+ G ITEL G GK+Q+C + ++ Q+ G LY
Sbjct: 122 ITITTGSKQLDTLLQGGVETGSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLY 181
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y L+ + + E++ ++
Sbjct: 182 IDTEGTFRPVRLLAVADRYGLNGEEVLDNVAYARAYNADHQLELLQQAANMMSESRFSLL 241
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R ++ + R + L L+ + I V+ TNQV +
Sbjct: 242 VVDSCTALYRTDFSGRGELSARQMHLARFMRTLQRLADEFGIAVVITNQVVA 293
>RGD|1307611 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:10116
"Rattus norvegicus" [GO:0000239 "pachytene" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA;ISO]
[GO:0001541 "ovarian follicle development" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007276 "gamete generation" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 RGD:1307611 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006281 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141
GO:GO:0000239 EMBL:CH473950 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 OrthoDB:EOG4F7NKC
GeneTree:ENSGT00550000075091 IPI:IPI00366298 RefSeq:NP_001124039.1
UniGene:Rn.45495 Ensembl:ENSRNOT00000018526 GeneID:362960
KEGG:rno:362960 UCSC:RGD:1307611 NextBio:681931 Uniprot:D3ZJ85
Length = 340
Score = 174 (66.3 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 44/172 (25%), Positives = 85/172 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ + + G +++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGADGYSGGKIIFID 160
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++DSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 221 IVDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 173 (66.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ + + G +++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 173 (66.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ + + G +++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFID 160
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 161 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 173 (66.0 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 45/172 (26%), Positives = 85/172 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS++FD +L GGI + ITE G GKTQL +C++ Q+ + + G +++I
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFID 160
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 161 TENTFRPDRLRDIADRFNVDHEAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLL 220
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 221 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 272
>UNIPROTKB|Q50LF6 [details] [associations]
symbol:tilDmc1 "RecA homolog Dmc1" species:8128
"Oreochromis niloticus" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504 GO:GO:0000150
EMBL:AERX01002235 EMBL:AB182646 RefSeq:XP_003438754.1
UniGene:Oni.44877 SMR:Q50LF6 Ensembl:ENSONIT00000024880
GeneID:100534532 Uniprot:Q50LF6
Length = 342
Score = 172 (65.6 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 46/172 (26%), Positives = 84/172 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
V+TGS++FD +L GG+ + ITE G GKTQL +C++ Q+ + G V++I
Sbjct: 103 VTTGSQEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYSGGKVIFID 162
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 163 TENTFRPDRLRDIADRFNVDHDAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 223 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFITNQMTA 274
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 175 (66.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 51/172 (29%), Positives = 80/172 (46%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS++FDSIL GG + I+E+ G CGKTQL M + Q+ + G V YI
Sbjct: 98 ISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYID 157
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMI 155
TE F R+ Q+ E + + I ++L TL + F+ + ++
Sbjct: 158 TEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKE--FVGGEYRLL 215
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI FR + + R + L ++ + + V+ TNQV S
Sbjct: 216 IIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 175 (66.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 51/172 (29%), Positives = 80/172 (46%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS++FDSIL GG + I+E+ G CGKTQL M + Q+ + G V YI
Sbjct: 98 ISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYID 157
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMI 155
TE F R+ Q+ E + + I ++L TL + F+ + ++
Sbjct: 158 TEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKE--FVGGEYRLL 215
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI FR + + R + L ++ + + V+ TNQV S
Sbjct: 216 IIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 175 (66.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 51/172 (29%), Positives = 80/172 (46%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS++FDSIL GG + I+E+ G CGKTQL M + Q+ + G V YI
Sbjct: 98 ISTGSKQFDSILGGGFQSMSISEVFGEFRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYID 157
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEF---IDLKRTLESQSGFIENKVGMI 155
TE F R+ Q+ E + + I ++L TL + F+ + ++
Sbjct: 158 TEGTFRPERIGQIAERFGVDPDSAKENIAYARALNSEHQLELLNTLSKE--FVGGEYRLL 215
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI FR + + R + L ++ + + V+ TNQV S
Sbjct: 216 IIDSIMNCFRVDFCGRGELADRQQKLNQFLMKLAHMAEEFNVCVLMTNQVQS 267
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 170 (64.9 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 61/214 (28%), Positives = 96/214 (44%)
Query: 6 QMLKL-GFQEWEVNXXXXXXXX---XAFQVGKNPIDMTE--IVVSTGSEKFDSILKGGIH 59
Q+LK+ G E +V +F G D + +V+STGS+ D IL GG+
Sbjct: 65 QLLKIKGMSEAKVEKIKEAAQKIHGSSFATGVEIQDKRKRVLVISTGSKLVDGILGGGVM 124
Query: 60 AGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELS 115
+ ITE+ G GKTQL M + Q+ + G V YI TE F R+ + +
Sbjct: 125 SQSITEVYGEYRTGKTQLAHTMSVVAQLPPEYGGAAGKVAYIDTEGTFRPDRIRAIADRF 184
Query: 116 PLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENK-VGMIVIDSIAGIFRNTYA-EDK 172
+ + I + + E + F E+K +++IDSI +FR Y+ +
Sbjct: 185 GVDGTMALENILYARAFNSEHQMELINECSARFAEDKDFRLLIIDSIMALFRVDYSGRGE 244
Query: 173 YVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+R + + L +LS + I V+ TNQV S
Sbjct: 245 LSERQQKLAQMLSKLTKLSEEFNIAVLMTNQVQS 278
>ASPGD|ASPL0000057020 [details] [associations]
symbol:uvsC species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006312 "mitotic recombination" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0030998 "linear element" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0000150 "recombinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProteinModelPortal:C8VSQ3
SMR:C8VSQ3 EnsemblFungi:CADANIAT00001386 Uniprot:C8VSQ3
Length = 348
Score = 170 (64.9 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 47/172 (27%), Positives = 79/172 (45%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
I ++TGS++ D++L GGI G ITE+ G GK+Q+C + ++ Q+ G LY
Sbjct: 101 ISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLY 160
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F RL + + L + D + Y + L S + E + ++
Sbjct: 161 IDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMMCETRFSLL 220
Query: 156 VIDSIAGIFRNTY-AEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
V+DS ++R + + R + L L+ + I V+ TNQV +
Sbjct: 221 VVDSATSLYRTDFNGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVVA 272
>UNIPROTKB|Q9GRA3 [details] [associations]
symbol:CnDmc1 "DMC1 homologue CnDMC1" species:6087 "Hydra
vulgaris" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AB047581 ProteinModelPortal:Q9GRA3 SMR:Q9GRA3 Uniprot:Q9GRA3
Length = 331
Score = 169 (64.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHK---G-VLYIC 98
+STGS + D +L GGI + ITE G GKTQ+ +C++ Q+ P+ G V++I
Sbjct: 92 ISTGSMELDKLLGGGIESMSITEAFGEFRTGKTQISHTLCVTAQLPGPNNYPGGKVMFID 151
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + L I Y L+ S + G ++
Sbjct: 152 TENTFRPNRLRSIADRFNLDHEAMLGNIVFCRAYTSEQQFEVLDMVSAKFHEEAGVFKLL 211
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR Y+ + R + + L ++S ++ + V TNQ+T+
Sbjct: 212 IIDSIMALFRVDYSGRGELADRQQKLGQMLSKLQKISEEYNVAVWITNQMTA 263
>UNIPROTKB|F1SA21 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:CT797462
Ensembl:ENSSSCT00000002560 Uniprot:F1SA21
Length = 252
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 47/157 (29%), Positives = 77/157 (49%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKGVLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M L + + V+YI
Sbjct: 83 LSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPIDMGGLEGAVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFI---DLKRTLES-QSGFIEN 150
TES F RL ++ E +K+ +T H Y + ++ + +ES + I
Sbjct: 143 TESAFSAERLVEMAESRFPRYFSTEEKLLLTVSKVHLYRELSCDEVLQRIESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYL 187
V +++IDS+A + R + D +Q +MR+ +L
Sbjct: 203 GVKLVIIDSVASVVRKEF--DTQLQG--NMRERNKFL 235
>UNIPROTKB|E1BVI8 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 OMA:CIMMSVL GeneTree:ENSGT00550000074609
EMBL:AADN02003180 IPI:IPI00812156 Ensembl:ENSGALT00000015453
Uniprot:E1BVI8
Length = 275
Score = 165 (63.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 47/148 (31%), Positives = 71/148 (47%)
Query: 33 KNPIDMTEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCL--SLQVSQP 90
+ I+ + + T D +L GGI G +TEL+ GCGKTQ C+ M + +L VS
Sbjct: 73 RRSINPSAAFLPTSLHSLDKVLHGGIPCGSLTELTSPPGCGKTQFCITMSVLATLPVSMG 132
Query: 91 --HKGVLYICTESVFPTARLAQLCELSPLAKPKCSDKIF-IT---HCYEFID----LKRT 140
V+YI TES F RL ++ +K+F +T H Y + LKR
Sbjct: 133 GLDGAVIYIDTESAFSAERLIEIAGNRFPTYFDSDEKLFCMTRSIHLYRELTCDSVLKRI 192
Query: 141 LESQSGFIENKVGMIVIDSIAGIFRNTY 168
+ I K+ +I+IDS+A + R +
Sbjct: 193 KSLEEEIISKKIKLIIIDSVASVVRKEF 220
>RGD|1560681 [details] [associations]
symbol:Rad51b "RAD51 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1560681
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
OrthoDB:EOG4G4GQP IPI:IPI00367665 Ensembl:ENSRNOT00000016459
UCSC:RGD:1560681 Uniprot:D4A4Y7
Length = 258
Score = 163 (62.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 46/138 (33%), Positives = 67/138 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC----LSLQVSQPHKGVLYIC 98
+ST D L GG+ G +TE++G GCGKTQ C+ M L ++ VLYI
Sbjct: 83 LSTTLGALDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVLATLPTRLGGLEGAVLYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----H-CYEFI--DLKRTLES-QSGFIEN 150
TES F RL ++ E +K+ +T H C E L + LES + I
Sbjct: 143 TESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELTCEGLLQRLESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFRNTY 168
V ++++DSIA + R +
Sbjct: 203 GVKLVIVDSIASVVRKEF 220
>UNIPROTKB|Q50LF7 [details] [associations]
symbol:eDmc1 "RecA homolog DMC1" species:7937 "Anguilla
japonica" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 EMBL:AB182645 EMBL:AB201845
ProteinModelPortal:Q50LF7 SMR:Q50LF7 Uniprot:Q50LF7
Length = 339
Score = 167 (63.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 45/172 (26%), Positives = 84/172 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS +FD ++ GGI + ITE G GKTQL +C++ Q+ + G V++I
Sbjct: 100 ITTGSLEFDKLIGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEDGYTGGKVIFID 159
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + + D + Y L+ + + G ++
Sbjct: 160 TENTFRPDRLKDIADRFSVDQEAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLL 219
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 220 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 271
>UNIPROTKB|Q2HJ51 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 EMBL:BC113309 IPI:IPI00716231 RefSeq:NP_001039769.1
UniGene:Bt.59591 ProteinModelPortal:Q2HJ51 STRING:Q2HJ51
Ensembl:ENSBTAT00000025404 GeneID:529507 KEGG:bta:529507 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 InParanoid:Q2HJ51
OMA:QARTQDE OrthoDB:EOG4K0QP3 NextBio:20875047 Uniprot:Q2HJ51
Length = 326
Score = 165 (63.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ GA G GKTQ+CL C++ V+ + VLYI +
Sbjct: 81 ILSTGIGSLDKLLDAGLYTGEVTEIVGAPGSGKTQVCL--CVAAHVAHGLQQNVLYIDSN 138
Query: 101 SVFPTARLAQLCEL-SPLAKPKCS--DKIFITHCYEFIDLKRTLESQSGFIENKVG---- 153
+R+ QL + +P + + +I + ++ + L+ G + +V
Sbjct: 139 GGLTASRILQLLQARTPDEEEQAGALQRIQVVRAFDIFQMLDVLQDLRGAVSQQVSSSSG 198
Query: 154 ---MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
++V+DS+A + + A M LA L L+ + V+ TN +T
Sbjct: 199 TLKVVVVDSVAAVVAPLLGGQQREGLAL-MMQLARELKTLARDLSVAVLVTNHMTRDRD- 256
Query: 211 SDKNIPALGLTYERAHDMRDLAHYLHEI-SIKHWIVVICT 249
S + PALG ++ R L S+ W VV T
Sbjct: 257 SGQLKPALGRSWSFVPSTRLLLDSTQSSGSLGSWRVVCLT 296
>FB|FBgn0003482 [details] [associations]
symbol:spn-D "spindle D" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IGI] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0009951 "polarity
specification of dorsal/ventral axis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=TAS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IMP] [GO:0046843 "dorsal appendage formation"
evidence=IMP] InterPro:IPR020588 PROSITE:PS50162 EMBL:AE014297
GO:GO:0005524 GO:GO:0009949 GO:GO:0007294 GO:GO:0003677
GO:GO:0006200 GO:GO:0008298 GO:GO:0046843 GO:GO:0031023
GO:GO:0030720 GO:GO:0030717 GO:GO:0007131 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
KO:K10870 GO:GO:0009951 HSSP:Q06609 EMBL:AY071162 EMBL:AY257540
RefSeq:NP_733200.1 UniGene:Dm.6085 SMR:Q8SZ30 STRING:Q8SZ30
EnsemblMetazoa:FBtr0085116 GeneID:318579 KEGG:dme:Dmel_CG31069
UCSC:CG31069-RA CTD:318579 FlyBase:FBgn0003482 InParanoid:Q8SZ30
OMA:CLNVQIP OrthoDB:EOG4MKKZ1 GenomeRNAi:318579 NextBio:845512
Uniprot:Q8SZ30
Length = 270
Score = 162 (62.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 60/193 (31%), Positives = 88/193 (45%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+ TG + D+ GGI G + EL G SG GKTQ+CLQ+CL++Q+ + G+ L+I
Sbjct: 46 ILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFID 105
Query: 99 TESVFPTARLAQLC-ELS-------PLAKP-KCSDKIFITHCYEFIDLKRT-LESQSGFI 148
T F RL L +L P K K KI C + L T L +
Sbjct: 106 TRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLV 165
Query: 149 ENK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSA 207
++ + +IVIDS+A R ED R + +L + L +H + + TN +T
Sbjct: 166 DHPDIKLIVIDSLAFTLR--MLEDG-AHRYEMLLELHESMRRLQRQHELTWVFTNVLTHR 222
Query: 208 MTHSDKNI-PALG 219
+ PALG
Sbjct: 223 YVKQKFQVEPALG 235
>ZFIN|ZDB-GENE-060331-93 [details] [associations]
symbol:dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
ZFIN:ZDB-GENE-060331-93 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:AB182999 IPI:IPI00832294 RefSeq:NP_001018618.1
UniGene:Dr.92382 ProteinModelPortal:Q50LF4 SMR:Q50LF4 STRING:Q50LF4
GeneID:553953 KEGG:dre:553953 InParanoid:Q50LF4 NextBio:20880545
Uniprot:Q50LF4
Length = 342
Score = 165 (63.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 45/172 (26%), Positives = 83/172 (48%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV--SQPHKG--VLYIC 98
++TGS +FD +L GG+ + ITE G GKTQL +C++ Q+ + G V++I
Sbjct: 103 ITTGSLEFDKLLGGGVESMAITEAFGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFID 162
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFIENKVG---MI 155
TE+ F RL + + + D + Y L+ + + G ++
Sbjct: 163 TENTFRPERLKDIADRFNVDHEAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLL 222
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+IDSI +FR ++ + +R + + L ++S ++ + V TNQ+T+
Sbjct: 223 IIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTA 274
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 162 (62.1 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 53/199 (26%), Positives = 84/199 (42%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ ++TG + D +L GGI ITE G GKTQL +C++ Q+ KG V Y
Sbjct: 106 VKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAY 165
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I TE F R+ + E + D I Y + L + + E ++
Sbjct: 166 IDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRIL 225
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS----AMTH 210
++DSI +FR + + R + + L +++ + + V TNQV + M
Sbjct: 226 IVDSIIALFRVDFTGRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFI 285
Query: 211 SDKNIPALGLTYERAHDMR 229
SD PA G A +R
Sbjct: 286 SDPKKPAGGHVLAHAATIR 304
>UNIPROTKB|E2R3P3 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:AAEX03005799
Ensembl:ENSCAFT00000026122 Uniprot:E2R3P3
Length = 272
Score = 158 (60.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/157 (29%), Positives = 74/157 (47%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
++T D L GG+ G +TE++G GCGKTQ C+ M + + G V+YI
Sbjct: 83 LATTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGDVVYID 142
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFIT----HCYEFID----LKRTLESQSGFIEN 150
TES F RL ++ E +K+ +T H Y + L+R + I
Sbjct: 143 TESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELSCDAVLQRIESLEEEIISK 202
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYL 187
V +++IDS+A + R + D +Q +MR+ +L
Sbjct: 203 GVKLVIIDSVASVVRKEF--DTQLQG--NMRERNKFL 235
>UNIPROTKB|E1BVK2 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000074609 KO:K10871 CTD:5892 OMA:QARTQDE
EMBL:AADN02025945 IPI:IPI00597433 RefSeq:NP_001185575.1
UniGene:Gga.9680 ProteinModelPortal:E1BVK2
Ensembl:ENSGALT00000003463 GeneID:417528 KEGG:gga:417528
NextBio:20820813 Uniprot:E1BVK2
Length = 327
Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 49/192 (25%), Positives = 96/192 (50%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++ TG+ D +L G++ G +TEL+GA G GKTQ+CL + S+ + + V ++ +
Sbjct: 81 ILPTGNPSLDQLLDAGLYTGEVTELAGAPGSGKTQVCLSIAASVSLGL-RQHVFFLDSTG 139
Query: 102 VFPTARLAQLCELSPLAKPK---CSDKIFITHCYEFIDLKRTL----ESQSGFIENKVG- 153
F +RL Q+ + K + ++ + ++ ++ R L + S +E+ G
Sbjct: 140 GFTASRLYQMLQARVEDKEEQLEALQRVQVVRMFDIYEMLRALHEVRDCLSQQVESSAGP 199
Query: 154 --MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVT-SAMTH 210
++IDS++ + + + + M LA L L+ + + V+ TNQVT + T
Sbjct: 200 LKAVLIDSVSAVL-SPLLGGRQSEGLAIMMQLARELKTLAKEFSVAVVVTNQVTRDSSTG 258
Query: 211 SDKNIPALGLTY 222
+ K+ ALG ++
Sbjct: 259 ALKS--ALGRSW 268
>UNIPROTKB|O75771 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 EMBL:CH471147
GO:GO:0007131 Orphanet:145 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 EMBL:AC022916 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OMA:QARTQDE
OrthoDB:EOG4K0QP3 EMBL:Y15572 EMBL:AF034956 EMBL:AB013341
EMBL:AB016223 EMBL:AB016224 EMBL:AB016225 EMBL:AB018360
EMBL:AB018361 EMBL:AB018362 EMBL:AB018363 EMBL:AB020412
EMBL:AY623116 EMBL:AK296241 EMBL:BC014422 EMBL:AL117459
IPI:IPI00216381 IPI:IPI00216382 IPI:IPI00216383 IPI:IPI00216384
IPI:IPI00216386 IPI:IPI00291454 IPI:IPI00411326 IPI:IPI00791891
PIR:T17247 RefSeq:NP_001136043.1 RefSeq:NP_002869.3
RefSeq:NP_598332.1 UniGene:Hs.631757 PDB:2KZ3 PDBsum:2KZ3
ProteinModelPortal:O75771 SMR:O75771 DIP:DIP-24265N IntAct:O75771
MINT:MINT-127795 STRING:O75771 PhosphoSite:O75771 PRIDE:O75771
DNASU:5892 Ensembl:ENST00000335858 Ensembl:ENST00000345365
Ensembl:ENST00000357906 Ensembl:ENST00000360276
Ensembl:ENST00000394589 GeneID:5892 KEGG:hsa:5892 UCSC:uc002hir.2
UCSC:uc002his.2 GeneCards:GC17M033427 HGNC:HGNC:9823 MIM:602954
MIM:614291 neXtProt:NX_O75771 PharmGKB:PA34179 PhylomeDB:O75771
GenomeRNAi:5892 NextBio:22920 ArrayExpress:O75771 Bgee:O75771
Genevestigator:O75771 GermOnline:ENSG00000185379 Uniprot:O75771
Length = 328
Score = 160 (61.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 50/192 (26%), Positives = 91/192 (47%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + VLY+ +
Sbjct: 81 ILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CMAANVAHGLQQNVLYVDSN 138
Query: 101 SVFPTARLAQLCELSPLAKPKCSD---KIFITHCYEFIDLKRTLESQSGFIENKV-G--- 153
+RL QL + + + ++ +I + H ++ + L+ G + +V G
Sbjct: 139 GGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSG 198
Query: 154 ---MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
++V+DS+ + + A M LA L L+ + V+ TN +T
Sbjct: 199 TVKVVVVDSVTAVVSPLLGGQQREGLAL-MMQLARELKTLARDLGMAVVVTNHITRDRD- 256
Query: 211 SDKNIPALGLTY 222
S + PALG ++
Sbjct: 257 SGRLKPALGRSW 268
>UNIPROTKB|H7C1R0 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C1R0 Ensembl:ENST00000413590 Uniprot:H7C1R0
Length = 257
Score = 110 (43.8 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 31/112 (27%), Positives = 57/112 (50%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDL 183
I+ C ++ +L + F+ +KV ++++D IA FR+ D R + L
Sbjct: 88 IYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDL--DDLSLRTRLLNGL 145
Query: 184 AHYLHELSIKHRIVVICTNQVTSAMTHSDKN-IPALGLTYERAHDMRDLAHY 234
A + L+ HR+ VI TNQ+T+ + + +PALG ++ A +R + H+
Sbjct: 146 AQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIFHW 197
Score = 88 (36.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 65 ELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQL 111
E+ GA G GKTQLC+Q+ + +Q+ + GV ++I TE F R+ L
Sbjct: 2 EICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDL 52
Score = 70 (29.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 183 LAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYERAHDMRDLAHYLHEISIKH 242
L +L E S K R+V++ + + H ++ L L R + LA + ++ H
Sbjct: 106 LPDFLSEHS-KVRLVIV--DGIAFPFRH---DLDDLSL---RTRLLNGLAQQMISLANNH 156
Query: 243 WIVVICTNQVTSAMTHSDKN-IPALGLSWSN 272
+ VI TNQ+T+ + + +PALG SW +
Sbjct: 157 RLAVILTNQMTTKIDRNQALLVPALGESWGH 187
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 157 (60.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 50/171 (29%), Positives = 79/171 (46%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYIC 98
+STGS+ D IL GGI + ++E+ G GKTQL M + Q+ G V YI
Sbjct: 110 ISTGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQLAHTMSVVAQLPPDLGGASGKVAYID 169
Query: 99 TESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTL-ESQSGFIENK-VGMIV 156
TE F R+ + E + + I + + E F E+K +++
Sbjct: 170 TEGTFRPDRIRSIAERFGVDGSLALENILYARAFNSEHQMELINECSMRFAEDKDFRLLI 229
Query: 157 IDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+DSI +FR Y+ + +R + + L +LS ++ I V+ TNQV S
Sbjct: 230 VDSIMALFRVDYSGRGELSERQQKLAQMLSRLTKLSEEYNIAVLLTNQVQS 280
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 157 (60.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ + TGS D +L GGI G ITE+ G GKTQLC + + Q+ G +Y
Sbjct: 116 VQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMY 175
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I T + F R+ + + + + I + Y L + + E++ ++
Sbjct: 176 IDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVV 235
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++D FRN Y +R + L +L+ ++ + VI TNQV +
Sbjct: 236 IVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVA 287
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ + TGS D +L GGI G ITE+ G GKTQLC + + Q+ G +Y
Sbjct: 154 VQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMY 213
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I T + F R+ + + + + I + Y L + + E++ ++
Sbjct: 214 IDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVV 273
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++D FRN Y +R + L +L+ ++ + VI TNQV +
Sbjct: 274 IVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVA 325
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 157 (60.3 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 44/172 (25%), Positives = 75/172 (43%)
Query: 41 IVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLY 96
+ + TGS D +L GGI G ITE+ G GKTQLC + + Q+ G +Y
Sbjct: 154 VQIRTGSASLDRLLGGGIETGSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMY 213
Query: 97 ICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGFI-ENKVGMI 155
I T + F R+ + + + + I + Y L + + E++ ++
Sbjct: 214 IDTNATFRPERIIAIAQRYNMDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVV 273
Query: 156 VIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
++D FRN Y +R + L +L+ ++ + VI TNQV +
Sbjct: 274 IVDCATAHFRNEYTGRGDLAERQMKLSAFLKCLAKLADEYGVAVIITNQVVA 325
>MGI|MGI:1261809 [details] [associations]
symbol:Rad51d "RAD51 homolog D" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1261809 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K10871 CTD:5892 HOGENOM:HOG000049134
HOVERGEN:HBG057455 OMA:QARTQDE OrthoDB:EOG4K0QP3 EMBL:AB007040
EMBL:AF034955 EMBL:Y15570 EMBL:AK017835 EMBL:BC049136
IPI:IPI00116701 RefSeq:NP_035365.1 UniGene:Mm.9286
ProteinModelPortal:O55230 SMR:O55230 MINT:MINT-415416 STRING:O55230
PhosphoSite:O55230 PRIDE:O55230 Ensembl:ENSMUST00000018985
GeneID:19364 KEGG:mmu:19364 InParanoid:O55230 NextBio:296433
Bgee:O55230 CleanEx:MM_RAD51L3 Genevestigator:O55230
GermOnline:ENSMUSG00000018841 Uniprot:O55230
Length = 329
Score = 151 (58.2 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/192 (25%), Positives = 87/192 (45%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + VLY+ +
Sbjct: 81 ILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CVAANVAHSLQQNVLYVDSN 138
Query: 101 SVFPTARLAQLCELSPLAKPKCSD---KIFITHCYEFI-------DLKRTLESQSGFIEN 150
+RL QL + + K + +I + ++ DL+ T+ Q
Sbjct: 139 GGMTASRLLQLLQARTQDEEKQASALQRIQVVRSFDIFRMLDMLQDLRGTIAQQEATSSG 198
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
V ++++DS+ + + A M LA L L+ + V+ TN +T
Sbjct: 199 AVKVVIVDSVTAVVAPLLGGQQREGLAL-MMQLARELKILARDLGVAVVVTNHLTRDWD- 256
Query: 211 SDKNIPALGLTY 222
+ PALG ++
Sbjct: 257 GRRFKPALGRSW 268
>RGD|1306944 [details] [associations]
symbol:Rad51d "RAD51 homolog D (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306944
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 UniGene:Rn.206266
IPI:IPI00782474 Ensembl:ENSRNOT00000055971 Uniprot:D4A2C5
Length = 233
Score = 146 (56.5 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + VLY+ +
Sbjct: 81 ILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCL--CVAANVAHSLQQNVLYVDSN 138
Query: 101 SVFPTARLAQLCELSPLAKPKCSD---KIFITHCYEFI-------DLKRTLESQSGFIEN 150
+RL QL + + K + +I + H ++ DL+ T+ Q+
Sbjct: 139 GGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLDMLQDLRGTMAQQATASSG 198
Query: 151 KVGMIVIDSIAGI 163
V ++++DS+ +
Sbjct: 199 TVKVVIVDSVTAV 211
>UNIPROTKB|G3V399 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:AL049840 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V399 SMR:G3V399 Ensembl:ENST00000553361
ArrayExpress:G3V399 Bgee:G3V399 Uniprot:G3V399
Length = 150
Score = 132 (51.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV 94
+S G D++L+GG+ GITEL+G S GKTQL LQ+CL++Q + H G+
Sbjct: 82 LSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGL 133
>ZFIN|ZDB-GENE-040426-2490 [details] [associations]
symbol:rad51d "RAD51 homolog D (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
ZFIN:ZDB-GENE-040426-2490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OrthoDB:EOG4K0QP3
EMBL:BC066407 IPI:IPI00512042 RefSeq:NP_996959.1 UniGene:Dr.19061
ProteinModelPortal:Q6NYZ3 STRING:Q6NYZ3 PRIDE:Q6NYZ3 GeneID:404608
KEGG:dre:404608 InParanoid:Q6NYZ3 NextBio:20817676
ArrayExpress:Q6NYZ3 Bgee:Q6NYZ3 Uniprot:Q6NYZ3
Length = 327
Score = 149 (57.5 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 52/200 (26%), Positives = 94/200 (47%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTES 101
++STGS D +L G++ G ITEL+G+ G GKTQ+C + +++ Q + V+YI T+
Sbjct: 81 ILSTGSPSLDKLLDSGLYTGEITELTGSPGSGKTQVCFSVAVNIS-HQLKQTVVYIDTKG 139
Query: 102 VFPTARLAQLCEL-SPLAKPKCS--DKIFITHCYEFIDLKRTLES--QSGFIENKVG--- 153
RL Q+ + +P + + KI + ++ L L++ +G + VG
Sbjct: 140 GMCANRLLQMLQTKTPNEQEQMEALQKIKVFRVFDVFSLLACLQNLRSTGLQKMSVGGGS 199
Query: 154 --MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHS 211
+++DS++ + + K + + +A L ++ I V+ TN VT
Sbjct: 200 VKALMVDSVSAVL-SPILGGKQNEGMSLLMQVAGELKMIAKDFNIAVLVTNHVTKDGNGQ 258
Query: 212 DKNIPALGLTYERAHDMRDL 231
K LGL++ R L
Sbjct: 259 VK--AGLGLSWSHVPRTRVL 276
>UNIPROTKB|E2RP02 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 CTD:5892 OMA:QARTQDE EMBL:AAEX03006625 RefSeq:XP_548263.2
Ensembl:ENSCAFT00000029092 GeneID:491143 KEGG:cfa:491143
NextBio:20864025 Uniprot:E2RP02
Length = 328
Score = 147 (56.8 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + V+YI +
Sbjct: 81 ILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CVAANVAYGLQQNVVYIDSN 138
Query: 101 SVFPTARLAQLCEL-SPLAKPKCS--DKIFITHCYEFI-------DLKRTLESQSGFIEN 150
+R+ QL + +P + + +I + ++ D + TL Q
Sbjct: 139 GGLTASRILQLLQARTPDEEVQAGALQRIQVVRAFDIFQMLDVLQDCRGTLSQQVSSASG 198
Query: 151 KVGMIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTH 210
V ++++DS+ + + A M LA L L+ + V+ TN +T
Sbjct: 199 TVKVVIVDSVTAVVSPLLGGQQREGLAL-MMQLARELKTLARDLGMAVVVTNHMTRDRDS 257
Query: 211 SDKNIPALGLTY 222
+ PALG ++
Sbjct: 258 GELK-PALGRSW 268
>UNIPROTKB|K7EN92 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 EMBL:AC022916
HGNC:HGNC:9823 Ensembl:ENST00000592577 Uniprot:K7EN92
Length = 249
Score = 142 (55.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 35/133 (26%), Positives = 68/133 (51%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + VLY+ +
Sbjct: 83 ILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CMAANVAHGLQQNVLYVDSN 140
Query: 101 SVFPTARLAQLCELSPLAKPKCSD---KIFITHCYEFIDLKRTLESQSGFIENKV-G--- 153
+RL QL + + + ++ +I + H ++ + L+ G + +V G
Sbjct: 141 GGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSG 200
Query: 154 ---MIVIDSIAGI 163
++V+DS+ +
Sbjct: 201 TVKVVVVDSVTAV 213
>UNIPROTKB|E9PNT5 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00980924
ProteinModelPortal:E9PNT5 SMR:E9PNT5 Ensembl:ENST00000527860
UCSC:uc001zmn.1 ArrayExpress:E9PNT5 Bgee:E9PNT5 Uniprot:E9PNT5
Length = 172
Score = 126 (49.4 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG---- 93
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ Q+ G
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGK 156
Query: 94 VLYICTESVFPTARL 108
+YI TE F RL
Sbjct: 157 AMYIDTEGTFRPERL 171
>UNIPROTKB|D3ZZP3 [details] [associations]
symbol:Rad51l3 "Protein Rad51l3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:CH473948 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 IPI:IPI00195181 UniGene:Rn.206266
Ensembl:ENSRNOT00000011912 Uniprot:D3ZZP3
Length = 275
Score = 133 (51.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 32/115 (27%), Positives = 58/115 (50%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + VLY+ +
Sbjct: 81 ILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVCL--CVAANVAHSLQQNVLYVDSN 138
Query: 101 SVFPTARLAQLCELSPLAKPKCSD---KIFITHCYEFIDLKRTLESQSGFIENKV 152
+RL QL + + K + +I + H ++ + L+ G + +V
Sbjct: 139 GGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLDMLQDLRGTMAQQV 193
Score = 43 (20.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 251 QVTSAMTH---SDKNIPALGLSWS 271
QVT+ +T S + PALG SWS
Sbjct: 192 QVTNHLTRDRDSRRFKPALGRSWS 215
>UNIPROTKB|I3LTG9 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:QARTQDE
EMBL:FP565655 Ensembl:ENSSSCT00000023297 Uniprot:I3LTG9
Length = 322
Score = 128 (50.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 42 VVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQP-HKGVLYICTE 100
++STG D +L G++ G +TE+ G G GKTQ+CL C++ V+ + VLYI +
Sbjct: 81 ILSTGIRSLDKLLDAGLYTGEVTEIVGGPGSGKTQVCL--CVAANVAHSLQQKVLYIDSN 138
Query: 101 SVFPTARLAQLCELSPLAKPKCS---DKIFITHCYEFIDLKRTLESQSGFIENKVG---- 153
+R+ QL + + + + +I + ++ + L+ G + +V
Sbjct: 139 GGLTASRILQLLQARTSDEEEQAGALQRIQVVRVFDIFQMLDVLQDLRGAVAQQVSSSAG 198
Query: 154 ---MIVIDSI-AG 162
++V+DS+ AG
Sbjct: 199 TVKVVVVDSVTAG 211
Score = 50 (22.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 251 QVTSAMTH---SDKNIPALGLSWS 271
QVT+ +T S K+ PALG SWS
Sbjct: 242 QVTNHVTRDRDSGKHKPALGRSWS 265
>UNIPROTKB|E9PJ30 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00976981
ProteinModelPortal:E9PJ30 SMR:E9PJ30 Ensembl:ENST00000525066
ArrayExpress:E9PJ30 Bgee:E9PJ30 Uniprot:E9PJ30
Length = 151
Score = 114 (45.2 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 39 TEIV-VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQV 87
+EI+ ++TGS++ D +L+GGI G ITE+ G GKTQ+C + ++ QV
Sbjct: 97 SEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQV 146
>DICTYBASE|DDB_G0284507 [details] [associations]
symbol:DDB_G0284507 "putative Rad51C protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
dictyBase:DDB_G0284507 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
EMBL:AAFI02000066 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
RefSeq:XP_638535.1 HSSP:Q55075 ProteinModelPortal:Q54PJ7
EnsemblProtists:DDB0232315 GeneID:8624628 KEGG:ddi:DDB_G0284507
InParanoid:Q54PJ7 KO:K10870 OMA:VREMATH Uniprot:Q54PJ7
Length = 381
Score = 94 (38.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 29/101 (28%), Positives = 53/101 (52%)
Query: 124 DKIFITHCYEFIDLKRTLESQSGFIE-NK-VGMIVIDSIAGIFRNTYAEDKYVQRAHDMR 181
+ I+ Y +I++ + F+E NK V +IV+DSI FR + +D + R +
Sbjct: 167 NSIYYYRVYHYIEIISLIHQLPLFLEKNKDVKLIVVDSITYPFRCDF-KDMGL-RTRSLL 224
Query: 182 DLAHYLHELSIKHRIVVICTNQVTSAMTHSDKN---IPALG 219
LA L ++ ++ + V+ NQVT+ ++ + K +P LG
Sbjct: 225 SLAQNLMNIATRYNLAVVVMNQVTTKISPNQKESILVPYLG 265
Score = 83 (34.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYIC 98
+ T + D +L GG ITE+ G G GKT + Q+ ++ + GV +YI
Sbjct: 64 IITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYID 123
Query: 99 TESVFPTARLAQL 111
TE + R+ ++
Sbjct: 124 TEGSYSCQRVREM 136
Score = 78 (32.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 185 HYLHELSIKHRIVVICTNQ------VTSAMTHSDK-NIPALGLTYERAHDMRDLAHYLHE 237
HY+ +S+ H++ + V ++T+ + + +GL R + LA L
Sbjct: 176 HYIEIISLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGL---RTRSLLSLAQNLMN 232
Query: 238 ISIKHWIVVICTNQVTSAMTHSDKN---IPALGLSWSNL 273
I+ ++ + V+ NQVT+ ++ + K +P LG SW+++
Sbjct: 233 IATRYNLAVVVMNQVTTKISPNQKESILVPYLGESWTHI 271
>DICTYBASE|DDB_G0285287 [details] [associations]
symbol:DDB_G0285287 "putative Rad51D protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 dictyBase:DDB_G0285287 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 EMBL:AAFI02000077
RefSeq:XP_001134538.1 ProteinModelPortal:Q1ZXF0
EnsemblProtists:DDB0232317 GeneID:8625032 KEGG:ddi:DDB_G0285287
eggNOG:NOG325687 OMA:NEERSIY ProtClustDB:CLSZ2733543 Uniprot:Q1ZXF0
Length = 354
Score = 114 (45.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 29/80 (36%), Positives = 46/80 (57%)
Query: 44 STGSEKFDSILKG-GIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG-VLYICTES 101
S+G + D +L G G +G I EL G + CGKTQ+ MC SL +SQ + ++YI + +
Sbjct: 90 SSGIKLLDQLLGGNGFTSGEIYELVGNTSCGKTQI--SMCCSLNLSQQYNSNIIYIDSSN 147
Query: 102 VFPTARLAQLCELSPLAKPK 121
F RL ++ + + L K +
Sbjct: 148 SFSPPRLIEIFKSNYLIKQR 167
Score = 58 (25.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/113 (23%), Positives = 51/113 (45%)
Query: 121 KCSDKIFITHCYEFI---DLKRTLESQSGFIENKV---------G--MIVIDSIAGIFRN 166
K D+I + +C++ I +L T++S I +++ G M+VIDSI G
Sbjct: 196 KILDRIKVFNCFDSITLLELLSTIDSTLSIISDEIPTFENQFYKGLKMVVIDSI-GTLLA 254
Query: 167 TYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALG 219
K Q + M ++ + ++ ++I+ + TN + +K ALG
Sbjct: 255 PIIGGKQTQGHYTMMMISRLIKYIADTYQIIFLITNNTVGGNSFDNK--AALG 305
>CGD|CAL0005415 [details] [associations]
symbol:RAD57 species:5476 "Candida albicans" [GO:0033062
"Rhp55-Rhp57 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0030491 "heteroduplex formation" evidence=IEA]
[GO:0000707 "meiotic DNA recombinase assembly" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 CGD:CAL0005415 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 EMBL:AACQ01000076 EMBL:AACQ01000075
KO:K10958 RefSeq:XP_715957.1 RefSeq:XP_716015.1
ProteinModelPortal:Q5A2U1 GeneID:3642333 GeneID:3642354
KEGG:cal:CaO19.2174 KEGG:cal:CaO19.9720 Uniprot:Q5A2U1
Length = 511
Score = 135 (52.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 43/131 (32%), Positives = 58/131 (44%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGVLYICTESV 102
+STG D L GGI G +TE+ GASGCGK+ Q+ + +YI TES
Sbjct: 85 ISTGLPSIDRELGGGIPIGEVTEIFGASGCGKSHFLFQLLSNCGKEFSTSKNIYISTESF 144
Query: 103 FPTARLAQLCELSPLAKPKCSDKIFITHCYE--------FIDLKRTLESQSGFIENKVGM 154
T RL + D+I +C + F L L+S G K +
Sbjct: 145 LETKRLKDFIGRNSSNIDTDLDRISYIYCQDLESQDHILFTQLPLKLDSDKG----KTKL 200
Query: 155 IVIDSIAGIFR 165
+V+DSIA FR
Sbjct: 201 LVLDSIAQHFR 211
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 259 SDKNIPALGLSWSNLI 274
S K +P LG W+ I
Sbjct: 408 SKKIVPTLGYPWATRI 423
>UNIPROTKB|E2R3A3 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR010995 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000075091
EMBL:AAEX03007314 Ensembl:ENSCAFT00000035193 Uniprot:E2R3A3
Length = 285
Score = 94 (38.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
++TGS++FD +L GGI + ITE G GKTQL +C
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLC 140
Score = 73 (30.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 20/90 (22%), Positives = 44/90 (48%)
Query: 119 KPKCSDKIFITHCYEFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQR 176
K + S + H E +D + ++G + +++IDSI +FR ++ + +R
Sbjct: 132 KTQLSHTLCGEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGELAER 187
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + L ++S ++ + V TNQ+T+
Sbjct: 188 QQKLAQMLSRLQKISEEYNVAVFVTNQMTA 217
>UNIPROTKB|B4DMW6 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320 UniGene:Hs.339396
HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171 EMBL:AK297664
ProteinModelPortal:B4DMW6 SMR:B4DMW6 STRING:B4DMW6
Ensembl:ENST00000428462 UCSC:uc011anv.1 ArrayExpress:B4DMW6
Bgee:B4DMW6 Uniprot:B4DMW6
Length = 285
Score = 94 (38.1 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 43 VSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMC 82
++TGS++FD +L GGI + ITE G GKTQL +C
Sbjct: 101 ITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLC 140
Score = 73 (30.8 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 20/90 (22%), Positives = 44/90 (48%)
Query: 119 KPKCSDKIFITHCYEFID-LKRTLESQSGFIENKVGMIVIDSIAGIFRNTYA-EDKYVQR 176
K + S + H E +D + ++G + +++IDSI +FR ++ + +R
Sbjct: 132 KTQLSHTLCGEHQMELLDYVAAKFHEEAGIFK----LLIIDSIMALFRVDFSGRGELAER 187
Query: 177 AHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+ + L ++S ++ + V TNQ+T+
Sbjct: 188 QQKLAQMLSRLQKISEEYNVAVFVTNQMTA 217
>UNIPROTKB|G3V3Q2 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0010033 "response to organic substance" evidence=IEA]
EMBL:AL049840 InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V3Q2 SMR:G3V3Q2 Ensembl:ENST00000554974
ArrayExpress:G3V3Q2 Bgee:G3V3Q2 Uniprot:G3V3Q2
Length = 141
Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/95 (35%), Positives = 47/95 (49%)
Query: 154 MIVIDSIAGIFRNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAM----- 208
++VIDS+A FR + RA ++ L L ELS + V+C NQVT AM
Sbjct: 4 LVVIDSVAAPFRCEFDSQASAPRARHLQSLGATLRELSSAFQSPVLCINQVTEAMEEQGA 63
Query: 209 THS-----DKNI-PALGLTYERAHDMRDLAHYLHE 237
H D+ + PALG+T+ +R LA L E
Sbjct: 64 AHGPLGFWDERVSPALGITWANQLLVRLLADRLRE 98
>UNIPROTKB|J3QR58 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007066 "female meiosis sister
chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
Ensembl:ENST00000461271 Uniprot:J3QR58
Length = 135
Score = 93 (37.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 64 TELSGASGCGKTQLCLQMCLSLQVSQPHKGV----LYICTESVFPTARLAQL 111
TE+ GA G GKTQLC+Q+ + +Q+ + GV ++I TE F R+ L
Sbjct: 4 TEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDL 55
Score = 46 (21.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 126 IFITHCYEFIDLKRTLESQSGFIE--NKVGMIVIDSIAGIFRN 166
I+ C ++ +L + F+ +KV ++++D IA FR+
Sbjct: 91 IYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRH 133
>RGD|1563603 [details] [associations]
symbol:Rad51 "RAD51 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000800 "lateral element"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 RGD:1563603
GO:GO:0005524 GO:GO:0005634 GO:GO:0042493 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 IPI:IPI00948014 Ensembl:ENSRNOT00000068607
UCSC:RGD:1563603 ArrayExpress:F1LZR2 Uniprot:F1LZR2
Length = 236
Score = 117 (46.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 63 ITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCELSPLA 118
ITE+ G GKTQ+C + ++ Q+ G +YI TE F RL + E L+
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLS 60
Query: 119 KPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKVGMIVIDSIAGIFRNTYAEDKYVQRA 177
D + + + L S +E++ ++++DS ++R Y+ + A
Sbjct: 61 GSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELS-A 119
Query: 178 HDMRDLAHYLH---ELSIKHRIVVICTNQVTS 206
M LA +L L+ + + V+ TNQV +
Sbjct: 120 RQMH-LARFLRMLLRLADEFGVAVVITNQVVA 150
>UNIPROTKB|H7C2Q5 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C2Q5 Ensembl:ENST00000425173 Bgee:H7C2Q5
Uniprot:H7C2Q5
Length = 213
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 39 TEIVVSTGSEKFDSILKGGIHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKGV---- 94
T+ + T D IL GG+ TE+ GA G GKTQLC+Q+ + +Q+ + GV
Sbjct: 28 TQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEA 87
Query: 95 LYICTESVFPTARLAQL 111
++I TE F R+ L
Sbjct: 88 VFIDTEGSFMVDRVVDL 104
>UNIPROTKB|E2REH7 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677 GO:GO:0001701
GO:GO:0043524 GO:GO:0010332 GO:GO:0050769 GO:GO:0000724
GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10879 CTD:7516 OMA:DTDYHFD GeneTree:ENSGT00390000020445
EMBL:AAEX03010293 EMBL:AAEX03010294 RefSeq:XP_532771.3
ProteinModelPortal:E2REH7 Ensembl:ENSCAFT00000007971 GeneID:475548
KEGG:cfa:475548 NextBio:20851370 Uniprot:E2REH7
Length = 279
Score = 112 (44.5 bits), Expect = 0.00045, P = 0.00045
Identities = 49/204 (24%), Positives = 87/204 (42%)
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+H G I E G G GKT++ + + + G VL+I T+ F RL + E
Sbjct: 39 VH-GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILE 97
Query: 114 --LSPLAKPK---CSDKIFITHCYEFIDLKRTLESQSGFI--ENKVGMIVIDSIAGIF-- 164
LS ++ C ++F+ +C L TL S + + ++++DS++ +
Sbjct: 98 HRLSQSSEEMVKHCLGRLFLVNCNSSTQLLLTLYSLETVVCSHPSLCLLILDSLSAFYWI 157
Query: 165 -RNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTSAMTHSDKNIPALGLTYE 223
R E +Q A ++ A +L +L ++R+V+ T Q T + P+ +
Sbjct: 158 DRVNGGESVNLQEA-TLKKCAQFLEKLVNEYRLVLFATTQSIMQKTSNWTEGPSSAFNHP 216
Query: 224 RAHDMRDLAHYLHEISIKHWIVVI 247
+ D D YL K W V+
Sbjct: 217 KEADA-DYRPYL----CKEWQQVV 235
>UNIPROTKB|Q0U9F0 [details] [associations]
symbol:SNOG_11614 "Putative uncharacterized protein"
species:321614 "Phaeosphaeria nodorum SN15" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709
EMBL:CH445343 RefSeq:XP_001801853.1 ProteinModelPortal:Q0U9F0
EnsemblFungi:SNOT_11614 GeneID:5978761 KEGG:pno:SNOG_11614
Uniprot:Q0U9F0
Length = 353
Score = 96 (38.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 30/115 (26%), Positives = 48/115 (41%)
Query: 94 VLYICTESVFPTARLAQLCELSPLAKPKCSDKIFITHCYEFIDLKRTLESQSGF-IENKV 152
V YI TE F R+AQ+ E + D I L + F + N+
Sbjct: 173 VAYIDTEGTFRPERIAQIAERFGVDPETTQDNITYARAVNSEHQMELLNKVAEFFVGNEY 232
Query: 153 GMIVIDSIAGIFRNTYA-EDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQVTS 206
+++IDSI +FR Y + +R + L ++ + + V+ TNQV S
Sbjct: 233 RLLIIDSIMALFRVDYTGRGELNERQQKLNQFLSKLTHVAEEFNVAVLLTNQVQS 287
Score = 56 (24.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 43 VSTGSEKFDSILKGGIHA 60
+STGS++ D+IL G +HA
Sbjct: 106 ISTGSKQLDTILGGWVHA 123
>UNIPROTKB|E1BX16 [details] [associations]
symbol:XRCC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0043524 GO:GO:0010332
GO:GO:0000724 GO:GO:0010165 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 KO:K10879 CTD:7516 OMA:DTDYHFD
GeneTree:ENSGT00390000020445 EMBL:AADN02000315 EMBL:AADN02000316
IPI:IPI00575623 RefSeq:XP_418543.3 UniGene:Gga.12290
Ensembl:ENSGALT00000010141 GeneID:420438 KEGG:gga:420438
Uniprot:E1BX16
Length = 278
Score = 110 (43.8 bits), Expect = 0.00075, P = 0.00075
Identities = 45/187 (24%), Positives = 85/187 (45%)
Query: 58 IHAGGITELSGASGCGKTQLCLQMCLSLQVSQPHKG----VLYICTESVFPTARLAQLCE 113
+H G + E G G GKT++ + + + G V++I T+ F RL + E
Sbjct: 39 VH-GDVIEFHGPEGTGKTEMLYHLIARCIIPKSGGGLEVEVMFIDTDYHFDMLRLVTILE 97
Query: 114 --LSPLAKP---KCSDKIFITHCYEFIDLKRTLES-QSGFIEN-KVGMIVIDSIAGIF-- 164
L + +C ++F+ +C L TL S ++ F + + ++++DSI+ +
Sbjct: 98 HRLEQSTEEMMKRCLGRLFLVNCNSSTQLLLTLYSLENMFCTHPSLCLLILDSISAFYWI 157
Query: 165 -RNTYAEDKYVQRAHDMRDLAHYLHELSIKHRIVVICTNQ-VTSAMTHSDKNIPALGLTY 222
R+ E Q + ++ A++L +L +H +V+ T Q + T+S + L L
Sbjct: 158 DRSNGGESLNSQEMN-LKKCANFLEKLVREHHLVLFATTQSIMQKSTNSAEGFFPLKLQS 216
Query: 223 ERAHDMR 229
E D R
Sbjct: 217 EIDADYR 223
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 270 0.00097 114 3 11 22 0.44 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 118
No. of states in DFA: 609 (65 KB)
Total size of DFA: 214 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 22.04u 0.07s 22.11t Elapsed: 00:00:07
Total cpu time: 22.06u 0.07s 22.13t Elapsed: 00:00:08
Start: Thu Aug 15 13:48:04 2013 End: Thu Aug 15 13:48:12 2013
WARNINGS ISSUED: 1