Query psy2199
Match_columns 179
No_of_seqs 172 out of 881
Neff 4.3
Searched_HMMs 13730
Date Fri Aug 16 18:45:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2199.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2199hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d0gr1 g.24.1.1 (R:21-61) Dea 60.0 1.6 0.00012 25.9 1.2 22 2-23 5-26 (41)
2 d1g26a_ g.3.16.1 (A:) N-termin 59.0 0.77 5.6E-05 26.2 -0.4 16 1-16 6-21 (31)
3 d1skza2 g.3.15.1 (A:59-110) Fa 22.9 15 0.0011 22.3 1.3 44 3-62 7-50 (52)
4 d2e74f1 f.23.25.1 (F:1-32) Pet 15.4 23 0.0017 19.6 0.8 19 148-166 10-28 (32)
5 d1d0gr3 g.24.1.1 (R:102-128) D 11.9 42 0.003 17.9 1.1 19 81-99 6-25 (27)
6 d1mmca_ g.3.1.2 (A:) Antimicro 11.9 39 0.0028 18.4 1.0 13 3-15 7-19 (30)
7 d3btaa2 b.42.4.2 (A:1079-1295) 10.1 20 0.0015 28.0 -0.9 22 128-149 168-189 (217)
8 d1oiga_ g.3.18.1 (A:) Dumpy {F 9.5 41 0.003 17.8 0.5 11 3-13 8-18 (26)
9 d1epwa2 b.42.4.2 (A:1080-1290) 9.4 35 0.0025 26.5 0.3 13 127-139 154-166 (211)
10 d1quba4 g.18.1.1 (A:184-243) b 9.2 86 0.0063 18.0 2.1 20 20-39 15-34 (60)
No 1
>d1d0gr1 g.24.1.1 (R:21-61) Death receptor-5 (dr5) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.99 E-value=1.6 Score=25.89 Aligned_cols=22 Identities=32% Similarity=0.289 Sum_probs=19.4
Q ss_pred cccCCCCCCcccCCCCceeccC
Q psy2199 2 EVTHPLNMSCSELVYPWIRCSY 23 (179)
Q Consensus 2 ~~~cp~~~~Cs~l~~~c~~c~~ 23 (179)
|-+||.+..=|+-.-+|++|+|
T Consensus 5 eglcppghhised~r~ciscky 26 (41)
T d1d0gr1 5 EGLCPPGHHISEDGRDCISCKY 26 (41)
T ss_dssp TTBBCTTEEECSSSSCEEECCT
T ss_pred CccCCCCcccccccceeeEecc
Confidence 6789999999999999998775
No 2
>d1g26a_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.99 E-value=0.77 Score=26.19 Aligned_cols=16 Identities=38% Similarity=0.563 Sum_probs=14.3
Q ss_pred CcccCCCCCCcccCCC
Q psy2199 1 MEVTHPLNMSCSELVY 16 (179)
Q Consensus 1 ~~~~cp~~~~Cs~l~~ 16 (179)
||++||.+..|-+|+.
T Consensus 6 ~e~sCPdg~TCCrl~s 21 (31)
T d1g26a_ 6 MEVICPDGYTCCRLPS 21 (31)
T ss_dssp TTEEECTTEEEEECTT
T ss_pred cEEecCCCCeeEeccC
Confidence 7999999999988875
No 3
>d1skza2 g.3.15.1 (A:59-110) Factor Xa inhibitor antistasin {Mexican leech (Haementeria officinalis) [TaxId: 6410]}
Probab=22.87 E-value=15 Score=22.32 Aligned_cols=44 Identities=25% Similarity=0.543 Sum_probs=28.2
Q ss_pred ccCCCCCCcccCCCCceeccCCCCcccCCceEEEEEecCCcccCCCCeeeeecceeeeee
Q psy2199 3 VTHPLNMSCSELVYPWIRCSYNPKCTYGDLTKVSCTVVDGVSCIGEKTFDKEYVCQYCYQ 62 (179)
Q Consensus 3 ~~cp~~~~Cs~l~~~c~~c~~~~~C~yg~~~~~~C~~~~~v~C~g~~~~~~~~~CryC~q 62 (179)
..||.++-||+|...| .|...-+|+- .|.. .-.....+|.||--
T Consensus 7 secpegmmcsrltnkc-dckidincrk--------------tcpn-glkrdklgceycec 50 (52)
T d1skza2 7 SECPEGMMCSRLTNKC-DCKIDINCRK--------------TCPN-GLKRDKLGCEYCEC 50 (52)
T ss_dssp GGSCTTEECCTTTSSS-CEESCCCCCC--------------CCSS-CEEECTTSCEEEEE
T ss_pred ccCccccchhhhcccc-CceEeccccc--------------cCCC-cccccccCceeeec
Confidence 4699999999999988 4555444431 3433 22234678888853
No 4
>d2e74f1 f.23.25.1 (F:1-32) PetM subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=15.40 E-value=23 Score=19.65 Aligned_cols=19 Identities=32% Similarity=0.347 Sum_probs=12.8
Q ss_pred Hhhhcccchhhhhhhhhhh
Q psy2199 148 VFSFGGLGVWTIIDVILIA 166 (179)
Q Consensus 148 L~t~Gg~gIw~liD~ilI~ 166 (179)
+++||..+++|-+...++-
T Consensus 10 ~lsfglifvgwglgalllk 28 (32)
T d2e74f1 10 LLSFGLIFVGWGLGVLLLK 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhHHHHHHhh
Confidence 4567777777777666554
No 5
>d1d0gr3 g.24.1.1 (R:102-128) Death receptor-5 (dr5) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.94 E-value=42 Score=17.92 Aligned_cols=19 Identities=32% Similarity=0.637 Sum_probs=13.4
Q ss_pred CCCceeeE-EEEEcCCeeee
Q psy2199 81 SPPVYYKT-NCTVQNDVLCL 99 (179)
Q Consensus 81 ~~~~~~~v-~C~v~~~i~C~ 99 (179)
+|+...+| +|++-.+|+|.
T Consensus 6 cprg~vkv~dctpwsdi~cv 25 (27)
T d1d0gr3 6 CPRGMVKVGDCTPWSDIECV 25 (27)
T ss_dssp CCTTCEEEECCBTTBCCEEE
T ss_pred CCCcceEeccCcccccceee
Confidence 35555554 79998899985
No 6
>d1mmca_ g.3.1.2 (A:) Antimicrobial peptide 2, AC-AMP2 {Tassel (Amaranthus caudatus) [TaxId: 3567]}
Probab=11.86 E-value=39 Score=18.35 Aligned_cols=13 Identities=31% Similarity=0.503 Sum_probs=10.6
Q ss_pred ccCCCCCCcccCC
Q psy2199 3 VTHPLNMSCSELV 15 (179)
Q Consensus 3 ~~cp~~~~Cs~l~ 15 (179)
-.|||++-||+..
T Consensus 7 grcpsgmccsqfg 19 (30)
T d1mmca_ 7 GRCPSGMCCSQFG 19 (30)
T ss_dssp SCCSTTCEECTTS
T ss_pred ccCCCcchhhhcC
Confidence 4699999999864
No 7
>d3btaa2 b.42.4.2 (A:1079-1295) Botulinum neurotoxin {Clostridium botulinum, serotype A [TaxId: 1491]}
Probab=10.06 E-value=20 Score=28.01 Aligned_cols=22 Identities=14% Similarity=-0.106 Sum_probs=16.3
Q ss_pred hcCcceeeEEeCCchhhhHHHh
Q psy2199 128 MGGFGADRFYLGHWQEGIGKVF 149 (179)
Q Consensus 128 lG~fG~hRFYLG~~~~Gi~~L~ 149 (179)
+|.+|+|||+.+....+.-+.+
T Consensus 168 igLiG~h~f~n~~~~vas~wY~ 189 (217)
T d3btaa2 168 IGFIGFHQFNNIAKLVASNWYN 189 (217)
T ss_dssp CEEEEEECSSSCCEEEEEHHHH
T ss_pred EEEEEEEEeccCCCEEEEehhh
Confidence 7999999999988654444443
No 8
>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=9.49 E-value=41 Score=17.75 Aligned_cols=11 Identities=27% Similarity=0.561 Sum_probs=8.1
Q ss_pred ccCCCCCCccc
Q psy2199 3 VTHPLNMSCSE 13 (179)
Q Consensus 3 ~~cp~~~~Cs~ 13 (179)
..||||..|-+
T Consensus 8 sdcpsn~acvn 18 (26)
T d1oiga_ 8 SDCPSNQACVN 18 (26)
T ss_dssp TTSSTTCEECS
T ss_pred CCCCccHhHhc
Confidence 46888888754
No 9
>d1epwa2 b.42.4.2 (A:1080-1290) Botulinum neurotoxin {Clostridium botulinum, serotype B [TaxId: 1491]}
Probab=9.38 E-value=35 Score=26.48 Aligned_cols=13 Identities=38% Similarity=0.741 Sum_probs=10.6
Q ss_pred HhcCcceeeEEeC
Q psy2199 127 TMGGFGADRFYLG 139 (179)
Q Consensus 127 flG~fG~hRFYLG 139 (179)
-+|.+|+|+|+-.
T Consensus 154 ~iGlig~h~~~~~ 166 (211)
T d1epwa2 154 EIGLIGIHRFYES 166 (211)
T ss_dssp EEEEEEEEEEEEE
T ss_pred eEEEEEeeeeccc
Confidence 4799999998655
No 10
>d1quba4 g.18.1.1 (A:184-243) beta2-glycoprotein I {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.21 E-value=86 Score=17.96 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=13.6
Q ss_pred eccCCCCcccCCceEEEEEe
Q psy2199 20 RCSYNPKCTYGDLTKVSCTV 39 (179)
Q Consensus 20 ~c~~~~~C~yg~~~~~~C~~ 39 (179)
.+.-..+=.||+.++++|..
T Consensus 15 ~~~~~~~~~~g~~~~y~C~~ 34 (60)
T d1quba4 15 NYPAKPTLYYKDKATFGCHD 34 (60)
T ss_dssp ECCSCSSEETTCEEEEEECT
T ss_pred EcCCCCcccCCCEEEEECCC
Confidence 44444444689999999964
Done!