BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2203
(74 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157132061|ref|XP_001662443.1| splicing factor u2af large subunit [Aedes aegypti]
gi|108881728|gb|EAT45953.1| AAEL002818-PA [Aedes aegypti]
Length = 418
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCG
Sbjct: 317 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCG 374
Query: 70 K 70
K
Sbjct: 375 K 375
>gi|328721670|ref|XP_001951521.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Acyrthosiphon pisum]
Length = 416
Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRSLEIPRPIE +DVPGCG
Sbjct: 315 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSLEIPRPIEGIDVPGCG 372
Query: 70 K 70
K
Sbjct: 373 K 373
>gi|193629757|ref|XP_001950852.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Acyrthosiphon
pisum]
Length = 446
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRSLEIPRPIE +DVPGCG
Sbjct: 345 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSLEIPRPIEGIDVPGCG 402
Query: 70 K 70
K
Sbjct: 403 K 403
>gi|328721668|ref|XP_003247369.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Acyrthosiphon pisum]
Length = 451
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRSLEIPRPIE +DVPGCG
Sbjct: 350 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSLEIPRPIEGIDVPGCG 407
Query: 70 K 70
K
Sbjct: 408 K 408
>gi|170054347|ref|XP_001863087.1| splicing factor u2af large subunit [Culex quinquefasciatus]
gi|167874693|gb|EDS38076.1| splicing factor u2af large subunit [Culex quinquefasciatus]
Length = 438
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDIKEECNKYG+VRS EIPRPIE VDVPGCG
Sbjct: 337 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSAEIPRPIEGVDVPGCG 394
Query: 70 K 70
K
Sbjct: 395 K 395
>gi|347968827|ref|XP_311994.4| AGAP002908-PA [Anopheles gambiae str. PEST]
gi|333467820|gb|EAA08228.4| AGAP002908-PA [Anopheles gambiae str. PEST]
Length = 446
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRS+EIPRPIE VDVPGCG
Sbjct: 345 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIEGVDVPGCG 402
Query: 70 K 70
K
Sbjct: 403 K 403
>gi|289741197|gb|ADD19346.1| splicing factor U2AF large subunit [Glossina morsitans morsitans]
Length = 423
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCG
Sbjct: 322 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCG 379
Query: 70 K 70
K
Sbjct: 380 K 380
>gi|347968829|ref|XP_003436304.1| AGAP002908-PC [Anopheles gambiae str. PEST]
gi|333467822|gb|EGK96709.1| AGAP002908-PC [Anopheles gambiae str. PEST]
Length = 250
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRS+EIPRPIE VDVPGCG
Sbjct: 149 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIEGVDVPGCG 206
Query: 70 K 70
K
Sbjct: 207 K 207
>gi|357623461|gb|EHJ74600.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Danaus
plexippus]
Length = 350
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTPDEL+DE+EYEDI EDIKEECNKYG VRS+EIPRPIE V+VPGCGK
Sbjct: 253 VLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGCVRSIEIPRPIEGVEVPGCGK 307
>gi|114052735|ref|NP_001040494.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 [Bombyx mori]
gi|95103122|gb|ABF51502.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Bombyx mori]
Length = 417
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEECNKYG+VRS+EIPRPIE V+VPGCG
Sbjct: 316 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGVVRSIEIPRPIEGVEVPGCG 373
Query: 70 K 70
K
Sbjct: 374 K 374
>gi|389610875|dbj|BAM19048.1| U2 small nuclear riboprotein auxiliary factor 50 [Papilio polytes]
Length = 422
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/55 (87%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTPDEL+DE+EYEDI EDIKEECNKYG VRS+EIPRP+E VDVPGCGK
Sbjct: 325 VLCLLNMVTPDELRDEEEYEDILEDIKEECNKYGCVRSIEIPRPLEGVDVPGCGK 379
>gi|270011684|gb|EFA08132.1| hypothetical protein TcasGA2_TC005736 [Tribolium castaneum]
Length = 432
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDIKEECNKYG+VRS+EIPRPI+ V+VPGCG
Sbjct: 331 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSIEIPRPIDGVEVPGCG 388
Query: 70 K 70
K
Sbjct: 389 K 389
>gi|312372039|gb|EFR20089.1| hypothetical protein AND_20681 [Anopheles darlingi]
Length = 384
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRS+EIPRPIE VDVPGCG
Sbjct: 283 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIEGVDVPGCG 340
Query: 70 K 70
K
Sbjct: 341 K 341
>gi|91088649|ref|XP_974465.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor 2 [Tribolium castaneum]
Length = 450
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDELKDE+EYEDI EDIKEECNKYG+VRS+EIPRPI+ V+VPGCG
Sbjct: 349 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSIEIPRPIDGVEVPGCG 406
Query: 70 K 70
K
Sbjct: 407 K 407
>gi|386764550|ref|NP_001245709.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
gi|383293439|gb|AFH07422.1| U2 small nuclear riboprotein auxiliary factor 50, isoform C
[Drosophila melanogaster]
Length = 360
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 259 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 316
Query: 70 K 70
K
Sbjct: 317 K 317
>gi|195393580|ref|XP_002055432.1| GJ19364 [Drosophila virilis]
gi|194149942|gb|EDW65633.1| GJ19364 [Drosophila virilis]
Length = 476
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 375 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 432
Query: 70 K 70
K
Sbjct: 433 K 433
>gi|195167317|ref|XP_002024480.1| GL15893 [Drosophila persimilis]
gi|198469588|ref|XP_001355063.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
gi|194107878|gb|EDW29921.1| GL15893 [Drosophila persimilis]
gi|198146942|gb|EAL32119.2| GA22177 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 317 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 374
Query: 70 K 70
K
Sbjct: 375 K 375
>gi|195448282|ref|XP_002071589.1| GK10063 [Drosophila willistoni]
gi|194167674|gb|EDW82575.1| GK10063 [Drosophila willistoni]
Length = 416
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 315 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 70 K 70
K
Sbjct: 373 K 373
>gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|386764552|ref|NP_001245710.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
gi|195351420|ref|XP_002042232.1| GM13406 [Drosophila sechellia]
gi|195479195|ref|XP_002100800.1| GE15975 [Drosophila yakuba]
gi|195555160|ref|XP_002077042.1| GD24494 [Drosophila simulans]
gi|4033485|sp|Q24562.1|U2AF2_DROME RecName: Full=Splicing factor U2AF 50 kDa subunit; AltName: Full=U2
auxiliary factor 50 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|349761|gb|AAA03548.1| RNA binding protein [Drosophila melanogaster]
gi|7293214|gb|AAF48596.1| U2 small nuclear riboprotein auxiliary factor 50, isoform A
[Drosophila melanogaster]
gi|17861976|gb|AAL39465.1| LD03714p [Drosophila melanogaster]
gi|194124075|gb|EDW46118.1| GM13406 [Drosophila sechellia]
gi|194188324|gb|EDX01908.1| GE15975 [Drosophila yakuba]
gi|194203060|gb|EDX16636.1| GD24494 [Drosophila simulans]
gi|220943258|gb|ACL84172.1| U2af50-PA [synthetic construct]
gi|220953438|gb|ACL89262.1| U2af50-PA [synthetic construct]
gi|383293440|gb|AFH07423.1| U2 small nuclear riboprotein auxiliary factor 50, isoform D
[Drosophila melanogaster]
Length = 416
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 315 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 70 K 70
K
Sbjct: 373 K 373
>gi|194893848|ref|XP_001977952.1| GG19328 [Drosophila erecta]
gi|190649601|gb|EDV46879.1| GG19328 [Drosophila erecta]
Length = 416
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 315 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 70 K 70
K
Sbjct: 373 K 373
>gi|194770152|ref|XP_001967161.1| GF19596 [Drosophila ananassae]
gi|190619281|gb|EDV34805.1| GF19596 [Drosophila ananassae]
Length = 416
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 315 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 70 K 70
K
Sbjct: 373 K 373
>gi|195042782|ref|XP_001991497.1| GH12033 [Drosophila grimshawi]
gi|195134983|ref|XP_002011915.1| GI14308 [Drosophila mojavensis]
gi|193901255|gb|EDW00122.1| GH12033 [Drosophila grimshawi]
gi|193909169|gb|EDW08036.1| GI14308 [Drosophila mojavensis]
Length = 416
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 315 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 372
Query: 70 K 70
K
Sbjct: 373 K 373
>gi|386764548|ref|NP_001245708.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
gi|383293438|gb|AFH07421.1| U2 small nuclear riboprotein auxiliary factor 50, isoform B
[Drosophila melanogaster]
Length = 427
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTPDEL+DE+EYEDI EDIKEEC KYG+VRS+EIPRPIE V+VPGCG
Sbjct: 326 PPTE--VLCLLNMVTPDELRDEEEYEDILEDIKEECTKYGVVRSVEIPRPIEGVEVPGCG 383
Query: 70 K 70
K
Sbjct: 384 K 384
>gi|347968831|ref|XP_003436305.1| AGAP002908-PB [Anopheles gambiae str. PEST]
gi|333467821|gb|EGK96708.1| AGAP002908-PB [Anopheles gambiae str. PEST]
Length = 144
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 53/55 (96%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTPDELKDE+EYEDI EDI+EECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 47 VLCLLNMVTPDELKDEEEYEDILEDIREECNKYGVVRSVEIPRPIEGVDVPGCGK 101
>gi|242019185|ref|XP_002430045.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
gi|212515110|gb|EEB17307.1| Splicing factor U2AF 50 kDa subunit, putative [Pediculus humanus
corporis]
Length = 445
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/61 (78%), Positives = 52/61 (85%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTP EL DE+EYEDI EDIKEECNK+G+V+SLEIPRPI VDVPGCG
Sbjct: 344 PPTE--VLCLLNMVTPSELNDEEEYEDILEDIKEECNKHGVVKSLEIPRPILGVDVPGCG 401
Query: 70 K 70
K
Sbjct: 402 K 402
>gi|390341852|ref|XP_792919.3| PREDICTED: splicing factor U2AF 50 kDa subunit-like
[Strongylocentrotus purpuratus]
Length = 386
Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/55 (76%), Positives = 50/55 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVTP+ELKD++EY+DI ED+KEEC KYG VRSLEIPRPI +DVPGCGK
Sbjct: 289 ILCLMNMVTPEELKDDEEYDDIVEDVKEECQKYGQVRSLEIPRPIPGLDVPGCGK 343
>gi|391337926|ref|XP_003743315.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Metaseiulus
occidentalis]
Length = 430
Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+N+VTPDEL+DE+EY+DI EDI++ECNKYG V+S+EIPRPI+ VDVPG GK
Sbjct: 333 VLCLMNLVTPDELRDEEEYDDILEDIQDECNKYGHVKSIEIPRPIQGVDVPGVGK 387
>gi|410903109|ref|XP_003965036.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 4
[Takifugu rubripes]
Length = 455
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+D+YE+I ED++EEC KYG VRS+EIPRP++ VDVPGCGK
Sbjct: 358 VLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIEIPRPVDGVDVPGCGK 412
>gi|410903103|ref|XP_003965033.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Takifugu rubripes]
Length = 446
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+D+YE+I ED++EEC KYG VRS+EIPRP++ VDVPGCGK
Sbjct: 349 VLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIEIPRPVDGVDVPGCGK 403
>gi|410903107|ref|XP_003965035.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Takifugu rubripes]
Length = 461
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+D+YE+I ED++EEC KYG VRS+EIPRP++ VDVPGCGK
Sbjct: 364 VLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIEIPRPVDGVDVPGCGK 418
>gi|410903105|ref|XP_003965034.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Takifugu rubripes]
Length = 454
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 40/55 (72%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+D+YE+I ED++EEC KYG VRS+EIPRP++ VDVPGCGK
Sbjct: 357 VLCLLNMVMPEELVDDDDYEEILEDVREECCKYGSVRSIEIPRPVDGVDVPGCGK 411
>gi|348510221|ref|XP_003442644.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 467
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+++YE+I EDI+EEC KYG VRS+EIPRP++ V+VPGCGK
Sbjct: 370 VLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIEIPRPVDGVEVPGCGK 424
>gi|348510219|ref|XP_003442643.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 466
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+++YE+I EDI+EEC KYG VRS+EIPRP++ V+VPGCGK
Sbjct: 369 VLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIEIPRPVDGVEVPGCGK 423
>gi|348510223|ref|XP_003442645.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 467
Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+++YE+I EDI+EEC KYG VRS+EIPRP++ V+VPGCGK
Sbjct: 370 VLCLLNMVMPEELVDDEDYEEILEDIREECCKYGTVRSIEIPRPVDGVEVPGCGK 424
>gi|321479007|gb|EFX89963.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 1
[Daphnia pulex]
Length = 487
Score = 91.3 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV-DVPGCGK 70
VLCLLNMVTP+EL+D++EYE+I +DI+EECN++G VRS+EIPRP+E V DVPG GK
Sbjct: 389 VLCLLNMVTPEELRDDEEYEEIVDDIREECNRHGAVRSVEIPRPLEGVDDVPGVGK 444
>gi|147902896|ref|NP_001080595.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus laevis]
gi|111185517|gb|AAH44032.2| U2af2 protein [Xenopus laevis]
Length = 456
Score = 90.9 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D+DEYE+I ED+++EC KYG V+S+EIPRP++ V+VPGCGK
Sbjct: 358 VLCLMNMVVPEELIDDDEYEEIVEDVRDECGKYGAVKSIEIPRPVDGVEVPGCGK 412
>gi|62859443|ref|NP_001016998.1| U2 small nuclear RNA auxiliary factor 2 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|89269799|emb|CAJ83531.1| U2 (RNU2) small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
gi|115292148|gb|AAI22001.1| U2 small nuclear RNA auxiliary factor 2 [Xenopus (Silurana)
tropicalis]
Length = 465
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D+DEYE+I ED+++EC KYG V+S+EIPRP++ V+VPGCGK
Sbjct: 367 VLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYGAVKSIEIPRPVDGVEVPGCGK 421
>gi|47575746|ref|NP_001001217.1| U2 small nuclear RNA auxiliary factor 2 isoform 2 [Xenopus
(Silurana) tropicalis]
gi|45709722|gb|AAH67966.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
[Xenopus (Silurana) tropicalis]
Length = 456
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D+DEYE+I ED+++EC KYG V+S+EIPRP++ V+VPGCGK
Sbjct: 358 VLCLMNMVLPEELLDDDEYEEIVEDVRDECGKYGAVKSIEIPRPVDGVEVPGCGK 412
>gi|322792032|gb|EFZ16137.1| hypothetical protein SINV_12499 [Solenopsis invicta]
Length = 344
Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 247 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 301
>gi|332026432|gb|EGI66560.1| Splicing factor U2AF 50 kDa subunit [Acromyrmex echinatior]
Length = 435
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 338 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 392
>gi|47217926|emb|CAG02209.1| unnamed protein product [Tetraodon nigroviridis]
Length = 600
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P+EL D+++YE+I ED++EEC KYG VRS+EIPRP++ V+VPGCGK
Sbjct: 503 VLCLLNMVVPEELVDDEDYEEILEDVREECCKYGGVRSIEIPRPVDGVEVPGCGK 557
>gi|393909510|gb|EJD75480.1| hypothetical protein LOAG_17389 [Loa loa]
Length = 502
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NMVT DELKD++EYEDI EDI+EEC KYGIV+SLEIPR + VDV G G
Sbjct: 401 PPTE--VLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVG 458
Query: 70 K 70
K
Sbjct: 459 K 459
>gi|380016747|ref|XP_003692335.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Apis florea]
Length = 428
Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 331 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 385
>gi|307195151|gb|EFN77144.1| Splicing factor U2AF 50 kDa subunit [Harpegnathos saltator]
Length = 402
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 305 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 359
>gi|402590758|gb|EJW84688.1| hypothetical protein WUBG_04401 [Wuchereria bancrofti]
Length = 477
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NMVT DELKD++EYEDI EDI+EEC KYGIV+SLEIPR + VDV G G
Sbjct: 376 PPTE--VLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVG 433
Query: 70 K 70
K
Sbjct: 434 K 434
>gi|350417886|ref|XP_003491628.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 2
[Bombus impatiens]
Length = 428
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 331 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 385
>gi|66520699|ref|XP_623055.1| PREDICTED: splicing factor U2AF 50 kDa subunit [Apis mellifera]
Length = 432
Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 335 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 389
>gi|170575889|ref|XP_001893425.1| U2 auxiliary factor 65 kDa subunit [Brugia malayi]
gi|158600599|gb|EDP37742.1| U2 auxiliary factor 65 kDa subunit, putative [Brugia malayi]
Length = 502
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/61 (70%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NMVT DELKD++EYEDI EDI+EEC KYGIV+SLEIPR + VDV G G
Sbjct: 401 PPTE--VLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVG 458
Query: 70 K 70
K
Sbjct: 459 K 459
>gi|307176032|gb|EFN65791.1| Splicing factor U2AF 50 kDa subunit [Camponotus floridanus]
Length = 432
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 335 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 389
>gi|383854116|ref|XP_003702568.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Megachile
rotundata]
Length = 432
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 335 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 389
>gi|340715832|ref|XP_003396412.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Bombus
terrestris]
gi|350417884|ref|XP_003491627.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like isoform 1
[Bombus impatiens]
Length = 432
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/55 (85%), Positives = 52/55 (94%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCGK
Sbjct: 335 VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCGK 389
>gi|345480698|ref|XP_001604333.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Nasonia
vitripennis]
Length = 455
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 49/61 (80%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCLLNMVTP+EL +E+EYEDI EDIKEECNKYG+VRS+EIPRPIE VDVPGCG
Sbjct: 354 PPTE--VLCLLNMVTPEELMEEEEYEDILEDIKEECNKYGVVRSVEIPRPIEGVDVPGCG 411
Query: 70 K 70
K
Sbjct: 412 K 412
>gi|71996490|ref|NP_001022970.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
gi|351018337|emb|CCD62281.1| Protein UAF-1, isoform d [Caenorhabditis elegans]
Length = 471
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DELK +DEYE+I ED+++EC+KYGIVRSLEIPRP E+ VPG GK
Sbjct: 374 ILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGK 428
>gi|71996475|ref|NP_001022967.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
gi|6226906|sp|P90978.2|U2AF2_CAEEL RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|3334906|gb|AAC26982.1| splicing factor U2AF65 [Caenorhabditis elegans]
gi|351018334|emb|CCD62278.1| Protein UAF-1, isoform a [Caenorhabditis elegans]
Length = 496
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DELK +DEYE+I ED+++EC+KYGIVRSLEIPRP E+ VPG GK
Sbjct: 399 ILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGK 453
>gi|71996485|ref|NP_001022969.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
gi|351018336|emb|CCD62280.1| Protein UAF-1, isoform c [Caenorhabditis elegans]
Length = 474
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DELK +DEYE+I ED+++EC+KYGIVRSLEIPRP E+ VPG GK
Sbjct: 377 ILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGK 431
>gi|45387787|ref|NP_991252.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
gi|41389016|gb|AAH65869.1| U2 small nuclear RNA auxiliary factor 2b [Danio rerio]
Length = 475
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+KEEC+KYG V+S+EIPRP++ +D+PG GK
Sbjct: 377 VLCLMNMVAPEELIDDEEYEEIVEDVKEECSKYGQVKSIEIPRPVDGLDIPGTGK 431
>gi|312085420|ref|XP_003144672.1| U2af splicing factor protein 1 [Loa loa]
Length = 143
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 47/55 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMVT DELKD++EYEDI EDI+EEC KYGIV+SLEIPR + VDV G GK
Sbjct: 46 VLCLMNMVTEDELKDDEEYEDILEDIREECAKYGIVKSLEIPRSVPGVDVTGVGK 100
>gi|291241059|ref|XP_002740425.1| PREDICTED: U2 (RNU2) small nuclear RNA auxiliary factor 2-like
[Saccoglossus kowalevskii]
Length = 466
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/55 (76%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMVTPDEL+DE+EYE+I +D+++EC KYG VRSLEIPRPIE V+VPGCGK
Sbjct: 369 VLCLMNMVTPDELQDEEEYEEILDDVRQECGKYGQVRSLEIPRPIEGVEVPGCGK 423
>gi|339243511|ref|XP_003377681.1| splicing factor U2AFsubunit [Trichinella spiralis]
gi|316973494|gb|EFV57074.1| splicing factor U2AFsubunit [Trichinella spiralis]
Length = 402
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 46/55 (83%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMV +EL D +EY+DI EDIKEEC KYG V+S+EIPRPIE +DVPG GK
Sbjct: 305 ILCLMNMVVAEELVDNEEYDDIVEDIKEECCKYGSVKSVEIPRPIEGLDVPGVGK 359
>gi|341891946|gb|EGT47881.1| hypothetical protein CAEBREN_25972 [Caenorhabditis brenneri]
Length = 491
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMVT DELK +++YE+I ED++EEC+KYGIVRSLEIPRP + VPG GK
Sbjct: 394 VLCLMNMVTEDELKSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEHPVPGVGK 448
>gi|71996481|ref|NP_497326.2| Protein UAF-1, isoform b [Caenorhabditis elegans]
gi|351018335|emb|CCD62279.1| Protein UAF-1, isoform b [Caenorhabditis elegans]
Length = 143
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DELK +DEYE+I ED+++EC+KYGIVRSLEIPRP E+ VPG GK
Sbjct: 46 ILCLMNMVTEDELKADDEYEEILEDVRDECSKYGIVRSLEIPRPYEDHPVPGVGK 100
>gi|308477324|ref|XP_003100876.1| CRE-UAF-1 protein [Caenorhabditis remanei]
gi|308264450|gb|EFP08403.1| CRE-UAF-1 protein [Caenorhabditis remanei]
Length = 496
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 47/55 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DEL+ +++YE+I ED++EEC+KYGIVRSLEIPRP + VPG GK
Sbjct: 399 ILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEQPVPGVGK 453
>gi|268575804|ref|XP_002642882.1| C. briggsae CBR-UAF-1 protein [Caenorhabditis briggsae]
gi|60415989|sp|P90727.2|U2AF2_CAEBR RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=U2AF65; AltName:
Full=U2 snRNP auxiliary factor large subunit
Length = 488
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DEL+ +++YE+I ED++EEC+KYGIVRSLEIPRP ++ VPG GK
Sbjct: 390 ILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGK 444
>gi|1710361|gb|AAB38280.1| splicing factor U2AF65 [Caenorhabditis briggsae]
Length = 488
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCL+NMVT DEL+ +++YE+I ED++EEC+KYGIVRSLEIPRP ++ VPG GK
Sbjct: 390 ILCLMNMVTEDELRSDEDYEEILEDVREECSKYGIVRSLEIPRPYDDHPVPGVGK 444
>gi|189308116|gb|ACD86942.1| UAF-1 [Caenorhabditis brenneri]
Length = 108
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMVT DELK +++YE+I ED++EEC+KYGIVRSLEIPRP + VPG GK
Sbjct: 11 VLCLMNMVTEDELKSDEDYEEILEDVREECSKYGIVRSLEIPRPYDEHPVPGVGK 65
>gi|195057468|ref|XP_001995263.1| GH23055 [Drosophila grimshawi]
gi|193899469|gb|EDV98335.1| GH23055 [Drosophila grimshawi]
Length = 453
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV PDEL D+ EYEDI +DIKEEC K+G V S++IPRP PGCGK
Sbjct: 355 VLCLLNMVMPDELLDDAEYEDIRKDIKEECAKFGKVISIKIPRPFGESPQPGCGK 409
>gi|241166827|ref|XP_002409934.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
gi|215494685|gb|EEC04326.1| splicing factor u2af large subunit, putative [Ixodes scapularis]
Length = 444
Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/62 (75%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+N+V P+ELKDE+EYEDI EDI EECNKYG+V+S+EIPRPIE VDVPGCG
Sbjct: 343 PPTE--VLCLMNLVCPEELKDEEEYEDILEDIHEECNKYGVVKSIEIPRPIEGVDVPGCG 400
Query: 70 KA 71
KA
Sbjct: 401 KA 402
>gi|195380577|ref|XP_002049047.1| GJ20975 [Drosophila virilis]
gi|194143844|gb|EDW60240.1| GJ20975 [Drosophila virilis]
Length = 428
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 42/55 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P EL D DEYEDI DIK+EC KYG V+SL+IPRPI + GCGK
Sbjct: 330 VLCLLNMVLPSELLDNDEYEDIRTDIKQECAKYGKVKSLKIPRPIGDPPQTGCGK 384
>gi|427789501|gb|JAA60202.1| Putative splicing factor u2af large subunit rrm superfamily
[Rhipicephalus pulchellus]
Length = 462
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/62 (72%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+N+V P+ELKDE+EYEDI EDI EECNKYG+V+S+EIPRPI+ V+VPGCG
Sbjct: 361 PPTE--VLCLMNLVCPEELKDEEEYEDILEDIHEECNKYGVVKSIEIPRPIDGVEVPGCG 418
Query: 70 KA 71
KA
Sbjct: 419 KA 420
>gi|332375140|gb|AEE62711.1| unknown [Dendroctonus ponderosae]
Length = 374
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 2/45 (4%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
PP VLCLLNMVTPDELKDE+EYEDI EDIKEECNKYG+VRS+
Sbjct: 332 PPTE--VLCLLNMVTPDELKDEEEYEDILEDIKEECNKYGVVRSI 374
>gi|195124159|ref|XP_002006561.1| GI21125 [Drosophila mojavensis]
gi|193911629|gb|EDW10496.1| GI21125 [Drosophila mojavensis]
Length = 427
Score = 78.2 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCLLNMV P EL D+DEY+DI DIK+EC KYG V+SL+IPRP ++ GCGK
Sbjct: 329 VLCLLNMVLPSELTDDDEYDDIRTDIKQECAKYGKVKSLKIPRPGDDSIQGGCGK 383
>gi|260800970|ref|XP_002595369.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
gi|229280615|gb|EEN51381.1| hypothetical protein BRAFLDRAFT_113856 [Branchiostoma floridae]
Length = 524
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/61 (72%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NMV P+EL DE+EYEDI ED++EEC KYG V S+EIPRPIE VDVPGCG
Sbjct: 422 PPTE--VLCLMNMVMPEELMDEEEYEDILEDVREECGKYGAVLSVEIPRPIEGVDVPGCG 479
Query: 70 K 70
K
Sbjct: 480 K 480
>gi|156404394|ref|XP_001640392.1| predicted protein [Nematostella vectensis]
gi|156227526|gb|EDO48329.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV-DVPGCGK 70
VL L+NMVTPDEL D++E+E+I +D++EEC+KYG V+S+EIPRP+E + + PG GK
Sbjct: 233 VLALMNMVTPDELGDDEEFEEIYDDVREECSKYGRVKSMEIPRPMEGLMEPPGVGK 288
>gi|340373805|ref|XP_003385430.1| PREDICTED: splicing factor U2AF 50 kDa subunit-like [Amphimedon
queenslandica]
Length = 529
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+VLCL+NM T +EL+D+DEYE I ED++EEC+ YG V S+ PRP+E VPG GK
Sbjct: 428 TVLCLMNMTTEEELRDDDEYEGILEDVREECSNYGQVLSVAAPRPVEGTLVPGLGK 483
>gi|195489053|ref|XP_002092574.1| GE11595 [Drosophila yakuba]
gi|194178675|gb|EDW92286.1| GE11595 [Drosophila yakuba]
Length = 437
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+LCLLNMV P+EL D +E+EDI DIK+EC KYG VRS++IPRP+ GCGK
Sbjct: 339 ILCLLNMVLPEELLDNEEFEDIRSDIKQECAKYGDVRSIKIPRPVGQFPKRGCGK 393
>gi|195429288|ref|XP_002062695.1| GK19586 [Drosophila willistoni]
gi|194158780|gb|EDW73681.1| GK19586 [Drosophila willistoni]
Length = 466
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGK 70
+LCLLNMV P++L D++EYEDIC DIK+EC+K+G V+ L+IPRP + GCGK
Sbjct: 368 ILCLLNMVQPEDLLDDEEYEDICVDIKQECDKHGKVKGLKIPRPLVGKTPRAGCGK 423
>gi|344277364|ref|XP_003410472.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Loxodonta
africana]
Length = 471
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED++EEC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIMEDVREECSKYGLVKSMEIPRPVDGVEVPGCGK 427
>gi|449680331|ref|XP_002158219.2| PREDICTED: splicing factor U2AF 50 kDa subunit-like, partial [Hydra
magnipapillata]
Length = 259
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 44/56 (78%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
++LCL+NMV DEL D+++Y++I EDI+EEC+KYG +RS++IPRP V G GK
Sbjct: 160 NILCLMNMVVADELIDDEDYDEIFEDIREECSKYGRIRSMQIPRPNHEFLVSGVGK 215
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 51/56 (91%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+VLCL+NMV P EL D++EYE+I +D+++ECNKYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 631 TVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSIEIPRPMDGVEVPGCGK 686
>gi|168021052|ref|XP_001763056.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685868|gb|EDQ72261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+V+ L +V+PDELKD++EY+DI ED+KEEC KYG + L IPRP + DVPG GK
Sbjct: 403 NVVALTQVVSPDELKDDEEYQDILEDMKEECGKYGNLVKLVIPRPRDGEDVPGVGK 458
>gi|405976087|gb|EKC40607.1| Splicing factor U2AF 50 kDa subunit [Crassostrea gigas]
Length = 428
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/61 (72%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NM+ P+EL+DE+EYEDI ED+KEEC+KYG+VRS+EIPRPI+ VDVPGCG
Sbjct: 327 PPTE--VLCLMNMIVPEELEDEEEYEDILEDVKEECSKYGVVRSIEIPRPIKGVDVPGCG 384
Query: 70 K 70
K
Sbjct: 385 K 385
>gi|309266895|ref|XP_003086891.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial [Mus
musculus]
Length = 493
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 51/56 (91%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+VLCL+NMV P EL D++EYE+I +D+++ECNKYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 394 TVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSIEIPRPMDGVEVPGCGK 449
>gi|384500209|gb|EIE90700.1| hypothetical protein RO3G_15411 [Rhizopus delemar RA 99-880]
Length = 490
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 45/54 (83%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
VL L+NMVTP+EL+D++EY+DI EDI EEC K+G V ++IP+P ++ +VPGCG
Sbjct: 393 VLQLMNMVTPEELEDDEEYQDIWEDIAEECAKFGNVLDMKIPKPQKDQEVPGCG 446
>gi|148697816|gb|EDL29763.1| mCG68163 [Mus musculus]
Length = 472
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 51/56 (91%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+VLCL+NMV P EL D++EYE+I +D+++ECNKYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 TVLCLMNMVLPKELLDDEEYEEIVDDVRDECNKYGLVKSIEIPRPMDGVEVPGCGK 428
>gi|297706019|ref|XP_002829852.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pongo abelii]
Length = 352
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 285 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 339
>gi|410054709|ref|XP_003954504.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa subunit
[Pan troglodytes]
Length = 394
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 296 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 350
>gi|168026451|ref|XP_001765745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682922|gb|EDQ69336.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 11 PLRFS--VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGC 68
PL S V+ L +V+PDELKD++EY+DI ED+KEEC KYG + + IPRP + DVPG
Sbjct: 385 PLETSTKVVALTQVVSPDELKDDEEYQDILEDMKEECGKYGNLLRVVIPRPRDGEDVPGV 444
Query: 69 GK 70
GK
Sbjct: 445 GK 446
>gi|344251408|gb|EGW07512.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 422
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 52/56 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKA 71
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGKA
Sbjct: 196 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKA 251
>gi|194884971|ref|XP_001976363.1| GG20057 [Drosophila erecta]
gi|190659550|gb|EDV56763.1| GG20057 [Drosophila erecta]
Length = 440
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
++CLLNMV P+EL D +E+EDI DI++EC KYG VRS++IPRPI GCGK
Sbjct: 342 IICLLNMVLPEELLDNEEFEDIRTDIEQECAKYGEVRSIKIPRPIGQAPKRGCGK 396
>gi|13938661|gb|AAH07487.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 [Mus
musculus]
Length = 306
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 208 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 262
>gi|76779874|gb|AAI06135.1| U2af2 protein [Mus musculus]
Length = 307
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 209 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 263
>gi|390479436|ref|XP_002762565.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Callithrix jacchus]
Length = 453
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 52/56 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKA 71
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGKA
Sbjct: 358 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKA 413
>gi|354486866|ref|XP_003505598.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Cricetulus
griseus]
gi|344242983|gb|EGV99086.1| Splicing factor U2AF 65 kDa subunit [Cricetulus griseus]
Length = 469
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 49/54 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
VLCL+NMV P EL D++EYE+I ED+++EC+KYG+V+S+EIPRP+E V+VPGCG
Sbjct: 371 VLCLMNMVLPKELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVEGVEVPGCG 424
>gi|355756173|gb|EHH59920.1| hypothetical protein EGM_10153, partial [Macaca fascicularis]
Length = 442
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 364 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 418
>gi|327280715|ref|XP_003225097.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Anolis carolinensis]
Length = 456
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 358 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGVVKSIEIPRPVDGVEVPGCGK 412
>gi|449669310|ref|XP_004206989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Hydra
magnipapillata]
Length = 480
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
++LCL+NMV +EL D+++Y++I EDI+EEC+KYG +RS++IPRP V G GK
Sbjct: 381 NILCLMNMVVAEELMDDEDYDEIFEDIREECSKYGRIRSMQIPRPNNEFLVSGIGK 436
>gi|1334149|emb|CAA45875.1| unnamed protein product [Mus musculus]
Length = 492
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 394 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 448
>gi|301782083|ref|XP_002926459.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Ailuropoda
melanoleuca]
Length = 496
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 398 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 452
>gi|197692223|dbj|BAG70075.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
gi|197692475|dbj|BAG70201.1| U2 small nuclear RNA auxiliary factor 2 isoform b [Homo sapiens]
Length = 471
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|355703931|gb|EHH30422.1| hypothetical protein EGK_11092, partial [Macaca mulatta]
Length = 453
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 364 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 418
>gi|63101571|gb|AAH94451.1| U2af2 protein, partial [Mus musculus]
Length = 403
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 305 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 359
>gi|402906865|ref|XP_003916203.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Papio anubis]
Length = 446
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 348 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 402
>gi|327280717|ref|XP_003225098.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Anolis carolinensis]
Length = 467
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 369 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGVVKSIEIPRPVDGVEVPGCGK 423
>gi|60279268|ref|NP_001012496.1| splicing factor U2AF 65 kDa subunit isoform b [Homo sapiens]
gi|164565377|ref|NP_598432.2| splicing factor U2AF 65 kDa subunit isoform 2 [Mus musculus]
gi|109461136|ref|XP_001060115.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 6 [Rattus
norvegicus]
gi|338709958|ref|XP_001496159.3| PREDICTED: splicing factor U2AF 65 kDa subunit [Equus caballus]
gi|348551787|ref|XP_003461710.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 1 [Cavia
porcellus]
gi|359318549|ref|XP_003638845.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Canis lupus
familiaris]
gi|395861318|ref|XP_003802936.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Otolemur garnettii]
gi|397471087|ref|XP_003807136.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Pan paniscus]
gi|403308602|ref|XP_003944746.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Saimiri boliviensis
boliviensis]
gi|14250571|gb|AAH08740.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|27695339|gb|AAH43071.1| U2af2 protein [Mus musculus]
gi|39644972|gb|AAH30574.1| U2 small nuclear RNA auxiliary factor 2 [Homo sapiens]
gi|119592810|gb|EAW72404.1| U2 (RNU2) small nuclear RNA auxiliary factor 2, isoform CRA_c [Homo
sapiens]
gi|148699339|gb|EDL31286.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2,
isoform CRA_a [Mus musculus]
gi|149016700|gb|EDL75886.1| similar to U2 (RNU2) small nuclear RNA auxiliary factor 2 isoform b
[Rattus norvegicus]
gi|261858294|dbj|BAI45669.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|325463253|gb|ADZ15397.1| U2 small nuclear RNA auxiliary factor 2 [synthetic construct]
gi|380783067|gb|AFE63409.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
gi|389618965|gb|AFK92990.1| U2 small nuclear RNA auxiliary factor 2 [Sus scrofa]
gi|410212802|gb|JAA03620.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260572|gb|JAA18252.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291502|gb|JAA24351.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|431902970|gb|ELK09152.1| Splicing factor U2AF 65 kDa subunit [Pteropus alecto]
Length = 471
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|344270173|ref|XP_003406920.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa
subunit-like [Loxodonta africana]
Length = 471
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|410982179|ref|XP_003997437.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Felis catus]
Length = 471
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|444724150|gb|ELW64768.1| Splicing factor U2AF 65 kDa subunit [Tupaia chinensis]
Length = 447
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 349 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 403
>gi|327365322|ref|NP_001192160.1| splicing factor U2AF 65 kDa subunit isoform 1 [Mus musculus]
gi|348551789|ref|XP_003461711.1| PREDICTED: splicing factor U2AF 65 kDa subunit isoform 2 [Cavia
porcellus]
gi|392343893|ref|XP_003748811.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Rattus norvegicus]
gi|136628|sp|P26369.3|U2AF2_MOUSE RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; AltName: Full=U2 snRNP
auxiliary factor large subunit
gi|55101|emb|CAA45874.1| splicing factor U2AF [Mus musculus]
gi|26347321|dbj|BAC37309.1| unnamed protein product [Mus musculus]
Length = 475
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 377 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 431
>gi|410351435|gb|JAA42321.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 471
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|417410850|gb|JAA51891.1| Putative splicing factor u2af large subunit rrm superfamily,
partial [Desmodus rotundus]
Length = 455
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 357 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 411
>gi|6005926|ref|NP_009210.1| splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
gi|267188|sp|P26368.4|U2AF2_HUMAN RecName: Full=Splicing factor U2AF 65 kDa subunit; AltName: Full=U2
auxiliary factor 65 kDa subunit; Short=hU2AF(65);
Short=hU2AF65; AltName: Full=U2 snRNP auxiliary factor
large subunit
gi|37545|emb|CAA45409.1| splicing factor U2AF [Homo sapiens]
gi|380783065|gb|AFE63408.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
gi|410212804|gb|JAA03621.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410260574|gb|JAA18253.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
gi|410291504|gb|JAA24352.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 377 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 431
>gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=large
Length = 475
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 377 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 431
>gi|195999450|ref|XP_002109593.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
gi|190587717|gb|EDV27759.1| hypothetical protein TRIADDRAFT_21652 [Trichoplax adhaerens]
Length = 476
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
+L L+NMVT +EL D++EYEDI ED++ E +K V+SLEIPRPIE VDV G GK
Sbjct: 379 ILQLMNMVTEEELVDDEEYEDIIEDVRAEVSKIAPVKSLEIPRPIEGVDVAGVGK 433
>gi|115496604|ref|NP_001068804.1| splicing factor U2AF 65 kDa subunit [Bos taurus]
gi|89994093|gb|AAI14161.1| U2 small nuclear RNA auxiliary factor 2 [Bos taurus]
gi|296477253|tpg|DAA19368.1| TPA: U2 (RNU2) small nuclear RNA auxiliary factor 2 [Bos taurus]
Length = 475
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 50/55 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 377 VLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPRPVDGVEVPGCGK 431
>gi|410351437|gb|JAA42322.1| U2 small nuclear RNA auxiliary factor 2 [Pan troglodytes]
Length = 475
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 377 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 431
>gi|320170643|gb|EFW47542.1| splicing factor u2af large subunit [Capsaspora owczarzaki ATCC
30864]
Length = 393
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 43/55 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
V+ LLNMVTP+EL D +EY+DI +DI+EEC+KYG V S+ IPRP+ +V G GK
Sbjct: 296 VVQLLNMVTPEELMDPEEYQDIVDDIREECSKYGEVVSVAIPRPVPGREVSGVGK 350
>gi|351710523|gb|EHB13442.1| Splicing factor U2AF 65 kDa subunit [Heterocephalus glaber]
Length = 904
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 446 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 500
>gi|297277970|ref|XP_001091568.2| PREDICTED: splicing factor U2AF 65 kDa subunit [Macaca mulatta]
Length = 471
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|384496094|gb|EIE86585.1| hypothetical protein RO3G_11296 [Rhizopus delemar RA 99-880]
Length = 502
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 44/54 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
VL L+NMV+P+EL+D++EY+DI EDI EEC K+G + ++IP+P ++ VPGCG
Sbjct: 405 VLQLMNMVSPEELEDDEEYQDIWEDIAEECAKFGNIVDMKIPKPQKDQQVPGCG 458
>gi|198432988|ref|XP_002130386.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 1 [Ciona intestinalis]
Length = 482
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+VLCL+NMV P+EL D++EYE+I ED+K+EC K G V SLEIPRP
Sbjct: 382 TVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSLEIPRP 426
>gi|198432986|ref|XP_002130494.1| PREDICTED: similar to U2 small nuclear ribonucleoprotein auxiliary
factor (U2AF) 2 isoform 2 [Ciona intestinalis]
Length = 472
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+VLCL+NMV P+EL D++EYE+I ED+K+EC K G V SLEIPRP
Sbjct: 372 TVLCLMNMVLPEELTDDEEYEEIMEDVKDECGKLGSVVSLEIPRP 416
>gi|426244214|ref|XP_004015921.1| PREDICTED: splicing factor U2AF 65 kDa subunit [Ovis aries]
Length = 471
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 50/55 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|198456623|ref|XP_001360392.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
gi|198135682|gb|EAL24967.2| GA16338 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VLCLLNMV P+EL D +EYEDI DI++EC+KYG V SL+IPRP
Sbjct: 381 VLCLLNMVLPEELLDNEEYEDIRADIEQECSKYGEVLSLKIPRP 424
>gi|361132025|gb|EHL03640.1| putative Splicing factor U2AF 50 kDa subunit [Glarea lozoyensis
74030]
Length = 568
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVTP+EL D D+YE+ICED+KEEC KYG V +++PRP
Sbjct: 470 VLQLLNMVTPEELVDNDDYEEICEDVKEECEKYGKVLDMKVPRP 513
>gi|296811258|ref|XP_002845967.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
gi|238843355|gb|EEQ33017.1| splicing factor U2AF subunit [Arthroderma otae CBS 113480]
Length = 557
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D D+YE+ICED+++EC+KYG+V L+IPRP
Sbjct: 459 VLQLLNMVTADELIDNDDYEEICEDVQDECSKYGVVEELKIPRP 502
>gi|195149862|ref|XP_002015874.1| GL11290 [Drosophila persimilis]
gi|194109721|gb|EDW31764.1| GL11290 [Drosophila persimilis]
Length = 487
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VLCLLNMV P+EL D +EYEDI DI++EC+KYG V SL+IPRP
Sbjct: 377 VLCLLNMVLPEELLDNEEYEDIRADIEQECSKYGEVLSLKIPRP 420
>gi|328862941|gb|EGG12041.1| hypothetical protein MELLADRAFT_41759 [Melampsora larici-populina
98AG31]
Length = 397
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 13 RFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
R VL +LNMV P+EL D++EY++I EDIKEEC+KYG + ++IPRP +N
Sbjct: 266 RTKVLQMLNMVNPEELVDDEEYKEILEDIKEECSKYGQIEDVKIPRPAKN 315
>gi|327297188|ref|XP_003233288.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
gi|326464594|gb|EGD90047.1| splicing factor u2af large subunit [Trichophyton rubrum CBS 118892]
Length = 563
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D ++YE+ICED++EEC+KYG+V L+IPRP
Sbjct: 458 VLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEELKIPRP 501
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN-VDVPG 67
+P V+CL +V+PDELK++DEYE+I ED++EEC KYG V +L +PRP N +V G
Sbjct: 308 MPETPTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAG 367
Query: 68 CGK 70
GK
Sbjct: 368 VGK 370
>gi|315044445|ref|XP_003171598.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
gi|311343941|gb|EFR03144.1| splicing factor U2AF subunit [Arthroderma gypseum CBS 118893]
Length = 565
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D ++YE+ICED++EEC+KYG+V L+IPRP
Sbjct: 467 VLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEELKIPRP 510
>gi|322693990|gb|EFY85833.1| splicing factor, putative [Metarhizium acridum CQMa 102]
Length = 584
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVTP+EL D +EYE+ICED++EEC+K+G + L+IPRP+
Sbjct: 475 VLQLLNMVTPEELMDTEEYEEICEDVREECSKFGNILELKIPRPV 519
>gi|326475623|gb|EGD99632.1| splicing factor u2af large subunit [Trichophyton tonsurans CBS
112818]
gi|326483752|gb|EGE07762.1| splicing factor U2AF subunit [Trichophyton equinum CBS 127.97]
Length = 565
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D ++YE+ICED++EEC+KYG+V L+IPRP
Sbjct: 458 VLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEELKIPRP 501
>gi|121711505|ref|XP_001273368.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
gi|119401519|gb|EAW11942.1| splicing factor u2af large subunit [Aspergillus clavatus NRRL 1]
Length = 583
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+YE+IC+D++EEC+KYG V L++PRP + PG GK
Sbjct: 467 VLQLLNMVTPEELMDNDDYEEICDDVREECSKYGKVLDLKVPRPSGGSRQSPGVGK 522
>gi|71022561|ref|XP_761510.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
gi|46101379|gb|EAK86612.1| hypothetical protein UM05363.1 [Ustilago maydis 521]
Length = 727
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 37/45 (82%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+ + +LNMVTP+EL+D++EY DI EDI++ECNKYG V + IPRP
Sbjct: 583 TCMVMLNMVTPEELQDDEEYADIVEDIRDECNKYGAVSDVRIPRP 627
>gi|378731414|gb|EHY57873.1| U2AF domain-containing protein (UHM) kinase 1 [Exophiala
dermatitidis NIH/UT8656]
Length = 574
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVTP++L D D+YE+ICED+ EEC+KYG + S++IPRP
Sbjct: 477 VLQLLNMVTPEDLMDNDDYEEICEDVMEECSKYGKILSMKIPRP 520
>gi|302511201|ref|XP_003017552.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
gi|291181123|gb|EFE36907.1| hypothetical protein ARB_04434 [Arthroderma benhamiae CBS 112371]
Length = 501
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D ++YE+ICED++EEC+KYG+V L+IPRP
Sbjct: 396 VLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEELKIPRP 439
>gi|258576333|ref|XP_002542348.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902614|gb|EEP77015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 621
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D DEYE+IC+D++EEC+KYG V L+IPRP
Sbjct: 451 VLQLLNMVTAEELMDSDEYEEICDDVREECSKYGQVLDLKIPRP 494
>gi|119482894|ref|XP_001261475.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
gi|119409630|gb|EAW19578.1| splicing factor u2af large subunit [Neosartorya fischeri NRRL 181]
Length = 563
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+YE+IC+D++EEC+KYG V L++PRP + PG GK
Sbjct: 465 VLQLLNMVTPEELLDNDDYEEICDDVREECSKYGKVLDLKVPRPSGGSRQSPGVGK 520
>gi|407929464|gb|EKG22293.1| hypothetical protein MPH_00360 [Macrophomina phaseolina MS6]
Length = 824
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 39/55 (70%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLNMVTP+EL D EYE+I ED+ EEC+KYG V L+IPRP + G GK
Sbjct: 250 VLMLLNMVTPEELMDPQEYEEIQEDVHEECSKYGKVEELKIPRPQPPKENKGVGK 304
>gi|302656965|ref|XP_003020217.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
gi|291184026|gb|EFE39599.1| hypothetical protein TRV_05722 [Trichophyton verrucosum HKI 0517]
Length = 486
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 38/44 (86%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D ++YE+ICED++EEC+KYG+V L+IPRP
Sbjct: 396 VLQLLNMVTADELIDNEDYEEICEDVQEECSKYGVVEELKIPRP 439
>gi|440468063|gb|ELQ37246.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae Y34]
gi|440489023|gb|ELQ68704.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae P131]
Length = 640
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D D+YE+ICED++EEC KYG V L++PRP
Sbjct: 522 VLQLLNMVTADELMDNDDYEEICEDVQEECAKYGTVIELKVPRP 565
>gi|389642205|ref|XP_003718735.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
gi|351641288|gb|EHA49151.1| splicing factor U2AF 50 kDa subunit [Magnaporthe oryzae 70-15]
Length = 620
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D D+YE+ICED++EEC KYG V L++PRP
Sbjct: 522 VLQLLNMVTADELMDNDDYEEICEDVQEECAKYGTVIELKVPRP 565
>gi|159162769|pdb|1O0P|A Chain A, Solution Structure Of The Third Rna Recognition Motif
(Rrm) Of U2af65 In Complex With An N-Terminal Sf1
Peptide
Length = 104
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 6 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 60
>gi|159162801|pdb|1OPI|A Chain A, Solution Structure Of The Third Rna Recognition Motif
(Rrm) Of U2af65 In Complex With An N-Terminal Sf1
Peptide
gi|444302011|pdb|2M0G|B Chain B, Structure, Phosphorylation And U2af65 Binding Of The
Nterminal Domain Of Splicing Factor 1 During 3 Splice
Site Recognition
Length = 104
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 6 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 60
>gi|71480064|ref|NP_001025127.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
gi|68533572|gb|AAH98548.1| U2 small nuclear RNA auxiliary factor 2a [Danio rerio]
Length = 465
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG V+S+EIPRP++ +D+PG GK
Sbjct: 367 VLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLDIPGTGK 421
>gi|340520531|gb|EGR50767.1| predicted protein [Trichoderma reesei QM6a]
Length = 539
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 13 RFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
R SV+ LLNMVTP+EL D D+YE+ICED+++EC+K+G V L++PRP
Sbjct: 455 RSSVIQLLNMVTPEELLDNDDYEEICEDVQDECSKFGKVVELKVPRP 501
>gi|326428095|gb|EGD73665.1| U2 small nuclear ribonucleoprotein auxiliary factor 2 isoform 2
[Salpingoeca sp. ATCC 50818]
Length = 415
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVD--VPGCGKAT 72
+L L+NMVT DEL+D++EYEDIC DI+EEC K+G + ++IPRP EN + VPG GK
Sbjct: 313 ILILMNMVTVDELRDDEEYEDICADIREECEKFGEILDMKIPRPSKENPEEQVPGVGKIY 372
Query: 73 L 73
L
Sbjct: 373 L 373
>gi|347842431|emb|CCD57003.1| hypothetical protein [Botryotinia fuckeliana]
Length = 606
Score = 67.8 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVTP+EL D ++YE+ICED+KEEC KYG V +++PRP
Sbjct: 508 VLQLLNMVTPEELIDNEDYEEICEDVKEECEKYGKVLEMKVPRP 551
>gi|297302956|ref|XP_001119590.2| PREDICTED: splicing factor U2AF 65 kDa subunit-like, partial
[Macaca mulatta]
Length = 432
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 50/55 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG+V+S+EIPR ++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRLVDGVEVPGCGK 427
>gi|432908697|ref|XP_004077989.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oryzias latipes]
Length = 474
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED++EEC KYG V+S+EIPRP++ ++VPG GK
Sbjct: 376 VLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIEIPRPVDGLEVPGTGK 430
>gi|154319442|ref|XP_001559038.1| hypothetical protein BC1G_02202 [Botryotinia fuckeliana B05.10]
Length = 596
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVTP+EL D ++YE+ICED+KEEC KYG V +++PRP
Sbjct: 498 VLQLLNMVTPEELIDNEDYEEICEDVKEECEKYGKVLEMKVPRP 541
>gi|358378060|gb|EHK15743.1| hypothetical protein TRIVIDRAFT_79964 [Trichoderma virens Gv29-8]
Length = 503
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 13 RFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
R SV+ LLNMVTP+EL D D+YE+ICED+++EC+K+G V L++PRP
Sbjct: 402 RSSVIQLLNMVTPEELMDNDDYEEICEDVQDECSKFGKVVELKVPRP 448
>gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]
Length = 640
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
+VL + NMV+ DEL+D+DEY D+ ED++EEC ++G V LEIPRP + +VPG G
Sbjct: 541 AVLKMANMVSIDELRDDDEYADLAEDVEEECKRFGNVTGLEIPRPKDGEEVPGLG 595
>gi|388856534|emb|CCF49840.1| related to pre-mRNA splicing factor U2AF large chain [Ustilago
hordei]
Length = 718
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
S + +LNMVTP+EL+D++EY DI EDI+EEC KYG V + +PRP
Sbjct: 573 SCMVMLNMVTPEELQDDEEYADIVEDIREECTKYGTVTDVRVPRP 617
>gi|302685922|ref|XP_003032641.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
gi|300106335|gb|EFI97738.1| hypothetical protein SCHCODRAFT_75908 [Schizophyllum commune H4-8]
Length = 556
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
VL +LNMVTPD+L D+DEY D+ EDIKEEC+K+G V L +PRP++
Sbjct: 418 VLLMLNMVTPDDLVDDDEYGDLLEDIKEECSKFGPVEDLRVPRPVK 463
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
+P V+CL +V+PDELK++DEYE+I ED++EEC KYG V +L +PRP + +V G
Sbjct: 309 MPETPTKVVCLKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPKSDGEEVAG 368
Query: 68 CGK 70
GK
Sbjct: 369 VGK 371
>gi|432908695|ref|XP_004077988.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oryzias latipes]
Length = 458
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED++EEC KYG V+S+EIPRP++ ++VPG GK
Sbjct: 360 VLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIEIPRPVDGLEVPGTGK 414
>gi|432908699|ref|XP_004077990.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oryzias latipes]
Length = 479
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED++EEC KYG V+S+EIPRP++ ++VPG GK
Sbjct: 381 VLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIEIPRPVDGLEVPGTGK 435
>gi|115400045|ref|XP_001215611.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
gi|114191277|gb|EAU32977.1| hypothetical protein ATEG_06433 [Aspergillus terreus NIH2624]
Length = 413
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVT +EL D D+YE+ICED++EEC+KYG V L++PRP + PG GK
Sbjct: 320 VLQLLNMVTAEELIDNDDYEEICEDVREECSKYGQVLELKVPRPSGGSRQSPGVGK 375
>gi|391864554|gb|EIT73849.1| splicing factor U2AF, large subunit [Aspergillus oryzae 3.042]
Length = 538
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+Y++IC+D++EEC KYG V L+IPRP + PG GK
Sbjct: 440 VLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGK 495
>gi|156061663|ref|XP_001596754.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980]
gi|154700378|gb|EDO00117.1| hypothetical protein SS1G_02977 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 518
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVTP+EL D ++YE+ICED+KEEC KYG V +++PRP
Sbjct: 423 VLQLLNMVTPEELIDNEDYEEICEDVKEECEKYGKVLEMKVPRP 466
>gi|317139209|ref|XP_001817348.2| splicing factor u2af large subunit [Aspergillus oryzae RIB40]
Length = 538
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+Y++IC+D++EEC KYG V L+IPRP + PG GK
Sbjct: 440 VLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGK 495
>gi|159123253|gb|EDP48373.1| splicing factor u2af large subunit [Aspergillus fumigatus A1163]
Length = 567
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+YE+IC+D++EEC KYG V L++PRP + PG GK
Sbjct: 469 VLQLLNMVTPEELLDNDDYEEICDDVREECFKYGKVLDLKVPRPSGGSRQSPGVGK 524
>gi|146324846|ref|XP_748978.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
gi|129556630|gb|EAL86940.2| splicing factor u2af large subunit [Aspergillus fumigatus Af293]
Length = 563
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+YE+IC+D++EEC KYG V L++PRP + PG GK
Sbjct: 465 VLQLLNMVTPEELLDNDDYEEICDDVREECFKYGKVLDLKVPRPSGGSRQSPGVGK 520
>gi|402073699|gb|EJT69251.1| splicing factor U2AF 50 kDa subunit [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 623
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D D+YE+IC+D++EEC+K+G + L+IPRP
Sbjct: 525 VLQLLNMVTADELLDNDDYEEICDDVREECSKFGTILELKIPRP 568
>gi|343426615|emb|CBQ70144.1| related to pre-mRNA splicing factor U2AF large chain [Sporisorium
reilianum SRZ2]
Length = 710
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
S + +LNMVTP+EL+D++EY DI EDI++EC KYG V + +PRP
Sbjct: 569 SCMVMLNMVTPEELQDDEEYADIVEDIRDECTKYGAVTDVRVPRP 613
>gi|238482353|ref|XP_002372415.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
gi|220700465|gb|EED56803.1| splicing factor u2af large subunit [Aspergillus flavus NRRL3357]
Length = 556
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+Y++IC+D++EEC KYG V L+IPRP + PG GK
Sbjct: 458 VLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGK 513
>gi|83765203|dbj|BAE55346.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 563
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+Y++IC+D++EEC KYG V L+IPRP + PG GK
Sbjct: 461 VLQLLNMVTPEELMDNDDYDEICDDVREECAKYGQVVELKIPRPSGGSRQSPGVGK 516
>gi|358391563|gb|EHK40967.1| hypothetical protein TRIATDRAFT_135674 [Trichoderma atroviride IMI
206040]
Length = 558
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 39/47 (82%)
Query: 13 RFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
R SV+ LLNMVTP+EL D D+YE+ICED+++EC K+G V L++PRP
Sbjct: 457 RSSVIQLLNMVTPEELIDNDDYEEICEDVQDECAKFGKVVELKVPRP 503
>gi|348526426|ref|XP_003450720.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 2
[Oreochromis niloticus]
Length = 487
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG V+S+EIPRP++ ++VPG GK
Sbjct: 389 VLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGK 443
>gi|443924699|gb|ELU43686.1| rRNA primary transcript binding protein [Rhizoctonia solani AG-1
IA]
Length = 678
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P ++L LLNMV P++L D+ EY +I ED++EEC+K+G VRSL IPRP
Sbjct: 456 PSDSTILLLLNMVAPEDLTDDGEYTEIVEDVREECSKFGPVRSLAIPRP 504
>gi|301121478|ref|XP_002908466.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 597
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 42/55 (76%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
+VL + NMV+ DEL+D++EY D+ ED++EEC ++G V +EIPRP + +VPG G
Sbjct: 498 AVLKMANMVSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLG 552
>gi|348526424|ref|XP_003450719.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 1
[Oreochromis niloticus]
Length = 475
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG V+S+EIPRP++ ++VPG GK
Sbjct: 377 VLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGK 431
>gi|348526428|ref|XP_003450721.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like isoform 3
[Oreochromis niloticus]
Length = 458
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG V+S+EIPRP++ ++VPG GK
Sbjct: 360 VLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGK 414
>gi|47221657|emb|CAF97922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 458
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC+KYG V+S+EIPRP++ ++VPG GK
Sbjct: 360 VLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGK 414
>gi|392565476|gb|EIW58653.1| hypothetical protein TRAVEDRAFT_37512 [Trametes versicolor
FP-101664 SS1]
Length = 548
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 1 MYPPWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
+ P +R + ++ +L +LNMV P+EL D+ EY D+ ED+KEEC KYG V L IPRP+
Sbjct: 401 IMPVGERDLEAMQDRILLMLNMVVPEELSDDQEYGDLYEDVKEECEKYGTVEDLRIPRPV 460
Query: 61 E 61
+
Sbjct: 461 K 461
>gi|358369529|dbj|GAA86143.1| splicing factor u2af large subunit [Aspergillus kawachii IFO 4308]
Length = 571
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D ++YE+IC+D+++EC+KYG V L++PRP + PG GK
Sbjct: 473 VLQLLNMVTPEELMDPEDYEEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGK 528
>gi|392589921|gb|EIW79251.1| hypothetical protein CONPUDRAFT_83522 [Coniophora puteana
RWD-64-598 SS2]
Length = 411
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMVT D+L+D+DEY DI ED+KEEC+K+G V L IPRPI+
Sbjct: 277 ILLMLNMVTVDDLQDDDEYGDIYEDVKEECSKHGAVEDLRIPRPIK 322
>gi|395331854|gb|EJF64234.1| hypothetical protein DICSQDRAFT_144911 [Dichomitus squalens
LYAD-421 SS1]
Length = 587
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMV P+EL+D+ EY DI ED+KEEC KYG V L IPRP++
Sbjct: 454 ILLMLNMVVPEELQDDQEYADILEDVKEECGKYGEVEDLRIPRPVK 499
>gi|324503285|gb|ADY41429.1| Splicing factor U2AF 65 kDa subunit [Ascaris suum]
Length = 522
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NMVT +ELK+++EYEDI EDI+EEC KYG V+S+E+PR I VDV G G
Sbjct: 421 PPTE--VLCLMNMVTEEELKEDEEYEDILEDIREECAKYGFVKSIEVPRSIPGVDVTGVG 478
Query: 70 K 70
K
Sbjct: 479 K 479
>gi|299745153|ref|XP_001831503.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|298406457|gb|EAU90350.2| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 550
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMVTPD+L D++EY D+ ED+KEEC+KYG V L IPRP++
Sbjct: 417 ILLMLNMVTPDDLIDDEEYGDLYEDVKEECSKYGEVEDLRIPRPVK 462
>gi|410905623|ref|XP_003966291.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Takifugu
rubripes]
Length = 458
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 48/55 (87%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I ED+++EC KYG V+S+EIPRP++ ++VPG GK
Sbjct: 360 VLCLMNMVAPEELLDDEEYEEIVEDVRDECGKYGQVKSIEIPRPVDGLEVPGTGK 414
>gi|403413555|emb|CCM00255.1| predicted protein [Fibroporia radiculosa]
Length = 582
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMV P++L D+ EY D+ ED+KEEC+KYG+V L IPRP++
Sbjct: 449 ILLMLNMVVPEDLTDDQEYADVYEDVKEECSKYGLVEDLRIPRPVK 494
>gi|259480265|tpe|CBF71237.1| TPA: splicing factor u2af large subunit (AFU_orthologue;
AFUA_7G05310) [Aspergillus nidulans FGSC A4]
Length = 547
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D ++YE+IC+D+++EC+K+G V L+IPRP + PG GK
Sbjct: 449 VLQLLNMVTPEELMDNEDYEEICDDVRDECSKFGRVLELKIPRPTGGSRQSPGVGK 504
>gi|225677913|gb|EEH16197.1| splicing factor U2AF 65 kDa subunit ) [Paracoccidioides
brasiliensis Pb03]
gi|226287345|gb|EEH42858.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides brasiliensis
Pb18]
Length = 567
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVT DEL D D+YE+IC+D+++EC+KYG V L++PRP N G GK
Sbjct: 469 VLQLLNMVTTDELLDNDDYEEICDDVRDECSKYGQVVELKVPRPTGNNKQSAGVGK 524
>gi|350635494|gb|EHA23855.1| hypothetical protein ASPNIDRAFT_209800 [Aspergillus niger ATCC
1015]
Length = 566
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D ++Y++IC+D+++EC+KYG V L++PRP + PG GK
Sbjct: 448 VLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGK 503
>gi|367020820|ref|XP_003659695.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
gi|347006962|gb|AEO54450.1| hypothetical protein MYCTH_2297048 [Myceliophthora thermophila ATCC
42464]
Length = 567
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVTP+EL D D+YE+I ED++EEC K+G + SL+IPRP+
Sbjct: 469 VLQLLNMVTPEELMDNDDYEEIREDVQEECQKFGKILSLKIPRPV 513
>gi|295663747|ref|XP_002792426.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279096|gb|EEH34662.1| splicing factor U2AF 50 kDa subunit [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 567
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
VL LLNMVT DEL D D+YE+IC+D+++EC+KYG V L++PRP N
Sbjct: 469 VLQLLNMVTTDELLDNDDYEEICDDVRDECSKYGQVVELKVPRPTGN 515
>gi|134075845|emb|CAL00224.1| unnamed protein product [Aspergillus niger]
Length = 598
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D ++Y++IC+D+++EC+KYG V L++PRP + PG GK
Sbjct: 480 VLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGK 535
>gi|67541022|ref|XP_664285.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
gi|40738434|gb|EAA57624.1| hypothetical protein AN6681.2 [Aspergillus nidulans FGSC A4]
Length = 624
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D ++YE+IC+D+++EC+K+G V L+IPRP + PG GK
Sbjct: 449 VLQLLNMVTPEELMDNEDYEEICDDVRDECSKFGRVLELKIPRPTGGSRQSPGVGK 504
>gi|224094725|ref|XP_002310209.1| predicted protein [Populus trichocarpa]
gi|222853112|gb|EEE90659.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGC 68
PP+ V+CL +VT DELKD+DEYEDI EDI+ E K+G + ++ IPRP + + PG
Sbjct: 288 PPVVTKVVCLTQVVTVDELKDDDEYEDILEDIRMEAGKFGQLVNVVIPRPRPDGENAPGV 347
Query: 69 GKATL 73
GK L
Sbjct: 348 GKVFL 352
>gi|443898020|dbj|GAC75358.1| splicing factor U2AF, large subunit [Pseudozyma antarctica T-34]
Length = 699
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
S + +LNMVTP+EL+D++EY DI EDI++EC K+G V + +PRP
Sbjct: 556 SCMVMLNMVTPEELQDDEEYADIVEDIRDECTKFGTVNDVRVPRP 600
>gi|317029342|ref|XP_001391373.2| splicing factor u2af large subunit [Aspergillus niger CBS 513.88]
Length = 561
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/56 (53%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D ++Y++IC+D+++EC+KYG V L++PRP + PG GK
Sbjct: 463 VLQLLNMVTPEELMDPEDYDEICDDVRDECSKYGTVVELKVPRPTGGSRQSPGVGK 518
>gi|320590609|gb|EFX03052.1| splicing factor u2af large subunit [Grosmannia clavigera kw1407]
Length = 420
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE-NVDVPGCGK 70
V+ LLNMVT +EL + D+YEDICED+ EEC K+G V L++PRP PG GK
Sbjct: 177 VVQLLNMVTAEELVNNDDYEDICEDVTEECAKFGPVMGLKVPRPASGGRHSPGVGK 232
>gi|341038664|gb|EGS23656.1| hypothetical protein CTHT_0003520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 584
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVTP+EL D D+YE+I ED+ EEC K+G V SL+IPRPI N G GK
Sbjct: 486 VLQLLNMVTPEELMDNDDYEEIREDVLEECKKFGNVLSLKIPRPIGGNRQSAGVGK 541
>gi|336381013|gb|EGO22165.1| hypothetical protein SERLADRAFT_371639 [Serpula lacrymans var.
lacrymans S7.9]
Length = 381
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMVTPD+L D+ EY D+ ED+KEEC+ YG V L IPRP++
Sbjct: 246 ILLMLNMVTPDDLTDDQEYGDLYEDVKEECSVYGAVEDLRIPRPVK 291
>gi|75338883|sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
subunit A; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit A;
Short=U2 snRNP auxiliary factor large subunit A
gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 555
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN-VDVPGCGK 70
L VLCL +VT DEL D+D+Y+DI ED++ EC K+G + ++ IPRP N V PG GK
Sbjct: 451 LATKVLCLTEVVTVDELNDDDDYQDILEDMRTECEKFGALVNVVIPRPNPNGVPTPGLGK 510
Query: 71 ATL 73
L
Sbjct: 511 VFL 513
>gi|116192501|ref|XP_001222063.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
gi|88181881|gb|EAQ89349.1| hypothetical protein CHGG_05968 [Chaetomium globosum CBS 148.51]
Length = 566
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVTPDEL D D+YE+I +D++EEC K+G + S++IPRP
Sbjct: 468 VLQLLNMVTPDELMDNDDYEEIRDDVQEECEKFGKILSIKIPRP 511
>gi|346324367|gb|EGX93964.1| splicing factor u2af large subunit [Cordyceps militaris CM01]
Length = 583
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+ICED+++EC+KYG V +++PRP
Sbjct: 485 VLQLLNMVTAEELLDNDDYEEICEDVRDECSKYGKVLDVKVPRP 528
>gi|50882018|gb|AAT85577.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit
[Alvinella pompejana]
Length = 479
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMVTP++L+DE+EYE+I ED+KEEC+KYG V+S+EIPRPI+ V+VPG GK
Sbjct: 382 VLCLMNMVTPEDLEDEEEYEEILEDVKEECSKYGYVKSIEIPRPIKGVEVPGVGK 436
>gi|342873171|gb|EGU75391.1| hypothetical protein FOXB_14096 [Fusarium oxysporum Fo5176]
Length = 661
Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+ICED+KEEC+K+G + +++PRP
Sbjct: 474 VLQLLNMVTAEELLDNDDYEEICEDVKEECSKFGKIIDVKVPRP 517
>gi|302916595|ref|XP_003052108.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
gi|256733047|gb|EEU46395.1| hypothetical protein NECHADRAFT_38412 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+ICED+KEEC+K+G + ++IPRP
Sbjct: 453 VLQLLNMVTAEELLDNDDYEEICEDVKEECSKFGKIIDMKIPRP 496
>gi|299470773|emb|CBN79819.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 636
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
R +PP R VL +LNMVT EL+D EYEDI +DI++EC+ +G V S+ +PRP E
Sbjct: 531 RAIPPTR--VLVMLNMVTEAELRDPQEYEDIVDDIQQECSSHGTVLSIIVPRPGE 583
>gi|303323229|ref|XP_003071606.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240111308|gb|EER29461.1| splicing factor, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 545
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG V +++PRP
Sbjct: 447 VLQLLNMVTAEELMDNDDYEEICDDVRDECSKYGQVLEMKVPRP 490
>gi|320031290|gb|EFW13263.1| splicing factor u2af large subunit [Coccidioides posadasii str.
Silveira]
Length = 545
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG V +++PRP
Sbjct: 447 VLQLLNMVTAEELMDNDDYEEICDDVRDECSKYGQVLEMKVPRP 490
>gi|224134362|ref|XP_002327819.1| predicted protein [Populus trichocarpa]
gi|222836904|gb|EEE75297.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN-VDVPGCGKATL 73
V+CL +VT DELKD+DEYEDI ED++ E K+G++ ++ IPRP N + PG GK L
Sbjct: 441 VVCLTQVVTGDELKDDDEYEDILEDMRTEAGKFGLLVNVVIPRPRPNGENAPGVGKVFL 499
>gi|380481793|emb|CCF41637.1| U2 snRNP auxilliary factor [Colletotrichum higginsianum]
Length = 550
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVTP+EL D D+YE+I ED++EEC+K+G V ++IPRP+
Sbjct: 452 VLQLLNMVTPEELMDNDDYEEIKEDVQEECSKFGNVLDIKIPRPV 496
>gi|442570696|pdb|4FXW|A Chain A, Structure Of Phosphorylated Sf1 Complex With U2af65-uhm
Domain
gi|442570698|pdb|4FXW|C Chain C, Structure Of Phosphorylated Sf1 Complex With U2af65-uhm
Domain
Length = 106
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL N V P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 8 VLCLXNXVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 62
>gi|408397958|gb|EKJ77095.1| hypothetical protein FPSE_02739 [Fusarium pseudograminearum CS3096]
Length = 554
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+ICED++EEC+KYG + +++PRP
Sbjct: 456 VLQLLNMVTAEELLDNDDYEEICEDVREECSKYGKILDVKVPRP 499
>gi|390980893|pdb|3V4M|A Chain A, Crystal Structure Of A Rna Binding Domain Of A U2 Small
Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2af)
From Mus Musculus At 1.80 A Resolution
gi|390980894|pdb|3V4M|B Chain B, Crystal Structure Of A Rna Binding Domain Of A U2 Small
Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2af)
From Mus Musculus At 1.80 A Resolution
Length = 105
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 49/55 (89%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL N V P+EL D++EYE+I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 7 VLCLXNXVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 61
>gi|46125343|ref|XP_387225.1| hypothetical protein FG07049.1 [Gibberella zeae PH-1]
Length = 564
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+ICED++EEC+KYG + +++PRP
Sbjct: 456 VLQLLNMVTAEELLDNDDYEEICEDVREECSKYGKILDVKVPRP 499
>gi|154280004|ref|XP_001540815.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412758|gb|EDN08145.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 571
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGK 70
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG V L++PRP N G GK
Sbjct: 473 VLQLLNMVTTEELIDNDDYEEICDDVRDECSKYGEVVELKVPRPTGNNKQSAGVGK 528
>gi|449299113|gb|EMC95127.1| hypothetical protein BAUCODRAFT_526859 [Baudoinia compniacensis
UAMH 10762]
Length = 432
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VLCL+NM+TP+EL D DE ++I ED+KEEC KYG + +++PRP
Sbjct: 334 VLCLMNMITPEELMDADEADEILEDVKEECAKYGAIIDVKMPRP 377
>gi|261196608|ref|XP_002624707.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239595952|gb|EEQ78533.1| splicing factor u2af large subunit [Ajellomyces dermatitidis
SLH14081]
gi|239609528|gb|EEQ86515.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ER-3]
gi|327350238|gb|EGE79095.1| splicing factor u2af large subunit [Ajellomyces dermatitidis ATCC
18188]
Length = 570
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG V L++PRP N
Sbjct: 472 VLQLLNMVTTEELMDNDDYEEICDDVRDECSKYGEVVELKVPRPTGN 518
>gi|400602736|gb|EJP70338.1| splicing factor U2AF 65 kDa subunit [Beauveria bassiana ARSEF 2860]
Length = 576
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG + L++PRP
Sbjct: 478 VLQLLNMVTAEELLDNDDYEEICDDVRDECSKYGKILDLKVPRP 521
>gi|167515386|ref|XP_001742034.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
gi|163778658|gb|EDQ92272.1| RNA-binding region RNP-1 containing protein [Monosiga brevicollis
MX1]
Length = 431
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP 66
VL L+NMVT +EL+D++EY+DI EDI+EEC K+G + L+IPRP+ + P
Sbjct: 333 VLVLMNMVTKEELQDDEEYKDIMEDIREECGKFGNITDLKIPRPVAEGEQP 383
>gi|430813569|emb|CCJ29085.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 545
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL + NMVTP+EL+D+DEYE+I EDI++EC+KYG V L+IPR I
Sbjct: 448 VLQMFNMVTPEELQDDDEYEEISEDIRDECSKYGKVLDLKIPRGI 492
>gi|225562835|gb|EEH11114.1| splicing factor u2af large subunit [Ajellomyces capsulatus G186AR]
Length = 571
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG V L++PRP N
Sbjct: 473 VLQLLNMVTTEELIDNDDYEEICDDVRDECSKYGEVVELKVPRPTGN 519
>gi|240279650|gb|EER43155.1| splicing factor u2af large subunit [Ajellomyces capsulatus H143]
gi|325092783|gb|EGC46093.1| splicing factor u2af large subunit [Ajellomyces capsulatus H88]
Length = 572
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/47 (59%), Positives = 38/47 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG V L++PRP N
Sbjct: 474 VLQLLNMVTTEELIDNDDYEEICDDVRDECSKYGEVVELKVPRPTGN 520
>gi|226478958|emb|CAX72974.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 520
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NM+ EL+D++EYEDI ED++ EC+KYG+VRSLEIPRPI +DVPG G
Sbjct: 419 PPTE--VLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIRGIDVPGVG 476
Query: 70 K 70
K
Sbjct: 477 K 477
>gi|119189253|ref|XP_001245233.1| hypothetical protein CIMG_04674 [Coccidioides immitis RS]
gi|392868136|gb|EAS33879.2| U2 snRNP auxilliary factor, large subunit, splicing factor
[Coccidioides immitis RS]
Length = 545
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D D+YE+IC+D+++EC+KYG + +++PRP
Sbjct: 447 VLQLLNMVTAEELMDNDDYEEICDDVRDECSKYGQILEMKVPRP 490
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Query: 10 PPLRF--SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--IENVDV 65
P +R+ +L L NMV P+EL D++EYEDI ED++EE +KYG V ++IPRP + +
Sbjct: 415 PTVRYPTRILELRNMVEPEELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANP 474
Query: 66 PGCGK 70
PG GK
Sbjct: 475 PGLGK 479
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Query: 10 PPLRF--SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--IENVDV 65
P +R+ +L L NMV P+EL D++EYEDI ED++EE +KYG V ++IPRP + +
Sbjct: 431 PTVRYPTRILELRNMVEPEELVDDEEYEDIIEDVREESSKYGEVTEVKIPRPSKTDEANP 490
Query: 66 PGCGK 70
PG GK
Sbjct: 491 PGLGK 495
>gi|170088030|ref|XP_001875238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650438|gb|EDR14679.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 370
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P +L +LNMVTPD+L D+ EY D+ ED+KEEC+ YG V L IPRP
Sbjct: 248 PATDSRILLMLNMVTPDDLTDDQEYGDLYEDVKEECSNYGAVEDLRIPRP 297
>gi|134113282|ref|XP_774666.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257310|gb|EAL20019.1| hypothetical protein CNBF3460 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 652
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ LLNMVTP+EL ++D+Y DI EDI EEC+KYG + + IPRP+
Sbjct: 495 VMLLLNMVTPEELYNDDDYNDIIEDINEECSKYGEIEGVRIPRPV 539
>gi|58268792|ref|XP_571552.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|57227787|gb|AAW44245.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 651
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ LLNMVTP+EL ++D+Y DI EDI EEC+KYG + + IPRP+
Sbjct: 494 VMLLLNMVTPEELYNDDDYNDIIEDINEECSKYGEIEGVRIPRPV 538
>gi|171684585|ref|XP_001907234.1| hypothetical protein [Podospora anserina S mat+]
gi|170942253|emb|CAP67905.1| unnamed protein product [Podospora anserina S mat+]
Length = 585
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVT DEL D D+YE+I +D++EEC K+G + SL+IPRP+
Sbjct: 487 VLQLLNMVTADELMDNDDYEEIRDDVQEECEKFGKILSLKIPRPV 531
>gi|390596686|gb|EIN06087.1| hypothetical protein PUNSTDRAFT_145447 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 602
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+L +L+MV P++L D+ EY DICED+KEEC K+G V L IPRP
Sbjct: 465 ILLMLSMVVPEDLVDDQEYADICEDVKEECEKFGAVEDLRIPRP 508
>gi|310793965|gb|EFQ29426.1| U2 snRNP auxilliary factor [Glomerella graminicola M1.001]
Length = 549
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVTP+EL D D+YE+I ED++EEC K+G V ++IPRP+
Sbjct: 451 VLQLLNMVTPEELMDNDDYEEIKEDVQEECAKFGTVLDVKIPRPV 495
>gi|449547880|gb|EMD38847.1| hypothetical protein CERSUDRAFT_81656 [Ceriporiopsis subvermispora
B]
Length = 476
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMV P+EL+D+ EY DI EDI EEC +YG V L IPRP++
Sbjct: 343 ILLMLNMVVPEELQDDQEYADIYEDITEECGRYGAVEDLRIPRPVK 388
>gi|358338608|dbj|GAA57078.1| splicing factor U2AF large subunit [Clonorchis sinensis]
Length = 518
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NM+ P EL+D++EYEDI ED++ EC+KYG+VRSLEIPRPI V+VPG G
Sbjct: 417 PPTE--VLCLMNMIDPAELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIRGVEVPGVG 474
Query: 70 K 70
K
Sbjct: 475 K 475
>gi|384939342|gb|AFI33276.1| splicing factor U2AF 65 kDa subunit isoform b [Macaca mulatta]
Length = 471
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I E++++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 373 VLCLMNMVLPEELLDDEEYEEIVEEVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 427
>gi|297798226|ref|XP_002866997.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
gi|297312833|gb|EFH43256.1| hypothetical protein ARALYDRAFT_490965 [Arabidopsis lyrata subsp.
lyrata]
Length = 567
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
+V+CL +VT DEL+D++EYEDI ED+++E K+G + ++ IPRP N + VPG GK L
Sbjct: 466 TVVCLTQVVTEDELRDDEEYEDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVPGLGKVFL 525
>gi|76154831|gb|AAX26240.2| SJCHGC03157 protein [Schistosoma japonicum]
Length = 258
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NM+ EL+D++EYEDI ED++ EC+KYG+VRSLEIPRPI +DVPG G
Sbjct: 157 PPTE--VLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIRGIDVPGVG 214
Query: 70 K 70
K
Sbjct: 215 K 215
>gi|384939340|gb|AFI33275.1| splicing factor U2AF 65 kDa subunit isoform a [Macaca mulatta]
Length = 475
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/55 (63%), Positives = 51/55 (92%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL D++EYE+I E++++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 377 VLCLMNMVLPEELLDDEEYEEIVEEVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 431
>gi|336368252|gb|EGN96595.1| hypothetical protein SERLA73DRAFT_93106 [Serpula lacrymans var.
lacrymans S7.3]
Length = 396
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+L +LNMVTPD+L D+ EY D+ ED+KEEC+ YG V L IPRP
Sbjct: 277 ILLMLNMVTPDDLTDDQEYGDLYEDVKEECSVYGAVEDLRIPRP 320
>gi|398403643|ref|XP_003853288.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
gi|339473170|gb|EGP88264.1| hypothetical protein MYCGRDRAFT_100024 [Zymoseptoria tritici
IPO323]
Length = 544
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VLCL+NM+TP+EL D DE ++I ED+KEEC KYG + +++PRP
Sbjct: 446 VLCLMNMITPEELMDADEADEILEDVKEECAKYGELMEVKMPRP 489
>gi|325191172|emb|CCA25959.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 553
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL L NMVTP+EL+DEDEY DI +DI+ EC +YG V ++ +PR E GK
Sbjct: 455 VLVLRNMVTPEELEDEDEYRDIMDDIRSECERYGRVTTIILPRAKEGYGDEALGK 509
>gi|156070797|gb|ABU45209.1| unknown [Solanum bulbocastanum]
Length = 558
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VLCL +V+ DELKD+D+Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 454 LATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGK 513
Query: 71 ATL 73
L
Sbjct: 514 VFL 516
>gi|291190480|ref|NP_001167275.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
gi|223648990|gb|ACN11253.1| Splicing factor U2AF 65 kDa subunit [Salmo salar]
Length = 474
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 47/55 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV +EL D++EYE+I ED+++EC KYG V+S+EIPRP++ ++VPG GK
Sbjct: 376 VLCLMNMVAVEELLDDEEYEEIVEDVRDECGKYGQVKSIEIPRPVDGLEVPGTGK 430
>gi|405121398|gb|AFR96167.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 655
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ LLNMVTP+EL ++D+Y DI EDI +EC+KYG + + IPRP+
Sbjct: 498 VMLLLNMVTPEELYNDDDYNDIIEDINDECSKYGEIEGVRIPRPV 542
>gi|346978171|gb|EGY21623.1| splicing factor U2AF 50 kDa subunit [Verticillium dahliae VdLs.17]
Length = 589
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVT DEL D ++YE+I ED++EEC KYG V +++PRP+
Sbjct: 466 VLQLLNMVTADELMDNEDYEEIVEDVQEECAKYGTVLEVKVPRPV 510
>gi|358059688|dbj|GAA94557.1| hypothetical protein E5Q_01209 [Mixia osmundae IAM 14324]
Length = 564
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 6 DRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
D P R L +LNMVTP+EL D+ +Y DI EDIK+EC+KYG V ++IPRPI+
Sbjct: 453 DETAPATR--CLQMLNMVTPEELVDDQDYADINEDIKDECSKYGEVIDVKIPRPIK 506
>gi|321260434|ref|XP_003194937.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Cryptococcus gattii WM276]
gi|317461409|gb|ADV23150.1| Splicing factor (U2 snRNP auxiliary factor large subunit), putative
[Cryptococcus gattii WM276]
Length = 654
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ LLNMVTP+EL ++D+Y DI EDI +EC+KYG + + IPRP+
Sbjct: 497 VMLLLNMVTPEELYNDDDYNDIIEDINDECSKYGEIEGVRIPRPV 541
>gi|9858779|gb|AAG01126.1|AF273333_11 BAC19.11 [Solanum lycopersicum]
Length = 532
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VLCL +V+ DELKD+D+Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 428 LATKVLCLTEVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGK 487
Query: 71 ATL 73
L
Sbjct: 488 VFL 490
>gi|302411252|ref|XP_003003459.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
gi|261357364|gb|EEY19792.1| splicing factor U2AF 65 kDa subunit [Verticillium albo-atrum
VaMs.102]
Length = 568
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVT DEL D ++YE+I ED++EEC KYG V +++PRP+
Sbjct: 470 VLQLLNMVTADELMDNEDYEEIVEDVQEECAKYGTVLEVKVPRPV 514
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL L NMVTPDELKD+ EY++I ED++EE K+G V SL IPR
Sbjct: 324 VLVLANMVTPDELKDDQEYQEIVEDVREEVAKFGEVLSLVIPR 366
>gi|188998293|gb|ACD67872.1| U2 snRNP auxiliary factor large subunit [Solanum melongena]
Length = 554
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L +LCL +V+ DELKD+D+Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 448 LATKILCLTQVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGK 507
Query: 71 ATL 73
L
Sbjct: 508 VFL 510
>gi|156070760|gb|ABU45175.1| unknown [Solanum melongena]
Length = 553
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L +LCL +V+ DELKD+D+Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 447 LATKILCLTQVVSVDELKDDDDYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGK 506
Query: 71 ATL 73
L
Sbjct: 507 VFL 509
>gi|345569109|gb|EGX51978.1| hypothetical protein AOL_s00043g712 [Arthrobotrys oligospora ATCC
24927]
Length = 569
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV-DVPGCGK 70
VL LLNMVT DEL D++EYE+I ED+ +ECNK+G + ++IPRP N G GK
Sbjct: 471 VLQLLNMVTADELLDQEEYEEILEDVTDECNKFGPIIDIKIPRPSGNQRAAAGVGK 526
>gi|301088364|ref|XP_002996880.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110854|gb|EEY68906.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 96
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 19 LLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
+ NMV+ DEL+D++EY D+ ED++EEC ++G V +EIPRP + +VPG G
Sbjct: 1 MANMVSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLG 51
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATL 73
VLCL + V+PDELKD+++YE+I +D+++EC+K+G + ++ IPRP + ++ PG GK L
Sbjct: 526 VLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFL 584
>gi|409081516|gb|EKM81875.1| hypothetical protein AGABI1DRAFT_70425 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 375
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMVTP++L ++DEY D+ +D+K EC+KYG + L IPRP++
Sbjct: 247 ILLMLNMVTPEDLHEDDEYGDLYDDVKAECSKYGELEDLRIPRPVK 292
>gi|449496757|ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
VLCL +VTP+EL ++++YEDI ED++ E K+G + ++ IPRP N PG GK L
Sbjct: 488 VLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKVFL 545
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATL 73
VLCL + V+PDELKD+++YE+I +D+++EC+K+G + ++ IPRP + ++ PG GK L
Sbjct: 511 VLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNLVNVVIPRPRPDGELCPGVGKVFL 569
>gi|449441167|ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
VLCL +VTP+EL ++++YEDI ED++ E K+G + ++ IPRP N PG GK L
Sbjct: 488 VLCLTQVVTPEELINDEDYEDIMEDMRGEGGKFGTLVNVVIPRPRPNEAAPGVGKVFL 545
>gi|296420976|ref|XP_002840043.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636253|emb|CAZ84234.1| unnamed protein product [Tuber melanosporum]
Length = 540
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D +EY++ICEDI++EC K+G + +++PRP
Sbjct: 442 VLQLLNMVTADELLDPEEYDEICEDIRDECQKFGSLVDMKVPRP 485
>gi|426196755|gb|EKV46683.1| hypothetical protein AGABI2DRAFT_206147 [Agaricus bisporus var.
bisporus H97]
Length = 558
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMVTP++L ++DEY D+ +D+K EC+KYG + L IPRP++
Sbjct: 430 ILLMLNMVTPEDLHEDDEYGDLYDDVKAECSKYGELEDLRIPRPVK 475
>gi|443731660|gb|ELU16702.1| hypothetical protein CAPTEDRAFT_155651 [Capitella teleta]
Length = 480
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/55 (74%), Positives = 50/55 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NMV P+EL+DE+EYEDI ED+KEEC+KYG V+SLEIPRPI+ V+VPG GK
Sbjct: 383 VLCLMNMVLPEELEDEEEYEDILEDVKEECSKYGFVKSLEIPRPIKGVEVPGVGK 437
>gi|194756144|ref|XP_001960339.1| GF13310 [Drosophila ananassae]
gi|190621637|gb|EDV37161.1| GF13310 [Drosophila ananassae]
Length = 434
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/57 (68%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP--GCGK 70
VLCLLNMV P+EL D++EYEDI DI++EC KYG VRSL+IPRPI D P GCGK
Sbjct: 334 VLCLLNMVLPEELLDDEEYEDIRTDIQQECAKYGDVRSLKIPRPIPKGDSPKRGCGK 390
>gi|350295506|gb|EGZ76483.1| hypothetical protein NEUTE2DRAFT_76972 [Neurospora tetrasperma FGSC
2509]
Length = 592
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLNMVT DEL D D+YE+I +D++EEC K+G + SL+IPRP
Sbjct: 494 VVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRP 537
>gi|336465212|gb|EGO53452.1| hypothetical protein NEUTE1DRAFT_92746 [Neurospora tetrasperma FGSC
2508]
Length = 584
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLNMVT DEL D D+YE+I +D++EEC K+G + SL+IPRP
Sbjct: 486 VVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRP 529
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLNMVT DEL D D+YE+I +D++EEC K+G + SL+IPRP
Sbjct: 496 VVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRP 539
>gi|85111663|ref|XP_964044.1| hypothetical protein NCU03039 [Neurospora crassa OR74A]
gi|28925805|gb|EAA34808.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 584
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLNMVT DEL D D+YE+I +D++EEC K+G + SL+IPRP
Sbjct: 486 VVQLLNMVTADELMDNDDYEEIRDDVQEECEKFGTIVSLKIPRP 529
>gi|226483519|emb|CAX74060.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
gi|226483521|emb|CAX74061.1| Splicing factor U2AF 65 kDa subunit [Schistosoma japonicum]
Length = 518
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NM+ EL+D++EYEDI ED++ EC+KYG+VRSLEIPRPI V+VPG G
Sbjct: 417 PPTE--VLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIPGVEVPGVG 474
Query: 70 K 70
K
Sbjct: 475 K 475
>gi|440633242|gb|ELR03161.1| hypothetical protein GMDG_05987 [Geomyces destructans 20631-21]
Length = 559
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 35/44 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT +EL D ++YE+I ED+KEEC KYG V ++IPRP
Sbjct: 461 VLQLLNMVTAEELIDNEDYEEILEDVKEECEKYGKVLDIKIPRP 504
>gi|256074204|ref|XP_002573416.1| splicing factor u2af large subunit [Schistosoma mansoni]
gi|238658595|emb|CAZ29648.1| splicing factor u2af large subunit, putative [Schistosoma mansoni]
Length = 521
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/61 (63%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
PP VLCL+NM+ EL+D++EYEDI ED++ EC+KYG+VRSLEIPRPI V+VPG G
Sbjct: 420 PPTE--VLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIPGVEVPGVG 477
Query: 70 K 70
K
Sbjct: 478 K 478
>gi|367042858|ref|XP_003651809.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
gi|346999071|gb|AEO65473.1| hypothetical protein THITE_2112508 [Thielavia terrestris NRRL 8126]
Length = 563
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL D D+YE+I +D+++EC K+G V SL+IPRP
Sbjct: 465 VLQLLNMVTADELMDNDDYEEIRDDVQDECEKFGTVLSLKIPRP 508
>gi|168028774|ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681881|gb|EDQ68304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 486
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
V+ L +VTP++L+D++EY++I ED+ EC KYG + + IPRP +VPG GK L
Sbjct: 389 VVALTEVVTPNQLEDDEEYQEIMEDMGTECGKYGTLVNCVIPRPRSGENVPGLGKVFL 446
>gi|238569827|ref|XP_002386737.1| hypothetical protein MPER_14917 [Moniliophthora perniciosa FA553]
gi|215439469|gb|EEB87667.1| hypothetical protein MPER_14917 [Moniliophthora perniciosa FA553]
Length = 163
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
+L +LNMVTPD+L ++DEY D+ ED+KEEC+ +G + L IPRPI+
Sbjct: 76 ILLMLNMVTPDDLVNDDEYGDLYEDVKEECSSFGKLEDLRIPRPIKK 122
>gi|331243454|ref|XP_003334370.1| splicing factor U2AF subunit [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 600
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
VL +LNMV +EL D+ EY +I EDI++EC KYG + + IPRPI+N
Sbjct: 472 VLQMLNMVNQEELVDDQEYGEILEDIRDECGKYGKIEGVRIPRPIKN 518
>gi|156070781|gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
Length = 557
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VLCL V+ DEL D+D+Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 456 LATKVLCLTQAVSVDELNDDDDYQDILEDMRTECGKFGALLNVVIPRPNPNGEPTPGIGK 515
>gi|388520789|gb|AFK48456.1| unknown [Lotus japonicus]
Length = 527
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
VLCL +T DEL D EYE+I ED+++EC K+G + ++ IPRP + + PG GK L
Sbjct: 427 VLCLTEAITTDELMDNGEYEEIVEDMRDECGKFGTLMNVVIPRPNPSGEQTPGIGKVFL 485
>gi|403175591|ref|XP_003888994.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171670|gb|EHS64431.1| hypothetical protein PGTG_22302 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 713
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
VL +LNMV +EL D+ EY +I EDI++EC KYG + + IPRPI+N
Sbjct: 585 VLQMLNMVNQEELVDDQEYGEILEDIRDECGKYGKIEGVRIPRPIKN 631
>gi|156070782|gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
Length = 506
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VLCL V DEL D+D+Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 401 LATKVLCLTEAVRLDELNDDDDYQDILEDMRTECGKFGALLNVIIPRPNPNGEPTPGVGK 460
Query: 71 ATL 73
L
Sbjct: 461 VFL 463
>gi|212539738|ref|XP_002150024.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067323|gb|EEA21415.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 556
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL + ++YE+I ED+++EC+KYG V L+IPRP
Sbjct: 453 VLQLLNMVTADELINNEDYEEILEDVQDECSKYGQVLDLKIPRP 496
>gi|242803779|ref|XP_002484243.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
gi|218717588|gb|EED17009.1| splicing factor u2af large subunit [Talaromyces stipitatus ATCC
10500]
Length = 543
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+L LLNMVT DEL + D+YE+I ED+++EC+KYG V ++IPRP
Sbjct: 445 ILQLLNMVTADELINNDDYEEILEDVQDECSKYGQVLDVKIPRP 488
>gi|212539736|ref|XP_002150023.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
gi|210067322|gb|EEA21414.1| splicing factor u2af large subunit [Talaromyces marneffei ATCC
18224]
Length = 551
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL LLNMVT DEL + ++YE+I ED+++EC+KYG V L+IPRP
Sbjct: 453 VLQLLNMVTADELINNEDYEEILEDVQDECSKYGQVLDLKIPRP 496
>gi|406699650|gb|EKD02849.1| splicing factor (U2 snRNP auxiliary factor large subunit)
[Trichosporon asahii var. asahii CBS 8904]
Length = 487
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 6 DRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
D P R V+ +LNMV DEL D+ +Y DI EDI++EC+K+G V + IPRP+
Sbjct: 340 DEPAPATR--VILMLNMVGADELYDDQDYADILEDIRDECSKFGEVEGVRIPRPV 392
>gi|60599450|gb|AAX26270.1| unknown [Schistosoma japonicum]
Length = 156
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL+NM+ EL+D++EYEDI ED++ EC+KYG+VRSLEIPRPI V+VPG GK
Sbjct: 59 VLCLMNMIETSELEDDEEYEDIVEDVRAECSKYGVVRSLEIPRPIPGVEVPGVGK 113
>gi|409040470|gb|EKM49957.1| hypothetical protein PHACADRAFT_264412 [Phanerochaete carnosa
HHB-10118-sp]
Length = 575
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
+L +LNMV P++L D+ EY DI ED+K+EC K+G + L IPRP++
Sbjct: 443 ILLMLNMVVPEDLNDDQEYADIYEDVKDECEKHGPIEDLRIPRPVK 488
>gi|357156009|ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 576
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +V+ DEL+D++EYEDI ED++EE KYG + IPRP VPG GK L
Sbjct: 476 VVCLTQVVSADELRDDEEYEDILEDMREEGRKYGNLVKAVIPRPDPSGAPVPGVGKVFL 534
>gi|432095995|gb|ELK26906.1| WD40 repeat-containing protein SMU1 [Myotis davidii]
Length = 579
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 44/49 (89%)
Query: 22 MVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
MV P+EL D++EYE+I ED+++EC+ YG+V+++EIPRP++ +++PGCGK
Sbjct: 1 MVLPEELLDDEEYEEIVEDVRDECSNYGLVKAIEIPRPVDGIELPGCGK 49
>gi|224077136|ref|XP_002305148.1| predicted protein [Populus trichocarpa]
gi|222848112|gb|EEE85659.1| predicted protein [Populus trichocarpa]
Length = 296
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
VLCL +T + L D++EYE+I ED++EEC K+G + ++ IPRP +N + +PG GK L
Sbjct: 196 VLCLTEAITMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPSQNEEKMPGAGKVFL 254
>gi|302796203|ref|XP_002979864.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
gi|300152624|gb|EFJ19266.1| hypothetical protein SELMODRAFT_153568 [Selaginella moellendorffii]
Length = 325
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
V+CL N V+ + L+DE EY +I ED+KEEC KYG + S+EIPR PG GK L
Sbjct: 229 VVCLCNAVSEEMLRDEKEYAEIIEDMKEECGKYGPLVSVEIPR---GDGAPGLGKVFL 283
>gi|115495227|ref|NP_001070127.1| serine/threonine-protein kinase Kist [Danio rerio]
gi|115313546|gb|AAI24287.1| Zgc:153241 [Danio rerio]
gi|182890586|gb|AAI64787.1| Zgc:153241 protein [Danio rerio]
Length = 410
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ L +EDEYEDI ED+KEEC KYG V SL IP+ EN PG G+
Sbjct: 313 VLRLLNVIDDSHLYNEDEYEDIIEDMKEECQKYGTVVSLLIPK--EN---PGKGQ 362
>gi|168056046|ref|XP_001780033.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668531|gb|EDQ55136.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 536
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 22 MVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
+VTP++L+D++EY++I ED++ EC KYG + ++ IPRP VPG GK L
Sbjct: 443 VVTPNQLEDDEEYQEILEDMRMECGKYGNLLNVVIPRPRAGETVPGLGKVFL 494
>gi|156070776|gb|ABU45190.1| unknown [Capsicum frutescens]
Length = 551
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VLCL +V+ DEL D+D+Y+DI ED++ EC K+G + ++ IPRP + + PG GK
Sbjct: 447 LATKVLCLTQVVSVDELNDDDDYQDILEDMRVECGKFGSLLNVVIPRPNPSGEPTPGLGK 506
Query: 71 ATL 73
L
Sbjct: 507 VFL 509
>gi|302813497|ref|XP_002988434.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
gi|300143836|gb|EFJ10524.1| hypothetical protein SELMODRAFT_24180 [Selaginella moellendorffii]
Length = 339
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
V+CL N V+ + L+DE EY +I ED+KEEC KYG + S+EIPR PG GK L
Sbjct: 245 VVCLCNAVSEEMLRDEKEYAEIIEDMKEECGKYGPLVSVEIPR---GDGAPGLGKVFL 299
>gi|226532558|ref|NP_001140768.1| uncharacterized protein LOC100272843 [Zea mays]
gi|194701008|gb|ACF84588.1| unknown [Zea mays]
gi|414591744|tpg|DAA42315.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 583
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +VT DEL+D++EY+DI ED++EE +KYG + + IPRP V G GK L
Sbjct: 484 VVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKVFL 542
>gi|414591747|tpg|DAA42318.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 590
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +VT DEL+D++EY+DI ED++EE +KYG + + IPRP V G GK L
Sbjct: 491 VVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYGNLVKVAIPRPDPSGAPVAGVGKVFL 549
>gi|328766440|gb|EGF76494.1| hypothetical protein BATDEDRAFT_21058 [Batrachochytrium
dendrobatidis JAM81]
Length = 551
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLNMV ++L +++Y+DI DI+EEC K+G + + IPRP+ G GK
Sbjct: 454 VLLLLNMVVSEDLVSDEDYQDILLDIQEECEKFGTILDIAIPRPVSGQSNAGVGK 508
>gi|452841884|gb|EME43820.1| hypothetical protein DOTSEDRAFT_71600 [Dothistroma septosporum
NZE10]
Length = 433
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL L+NM+TP+EL D DE ++I ED+KEEC KYG + +++PRP
Sbjct: 335 VLSLMNMITPEELMDPDEADEILEDVKEECAKYGPLLDVKMPRP 378
>gi|359497129|ref|XP_003635431.1| PREDICTED: splicing factor U2af large subunit B-like, partial
[Vitis vinifera]
Length = 238
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
VLCL ++ DEL+D++ YE+I ED+++E K+G + + IPRP N D +PG GK L
Sbjct: 138 VLCLTEVINIDELRDDEAYEEILEDMRDEGGKFGALVHVVIPRPSPNGDLIPGVGKVFL 196
>gi|168030966|ref|XP_001767993.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680835|gb|EDQ67268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGC 68
P V+CL +V+ +LKD+ E+++I ED+KEEC KYG + ++ IPRP + DVPG
Sbjct: 393 PETATKVICLSQVVSIVDLKDDVEFDEIVEDMKEECGKYGSLLNVVIPRPSYDEEDVPGI 452
Query: 69 G 69
G
Sbjct: 453 G 453
>gi|193848546|gb|ACF22733.1| U2AF large subunit [Brachypodium distachyon]
Length = 569
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPG 67
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP + + V G
Sbjct: 462 VGALPTKVICLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVVIPRPHPSGEPVAG 521
Query: 68 CGKATL 73
GK L
Sbjct: 522 VGKVFL 527
>gi|12850652|dbj|BAB28802.1| unnamed protein product [Mus musculus]
Length = 419
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 371
>gi|297736736|emb|CBI25913.3| unnamed protein product [Vitis vinifera]
Length = 6467
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
VLCL ++ DEL+D++ YE+I ED+++E K+G + + IPRP N D +PG GK L
Sbjct: 6367 VLCLTEVINIDELRDDEAYEEILEDMRDEGGKFGALVHVVIPRPSPNGDLIPGVGKVFL 6425
>gi|40254330|ref|NP_034763.3| serine/threonine-protein kinase Kist [Mus musculus]
gi|57015387|sp|P97343.3|UHMK1_MOUSE RecName: Full=Serine/threonine-protein kinase Kist; AltName:
Full=Kinase interacting with stathmin; AltName: Full=PAM
COOH-terminal interactor protein 2; Short=P-CIP2;
AltName: Full=U2AF homology motif kinase 1
gi|27501712|gb|AAO13515.1| KIS kinase [Mus musculus]
gi|37194893|gb|AAH58732.1| U2AF homology motif (UHM) kinase 1 [Mus musculus]
Length = 419
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 371
>gi|8393668|ref|NP_058989.1| serine/threonine-protein kinase Kist [Rattus norvegicus]
gi|24211854|sp|Q63285.1|UHMK1_RAT RecName: Full=Serine/threonine-protein kinase Kist; AltName:
Full=Kinase interacting with stathmin; AltName: Full=PAM
COOH-terminal interactor protein 2; Short=P-CIP2;
AltName: Full=U2AF homology motif kinase 1
gi|1403532|emb|CAA67021.1| KIS [Rattus norvegicus]
gi|5821768|gb|AAC53031.2| PAM COOH-terminal interactor protein 2 [Rattus norvegicus]
gi|149058100|gb|EDM09257.1| rCG46339, isoform CRA_b [Rattus norvegicus]
Length = 419
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 371
>gi|21726713|emb|CAA71714.2| KIS protein kinase [Mus musculus]
gi|117616788|gb|ABK42412.1| Kist [synthetic construct]
Length = 414
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 371
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL---EIPRPIENVDV-PGCGKA 71
VLCL + V+PDELKD+++YE+I +D+++EC+K+G + +L IPRP + ++ PG GK
Sbjct: 524 VLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNICNLVNVVIPRPRPDGELCPGVGKV 583
Query: 72 TL 73
L
Sbjct: 584 FL 585
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 4/62 (6%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL---EIPRPIENVDV-PGCGKA 71
VLCL + V+PDELKD+++YE+I +D+++EC+K+G + +L IPRP + ++ PG GK
Sbjct: 526 VLCLTHAVSPDELKDDEDYEEILDDMRQECSKFGNICNLVNVVIPRPRPDGELCPGVGKV 585
Query: 72 TL 73
L
Sbjct: 586 FL 587
>gi|388580158|gb|EIM20475.1| hypothetical protein WALSEDRAFT_55089 [Wallemia sebi CBS 633.66]
Length = 391
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 37/44 (84%)
Query: 13 RFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
R +VL LLNMVT +ELKD+ +Y++ICEDI+EEC++YG + ++I
Sbjct: 244 RTNVLLLLNMVTAEELKDDLDYQEICEDIQEECSQYGEIIKIKI 287
>gi|344250069|gb|EGW06173.1| Serine/threonine-protein kinase Kist [Cricetulus griseus]
Length = 375
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 278 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 327
>gi|293354575|ref|XP_574033.2| PREDICTED: serine/threonine-protein kinase Kist-like [Rattus
norvegicus]
Length = 419
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 322 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 371
>gi|15234495|ref|NP_195387.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|75318082|sp|O23212.2|U2A2A_ARATH RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|18087531|gb|AAL58899.1|AF462805_1 At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|4006898|emb|CAB16828.1| splicing factor-like protein [Arabidopsis thaliana]
gi|7270617|emb|CAB80335.1| splicing factor-like protein [Arabidopsis thaliana]
gi|23506119|gb|AAN28919.1| At4g35590/C7A10_670 [Arabidopsis thaliana]
gi|24030414|gb|AAN41365.1| putative splicing factor [Arabidopsis thaliana]
gi|332661287|gb|AEE86687.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 573
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
+V+CL +VT DEL+D++EY DI ED+++E K+G + ++ IPRP N + V G GK L
Sbjct: 472 TVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFL 531
>gi|334187224|ref|NP_001190937.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661290|gb|AEE86690.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 551
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
+V+CL +VT DEL+D++EY DI ED+++E K+G + ++ IPRP N + V G GK L
Sbjct: 450 TVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFGALTNVVIPRPSPNGEPVAGLGKVFL 509
>gi|26326137|dbj|BAC26812.1| unnamed protein product [Mus musculus]
Length = 330
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 233 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 282
>gi|325179530|emb|CCA13927.1| splicing factor U2af large subunit putative [Albugo laibachii Nc14]
Length = 833
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 40/54 (74%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
VL + NMV+ DELK+++E+ D+ ED++EEC ++G + +L+IPR + ++ G G
Sbjct: 735 VLRMANMVSEDELKNDEEFADLKEDVEEECKRFGTIIALDIPRSQDGEEIAGTG 788
>gi|223950169|gb|ACN29168.1| unknown [Zea mays]
gi|413920349|gb|AFW60281.1| splicing factor U2AF subunit [Zea mays]
Length = 594
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +VT DEL+D++EY DI ED++EE KYG + + IPRP + V G GK L
Sbjct: 495 VVCLTQVVTADELRDDEEYNDIVEDMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKVFL 553
>gi|226497766|ref|NP_001152419.1| LOC100286059 [Zea mays]
gi|195656099|gb|ACG47517.1| splicing factor U2AF 65 kDa subunit [Zea mays]
Length = 596
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +VT DEL+D++EY DI ED++EE KYG + + IPRP + V G GK L
Sbjct: 497 VVCLTQVVTADELRDDEEYNDIVEDMREEGRKYGNLVKVVIPRPDPSDAPVAGVGKVFL 555
>gi|432855875|ref|XP_004068316.1| PREDICTED: serine/threonine-protein kinase Kist-like [Oryzias
latipes]
Length = 435
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ L +E+EYEDI ED+KEEC KYG V SL IP+ EN PG G+
Sbjct: 338 VLRLLNLIDDSHLHNEEEYEDIMEDMKEECQKYGSVVSLLIPK--EN---PGKGQ 387
>gi|354487456|ref|XP_003505889.1| PREDICTED: serine/threonine-protein kinase Kist-like [Cricetulus
griseus]
Length = 461
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 364 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 413
>gi|357155772|ref|XP_003577233.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 446
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPG 67
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP + + V G
Sbjct: 339 VGALPTKVICLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVVIPRPHPSGEPVAG 398
Query: 68 CGKATL 73
GK L
Sbjct: 399 VGKVFL 404
>gi|164657478|ref|XP_001729865.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
gi|159103759|gb|EDP42651.1| hypothetical protein MGL_2851 [Malassezia globosa CBS 7966]
Length = 473
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
+ +LNMVT DEL D+ EY+DI ED+ EC+++G V S+ IPRP+
Sbjct: 359 MLMLNMVTTDELLDDTEYQDIKEDVHSECSRHGTVTSVYIPRPL 402
>gi|406867695|gb|EKD20733.1| U2 snRNP auxilliary factor [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 613
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 17/61 (27%)
Query: 16 VLCLLNMVTPDELKDEDEYE-----------------DICEDIKEECNKYGIVRSLEIPR 58
VL LLNMVTP+EL D ++YE +ICED+KEEC KYG V +++PR
Sbjct: 498 VLQLLNMVTPEELIDNEDYEGTILLTTLIQSLLTMYPEICEDVKEECEKYGKVLDMKVPR 557
Query: 59 P 59
P
Sbjct: 558 P 558
>gi|453082700|gb|EMF10747.1| hypothetical protein SEPMUDRAFT_48483 [Mycosphaerella populorum
SO2202]
Length = 432
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VL L+NM+TP+EL D D+ ++I ED+KEEC KYG + +++PRP
Sbjct: 334 VLALMNMITPEELMDPDDADEILEDVKEECAKYGPLLEVKMPRP 377
>gi|149058099|gb|EDM09256.1| rCG46339, isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 154 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 203
>gi|338762830|gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
Length = 570
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VLCL +V+ DEL+D+++Y DI ED++ EC K+ +V +L IPRP D PG GK
Sbjct: 467 LATKVLCLTQVVSADELRDDEDYADILEDMRLECGKFTLV-NLVIPRPSPTGDPTPGVGK 525
Query: 71 ATL 73
L
Sbjct: 526 VFL 528
>gi|392572624|gb|EIW65769.1| hypothetical protein TREMEDRAFT_41238 [Tremella mesenterica DSM
1558]
Length = 596
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ LLNMVT DEL D+ EY++I EDI EC+++G + + +PRP+
Sbjct: 452 VMLLLNMVTADELYDDQEYQEILEDITSECSRFGEIEGVRVPRPV 496
>gi|357470349|ref|XP_003605459.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355506514|gb|AES87656.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 634
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 41/52 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPG 67
V+CL N V P+ELK+++++E+I +D+++EC+K+G + ++ IPRP + D+ G
Sbjct: 534 VVCLTNAVAPEELKEDEDFEEIIDDMRQECSKFGSLVNVVIPRPQPDGDLSG 585
>gi|291397536|ref|XP_002715130.1| PREDICTED: kinase interacting stathmin [Oryctolagus cuniculus]
Length = 419
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++E+EYEDI ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 322 VLRLLNVLDDDYLENEEEYEDIVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 371
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 14/70 (20%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------------IE 61
V+CL + V+ DELKD+++YE+I +D+++EC+K+G + ++ IPRP +E
Sbjct: 500 VVCLTHAVSSDELKDDEDYEEILDDMRQECSKFGTLVNVVIPRPPSDGEPAAGVGKVFLE 559
Query: 62 NVDVPGCGKA 71
VD+ G KA
Sbjct: 560 YVDIDGATKA 569
>gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster]
Length = 449
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
LCLLNMV P+EL D++E+EDI DIK+EC K+G VRS++IPRPI GCGK
Sbjct: 352 LCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQFPKRGCGK 405
>gi|413920211|gb|AFW60143.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 367
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------- 59
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP
Sbjct: 260 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVG 319
Query: 60 -----IENVDVPGCGKA 71
+E D+ G KA
Sbjct: 320 VGKVFLEYADIDGAAKA 336
>gi|115486373|ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|108864607|gb|ABA94914.2| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa Japonica Group]
gi|222616290|gb|EEE52422.1| hypothetical protein OsJ_34542 [Oryza sativa Japonica Group]
Length = 574
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +V+PDEL+D++EYEDI +D++EE +YG + + IPRP V G G+ L
Sbjct: 474 VVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFL 532
>gi|24659166|ref|NP_611769.2| large subunit 2 [Drosophila melanogaster]
gi|7291545|gb|AAF46969.1| large subunit 2 [Drosophila melanogaster]
gi|201066057|gb|ACH92438.1| FI08027p [Drosophila melanogaster]
Length = 449
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
LCLLNMV P+EL D++E+EDI DIK+EC K+G VRS++IPRPI GCGK
Sbjct: 352 LCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQFPKRGCGK 405
>gi|122245120|sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|68036764|gb|AAY84880.1| U2AF large subunit [Triticum aestivum]
Length = 543
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPG 67
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP + + V G
Sbjct: 434 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVVIPRPHPSGEPVSG 493
Query: 68 CGKATL 73
GK L
Sbjct: 494 VGKVFL 499
>gi|393236224|gb|EJD43774.1| hypothetical protein AURDEDRAFT_137718 [Auricularia delicata
TFB-10046 SS5]
Length = 389
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+L +LNMV P++L D++E+ ++ ED+KEEC K+G V L IPRP
Sbjct: 256 ILLMLNMVVPEDLVDDEEFAELYEDVKEECAKFGAVEDLRIPRP 299
>gi|148707213|gb|EDL39160.1| U2AF homology motif (UHM) kinase 1 [Mus musculus]
Length = 232
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L++EDEYED+ ED+KEEC KYG V SL +P+ EN PG G+
Sbjct: 135 VLRLLNVLDDDYLENEDEYEDVVEDVKEECQKYGPVVSLLVPK--EN---PGRGQ 184
>gi|242069419|ref|XP_002449986.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
gi|241935829|gb|EES08974.1| hypothetical protein SORBIDRAFT_05g026740 [Sorghum bicolor]
Length = 545
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP V G
Sbjct: 438 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGTLVKVIIPRPDPSGQPVAG 497
Query: 68 CGKATL 73
GK L
Sbjct: 498 VGKVFL 503
>gi|413920210|gb|AFW60142.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 364
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------- 59
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP
Sbjct: 257 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVG 316
Query: 60 -----IENVDVPGCGKA 71
+E D+ G KA
Sbjct: 317 VGKVFLEYADIDGAAKA 333
>gi|357446501|ref|XP_003593528.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355482576|gb|AES63779.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 593
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGKATL 73
VLCL VT ++L D EYE+I ED+++EC K+G + ++ IPRP N ++ G GK L
Sbjct: 493 VLCLTEAVTTEQLTDNGEYEEILEDMRDECRKFGTLVNVVIPRPNPNGELSTGIGKVFL 551
>gi|452979953|gb|EME79715.1| hypothetical protein MYCFIDRAFT_81194 [Pseudocercospora fijiensis
CIRAD86]
Length = 552
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
VLCL+NM+TP+EL D DE ++I D+KEE +KYG + +++PRP
Sbjct: 454 VLCLMNMITPEELMDADEADEILVDVKEEVSKYGPLLDVKMPRP 497
>gi|115486631|ref|NP_001068459.1| Os11g0682300 [Oryza sativa Japonica Group]
gi|113645681|dbj|BAF28822.1| Os11g0682300, partial [Oryza sativa Japonica Group]
Length = 378
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
V L V+CL +V+ DELKD++EYEDI ED++ E KYG + + IPRP + V G
Sbjct: 271 VGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAG 330
Query: 68 CGKATL 73
GK L
Sbjct: 331 VGKVFL 336
>gi|47215490|emb|CAG01598.1| unnamed protein product [Tetraodon nigroviridis]
Length = 463
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL L+N++ D L +++EYEDI +D+KEEC KYG V SL IPR EN PG G+
Sbjct: 369 VLRLINLIDDDHLNNDEEYEDIMDDMKEECQKYGSVVSLLIPR--EN---PGKGQ 418
>gi|59808930|gb|AAH89996.1| U2af2 protein, partial [Rattus norvegicus]
Length = 88
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 32/34 (94%)
Query: 37 ICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
I ED+++EC+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 11 IVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGK 44
>gi|108864648|gb|ABG22574.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
Length = 366
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
V L V+CL +V+ DELKD++EYEDI ED++ E KYG + + IPRP + V G
Sbjct: 259 VGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAG 318
Query: 68 CGKATL 73
GK L
Sbjct: 319 VGKVFL 324
>gi|75338884|sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
subunit B; AltName: Full=U2 small nuclear
ribonucleoprotein auxiliary factor large subunit B;
Short=U2 snRNP auxiliary factor large subunit B
gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana
plumbaginifolia]
Length = 573
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L VL L +++ DEL D+++Y+DI ED++ EC K+G + ++ IPRP N + PG GK
Sbjct: 469 LATKVLSLTEVISADELNDDEDYQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGK 528
Query: 71 ATL 73
L
Sbjct: 529 VFL 531
>gi|218186084|gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
Length = 574
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
V+CL +++PDEL+D++EYEDI +D++EE +YG + + IPRP V G G+ L
Sbjct: 474 VVCLTQVISPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFL 532
>gi|195585954|ref|XP_002082743.1| GD25073 [Drosophila simulans]
gi|194194752|gb|EDX08328.1| GD25073 [Drosophila simulans]
Length = 445
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
LCLLNMV P+EL D++E+EDI DIK+EC K+G VRS++IPRPI GCGK
Sbjct: 348 LCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGPFPKRGCGK 401
>gi|255080772|ref|XP_002503959.1| predicted protein [Micromonas sp. RCC299]
gi|226519226|gb|ACO65217.1| predicted protein [Micromonas sp. RCC299]
Length = 332
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
P+ V+CL N+VT +L E+EY+D+CED+ +EC+K G V L IPR
Sbjct: 228 PVESCVVCLGNLVTESDLVTEEEYKDVCEDVLQECSKSGQVIELRIPR 275
>gi|195346998|ref|XP_002040041.1| GM15574 [Drosophila sechellia]
gi|194135390|gb|EDW56906.1| GM15574 [Drosophila sechellia]
Length = 445
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/54 (62%), Positives = 42/54 (77%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
LCLLNMV P+EL D++E+EDI DIK+EC K+G VRS++IPRPI GCGK
Sbjct: 348 LCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGPFPKRGCGK 401
>gi|363736469|ref|XP_422213.3| PREDICTED: serine/threonine-protein kinase Kist [Gallus gallus]
Length = 388
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN+++ L+ E+EYEDI EDI+EEC KYG V SL IP+ EN PG G+
Sbjct: 291 VLRLLNVLSDASLQSEEEYEDILEDIREECQKYGPVVSLLIPK--EN---PGKGQ 340
>gi|413920212|gb|AFW60144.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 502
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP V G
Sbjct: 432 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVG 491
Query: 68 CGKATL 73
GK +L
Sbjct: 492 VGKVSL 497
>gi|212723502|ref|NP_001131562.1| uncharacterized protein LOC100192903 [Zea mays]
gi|194691860|gb|ACF80014.1| unknown [Zea mays]
gi|195646366|gb|ACG42651.1| splicing factor U2AF 65 kDa subunit [Zea mays]
gi|413920213|gb|AFW60145.1| Splicing factor U2AF subunit [Zea mays]
Length = 539
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------- 59
V L V+CL +VT DELKD++EYEDI ED++ E KYG + + IPRP
Sbjct: 432 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKYGNLVKVIIPRPDPSGQPVVG 491
Query: 60 -----IENVDVPGCGKA 71
+E D+ G KA
Sbjct: 492 VGKVFLEYADIDGAAKA 508
>gi|302813365|ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
gi|300143770|gb|EFJ10458.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
Length = 353
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL V EL +++++++I ED+++EC K+G V L IPRP + +V G GK
Sbjct: 254 VLCLKEAVLEAELIEDEQFDEILEDMRDECGKFGTVLHLVIPRPSQAAEVDGVGK 308
>gi|410930137|ref|XP_003978455.1| PREDICTED: serine/threonine-protein kinase Kist-like [Takifugu
rubripes]
Length = 433
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL L+N++ L +++EYEDI +D+KEEC KYG V SL IPR EN PG G+
Sbjct: 336 VLRLINLIDDSHLNNDEEYEDIMDDMKEECQKYGSVVSLLIPR--EN---PGKGQ 385
>gi|402223467|gb|EJU03531.1| hypothetical protein DACRYDRAFT_77158 [Dacryopinax sp. DJM-731 SS1]
Length = 392
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 4 PWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI--E 61
P D PP +L LLNMVT +EL + +YEDI ED++EE ++G V ++IPRP E
Sbjct: 271 PVDNTNPP--SPILLLLNMVTAEELLQDQDYEDILEDVREEMGRFGPVIDIKIPRPQRRE 328
Query: 62 NVDVPG 67
N +PG
Sbjct: 329 NRWIPG 334
>gi|356517814|ref|XP_003527581.1| PREDICTED: splicing factor U2af large subunit A-like [Glycine max]
Length = 605
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 14/70 (20%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------------IE 61
V+CL + V+ DELKD+++Y++I +D+++EC+K+G + ++ IPRP +E
Sbjct: 505 VVCLTHAVSSDELKDDEDYDEILDDMRQECSKFGTLVNVVIPRPPPDGEPAAGVGKVFLE 564
Query: 62 NVDVPGCGKA 71
VD+ G KA
Sbjct: 565 YVDIDGATKA 574
>gi|302795921|ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
gi|300152483|gb|EFJ19125.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
Length = 360
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VLCL V EL +++++++I ED+++EC K+G V L IPRP + +V G GK
Sbjct: 261 VLCLKEAVLEAELIEDEQFDEILEDMRDECGKFGTVLHLVIPRPSQAAEVDGVGK 315
>gi|297735185|emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L V+CL +V DEL+D++ YEDI ED++ E K+G + ++ IPRP N + PG GK
Sbjct: 289 LATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGK 348
Query: 71 ATL 73
L
Sbjct: 349 VFL 351
>gi|122232770|sp|Q2QZL4.2|U2A2B_ORYSJ RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|108864649|gb|ABA95281.2| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|222616418|gb|EEE52550.1| hypothetical protein OsJ_34796 [Oryza sativa Japonica Group]
Length = 548
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
V L V+CL +V+ DELKD++EYEDI ED++ E KYG + + IPRP + V G
Sbjct: 441 VGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLEAGKYGNLIKVVIPRPDPSGLPVAG 500
Query: 68 CGKATL 73
GK L
Sbjct: 501 VGKVFL 506
>gi|218191627|gb|EEC74054.1| hypothetical protein OsI_09051 [Oryza sativa Indica Group]
Length = 548
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPG 67
V L V+CL +V+ DELKD++EYEDI ED++ E KYG + + IPRP + V G
Sbjct: 441 VGALPTKVVCLTQVVSADELKDDEEYEDIMEDMRLESGKYGNLIKVVIPRPDPSGLPVAG 500
Query: 68 CGKATL 73
GK L
Sbjct: 501 VGKVFL 506
>gi|425773483|gb|EKV11835.1| Splicing factor u2af large subunit [Penicillium digitatum Pd1]
Length = 585
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLNMVT DEL ++++YE+I ED+ +EC+K+G + ++IPR
Sbjct: 493 VLQLLNMVTLDELLNDEDYEEIMEDVSDECSKFGTILGIKIPR 535
>gi|425775779|gb|EKV14031.1| Splicing factor u2af large subunit [Penicillium digitatum PHI26]
Length = 585
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 35/43 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLNMVT DEL ++++YE+I ED+ +EC+K+G + ++IPR
Sbjct: 493 VLQLLNMVTLDELLNDEDYEEIMEDVSDECSKFGTILGIKIPR 535
>gi|359476715|ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L V+CL +V DEL+D++ YEDI ED++ E K+G + ++ IPRP N + PG GK
Sbjct: 464 LATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGK 523
Query: 71 ATL 73
L
Sbjct: 524 VFL 526
>gi|147840634|emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
L V+CL +V DEL+D++ YEDI ED++ E K+G + ++ IPRP N + PG GK
Sbjct: 461 LATKVVCLTQVVNADELQDDEAYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGK 520
Query: 71 ATL 73
L
Sbjct: 521 VFL 523
>gi|449268165|gb|EMC79035.1| Serine/threonine-protein kinase Kist, partial [Columba livia]
Length = 331
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN+++ L+ E+EYEDI EDI+EEC KYG V SL IP+ EN PG G+
Sbjct: 234 VLRLLNVLSDASLQCEEEYEDILEDIREECQKYGPVVSLLIPK--EN---PGKGQ 283
>gi|297840477|ref|XP_002888120.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
gi|297333961|gb|EFH64379.1| hypothetical protein ARALYDRAFT_475241 [Arabidopsis lyrata subsp.
lyrata]
Length = 589
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
++CL +VT D+L+D++EY DI ED+++E K+G + ++ IPRP + D PG GK L
Sbjct: 489 IVCLTQVVTADDLRDDEEYADIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFL 547
>gi|255073589|ref|XP_002500469.1| RNA binding protein [Micromonas sp. RCC299]
gi|226515732|gb|ACO61727.1| RNA binding protein [Micromonas sp. RCC299]
Length = 489
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 3 PPWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--I 60
PP P R V+ L M+ +EL+D+ EY +I ED++EEC K+G + S+ IPRP
Sbjct: 379 PPPPSEHPASR--VVSLTEMLDVEELRDDVEYGEIMEDMREECGKFGRIESIVIPRPGDA 436
Query: 61 ENVDVPGCGK 70
+ VPG GK
Sbjct: 437 DGAAVPGLGK 446
>gi|303273844|ref|XP_003056274.1| RNA binding protein [Micromonas pusilla CCMP1545]
gi|226462358|gb|EEH59650.1| RNA binding protein [Micromonas pusilla CCMP1545]
Length = 564
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE---NVDVPGCGK 70
VL L +M+ ++L+D+ EY +I ED++EEC K+G+V + IPRP + VPG GK
Sbjct: 463 VLSLNDMLDVEDLRDDVEYGEITEDMREECGKHGVVLEVRIPRPAAAGGDEIVPGLGK 520
>gi|389745686|gb|EIM86867.1| hypothetical protein STEHIDRAFT_57258 [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+L +LNMVTP++L D+ EY D+ EDI+EE YG V + IPRP
Sbjct: 290 ILLMLNMVTPEDLIDDSEYADLLEDIREEVANYGDVDDVRIPRP 333
>gi|298713809|emb|CBJ27181.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1141
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
V+ L NMV +EL D+ EY +I D+ EEC +YG V+S E+PRP + +V G G+
Sbjct: 953 VVRLSNMVEVEELADDTEYAEIKGDVVEECEQYGKVKSAEVPRPEDGKEVLGLGE 1007
>gi|30696485|ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName: Full=Splicing factor U2af large subunit B; AltName:
Full=U2 auxiliary factor 65 kDa subunit B; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit B; Short=U2 snRNP auxiliary factor large
subunit B
gi|332195625|gb|AEE33746.1| Splicing factor U2af large subunit B [Arabidopsis thaliana]
Length = 589
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
++CL +VT D+L+D++EY +I ED+++E K+G + ++ IPRP + D PG GK L
Sbjct: 489 IVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFL 547
>gi|12323333|gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
thaliana]
Length = 568
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
++CL +VT D+L+D++EY +I ED+++E K+G + ++ IPRP + D PG GK L
Sbjct: 468 IVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFL 526
>gi|22655131|gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
Length = 589
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
++CL +VT D+L+D++EY +I ED+++E K+G + ++ IPRP + D PG GK L
Sbjct: 489 IVCLTQVVTADDLRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFL 547
>gi|224125466|ref|XP_002329812.1| predicted protein [Populus trichocarpa]
gi|222870874|gb|EEF08005.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
VLCL + + L D++EYE+I ED++EEC K+G + ++ IPRP + + + G GK L
Sbjct: 196 VLCLTEAIAMEVLADDEEYEEILEDMREECCKFGTLINVVIPRPSQTEEQISGAGKVFL 254
>gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
Length = 331
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+CL +V+PDEL+D++EYEDI +D++EE +YG + + PRP
Sbjct: 269 VVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYGNLVKVLNPRP 312
>gi|326924922|ref|XP_003208671.1| PREDICTED: serine/threonine-protein kinase Kist-like [Meleagris
gallopavo]
Length = 550
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN+++ L+ E+EYEDI EDI+EEC KYG V SL IP+ EN PG G+
Sbjct: 453 VLRLLNVLSDASLQSEEEYEDILEDIREECQKYGPVVSLLIPK--EN---PGKGQ 502
>gi|255931767|ref|XP_002557440.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582059|emb|CAP80223.1| Pc12g05960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 554
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLNMVT DEL ++++YE+I ED+ EEC+K+G + ++IPR
Sbjct: 462 VLQLLNMVTLDELLNDEDYEEILEDVGEECSKFGKMIGIKIPR 504
>gi|383125816|gb|AFG43490.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125818|gb|AFG43491.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125820|gb|AFG43492.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125822|gb|AFG43493.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125824|gb|AFG43494.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125826|gb|AFG43495.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125828|gb|AFG43496.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125830|gb|AFG43497.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125832|gb|AFG43498.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125834|gb|AFG43499.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125836|gb|AFG43500.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
Length = 93
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 22 MVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV-DVPGCGK 70
V PDEL D+ E+EDI +D+KEEC K+G + L IPRP +VPG GK
Sbjct: 1 AVNPDELLDDQEFEDIYDDMKEECGKHGEITKLVIPRPKSTGEEVPGVGK 50
>gi|300637966|gb|ADK26147.1| kinase-interacting stathmin [Oryctolagus cuniculus]
Length = 254
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLN++ D L++E+EYEDI ED+KEEC KYG V SL +P+
Sbjct: 165 VLRLLNVLDDDYLENEEEYEDIVEDVKEECQKYGPVVSLLVPK 207
>gi|18406905|ref|NP_564764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|12323801|gb|AAG51869.1|AC079675_4 U2 snRNP auxiliary factor, large subunit, putative; 15147-15692
[Arabidopsis thaliana]
gi|332195616|gb|AEE33737.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 111
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
++CL +VT D+L+D+ EY DI ED+ +E K+G + ++ IPRP + D PG GK L
Sbjct: 11 IVCLTQVVTADDLRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFL 69
>gi|449509171|ref|XP_002189260.2| PREDICTED: serine/threonine-protein kinase Kist [Taeniopygia
guttata]
Length = 593
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN+++ L+ E+EYEDI EDI+EEC KYG V SL IP+ EN PG G+
Sbjct: 496 VLRLLNVLSDASLQCEEEYEDILEDIREECQKYGPVVSLLIPK--EN---PGKGQ 545
>gi|71027151|ref|XP_763219.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350172|gb|EAN30936.1| hypothetical protein TP03_0201 [Theileria parva]
Length = 509
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL L N+V+ DEL+D++EY DI +D++ EC YG+V +E+PR
Sbjct: 361 VLLLSNLVSKDELEDDEEYVDIIDDVRCECELYGVVLRVELPR 403
>gi|440900150|gb|ELR51345.1| Splicing factor U2AF 65 kDa subunit, partial [Bos grunniens mutus]
Length = 411
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 39/43 (90%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VLCL+NMV P+EL D++EYE+I ED+++EC KYG+V+S+EIPR
Sbjct: 312 VLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPR 354
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 16 VLCLLNM-VTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGK 70
V+ NM +T +EL D++E+E+I ED+ EEC KYG + S+ IPRP ++ + V G GK
Sbjct: 289 VVSFTNMGITEEELADDEEFENIMEDMNEECGKYGKIISVVIPRPSKSGESVTGIGK 345
>gi|384252245|gb|EIE25721.1| hypothetical protein COCSUDRAFT_64802 [Coccomyxa subellipsoidea
C-169]
Length = 581
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
L + MVTPD L D++EY ++ +D++EEC+KYG V + +PRP
Sbjct: 480 LQVTGMVTPDVLVDDEEYSEVIQDLQEECSKYGQVLRVLVPRP 522
>gi|357160098|ref|XP_003578657.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
distachyon]
Length = 534
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN-VDVPGCGKATL 73
V+CL +V+ D+L++++EY+DI ED+ E KYG + IPRP N V V G GK L
Sbjct: 434 VVCLTQVVSEDDLRNDEEYKDILEDMTFEGRKYGNLVQAVIPRPHPNGVPVAGVGKVFL 492
>gi|301117646|ref|XP_002906551.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
gi|262107900|gb|EEY65952.1| splicing factor U2af large subunit, putative [Phytophthora
infestans T30-4]
Length = 569
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV 63
V+ LLNMVTP+EL+DE+EY DI +DIK EC ++G V SL +PRP + V
Sbjct: 472 VIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGV 519
>gi|327284085|ref|XP_003226769.1| PREDICTED: serine/threonine-protein kinase Kist-like [Anolis
carolinensis]
Length = 217
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ + E+E+EDI +DIKEEC+KYG + SL +P+ EN PG G
Sbjct: 120 VLRLLNILNDASFQSEEEFEDIVDDIKEECSKYGQIVSLFVPK--EN---PGKGH 169
>gi|348688506|gb|EGZ28320.1| hypothetical protein PHYSODRAFT_309221 [Phytophthora sojae]
Length = 694
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV 63
V+ LLNMVTP+EL+DE+EY DI +DIK EC ++G V SL +PRP + +
Sbjct: 597 VIVLLNMVTPEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGI 644
>gi|432103844|gb|ELK30681.1| Serine/threonine-protein kinase Kist [Myotis davidii]
Length = 435
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL LLN++ D L+ E+ YED ED++EEC KYG V SL +P+ + PG G+
Sbjct: 338 VLRLLNVLDGDYLESEEGYEDAVEDVREECQKYGPVVSLLVPK-----ESPGRGQ 387
>gi|432090458|gb|ELK23883.1| Splicing factor U2AF 65 kDa subunit [Myotis davidii]
Length = 423
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 25/26 (96%)
Query: 45 CNKYGIVRSLEIPRPIENVDVPGCGK 70
C+KYG+V+S+EIPRP++ V+VPGCGK
Sbjct: 362 CSKYGLVKSIEIPRPVDGVEVPGCGK 387
>gi|353240191|emb|CCA72072.1| related to pre-mRNA splicing factor U2AF large chain
[Piriformospora indica DSM 11827]
Length = 403
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
V+ +LNMV ++L D+ EYE+I +DI+ EC+ +G V + +PRP++
Sbjct: 281 VVLMLNMVVAEDLMDDVEYEEILDDIRSECSGFGQVLGVYVPRPLK 326
>gi|145344032|ref|XP_001416543.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576769|gb|ABO94836.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 291
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 15 SVLCLLNM-VTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+V+ NM +T +EL D++EYE+I ED++EEC K+G + S+ IPRP
Sbjct: 246 TVVSFDNMGLTEEELADDEEYENIMEDMQEECGKHGEIVSVVIPRP 291
>gi|145502691|ref|XP_001437323.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404473|emb|CAK69926.1| unnamed protein product [Paramecium tetraurelia]
Length = 438
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
++L + N++T +++ ++E+ DI EDI+EEC+K+G V+++ IPRP + G GK
Sbjct: 303 NILVIKNVLTLEDVTIDEEFNDIMEDIREECSKFGTVKNVIIPRPEFGKIIVGVGK 358
>gi|159487587|ref|XP_001701804.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158281023|gb|EDP06779.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 309
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--IENVDVPGCG 69
+V+ L MV+ D+L D+ EY D+ +DI EE KYG + +EIPRP D PG G
Sbjct: 208 TVVRLSKMVSRDDLLDDGEYADLLDDITEEVGKYGKLVGVEIPRPGAAGAADPPGVG 264
>gi|340506971|gb|EGR33003.1| u2 small nuclear ribonucleoprotein auxiliary factor 2, putative
[Ichthyophthirius multifiliis]
Length = 302
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL L NM+ EL ++EY+ I ED+K+EC+K+G V S+ IPRP +VD GK
Sbjct: 194 VLVLKNMINDGELIIDEEYKQIEEDVKDECSKHGKVVSIAIPRP--SVDDVKAGK 246
>gi|323456301|gb|EGB12168.1| hypothetical protein AURANDRAFT_8852, partial [Aureococcus
anophagefferens]
Length = 98
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
VL L +MVT +L D++ Y D+ +D+ +EC YG V ++EIPRP P G+ ++
Sbjct: 4 VLQLRHMVTDADLIDDEAYADVVDDVLQECGSYGDVENVEIPRPEPGTTRPAPGQGSV 61
>gi|145523992|ref|XP_001447829.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415351|emb|CAK80432.1| unnamed protein product [Paramecium tetraurelia]
Length = 419
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 40/56 (71%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
++L + N++T +++ ++E+ DI +DIKEEC+K+G V+++ IPRP + G GK
Sbjct: 284 NILVIKNVLTLEDVTIDEEFNDIMDDIKEECSKFGTVKNIIIPRPEFGKIIIGVGK 339
>gi|255568277|ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large subunit, putative [Ricinus communis]
Length = 549
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 8 LVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYG 49
++ P+ V+CL +VT DELKD+DEYEDI ED++ E K+
Sbjct: 480 MLQPVPTKVVCLTQVVTADELKDDDEYEDILEDMRTEGGKFA 521
>gi|414591746|tpg|DAA42317.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYG 49
V+CL +VT DEL+D++EY+DI ED++EE +KYG
Sbjct: 491 VVCLTQVVTEDELRDDEEYDDIVEDMREEGHKYG 524
>gi|440290938|gb|ELP84237.1| splicing factor u2af large subunit, putative [Entamoeba invadens
IP1]
Length = 623
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGKA 71
V+ L NM P++L +E Y ++ +DI+E C YG V S+ IPRP E P G G+A
Sbjct: 370 VIVLFNMFFPEDLNNEQRYIELVDDIREACIAYGEVISISIPRPTETNKRPSGIGRA 426
>gi|299473654|emb|CBN78048.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 259
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIP 57
P +V+ + N+VTP+EL D++ +++ ED+ EEC+KYG V +EIP
Sbjct: 156 PAPTSTVVRIGNVVTPEELTDDEAQKEVVEDMTEECSKYGAVAGIEIP 203
>gi|399216439|emb|CCF73127.1| unnamed protein product [Babesia microti strain RI]
Length = 424
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-IENVDVPGCGKATL 73
+V+ LLN+V ++L D+D Y+ + EDI++E KYG + + IPRP ++ G GK L
Sbjct: 321 TVVQLLNIVFHEDLIDDDSYQSLLEDIRKEAKKYGTLEDIVIPRPNLDKTFNEGVGKVFL 380
>gi|85000357|ref|XP_954897.1| snrnp splicing factor (U2AF) [Theileria annulata strain Ankara]
gi|65303043|emb|CAI75421.1| snrnp splicing factor (U2AF), putative [Theileria annulata]
Length = 486
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
L L N+V+ +EL D++EY DI +DI+ EC YG+V +E+PR
Sbjct: 339 LLLSNLVSKEELDDDEEYVDIIDDIRCECELYGVVLRVELPR 380
>gi|150864148|ref|XP_001382862.2| hypothetical protein PICST_42021 [Scheffersomyces stipitis CBS
6054]
gi|149385404|gb|ABN64833.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 533
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-------IENVDVPGC 68
V+ LLN+VTP +L ++ Y+ I +DIK E ++ G V S++IPRP + VPG
Sbjct: 429 VIQLLNVVTPKDLVEDSNYQFILKDIKREASRIGTVVSIKIPRPANEFTPGLAQFSVPGL 488
Query: 69 GK 70
GK
Sbjct: 489 GK 490
>gi|403223258|dbj|BAM41389.1| snRNP splicing factor U2AF [Theileria orientalis strain Shintoku]
Length = 534
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
L L N+V+ +EL D+ EY DI +D+K EC YG+V LE+PR
Sbjct: 363 ALLLGNLVSKEELDDDAEYVDIIDDVKTECEDYGVVLRLELPR 405
>gi|237839189|ref|XP_002368892.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
gi|211966556|gb|EEB01752.1| U2 snRNP auxiliary factor or splicing factor, putative [Toxoplasma
gondii ME49]
Length = 553
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATL 73
V+ LLN V ++L D EYE IC+DIK+E K+G + + +P+P E++ G GK L
Sbjct: 451 VVQLLNCVYQEDLIDPKEYEAICDDIKQEAEKHGALEEVLVPKPNEDLSYREGVGKVFL 509
>gi|118376546|ref|XP_001021455.1| hypothetical protein TTHERM_00318730 [Tetrahymena thermophila]
gi|89303222|gb|EAS01210.1| hypothetical protein TTHERM_00318730 [Tetrahymena thermophila
SB210]
Length = 459
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE-NVDVPGCGK 70
+L L NM+ EL ++E+ I ED+KEEC+K+G V + IPRP + N V G G+
Sbjct: 375 ILVLHNMIADGELIIDEEFRQIEEDVKEECSKHGKVVKITIPRPSDSNEQVKGQGR 430
>gi|221483471|gb|EEE21790.1| U2 snRNP auxiliary factor, putative [Toxoplasma gondii GT1]
gi|221507941|gb|EEE33528.1| U2 snRNP splicing factor, putative [Toxoplasma gondii VEG]
Length = 553
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATL 73
V+ LLN V ++L D EYE IC+DIK+E K+G + + +P+P E++ G GK L
Sbjct: 451 VVQLLNCVYQEDLIDPKEYEAICDDIKQEAEKHGALEEVLVPKPNEDLSYREGVGKVFL 509
>gi|167395950|ref|XP_001741817.1| hexokinase [Entamoeba dispar SAW760]
gi|165893477|gb|EDR21726.1| hexokinase, putative [Entamoeba dispar SAW760]
Length = 974
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGK 70
++ + NMV P++L D+ Y ++ +DI+ C +YG V S+ IPRP E P G G+
Sbjct: 606 IIVIFNMVYPEDLIDQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGR 661
>gi|219116422|ref|XP_002179006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409773|gb|EEC49704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 325
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VP + VL L NMVT ++L + EY+ + +++K+EC K+G + LEIPR
Sbjct: 225 VPNIPTRVLVLHNMVTDEDLATDTEYQGLFDEVKDECAKFGRLERLEIPR 274
>gi|448118323|ref|XP_004203467.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|448120732|ref|XP_004204050.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384335|emb|CCE79039.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
gi|359384918|emb|CCE78453.1| Piso0_001076 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 34/45 (75%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+V+ L+N V+P E++D+ E+E I DI E +KYG V+S+++P+P
Sbjct: 475 NVIQLINAVSPREIRDKAEFEFIINDIVNEVSKYGRVKSVKVPQP 519
>gi|429854658|gb|ELA29655.1| splicing factor u2af large subunit [Colletotrichum gloeosporioides
Nara gc5]
Length = 559
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/45 (62%), Positives = 37/45 (82%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL LLNMVTP+EL D D+YE+I ED++EEC K+G V ++IPRP+
Sbjct: 461 VLQLLNMVTPEELMDNDDYEEIKEDVEEECTKFGKVLDVKIPRPV 505
>gi|149248350|ref|XP_001528562.1| hypothetical protein LELG_01082 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448516|gb|EDK42904.1| hypothetical protein LELG_01082 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 634
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 6 DRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP------ 59
D + P + +V+ +LN ++ EL D+ E +DI+ E +K+G V+S++IPRP
Sbjct: 520 DTVQPQRKSNVIQILNALSTKELVDDALVEFATKDIRNEASKHGTVKSIKIPRPTNDLVP 579
Query: 60 -IENVDVPGCGK 70
++ VPG GK
Sbjct: 580 GLQQFKVPGVGK 591
>gi|145536694|ref|XP_001454069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421813|emb|CAK86672.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 4 PWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P L+P V+ LNM + ++L ++D YE++ EDI+ EC ++G + +EIPRP
Sbjct: 314 PQSALIPS---KVVQFLNMCSIEDLYEDDIYEELMEDIRSECIRFGQIEKIEIPRP 366
>gi|384247050|gb|EIE20538.1| hypothetical protein COCSUDRAFT_54348 [Coccomyxa subellipsoidea
C-169]
Length = 213
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEEC-NKYGIVRSLEIPRPIE 61
VL L NMVT +EL D +EY DI +DI E +KYG + SL IP+P +
Sbjct: 112 VLRLANMVTREELLDPEEYSDIVDDITSELESKYGTLSSLVIPQPSQ 158
>gi|108864608|gb|ABG22562.1| U2 snRNP auxilliary factor, large subunit, splicing factor family
protein, expressed [Oryza sativa Japonica Group]
Length = 550
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 28/33 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKY 48
V+CL +V+PDEL+D++EYEDI +D++EE +Y
Sbjct: 474 VVCLTQVVSPDELRDDEEYEDIVQDMREEGCRY 506
>gi|302834772|ref|XP_002948948.1| hypothetical protein VOLCADRAFT_89331 [Volvox carteri f.
nagariensis]
gi|300265693|gb|EFJ49883.1| hypothetical protein VOLCADRAFT_89331 [Volvox carteri f.
nagariensis]
Length = 729
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKY--GIVRSLEIPRPIENV 63
C+L M+ D L D++EYE + +D+K+EC+++ G V ++++PRP E V
Sbjct: 546 FCVLGMLNADMLLDDEEYEAVIDDLKDECDRHAPGNVVAVKVPRPPEEV 594
>gi|414591745|tpg|DAA42316.1| TPA: hypothetical protein ZEAMMB73_924732 [Zea mays]
Length = 538
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKY 48
V+CL +VT DEL+D++EY+DI ED++EE +KY
Sbjct: 484 VVCLTQVVTEDELRDDEEYDDIVEDMREEGHKY 516
>gi|412990165|emb|CCO19483.1| predicted protein [Bathycoccus prasinos]
Length = 495
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 17 LCLLNM-VTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
L L NM + +EL D +EYE I ED +EEC K+G V ++IP+P
Sbjct: 402 LVLKNMGIKDEELNDPEEYEIIVEDTQEECEKFGKVLGMKIPKP 445
>gi|224030681|gb|ACN34416.1| unknown [Zea mays]
Length = 425
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 28/33 (84%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKY 48
V+CL +VT DEL+D++EY+DI ED++EE +KY
Sbjct: 371 VVCLTQVVTEDELRDDEEYDDIVEDMREEGHKY 403
>gi|159473054|ref|XP_001694654.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158276466|gb|EDP02238.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 306
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPG 67
++ L + V+ +E+ D+ EY+DI ED+K+E +++G+ ++ IPRP + P
Sbjct: 253 IVVLTDAVSAEEIIDDQEYQDILEDMKDEASRHGLCNNVLIPRPTADNPTPA 304
>gi|344303161|gb|EGW33435.1| hypothetical protein SPAPADRAFT_60791 [Spathaspora passalidarum
NRRL Y-27907]
Length = 273
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLN VT EL D+ Y+ I +DIK+E +K+G V S++IPRP
Sbjct: 171 VIQLLNCVTLQELNDDTSYKFIQQDIKQEASKFGNVVSIKIPRP 214
>gi|407043289|gb|EKE41863.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
nuttalli P19]
Length = 628
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGK 70
++ + NMV P++L D+ Y ++ +DI+ C +YG V S+ IPRP E P G G+
Sbjct: 388 IIIIFNMVYPEDLTDQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGR 443
>gi|303272315|ref|XP_003055519.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463493|gb|EEH60771.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 394
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR--PIENVDV 65
+++CL N+VT +L DE+ Y ++ D++ EC K G V+ + IPR P+ +V V
Sbjct: 304 TIVCLSNIVTESDLADEEAYAELLADVRTECAKCGEVKDIRIPRGGPVGSVFV 356
>gi|413920348|gb|AFW60280.1| hypothetical protein ZEAMMB73_339264 [Zea mays]
Length = 549
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKY 48
V+CL +VT DEL+D++EY DI ED++EE KY
Sbjct: 495 VVCLTQVVTADELRDDEEYNDIVEDMREEGRKY 527
>gi|384249807|gb|EIE23288.1| hypothetical protein COCSUDRAFT_23864, partial [Coccomyxa
subellipsoidea C-169]
Length = 464
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
P +L L V+ DEL +++EY DI +D+++E +K+G V + IPRP P G
Sbjct: 361 PTATRILALQEAVSLDELANDEEYVDIVQDMRDEASKFGTVIDVLIPRPAPEGQPPPSG 419
>gi|67475980|ref|XP_653619.1| U2 snRNP auxiliary factor large subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56470591|gb|EAL48233.1| U2 snRNP auxiliary factor large subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 712
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGK 70
++ + NMV P++L D+ Y ++ +DI+ C +YG V S+ IPRP E P G G+
Sbjct: 388 IIIIFNMVYPEDLTDQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGR 443
>gi|209881648|ref|XP_002142262.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209557868|gb|EEA07913.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 396
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
P + S++ L+ +VTP ++D EY++I ED+KE C K+G + S I +P E
Sbjct: 277 PNINSSIMRLIQVVTPSNIEDIYEYDEIFEDVKEGCEKFGKILSGRILKPGE 328
>gi|397623851|gb|EJK67169.1| hypothetical protein THAOC_11833 [Thalassiosira oceanica]
Length = 436
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 9 VPPLRFS-----VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VPPL V+ L +M+T +L D++EY DI ED ++EC+ +G ++++ IPR
Sbjct: 330 VPPLASKASPSPVVELRHMLTQQDLDDDNEYNDILEDTRDECSSFGTLKNIVIPR 384
>gi|449707077|gb|EMD46798.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 712
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGK 70
++ + NMV P++L D+ Y ++ +DI+ C +YG V S+ IPRP E P G G+
Sbjct: 388 IIIIFNMVYPEDLTDQQRYIELIDDIRFVCQEYGEVESISIPRPTEENKKPSGLGR 443
>gi|145544238|ref|XP_001457804.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425622|emb|CAK90407.1| unnamed protein product [Paramecium tetraurelia]
Length = 435
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 4 PWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P L+P V+ LNM + ++L ++D YE++ EDI+ EC ++G + +EIPRP
Sbjct: 323 PQSALIPS---KVVQFLNMCSVEDLYEDDLYEELMEDIRSECIRFGQIEKIEIPRP 375
>gi|307106531|gb|EFN54776.1| hypothetical protein CHLNCDRAFT_58050 [Chlorella variabilis]
Length = 354
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
V+ L + VT +EL D+ EY DI ED+KEEC KYG V + I
Sbjct: 254 VVKLSHAVTLEELGDDQEYGDIMEDMKEECGKYGTVVQVHI 294
>gi|428671645|gb|EKX72563.1| conserved hypothetical protein [Babesia equi]
Length = 455
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL L N+V+ +EL D+ EY DI +D++ EC YG V LE+PR
Sbjct: 311 VLWLSNLVSKEELDDDAEYFDIIDDVRTECEDYGQVIRLELPR 353
>gi|330803435|ref|XP_003289712.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
gi|325080222|gb|EGC33787.1| hypothetical protein DICPUDRAFT_56283 [Dictyostelium purpureum]
Length = 501
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
V+ LLN+V ++L D+ EY++I D+KEEC +G +SL +P P +N
Sbjct: 381 VIQLLNLVDKEDLYDDKEYDNILIDVKEECENFGPTQSLWLPMPSKN 427
>gi|413920214|gb|AFW60146.1| hypothetical protein ZEAMMB73_955987 [Zea mays]
Length = 536
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 17/77 (22%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------- 59
V L V+CL +VT DELKD++EYEDI ED++ E G + + IPRP
Sbjct: 432 VGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEA---GNLVKVIIPRPDPSGQPVVG 488
Query: 60 -----IENVDVPGCGKA 71
+E D+ G KA
Sbjct: 489 VGKVFLEYADIDGAAKA 505
>gi|145542929|ref|XP_001457151.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424966|emb|CAK89754.1| unnamed protein product [Paramecium tetraurelia]
Length = 429
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 4 PWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P L+P V+ LNM + +L ++D +E++ EDI+ EC +YG + +EIPRP
Sbjct: 317 PQSALIPS---KVVQFLNMCSIQDLYEDDIFEELMEDIRSECMRYGQIEKIEIPRP 369
>gi|237829727|ref|XP_002364161.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Toxoplasma gondii ME49]
gi|211961825|gb|EEA97020.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Toxoplasma gondii ME49]
gi|221481075|gb|EEE19483.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF, putative
[Toxoplasma gondii GT1]
gi|221507020|gb|EEE32624.1| U2 small nuclear ribonucleoprotein auxiliary factor U2AF, putative
[Toxoplasma gondii VEG]
Length = 704
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 8 LVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKY-GIVRSLEIPRPIENVD 64
L P + VL L N+V ++L D+ EYEDI EDI+ EC + G V S+ IPRP+ +
Sbjct: 418 LRPQVCTRVLLLSNIVEVEDLLDDKEYEDIVEDIRLECEECGGPVLSVNIPRPVRGFE 475
>gi|302846543|ref|XP_002954808.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
gi|300259991|gb|EFJ44214.1| splicing factor U2AF, large subunit [Volvox carteri f. nagariensis]
Length = 532
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 22 MVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI-ENVDVPGCGKATL 73
+V+ +E+ D EYEDI D+K+E +++G+ ++ IPRP EN + PG K +
Sbjct: 438 LVSAEEIVDNTEYEDILADMKDEASRHGLCNNVLIPRPTAENPNPPGMCKVIM 490
>gi|30690730|ref|NP_849509.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|19310597|gb|AAL85029.1| putative splicing factor [Arabidopsis thaliana]
gi|332661289|gb|AEE86689.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 542
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYG 49
+V+CL +VT DEL+D++EY DI ED+++E K+G
Sbjct: 472 TVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFG 506
>gi|145538137|ref|XP_001454774.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422551|emb|CAK87377.1| unnamed protein product [Paramecium tetraurelia]
Length = 426
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 4 PWDRLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P L+P V+ LNM + +L ++D +E++ EDI+ EC +YG + +EIPRP
Sbjct: 314 PQSALIPS---KVVQFLNMCSIQDLYEDDIFEELMEDIRSECVRYGQIEKIEIPRP 366
>gi|124511860|ref|XP_001349063.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23498831|emb|CAD50908.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 1125
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ L + T +EL D EY+DI EDIK EC+KYG ++LE+ P+
Sbjct: 893 VIVLNKIATFEELSDSSEYKDIVEDIKIECDKYG--KTLEVVLPV 935
>gi|260942693|ref|XP_002615645.1| hypothetical protein CLUG_04527 [Clavispora lusitaniae ATCC 42720]
gi|238850935|gb|EEQ40399.1| hypothetical protein CLUG_04527 [Clavispora lusitaniae ATCC 42720]
Length = 559
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-------IENVDVPGC 68
V+ L+N+VT ++L +++ Y+ I DI EE +G V SL+IP+P +E V+ PG
Sbjct: 455 VIQLINIVTIEDLCNDETYKFIYSDIFEEAKTFGTVLSLKIPKPSYKKSPGVEEVNEPGV 514
Query: 69 GK 70
GK
Sbjct: 515 GK 516
>gi|209879137|ref|XP_002141009.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556615|gb|EEA06660.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 442
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI--ENVDVPGCGK 70
V+ LLN++ P+EL D+ EY I + +K E K+G + + PRP EN+ G GK
Sbjct: 335 VVQLLNIIQPEELLDDQEYHSILDSVKTEAEKFGTILEIFSPRPKSRENLYCNGAGK 391
>gi|66808005|ref|XP_637725.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466159|gb|EAL64222.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 671
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 35/47 (74%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
V+ +LN+V +++ D+ EY++I D+KEEC ++G V+S+ +P P +N
Sbjct: 570 VIQILNLVDREDIFDDKEYDNILIDVKEECEQFGEVQSIWLPLPSKN 616
>gi|70946422|ref|XP_742927.1| U2 snRNP auxiliary factor [Plasmodium chabaudi chabaudi]
gi|56522174|emb|CAH84932.1| U2 snRNP auxiliary factor, putative [Plasmodium chabaudi chabaudi]
Length = 561
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP---GCGKAT 72
V+ L N V ++L +YE+I +D+KEE KYG ++S+ IP+P N+D+ G GK
Sbjct: 460 VIQLTNAVFQEDLIINSQYEEILKDVKEEAEKYGTLQSIVIPKP--NIDLSYTEGVGKIF 517
Query: 73 L 73
L
Sbjct: 518 L 518
>gi|384253302|gb|EIE26777.1| hypothetical protein COCSUDRAFT_64653 [Coccomyxa subellipsoidea
C-169]
Length = 472
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 16 VLCLLNMVTPDELKDEDEYED--ICEDIKEECNKYGIVRSLEIPRP 59
V+ L NM+ +L DE E D + ED+KEEC KYG V + +PRP
Sbjct: 216 VVLLKNMLKALQLLDEAERTDASLMEDVKEECGKYGTVEGIAVPRP 261
>gi|213408691|ref|XP_002175116.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
gi|212003163|gb|EEB08823.1| splicing factor U2AF subunit [Schizosaccharomyces japonicus yFS275]
Length = 511
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD----VPGCG 69
VL + N++ DE D ++YEDI + ++ +CN+YG V L++PR + D PG G
Sbjct: 410 VLQIHNLLDADETLDTEDYEDIRKSVQNKCNEYGQVLDLKLPRETSSSDNTSAPPGVG 467
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGC 68
V+ LLNMV+ ++L ++D +D+ +D+ EC K G V +EIP+P + + P C
Sbjct: 376 VIQLLNMVSIEDLFEDDIVDDLYQDVMTECEKIGPVEKIEIPKPCKTTGICPPC 429
>gi|156086444|ref|XP_001610631.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797884|gb|EDO07063.1| conserved hypothetical protein [Babesia bovis]
Length = 400
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 8/67 (11%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR--------PIENVDVPG 67
VL L N+V+ ++L+D+ EY DI +D++ EC +YG V +E+PR I N+D
Sbjct: 257 VLLLANLVSKEDLEDDAEYYDIIDDVRCECEEYGPVVRVEMPRVPKGLTLDEIRNMDFSA 316
Query: 68 CGKATLV 74
G A ++
Sbjct: 317 VGCAFVL 323
>gi|312078073|ref|XP_003141580.1| U2af splicing factor protein 1 [Loa loa]
Length = 460
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 20/29 (68%), Positives = 23/29 (79%), Gaps = 2/29 (6%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDIC 38
PP VLCL+NMVT DELKD++EYE IC
Sbjct: 401 PPTE--VLCLMNMVTEDELKDDEEYEGIC 427
>gi|42573197|ref|NP_974695.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
gi|332661288|gb|AEE86688.1| Splicing factor U2af large subunit A [Arabidopsis thaliana]
Length = 565
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYG 49
+V+CL +VT DEL+D++EY DI ED+++E K+
Sbjct: 472 TVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGKFA 506
>gi|242069431|ref|XP_002449992.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
gi|241935835|gb|EES08980.1| hypothetical protein SORBIDRAFT_05g026786 [Sorghum bicolor]
Length = 296
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGI 50
V+CL+++V+ DEL+DE YEDI +D++EE +YGI
Sbjct: 253 VVCLVHVVSADELEDE-VYEDIMDDMREEARRYGI 286
>gi|401410983|ref|XP_003884939.1| putative U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Neospora caninum Liverpool]
gi|325119358|emb|CBZ54911.1| putative U2 small nuclear ribonucleoprotein auxiliary factor U2AF
[Neospora caninum Liverpool]
Length = 588
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 8 LVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKY-GIVRSLEIPRPIENVD 64
L P + VL L N+V ++L D+ EYE+I EDI+ EC + G V S+ IPRP+ +
Sbjct: 426 LRPQVCTRVLLLSNIVDVEDLLDDKEYEEIVEDIRLECEECGGPVLSVNIPRPVRGFE 483
>gi|19112188|ref|NP_595396.1| U2AF large subunit (U2AF-59) [Schizosaccharomyces pombe 972h-]
gi|549144|sp|P36629.1|U2AF2_SCHPO RecName: Full=Splicing factor U2AF 59 kDa subunit; AltName: Full=U2
auxiliary factor 59 kDa subunit; Short=U2AF59; AltName:
Full=U2 snRNP auxiliary factor large subunit
gi|410322|gb|AAA03578.1| splicing factor U2AF large subunit [Schizosaccharomyces pombe]
gi|5441489|emb|CAB46760.1| U2AF large subunit (U2AF-59) [Schizosaccharomyces pombe]
Length = 517
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL L N++T DE+ D EYEDI E +K + + YG + ++IPR I
Sbjct: 419 VLQLHNLITGDEIMDVQEYEDIYESVKTQFSNYGPLIDIKIPRSI 463
>gi|224003373|ref|XP_002291358.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973134|gb|EED91465.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 99
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGKATL 73
V+ L +M+T +L+D++EY +I ED ++EC+ +G ++++ IPR + PG K L
Sbjct: 5 VVELKHMLTQQDLEDDNEYNEILEDTRDECSSFGTLKNIIIPR-----NGPGATKIFL 57
>gi|209878476|ref|XP_002140679.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556285|gb|EEA06330.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 577
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 21 NMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
N++TP+EL ++ Y +I ++IK+E KYG ++ + IPRP
Sbjct: 444 NIITPEELVVDNIYNEIMDEIKQEVCKYGNIKHIVIPRP 482
>gi|357017085|gb|AET50571.1| hypothetical protein [Eimeria tenella]
Length = 527
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATLV 74
V+ LLN + P+++ + +E +D + E KYG + + IPRP E++ PG GK LV
Sbjct: 425 VVQLLNTIYPEDIMTDSSHEAAVKDTRSEAEKYGPLEEVLIPRPNEDLSYKPGVGKVFLV 484
>gi|294659352|ref|XP_461720.2| DEHA2G04004p [Debaryomyces hansenii CBS767]
gi|199433897|emb|CAG90172.2| DEHA2G04004p [Debaryomyces hansenii CBS767]
Length = 636
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-------IENVDVPGC 68
V+ L+N+VT +L D+ ++ I +DI++E +K+G +++++IPRP I PG
Sbjct: 532 VIQLINIVTAKDLMDDASFKFIQKDIQQEVSKFGNLKTIKIPRPANDYTPGISQFTQPGL 591
Query: 69 GK 70
GK
Sbjct: 592 GK 593
>gi|255724230|ref|XP_002547044.1| predicted protein [Candida tropicalis MYA-3404]
gi|240134935|gb|EER34489.1| predicted protein [Candida tropicalis MYA-3404]
Length = 700
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
V+ LLN VT EL D + Y+ DI E +KYG+V + IPRPI
Sbjct: 595 VIRLLNAVTERELSDVETYKFTKNDIYREASKYGVVEQVVIPRPI 639
>gi|389585165|dbj|GAB67896.1| U2 snRNP auxiliary factor [Plasmodium cynomolgi strain B]
Length = 894
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
V+ L N V ++L + +YE+I +DIKEE KYG ++++ IP+P +++ G GK L
Sbjct: 793 VVQLTNAVFQEDLLIDSQYEEILKDIKEEAEKYGPLQNIVIPKPNKDLSYTEGVGKIFL 851
>gi|403367221|gb|EJY83425.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 543
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
V+ +NM++ ++L +EDE + +D+ +EC YG + S+EIP+P E
Sbjct: 442 VVQFINMISVEDLFEEDEIIHVKDDLLQECKNYGEIISIEIPKPDE 487
>gi|330931856|ref|XP_003303563.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
gi|311320368|gb|EFQ88342.1| hypothetical protein PTT_15819 [Pyrenophora teres f. teres 0-1]
Length = 578
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+CL+NMVT DEL ++DEYE+I EDI+EEC KYG + +IPRP
Sbjct: 481 VVCLMNMVTSDELLNDDEYEEIKEDIEEECGKYGPIVETKIPRP 524
>gi|219112083|ref|XP_002177793.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410678|gb|EEC50607.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 109
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
+P + V+ L NM++ ++L DE Y+++ ED +EEC+++G + S+ IP+ E
Sbjct: 8 LPQVVSRVVELQNMLSDEDLVDEQAYQEVLEDTREECSQFGKLISVVIPKKGET 61
>gi|340506650|gb|EGR32741.1| u2 snrnp auxilliary splicing factor, putative [Ichthyophthirius
multifiliis]
Length = 276
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV--PGCGK 70
V+ LLNM +P++L ++D Y +I +D++ EC K G + +EI RP + + P GK
Sbjct: 172 VIQLLNMCSPEDLFEDDIYNEIYQDVQSECEKIGPIEKVEIVRPCKMTGICPPSVGK 228
>gi|156099808|ref|XP_001615700.1| U2 snRNP auxiliary factor [Plasmodium vivax Sal-1]
gi|148804574|gb|EDL45973.1| U2 snRNP auxiliary factor, putative [Plasmodium vivax]
Length = 914
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
V+ L N V ++L + +YE+I DIKEE KYG ++++ IP+P +++ G GK L
Sbjct: 813 VVQLTNAVFQEDLLIDSQYEEILRDIKEEAEKYGPLQNIVIPKPSKDLSYTEGVGKIFL 871
>gi|221059061|ref|XP_002260176.1| U2 snRNP auxiliary factor [Plasmodium knowlesi strain H]
gi|193810249|emb|CAQ41443.1| U2 snRNP auxiliary factor, putative [Plasmodium knowlesi strain H]
Length = 865
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
V+ L N V ++L + +YE+I DIKEE KYG ++++ IP+P +++ G GK L
Sbjct: 764 VVQLTNAVFQEDLIIDSQYEEILRDIKEEAEKYGPLQNIVIPKPNKDLSYTEGVGKIFL 822
>gi|401402174|ref|XP_003881185.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115597|emb|CBZ51152.1| unnamed protein product [Neospora caninum Liverpool]
Length = 504
Score = 42.0 bits (97), Expect = 0.047, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 30 DEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATL 73
D EYE IC+DIK+E K+G + + +P+P E++ G GK L
Sbjct: 418 DPKEYEAICDDIKQEAEKHGALEEVLVPKPNEDLSYREGVGKVRL 462
>gi|281207514|gb|EFA81697.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 682
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLNM +E++D++ YE++ D K+ C ++G + S+ I RP
Sbjct: 546 VVQLLNMTDKEEIQDDNNYENLLLDTKDACEEFGEIESIFISRP 589
>gi|50552688|ref|XP_503754.1| YALI0E09889p [Yarrowia lipolytica]
gi|49649623|emb|CAG79345.1| YALI0E09889p [Yarrowia lipolytica CLIB122]
Length = 601
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVR--SLEIPRP 59
SV+ L N+VT DEL D+ Y +I E ++ EC KYG ++IPRP
Sbjct: 490 SVIVLFNLVTLDELLDDVAYREITEQVESECLKYGGGEEVQIKIPRP 536
>gi|222423510|dbj|BAH19725.1| AT4G36690 [Arabidopsis thaliana]
Length = 565
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 27/35 (77%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYG 49
+V+CL +VT DEL+D++EY DI ED+++E ++
Sbjct: 472 TVVCLTQVVTEDELRDDEEYGDIMEDMRQEGGRFA 506
>gi|68076889|ref|XP_680364.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56501286|emb|CAI04220.1| conserved hypothetical protein [Plasmodium berghei]
Length = 652
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD 64
V+ L + T +EL + ++Y++I EDIK EC KYG V LE+ PI ++D
Sbjct: 456 VIVLSKIATFEELSNPEDYKEISEDIKIECEKYGPV--LEVVLPIISID 502
>gi|82794077|ref|XP_728296.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484570|gb|EAA19861.1| KED [Plasmodium yoelii yoelii]
Length = 858
Score = 41.6 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD 64
V+ L + T DEL + ++Y++I EDIK EC KYG V +E+ PI ++D
Sbjct: 659 VIVLSKIATFDELSNPEDYKEISEDIKIECEKYGSV--IEVVLPIVSLD 705
>gi|68481460|ref|XP_715369.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
gi|46436988|gb|EAK96342.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
gi|238882073|gb|EEQ45711.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 717
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPG 67
V+ LLN VT EL D+ Y I D+ E +KYG V ++ IPRP N PG
Sbjct: 613 VIRLLNAVTESELADDATYSFIRNDMYNEASKYGEVVNVRIPRPSRN-HTPG 663
>gi|68481591|ref|XP_715304.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
gi|46436920|gb|EAK96275.1| potential spliceosomal U2AF large subunit [Candida albicans SC5314]
Length = 719
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPG 67
V+ LLN VT EL D+ Y I D+ E +KYG V ++ IPRP N PG
Sbjct: 615 VIRLLNAVTESELADDATYSFIRNDMYNEASKYGEVVNVRIPRPSRN-HTPG 665
>gi|389582230|dbj|GAB64785.1| RNA binding domain [Plasmodium cynomolgi strain B]
Length = 1046
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIP 57
P R VL + T DEL D EY DI EDIK EC K+G V + +P
Sbjct: 891 PTRTVVLS--RIATFDELCDPSEYRDIVEDIKIECEKFGSVVEVVLP 935
>gi|303275530|ref|XP_003057059.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461411|gb|EEH58704.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 386
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 2 YPPWDRLVPPLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+PP VP + C+L MV+ EL E+ ED++EEC K GI+ ++ +P P
Sbjct: 153 FPPTPLGVPAQTLTRRCVLLDGMVSSGELSSPRSREEFKEDLREECAKCGIIDAMVVPPP 212
Query: 60 I-ENVDVPGCGKA 71
E +D G+A
Sbjct: 213 PREAIDAGDPGRA 225
>gi|85001331|ref|XP_955384.1| RNA splicing factor [Theileria annulata strain Ankara]
gi|65303530|emb|CAI75908.1| RNA splicing factor, putative [Theileria annulata]
Length = 643
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEY-EDICEDIKEECNKYGIVRSLEIPR 58
PL S L L NM T + D E+ ++I ED+KEEC KYG V + + R
Sbjct: 544 PLNSSNLVLSNMYTSADYADNHEFFDEIEEDVKEECGKYGTVVQVFVNR 592
>gi|71026268|ref|XP_762815.1| splicing factor [Theileria parva strain Muguga]
gi|68349767|gb|EAN30532.1| splicing factor, putative [Theileria parva]
Length = 644
Score = 40.8 bits (94), Expect = 0.094, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEY-EDICEDIKEECNKYGIV 51
PL S L L NM T + +D E+ ++I ED+KEEC KYG V
Sbjct: 545 PLNSSNLVLSNMYTSADYEDNREFFDEIEEDVKEECGKYGTV 586
>gi|344234537|gb|EGV66405.1| hypothetical protein CANTEDRAFT_91566 [Candida tenuis ATCC 10573]
Length = 641
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV-------DVPGC 68
V+ ++N VT +LKD++ Y I D+++E K+G V ++IPRP + PG
Sbjct: 534 VIQIINAVTTKDLKDDETYGFISSDVEQEVKKFGEVIRVKIPRPANDFTPGLTESSTPGL 593
Query: 69 GK 70
G+
Sbjct: 594 GR 595
>gi|68068227|ref|XP_676023.1| U2 snRNP auxiliary factor [Plasmodium berghei strain ANKA]
gi|56495523|emb|CAI00540.1| U2 snRNP auxiliary factor, putative [Plasmodium berghei]
Length = 630
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP---GCGKAT 72
V+ L N V ++L + +Y++I +D+KEE KYG ++S+ IP+P N D+ G GK
Sbjct: 529 VIQLTNAVFQEDLIIDSQYDEILKDVKEEAEKYGPLQSIVIPKP--NTDLSYTEGVGKIF 586
Query: 73 L 73
L
Sbjct: 587 L 587
>gi|403362995|gb|EJY81233.1| hypothetical protein OXYTRI_21372 [Oxytricha trifallax]
Length = 411
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 26 DELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+ +K + E+ ++ +DI+EEC KYG +R + IP+P
Sbjct: 305 ENMKTKQEFYEVEDDIREECEKYGKIRQVMIPKP 338
>gi|296083697|emb|CBI23686.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 16 VLCLLNMVTPDELKD--EDEYEDICEDIKEECNKYGIVRSLEI 56
VL L N+V PD+L E E E+I EDI+ EC ++G V+S+ I
Sbjct: 619 VLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNI 661
>gi|359477752|ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
Length = 895
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 16 VLCLLNMVTPDELKD--EDEYEDICEDIKEECNKYGIVRSLEI 56
VL L N+V PD+L E E E+I EDI+ EC ++G V+S+ I
Sbjct: 615 VLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNI 657
>gi|82540696|ref|XP_724646.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479360|gb|EAA16211.1| splicing factor-like protein, putative [Plasmodium yoelii yoelii]
Length = 714
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP---GCGKAT 72
V+ L N V ++L +Y++I +D+KEE KYG ++S+ IP+P N D+ G GK
Sbjct: 613 VIQLTNAVFQEDLIINSQYDEILKDVKEEAEKYGPLQSIVIPKP--NTDLSYTEGVGKIF 670
Query: 73 L 73
L
Sbjct: 671 L 671
>gi|307108867|gb|EFN57106.1| hypothetical protein CHLNCDRAFT_143928 [Chlorella variabilis]
Length = 453
Score = 40.4 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 22 MVTPDELKDEDEYEDICEDIKEECNKYGIV 51
M+T D L D+ EY D+ DI EEC+K+G V
Sbjct: 306 MITADVLADDQEYADVLADIHEECSKHGTV 335
>gi|237841109|ref|XP_002369852.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211967516|gb|EEB02712.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 538
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP 66
L ++ +V P LK+++EY+D+ ED+KE C K G + + + P VP
Sbjct: 437 LRIMQIVDPSTLKEQEEYDDLLEDVKEGCEKAGKIVNAVVISPKVKDQVP 486
>gi|156094523|ref|XP_001613298.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802172|gb|EDL43571.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1050
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIP 57
P R VL + T DEL D EY DI EDI+ EC K+G V + +P
Sbjct: 825 PTRAVVLS--KIATFDELLDSGEYRDIVEDIRVECQKFGSVIEVVLP 869
>gi|70954273|ref|XP_746191.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526725|emb|CAH88205.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 686
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIP 57
V+ L + T DEL + ++Y++I EDIK EC KYG V + +P
Sbjct: 496 VVVLSKIATFDELSNPEDYKEISEDIKIECEKYGPVLEVVLP 537
>gi|169602913|ref|XP_001794878.1| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
gi|160706286|gb|EAT88221.2| hypothetical protein SNOG_04461 [Phaeosphaeria nodorum SN15]
Length = 594
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
V+CL+NMVT DEL +++EYE+I EDI+EEC KYG + +IPRP G GK
Sbjct: 497 VVCLMNMVTSDELINDEEYEEIKEDIEEECQKYGPIVETKIPRPAGARSSLGVGK 551
>gi|147795302|emb|CAN69457.1| hypothetical protein VITISV_036574 [Vitis vinifera]
Length = 630
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 16 VLCLLNMVTPDELKD--EDEYEDICEDIKEECNKYGIVRSLEI 56
VL L N+V PD+L E E E+I EDI+ EC ++G V+S+ I
Sbjct: 359 VLKLKNVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNI 401
>gi|241951030|ref|XP_002418237.1| RNA-binding protein, putative; splicing factor U2AF. large subunit,
putative [Candida dubliniensis CD36]
gi|223641576|emb|CAX43537.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 749
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+ LLN V+ EL D Y I D+ E +KYG V S+ IPRP
Sbjct: 645 VIRLLNAVSESELTDNATYSFIKNDMYNEASKYGEVVSIRIPRP 688
>gi|221504342|gb|EEE30017.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 481
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP 66
L ++ +V P LK+++EY+D+ ED+KE C K G + + + P VP
Sbjct: 380 LRIMQIVDPSTLKEQEEYDDLLEDVKEGCEKAGKIVNAVVISPKVKDQVP 429
>gi|221483634|gb|EEE21946.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 488
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP 66
L ++ +V P LK+++EY+D+ ED+KE C K G + + + P VP
Sbjct: 387 LRIMQIVDPSTLKEQEEYDDLLEDVKEGCEKAGKIVNAVVISPKVKDQVP 436
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 17 LCLLNMVTPDELK---DEDEYEDICEDIKEECNKYGIVRSL 54
L L NM +P++ D D + DI ED+KEEC+KYG + +
Sbjct: 877 LVLCNMFSPNDENIGSDPDFFSDIIEDVKEECSKYGSITKI 917
>gi|124810295|ref|XP_001348830.1| U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
gi|23497731|gb|AAN37269.1|AE014827_12 U2 snRNP auxiliary factor, putative [Plasmodium falciparum 3D7]
Length = 833
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD-VPGCGKATL 73
V+ L N V ++L + +YE+I +++KEE KYG ++++ IP+P +++ G GK L
Sbjct: 732 VVQLTNAVFQEDLIVDSQYEEILKEVKEEAEKYGTLQNIVIPKPNKDLSYTEGVGKIFL 790
>gi|389585114|dbj|GAB67845.1| splicing factor [Plasmodium cynomolgi strain B]
Length = 877
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 17 LCLLNMVTPDELK---DEDEYEDICEDIKEECNKYGIVRSL 54
L L NM +P++ D D + DI ED+KEEC+KYG V +
Sbjct: 784 LVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYGSVTKI 824
>gi|429328959|gb|AFZ80718.1| hypothetical protein BEWA_001250 [Babesia equi]
Length = 711
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR--------PIENVDVPG 67
V+ LLN+V P+++ D+ Y ++ ++IKEE KYG + + IPR IE+V G
Sbjct: 570 VVQLLNVVYPEDILDDKNYREMLKEIKEEAQKYGPLEEIYIPRIHKREEPASIEDVKTEG 629
Query: 68 CGKATL 73
K +
Sbjct: 630 NDKVAV 635
>gi|452001453|gb|EMD93912.1| hypothetical protein COCHEDRAFT_1020092 [Cochliobolus
heterostrophus C5]
Length = 352
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+CL+NMVT DEL +++EYE+I EDI+EEC KYG + +IPRP
Sbjct: 255 VVCLMNMVTSDELLNDEEYEEIKEDIEEECGKYGTILETKIPRP 298
>gi|354546848|emb|CCE43580.1| hypothetical protein CPAR2_212240 [Candida parapsilosis]
Length = 649
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-------IEN 62
P +V+ L+N V+ +L D+ + +DIK+E +++G V S++IPRP ++
Sbjct: 539 PRASSNVVQLINAVSIKDLMDDSNVRFLHKDIKDEASQFGTVVSIKIPRPANDFTPGLQQ 598
Query: 63 VDVPGCGK 70
+++ G GK
Sbjct: 599 LNIAGLGK 606
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 17 LCLLNMVTPDELK---DEDEYEDICEDIKEECNKYGIV 51
L L NM +P++ D D + DI ED+KEEC+KYG +
Sbjct: 923 LVLCNMFSPNDESIGSDPDFFTDIIEDVKEECSKYGSI 960
>gi|84996015|ref|XP_952729.1| splicing factor [Theileria annulata strain Ankara]
gi|65303726|emb|CAI76103.1| splicing factor, putative [Theileria annulata]
Length = 380
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGK 70
V+ LLNMV ++L + Y +I +KEE KYG ++ + IPRP +++ G GK
Sbjct: 278 VIQLLNMVFHEDLISDYNYNEIVRLVKEEAQKYGPLQEVVIPRPDKDLTFKEGVGK 333
>gi|451849636|gb|EMD62939.1| hypothetical protein COCSADRAFT_200575 [Cochliobolus sativus
ND90Pr]
Length = 576
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+CL+NMVT DEL +++EYE+I EDI+EEC KYG + +IPRP
Sbjct: 479 VVCLMNMVTSDELLNDEEYEEIKEDIEEECGKYGTILETKIPRP 522
>gi|224003073|ref|XP_002291208.1| U2 snRNP auxillary splicing factor, U2AF subunit [Thalassiosira
pseudonana CCMP1335]
gi|220972984|gb|EED91315.1| U2 snRNP auxillary splicing factor, U2AF subunit, partial
[Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 3 PPWDRLVPPLRF------SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
PP L PP +L LLNMV ++L ++ + + E+++EE KYG + S++I
Sbjct: 238 PP---LAPPTAMPGSTVTRILVLLNMVMDEDLATAEDRKFLEEEVREEVGKYGTLLSMKI 294
Query: 57 PRPIE 61
P P E
Sbjct: 295 PMPHE 299
>gi|328850276|gb|EGF99443.1| hypothetical protein MELLADRAFT_31912 [Melampsora larici-populina
98AG31]
Length = 79
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 27 ELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
EL D++EY++I EDI EEC+KY + ++IPRP +N
Sbjct: 1 ELVDDEEYKEILEDIIEECSKYVKIEDVKIPRPKKN 36
>gi|401399659|ref|XP_003880603.1| novel protein (Zgc:77804), related [Neospora caninum Liverpool]
gi|325115014|emb|CBZ50570.1| novel protein (Zgc:77804), related [Neospora caninum Liverpool]
Length = 460
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP 66
L ++ +V P LK+E++Y+D+ ED+KE C K G + + + P VP
Sbjct: 358 LRIMQIVDPATLKEEEDYDDLLEDVKEGCEKAGKIVNAVVVSPKIKAQVP 407
>gi|71028054|ref|XP_763670.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large subunit
[Theileria parva strain Muguga]
gi|68350624|gb|EAN31387.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large
subunit, putative [Theileria parva]
Length = 380
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGK 70
V+ LLNMV ++L + Y +I +KEE KYG ++ + IPRP +++ G GK
Sbjct: 278 VIQLLNMVFHEDLISDYNYNEIVRLVKEEAQKYGPLQEVVIPRPDKDLTFKEGVGK 333
>gi|122245119|sp|Q2QKB3.1|U2A2A_WHEAT RecName: Full=Splicing factor U2af large subunit A; AltName:
Full=U2 auxiliary factor 65 kDa subunit A; AltName:
Full=U2 small nuclear ribonucleoprotein auxiliary factor
large subunit A; Short=U2 snRNP auxiliary factor large
subunit A
gi|68036924|gb|AAY84881.1| U2AF large subunit [Triticum aestivum]
Length = 591
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKY 48
L V+CL +V+ D+L+D++EY DI ED+ E +KY
Sbjct: 502 LTTKVVCLTQVVSADDLRDDEEYNDILEDMTLEGHKY 538
>gi|403224363|dbj|BAM42493.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 377
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV-PGCGKATL 73
V+ LLNMV ++L + Y +I KEE KYG + + +PRP +++ G GK L
Sbjct: 275 VVQLLNMVFSEDLLSDYNYNEIVRLTKEEAGKYGALDEIVVPRPSKDLTFKSGVGKVFL 333
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEEC-NKYGIVRSLEIPR 58
SVL LLNM PDE + D +D+ +D+K EC +KYG V +L+I +
Sbjct: 491 SVL-LLNMFDPDEETEPDWDKDLADDVKGECASKYGPVTALKIEK 534
>gi|398009632|ref|XP_003858015.1| hypothetical protein, conserved [Leishmania donovani]
gi|322496219|emb|CBZ31291.1| hypothetical protein, conserved [Leishmania donovani]
Length = 923
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLN+ +EL + Y + DI+EE KYG V+ L +PR
Sbjct: 699 VLVLLNLFDEEELVYDSNYSQLLADIEEEVEKYGRVKRLVVPR 741
>gi|255089803|ref|XP_002506823.1| predicted protein [Micromonas sp. RCC299]
gi|226522096|gb|ACO68081.1| predicted protein [Micromonas sp. RCC299]
Length = 554
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 19 LLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
L NMVT +EL D E +I ED +EEC +G + + +P P
Sbjct: 458 LTNMVTREELTDPTEAREILEDTQEECAGFGELTRVVMPLP 498
>gi|303283510|ref|XP_003061046.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457397|gb|EEH54696.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 378
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 19 LLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCG 69
L MV+ +EL D E +I ED +EEC +G + + +PRP + D+ G
Sbjct: 279 LKGMVSREELADPTEAAEILEDTEEECKGFGSLVKVLMPRPGPHPDLDPVG 329
>gi|339896793|ref|XP_003392193.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398876|emb|CBZ08325.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 857
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLN+ +EL + Y + DI+EE KYG V+ L +PR
Sbjct: 633 VLVLLNLFDEEELVYDSNYSQLLADIEEEVEKYGRVKRLVVPR 675
>gi|294954867|ref|XP_002788334.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large
subunit, putative [Perkinsus marinus ATCC 50983]
gi|239903646|gb|EER20130.1| U2 small nuclear ribonucleoprotein, auxiliary factor, large
subunit, putative [Perkinsus marinus ATCC 50983]
Length = 543
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+V+ LLN V ++L E E + I ++I+EE ++G V + +PRP
Sbjct: 366 TVVQLLNAVYIEDLMSETEVKSIEDEIREEAQRHGTVLEVRVPRP 410
>gi|221052716|ref|XP_002261081.1| RNA binding domain [Plasmodium knowlesi strain H]
gi|194247085|emb|CAQ38269.1| RNA binding domain [Plasmodium knowlesi strain H]
Length = 1014
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIP 57
P R VL + T EL D EY DI EDIK EC K+G V + +P
Sbjct: 788 PTRTVVLS--KIATFHELSDPTEYRDIVEDIKVECEKFGSVIEVVLP 832
>gi|20466772|gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
Length = 420
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 11 PLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYG 49
P+ CLL NM P ++D EDI ED+KEEC+K+G
Sbjct: 318 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 358
>gi|401414445|ref|XP_003871720.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487939|emb|CBZ23185.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 848
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLN+ +EL + Y + DI+EE KYG V+ L +PR
Sbjct: 620 VLVLLNLFDEEELVYDSNYSQLLADIEEEVEKYGRVKRLVVPR 662
>gi|389592574|ref|XP_003721728.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438261|emb|CBZ12014.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 851
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLN+ +EL + Y + DI+EE KYG V+ L +PR
Sbjct: 627 VLVLLNLFDEEELVYDSNYSQLLADIEEEVEKYGRVKQLVVPR 669
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P V+ L NMV PD++ E + E+I+EEC+K+GIV + I + EN D
Sbjct: 535 RLMRPQDSRVIILRNMVGPDDVD-----ETLQEEIQEECSKFGIVSRVIIFNEKQTENED 589
>gi|189204129|ref|XP_001938400.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985499|gb|EDU50987.1| splicing factor U2AF 65 kDa subunit [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 572
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+CL+NMVT DEL +++EYE+I EDI+EEC KYG + +IPRP
Sbjct: 475 VVCLMNMVTSDELLNDEEYEEIKEDIEEECGKYGPIVETKIPRP 518
>gi|403345499|gb|EJY72120.1| Splicing factor U2af large subunit, putative [Oxytricha trifallax]
Length = 437
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI---ENVDVPGCGK 70
L L N + +E+ + D+Y+D+ ++EE ++YG V + PRP + VPG GK
Sbjct: 337 LMLKNCIILEEMTERDDYKDLEIAVEEEMSRYGKVVKVHCPRPPIFGDPYSVPGVGK 393
>gi|71021011|ref|XP_760736.1| hypothetical protein UM04589.1 [Ustilago maydis 521]
gi|46100129|gb|EAK85362.1| hypothetical protein UM04589.1 [Ustilago maydis 521]
Length = 688
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
V+ LLNM + +L D Y+D+ +D+ EEC+K+G V+ +
Sbjct: 564 VIVLLNMASAQDLVG-DSYQDLVQDVTEECSKFGYVQRV 601
>gi|71032941|ref|XP_766112.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353069|gb|EAN33829.1| hypothetical protein, conserved [Theileria parva]
Length = 431
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 11 PLRFS--VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIEN 62
P FS L L+ +V P+ ++ E EY D+ +D+KEE K+G ++S I P N
Sbjct: 312 PANFSGRYLHLVQIVLPETVEAEVEYLDVLDDVKEEFGKHGKIKSALIIAPRHN 365
>gi|154331631|ref|XP_001561633.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134058952|emb|CAM36779.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 832
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
VL LLN+ +EL + Y + DI+EE KYG V+ L +PR
Sbjct: 609 VLVLLNLFDEEELVYDSNYSQLLADIEEEVEKYGRVKRLVVPR 651
>gi|297837403|ref|XP_002886583.1| hypothetical protein ARALYDRAFT_338287 [Arabidopsis lyrata subsp.
lyrata]
gi|297332424|gb|EFH62842.1| hypothetical protein ARALYDRAFT_338287 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 17/72 (23%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--------------IE 61
++CL +VT D L++ +EY DI +++E K+G + ++ IPRP +E
Sbjct: 136 IVCLSQLVTIDNLRNYEEYADI---MRQEGGKFGNLVNVVIPRPNPDHGPTPGVGNVFLE 192
Query: 62 NVDVPGCGKATL 73
DV G KA L
Sbjct: 193 YADVDGSSKARL 204
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 38.1 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 15 SVLCLLNMVTPDELK---DEDEYEDICEDIKEECNKYG 49
S + L NM +P++ D D + DI ED++EEC+KYG
Sbjct: 440 SNIVLCNMFSPNDSNIGSDPDFFSDIIEDVREECSKYG 477
>gi|294948294|ref|XP_002785691.1| splicing factor u2af large subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239899714|gb|EER17487.1| splicing factor u2af large subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 370
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+V+ LLN V ++L E E + I ++I+EE ++G V + +PRP
Sbjct: 193 TVVQLLNAVYIEDLMSETEVKSIEDEIREEAQRHGTVLEVRVPRP 237
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Query: 4 PWDRLVPPLRFSVLCLLNMVTPDELK---DEDEYEDICEDIKEECNKYG 49
P + + P + VLC NM +P++ D D + DI ED++EEC+KYG
Sbjct: 597 PLNNITPNI---VLC--NMFSPNDSSIGSDPDFFSDIIEDVREECSKYG 640
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 11 PLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYG 49
P+ CLL NM P ++D EDI ED+KEEC+K+G
Sbjct: 508 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 548
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 11 PLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYG 49
P+ CLL NM P ++D EDI ED+KEEC+K+G
Sbjct: 459 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 499
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 11 PLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYG 49
P+ CLL NM P ++D EDI ED+KEEC+K+G
Sbjct: 458 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 498
>gi|440792998|gb|ELR14199.1| U2 snRNP auxilliary factor, large subunit, splicing factor
subfamily protein [Acanthamoeba castellanii str. Neff]
Length = 462
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 23 VTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
V P+EL ++++ DI ED+++EC KYG V S+
Sbjct: 386 VRPEELVSDEDHADIVEDVRQECEKYGNVMSV 417
>gi|303279518|ref|XP_003059052.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460212|gb|EEH57507.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 515
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
P+ L L N+ P E + + + DI ED+K+EC K+G V + + E
Sbjct: 419 PIPTQTLLLKNLFDPKEETEPEWWNDIAEDVKDECGKHGAVAHCHVDKDSE 469
>gi|262348230|gb|ACY56333.1| putative splicing factor u2af large subunit, partial [Monascus
ruber]
Length = 90
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 28 LKDEDEY---EDICEDIKEECNKYGIVRSLEIPRPIE-NVDVPGCGK 70
L+D +E +I +D+++EC+KYG + L+IPRP PG GK
Sbjct: 1 LRDSNEAPFITEIMDDVRDECSKYGTILELKIPRPTTGGRQSPGVGK 47
>gi|255082273|ref|XP_002508355.1| predicted protein [Micromonas sp. RCC299]
gi|226523631|gb|ACO69613.1| predicted protein [Micromonas sp. RCC299]
Length = 518
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
P+ L L NM P E + + + DI ED+K+EC+K+G V + + +
Sbjct: 422 PIPTQCLLLKNMFDPAEETEPEWWIDIGEDVKDECSKHGPVSHIHVDK 469
>gi|428671141|gb|EKX72059.1| splicing factor subunit, putative [Babesia equi]
Length = 391
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
L ++ +V P+ ++ E EY D+ +D+KEE KYG ++S I P
Sbjct: 279 LHIVQIVLPESIEAEVEYLDVLDDVKEEFEKYGKIKSAAIVIP 321
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
RL+ P V+ L NMV P ED E + ++I+EEC KYG+V + I
Sbjct: 551 RLMRPRESKVVILRNMVGP-----EDVDETLQDEIQEECGKYGLVERVII 595
>gi|448513520|ref|XP_003866980.1| hypothetical protein CORT_0A11570 [Candida orthopsilosis Co 90-125]
gi|380351318|emb|CCG21542.1| hypothetical protein CORT_0A11570 [Candida orthopsilosis Co 90-125]
Length = 650
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP-------IENVDVPGC 68
V+ L+N V+ +L D+ + + D+K E +++G V S++IPRP ++ ++V G
Sbjct: 546 VVQLINAVSIKDLMDDSNVKFLYNDMKAEASQFGTVVSIKIPRPANDFTPGLQQLNVAGL 605
Query: 69 GK 70
GK
Sbjct: 606 GK 607
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 12 LRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV 65
+R V+ L NMVTP E+ E + ++++EEC+K+G ++ +E+ E V +
Sbjct: 440 IRSPVVLLSNMVTPSEVDGE-----LKDEVREECSKFGSIKRVEVHTLKETVRI 488
>gi|194747299|ref|XP_001956090.1| GF25032 [Drosophila ananassae]
gi|190623372|gb|EDV38896.1| GF25032 [Drosophila ananassae]
Length = 643
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 535 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 589
>gi|334184261|ref|NP_001189537.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251465|gb|AEC06559.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 599
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 11 PLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYG 49
P+ CLL NM P ++D EDI ED+KEEC+K+G
Sbjct: 497 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 537
>gi|393909310|gb|EFO18950.2| Poly(U)-binding-splicing factor half pint [Loa loa]
Length = 769
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV 65
+L+ R +V+ L NMVT +E DE E E I++ECNKYG V+ + I + N V
Sbjct: 670 KLMRTNRSTVIVLRNMVTIEECDDELEGE-----IRDECNKYGKVQEVVIAQDPANGSV 723
>gi|312086552|ref|XP_003145121.1| Poly(U)-binding-splicing factor half pint [Loa loa]
gi|393909311|gb|EJD75402.1| Poly(U)-binding-splicing factor half pint, variant [Loa loa]
Length = 765
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV 65
+L+ R +V+ L NMVT +E DE E E I++ECNKYG V+ + I + N V
Sbjct: 666 KLMRTNRSTVIVLRNMVTIEECDDELEGE-----IRDECNKYGKVQEVVIAQDPANGSV 719
>gi|67624203|ref|XP_668384.1| RNA-binding protein SiahBP [Cryptosporidium hominis TU502]
gi|54659576|gb|EAL38146.1| RNA-binding protein SiahBP [Cryptosporidium hominis]
Length = 615
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
+++ L NMV PDE+ DE + E++K EC+KYG V + I
Sbjct: 520 NIILLTNMVGPDEIDDE-----LKEEVKIECSKYGKVYDVRI 556
>gi|66362264|ref|XP_628096.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|46227417|gb|EAK88352.1| Ro ribonucleoprotein-binding protein 1, RNA binding protein with 3x
RRM domains [Cryptosporidium parvum Iowa II]
gi|323508937|dbj|BAJ77361.1| cgd1_2730 [Cryptosporidium parvum]
gi|323510323|dbj|BAJ78055.1| cgd1_2730 [Cryptosporidium parvum]
Length = 693
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
+++ L NMV PDE+ DE + E++K EC+KYG V + I
Sbjct: 598 NIILLTNMVGPDEIDDE-----LKEEVKIECSKYGKVYDVRI 634
>gi|68059894|ref|XP_671927.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56488550|emb|CAI03739.1| hypothetical protein PB301327.00.0 [Plasmodium berghei]
Length = 203
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV 65
V+ L + T +EL + ++Y++I EDIK EC KYG V LE+ PI ++D
Sbjct: 6 VIVLSKIATFEELSNPEDYKEISEDIKIECEKYGPV--LEVVLPIISIDA 53
>gi|323507689|emb|CBQ67560.1| related to RNA-binding region containing protein 2 [Sporisorium
reilianum SRZ2]
Length = 659
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECN-KYGIVRSLEIPR 58
+P + L L NM P E + D D+ ED+KEEC KYG V S+ + +
Sbjct: 561 IPESTSTSLLLKNMFNPAEETEPDWDTDLAEDVKEECQAKYGRVTSIHVEK 611
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
RL+ P V+ L NMV P ED E + ++I++EC KYGIV + I
Sbjct: 562 RLMRPRESKVVILRNMVGP-----EDVDETLQDEIQDECGKYGIVERVII 606
>gi|294878000|ref|XP_002768233.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239870430|gb|EER00951.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 638
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 16 VLCLLNMV-TPDELKDEDEYEDICEDIKEECNKY---GIVRSLEIPRPIENVDVP 66
VL + N + +EL D+ Y D+ +DIK EC VRS+ IPRP N +P
Sbjct: 410 VLVMTNFAGSVEELLDDINYSDLMDDIKVECKSITGGADVRSIIIPRPETNTTIP 464
>gi|170581558|ref|XP_001895732.1| RNA binding protein [Brugia malayi]
gi|158597207|gb|EDP35417.1| RNA binding protein, putative [Brugia malayi]
Length = 275
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV 65
+L+ R +V+ L NMVT +E DE E E I++ECNKYG V+ + I + N V
Sbjct: 176 KLMRTNRSTVIVLKNMVTIEECDDELEGE-----IRDECNKYGKVQEVVIAQDPANGSV 229
>gi|340056956|emb|CCC51295.1| putative RNA-binding protein, fragment [Trypanosoma vivax Y486]
Length = 883
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
VP +L LLN+ +EL ++ YE + +I EE KYG V+SL
Sbjct: 596 VPIFPTRILVLLNLFDEEELVLDETYERLVSEIAEEVEKYGRVKSL 641
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIV 51
+L+ R SV+ L NMVTPD++ DEY + +I+EEC K+G V
Sbjct: 658 KLMRTNRSSVIVLRNMVTPDDI---DEYLE--GEIREECGKFGTV 697
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIV 51
+L+ R SV+ L NMVTPD++ DEY + +I+EEC K+G V
Sbjct: 658 KLMRTNRSSVIVLRNMVTPDDI---DEYLE--GEIREECGKFGTV 697
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P V+ L NMV PD++ E + E+I+EEC+K+G V + I + EN D
Sbjct: 508 RLMRPQDSRVIILRNMVGPDDVD-----ETLQEEIQEECSKFGTVSRVIIFNEKQTENED 562
>gi|84998934|ref|XP_954188.1| splicing factor [Theileria annulata]
gi|65305186|emb|CAI73511.1| splicing factor, putative [Theileria annulata]
Length = 425
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 11 PLRFS--VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
P FS L L+ +V P+ ++ E EY D+ +D+KEE K+G ++S I P
Sbjct: 306 PANFSGRYLHLVQIVLPETVEAEVEYLDVLDDVKEEFGKHGKIKSALIIAP 356
>gi|396472864|ref|XP_003839217.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
gi|312215786|emb|CBX95738.1| hypothetical protein LEMA_P028900.1 [Leptosphaeria maculans JN3]
Length = 587
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 36/44 (81%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
V+CL+NMVT +EL +++EYE+I EDI+EEC K+G + +IPRP
Sbjct: 490 VICLMNMVTSEELINDEEYEEIKEDIEEECGKFGTILETKIPRP 533
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P V+ L NMV P ED E + E+I+EEC K+G V + I + EN D
Sbjct: 503 RLMRPQESRVIILRNMVGP-----EDVDETLQEEIQEECTKFGTVSRVIIFNEKQTENED 557
>gi|393220899|gb|EJD06384.1| hypothetical protein FOMMEDRAFT_45167, partial [Fomitiporia
mediterranea MF3/22]
Length = 244
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIE 61
L +L++ D+ D+ EYEDI ++EC G V L IP+P+E
Sbjct: 166 LLMLDIGLADDSVDDQEYEDI----RKECTNLGAVEDLRIPQPVE 206
>gi|24655233|ref|NP_728610.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|24655237|ref|NP_728611.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|24655242|ref|NP_728612.1| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|281365434|ref|NP_001163315.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|281365436|ref|NP_001163316.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|281365438|ref|NP_001163317.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|281365440|ref|NP_001163318.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|281365442|ref|NP_001163319.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|281365444|ref|NP_001163320.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
gi|7292089|gb|AAF47502.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|10727221|gb|AAG22221.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|16768670|gb|AAL28554.1| HL02140p [Drosophila melanogaster]
gi|23092776|gb|AAG22222.2| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|27820105|gb|AAO25077.1| GH01086p [Drosophila melanogaster]
gi|220953270|gb|ACL89178.1| pUf68-PB [synthetic construct]
gi|272454997|gb|ACZ94587.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|272454998|gb|ACZ94588.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|272454999|gb|ACZ94589.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|272455000|gb|ACZ94590.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|272455001|gb|ACZ94591.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|272455002|gb|ACZ94592.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
Length = 545
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 437 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 491
>gi|328770116|gb|EGF80158.1| hypothetical protein BATDEDRAFT_11758 [Batrachochytrium
dendrobatidis JAM81]
Length = 389
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 8 LVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
+VP + + L NM P+ + + ++I ED+KEEC K+G + + +
Sbjct: 289 VVPTMETRCVLLKNMFNPENEVESNWVQEIEEDVKEECTKFGKILHISV 337
>gi|6118522|gb|AAF04132.1|AF190745_1 poly-U binding splicing factor [Drosophila melanogaster]
Length = 637
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 529 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 583
>gi|195336594|ref|XP_002034920.1| GM14211 [Drosophila sechellia]
gi|194128013|gb|EDW50056.1| GM14211 [Drosophila sechellia]
Length = 616
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 508 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 562
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECN-KYGIVRSLEIPR 58
+P + L L NM P E ++ +D+ ED+K+EC+ KYG V S+ + +
Sbjct: 580 IPESTSTSLLLKNMFNPAEETEQGWDKDLAEDVKDECHAKYGAVTSIHVEK 630
>gi|237830635|ref|XP_002364615.1| splicing factor U2AF 65 kDa subunit, putative [Toxoplasma gondii
ME49]
gi|211962279|gb|EEA97474.1| splicing factor U2AF 65 kDa subunit, putative [Toxoplasma gondii
ME49]
gi|221487696|gb|EEE25928.1| splicing factor U2AF 65 kDa subunit, putative [Toxoplasma gondii
GT1]
gi|221507490|gb|EEE33094.1| splicing factor U2AF 65 kDa subunit, putative [Toxoplasma gondii
VEG]
Length = 414
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 19 LLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
++ + P +++ ++EY++I DI ECNKYG + I RP
Sbjct: 187 VVRIACPSKIERDEEYDEILSDILAECNKYGHALAALIIRP 227
>gi|195490418|ref|XP_002093131.1| GE20955 [Drosophila yakuba]
gi|194179232|gb|EDW92843.1| GE20955 [Drosophila yakuba]
Length = 637
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 529 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 583
>gi|24655228|ref|NP_525123.2| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
gi|41688713|sp|Q8T6B9.2|PUF68_DROME RecName: Full=Poly(U)-binding-splicing factor half pint;
Short=Protein half pint; AltName: Full=68 kDa
poly(U)-binding-splicing factor; AltName: Full=PUF60
homolog
gi|7292088|gb|AAF47501.1| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
Length = 637
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 529 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 583
>gi|428167652|gb|EKX36608.1| hypothetical protein GUITHDRAFT_117273 [Guillardia theta CCMP2712]
Length = 828
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNK-YGIVRSLEIPRPI 60
VL L N+++ EL+DE E D+ ED +E+C + +G V+S + P+
Sbjct: 735 VLVLSNLLSEAELQDEQESLDVLEDTREKCEQEFGEVQSAVVITPL 780
>gi|320169913|gb|EFW46812.1| HIV TAT specific factor 1 [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 5 WDRLVP---PLRFSVLCLLNMVTPDELKDE-DEYEDICEDIKEECNKYGIVRSLEI 56
WD VP S + + N+ +P+E D +E ++ ED++ EC K G+VR + I
Sbjct: 401 WDEFVPMENKRGASTVIISNVFSPEEFDDNPNELNELKEDMESECGKCGVVRKVTI 456
>gi|297836410|ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
gi|297331927|gb|EFH62346.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata]
Length = 557
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 8 LVPPLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYG 49
++ P+ CLL NM P ++D +DI ED+KEEC+K+G
Sbjct: 452 VIDPVGVPSECLLLKNMFDPSTQTEDDFDKDIEEDVKEECSKFG 495
>gi|156085070|ref|XP_001610018.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
gi|154797270|gb|EDO06450.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
Length = 383
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVP-GCGKATL 73
++ L+N+V ++L + Y ++ + I EE KYG + + IPRP +++ G GK L
Sbjct: 281 IVQLINIVFHEDLIQDKRYHEVKDAIMEEAKKYGHLEDIVIPRPNDDLSYKEGVGKVFL 339
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P V+ L NMV PD++ E + E+I+EEC+K+G V + I + EN D
Sbjct: 537 RLMRPQDSRVIILRNMVGPDDVD-----ETLQEEIQEECSKFGTVSRVIIFNEKQTENED 591
>gi|19224321|gb|AAL86452.1|AF479079_1 half pint [Drosophila melanogaster]
Length = 637
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I
Sbjct: 529 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVII 573
>gi|198437801|ref|XP_002129262.1| PREDICTED: similar to RNA binding motif protein 17 [Ciona
intestinalis]
Length = 378
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIV 51
V+CL NMV P E+ D+ E E KEEC+KYG V
Sbjct: 282 VICLRNMVGPGEVDDDLEAE-----TKEECSKYGSV 312
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
L L NM P D D DI +D++EEC+K+G+V+ +
Sbjct: 271 LLLKNMFDPSTESDPDFDMDIKDDVQEECSKFGVVKHI 308
>gi|190344417|gb|EDK36087.2| hypothetical protein PGUG_00185 [Meyerozyma guilliermondii ATCC
6260]
Length = 359
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 17 LCLLNMVTPDELKDEDEYE-DICEDIKEECNKYGIVRSL 54
L + NM +ELK++ E DI EDIK EC+KYGI S+
Sbjct: 260 LVIENMFRVEELKNDKYLESDIIEDIKSECDKYGIGSSV 298
>gi|194864858|ref|XP_001971142.1| GG14596 [Drosophila erecta]
gi|190652925|gb|EDV50168.1| GG14596 [Drosophila erecta]
Length = 731
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P+ V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 623 RLMRPVDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 677
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
+P + L NM P+E D D D+ DIK EC KYG V +++
Sbjct: 358 IPTASTRYVMLNNMFNPNEETDPDWVSDLEADIKIECEKYGRVEHIKV 405
>gi|146421728|ref|XP_001486808.1| hypothetical protein PGUG_00185 [Meyerozyma guilliermondii ATCC
6260]
Length = 359
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 17 LCLLNMVTPDELKDEDEYE-DICEDIKEECNKYGIVRSL 54
L + NM +ELK++ E DI EDIK EC+KYGI S+
Sbjct: 260 LVIENMFRVEELKNDKYLESDIIEDIKSECDKYGIGSSV 298
>gi|402587582|gb|EJW81517.1| hypothetical protein WUBG_07571 [Wuchereria bancrofti]
Length = 493
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDV 65
+L+ R +V+ L NMVT +E DE E E I++ECNKYG V+ + I + N V
Sbjct: 394 KLMRTNRSTVIVLRNMVTIEECDDELEGE-----IRDECNKYGKVQEVVIAQDPANGSV 447
>gi|298705062|emb|CBJ28521.1| U2 small nuclear ribonucleoprotein auxiliary factor large subunit
[Ectocarpus siliculosus]
Length = 301
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP--IENVDVPGC 68
P + L L NM+T +L DE + DI E+ KEEC K+G V+S+ IPRP + PG
Sbjct: 177 PRPTTTLRLNNMLTAGDLADESSFGDIEEETKEECEKFGSVKSVHIPRPSTTSEAEKPGV 236
Query: 69 G 69
G
Sbjct: 237 G 237
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 8 LVPPLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
+V P+ CLL NM P + D DI ED++EEC+KYG V+ + + +
Sbjct: 289 VVEPVGVPSECLLLKNMFDPSTETEPDFDLDIKEDVEEECSKYGRVKHIYVDK 341
>gi|399216014|emb|CCF72702.1| unnamed protein product [Babesia microti strain RI]
Length = 487
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 28 LKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
L+++ EY+++ EDI+ EC+ G V +E+PR
Sbjct: 393 LQNDREYQEVIEDIRAECDLMGQVERVEVPR 423
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
P+ L L NM P E + D ++I D+ EEC+KYG V + +
Sbjct: 401 PIPTQCLLLKNMFDPKEETEPDWDQEIATDVTEECSKYGPVSHTHVDK 448
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEEC-NKYGIVRSLEIPRP--------IENVDV 65
SVL L NM P+E + D +D+ +D+K EC KYG V+++++ + E VD
Sbjct: 254 SVL-LKNMFNPEEETERDWDKDLADDVKSECATKYGPVQAIKVEKETQGEIYVLFETVDA 312
Query: 66 PG 67
G
Sbjct: 313 AG 314
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIV 51
RL+ P V+ L NMV P ED E + E+I++EC+KYG V
Sbjct: 533 RLMRPRESKVVILRNMVGP-----EDVDETLQEEIQDECSKYGAV 572
>gi|195167652|ref|XP_002024647.1| GL22585 [Drosophila persimilis]
gi|198467049|ref|XP_001354234.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
gi|194108052|gb|EDW30095.1| GL22585 [Drosophila persimilis]
gi|198149485|gb|EAL31287.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
Length = 653
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 545 RLMRPTDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 599
>gi|339244819|ref|XP_003378335.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
gi|316972769|gb|EFV56420.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
Length = 609
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPGCGK 70
VL L N+++P+E+ DEY + E+I EEC K+G V + I + N D P K
Sbjct: 515 VLVLRNVISPEEV---DEY--LQEEITEECGKFGEVEQVVIYQEKPNEDAPAIVK 564
>gi|71003261|ref|XP_756311.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
gi|46096316|gb|EAK81549.1| hypothetical protein UM00164.1 [Ustilago maydis 521]
Length = 640
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECN-KYGIVRSLEIPR 58
+P + L L NM P E + + D+ ED+KEEC KYG V S+ + +
Sbjct: 554 IPESTSTSLLLKNMFDPAEETEPNWDTDLAEDVKEECQAKYGPVTSIHVEK 604
>gi|325188176|emb|CCA22716.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 401
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 6/44 (13%)
Query: 11 PLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECN-KYGIVRS 53
P R V+ L NMVTPDE+ D + ++KEEC+ KYG VR+
Sbjct: 304 PQRSRVILLQNMVTPDEVDDH-----LGSEVKEECSQKYGPVRN 342
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 18 CLL--NMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
CLL NM P+ + D DI ED++EEC+KYG V+ + + +
Sbjct: 456 CLLLKNMFDPNTETEPDFDLDIKEDVEEECSKYGRVKHIYVDK 498
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 9 VPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECN-KYGIVRSLEIPR 58
+P + L L NM P E + D +D+ ED+K+EC KYG V + + +
Sbjct: 564 IPEATSTSLLLKNMFDPAEETEADWDKDLAEDVKDECQAKYGPVTRIHVEK 614
>gi|326523595|dbj|BAJ92968.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
L L NM P D D DI +D++EEC+K+G+V+ +
Sbjct: 497 LLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHI 534
>gi|326494786|dbj|BAJ94512.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
L L NM P D D DI +D++EEC+K+G+V+ +
Sbjct: 497 LLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHI 534
>gi|156084160|ref|XP_001609563.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796815|gb|EDO05995.1| hypothetical protein BBOV_II000350 [Babesia bovis]
Length = 409
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 8 LVPPLRFSVLCL--LNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
+VP F+ CL + +V P+ ++ E EY D+ +D+KE K+G V++ I P
Sbjct: 286 IVPLDAFTGSCLRVVQIVLPESVQTEVEYLDVLDDVKEAFEKHGKVKTCAIVTP 339
>gi|428172624|gb|EKX41532.1| hypothetical protein GUITHDRAFT_112506 [Guillardia theta CCMP2712]
Length = 514
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEEC-NKYGIVRSLEIPRP 59
V+ + NM++ D+L ++DE +DI ED +C +YG V I RP
Sbjct: 407 VVVIRNMMSDDDLANDDECKDIAEDTISKCEEEYGKVVRFVIVRP 451
>gi|358335955|dbj|GAA54545.1| poly(U)-binding-splicing factor PUF60 [Clonorchis sinensis]
Length = 511
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIV 51
PP R +L L NMV PD+ DE E E +KEEC YG V
Sbjct: 413 PPPR-GILILRNMVGPDDCDDELENE-----VKEECCNYGSV 448
>gi|326504734|dbj|BAK06658.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSL 54
L L NM P D D DI +D++EEC+K+G+V+ +
Sbjct: 497 LLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHI 534
>gi|302852020|ref|XP_002957532.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
gi|300257174|gb|EFJ41426.1| hypothetical protein VOLCADRAFT_84128 [Volvox carteri f.
nagariensis]
Length = 386
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 11 PLRFSVLCLLNMVTPDELKDE---DEYEDICEDIKEECNKYGIVRSLEIPRPIENVDVPG 67
P+ L + NM P ++E D E+I +D+++EC+KYG V + + + +
Sbjct: 287 PIPTPCLLIKNMFDPAAAQEEMGQDWAEEIAQDVQDECSKYGAVVHIHVDKSSKGCVYLK 346
Query: 68 CG 69
CG
Sbjct: 347 CG 348
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 11 PLRFSVLCLL--NMVTPDELKDEDEYEDICEDIKEEC-NKYGIVRSLEIPRPIE 61
P S C+L NM PDE + D +D+ +D++ EC KYG V L++ + E
Sbjct: 303 PQTLSSRCVLLRNMFDPDEETERDWDKDLADDVRGECEEKYGKVLDLKVEKESE 356
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 7 RLVPPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI--PRPIENVD 64
RL+ P V+ L NMV P ED E + E+I+EEC+K+G V + I + EN D
Sbjct: 523 RLMRPQDSRVIILRNMVGP-----EDVDETLQEEIQEECSKFGTVSRVIIFNEKQTENED 577
>gi|294462032|gb|ADE76571.1| unknown [Picea sitchensis]
Length = 203
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 17 LCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
L L NM P+ + D DI ED+++EC+K+G VR + +
Sbjct: 111 LLLKNMFDPNNETEPDFDLDIKEDVQDECSKFGAVRHIFV 150
>gi|67617167|ref|XP_667532.1| U2 snRNP auxiliary factor [Cryptosporidium hominis TU502]
gi|54658687|gb|EAL37312.1| U2 snRNP auxiliary factor [Cryptosporidium hominis]
Length = 438
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
++ LLN+ P+EL D + Y + ++ E YG + + PRP
Sbjct: 324 IIQLLNIFLPEELVDNEIYNSTLDSVRSEAEVYGTILEIFCPRP 367
>gi|403364994|gb|EJY82272.1| Snrnp splicing factor (U2AF), putative [Oxytricha trifallax]
Length = 411
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPI 60
VL + N+ + + K+E + + DI ++C +G V L+IPRP+
Sbjct: 287 VLNIRNIASLESTKNEYNFCEFYSDIMDKCQAFGKVLELKIPRPV 331
>gi|66358384|ref|XP_626370.1| splicing factor U2AF U2 SnRNP auxiliary factor large subunit, RRM
domain [Cryptosporidium parvum Iowa II]
gi|46227901|gb|EAK88821.1| splicing factor U2AF U2 SnRNP auxiliary factor large subunit, RRM
domain [Cryptosporidium parvum Iowa II]
Length = 438
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRP 59
++ LLN+ P+EL D + Y + ++ E YG + + PRP
Sbjct: 324 IIQLLNIFLPEELVDNEIYNSTLDSVRSEAEVYGTILEIFCPRP 367
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 34.7 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 17 LCLLNMVTPDELK---DEDEYEDICEDIKEECNKYGIV 51
L L NM + ++ D D + DI ED+KEEC+KYG V
Sbjct: 769 LVLSNMFSSNDENIGSDPDFFNDILEDVKEECSKYGKV 806
>gi|334184658|ref|NP_850210.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330253741|gb|AEC08835.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 322
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 15 SVLCLLNMVTPDELKD--EDEYEDICEDIKEECNKYGIVRSLEI 56
++L L N+V P++L E E ++I ED++ EC ++G+++S+ I
Sbjct: 91 NILKLKNVVDPEDLTSFSEQEVKEILEDVRLECARFGVIKSINI 134
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 10 PPLRFSVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
P + + + L NM P + + + + DI ED+ EEC+KYG V + R
Sbjct: 496 PVVASAFMLLKNMFDPAQETEPNFHLDIQEDVTEECSKYGKVLQCHVVR 544
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 18 CLL--NMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
CLL NM P + D DI ED++EEC+KYG V+ + + +
Sbjct: 673 CLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDK 715
>gi|159471948|ref|XP_001694118.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
gi|158277285|gb|EDP03054.1| U2 snRNP auxiliary factor, large subunit [Chlamydomonas
reinhardtii]
Length = 446
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 15 SVLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENV 63
+++ L NMVT ++D+ E ++I +D++ E K G V L P P +V
Sbjct: 276 AIVLLENMVTCGTIRDDTERKEILDDVRAEVVKCGAVLGLAAPMPPAHV 324
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 34.7 bits (78), Expect = 8.4, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 18 CLL--NMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPR 58
CLL NM P + D DI ED++EEC+KYG V+ + + +
Sbjct: 638 CLLLKNMFDPTTETEPDFDLDIKEDVEEECSKYGRVKHIYVDK 680
>gi|170588083|ref|XP_001898803.1| G-patch domain containing protein [Brugia malayi]
gi|158593016|gb|EDP31611.1| G-patch domain containing protein [Brugia malayi]
Length = 373
Score = 34.7 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD 64
+L L NMV+PDE+ D+ E E +K+E KYG V + I R ++ D
Sbjct: 280 ILLLRNMVSPDEIDDQLEPE-----VKDEMKKYGQVNKVVIFRLLQASD 323
>gi|302756127|ref|XP_002961487.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
gi|300170146|gb|EFJ36747.1| hypothetical protein SELMODRAFT_230014 [Selaginella moellendorffii]
Length = 200
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 20 LNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEI 56
LN T D+ K ++ +ED ED+ EE +KYG + SL +
Sbjct: 64 LNGQTMDQKKIQEHFEDFYEDMFEELSKYGEIESLNV 100
>gi|402594800|gb|EJW88726.1| G-patch domain-containing protein [Wuchereria bancrofti]
Length = 373
Score = 34.3 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 16 VLCLLNMVTPDELKDEDEYEDICEDIKEECNKYGIVRSLEIPRPIENVD 64
+L L NMV+PDE+ D+ E E +K+E KYG V + I R ++ D
Sbjct: 280 ILLLRNMVSPDEIDDQLEPE-----VKDEMKKYGQVNKVVIFRLLQASD 323
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.144 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,304,187,122
Number of Sequences: 23463169
Number of extensions: 46113875
Number of successful extensions: 153597
Number of sequences better than 100.0: 696
Number of HSP's better than 100.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 152927
Number of HSP's gapped (non-prelim): 706
length of query: 74
length of database: 8,064,228,071
effective HSP length: 45
effective length of query: 29
effective length of database: 7,008,385,466
effective search space: 203243178514
effective search space used: 203243178514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)