BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2199
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U4H5|AMX_DROME TM2 domain-containing protein almondex OS=Drosophila melanogaster
GN=amx PE=2 SV=1
Length = 284
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 137/169 (81%), Gaps = 2/169 (1%)
Query: 11 CSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVCQYCYQTEPWQHTC 70
C L +P IRC+YN C YG V+C V++ V C+GE++F ++ C+YCYQTE WQ +C
Sbjct: 118 CDRLQFPCIRCNYNHGCIYGRDLNVTCEVINNVQCLGERSFQRQMNCRYCYQTEMWQQSC 177
Query: 71 VKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWSTALILSITMGG 130
+++SC+S ++TNCTV +DVLCLG+R F +N+RCNWT GYRWSTAL++S+T+GG
Sbjct: 178 GQRSSCNSATDK--LFRTNCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGG 235
Query: 131 FGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
FGADRFYLGHWQEGIGK+FSFGGLGVWTIIDV+LI++ YLGPADGSLY+
Sbjct: 236 FGADRFYLGHWQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
>sp|Q6DE06|TM2D3_XENLA TM2 domain-containing protein 3 OS=Xenopus laevis GN=tm2d3 PE=2
SV=1
Length = 247
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 124/184 (67%), Gaps = 6/184 (3%)
Query: 1 MEVTHPLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEY----- 55
ME+ P N CS L + C+ N C YG L +CT +GV C E + +EY
Sbjct: 65 MEIC-PSNGQCSRLASDCMTCATNYSCIYGKLVTFNCTAKNGVVCFDENSQRQEYFTISM 123
Query: 56 VCQYCYQTEPWQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGG 115
CQ+C+Q P + C +SC ++ P Y T CTV + V CLG+R F K + CNWTGG
Sbjct: 124 ACQFCWQLPPSDYVCNLSSSCKTISCPRQRYNTTCTVLDHVHCLGNRTFPKMLYCNWTGG 183
Query: 116 YRWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADG 175
Y+WSTAL LSIT+GGFGADRFYLG W+EG+GK+FSFGGLG+WT+IDV LI++ Y+GPADG
Sbjct: 184 YKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVFLISVGYVGPADG 243
Query: 176 SLYL 179
SLY+
Sbjct: 244 SLYI 247
>sp|Q07FZ2|TM2D3_XENTR TM2 domain-containing protein 3 OS=Xenopus tropicalis GN=tm2d3 PE=2
SV=1
Length = 247
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 118/179 (65%), Gaps = 5/179 (2%)
Query: 6 PLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEY-----VCQYC 60
P N CS L + C+ N C YG +CT +GV C + +EY CQ+C
Sbjct: 69 PSNGQCSRLPSDCMTCATNYSCIYGKPVTFNCTAKNGVVCFDVNSQPQEYFTISMTCQFC 128
Query: 61 YQTEPWQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWST 120
+Q P + C +SC +V P Y T CTV + CLG+R F K + CNWTGGY+WST
Sbjct: 129 WQLPPSDYVCNLSSSCKTVSCPRQRYNTTCTVLDHAHCLGNRTFPKMLYCNWTGGYKWST 188
Query: 121 ALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
AL LSIT+GGFGADRFYLG W+EG+GK+FSFGGLG+WT+IDV LI++ Y+GPADGSLY+
Sbjct: 189 ALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVFLISVGYVGPADGSLYI 247
>sp|Q9BRN9|TM2D3_HUMAN TM2 domain-containing protein 3 OS=Homo sapiens GN=TM2D3 PE=2 SV=2
Length = 247
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 117/179 (65%), Gaps = 5/179 (2%)
Query: 6 PLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCI-----GEKTFDKEYVCQYC 60
P N CS L I C+ N CTYG C V V+C+ +K F C++C
Sbjct: 69 PSNGLCSRLPADCIDCTTNFSCTYGKPVTFDCAVKPSVTCVDQDFKSQKNFIINMTCRFC 128
Query: 61 YQTEPWQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWST 120
+Q + C SC +V P Y NCTV++ V CLG+R F K + CNWTGGY+WST
Sbjct: 129 WQLPETDYECTNSTSCMTVSCPRQRYPANCTVRDHVHCLGNRTFPKMLYCNWTGGYKWST 188
Query: 121 ALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
AL LSIT+GGFGADRFYLG W+EG+GK+FSFGGLG+WT+IDV+LI + Y+GPADGSLY+
Sbjct: 189 ALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 247
>sp|Q8BJ83|TM2D3_MOUSE TM2 domain-containing protein 3 OS=Mus musculus GN=Tm2d3 PE=2 SV=1
Length = 261
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 118/179 (65%), Gaps = 5/179 (2%)
Query: 6 PLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGE-----KTFDKEYVCQYC 60
P N CS L I C+ N CTYG CTV V+C+ + + F C++C
Sbjct: 83 PSNGLCSRLPADCIECATNVSCTYGKPVTFDCTVKPSVTCVDQDLKPQRNFVINMTCRFC 142
Query: 61 YQTEPWQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWST 120
+Q + C +C +V P Y NCTV++ + CLG+R F K + CNWTGGY+WST
Sbjct: 143 WQLPETDYECSNSTTCMTVACPRQRYFANCTVRDHIHCLGNRTFPKLLYCNWTGGYKWST 202
Query: 121 ALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
AL LSIT+GGFGADRFYLG W+EG+GK+FSFGGLG+WT+IDV+LI + Y+GPADGSLY+
Sbjct: 203 ALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 261
>sp|A5PLF5|TM2D3_DANRE TM2 domain-containing protein 3 OS=Danio rerio GN=tm2d3 PE=2 SV=2
Length = 244
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 115/174 (66%), Gaps = 5/174 (2%)
Query: 11 CSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIG-----EKTFDKEYVCQYCYQTEP 65
CS+L I C+ + C+YG +C GV C+ ++ F +C++C+Q +
Sbjct: 71 CSKLPADCIICALHHNCSYGRPHNYTCRPRAGVHCVSDQGERQQNFTLSLLCRFCFQLDA 130
Query: 66 WQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWSTALILS 125
Q+ C + C +V P Y +C V V CLG R F K + CNWTGGY+WSTAL LS
Sbjct: 131 SQYRCSNSSDCMTVSCPRRRYNASCEVLEHVHCLGKRVFQKRLFCNWTGGYKWSTALALS 190
Query: 126 ITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
IT+GGFGADRFYLG W+EG+GK+FSFGGLG+WT+IDV+LI + Y+GPADGSLY+
Sbjct: 191 ITLGGFGADRFYLGQWREGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGSLYI 244
>sp|Q95QZ5|TM2D2_CAEEL TM2 domain-containing protein C41D11.9 OS=Caenorhabditis elegans
GN=C41D11.9 PE=3 SV=1
Length = 195
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 3/161 (1%)
Query: 19 IRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVCQYCYQTEPWQHTCVKKASCSS 78
+ C++ C GD KV+CT G + + E VC++C+Q P + C +CS+
Sbjct: 38 LTCTFPGDCRIGDTVKVNCTSRKGCPNPVSRN-NVEAVCRFCWQLLPGDYDCEPATNCST 96
Query: 79 VDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWSTALILSITMGGFGADRFYL 138
S T C+ + V+C+G R F K + CNW+ GY W+ +ILS+ +GGFGADRFYL
Sbjct: 97 --SSTKLLVTKCSAHSSVICMGQRNFYKRIPCNWSSGYSWTKTMILSVVLGGFGADRFYL 154
Query: 139 GHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
G W+ IGK+FSFGGLGVWT++DV+LIA+ Y+ P DGS+Y+
Sbjct: 155 GLWKSAIGKLFSFGGLGVWTLVDVVLIAVGYIKPYDGSMYI 195
>sp|Q9W2H1|TM2D1_DROME TM2 domain-containing protein CG10795 OS=Drosophila melanogaster
GN=CG10795 PE=2 SV=1
Length = 178
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 90 CTVQNDVLCL--GSRRFLKNVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGK 147
C N++ C G+ F + V C WT GY T L+LS+ +G FG DRFYLG+ G+ K
Sbjct: 62 CIAANEINCTETGNATFTREVPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYPGIGLLK 121
Query: 148 VFSFGGLGVWTIIDVILIAIRYLGPADGSLYL 179
+ GG+ + +ID++LIA++ +GPADGS Y+
Sbjct: 122 FCTLGGMFLGQLIDIVLIALQVVGPADGSAYV 153
>sp|Q95PJ8|TM2D3_CAEEL TM2 domain-containing protein Y66D12A.21 OS=Caenorhabditis elegans
GN=Y66D12A.21 PE=3 SV=2
Length = 179
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 60 CYQTEPWQHTCVKKA---------SCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVR- 109
C +P Q+ C A +C++ +S V C + C+G +F R
Sbjct: 22 CDDLDPNQYLCKNYAVDTITQQSVTCAADNSIQVM----CETAEHIKCVGKDQFGIFNRT 77
Query: 110 ----CNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILI 165
C++ ++T ++LSI +G FG DR YLG++ G+ K+FS GGL V+ ++D+ILI
Sbjct: 78 VPSACHYGAHVSYTTTVLLSIFLGFFGIDRIYLGYYALGLIKMFSLGGLFVFWLVDIILI 137
Query: 166 AIRYLGPADGSLY 178
+++ LGPADG+ Y
Sbjct: 138 SLQLLGPADGTAY 150
>sp|Q9VY86|TM2D2_DROME TM2 domain-containing protein CG11103 OS=Drosophila melanogaster
GN=CG11103 PE=2 SV=3
Length = 224
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 90 CTVQNDVLCLGSRRFLK-NVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGKV 148
CTV D+ C G+R FL+ V C + + T LI S+ +G G DRF LG +GK+
Sbjct: 131 CTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKL 190
Query: 149 FSFGGLGVWTIIDVILIAIRYLGPADGS 176
+ GG+GVW IIDVIL+ L P DGS
Sbjct: 191 LTMGGVGVWWIIDVILLITNNLLPEDGS 218
>sp|P61228|TM2D1_CAEEL TM2 domain-containing protein C02F5.13 OS=Caenorhabditis elegans
GN=C02F5.13 PE=1 SV=1
Length = 210
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 67 QHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVRCNWTGGYRWSTALILSI 126
+ C+K + D + C V + C G R F K+ C G+ + T L+ SI
Sbjct: 97 EGKCLKMGGYRAEDVE--FTNVKCRVLPCIECHGPRTFTKSTPCIIYNGHYFLTTLLYSI 154
Query: 127 TMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
+G DRF LG+ +GK+ + GG G+W I+D+ L+ + LGPAD S
Sbjct: 155 FLGVVAVDRFCLGYSAMAVGKLMTLGGFGIWWIVDIFLLVLGVLGPADDS 204
>sp|Q99MB3|TM2D1_MOUSE TM2 domain-containing protein 1 OS=Mus musculus GN=Tm2d1 PE=2 SV=1
Length = 208
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%)
Query: 104 FLKNVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVI 163
FLK + C GY + A+ LS+ +G GADRFYLG+ G+ K + G G+ ++ID I
Sbjct: 108 FLKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIGSLIDFI 167
Query: 164 LIAIRYLGPADGSLYL 179
LI+++ +GP+DGS Y+
Sbjct: 168 LISMQIVGPSDGSSYI 183
>sp|Q5XGR4|TM2D2_XENLA TM2 domain-containing protein 2 OS=Xenopus laevis GN=tm2d2 PE=2
SV=1
Length = 198
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 27/180 (15%)
Query: 3 VTHP-LNMSCS----ELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVC 57
VT+P +N+S + + + P + CSY P+ V C D V +G T +E
Sbjct: 34 VTYPDINVSAAPEPRDPLGPLVLCSYLPE------EFVECD--DPVDHMGNGTAQQEL-- 83
Query: 58 QYCYQTEPWQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLKNVR-CNWTGGY 116
++ C K + D + + C + + C GSR FL+ R C G+
Sbjct: 84 ---------RYGCKKFGGQAYGDVE--HTQVMCRALDGIECDGSRSFLRGNRPCIKYTGH 132
Query: 117 RWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
+ T L+ S +G FG DRF LGH +GK+ ++GGLG+W +D+IL+ L P+D S
Sbjct: 133 YFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTWGGLGIWWFVDLILLITGGLMPSDNS 192
>sp|Q9BX74|TM2D1_HUMAN TM2 domain-containing protein 1 OS=Homo sapiens GN=TM2D1 PE=1 SV=1
Length = 207
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 104 FLKNVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVI 163
F K + C GY + A+ LS+ +G GADRFYLG+ G+ K + G G+ ++ID I
Sbjct: 107 FFKPISCRNVNGYSYKVAVALSLFLGWLGADRFYLGYPALGLLKFCTVGFCGIGSLIDFI 166
Query: 164 LIAIRYLGPADGSLYL 179
LI+++ +GP+DGS Y+
Sbjct: 167 LISMQIVGPSDGSSYI 182
>sp|A5PLH4|TM2D1_DANRE TM2 domain-containing protein 1 OS=Danio rerio GN=tm2d1 PE=2 SV=1
Length = 197
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 104 FLKNVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVI 163
F K + C GY + A+ LS+ +G GADRFYLG+ G+ K + G G+ +++D +
Sbjct: 97 FNKTIPCRNVSGYSYKVAVALSLFLGWIGADRFYLGYPALGLLKFCTVGFCGIGSLVDFM 156
Query: 164 LIAIRYLGPADGSLYL 179
LI+++ +GP+DGS Y+
Sbjct: 157 LISMQIVGPSDGSDYI 172
>sp|Q6DHN3|TM2D2_DANRE TM2 domain-containing protein 2 OS=Danio rerio GN=tm2d2 PE=2 SV=1
Length = 229
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 90 CTVQNDVLCLGSRRFLK-NVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGIGKV 148
CT + + C G R FL+ N C G+ + T L+ S +G FG DRF LGH +GK+
Sbjct: 136 CTALDGIECAGPREFLRGNEPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKL 195
Query: 149 FSFGGLGVWTIIDVILIAIRYLGPADGS 176
+ GGLG+W +D+IL+ L P+D S
Sbjct: 196 LTLGGLGIWWFVDLILLITGGLTPSDSS 223
>sp|Q2TA35|TM2D2_BOVIN TM2 domain-containing protein 2 OS=Bos taurus GN=TM2D2 PE=2 SV=1
Length = 214
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 87 KTNCTVQNDVLCLGSRRFLK-NVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGI 145
+ C + + C R FL+ N C G+ + T L+ S +G FG DRF LGH +
Sbjct: 118 RVQCRALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAV 177
Query: 146 GKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
GK+ + GGLG+W +D+IL+ L P+DGS
Sbjct: 178 GKLLTLGGLGIWWFVDLILLITGGLMPSDGS 208
>sp|Q566R2|TM2D2_RAT TM2 domain-containing protein 2 OS=Rattus norvegicus GN=Tm2d2 PE=2
SV=1
Length = 213
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 87 KTNCTVQNDVLCLGSRRFL-KNVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQEGI 145
C + C R FL KN C G+ + T L+ S +G FG DRF LGH +
Sbjct: 117 AVQCRALEGIECASPRTFLRKNKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAV 176
Query: 146 GKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
GK+ + GGLG+W +D+IL+ L P+DGS
Sbjct: 177 GKLLTLGGLGIWWFVDLILLITGGLMPSDGS 207
>sp|Q5M8E3|TM2D2_XENTR TM2 domain-containing protein 2 OS=Xenopus tropicalis GN=tm2d2 PE=2
SV=1
Length = 198
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 3 VTHP-LNMSCS----ELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVC 57
VT+P LN+S + + + P + CSY P+ V C D V +G T +E
Sbjct: 34 VTYPDLNLSAAPEPRDPLGPLVLCSYLPE------EFVECD--DPVDHMGNGTAQQEL-- 83
Query: 58 QYCYQTEPWQHTCVKKASCSSVDSPPVYYKTNCTVQNDVLCLGSRRFLK-NVRCNWTGGY 116
++ C K + D + + C + + C G R FL+ N C G+
Sbjct: 84 ---------RYGCKKFGGQAYGDV--EHTQVMCRALDGIECDGPRSFLRGNKPCIKYTGH 132
Query: 117 RWSTALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
+ T L+ S +G FG DRF LGH +GK+ + GGLG+W +D+IL+ L P+D S
Sbjct: 133 YFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDNS 192
>sp|Q9BX73|TM2D2_HUMAN TM2 domain-containing protein 2 OS=Homo sapiens GN=TM2D2 PE=2 SV=1
Length = 214
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 85 YYKTNCTVQNDVLCLGSRRFLK-NVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQE 143
+ C + + C R FL+ N C G+ + T L+ S +G FG DRF LGH
Sbjct: 116 HTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGT 175
Query: 144 GIGKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
+GK+ + GGLG+W +D+IL+ L P+DGS
Sbjct: 176 AVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 208
>sp|Q8R0I4|TM2D2_MOUSE TM2 domain-containing protein 2 OS=Mus musculus GN=Tm2d2 PE=2 SV=1
Length = 213
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 85 YYKTNCTVQNDVLCLGSRRFLK-NVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQE 143
+ C + C R FL+ N C G+ + T L+ S +G FG DRF LGH
Sbjct: 115 HTAVQCRALEGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGT 174
Query: 144 GIGKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
+GK+ + GGLG+W +D+IL+ L P+DGS
Sbjct: 175 AVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 207
>sp|Q5RCC0|TM2D2_PONAB TM2 domain-containing protein 2 OS=Pongo abelii GN=TM2D2 PE=2 SV=1
Length = 214
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 85 YYKTNCTVQNDVLCLGSRRFLK-NVRCNWTGGYRWSTALILSITMGGFGADRFYLGHWQE 143
+ C + C R FL+ N C G+ + T L+ S +G FG DRF LGH
Sbjct: 116 HTSVQCHALAGIECASPRTFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGT 175
Query: 144 GIGKVFSFGGLGVWTIIDVILIAIRYLGPADGS 176
+GK+ + GGLG+W +D+IL+ L P+DGS
Sbjct: 176 AVGKLLTLGGLGIWWFVDLILLITGGLMPSDGS 208
>sp|A7ETJ6|ATP23_SCLS1 Mitochondrial inner membrane protease atp23 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atp23
PE=3 SV=1
Length = 244
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 2 EVTHPLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVCQYCY 61
+ H + E+V+ W + K +GDL +C+ + S GE + +E+ + Y
Sbjct: 134 DSKHVEDTLAHEMVHAWDHLRW--KVDWGDLRHAACSEIRAASLSGECRWTREFWTRNNY 191
Query: 62 QTEPWQHTCVKKASCSSVDSPP 83
+ CV++ + SV + P
Sbjct: 192 RVTQQHQECVRRRAVKSVLARP 213
>sp|A6SSS5|ATP23_BOTFB Mitochondrial inner membrane protease atp23 OS=Botryotinia
fuckeliana (strain B05.10) GN=atp23 PE=3 SV=2
Length = 244
Score = 33.9 bits (76), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 2 EVTHPLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVCQYCY 61
+ H + E+V+ W + K +GDL +C+ + S GE + +E+ + Y
Sbjct: 134 DSKHVEDTLAHEMVHAWDHLRW--KVDWGDLRHAACSEIRAASLSGECRWAREFWTRNNY 191
Query: 62 QTEPWQHTCVKKASCSSVDSPP 83
+ CV++ + SV + P
Sbjct: 192 RVTQQHQDCVRRRAVKSVLARP 213
>sp|Q5NB82|NLP3_ORYSJ Protein NLP3 OS=Oryza sativa subsp. japonica GN=NLP3 PE=3 SV=1
Length = 938
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 1 MEVTHPLNMSCSELVYP----WIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYV 56
+E+ L + C E P W+ C Y +G K SC DG SC+GE V
Sbjct: 315 VEILEILTVVCEEHKLPLAQTWVPCKYRSVLAHGGGVKKSCLSFDG-SCMGEVCMSTSDV 373
Query: 57 CQYCYQTEPW--QHTCVK 72
+ W + CV+
Sbjct: 374 AFHVIDAHMWGFRDACVE 391
>sp|Q54KZ0|TM2D3_DICDI TM2 domain-containing protein DDB_G0287015 OS=Dictyostelium
discoideum GN=DDB_G0287015 PE=3 SV=1
Length = 137
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 120 TALILSITMGGFGADRFYLGHWQEGIGKVFSFGGLGVWTIIDVILI 165
A +L I +G FG RFY+G G+ + + G G+ I+D L+
Sbjct: 14 VAYLLLIFLGFFGVHRFYVGRTISGVVYLLTGGIFGIGYIVDFFLL 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,983,261
Number of Sequences: 539616
Number of extensions: 3022528
Number of successful extensions: 6165
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6107
Number of HSP's gapped (non-prelim): 39
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (26.6 bits)