RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2201
         (255 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 34.6 bits (78), Expect = 0.008
 Identities = 14/102 (13%), Positives = 31/102 (30%)

Query: 85  NIVGTVAHEFSHQWFGDLLTPYKWDYTWLKESFATFFGCFYSMDVVSWEWCLTRECVQRR 144
           ++   +AH+ SH W G+L+T   WD+ WL E    +        +   ++          
Sbjct: 80  SLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWG 139

Query: 145 VLELHIDRGRHKRENKHFCLRFSKRTYTTMPWTAVSTTPHIV 186
            L+  +             +  +         +        +
Sbjct: 140 ELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFAL 181



 Score = 32.7 bits (73), Expect = 0.034
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 1   EVYLFLDPSRTKKTRIDDVVSTVTHEFSHQWFGDLVTPATWNSAWLNEAFATFFEYAGTH 60
           E       + T       + + + H+ SH W G+LVT  TW+  WLNE    + E     
Sbjct: 63  ENPCLTFVTPTLLAGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICG 122

Query: 61  WVRRE 65
            +  E
Sbjct: 123 RLFGE 127


>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase,
           C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
          Length = 255

 Score = 27.6 bits (61), Expect = 1.4
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 54  FEYAGTHWVRRESAEACL--FSIPSEVKAAQTLNI--VGTVAHEF--SHQWFGDLLTPYK 107
           F Y     V     E     F   S V  A+ L++  +GT+AHE+  +HQ  G  L   +
Sbjct: 40  FSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMAHQQLGPRLIDSQ 99

Query: 108 WD 109
             
Sbjct: 100 SA 101


>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase,
           C-terminal domain {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 266

 Score = 25.4 bits (55), Expect = 7.0
 Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%)

Query: 76  SEVKAAQTLNI--VGTVAHEFSHQWFGDLLTPYK 107
           S +  A+   +  +GTVAHE+       +   Y 
Sbjct: 65  SNILFAKKYGVKPIGTVAHEWV-MGVASISEDYL 97


>d1kgsa1 a.4.6.1 (A:124-225) PhoB {Thermotoga maritima [TaxId:
           2336]}
          Length = 102

 Score = 24.3 bits (52), Expect = 9.5
 Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 3/54 (5%)

Query: 103 LTPYKWDYTWLKESFATFFGCFYSMDVVSWEWCLTRECVQRRVLELHIDRGRHK 156
           LT  ++                 + + +        + V   VL  HI   R K
Sbjct: 29  LTKKEYQILE---YLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKK 79


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.134    0.448 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,004,891
Number of extensions: 45911
Number of successful extensions: 136
Number of sequences better than 10.0: 1
Number of HSP's gapped: 136
Number of HSP's successfully gapped: 6
Length of query: 255
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 172
Effective length of database: 1,268,006
Effective search space: 218097032
Effective search space used: 218097032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)