Query psy2207
Match_columns 305
No_of_seqs 226 out of 1518
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 18:56:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mpx_A FYVE, rhogef and PH dom 99.9 9.1E-28 3.1E-32 226.4 4.8 139 1-141 292-432 (434)
2 2coc_A FYVE, rhogef and PH dom 99.9 1.5E-22 5.1E-27 154.8 11.7 97 206-303 4-106 (112)
3 1wi1_A Calcium-dependent activ 99.9 2.5E-22 8.4E-27 154.7 11.7 97 207-304 5-111 (126)
4 1wgq_A FYVE, rhogef and PH dom 99.9 4.1E-21 1.4E-25 146.4 15.1 98 206-303 4-103 (109)
5 1v88_A Oxysterol binding prote 99.9 2.6E-21 8.9E-26 152.2 13.7 96 208-304 6-125 (130)
6 1z2q_A LM5-1; membrane protein 99.8 1E-21 3.4E-26 142.1 5.9 71 72-142 9-80 (84)
7 1x4u_A Zinc finger, FYVE domai 99.8 1.3E-21 4.3E-26 141.6 5.9 70 74-143 4-80 (84)
8 3t7l_A Zinc finger FYVE domain 99.8 1E-21 3.6E-26 143.7 4.8 74 68-142 4-77 (90)
9 4a6h_A Phosphatidylinositol 4, 99.8 5.1E-20 1.7E-24 142.6 12.6 96 210-305 6-120 (120)
10 3lju_X ARF-GAP with dual PH do 99.8 2.3E-19 8E-24 165.8 19.4 94 209-303 268-372 (386)
11 3cxb_B Pleckstrin homology dom 99.8 8E-20 2.7E-24 140.1 13.2 92 212-303 2-101 (112)
12 1pls_A Pleckstrin homology dom 99.8 1.8E-19 6.2E-24 138.0 13.7 96 208-303 3-101 (113)
13 2yw8_A RUN and FYVE domain-con 99.8 4.2E-21 1.4E-25 138.1 4.2 68 74-142 9-76 (82)
14 1dyn_A Dynamin; signal transdu 99.8 1.4E-19 4.7E-24 137.8 12.7 95 209-303 11-117 (125)
15 2p0d_A RHO GTPase-activating p 99.8 2E-19 6.7E-24 141.4 14.0 98 206-303 8-124 (129)
16 1joc_A EEA1, early endosomal a 99.8 4.4E-21 1.5E-25 148.9 3.5 66 74-140 59-124 (125)
17 1x1f_A Signal-transducing adap 99.8 2.5E-19 8.6E-24 143.8 12.9 96 208-304 16-114 (149)
18 2i5f_A Pleckstrin; PH domain, 99.8 5.3E-19 1.8E-23 134.3 13.9 96 208-303 5-109 (109)
19 2yry_A Pleckstrin homology dom 99.8 5.8E-19 2E-23 136.9 13.9 97 208-304 20-121 (122)
20 1vfy_A Phosphatidylinositol-3- 99.8 1E-20 3.4E-25 133.1 3.3 66 73-141 3-69 (73)
21 2dkp_A Pleckstrin homology dom 99.8 8.1E-19 2.8E-23 137.3 14.0 97 208-304 19-120 (128)
22 2d9y_A Pleckstrin homology dom 99.8 1.1E-18 3.7E-23 134.3 14.4 96 208-303 9-109 (117)
23 1v89_A Hypothetical protein KI 99.8 9.5E-19 3.2E-23 134.7 14.1 97 208-304 6-113 (118)
24 1u5d_A SKAP55, SRC kinase-asso 99.8 5.5E-19 1.9E-23 133.8 12.2 95 209-303 2-105 (108)
25 3lju_X ARF-GAP with dual PH do 99.8 3.4E-20 1.2E-24 171.4 6.3 93 210-302 146-245 (386)
26 1upq_A PEPP1; PH domain, phosp 99.8 1.2E-18 4.1E-23 135.3 13.9 95 210-304 11-110 (123)
27 2dhk_A TBC1 domain family memb 99.8 1.4E-18 4.8E-23 134.5 13.9 93 207-302 5-103 (119)
28 3rcp_A Pleckstrin homology dom 99.8 8.9E-19 3.1E-23 131.9 11.4 89 212-303 1-93 (103)
29 1x05_A Pleckstrin; PH domain, 99.8 1.6E-18 5.6E-23 135.8 13.1 98 207-304 15-121 (129)
30 1fao_A Dual adaptor of phospho 99.8 2.1E-18 7.1E-23 134.7 13.2 96 207-303 15-112 (126)
31 2cof_A Protein KIAA1914; PH do 99.8 9.6E-19 3.3E-23 132.8 10.9 95 208-303 6-101 (107)
32 2dn6_A KIAA0640 protein; PH do 99.8 2.7E-18 9.2E-23 131.7 13.2 96 207-303 5-103 (115)
33 1fgy_A GRP1; PH domain, signal 99.8 3.5E-18 1.2E-22 133.3 13.9 94 209-303 4-120 (127)
34 1u5f_A SRC-associated adaptor 99.8 3.9E-18 1.3E-22 137.0 13.9 96 208-303 15-119 (148)
35 2w2x_D 1-phosphatidylinositol- 99.8 1.3E-18 4.4E-23 135.7 10.6 96 208-303 10-119 (124)
36 1wjm_A Beta-spectrin III; PH d 99.8 2.6E-18 9E-23 133.7 12.2 97 207-303 5-117 (123)
37 1v5p_A Pleckstrin homology dom 99.8 3.3E-18 1.1E-22 133.7 12.7 93 211-304 16-121 (126)
38 2d9x_A Oxysterol binding prote 99.8 1.4E-18 4.7E-23 134.7 10.4 93 208-303 6-104 (120)
39 3aj4_A Pleckstrin homology dom 99.8 1.5E-18 5.2E-23 132.6 10.3 95 209-303 4-111 (112)
40 2d9v_A Pleckstrin homology dom 99.8 2.7E-18 9.2E-23 135.0 12.0 96 208-303 6-114 (130)
41 2rsg_A Collagen type IV alpha- 99.8 2.1E-18 7.1E-23 127.7 10.5 88 211-302 2-93 (94)
42 1v5u_A SBF1, SET binding facto 99.8 5.4E-18 1.8E-22 130.4 12.9 96 207-303 5-111 (117)
43 2dtc_A RAL guanine nucleotide 99.8 1.2E-17 4E-22 129.4 13.8 92 211-303 2-112 (126)
44 3pp2_A RHO GTPase-activating p 99.8 1.2E-17 4.1E-22 130.2 13.5 97 207-303 5-123 (124)
45 2cod_A Centaurin-delta 1; ARF 99.8 9.9E-18 3.4E-22 128.7 12.7 90 208-302 6-98 (115)
46 1eaz_A Tandem PH domain contai 99.8 6.9E-18 2.3E-22 131.3 11.5 96 207-303 11-111 (125)
47 1btn_A Beta-spectrin; signal t 99.8 8.6E-18 2.9E-22 126.9 11.7 90 212-301 1-106 (106)
48 3zyq_A Hepatocyte growth facto 99.7 7.2E-19 2.5E-23 150.8 5.9 76 65-143 148-224 (226)
49 2y7b_A Actin-binding protein a 99.7 5.8E-18 2E-22 133.5 10.1 95 209-303 4-128 (134)
50 1unq_A RAC-alpha serine/threon 99.7 3.5E-18 1.2E-22 133.2 8.5 96 208-303 6-110 (125)
51 1wg7_A Dedicator of cytokinesi 99.7 1.1E-17 3.7E-22 134.7 11.3 95 208-303 16-124 (150)
52 1x1g_A Pleckstrin 2; PH domain 99.7 8.1E-18 2.8E-22 131.8 10.3 96 208-303 16-124 (129)
53 1u5e_A SRC-associated adaptor 99.7 2.6E-17 8.9E-22 139.9 14.1 96 208-303 104-208 (211)
54 1dvp_A HRS, hepatocyte growth 99.7 2.1E-18 7.1E-23 147.7 6.9 71 68-141 148-219 (220)
55 1wfk_A Zinc finger, FYVE domai 99.7 1.3E-18 4.6E-23 126.3 4.8 62 81-142 6-67 (88)
56 1dro_A Beta-spectrin; cytoskel 99.7 5.8E-18 2E-22 131.6 8.7 97 208-304 6-120 (122)
57 1btk_A Bruton'S tyrosine kinas 99.7 3.4E-17 1.1E-21 134.5 12.4 94 209-303 2-132 (169)
58 2j59_M RHO-GTPase activating p 99.7 3.5E-17 1.2E-21 134.3 12.1 95 209-304 2-112 (168)
59 2ys3_A UNC-112-related protein 99.7 2.5E-17 8.4E-22 127.5 9.9 94 210-303 9-112 (137)
60 2da0_A 130-kDa phosphatidylino 99.7 8.2E-17 2.8E-21 123.5 12.7 90 209-303 9-101 (114)
61 2lul_A Tyrosine-protein kinase 99.7 9.7E-17 3.3E-21 131.1 13.4 96 207-303 12-121 (164)
62 3tca_A Amyloid beta A4 precurs 99.7 2E-17 6.7E-22 147.4 8.5 96 207-302 165-275 (291)
63 3a8p_A T-lymphoma invasion and 99.7 1.5E-16 5E-21 139.6 13.5 96 208-303 9-124 (263)
64 2rlo_A Centaurin-gamma 1; spli 99.7 2.3E-16 7.8E-21 123.6 10.9 94 210-303 4-124 (128)
65 1y02_A CARP2, FYVE-ring finger 99.7 1.6E-17 5.4E-22 126.8 3.1 63 73-142 8-70 (120)
66 2r09_A Cytohesin-3; autoinhibi 99.7 6.3E-16 2.2E-20 141.0 13.9 94 209-303 212-328 (347)
67 3tfm_A Myosin X; split PH doma 99.7 5.9E-16 2E-20 133.2 12.0 95 206-303 54-155 (228)
68 4f7h_A Fermitin family homolog 99.6 1.5E-15 5.3E-20 120.2 12.5 93 211-303 48-150 (173)
69 1qqg_A IRS-1, insulin receptor 99.6 8.7E-16 3E-20 134.7 11.2 93 207-302 7-111 (264)
70 4bbk_A Kindlin-1, fermitin fam 99.6 3.5E-15 1.2E-19 116.9 12.2 94 210-303 26-129 (165)
71 2q13_A DCC-interacting protein 99.6 2.4E-15 8.2E-20 139.3 12.9 95 207-303 275-375 (385)
72 2fjl_A 1-phosphatidylinositol- 99.6 2.5E-14 8.4E-19 112.9 12.7 95 211-305 2-150 (150)
73 4h8s_A DCC-interacting protein 99.6 6.6E-15 2.2E-19 137.3 10.2 95 207-303 298-398 (407)
74 3a8n_A TIAM-1, T-lymphoma inva 99.5 1.2E-14 4.1E-19 127.3 7.7 96 208-303 9-124 (279)
75 2rov_A RHO-associated protein 99.5 1.3E-13 4.5E-18 105.9 10.1 93 211-303 2-115 (117)
76 2vrw_B P95VAV, VAV1, proto-onc 99.5 5.7E-14 1.9E-18 130.9 8.9 92 10-117 297-391 (406)
77 3hk0_A Growth factor receptor- 99.4 8.6E-12 2.9E-16 108.1 13.2 95 208-302 130-239 (256)
78 2d9w_A Docking protein 2; PH d 99.3 2.4E-11 8.3E-16 92.2 12.7 96 204-301 6-119 (127)
79 4gmv_A RAS-associated and plec 99.3 9.9E-12 3.4E-16 109.0 11.3 95 208-302 156-265 (281)
80 4ejn_A RAC-alpha serine/threon 99.2 1.2E-11 4.3E-16 116.2 8.1 92 209-302 5-107 (446)
81 3ky9_A Proto-oncogene VAV; cal 99.2 2.3E-11 7.7E-16 118.5 7.9 94 8-117 467-563 (587)
82 1w1g_A HPDK1, 3-phosphoinositi 99.1 2.4E-10 8E-15 90.0 9.2 91 206-303 48-139 (151)
83 2coa_A Protein kinase C, D2 ty 98.9 1.7E-08 6E-13 76.4 12.0 95 208-303 6-119 (125)
84 2d9z_A Protein kinase C, NU ty 98.8 4.7E-08 1.6E-12 74.3 11.4 94 209-303 7-123 (129)
85 3tfm_A Myosin X; split PH doma 98.5 3E-07 1E-11 78.6 9.6 38 9-46 118-155 (228)
86 1v5m_A SH2 and PH domain-conta 98.4 1.7E-06 5.8E-11 65.8 9.8 82 221-302 39-129 (136)
87 1zc3_B Exocyst complex protein 98.4 6E-07 2.1E-11 68.0 7.0 46 5-50 66-111 (113)
88 2rlo_A Centaurin-gamma 1; spli 98.4 5.5E-07 1.9E-11 69.7 6.1 40 10-49 87-127 (128)
89 1v61_A RAC/CDC42 guanine nucle 98.4 1.5E-06 5.3E-11 67.3 8.4 97 209-305 27-128 (132)
90 3qwm_A Iqsec1, IQ motif and SE 98.3 1E-06 3.5E-11 68.6 6.8 50 1-50 71-126 (140)
91 3ml4_A Protein DOK-7; tyrosine 98.3 7.5E-06 2.6E-10 68.2 12.3 92 209-301 8-111 (224)
92 2lul_A Tyrosine-protein kinase 98.3 6.7E-07 2.3E-11 72.4 6.0 40 10-49 85-124 (164)
93 2da0_A 130-kDa phosphatidylino 98.3 1.5E-06 5.1E-11 65.7 6.6 44 9-52 64-107 (114)
94 2cof_A Protein KIAA1914; PH do 98.2 2E-06 7E-11 64.2 5.9 44 3-46 57-101 (107)
95 2rsg_A Collagen type IV alpha- 98.2 7.6E-07 2.6E-11 64.8 3.3 38 8-45 56-93 (94)
96 1wg7_A Dedicator of cytokinesi 98.2 5.8E-06 2E-10 65.5 8.0 44 7-50 84-128 (150)
97 1fao_A Dual adaptor of phospho 98.1 3.6E-06 1.2E-10 64.6 6.4 46 3-48 69-114 (126)
98 1wjm_A Beta-spectrin III; PH d 98.1 3.8E-06 1.3E-10 64.3 6.1 41 7-47 77-118 (123)
99 2d9v_A Pleckstrin homology dom 98.1 4E-06 1.4E-10 65.0 6.0 40 7-46 74-114 (130)
100 2dn6_A KIAA0640 protein; PH do 98.1 5.4E-06 1.8E-10 62.4 6.6 43 8-50 65-107 (115)
101 2p0d_A RHO GTPase-activating p 98.1 5E-06 1.7E-10 64.4 6.4 42 7-48 84-126 (129)
102 1u5d_A SKAP55, SRC kinase-asso 98.1 4.1E-06 1.4E-10 62.1 5.6 42 7-48 65-107 (108)
103 2d9x_A Oxysterol binding prote 98.1 3.4E-06 1.2E-10 64.3 4.6 43 9-51 66-109 (120)
104 3aj4_A Pleckstrin homology dom 98.1 5.9E-06 2E-10 62.0 5.8 36 11-46 75-111 (112)
105 3cxb_B Pleckstrin homology dom 98.0 6.2E-06 2.1E-10 62.2 5.7 42 6-47 60-102 (112)
106 1btk_A Bruton'S tyrosine kinas 98.0 4.1E-06 1.4E-10 68.1 4.8 35 13-47 99-133 (169)
107 1pls_A Pleckstrin homology dom 98.0 1.1E-05 3.8E-10 60.5 6.7 44 6-49 60-104 (113)
108 2coc_A FYVE, rhogef and PH dom 98.0 1.2E-05 4E-10 60.8 6.8 38 9-46 69-106 (112)
109 1zc3_B Exocyst complex protein 98.0 8.3E-05 2.9E-09 56.1 11.5 91 211-302 9-106 (113)
110 1v5p_A Pleckstrin homology dom 98.0 5.6E-06 1.9E-10 63.9 5.1 39 8-46 82-120 (126)
111 1wi1_A Calcium-dependent activ 98.0 9.8E-06 3.3E-10 62.1 6.2 38 9-46 73-110 (126)
112 2dhk_A TBC1 domain family memb 98.0 7.4E-06 2.5E-10 62.3 5.3 42 9-50 67-108 (119)
113 1btn_A Beta-spectrin; signal t 98.0 6.4E-06 2.2E-10 61.0 4.7 38 7-44 68-106 (106)
114 1v5u_A SBF1, SET binding facto 98.0 5.6E-06 1.9E-10 62.5 4.1 39 8-46 73-111 (117)
115 3pp2_A RHO GTPase-activating p 97.9 9.4E-06 3.2E-10 62.4 5.0 40 7-46 83-123 (124)
116 1x1f_A Signal-transducing adap 97.9 1.2E-05 4E-10 64.0 5.7 37 10-46 77-113 (149)
117 1v61_A RAC/CDC42 guanine nucle 97.9 8.1E-06 2.8E-10 63.2 4.6 47 1-47 79-127 (132)
118 1dro_A Beta-spectrin; cytoskel 97.9 1.1E-05 3.8E-10 61.6 5.2 39 8-46 80-119 (122)
119 1wgq_A FYVE, rhogef and PH dom 97.9 2.3E-05 7.9E-10 58.4 6.6 39 8-46 64-103 (109)
120 1eaz_A Tandem PH domain contai 97.9 1.2E-05 4.2E-10 61.3 5.2 40 10-49 75-114 (125)
121 2dtc_A RAL guanine nucleotide 97.9 1.8E-05 6.3E-10 60.8 6.0 46 2-47 66-113 (126)
122 1fgy_A GRP1; PH domain, signal 97.9 1.9E-05 6.7E-10 60.3 6.1 45 3-47 55-121 (127)
123 3rcp_A Pleckstrin homology dom 97.9 1E-05 3.5E-10 59.7 4.2 37 11-47 57-94 (103)
124 1v89_A Hypothetical protein KI 97.9 2.2E-05 7.4E-10 59.1 6.0 39 9-47 67-113 (118)
125 2cod_A Centaurin-delta 1; ARF 97.9 1.8E-05 6.2E-10 59.6 5.3 37 12-48 65-101 (115)
126 2j59_M RHO-GTPase activating p 97.8 1.6E-05 5.6E-10 64.2 4.9 40 7-46 72-111 (168)
127 1unq_A RAC-alpha serine/threon 97.8 3.3E-05 1.1E-09 59.0 6.3 42 9-50 69-114 (125)
128 2i5f_A Pleckstrin; PH domain, 97.8 3E-05 1E-09 57.5 5.5 35 11-45 73-108 (109)
129 2yry_A Pleckstrin homology dom 97.8 3.6E-05 1.2E-09 58.4 5.9 40 7-46 80-120 (122)
130 2d9y_A Pleckstrin homology dom 97.8 2.6E-05 9E-10 58.7 4.9 40 7-46 69-109 (117)
131 2dkp_A Pleckstrin homology dom 97.8 2.5E-05 8.6E-10 59.8 4.7 37 10-46 82-119 (128)
132 2y7b_A Actin-binding protein a 97.7 6.6E-05 2.3E-09 58.0 7.1 40 10-49 72-131 (134)
133 2w2x_D 1-phosphatidylinositol- 97.7 4E-05 1.4E-09 58.8 5.5 39 9-47 79-120 (124)
134 3a8p_A T-lymphoma invasion and 97.7 5.7E-05 2E-09 65.7 6.5 46 6-51 83-129 (263)
135 3qwm_A Iqsec1, IQ motif and SE 97.7 0.00046 1.6E-08 53.6 10.9 78 224-302 34-121 (140)
136 1u5f_A SRC-associated adaptor 97.7 2.6E-05 8.9E-10 61.6 4.0 43 8-50 80-123 (148)
137 1upq_A PEPP1; PH domain, phosp 97.7 4.6E-05 1.6E-09 57.9 5.2 39 9-47 71-110 (123)
138 1x05_A Pleckstrin; PH domain, 97.6 5.1E-05 1.7E-09 58.2 5.0 37 11-47 84-121 (129)
139 1qqg_A IRS-1, insulin receptor 97.6 5.4E-05 1.9E-09 65.9 5.4 42 7-48 73-114 (264)
140 1v88_A Oxysterol binding prote 97.6 5.3E-05 1.8E-09 58.7 4.7 38 10-47 64-125 (130)
141 1x1g_A Pleckstrin 2; PH domain 97.6 2.8E-05 9.5E-10 59.7 3.0 36 11-46 88-124 (129)
142 2d9w_A Docking protein 2; PH d 97.5 0.00012 4.2E-09 55.4 5.4 35 10-45 86-120 (127)
143 2rov_A RHO-associated protein 97.4 0.00016 5.6E-09 54.8 5.3 38 9-46 72-115 (117)
144 4a6h_A Phosphatidylinositol 4, 97.4 0.00028 9.4E-09 53.8 5.8 35 11-45 76-117 (120)
145 1dbh_A Protein (human SOS 1); 97.4 0.0013 4.6E-08 59.4 11.4 92 210-303 247-349 (354)
146 2lg1_A A-kinase anchor protein 97.4 0.00075 2.6E-08 55.4 8.8 92 209-303 70-172 (185)
147 3mpx_A FYVE, rhogef and PH dom 97.3 0.00077 2.6E-08 62.7 9.6 91 211-303 245-337 (434)
148 1mai_A Phospholipase C delta-1 97.3 0.0042 1.4E-07 47.9 11.9 78 225-302 29-120 (131)
149 2vrw_B P95VAV, VAV1, proto-onc 97.1 0.0038 1.3E-07 57.5 11.6 94 210-303 234-335 (406)
150 3t06_A PDZ-rhogef, RHO guanine 97.1 0.0058 2E-07 56.5 12.6 91 210-303 295-408 (418)
151 3zvr_A Dynamin-1; hydrolase, D 97.1 0.0044 1.5E-07 61.5 12.2 93 210-302 540-644 (772)
152 1zbd_B Rabphilin-3A; G protein 97.1 0.00082 2.8E-08 52.0 5.5 102 26-140 7-109 (134)
153 2r09_A Cytohesin-3; autoinhibi 97.1 0.00058 2E-08 61.8 5.4 45 3-47 263-329 (347)
154 1dyn_A Dynamin; signal transdu 97.1 0.00068 2.3E-08 51.4 4.9 35 10-44 73-115 (125)
155 2pz1_A RHO guanine nucleotide 97.0 0.0083 2.9E-07 56.2 13.3 93 210-302 334-439 (466)
156 2dfk_A Collybistin II; DH doma 96.9 0.0072 2.5E-07 55.6 11.5 93 210-302 257-362 (402)
157 1xcg_A PDZ-rhogef, RHO guanine 96.9 0.012 4.1E-07 53.3 12.7 91 210-303 253-366 (368)
158 3odw_A RHO guanine nucleotide 96.7 0.011 3.6E-07 56.7 11.6 92 210-304 412-525 (536)
159 3p6a_A RHO guanine nucleotide 96.7 0.016 5.4E-07 52.6 11.8 91 210-303 259-371 (377)
160 3ky9_A Proto-oncogene VAV; cal 96.6 0.012 4.2E-07 56.8 11.3 93 210-302 406-506 (587)
161 1txd_A RHO guanine nucleotide 96.6 0.015 5.2E-07 53.0 11.3 92 210-303 257-369 (385)
162 2z0q_A XPLN, RHO guanine nucle 96.5 0.012 4.1E-07 52.8 9.8 89 211-302 233-345 (346)
163 2pz1_A RHO guanine nucleotide 96.5 0.0041 1.4E-07 58.4 6.9 41 10-50 402-444 (466)
164 3jzy_A Intersectin 2; C2 domai 96.5 0.00045 1.5E-08 65.6 0.0 48 2-49 317-365 (510)
165 1kz7_A Guanine nucleotide exch 96.5 0.0044 1.5E-07 56.0 6.6 40 11-50 288-329 (353)
166 2zet_C Melanophilin; complex, 96.5 0.0017 5.8E-08 51.4 3.3 51 84-140 68-119 (153)
167 2dfk_A Collybistin II; DH doma 96.5 0.0037 1.3E-07 57.6 6.1 41 10-50 325-367 (402)
168 3a8n_A TIAM-1, T-lymphoma inva 96.3 0.0029 9.9E-08 55.2 4.4 44 5-48 82-126 (279)
169 3ksy_A SOS-1, SON of sevenless 96.2 0.015 5.3E-07 60.0 9.6 91 210-302 444-545 (1049)
170 1w1g_A HPDK1, 3-phosphoinositi 96.0 0.007 2.4E-07 47.5 4.7 37 12-49 106-142 (151)
171 2rgn_B RHOA/RAC/CDC42 exchange 96.0 0.011 3.9E-07 53.3 6.7 41 10-50 277-322 (354)
172 1txd_A RHO guanine nucleotide 96.0 0.011 3.9E-07 53.8 6.6 40 12-51 332-374 (385)
173 1nty_A Triple functional domai 95.9 0.06 2.1E-06 47.5 11.0 80 222-303 219-308 (311)
174 1v5m_A SH2 and PH domain-conta 95.8 0.007 2.4E-07 46.0 3.5 37 11-47 94-131 (136)
175 3jzy_A Intersectin 2; C2 domai 95.7 0.0017 5.9E-08 61.5 0.0 91 210-303 253-362 (510)
176 2rgn_B RHOA/RAC/CDC42 exchange 95.6 0.071 2.4E-06 48.0 10.4 79 222-302 226-317 (354)
177 3tca_A Amyloid beta A4 precurs 95.6 0.011 3.8E-07 51.5 4.8 36 10-45 234-275 (291)
178 1kz7_A Guanine nucleotide exch 95.6 0.071 2.4E-06 48.0 10.2 78 223-302 236-324 (353)
179 3v5w_A G-protein coupled recep 95.4 0.23 7.7E-06 48.7 13.7 92 208-302 557-651 (689)
180 2ys3_A UNC-112-related protein 95.4 0.027 9.1E-07 43.4 5.7 38 9-46 71-112 (137)
181 1foe_A T-lymphoma invasion and 94.6 0.23 7.7E-06 44.9 10.5 55 248-302 303-365 (377)
182 2owa_A Arfgap-like finger doma 94.3 0.0063 2.1E-07 47.1 -0.4 38 83-124 35-72 (138)
183 2olm_A Nucleoporin-like protei 94.3 0.0053 1.8E-07 47.8 -0.9 36 84-123 25-60 (140)
184 2iqj_A Stromal membrane-associ 94.2 0.0055 1.9E-07 47.3 -0.9 36 84-123 27-62 (134)
185 1z87_A Alpha-1-syntrophin; pro 94.2 0.2 6.7E-06 43.2 8.7 56 248-303 205-262 (263)
186 2crw_A ARF GAP 3, ADP-ribosyla 93.9 0.0077 2.6E-07 47.2 -0.7 38 83-124 28-65 (149)
187 3sub_A ADP-ribosylation factor 93.8 0.0093 3.2E-07 47.2 -0.5 38 83-124 21-58 (163)
188 2crr_A Stromal membrane-associ 93.7 0.0073 2.5E-07 47.0 -1.2 37 83-123 28-64 (141)
189 3ksy_A SOS-1, SON of sevenless 93.5 0.065 2.2E-06 55.3 5.1 41 7-47 506-547 (1049)
190 2csz_A Synaptotagmin-like prot 93.1 0.047 1.6E-06 37.4 2.2 50 82-138 23-73 (76)
191 3dwd_A ADP-ribosylation factor 92.9 0.015 5E-07 45.3 -0.6 38 83-124 37-74 (147)
192 2p57_A GTPase-activating prote 92.9 0.013 4.3E-07 45.6 -1.0 36 84-123 37-72 (144)
193 2d9z_A Protein kinase C, NU ty 92.7 0.23 7.7E-06 37.6 5.7 37 11-47 73-124 (129)
194 2adz_A Alpha-1-syntrophin; pro 91.8 0.67 2.3E-05 37.2 7.8 56 248-303 120-177 (178)
195 1mai_A Phospholipase C delta-1 90.5 0.26 8.8E-06 37.6 4.1 38 11-48 84-123 (131)
196 3hk0_A Growth factor receptor- 90.0 0.32 1.1E-05 41.6 4.7 36 12-47 200-241 (256)
197 2b0o_E UPLC1; arfgap, structur 89.8 0.051 1.7E-06 47.7 -0.6 38 83-124 41-78 (301)
198 3o47_A ADP-ribosylation factor 89.4 0.055 1.9E-06 48.2 -0.6 38 83-124 36-73 (329)
199 1wff_A Riken cDNA 2810002D23 p 89.1 0.46 1.6E-05 33.2 4.1 30 82-113 23-52 (85)
200 2coa_A Protein kinase C, D2 ty 88.7 0.25 8.4E-06 37.3 2.6 37 10-46 72-119 (125)
201 1wfh_A Zinc finger (AN1-like) 88.7 0.29 9.9E-06 32.2 2.6 27 84-113 15-41 (64)
202 1wfl_A Zinc finger protein 216 88.5 0.56 1.9E-05 31.8 4.0 27 84-113 25-51 (74)
203 1wfp_A Zinc finger (AN1-like) 87.4 0.78 2.7E-05 31.0 4.2 30 81-113 22-51 (74)
204 3jue_A Arfgap with coiled-coil 87.0 0.1 3.4E-06 47.4 -0.6 38 83-124 44-81 (368)
205 4gmv_A RAS-associated and plec 86.4 0.64 2.2E-05 40.3 4.3 37 11-47 225-267 (281)
206 1fho_A UNC-89; pleckstrin homo 86.3 4.1 0.00014 30.3 8.2 91 209-300 9-109 (119)
207 4ejn_A RAC-alpha serine/threon 84.7 0.74 2.5E-05 42.3 4.1 39 10-48 68-110 (446)
208 1wg2_A Zinc finger (AN1-like) 84.3 0.68 2.3E-05 30.5 2.6 27 84-113 15-41 (64)
209 3lvq_E ARF-GAP with SH3 domain 84.1 0.17 5.7E-06 47.6 -0.6 36 84-123 23-58 (497)
210 2a20_A Regulating synaptic mem 83.7 1.1 3.9E-05 28.7 3.3 53 82-138 7-60 (62)
211 3a98_B Engulfment and cell mot 82.9 13 0.00046 30.3 10.6 32 269-300 116-147 (203)
212 1fho_A UNC-89; pleckstrin homo 82.5 0.11 3.6E-06 39.2 -2.1 37 12-48 73-114 (119)
213 1dcq_A PYK2-associated protein 82.4 0.21 7.2E-06 43.1 -0.6 37 84-124 17-53 (278)
214 1x4w_A Hypothetical protein FL 78.0 0.99 3.4E-05 30.0 1.7 31 82-113 13-44 (67)
215 2ecm_A Ring finger and CHY zin 76.9 1.4 4.8E-05 27.3 2.2 36 83-118 4-39 (55)
216 1z60_A TFIIH basal transcripti 76.6 0.4 1.4E-05 31.1 -0.5 32 85-117 16-47 (59)
217 3ulb_A Target of rapamycin com 75.6 11 0.00036 28.1 6.9 41 9-49 71-117 (121)
218 1twf_L ABC10-alpha, DNA-direct 75.2 1.3 4.4E-05 29.8 1.7 29 84-112 28-58 (70)
219 2e72_A POGO transposable eleme 73.3 0.85 2.9E-05 27.9 0.4 30 81-110 9-40 (49)
220 1iym_A EL5; ring-H2 finger, ub 73.2 2.1 7.3E-05 26.5 2.4 35 84-118 5-39 (55)
221 4ayb_P DNA-directed RNA polyme 73.1 1.7 5.7E-05 26.5 1.6 24 86-109 5-32 (48)
222 2egp_A Tripartite motif-contai 72.8 1.2 4.2E-05 30.0 1.2 51 84-138 12-62 (79)
223 2ecv_A Tripartite motif-contai 66.8 5.1 0.00017 27.0 3.4 50 84-138 19-68 (85)
224 3j21_g 50S ribosomal protein L 66.7 2.3 7.8E-05 26.6 1.3 24 84-109 14-37 (51)
225 1weo_A Cellulose synthase, cat 66.3 3.6 0.00012 28.8 2.4 40 79-118 11-53 (93)
226 3qr0_A Phospholipase C-beta (P 66.0 54 0.0018 32.7 11.7 75 225-301 39-140 (816)
227 2zkm_X 1-phosphatidylinositol- 62.4 41 0.0014 33.5 10.2 77 221-300 28-132 (799)
228 1bor_A Transcription factor PM 62.1 5.4 0.00019 24.9 2.6 31 83-117 5-35 (56)
229 2ct2_A Tripartite motif protei 61.7 3 0.0001 28.6 1.4 51 84-138 15-65 (88)
230 3j20_Y 30S ribosomal protein S 60.7 3.7 0.00013 25.5 1.5 27 84-110 19-47 (50)
231 2ct7_A Ring finger protein 31; 60.1 4.6 0.00016 28.1 2.1 32 85-116 26-59 (86)
232 2ecn_A Ring finger protein 141 58.7 2.2 7.5E-05 28.0 0.2 46 84-141 15-60 (70)
233 3lrq_A E3 ubiquitin-protein li 57.2 3.2 0.00011 29.6 0.9 46 85-139 23-68 (100)
234 2ysj_A Tripartite motif-contai 56.1 8 0.00027 24.5 2.6 33 83-119 19-51 (63)
235 3h0g_L DNA-directed RNA polyme 54.9 7.3 0.00025 25.4 2.2 26 84-109 21-47 (63)
236 2jrp_A Putative cytoplasmic pr 54.5 6.9 0.00024 26.9 2.1 24 86-109 4-27 (81)
237 2ysl_A Tripartite motif-contai 54.3 8.1 0.00028 25.3 2.5 46 83-136 19-64 (73)
238 3cc2_Z 50S ribosomal protein L 54.2 4.4 0.00015 29.9 1.2 33 82-114 58-92 (116)
239 3jyw_9 60S ribosomal protein L 54.0 6.1 0.00021 26.5 1.8 29 84-113 26-57 (72)
240 3ohm_B 1-phosphatidylinositol- 52.2 67 0.0023 32.3 9.7 33 268-300 100-136 (885)
241 3l11_A E3 ubiquitin-protein li 52.1 5.1 0.00018 29.2 1.3 47 84-140 15-61 (115)
242 3iz5_m 60S ribosomal protein L 51.9 6.2 0.00021 27.9 1.6 30 84-114 36-68 (92)
243 3ng2_A RNF4, snurf, ring finge 51.9 3.9 0.00013 26.7 0.6 37 83-119 9-48 (71)
244 3j21_i 50S ribosomal protein L 51.9 5.5 0.00019 27.6 1.3 29 84-113 35-66 (83)
245 2d8t_A Dactylidin, ring finger 51.5 5.1 0.00017 26.3 1.1 44 83-137 14-57 (71)
246 3fl2_A E3 ubiquitin-protein li 51.2 2.4 8.3E-05 31.5 -0.7 46 85-140 53-98 (124)
247 1vq8_Z 50S ribosomal protein L 50.0 6 0.00021 27.4 1.3 30 85-114 28-59 (83)
248 1x4j_A Ring finger protein 38; 49.2 6.2 0.00021 26.2 1.3 37 82-119 21-57 (75)
249 2ea6_A Ring finger protein 4; 48.7 4.6 0.00016 26.1 0.5 37 82-118 13-52 (69)
250 2ect_A Ring finger protein 126 47.9 12 0.00042 24.8 2.6 49 83-139 14-62 (78)
251 2rrf_A Zinc finger FYVE domain 47.4 16 0.00055 27.6 3.3 39 266-304 80-128 (141)
252 2ecl_A Ring-box protein 2; RNF 47.1 8.2 0.00028 26.2 1.6 54 75-135 6-70 (81)
253 2lcq_A Putative toxin VAPC6; P 46.9 6.5 0.00022 30.8 1.2 24 85-108 133-156 (165)
254 1jm7_B BARD1, BRCA1-associated 46.3 7.9 0.00027 28.3 1.6 44 84-139 22-65 (117)
255 2ep4_A Ring finger protein 24; 46.3 9.4 0.00032 25.1 1.8 47 83-137 14-60 (74)
256 4b6d_A RAC GTPase-activating p 46.3 7.6 0.00026 25.1 1.3 33 84-116 19-51 (61)
257 3hie_A Protein PSL1, exocyst c 45.8 88 0.003 24.6 7.6 73 225-301 65-146 (171)
258 4gzn_C ZFP-57, zinc finger pro 45.0 8.5 0.00029 24.5 1.4 11 86-96 6-16 (60)
259 1ffk_W Ribosomal protein L37AE 44.3 8.5 0.00029 25.9 1.3 30 84-113 27-58 (73)
260 2ckl_B Ubiquitin ligase protei 44.3 6.1 0.00021 30.8 0.7 47 84-139 54-100 (165)
261 2kdx_A HYPA, hydrogenase/ureas 44.0 8.3 0.00028 28.5 1.3 14 86-99 75-88 (119)
262 4a17_Y RPL37A, 60S ribosomal p 43.4 7.5 0.00026 28.0 0.9 31 84-115 36-69 (103)
263 2jne_A Hypothetical protein YF 43.0 11 0.00038 26.8 1.7 26 84-109 32-57 (101)
264 2xeu_A Ring finger protein 4; 42.7 6.4 0.00022 24.9 0.5 35 84-118 3-40 (64)
265 2ecw_A Tripartite motif-contai 42.6 14 0.00048 24.7 2.3 49 84-137 19-67 (85)
266 2yur_A Retinoblastoma-binding 42.4 11 0.00037 24.9 1.6 45 84-136 15-59 (74)
267 2ct0_A Non-SMC element 1 homol 42.1 8.2 0.00028 26.0 0.9 49 82-138 13-61 (74)
268 3ml4_A Protein DOK-7; tyrosine 42.1 30 0.001 28.6 4.4 37 9-45 76-112 (224)
269 1chc_A Equine herpes virus-1 r 42.0 13 0.00043 23.9 1.9 43 84-136 5-47 (68)
270 1jm7_A BRCA1, breast cancer ty 41.9 8.2 0.00028 27.7 1.0 47 86-140 23-69 (112)
271 2kiz_A E3 ubiquitin-protein li 41.6 10 0.00036 24.4 1.4 36 83-119 13-48 (69)
272 2csy_A Zinc finger protein 183 41.0 10 0.00035 25.5 1.3 44 84-138 15-58 (81)
273 1wd2_A Ariadne-1 protein homol 40.9 21 0.00071 22.9 2.7 35 84-118 6-44 (60)
274 2ecj_A Tripartite motif-contai 40.8 9.6 0.00033 23.5 1.1 31 84-118 15-45 (58)
275 4hc9_A Trans-acting T-cell-spe 40.7 14 0.00049 27.2 2.2 34 109-142 60-93 (115)
276 1qxf_A GR2, 30S ribosomal prot 40.6 13 0.00043 24.5 1.6 27 86-112 9-38 (66)
277 1e4u_A Transcriptional repress 40.6 11 0.00037 25.6 1.4 48 84-137 11-58 (78)
278 2djb_A Polycomb group ring fin 40.5 13 0.00044 24.3 1.7 46 84-139 15-60 (72)
279 1g25_A CDK-activating kinase a 39.8 6.9 0.00024 25.1 0.3 34 85-118 4-38 (65)
280 2ecy_A TNF receptor-associated 39.6 6.8 0.00023 25.2 0.2 32 84-119 15-46 (66)
281 1pft_A TFIIB, PFTFIIBN; N-term 39.3 15 0.00051 22.4 1.8 8 85-92 6-13 (50)
282 2l0b_A E3 ubiquitin-protein li 38.6 7.8 0.00027 26.9 0.4 36 83-119 39-74 (91)
283 3j20_W 30S ribosomal protein S 38.1 15 0.0005 23.9 1.6 27 86-112 17-46 (63)
284 3c5k_A HD6, histone deacetylas 37.9 14 0.00049 26.9 1.7 31 84-118 24-54 (109)
285 2y43_A E3 ubiquitin-protein li 37.9 9.8 0.00033 26.7 0.9 46 84-139 22-67 (99)
286 3v2d_5 50S ribosomal protein L 36.5 13 0.00044 24.0 1.1 20 84-107 30-50 (60)
287 3a58_A Exocyst complex compone 36.3 1.3E+02 0.0045 25.9 7.7 74 224-301 134-216 (320)
288 3izc_m 60S ribosomal protein R 35.9 16 0.00056 25.7 1.7 30 84-114 36-68 (92)
289 4a0k_B E3 ubiquitin-protein li 35.5 11 0.00036 28.0 0.7 56 76-138 40-109 (117)
290 1t1h_A Gspef-atpub14, armadill 35.3 9.8 0.00034 25.3 0.5 46 84-139 8-53 (78)
291 2lv2_A Insulinoma-associated p 35.3 25 0.00087 24.0 2.7 13 84-96 28-40 (85)
292 2k4x_A 30S ribosomal protein S 34.5 15 0.00052 23.2 1.2 26 84-109 18-45 (55)
293 2xzm_6 RPS27E; ribosome, trans 33.7 18 0.00063 24.7 1.6 27 86-112 34-63 (81)
294 3a43_A HYPD, hydrogenase nicke 33.7 14 0.00049 28.1 1.2 13 86-98 72-84 (139)
295 3iz6_X 40S ribosomal protein S 33.7 16 0.00056 25.3 1.4 27 86-112 38-67 (86)
296 1x4l_A Skeletal muscle LIM-pro 33.6 28 0.00095 22.6 2.6 55 84-141 5-68 (72)
297 1x4v_A Hypothetical protein LO 33.2 22 0.00075 23.1 1.9 26 84-112 12-39 (63)
298 4ayc_A E3 ubiquitin-protein li 32.9 12 0.00041 28.2 0.7 43 86-139 55-97 (138)
299 2ckl_A Polycomb group ring fin 32.6 12 0.00042 26.7 0.7 47 84-140 15-61 (108)
300 1vq8_1 50S ribosomal protein L 32.0 17 0.00057 23.1 1.1 8 102-109 19-26 (57)
301 3u5c_b RP61, YS20, 40S ribosom 31.6 19 0.00066 24.6 1.5 27 86-112 36-65 (82)
302 3uk3_C Zinc finger protein 217 31.6 23 0.00078 21.1 1.8 11 86-96 6-16 (57)
303 4bbk_A Kindlin-1, fermitin fam 31.3 1E+02 0.0035 24.0 5.7 35 12-46 91-129 (165)
304 1z6u_A NP95-like ring finger p 31.3 14 0.00047 28.5 0.8 46 85-140 79-124 (150)
305 2lce_A B-cell lymphoma 6 prote 30.6 29 0.001 22.1 2.3 13 84-96 17-29 (74)
306 1dl6_A Transcription factor II 30.5 27 0.00094 22.1 2.0 8 85-92 12-19 (58)
307 1v87_A Deltex protein 2; ring- 30.5 15 0.0005 26.5 0.8 52 85-138 26-91 (114)
308 2enz_A NPKC-theta, protein kin 30.1 34 0.0012 22.0 2.5 35 83-117 22-57 (65)
309 2fnf_X Putative RAS effector N 29.9 27 0.00094 23.2 2.0 33 83-117 34-66 (72)
310 1bbo_A Human enhancer-binding 29.8 25 0.00087 20.9 1.8 10 86-95 3-12 (57)
311 2fc7_A ZZZ3 protein; structure 29.5 23 0.00079 24.3 1.6 33 84-117 21-57 (82)
312 3a98_B Engulfment and cell mot 28.0 93 0.0032 25.2 5.3 33 12-44 115-148 (203)
313 3d00_A Tungsten formylmethanof 28.0 38 0.0013 27.3 2.9 25 84-117 163-187 (191)
314 2enn_A NPKC-theta, protein kin 27.7 30 0.001 23.2 1.9 36 82-117 32-68 (77)
315 2yuu_A NPKC-delta, protein kin 27.6 33 0.0011 23.4 2.1 35 83-117 27-62 (83)
316 1gh9_A 8.3 kDa protein (gene M 27.5 19 0.00066 24.0 0.9 23 86-110 6-30 (71)
317 1e7l_A GP49, recombination end 27.2 18 0.0006 28.2 0.7 23 84-106 20-45 (157)
318 2gmg_A Hypothetical protein PF 27.2 28 0.00097 25.1 1.8 9 86-94 69-77 (105)
319 1gnf_A Transcription factor GA 27.1 25 0.00086 21.3 1.3 13 84-96 4-16 (46)
320 1tot_A CREB-binding protein; z 26.7 16 0.00053 22.8 0.3 20 85-107 7-26 (52)
321 2adr_A ADR1; transcription reg 26.7 30 0.001 20.9 1.7 10 86-95 4-13 (60)
322 3v5w_A G-protein coupled recep 26.6 99 0.0034 30.1 6.1 37 13-49 618-655 (689)
323 2vje_A E3 ubiquitin-protein li 26.5 14 0.00048 23.8 0.0 36 80-117 4-40 (64)
324 3ztg_A E3 ubiquitin-protein li 26.5 24 0.00082 24.1 1.3 47 84-138 13-59 (92)
325 1k81_A EIF-2-beta, probable tr 26.1 21 0.00073 20.3 0.8 24 86-109 2-30 (36)
326 2g45_A Ubiquitin carboxyl-term 26.1 34 0.0011 25.7 2.1 28 84-115 34-61 (129)
327 1vd4_A Transcription initiatio 26.0 17 0.00059 22.7 0.4 10 86-95 16-25 (62)
328 3gox_A Restriction endonucleas 25.8 18 0.0006 29.2 0.5 25 85-109 138-166 (200)
329 2i50_A Ubiquitin carboxyl-term 25.6 21 0.00071 26.7 0.8 31 85-115 29-69 (126)
330 3j21_e 50S ribosomal protein L 25.5 25 0.00085 22.7 1.1 8 102-109 19-26 (62)
331 4f7h_A Fermitin family homolog 25.3 1.5E+02 0.005 23.3 5.7 35 13-47 113-151 (173)
332 2d8v_A Zinc finger FYVE domain 25.3 37 0.0013 22.2 1.9 28 83-115 7-35 (67)
333 3dpl_R Ring-box protein 1; ubi 25.2 24 0.00083 25.4 1.1 43 76-118 29-85 (106)
334 1wys_A Riken cDNA 2310008M20 p 25.1 38 0.0013 22.8 2.0 28 84-114 14-43 (75)
335 2kwq_A Protein MCM10 homolog; 24.9 26 0.00088 24.7 1.2 23 86-109 50-74 (92)
336 4ap4_A E3 ubiquitin ligase RNF 24.8 19 0.00063 26.4 0.5 37 82-118 70-109 (133)
337 3t6p_A Baculoviral IAP repeat- 24.8 35 0.0012 30.2 2.3 39 84-137 295-334 (345)
338 2eli_A Protein kinase C alpha 24.8 48 0.0017 22.6 2.6 36 82-117 26-62 (85)
339 3hct_A TNF receptor-associated 24.7 21 0.00072 25.9 0.7 46 84-139 18-63 (118)
340 1we9_A PHD finger family prote 24.5 66 0.0022 20.4 3.1 55 81-137 3-57 (64)
341 2ayj_A 50S ribosomal protein L 24.3 26 0.00089 22.2 1.0 22 84-107 19-40 (56)
342 3k1f_M Transcription initiatio 24.0 31 0.0011 27.4 1.6 36 75-110 11-52 (197)
343 2db6_A SH3 and cysteine rich d 23.8 24 0.00083 23.5 0.8 35 83-117 27-62 (74)
344 3ro3_B Minsc, peptide of prote 23.7 58 0.002 16.0 1.9 14 288-301 7-20 (22)
345 2kae_A GATA-type transcription 23.6 26 0.00089 23.4 0.9 13 83-95 7-19 (71)
346 1ptq_A Protein kinase C delta 23.5 26 0.00088 21.0 0.9 34 84-117 11-45 (50)
347 2gqj_A Zinc finger protein KIA 23.5 21 0.00072 24.6 0.5 11 85-95 25-35 (98)
348 1wil_A KIAA1045 protein; ring 23.4 23 0.0008 24.4 0.7 32 85-118 16-47 (89)
349 2fqm_A Phosphoprotein, P prote 23.2 1.6E+02 0.0056 19.2 4.9 34 15-48 11-47 (75)
350 3f6q_B LIM and senescent cell 23.2 43 0.0015 21.3 2.1 54 84-140 11-71 (72)
351 1rmd_A RAG1; V(D)J recombinati 23.1 24 0.00082 25.4 0.8 46 84-139 23-68 (116)
352 4ic3_A E3 ubiquitin-protein li 23.1 23 0.00079 23.3 0.6 29 85-117 25-54 (74)
353 2zjr_Z 50S ribosomal protein L 22.5 33 0.0011 22.0 1.2 21 84-107 30-50 (60)
354 1faq_A RAF-1; transferase, ser 22.4 42 0.0015 20.2 1.8 31 84-117 14-44 (52)
355 1x5w_A Zinc finger protein 64, 22.3 35 0.0012 21.5 1.4 12 85-96 10-21 (70)
356 1x6e_A Zinc finger protein 24; 22.2 35 0.0012 21.7 1.4 12 85-96 15-26 (72)
357 3jrn_A AT1G72930 protein; TIR 22.0 58 0.002 25.8 2.9 20 286-305 128-147 (176)
358 3k7a_M Transcription initiatio 21.3 43 0.0015 29.5 2.2 34 78-111 14-53 (345)
359 2eps_A POZ-, at HOOK-, and zin 21.1 38 0.0013 20.2 1.3 10 86-95 14-23 (54)
360 2jsp_A Transcriptional regulat 20.9 21 0.00071 24.9 0.0 18 84-102 21-38 (87)
361 1wee_A PHD finger family prote 20.5 1.2E+02 0.0041 19.8 3.8 53 81-137 13-65 (72)
362 2epr_A POZ-, at HOOK-, and zin 20.5 31 0.0011 19.8 0.8 12 85-96 13-24 (48)
363 2uzg_A Ubiquitin carboxyl-term 20.4 47 0.0016 23.5 1.8 27 84-113 25-53 (97)
364 1wim_A KIAA0161 protein; ring 20.2 37 0.0013 23.4 1.3 36 84-120 5-40 (94)
365 3hie_A Protein PSL1, exocyst c 20.1 1.1E+02 0.0038 24.0 4.1 38 11-49 114-151 (171)
366 2jmo_A Parkin; IBR, E3 ligase, 20.1 74 0.0025 21.4 2.7 33 84-116 25-66 (80)
No 1
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=99.94 E-value=9.1e-28 Score=226.36 Aligned_cols=139 Identities=35% Similarity=0.637 Sum_probs=39.1
Q ss_pred CeeecCCCcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHHhc--ccccccccccccCCCcccCcCCCCCee
Q psy2207 1 MKVCLPQTEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENEQH--LLSFLNRRSLTQSSIPELNLGKVAPLW 78 (305)
Q Consensus 1 m~v~~~~~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~w 78 (305)
|.|..+++++.+|.|.|.++.++|.|+|.|++||++|+++|+++|.+.... ..+|... .+.++......+..+|.|
T Consensus 292 l~v~~~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~~~~~~~~~f~~~--~e~~~~~~~~~~~~~p~w 369 (434)
T 3mpx_A 292 MKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYKAQALAAFHHS--VEIRERLGVSLGERPPTL 369 (434)
T ss_dssp ---CCCCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC------------------------------------
T ss_pred cEEEecCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHHHhhhcccccCCc--cchhhcccCccccCCCcC
Confidence 456677778899999999999999999999999999999999999875332 2233221 122233455677889999
Q ss_pred eecCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHh
Q psy2207 79 IPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQ 141 (305)
Q Consensus 79 ~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~ 141 (305)
+||..+..|+.|+.+|+++.|+||||+||.+||..||++++++++.+.+++|||+.||..+..
T Consensus 370 ~~~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l~~ 432 (434)
T 3mpx_A 370 VPVTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELKK 432 (434)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCcccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998888999999999998754
No 2
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=1.5e-22 Score=154.83 Aligned_cols=97 Identities=22% Similarity=0.363 Sum_probs=83.6
Q ss_pred CCCCCceeeeeeecc-CCCceEEEEEEEC---CEEEEEccCccCccceEEEecCeEEEEc--cccCCcceeEEEEeCCce
Q psy2207 206 NDSGSQHSGWLHKKS-GRNWKRYWFVLKD---QVMYKYKASEDIKALLSIPVLGYELEAL--NEQDNFKYVFQLKHQGQD 279 (305)
Q Consensus 206 ~~~~~~~~G~L~~~~-~~~wkrrw~vL~~---~~L~~y~~~~d~~p~~~i~L~~~~v~~~--~~~~~~~~~F~l~~~~~~ 279 (305)
..++++++|||++++ .+.|++|||||++ .+||||++++|..|.+.|+|.|+.|... .+...++|+|+|.+++ +
T Consensus 4 ~~~~~~~~G~L~k~~~~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~-~ 82 (112)
T 2coc_A 4 GSSGSLLCGPLRLSESGETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAK-Q 82 (112)
T ss_dssp CCSSSSSEEEEEEESSSSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETT-E
T ss_pred ccCCceEEEEEEecCCCCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCcccccCCCCEEEEecCC-e
Confidence 345668999999987 7899999999997 4899999999999999999999999852 2233467999999654 6
Q ss_pred eEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 280 PLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 280 ~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+|+|+|+|++++++||++|+.|+.
T Consensus 83 ~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 83 SWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHS
T ss_pred EEEEEcCCHHHHHHHHHHHHHHhc
Confidence 799999999999999999999874
No 3
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.88 E-value=2.5e-22 Score=154.69 Aligned_cols=97 Identities=26% Similarity=0.480 Sum_probs=84.5
Q ss_pred CCCCceeeeeeecc---CCCceEEEEEEECCEEEEEc----cCccCccceEEEecCeEEEEc---cccCCcceeEEEEeC
Q psy2207 207 DSGSQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYK----ASEDIKALLSIPVLGYELEAL---NEQDNFKYVFQLKHQ 276 (305)
Q Consensus 207 ~~~~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~----~~~d~~p~~~i~L~~~~v~~~---~~~~~~~~~F~l~~~ 276 (305)
+++..++|||++++ .+.|+||||||++..||||+ .+.+..|+|.|+|.+++|... ++...++|.|+++++
T Consensus 5 p~n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~ 84 (126)
T 1wi1_A 5 SSGMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKE 84 (126)
T ss_dssp CCCEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECS
T ss_pred CCCCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCcccccCceEEEEecC
Confidence 44568999999997 57999999999999999999 888899999999999999843 223467799999977
Q ss_pred CceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 277 GQDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 277 ~~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
+. .|+|+|+|+++++.||.||..|+..
T Consensus 85 ~~-ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 85 GD-TVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp SC-EEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred Cc-eEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 65 5999999999999999999999864
No 4
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.87 E-value=4.1e-21 Score=146.36 Aligned_cols=98 Identities=42% Similarity=0.779 Sum_probs=88.1
Q ss_pred CCCCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEE
Q psy2207 206 NDSGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVF 283 (305)
Q Consensus 206 ~~~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f 283 (305)
.+++++++|||++++ .+.|++|||||+++.|+||+++.+..|.+.|+|.++.+....+...++++|+|.+++.++|+|
T Consensus 4 ~~~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~ 83 (109)
T 1wgq_A 4 GSSGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVF 83 (109)
T ss_dssp CCCSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEE
T ss_pred CCCCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEE
Confidence 345678999999998 689999999999999999999999999999999999998766555567999999888888999
Q ss_pred EcCCHHHHHHHHHHHHHHHc
Q psy2207 284 GADNEQSYERWMKAMREATT 303 (305)
Q Consensus 284 ~a~s~e~~~~Wi~al~~a~~ 303 (305)
+|+|+++++.||.+|+.|+.
T Consensus 84 ~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 84 KADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp ECSSHHHHHHHHHHHHHHHS
T ss_pred ECCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999874
No 5
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.86 E-value=2.6e-21 Score=152.15 Aligned_cols=96 Identities=24% Similarity=0.404 Sum_probs=83.3
Q ss_pred CCCceeeeeeecc-CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCc--------
Q psy2207 208 SGSQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ-------- 278 (305)
Q Consensus 208 ~~~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~-------- 278 (305)
..++++|||++++ .+.|++|||||+++.|+||+++.+..|.+.|+|.++.|...+ ....+|+|+|.++..
T Consensus 6 ~~v~k~GwL~K~g~~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~v~~~~-~~~~~~~F~i~~~~~~~i~~~~g 84 (130)
T 1v88_A 6 SGIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERP-SKKDGFCFKLFHPLEQSIWAVKG 84 (130)
T ss_dssp SSCCEEEEEEECCSSSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCCC-TTTSSCEEEEECTTCCCCSCSSC
T ss_pred CceEEEeEEEEeCCCCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCCEEEECC-CCCCCeEEEEEcCCccccccccC
Confidence 4468999999998 889999999999999999999999999999999999985433 234569999997543
Q ss_pred ---------------eeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 279 ---------------DPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 279 ---------------~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
++|+|+|+|++++++||+||+.|+..
T Consensus 85 ~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 85 PKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp TTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred CcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 34999999999999999999999875
No 6
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=99.84 E-value=1e-21 Score=142.07 Aligned_cols=71 Identities=39% Similarity=0.823 Sum_probs=66.0
Q ss_pred CCCCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCC-CccccccHhhHHHHHhc
Q psy2207 72 GKVAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKK-FRNFRVCEECYHYLVQE 142 (305)
Q Consensus 72 ~~~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~-~~~~rvC~~C~~~~~~~ 142 (305)
....|.|+||+++..|+.|..+|++++||||||+||.+||+.||.++++|+..+ .+++|||+.||..+...
T Consensus 9 ~~~~~~W~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~ 80 (84)
T 1z2q_A 9 KQSKGYWQEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSS 80 (84)
T ss_dssp TCCCSCCCCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTS
T ss_pred cCCCCccccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhc
Confidence 355789999999999999999999999999999999999999999999998776 79999999999998764
No 7
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.3e-21 Score=141.65 Aligned_cols=70 Identities=23% Similarity=0.541 Sum_probs=64.0
Q ss_pred CCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCC-------CccccccHhhHHHHHhcc
Q psy2207 74 VAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKK-------FRNFRVCEECYHYLVQEF 143 (305)
Q Consensus 74 ~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~-------~~~~rvC~~C~~~~~~~~ 143 (305)
..+.|+||+++..|+.|..+|++++||||||+||.|||+.|+.++++|+..+ .+++|||+.||..|....
T Consensus 4 ~~~~W~pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l~~~~ 80 (84)
T 1x4u_A 4 GSSGRYPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKSG 80 (84)
T ss_dssp CCCCSCSCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHHHSCC
T ss_pred CCCccccCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHHhccC
Confidence 4689999999999999999999999999999999999999999999998654 378999999999998653
No 8
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=99.84 E-value=1e-21 Score=143.66 Aligned_cols=74 Identities=46% Similarity=0.959 Sum_probs=68.3
Q ss_pred ccCcCCCCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHhc
Q psy2207 68 ELNLGKVAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQE 142 (305)
Q Consensus 68 ~~~~~~~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~~ 142 (305)
++.++..+|.|++|+++..|+.|..+|++++|+||||+||.+||+.|+.++++|++. .+++|||+.||..+...
T Consensus 4 ~~~l~~~~p~W~~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~-~~~~RVC~~C~~~l~~~ 77 (90)
T 3t7l_A 4 GLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYL-EKEARVCVVCYETISKA 77 (90)
T ss_dssp -CCTTTSCCCCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTT-TEEEEECHHHHHHHHHH
T ss_pred hcccCCCCCcCcccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCC-CCCCeECHHHHHHHHHH
Confidence 456788899999999999999999999999999999999999999999999999875 58999999999999865
No 9
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.83 E-value=5.1e-20 Score=142.56 Aligned_cols=96 Identities=20% Similarity=0.406 Sum_probs=80.9
Q ss_pred Cceeeeeeecc--CCCceEEEEEEECCEEEEEccCc---cCccceEEEecCeEEEEccccCC--------cceeEEEEeC
Q psy2207 210 SQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASE---DIKALLSIPVLGYELEALNEQDN--------FKYVFQLKHQ 276 (305)
Q Consensus 210 ~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~---d~~p~~~i~L~~~~v~~~~~~~~--------~~~~F~l~~~ 276 (305)
++++|||++++ .+.|++|||||+++.|+||+++. +..|.+.|+|.+|.|......+. ..+.|.|...
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~ 85 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAK 85 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEES
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeC
Confidence 58999999998 78999999999999999999875 66799999999999987543332 5678888865
Q ss_pred C------ceeEEEEcCCHHHHHHHHHHHHHHHcCC
Q psy2207 277 G------QDPLVFGADNEQSYERWMKAMREATTLS 305 (305)
Q Consensus 277 ~------~~~~~f~a~s~e~~~~Wi~al~~a~~~s 305 (305)
. .+.|+|.|+|.+++++||++|+.++.+|
T Consensus 86 ~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~~~ 120 (120)
T 4a6h_A 86 QNGIIRRGHNWVFKADSYESMMSWFDNLKILTSTS 120 (120)
T ss_dssp SSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred CCCcccCceEEEEEcCCHHHHHHHHHHHHHHhccC
Confidence 4 3589999999999999999999998875
No 10
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.83 E-value=2.3e-19 Score=165.83 Aligned_cols=94 Identities=16% Similarity=0.358 Sum_probs=77.9
Q ss_pred CCceeeeeeecc--C-CCceEEEEEEECCEEEEEccCccCccceEEEe----cCeEEEEcccc-C-C--cceeEEEEeCC
Q psy2207 209 GSQHSGWLHKKS--G-RNWKRYWFVLKDQVMYKYKASEDIKALLSIPV----LGYELEALNEQ-D-N--FKYVFQLKHQG 277 (305)
Q Consensus 209 ~~~~~G~L~~~~--~-~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L----~~~~v~~~~~~-~-~--~~~~F~l~~~~ 277 (305)
+++++|||+|++ . +.|++|||||+++.|+||+++.+..|.|.|+| .++.|...... . . .+++|+|.++
T Consensus 268 ~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~- 346 (386)
T 3lju_X 268 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTP- 346 (386)
T ss_dssp CCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECS-
T ss_pred ccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCccccccCCCcEEEEEeC-
Confidence 346899999998 4 89999999999999999999999999999999 34556532221 1 1 2699999865
Q ss_pred ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 278 QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 278 ~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.++|+|+|+|++++++||.||+.++.
T Consensus 347 ~rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 347 DRKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 57899999999999999999998864
No 11
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.83 E-value=8e-20 Score=140.07 Aligned_cols=92 Identities=25% Similarity=0.465 Sum_probs=79.2
Q ss_pred eeeeeeecc------CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEE--EccccCCcceeEEEEeCCceeEEE
Q psy2207 212 HSGWLHKKS------GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELE--ALNEQDNFKYVFQLKHQGQDPLVF 283 (305)
Q Consensus 212 ~~G~L~~~~------~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~--~~~~~~~~~~~F~l~~~~~~~~~f 283 (305)
++|||++++ .+.|+++||||+++.|+||+++.+..|.+.|+|.++.+. .......++|+|+|.+++.+.|+|
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f 81 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLEL 81 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEE
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCCCCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEE
Confidence 689998763 578999999999999999999999999999999877554 333445678999999887888999
Q ss_pred EcCCHHHHHHHHHHHHHHHc
Q psy2207 284 GADNEQSYERWMKAMREATT 303 (305)
Q Consensus 284 ~a~s~e~~~~Wi~al~~a~~ 303 (305)
+|+|+++|++||.+|+.|+.
T Consensus 82 ~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 82 SAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp ECSSHHHHHHHHHHHHHHHT
T ss_pred EcCCHHHHHHHHHHHHHHhh
Confidence 99999999999999998764
No 12
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.82 E-value=1.8e-19 Score=138.02 Aligned_cols=96 Identities=24% Similarity=0.403 Sum_probs=84.9
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEE-ccccCCcceeEEEEeCCceeEEEE
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEA-LNEQDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~-~~~~~~~~~~F~l~~~~~~~~~f~ 284 (305)
+.++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++.+.. ..+...++++|+|...+.+.|+|.
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~ 82 (113)
T 1pls_A 3 PKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQ 82 (113)
T ss_dssp CCCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEE
T ss_pred CCCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEE
Confidence 3568999999998 6899999999999999999999999999999999988864 334456779999998877899999
Q ss_pred cCCHHHHHHHHHHHHHHHc
Q psy2207 285 ADNEQSYERWMKAMREATT 303 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|++++++|+.+|+.|+.
T Consensus 83 a~s~~e~~~Wi~ai~~~~~ 101 (113)
T 1pls_A 83 AAFLEERDAWVRDINKAIK 101 (113)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 9999999999999998864
No 13
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=99.82 E-value=4.2e-21 Score=138.12 Aligned_cols=68 Identities=32% Similarity=0.829 Sum_probs=58.1
Q ss_pred CCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHhc
Q psy2207 74 VAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQE 142 (305)
Q Consensus 74 ~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~~ 142 (305)
..|.|+||+++..|+.|+.+|++++||||||+||.+||+.|+.++++|+. ..+++|||+.||..+...
T Consensus 9 ~~~~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~-~~~~~RVC~~C~~~l~~~ 76 (82)
T 2yw8_A 9 KGHAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPS-YPKPVRVCDSCHTLLLQR 76 (82)
T ss_dssp ------CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTT-CSSCEEECHHHHHHTTC-
T ss_pred CCCccccCccCCcccCcCCcccCccccccCCCCCCEEChHHhCCeeecCC-CCCcCEECHHHHHHHHHh
Confidence 35899999999999999999999999999999999999999999999986 478999999999998754
No 14
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.82 E-value=1.4e-19 Score=137.77 Aligned_cols=95 Identities=22% Similarity=0.391 Sum_probs=82.1
Q ss_pred CCceeeeeeec--c-CC-CceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcccc-CCcceeEEEEeCCc-----
Q psy2207 209 GSQHSGWLHKK--S-GR-NWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQ-DNFKYVFQLKHQGQ----- 278 (305)
Q Consensus 209 ~~~~~G~L~~~--~-~~-~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~-~~~~~~F~l~~~~~----- 278 (305)
+++..|||+++ + .+ .|++|||||++.+|+||+++.+..|.|.|+|.++.|...... .+++|+|+|++++.
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~ 90 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYK 90 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSST
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcccccceEEECCCceEeccCCCCCCCceEEEEECCCCccccc
Confidence 36899999996 3 55 599999999999999999999999999999999998864432 36789999998754
Q ss_pred --eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 --DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 --~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+.|.|+|+|.++++.|+++|.+|..
T Consensus 91 ~h~~y~LsA~t~ee~~~Wi~s~~ra~v 117 (125)
T 1dyn_A 91 DYRQLELACETQEEVDSWKASFLRAGV 117 (125)
T ss_dssp TCSSEEEEESSHHHHHHHHHHHHHTTC
T ss_pred cceEEEEeCCCHHHHHHHHHHHHhCcc
Confidence 3899999999999999999987753
No 15
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.82 E-value=2e-19 Score=141.40 Aligned_cols=98 Identities=18% Similarity=0.374 Sum_probs=82.9
Q ss_pred CCCCCceeeeeeec-----c---CCCceEEEEEEECCEEEEEccCc-----------cCccceEEEecCeEEEEccccCC
Q psy2207 206 NDSGSQHSGWLHKK-----S---GRNWKRYWFVLKDQVMYKYKASE-----------DIKALLSIPVLGYELEALNEQDN 266 (305)
Q Consensus 206 ~~~~~~~~G~L~~~-----~---~~~wkrrw~vL~~~~L~~y~~~~-----------d~~p~~~i~L~~~~v~~~~~~~~ 266 (305)
....+.++|||+++ + .+.|++|||||+++.|+||+++. +..|.+.|+|.++.|....+...
T Consensus 8 ~~~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~k 87 (129)
T 2p0d_A 8 GSHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSS 87 (129)
T ss_dssp -CCSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEECTTSCS
T ss_pred CCcceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEECCCCCC
Confidence 34466899999985 3 47999999999999999999983 56899999999999987655556
Q ss_pred cceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 267 FKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 267 ~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
++++|+|.+.+.+.|+|+|+|++++++||.+|+.|+.
T Consensus 88 r~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~ 124 (129)
T 2p0d_A 88 RRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIE 124 (129)
T ss_dssp SSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 7899999987778899999999999999999998864
No 16
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=99.81 E-value=4.4e-21 Score=148.88 Aligned_cols=66 Identities=38% Similarity=0.831 Sum_probs=61.8
Q ss_pred CCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 74 VAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 74 ~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
.+|.|+||+++..|+.|+.+|++++||||||+||.|||+.||.+++++|. ..+++|||+.||..+.
T Consensus 59 ~~~~W~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~-~~~p~RVC~~C~~~l~ 124 (125)
T 1joc_A 59 LNRKWAEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPS-SKKPVRVCDACFNDLQ 124 (125)
T ss_dssp HHCCCCCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECCTT-CSSCEEECHHHHHHTT
T ss_pred CCCccccCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCCccccCC-CCCCCEeCHHHHHHhc
Confidence 46899999999999999999999999999999999999999999999885 5799999999999875
No 17
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.81 E-value=2.5e-19 Score=143.76 Aligned_cols=96 Identities=18% Similarity=0.291 Sum_probs=82.1
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcc-ccCCcceeEEEEeCCceeEEEE
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALN-EQDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~-~~~~~~~~F~l~~~~~~~~~f~ 284 (305)
.+++++|||+|++ .+.|++|||||+++.|+||+++.+..+.+.|+|.++.+.... ......++|+|.++ .++|+|+
T Consensus 16 ~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~-~r~~~f~ 94 (149)
T 1x1f_A 16 LPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLP-KEEVQLK 94 (149)
T ss_dssp SCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCTTSCCCEEEEECS-SCCEEEE
T ss_pred CCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCCCCcCcEEEEEcC-CCEEEEE
Confidence 3478999999998 789999999999999999999999999999999888776332 22334689999854 5679999
Q ss_pred cCCHHHHHHHHHHHHHHHcC
Q psy2207 285 ADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~~~ 304 (305)
|+|++++++||+||+.++.+
T Consensus 95 A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 95 TENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp CSSHHHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHHHcc
Confidence 99999999999999988765
No 18
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.81 E-value=5.3e-19 Score=134.32 Aligned_cols=96 Identities=19% Similarity=0.342 Sum_probs=82.1
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECC--EEEEEccCccCccceEEEecCeEEEEcccc-----CCcceeEEEEeCCc
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQ--VMYKYKASEDIKALLSIPVLGYELEALNEQ-----DNFKYVFQLKHQGQ 278 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~--~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~-----~~~~~~F~l~~~~~ 278 (305)
..++++|||++++ .+.|++|||||.++ .|+||+++.+..|.+.|+|.++.|...... .+.+++|+|.+++.
T Consensus 5 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~ 84 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADE 84 (109)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC--------CCSEEEEECTTC
T ss_pred CceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCC
Confidence 3468999999998 67899999999976 999999999999999999999887643322 13679999998877
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+.|+|+|+|+++++.|+.+|+.|+.
T Consensus 85 ~~~~l~a~s~~e~~~Wi~ai~~~~k 109 (109)
T 2i5f_A 85 VHYFLQAATPKERTEWIKAIQMASR 109 (109)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 7899999999999999999999874
No 19
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=5.8e-19 Score=136.93 Aligned_cols=97 Identities=31% Similarity=0.669 Sum_probs=84.9
Q ss_pred CCCceeeeeeecc---CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcc--ccCCcceeEEEEeCCceeEE
Q psy2207 208 SGSQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALN--EQDNFKYVFQLKHQGQDPLV 282 (305)
Q Consensus 208 ~~~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~--~~~~~~~~F~l~~~~~~~~~ 282 (305)
..++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++.|.... +...++++|+|.+++.+.|+
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~ 99 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYF 99 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEE
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEE
Confidence 3468999999986 678999999999999999999999999999999988766442 23456799999877778999
Q ss_pred EEcCCHHHHHHHHHHHHHHHcC
Q psy2207 283 FGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 283 f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
|+|+|+++++.||.+|+.|+++
T Consensus 100 l~a~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 100 FSAESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp EECSSHHHHHHHHHHHHHHHCC
T ss_pred EEcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999875
No 20
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=99.80 E-value=1e-20 Score=133.07 Aligned_cols=66 Identities=33% Similarity=0.754 Sum_probs=57.2
Q ss_pred CCCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCC-CccccccHhhHHHHHh
Q psy2207 73 KVAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKK-FRNFRVCEECYHYLVQ 141 (305)
Q Consensus 73 ~~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~-~~~~rvC~~C~~~~~~ 141 (305)
..+|.|++| ..|+.|+.+|++++||||||+||.+||+.||.++++|+..+ .+++|||+.||..+..
T Consensus 3 ~~~p~W~~~---~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~ 69 (73)
T 1vfy_A 3 KTPADWIDS---DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYEF 69 (73)
T ss_dssp ----CCCCC---SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHHH
T ss_pred CCCCcCccC---CcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHHH
Confidence 458999997 47999999999999999999999999999999999998766 5899999999998864
No 21
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.80 E-value=8.1e-19 Score=137.27 Aligned_cols=97 Identities=31% Similarity=0.582 Sum_probs=85.0
Q ss_pred CCCceeeeeeecc---CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcccc--CCcceeEEEEeCCceeEE
Q psy2207 208 SGSQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQ--DNFKYVFQLKHQGQDPLV 282 (305)
Q Consensus 208 ~~~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~--~~~~~~F~l~~~~~~~~~ 282 (305)
..++++|||++++ .+.|++|||||+++.|+||+++.+..|.+.|+|.++.|...... ..++++|+|.+++.+.|+
T Consensus 19 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~ 98 (128)
T 2dkp_A 19 APVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYY 98 (128)
T ss_dssp SCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEE
T ss_pred CCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEE
Confidence 4568999999987 57899999999999999999999999999999999988765322 356799999987778899
Q ss_pred EEcCCHHHHHHHHHHHHHHHcC
Q psy2207 283 FGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 283 f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
|+|+|++++++|+.+|+.|+.+
T Consensus 99 l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 99 FCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp EECSSHHHHHHHHHHHHHHHSC
T ss_pred EEcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998753
No 22
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.1e-18 Score=134.32 Aligned_cols=96 Identities=31% Similarity=0.670 Sum_probs=84.4
Q ss_pred CCCceeeeeeecc---CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcc--ccCCcceeEEEEeCCceeEE
Q psy2207 208 SGSQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALN--EQDNFKYVFQLKHQGQDPLV 282 (305)
Q Consensus 208 ~~~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~--~~~~~~~~F~l~~~~~~~~~ 282 (305)
..++++|||++++ .+.|++|||||+++.|+||+++.+..|.+.|+|.++.|.... +...++++|+|.+++.+.|+
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~ 88 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYF 88 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEE
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEE
Confidence 3468999999986 678999999999999999999999999999999998876542 23456799999877778899
Q ss_pred EEcCCHHHHHHHHHHHHHHHc
Q psy2207 283 FGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 283 f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|+|+++++.|+.+|+.|+.
T Consensus 89 l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 89 FSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp EECSSHHHHHHHHHHHHHTTC
T ss_pred EEcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 23
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=9.5e-19 Score=134.68 Aligned_cols=97 Identities=32% Similarity=0.617 Sum_probs=84.3
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccc--cCCcceeEEEEeC-------
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNE--QDNFKYVFQLKHQ------- 276 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~--~~~~~~~F~l~~~------- 276 (305)
..++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++.+..... ...++++|+|.+.
T Consensus 6 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~ 85 (118)
T 1v89_A 6 SGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRM 85 (118)
T ss_dssp SCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCS
T ss_pred CCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccC
Confidence 4568999999998 7789999999999999999999999999999999998874322 2356799999973
Q ss_pred CceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 277 GQDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 277 ~~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
..+.|+|+|+|+++++.||.+|+.|+..
T Consensus 86 ~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 113 (118)
T 1v89_A 86 GQDSYVLMASSQAEMEEWVKFLRRVAGS 113 (118)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHHHcc
Confidence 6778999999999999999999998753
No 24
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=5.5e-19 Score=133.75 Aligned_cols=95 Identities=19% Similarity=0.401 Sum_probs=83.3
Q ss_pred CCceeeeeeecc--C----CCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcc---ccCCcceeEEEEeCCce
Q psy2207 209 GSQHSGWLHKKS--G----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALN---EQDNFKYVFQLKHQGQD 279 (305)
Q Consensus 209 ~~~~~G~L~~~~--~----~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~---~~~~~~~~F~l~~~~~~ 279 (305)
+++++|||++++ . +.|++|||||.++.|+||+++.+..|.+.|+|.++.+...+ .....+++|+|.+++.+
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r 81 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRR 81 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSC
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCc
Confidence 457999999987 2 78999999999999999999999999999999999987653 23356799999987768
Q ss_pred eEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 280 PLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 280 ~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.|+|+|+|+++++.|+.+|+.|+.
T Consensus 82 ~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 82 TYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999998864
No 25
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.80 E-value=3.4e-20 Score=171.44 Aligned_cols=93 Identities=12% Similarity=0.213 Sum_probs=77.5
Q ss_pred Cceeeeeeecc--CCCceEEEEEE--ECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEe---CCceeEE
Q psy2207 210 SQHSGWLHKKS--GRNWKRYWFVL--KDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKH---QGQDPLV 282 (305)
Q Consensus 210 ~~~~G~L~~~~--~~~wkrrw~vL--~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~---~~~~~~~ 282 (305)
.+++|||+|++ .+.|++||||| +++.|+||+++.+..|.|.|+|.++.+...+...+.+++|+|.. ++.+.|+
T Consensus 146 ~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~ 225 (386)
T 3lju_X 146 GYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIF 225 (386)
T ss_dssp SEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEE
T ss_pred cccccceeeeccccCCceEEEEEEEcCCCEEEEECCCCccCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEE
Confidence 47999999999 78999999999 79999999999999999999999987777544446789999973 6668999
Q ss_pred EEcCCHHHHHHHHHHHHHHH
Q psy2207 283 FGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 283 f~a~s~e~~~~Wi~al~~a~ 302 (305)
|+|+|.+++.+|+++|+.|.
T Consensus 226 l~A~s~~e~~~Wi~aIr~a~ 245 (386)
T 3lju_X 226 IYHEDGKEIVDWFNALRAAR 245 (386)
T ss_dssp EECSSHHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHhhhhcc
Confidence 99999999999999998773
No 26
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.79 E-value=1.2e-18 Score=135.33 Aligned_cols=95 Identities=29% Similarity=0.608 Sum_probs=84.0
Q ss_pred Cceeeeeeecc---CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccc--cCCcceeEEEEeCCceeEEEE
Q psy2207 210 SQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNE--QDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 210 ~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~--~~~~~~~F~l~~~~~~~~~f~ 284 (305)
++++|||++++ .+.|++|||||+++.|+||+++.+..|.+.|+|.++.|..... ....+|+|.|.+++.+.|+|.
T Consensus 11 ~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~ 90 (123)
T 1upq_A 11 VHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLA 90 (123)
T ss_dssp EEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEE
T ss_pred ceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEE
Confidence 57999999987 5789999999999999999999999999999999999887643 235679999998777889999
Q ss_pred cCCHHHHHHHHHHHHHHHcC
Q psy2207 285 ADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~~~ 304 (305)
|+|++++..||.+|+.|+..
T Consensus 91 a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 91 ADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp CSSHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999998753
No 27
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=134.49 Aligned_cols=93 Identities=23% Similarity=0.453 Sum_probs=81.0
Q ss_pred CCCCceeeeeeecc----CCCceEEEEEEECC--EEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCcee
Q psy2207 207 DSGSQHSGWLHKKS----GRNWKRYWFVLKDQ--VMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDP 280 (305)
Q Consensus 207 ~~~~~~~G~L~~~~----~~~wkrrw~vL~~~--~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~ 280 (305)
..+++++|||+|++ .+.|++|||||+++ .|+||+++.+..|.+.|+|.++.+.... ...+++|+|... .++
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~--~~~~~~F~i~~~-~r~ 81 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKA--DAEEGIFEIKTP-SRV 81 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECT--TGGGCEEEEECS-SCC
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecC--CCCCCEEEEEeC-CcE
Confidence 34568999999997 46899999999998 9999999999999999999998887643 245689999855 678
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q psy2207 281 LVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 281 ~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
|+|+|+|++++++||.+|+.|+
T Consensus 82 ~~l~a~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 82 ITLKAATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp EEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 28
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.79 E-value=8.9e-19 Score=131.87 Aligned_cols=89 Identities=22% Similarity=0.389 Sum_probs=77.7
Q ss_pred eeeeeeecc--CCCceEEEEEEECCEEEEEccCccC--ccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEcCC
Q psy2207 212 HSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDI--KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADN 287 (305)
Q Consensus 212 ~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~--~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a~s 287 (305)
++|||+|++ .+.|++|||||.++.|+||+++.+. .|.|.|+|.++.|...+. .++.|.|..++.++|+|+|+|
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~~---~~~~F~i~~~~~r~~~l~a~s 77 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSA---DNTRMELIIPGEQHFYMKAVN 77 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGGCEEECCTT---CSSEEEEEETTTEEEEEECSS
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCcccCCcccEEEeeeeEEEEcCC---CCceEEEEeCCCCEEEEECCC
Confidence 579999998 6899999999999999999998863 599999999998876533 357999998878899999999
Q ss_pred HHHHHHHHHHHHHHHc
Q psy2207 288 EQSYERWMKAMREATT 303 (305)
Q Consensus 288 ~e~~~~Wi~al~~a~~ 303 (305)
+++++.|+.+|+.|..
T Consensus 78 ~~e~~~Wi~al~~a~~ 93 (103)
T 3rcp_A 78 AAERQRWLVALGSSKA 93 (103)
T ss_dssp HHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 29
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.78 E-value=1.6e-18 Score=135.84 Aligned_cols=98 Identities=18% Similarity=0.330 Sum_probs=84.1
Q ss_pred CCCCceeeeeeecc--CCCceEEEEEEECC--EEEEEccCccCccceEEEecCeEEEEcccc-----CCcceeEEEEeCC
Q psy2207 207 DSGSQHSGWLHKKS--GRNWKRYWFVLKDQ--VMYKYKASEDIKALLSIPVLGYELEALNEQ-----DNFKYVFQLKHQG 277 (305)
Q Consensus 207 ~~~~~~~G~L~~~~--~~~wkrrw~vL~~~--~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~-----~~~~~~F~l~~~~ 277 (305)
...++++|||++++ .+.|++|||||.++ .|+||+++.+..|.+.|+|.++.|...... .+.+++|+|.+++
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~ 94 (129)
T 1x05_A 15 RGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITAD 94 (129)
T ss_dssp CSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTT
T ss_pred cCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCC
Confidence 34468999999998 67899999999865 999999998999999999999888754322 1367999999877
Q ss_pred ceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 278 QDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 278 ~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
.+.|+|+|+|+++++.||.+|+.|+..
T Consensus 95 ~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 95 EVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp CCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 778999999999999999999998753
No 30
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.78 E-value=2.1e-18 Score=134.68 Aligned_cols=96 Identities=17% Similarity=0.296 Sum_probs=83.0
Q ss_pred CCCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEE
Q psy2207 207 DSGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 207 ~~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~ 284 (305)
...++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++.+.........+++|.|.++ .+.|+|.
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~-~r~~~l~ 93 (126)
T 1fao_A 15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVFP-FRTFYLC 93 (126)
T ss_dssp CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEET-TEEEEEE
T ss_pred CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEeC-CcEEEEE
Confidence 34568999999998 78899999999999999999999999999999998875544444566799999865 5679999
Q ss_pred cCCHHHHHHHHHHHHHHHc
Q psy2207 285 ADNEQSYERWMKAMREATT 303 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|+++++.|+.+|+.|+.
T Consensus 94 a~s~~e~~~Wi~al~~~i~ 112 (126)
T 1fao_A 94 AKTGVEADEWIKILRWKLS 112 (126)
T ss_dssp CSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 31
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=9.6e-19 Score=132.81 Aligned_cols=95 Identities=19% Similarity=0.413 Sum_probs=80.5
Q ss_pred CCCceeeeeeeccCCCceEEEEEEECCEEEEEccCcc-CccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEcC
Q psy2207 208 SGSQHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASED-IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGAD 286 (305)
Q Consensus 208 ~~~~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~d-~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a~ 286 (305)
.++.++|||+++..+.|++|||||+++.|+||+++.+ ..+.+.|+|.++.|...+. ..++++|+|.+++.++|+|+|+
T Consensus 6 ~~~~~~G~L~K~~~k~Wk~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~-~~~~~~F~i~~~~~r~~~l~A~ 84 (107)
T 2cof_A 6 SGLETSSYLNVLVNSQWKSRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPS-PDHLYSFRILHKGEELAKLEAK 84 (107)
T ss_dssp CCCTTCCEEEEEETTEEEEEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCB-TTBSCEEEEEETTEEEEEEECS
T ss_pred CCCcEeEEEEEecCCCcceEEEEEECCEEEEEeCCcccCCCeeEEeccceEEEECCC-CCCCeEEEEEeCCCeEEEEEcC
Confidence 4567999999987789999999999999999998865 4556667778887776543 4677999999877889999999
Q ss_pred CHHHHHHHHHHHHHHHc
Q psy2207 287 NEQSYERWMKAMREATT 303 (305)
Q Consensus 287 s~e~~~~Wi~al~~a~~ 303 (305)
|++++++||++|+.|+.
T Consensus 85 s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 85 SSEEMGHWLGLLLSESG 101 (107)
T ss_dssp SHHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHHc
Confidence 99999999999998864
No 32
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=2.7e-18 Score=131.68 Aligned_cols=96 Identities=24% Similarity=0.459 Sum_probs=82.3
Q ss_pred CCCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCe-EEEEccccCCcceeEEEEeCCceeEEE
Q psy2207 207 DSGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGY-ELEALNEQDNFKYVFQLKHQGQDPLVF 283 (305)
Q Consensus 207 ~~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~-~v~~~~~~~~~~~~F~l~~~~~~~~~f 283 (305)
...++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++ .|...++...++++|.|..+ .+.|+|
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~-~r~~~l 83 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKDGKKCLFLVKCF-DKTFEI 83 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCTTCCSEEEEECS-SCEEEE
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCCCCeeEEEEEeC-CCEEEE
Confidence 34568999999998 789999999999999999999999999999999874 55555444566799999854 567999
Q ss_pred EcCCHHHHHHHHHHHHHHHc
Q psy2207 284 GADNEQSYERWMKAMREATT 303 (305)
Q Consensus 284 ~a~s~e~~~~Wi~al~~a~~ 303 (305)
+|+|+++++.|+.+|+.|+.
T Consensus 84 ~a~s~~e~~~Wi~ai~~~~~ 103 (115)
T 2dn6_A 84 SASDKKKKQEWIQAIHSTIH 103 (115)
T ss_dssp ECSSHHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999998874
No 33
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.78 E-value=3.5e-18 Score=133.27 Aligned_cols=94 Identities=23% Similarity=0.514 Sum_probs=82.4
Q ss_pred CCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCC---------
Q psy2207 209 GSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQG--------- 277 (305)
Q Consensus 209 ~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~--------- 277 (305)
+++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++.|....+ ..++++|+|..++
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~-~~~~~~f~i~~~~~~~~~~~~~ 82 (127)
T 1fgy_A 4 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLD-PRKPNCFELYNPSHKGQVIKAC 82 (127)
T ss_dssp SCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECC-SSCSSEEEEECSSSTTCCCCCE
T ss_pred CCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCceEEEEccC-CCCCceEEEecCCccccccccc
Confidence 457999999998 7789999999999999999999999999999999998876543 3667999998653
Q ss_pred ------------ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 278 ------------QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 278 ------------~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.+.|+|.|+|+++++.||.+|+.|+.
T Consensus 83 ~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 83 KTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp EECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 35899999999999999999998864
No 34
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.77 E-value=3.9e-18 Score=137.03 Aligned_cols=96 Identities=19% Similarity=0.402 Sum_probs=84.0
Q ss_pred CCCceeeeeeecc--C----CCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccc---cCCcceeEEEEeCCc
Q psy2207 208 SGSQHSGWLHKKS--G----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNE---QDNFKYVFQLKHQGQ 278 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~----~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~---~~~~~~~F~l~~~~~ 278 (305)
..++++|||++++ . +.|++|||||+++.|+||+++.+..|.+.|+|.++.|...+. ...++++|+|..++.
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~ 94 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK 94 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTS
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCcccCCCCccEEEEECCCC
Confidence 4568999999998 2 589999999999999999999999999999999998876442 345569999998776
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+.|+|.|+|+++++.||.+|+.|+.
T Consensus 95 r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 95 RIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHH
Confidence 8899999999999999999998864
No 35
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.77 E-value=1.3e-18 Score=135.75 Aligned_cols=96 Identities=18% Similarity=0.300 Sum_probs=79.4
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCcc---------CccceEEEecCeEEEEcccc-CCcceeEEEEe
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED---------IKALLSIPVLGYELEALNEQ-DNFKYVFQLKH 275 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d---------~~p~~~i~L~~~~v~~~~~~-~~~~~~F~l~~ 275 (305)
..++++|||++++ .+.|++|||||+++.|+||+.+.+ ..+.|.|+|.++.|....+. ..++|+|+|.+
T Consensus 10 ~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~ 89 (124)
T 2w2x_D 10 DEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQGKNQKSFVFILEP 89 (124)
T ss_dssp ---CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTTCBTTBSEEEEEEE
T ss_pred hhcceeEEEEEECCCCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccCCcCCCCEEEEEEC
Confidence 3457999999998 788999999999999999997532 23589999999999876532 45779999998
Q ss_pred CC--ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 276 QG--QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 276 ~~--~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.. .++|+|.|+|.+++++||.||+.|+.
T Consensus 90 ~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~ 119 (124)
T 2w2x_D 90 KQQGDPPVEFATDKVEELFEWFQSIREITW 119 (124)
T ss_dssp CC--CCCEEEEECCCHHHHHHHHHHHHHHC
T ss_pred CCCCCceEEEEECCHHHHHHHHHHHHHHHH
Confidence 65 46799999999999999999998874
No 36
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.77 E-value=2.6e-18 Score=133.66 Aligned_cols=97 Identities=23% Similarity=0.391 Sum_probs=81.4
Q ss_pred CCCCceeeeeeecc----------CCCceEEEEEEECCEEEEEccCccCc------cceEEEecCeEEEEccccCCccee
Q psy2207 207 DSGSQHSGWLHKKS----------GRNWKRYWFVLKDQVMYKYKASEDIK------ALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 207 ~~~~~~~G~L~~~~----------~~~wkrrw~vL~~~~L~~y~~~~d~~------p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
...+.++|||++++ .+.|++|||||+++.|+||+++.+.. +...|+|.++.+....+...++|+
T Consensus 5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~r~~~ 84 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFDYRKRKHV 84 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTTCSSCSSE
T ss_pred CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeecccccCCCCE
Confidence 34567999999875 46899999999999999999977642 345688888888776655678899
Q ss_pred EEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 271 FQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 271 F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|.+.+.+.|+|+|+|++++++||.+|+.|+.
T Consensus 85 F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 85 FKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp EEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence 999987778899999999999999999998864
No 37
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.77 E-value=3.3e-18 Score=133.68 Aligned_cols=93 Identities=13% Similarity=0.326 Sum_probs=77.0
Q ss_pred ceeeeeeecc---CCCceEEEEEEE---CCEEEEEcc----CccCccceEEEecC-eEEEEcc--ccCCcceeEEEEeCC
Q psy2207 211 QHSGWLHKKS---GRNWKRYWFVLK---DQVMYKYKA----SEDIKALLSIPVLG-YELEALN--EQDNFKYVFQLKHQG 277 (305)
Q Consensus 211 ~~~G~L~~~~---~~~wkrrw~vL~---~~~L~~y~~----~~d~~p~~~i~L~~-~~v~~~~--~~~~~~~~F~l~~~~ 277 (305)
.++|||+|++ .+.|++|||||+ +..|+||++ +.+..|.|.|+|.. ..|.... .....+|+|.|. ++
T Consensus 16 ~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~-t~ 94 (126)
T 1v5p_A 16 RICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVIN-AL 94 (126)
T ss_dssp CEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEE-CS
T ss_pred ceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCCCCCEEEEEE-CC
Confidence 5899999986 679999999999 667888898 56788999999987 5666543 233556899775 67
Q ss_pred ceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 278 QDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 278 ~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
.++|+|.|+|+++++.||+||+.|+..
T Consensus 95 ~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 95 SQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp SCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999998764
No 38
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=134.68 Aligned_cols=93 Identities=16% Similarity=0.322 Sum_probs=80.0
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEE--CCEEEEEccCccC--ccceEEEecCeEEEEccccCCcceeEEEEeCCceeE
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLK--DQVMYKYKASEDI--KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPL 281 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~--~~~L~~y~~~~d~--~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~ 281 (305)
..+.++|||+|++ .+.|++|||||+ ++.|+||+++.+. .|.+.|+|.++.|...+ ..+++|+|.+++.++|
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~~---~~~~~F~i~~~~~r~~ 82 (120)
T 2d9x_A 6 SGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSD---EDSHTFTVNAASGEQY 82 (120)
T ss_dssp SCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCS---SSSSCEEECCSSSCCE
T ss_pred CCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEecC---CCCCEEEEEcCCCCEE
Confidence 3457999999998 689999999998 5799999998774 78999999998876543 3458999997766889
Q ss_pred EEEcCCHHHHHHHHHHHHHHHc
Q psy2207 282 VFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 282 ~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+|.|+|++++++||.+|+.|+.
T Consensus 83 ~l~a~s~~e~~~Wi~al~~~~~ 104 (120)
T 2d9x_A 83 KLRATDAKERQHWVSRLQICTQ 104 (120)
T ss_dssp EECCSSHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 39
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.77 E-value=1.5e-18 Score=132.61 Aligned_cols=95 Identities=17% Similarity=0.329 Sum_probs=79.3
Q ss_pred CCceeeeeeecc--CCCceEEEEEE-ECCEEEEEccCccCccceEEEecCeEEEE----------ccccCCcceeEEEEe
Q psy2207 209 GSQHSGWLHKKS--GRNWKRYWFVL-KDQVMYKYKASEDIKALLSIPVLGYELEA----------LNEQDNFKYVFQLKH 275 (305)
Q Consensus 209 ~~~~~G~L~~~~--~~~wkrrw~vL-~~~~L~~y~~~~d~~p~~~i~L~~~~v~~----------~~~~~~~~~~F~l~~ 275 (305)
.++++|||++++ .+.|++||||| .++.|+||+++.+..+.+.|+|....+.. .++...++++|.|.+
T Consensus 4 ~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~ 83 (112)
T 3aj4_A 4 AFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVC 83 (112)
T ss_dssp SCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEE
T ss_pred ceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEEe
Confidence 357999999998 78999999999 89999999999998999999996544321 112223468999998
Q ss_pred CCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 276 QGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 276 ~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
++.++|+|+|+|+++++.|+.||+.|..
T Consensus 84 ~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 84 RDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 8788999999999999999999998863
No 40
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=2.7e-18 Score=135.04 Aligned_cols=96 Identities=23% Similarity=0.381 Sum_probs=78.7
Q ss_pred CCCceeeeeeecc--CCCceEEEEEE-ECCEEEEEccCccCccceEEEecC-e-EEEE--------ccccCCcceeEEEE
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVL-KDQVMYKYKASEDIKALLSIPVLG-Y-ELEA--------LNEQDNFKYVFQLK 274 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL-~~~~L~~y~~~~d~~p~~~i~L~~-~-~v~~--------~~~~~~~~~~F~l~ 274 (305)
..++++|||+|++ .+.|++||||| +++.|+||+++.+..+.+.|.|.. + .+.. .++...++++|+|.
T Consensus 6 ~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~ 85 (130)
T 2d9v_A 6 SGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVN 85 (130)
T ss_dssp CCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEE
T ss_pred CceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEEE
Confidence 4467999999998 78999999999 899999999998888899887742 2 2221 11223456899999
Q ss_pred eCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 275 HQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 275 ~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+.+.++|+|+|+|++++++||+||+.|..
T Consensus 86 ~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 86 LREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp ETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 87767899999999999999999999875
No 41
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.77 E-value=2.1e-18 Score=127.74 Aligned_cols=88 Identities=18% Similarity=0.338 Sum_probs=76.2
Q ss_pred ceeeeeeecc--CCCceEEEEEEECCEEEEEccCcc--CccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEcC
Q psy2207 211 QHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGAD 286 (305)
Q Consensus 211 ~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d--~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a~ 286 (305)
..+|||+|++ .+.|++|||||.++.|+||+++.+ ..|.+.|+|.++.+.... ..++.|.|..+ .++|+|+|+
T Consensus 2 ~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~F~i~~~-~r~~~l~A~ 77 (94)
T 2rsg_A 2 ERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHD---FDECRFDISVN-DSVWYLRAQ 77 (94)
T ss_dssp CEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEECS---SCSSEEEEEET-TEEEEEECC
T ss_pred CEEEEEEEeCCCCCCceEEEEEEECCEEEEEEecccccccceeeEecceeeeecCc---ccceeEEEEeC-CeEEEEECC
Confidence 5899999998 789999999999999999998765 458899999998887653 34579999865 567999999
Q ss_pred CHHHHHHHHHHHHHHH
Q psy2207 287 NEQSYERWMKAMREAT 302 (305)
Q Consensus 287 s~e~~~~Wi~al~~a~ 302 (305)
|++++++||+||++|.
T Consensus 78 s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 78 DPDHRQQWIDAIEQHK 93 (94)
T ss_dssp SSCCTHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhhc
Confidence 9999999999999873
No 42
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.77 E-value=5.4e-18 Score=130.37 Aligned_cols=96 Identities=25% Similarity=0.370 Sum_probs=81.0
Q ss_pred CCCCceeeeeeecc--CCCceEEEEEEE--CCEEEEEccCccCccceEEEecCeEEEEccc-------cCCcceeEEEEe
Q psy2207 207 DSGSQHSGWLHKKS--GRNWKRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEALNE-------QDNFKYVFQLKH 275 (305)
Q Consensus 207 ~~~~~~~G~L~~~~--~~~wkrrw~vL~--~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~-------~~~~~~~F~l~~ 275 (305)
.+.++++|||++++ .+.|++|||||. ++.|+||+++.+..|.+.|+|.++.+..... .....++|+|..
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~ 84 (117)
T 1v5u_A 5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT 84 (117)
T ss_dssp CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE
T ss_pred cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEEC
Confidence 34568999999998 689999999999 8899999999999999999999887664322 134458999975
Q ss_pred CCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 276 QGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 276 ~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
..+.|+|+|+|+++++.||.+|+.|+.
T Consensus 85 -~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 85 -TRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp -SSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred -CCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 556799999999999999999998764
No 43
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.76 E-value=1.2e-17 Score=129.37 Aligned_cols=92 Identities=22% Similarity=0.432 Sum_probs=78.5
Q ss_pred ceeeeeeec-----c----CCCceEEEEEEECCEEEEEccCc---------cCccceEEEecCeEEEEccccCCcceeEE
Q psy2207 211 QHSGWLHKK-----S----GRNWKRYWFVLKDQVMYKYKASE---------DIKALLSIPVLGYELEALNEQDNFKYVFQ 272 (305)
Q Consensus 211 ~~~G~L~~~-----~----~~~wkrrw~vL~~~~L~~y~~~~---------d~~p~~~i~L~~~~v~~~~~~~~~~~~F~ 272 (305)
.+.|||.++ | .+.|+++||+|.|+.||||+... +..|.+.|+|.|+.|. ..+...++++|+
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~-~~e~~~~~~~F~ 80 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQ-LPDDPEHPDIFQ 80 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEE-CCCCTTSTTEEE
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEE-ecCCCCCCCEEE
Confidence 478888865 3 36799999999999999999763 5689999999999998 445556789999
Q ss_pred EEeC-CceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 273 LKHQ-GQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 273 l~~~-~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|... .+..|.|+|+|++++..|++||+.|+.
T Consensus 81 L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 81 LNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp EECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 9975 566799999999999999999999874
No 44
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.76 E-value=1.2e-17 Score=130.24 Aligned_cols=97 Identities=21% Similarity=0.391 Sum_probs=81.5
Q ss_pred CCCCceeeeeeecc---------CCCceEEEEEEECCEEEEEccCccC------------ccceEEEecCeEEEEcc-cc
Q psy2207 207 DSGSQHSGWLHKKS---------GRNWKRYWFVLKDQVMYKYKASEDI------------KALLSIPVLGYELEALN-EQ 264 (305)
Q Consensus 207 ~~~~~~~G~L~~~~---------~~~wkrrw~vL~~~~L~~y~~~~d~------------~p~~~i~L~~~~v~~~~-~~ 264 (305)
...+.+.|||+++. .+.|+++||||+++.|+||+++.+. .|.+.|+|.++.+.... +.
T Consensus 5 ~~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~d~ 84 (124)
T 3pp2_A 5 TKTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPKDK 84 (124)
T ss_dssp ----CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCGGG
T ss_pred CCcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEeccccc
Confidence 34567999999873 3689999999999999999987654 47789999999998874 55
Q ss_pred CCcceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 265 DNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 265 ~~~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
..++++|+|...+.+.|+|+|+|+++++.|+.+|+.|++
T Consensus 85 ~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 85 SSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp CSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 677899999987778899999999999999999999875
No 45
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=9.9e-18 Score=128.72 Aligned_cols=90 Identities=22% Similarity=0.435 Sum_probs=77.5
Q ss_pred CCCceeeeeeecc---CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEE
Q psy2207 208 SGSQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 208 ~~~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~ 284 (305)
..++++|||+|++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++..+.... +++|.|.. ..+.|+|+
T Consensus 6 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----~~~F~i~~-~~r~~~l~ 80 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG----DNKFEVVT-TQRTFVFR 80 (115)
T ss_dssp SCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET----TTEEEEEE-SSCCEEEE
T ss_pred CCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC----CCEEEEEe-CCcEEEEE
Confidence 3467999999987 5789999999999999999999998999999998875443321 47999984 56789999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q psy2207 285 ADNEQSYERWMKAMREAT 302 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~ 302 (305)
|+|++++++||.+|+.|+
T Consensus 81 a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 81 VEKEEERNDWISILLNAL 98 (115)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 999999999999999886
No 46
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=6.9e-18 Score=131.32 Aligned_cols=96 Identities=22% Similarity=0.365 Sum_probs=80.6
Q ss_pred CCCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEc-c--ccCCcceeEEEEeCCceeE
Q psy2207 207 DSGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEAL-N--EQDNFKYVFQLKHQGQDPL 281 (305)
Q Consensus 207 ~~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~-~--~~~~~~~~F~l~~~~~~~~ 281 (305)
...++++|||++++ .+.|++|||||.++.|+||+++.+..|.+.|+|.++..+.. . +...++++|+|.. ..+.|
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~-~~r~~ 89 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVT-TSRTF 89 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEEC-SSCEE
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeeccccccCCcCCEEEEEe-CCcEE
Confidence 34568999999998 68899999999999999999999999999999988754432 1 1235578999985 45679
Q ss_pred EEEcCCHHHHHHHHHHHHHHHc
Q psy2207 282 VFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 282 ~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+|+|+|+++++.|+.+|+.|+.
T Consensus 90 ~l~a~s~~e~~~W~~al~~~i~ 111 (125)
T 1eaz_A 90 YVQADSPEEMHSWIKAVSGAIV 111 (125)
T ss_dssp EEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998864
No 47
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.75 E-value=8.6e-18 Score=126.91 Aligned_cols=90 Identities=23% Similarity=0.466 Sum_probs=76.7
Q ss_pred eeeeeeecc----------CCCceEEEEEEECCEEEEEccCcc----C--ccceEEEecCeEEEEccccCCcceeEEEEe
Q psy2207 212 HSGWLHKKS----------GRNWKRYWFVLKDQVMYKYKASED----I--KALLSIPVLGYELEALNEQDNFKYVFQLKH 275 (305)
Q Consensus 212 ~~G~L~~~~----------~~~wkrrw~vL~~~~L~~y~~~~d----~--~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~ 275 (305)
++|||++++ .+.|++|||||+++.|+||+++.+ . .+...|+|.++.+.+..+...++++|+|.+
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~ 80 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRL 80 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSCCSSSSEEEEEC
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccccCCccEEEEEe
Confidence 579998885 468999999999999999998764 1 366789998888877655567789999997
Q ss_pred CCceeEEEEcCCHHHHHHHHHHHHHH
Q psy2207 276 QGQDPLVFGADNEQSYERWMKAMREA 301 (305)
Q Consensus 276 ~~~~~~~f~a~s~e~~~~Wi~al~~a 301 (305)
.+.+.|+|+|+|++++++||.+|+.|
T Consensus 81 ~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 81 SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 77788999999999999999999875
No 48
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=99.75 E-value=7.2e-19 Score=150.79 Aligned_cols=76 Identities=36% Similarity=0.786 Sum_probs=65.7
Q ss_pred CCcccCcCCCCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCC-CccccccHhhHHHHHhcc
Q psy2207 65 SIPELNLGKVAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKK-FRNFRVCEECYHYLVQEF 143 (305)
Q Consensus 65 ~~~~~~~~~~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~-~~~~rvC~~C~~~~~~~~ 143 (305)
+.+.+..+..+|.|+++ ..|+.|..+|++++||||||+||.+||+.||.++.++|..+ .+++|||+.||..+....
T Consensus 148 ~~damf~~~~~p~W~~~---~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l~~~~ 224 (226)
T 3zyq_A 148 ESDAMFAAERAPDWVDA---EECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKA 224 (226)
T ss_dssp GGGGCCCCCCCCCCCCC---SBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHHCC--
T ss_pred hHHHhhhcccccccccC---CCCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHhhhhc
Confidence 34456677889999986 48999999999999999999999999999999999998654 689999999999987653
No 49
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.74 E-value=5.8e-18 Score=133.50 Aligned_cols=95 Identities=18% Similarity=0.324 Sum_probs=78.0
Q ss_pred CCceeeeeeec--c--CCCceEEEEEEECCEEEEEccCcc---CccceEEEecCeE---EEEccc-cCCcceeEEEEe--
Q psy2207 209 GSQHSGWLHKK--S--GRNWKRYWFVLKDQVMYKYKASED---IKALLSIPVLGYE---LEALNE-QDNFKYVFQLKH-- 275 (305)
Q Consensus 209 ~~~~~G~L~~~--~--~~~wkrrw~vL~~~~L~~y~~~~d---~~p~~~i~L~~~~---v~~~~~-~~~~~~~F~l~~-- 275 (305)
.++++|||+++ + .+.|++|||||+++.|+||+.+.+ ..|.|.|+|.++. |...+. ...++++|+|.+
T Consensus 4 ~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~ 83 (134)
T 2y7b_A 4 SVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANREFCARRNTFELITVR 83 (134)
T ss_dssp CCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEE
T ss_pred CceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccchhhccCCCEEEEEecC
Confidence 46799999998 4 578999999999999999997655 7899999999887 444332 135679999986
Q ss_pred CCc-----------------eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 276 QGQ-----------------DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 276 ~~~-----------------~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+.. +.|+|+|+|+++++.||.+|+.|+.
T Consensus 84 p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~ 128 (134)
T 2y7b_A 84 PQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLV 128 (134)
T ss_dssp ECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 221 4699999999999999999998864
No 50
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.74 E-value=3.5e-18 Score=133.20 Aligned_cols=96 Identities=18% Similarity=0.397 Sum_probs=78.1
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEEC-CEEEEEccCccCccceEEEecCeEEE---EccccCCcceeEEEEe---CCc
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKD-QVMYKYKASEDIKALLSIPVLGYELE---ALNEQDNFKYVFQLKH---QGQ 278 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~-~~L~~y~~~~d~~p~~~i~L~~~~v~---~~~~~~~~~~~F~l~~---~~~ 278 (305)
..++++|||+|++ .+.|++|||||++ +.|+||+++.+..+.+.|+|.++.+. .......++++|+|.+ +..
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~ 85 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTV 85 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEE
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCc
Confidence 3467999999998 7899999999995 69999999988888888888765542 1112235678999986 566
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+.|+|+|+|+++++.||.||+.|+.
T Consensus 86 ~~~~~~a~s~~e~~~Wi~al~~~~~ 110 (125)
T 1unq_A 86 IERTFHVETPEEREEWTTAIQTVAD 110 (125)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eeEEEEeCCHHHHHHHHHHHHHHHh
Confidence 7899999999999999999998763
No 51
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.1e-17 Score=134.69 Aligned_cols=95 Identities=25% Similarity=0.382 Sum_probs=82.8
Q ss_pred CCCceeeeeeecc--------CCCceEEEEEEECC-----EEEEEccCc-cCccceEEEecCeEEEEccccCCcceeEEE
Q psy2207 208 SGSQHSGWLHKKS--------GRNWKRYWFVLKDQ-----VMYKYKASE-DIKALLSIPVLGYELEALNEQDNFKYVFQL 273 (305)
Q Consensus 208 ~~~~~~G~L~~~~--------~~~wkrrw~vL~~~-----~L~~y~~~~-d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l 273 (305)
..++++|||++++ .+.|++|||||.+. .|+||+++. +..|.+.|+|.++.+..... ..++++|+|
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~-~~~~~~F~i 94 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNN-KVRRFAFEL 94 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCC-SSCTTEEEE
T ss_pred CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCC-CCCceEEEE
Confidence 4568999999986 25899999999986 999999987 78999999999988876543 467799999
Q ss_pred EeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 274 KHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 274 ~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.+.+.+.|+|+|+|++++..||.+|+.|+.
T Consensus 95 ~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 95 KMQDKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp ECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EeCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 987768899999999999999999998864
No 52
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=8.1e-18 Score=131.78 Aligned_cols=96 Identities=21% Similarity=0.410 Sum_probs=81.8
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEE--CCEEEEEccC-ccCccceEEEecCeEEEEcccc--------CCcceeEEEE
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLK--DQVMYKYKAS-EDIKALLSIPVLGYELEALNEQ--------DNFKYVFQLK 274 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~--~~~L~~y~~~-~d~~p~~~i~L~~~~v~~~~~~--------~~~~~~F~l~ 274 (305)
..++++|||++++ .+.|++|||||. +..|+||+.+ .+..|.+.|+|.++.|...... ..++++|+|.
T Consensus 16 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~ 95 (129)
T 1x1g_A 16 GTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVI 95 (129)
T ss_dssp SEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEEC
T ss_pred CCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEE
Confidence 4468999999998 789999999999 4799999997 7789999999998877654322 0157999999
Q ss_pred eCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 275 HQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 275 ~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+++.++|+|+|+|++++++||.+|+.|+.
T Consensus 96 ~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 96 TKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred cCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 87777899999999999999999999874
No 53
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.74 E-value=2.6e-17 Score=139.92 Aligned_cols=96 Identities=20% Similarity=0.430 Sum_probs=84.5
Q ss_pred CCCceeeeeeecc------CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccc---cCCcceeEEEEeCCc
Q psy2207 208 SGSQHSGWLHKKS------GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNE---QDNFKYVFQLKHQGQ 278 (305)
Q Consensus 208 ~~~~~~G~L~~~~------~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~---~~~~~~~F~l~~~~~ 278 (305)
..++++|||++++ .+.|++|||||+++.|+||+++.+..|.|.|+|.++.+...+. ...++++|+|.+++.
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~ 183 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDK 183 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSS
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCC
Confidence 4568999999998 2599999999999999999999999999999999999886432 335579999998777
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
++|+|+|+|+++++.||.+|+.|+.
T Consensus 184 r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 184 RIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999874
No 54
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=99.74 E-value=2.1e-18 Score=147.67 Aligned_cols=71 Identities=38% Similarity=0.872 Sum_probs=62.3
Q ss_pred ccCcCCCCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCC-CccccccHhhHHHHHh
Q psy2207 68 ELNLGKVAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKK-FRNFRVCEECYHYLVQ 141 (305)
Q Consensus 68 ~~~~~~~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~-~~~~rvC~~C~~~~~~ 141 (305)
.+..+..+|.|+++ ..|+.|+.+|++++||||||+||.+||+.||.++.++|..+ .+++|||+.||..+..
T Consensus 148 a~f~~~~~~~W~~~---~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~~~l~~ 219 (220)
T 1dvp_A 148 AMFTADTAPNWADG---RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQR 219 (220)
T ss_dssp -CCCCSCCCCCCCC---SBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHHHHHHH
T ss_pred ccccccccccCCCC---CccCCCCCccCCcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHHHHHhc
Confidence 44456779999986 58999999999999999999999999999999999998654 6899999999998753
No 55
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=99.74 E-value=1.3e-18 Score=126.29 Aligned_cols=62 Identities=24% Similarity=0.569 Sum_probs=57.6
Q ss_pred cCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHhc
Q psy2207 81 DSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQE 142 (305)
Q Consensus 81 d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~~ 142 (305)
+.++..|+.|..+|++++||||||+||.|||+.|+.++++|+..+.+++|||+.||..+...
T Consensus 6 ~~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~~ 67 (88)
T 1wfk_A 6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRG 67 (88)
T ss_dssp CCCCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHHC
T ss_pred CCcCCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHhc
Confidence 34577899999999999999999999999999999999999988889999999999999865
No 56
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.73 E-value=5.8e-18 Score=131.59 Aligned_cols=97 Identities=18% Similarity=0.387 Sum_probs=81.5
Q ss_pred CCCceeeeeeecc----------CCCceEEEEEEECCEEEEEccCccCcc--------ceEEEecCeEEEEccccCCcce
Q psy2207 208 SGSQHSGWLHKKS----------GRNWKRYWFVLKDQVMYKYKASEDIKA--------LLSIPVLGYELEALNEQDNFKY 269 (305)
Q Consensus 208 ~~~~~~G~L~~~~----------~~~wkrrw~vL~~~~L~~y~~~~d~~p--------~~~i~L~~~~v~~~~~~~~~~~ 269 (305)
.++.+.|||+++. .+.|+++||||+++.|+||+++.+..+ .+.|+|.++.+....+...++|
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~kr~~ 85 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDYTKKKH 85 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSSSSSTT
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCCCCCCe
Confidence 4567999998764 468999999999999999999886543 3678998888777655557789
Q ss_pred eEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 270 VFQLKHQGQDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 270 ~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
+|+|.+.+.+.|+|+|+|++++++||.+|+.|+..
T Consensus 86 ~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 86 VLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp EEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred EEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 99999777788999999999999999999988753
No 57
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.73 E-value=3.4e-17 Score=134.48 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=76.5
Q ss_pred CCceeeeeeecc-------CCCceEEEEEEECCEEEEEcc----CccCccceEEEecCeEEE-Ec---ccc-CCc-----
Q psy2207 209 GSQHSGWLHKKS-------GRNWKRYWFVLKDQVMYKYKA----SEDIKALLSIPVLGYELE-AL---NEQ-DNF----- 267 (305)
Q Consensus 209 ~~~~~G~L~~~~-------~~~wkrrw~vL~~~~L~~y~~----~~d~~p~~~i~L~~~~v~-~~---~~~-~~~----- 267 (305)
.++++|||.|++ .+.|++|||||++..|+||++ ..+..|.|.|+|.++.++ .. ++. ...
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 357999999976 257999999999999999998 577899999999987654 22 111 111
Q ss_pred ----------------ceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 268 ----------------KYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 268 ----------------~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+++|+|++++ ++|+|.|+|++++++||++|+.++.
T Consensus 82 ~~~~~~~~~~~i~~~~~~~F~I~t~~-rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 82 GEESSEMEQISIIERFPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp ------CCTTHHHHCCCEEEEEEETT-CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred cCcccccccccccccccccEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 1899999765 5799999999999999999998875
No 58
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.72 E-value=3.5e-17 Score=134.29 Aligned_cols=95 Identities=24% Similarity=0.511 Sum_probs=70.0
Q ss_pred CCceeeeee----------ecc--CCCceEEEEEEECCEEEEEccCcc--CccceEEEecC--eEEEEccccCCcceeEE
Q psy2207 209 GSQHSGWLH----------KKS--GRNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLG--YELEALNEQDNFKYVFQ 272 (305)
Q Consensus 209 ~~~~~G~L~----------~~~--~~~wkrrw~vL~~~~L~~y~~~~d--~~p~~~i~L~~--~~v~~~~~~~~~~~~F~ 272 (305)
++.++|||+ +++ .+.|++|||||+++.|+||+++.+ ..+.+.|+|.. +.+.+......++++|+
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~ 81 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSETKRKNVFR 81 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSSCSCSSEEE
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEeccccCCCCCEEE
Confidence 357999999 443 678999999999999999999865 67888888865 66655555556789999
Q ss_pred EEeCCceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 273 LKHQGQDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 273 l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
|.+.+ +.|+|+|+|++++++||.+|+.|+..
T Consensus 82 I~t~~-r~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 82 LTTSD-CECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp EECSS-CEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred EEeCC-ceEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 99766 68999999999999999999988653
No 59
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2.5e-17 Score=127.54 Aligned_cols=94 Identities=20% Similarity=0.409 Sum_probs=82.1
Q ss_pred Cceeeeeeecc-----CCCceEEEEEEECCEEEEEccCccC--ccceEEEecCeEEEEccccCCcceeEEEEeC---Cce
Q psy2207 210 SQHSGWLHKKS-----GRNWKRYWFVLKDQVMYKYKASEDI--KALLSIPVLGYELEALNEQDNFKYVFQLKHQ---GQD 279 (305)
Q Consensus 210 ~~~~G~L~~~~-----~~~wkrrw~vL~~~~L~~y~~~~d~--~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~---~~~ 279 (305)
+.+++||...+ .+.|++|||+|++..|+||++..+. .|.+.|+|.||+|.++......+|.|+|..+ +.+
T Consensus 9 pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r 88 (137)
T 2ys3_A 9 PELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMS 88 (137)
T ss_dssp CCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEE
T ss_pred cchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhccCCCceEEECCCCEEeccccccCCceEEEEEccCCCCce
Confidence 46889998876 5689999999999999999998886 8999999999999988655567788888754 558
Q ss_pred eEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 280 PLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 280 ~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.|+|.|+|++++.+||+||+.|+.
T Consensus 89 ~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 89 EIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHHhcc
Confidence 899999999999999999999975
No 60
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=8.2e-17 Score=123.49 Aligned_cols=90 Identities=23% Similarity=0.416 Sum_probs=75.3
Q ss_pred CCceeeeeeecc--C-CCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEc
Q psy2207 209 GSQHSGWLHKKS--G-RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 285 (305)
Q Consensus 209 ~~~~~G~L~~~~--~-~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a 285 (305)
.++++|||++++ . +.|++|||||+++.|+||+++.+ .+.+.|.|.++.|.+.+ ..+++|+|.. ..++|+|+|
T Consensus 9 ~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~-~~~~~i~l~~~~v~~~~---~~~~~F~I~~-~~r~~~l~a 83 (114)
T 2da0_A 9 GSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN-RQPAKLNLLTCQVKPNA---EDKKSFDLIS-HNRTYHFQA 83 (114)
T ss_dssp CSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC-SCCEEEETTTSEEEECS---SSSSCEEEEE-TTEEEEEEC
T ss_pred CccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC-CCCCEEEeeeeEEEECC---CCCCEEEEEc-CCcEEEEEc
Confidence 457999999998 3 89999999999999999999765 56677878777776432 3468999985 467899999
Q ss_pred CCHHHHHHHHHHHHHHHc
Q psy2207 286 DNEQSYERWMKAMREATT 303 (305)
Q Consensus 286 ~s~e~~~~Wi~al~~a~~ 303 (305)
+|+++++.||.+|+.|..
T Consensus 84 ~s~~e~~~Wi~al~~~~~ 101 (114)
T 2da0_A 84 EDEQDYVAWISVLTNSKE 101 (114)
T ss_dssp SSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999998763
No 61
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.71 E-value=9.7e-17 Score=131.14 Aligned_cols=96 Identities=24% Similarity=0.286 Sum_probs=77.0
Q ss_pred CCCCceeeeeeecc-------CCCceEEEEEEECCEEEEEccCcc-CccceEEEecCeEEE-Ecccc-----CCcceeEE
Q psy2207 207 DSGSQHSGWLHKKS-------GRNWKRYWFVLKDQVMYKYKASED-IKALLSIPVLGYELE-ALNEQ-----DNFKYVFQ 272 (305)
Q Consensus 207 ~~~~~~~G~L~~~~-------~~~wkrrw~vL~~~~L~~y~~~~d-~~p~~~i~L~~~~v~-~~~~~-----~~~~~~F~ 272 (305)
..+++++|||.|++ .+.|++|||||+++.|+||+++.+ ..+.|.|+|.++.++ ..... ....+.|+
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~ 91 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQ 91 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEE
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEE
Confidence 34578999999987 236999999999999999998765 457899999776544 22221 23568999
Q ss_pred EEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 273 LKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 273 l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|.++ .++|+|.|+|++++++||+||+++++
T Consensus 92 i~t~-~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 92 VVHD-ANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp EECS-SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EecC-CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9865 46799999999999999999999875
No 62
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.70 E-value=2e-17 Score=147.41 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=78.0
Q ss_pred CCCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEe---cCeEEEEcccc-----CCcceeEEEEeC
Q psy2207 207 DSGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPV---LGYELEALNEQ-----DNFKYVFQLKHQ 276 (305)
Q Consensus 207 ~~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L---~~~~v~~~~~~-----~~~~~~F~l~~~ 276 (305)
...+.++|||++++ .+.|++|||||+++.|+||+++.+..|.+.|+| .++.|...... ..++|+|.|.++
T Consensus 165 ~~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~ 244 (291)
T 3tca_A 165 IIVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHP 244 (291)
T ss_dssp CCCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECT
T ss_pred CCCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCCCCeEEEEEcC
Confidence 34567999999998 778999999999999999999999888888777 34555443221 245699999875
Q ss_pred C-----ceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 277 G-----QDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 277 ~-----~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
+ .++|+|+|+|++++..||.||+.|.
T Consensus 245 ~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 245 QIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp TCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 3 3569999999999999999998774
No 63
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.70 E-value=1.5e-16 Score=139.60 Aligned_cols=96 Identities=24% Similarity=0.479 Sum_probs=80.2
Q ss_pred CCCceeeeee--------ecc------CCCceEEEEEEECCEEEEEccC------ccCccceEEEecCeEEEEccccCCc
Q psy2207 208 SGSQHSGWLH--------KKS------GRNWKRYWFVLKDQVMYKYKAS------EDIKALLSIPVLGYELEALNEQDNF 267 (305)
Q Consensus 208 ~~~~~~G~L~--------~~~------~~~wkrrw~vL~~~~L~~y~~~------~d~~p~~~i~L~~~~v~~~~~~~~~ 267 (305)
..++++|||+ +.+ .+.|++|||||+++.|+||+++ .+..|.+.|+|.++.|....+...+
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~~kk 88 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEHPKK 88 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTCSSC
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcCCCC
Confidence 4468999999 343 3589999999999999999984 4678999999999988865555567
Q ss_pred ceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 268 KYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 268 ~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+++|+|.+.+.++|+|+|+|+++++.||.+|+.|+.
T Consensus 89 ~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~ 124 (263)
T 3a8p_A 89 EHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACA 124 (263)
T ss_dssp SSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 899999976778899999999999999999998764
No 64
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.68 E-value=2.3e-16 Score=123.55 Aligned_cols=94 Identities=13% Similarity=0.276 Sum_probs=69.7
Q ss_pred Cceeeeeeec-c---CCCceEEEEEEEC-CEEEEEccCcc---CccceEEEecCeEEEEcc-------------------
Q psy2207 210 SQHSGWLHKK-S---GRNWKRYWFVLKD-QVMYKYKASED---IKALLSIPVLGYELEALN------------------- 262 (305)
Q Consensus 210 ~~~~G~L~~~-~---~~~wkrrw~vL~~-~~L~~y~~~~d---~~p~~~i~L~~~~v~~~~------------------- 262 (305)
++++|||+|+ + .+.|++|||||.+ +.|+||++..+ ....+.|+|..+.+..+.
T Consensus 4 ~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~~ 83 (128)
T 2rlo_A 4 PIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAG 83 (128)
T ss_dssp EEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCCS
T ss_pred ceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccccc
Confidence 4799999999 4 4789999999996 78999976332 112234555444443221
Q ss_pred ccCCcceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 263 EQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 263 ~~~~~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
..+..+++|.|.+++.++|+|+|+|++++++||+||+.++.
T Consensus 84 ~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 84 QAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp SCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 01246789999987768899999999999999999998875
No 65
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=99.67 E-value=1.6e-17 Score=126.77 Aligned_cols=63 Identities=24% Similarity=0.522 Sum_probs=44.8
Q ss_pred CCCCeeeecCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHhc
Q psy2207 73 KVAPLWIPDSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQE 142 (305)
Q Consensus 73 ~~~p~w~~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~~ 142 (305)
...+.|.||+....|+.|+.+|++++||||||+||.+||+.||.++++ ++|||+.||..+...
T Consensus 8 ~~~~~~~Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~-------~vRVC~~C~~~~~~~ 70 (120)
T 1y02_A 8 GYSSFPSPTGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN-------GPRLCLLCQRFRATA 70 (120)
T ss_dssp ------------CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC-----------CCEEHHHHHHHHTT
T ss_pred CcccCCcCccccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCC-------CceECHHHHHHHhcc
Confidence 345678899999999999999999999999999999999999999875 399999999987653
No 66
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.66 E-value=6.3e-16 Score=141.04 Aligned_cols=94 Identities=23% Similarity=0.527 Sum_probs=82.9
Q ss_pred CCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCC---------
Q psy2207 209 GSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQG--------- 277 (305)
Q Consensus 209 ~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~--------- 277 (305)
++.++|||++++ .+.|++|||||+++.|+||+++.+..|.|.|+|.++.|...+. ..++++|+|.+++
T Consensus 212 ~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~~~-~~~~~~F~I~~~~~~~~~~~~~ 290 (347)
T 2r09_A 212 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVED-PRKPNCFELYNPSHKGQVIKAC 290 (347)
T ss_dssp CCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECC-SSCSSEEEEECSSSTTCCCCCE
T ss_pred ccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeEEEEccC-CCCCCEEEEEeCCccccccccc
Confidence 458999999998 6799999999999999999999999999999999998876543 4677999998653
Q ss_pred ------------ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 278 ------------QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 278 ------------~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.++|+|+|+|++++++||.+|+.|+.
T Consensus 291 k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 291 KTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp EECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 47899999999999999999998864
No 67
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.66 E-value=5.9e-16 Score=133.22 Aligned_cols=95 Identities=19% Similarity=0.417 Sum_probs=82.5
Q ss_pred CCCCCceeeeeeecc--C-----CCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCc
Q psy2207 206 NDSGSQHSGWLHKKS--G-----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ 278 (305)
Q Consensus 206 ~~~~~~~~G~L~~~~--~-----~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~ 278 (305)
..++++++|||++++ . +.|++|||||+++.|+||+++.+..|.+.|+|.++.+..... .++++|+|.+ ..
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~--~k~~~F~I~t-~~ 130 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNT--NKENGIDIIM-AD 130 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEET--TTTSEEEEEC-SS
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCC--CCCcEEEEEc-CC
Confidence 345678999999998 3 789999999999999999999999999999998887754432 4578999975 55
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
++|+|+|+|++++++|+++|+.++.
T Consensus 131 r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 131 RTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 7899999999999999999998875
No 68
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.65 E-value=1.5e-15 Score=120.22 Aligned_cols=93 Identities=24% Similarity=0.429 Sum_probs=81.2
Q ss_pred ceeeeeeecc-----CCCceEEEEEEECCEEEEEccCcc--CccceEEEecCeEEEEccccCCcceeEEEEeC---Ccee
Q psy2207 211 QHSGWLHKKS-----GRNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLGYELEALNEQDNFKYVFQLKHQ---GQDP 280 (305)
Q Consensus 211 ~~~G~L~~~~-----~~~wkrrw~vL~~~~L~~y~~~~d--~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~---~~~~ 280 (305)
.+++||.... .+.|+++|||+++..|+||+++++ ..|.+.|+|.||+|.++......+|.++|..+ +...
T Consensus 48 eL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e 127 (173)
T 4f7h_A 48 ELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNE 127 (173)
T ss_dssp CEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEE
T ss_pred hhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecCceEEeccccccccceeEEEeccCCCCcce
Confidence 5889997654 789999999999999999999888 67999999999999987655567777887654 6778
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 281 LVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 281 ~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
++++|++++++.+||.|++.|++
T Consensus 128 ~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 128 IWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHT
T ss_pred eeeecCCHHHHHHHHHHhhhhcc
Confidence 99999999999999999999875
No 69
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.64 E-value=8.7e-16 Score=134.67 Aligned_cols=93 Identities=19% Similarity=0.301 Sum_probs=77.1
Q ss_pred CCCCceeeeeeeccCCCceEEEEEEECC-------EEEEEccCcc-----CccceEEEecCeEEEEccccCCcceeEEEE
Q psy2207 207 DSGSQHSGWLHKKSGRNWKRYWFVLKDQ-------VMYKYKASED-----IKALLSIPVLGYELEALNEQDNFKYVFQLK 274 (305)
Q Consensus 207 ~~~~~~~G~L~~~~~~~wkrrw~vL~~~-------~L~~y~~~~d-----~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~ 274 (305)
...++++|||+|+ +.|++|||||++. .|+||+++.+ ..|.+.|+|.++..+........+++|.|.
T Consensus 7 ~~~v~k~G~L~K~--K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~ 84 (264)
T 1qqg_A 7 FSDVRKVGYLRKP--KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRADSKNKHLVALY 84 (264)
T ss_dssp --CEEEEEEEECT--TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEE
T ss_pred CCCccEEEEEEEC--CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEeccCCCCCcEEEEE
Confidence 3456899999987 7999999999987 9999999887 689999999887643222234567999999
Q ss_pred eCCceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 275 HQGQDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 275 ~~~~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
++ .++|+|.|+|+++++.||.+|+.+.
T Consensus 85 t~-~rty~l~A~se~e~~~Wi~aL~~~~ 111 (264)
T 1qqg_A 85 TR-DEHFAIAADSEAEQDSWYQALLQLH 111 (264)
T ss_dssp ES-SCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EC-CEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 65 6789999999999999999998764
No 70
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.63 E-value=3.5e-15 Score=116.91 Aligned_cols=94 Identities=24% Similarity=0.397 Sum_probs=80.0
Q ss_pred Cceeeeeeecc-----CCCceEEEEEEECCEEEEEccCcc--CccceEEEecCeEEEEccccCCcceeEEEEeC---Cce
Q psy2207 210 SQHSGWLHKKS-----GRNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLGYELEALNEQDNFKYVFQLKHQ---GQD 279 (305)
Q Consensus 210 ~~~~G~L~~~~-----~~~wkrrw~vL~~~~L~~y~~~~d--~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~---~~~ 279 (305)
+.+++||.... .+.||++|||+++..|+||+++++ ..|.+.|+|.||+|.++......+|.|+|..+ +..
T Consensus 26 PeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~ 105 (165)
T 4bbk_A 26 PKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMN 105 (165)
T ss_dssp CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEE
T ss_pred hhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCccEEecccccccceeeEEEecCCCCcce
Confidence 35889997755 789999999999999999999887 67999999999999987655567788888654 566
Q ss_pred eEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 280 PLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 280 ~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.++|+|+|+++..+||.|++.|++
T Consensus 106 e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 106 EVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHT
T ss_pred eeeeecCCHHHHHHHHHHhhhccc
Confidence 899999999999999999999875
No 71
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.62 E-value=2.4e-15 Score=139.30 Aligned_cols=95 Identities=14% Similarity=0.383 Sum_probs=79.8
Q ss_pred CCCCceeeeeeecc-C----CCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCc-ee
Q psy2207 207 DSGSQHSGWLHKKS-G----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ-DP 280 (305)
Q Consensus 207 ~~~~~~~G~L~~~~-~----~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~-~~ 280 (305)
...++++|||++++ . +.|++|||||+++.|+||+. .+..+.+.|+|.++.|...+. ..++|+|+|.++.+ ++
T Consensus 275 ~~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~~~~~~~i~l~~~~v~~~~~-~~r~~~F~i~t~~~~~~ 352 (385)
T 2q13_A 275 RNLTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GDVAGGLAMDIDNCSVMAVDC-EDRRYCFQITSFDGKKS 352 (385)
T ss_dssp CCCSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SCSSCEEEEECTTCEEEEECC-TTCSSEEEEECTTSCBC
T ss_pred CCCccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CCcCCCceEEccceEEEeccc-cCCCceEEEEeCCCCeE
Confidence 34578999999987 2 35999999999999999998 567788999999999876643 46679999997664 78
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 281 LVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 281 ~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|+|+|+++++.||.||+.++.
T Consensus 353 ~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 353 SILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp CCEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998764
No 72
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.58 E-value=2.5e-14 Score=112.87 Aligned_cols=95 Identities=21% Similarity=0.373 Sum_probs=77.8
Q ss_pred ceeeeeeecc--CCCceEEEEEEECCEEEEEccCc----------------------------------cCcc-------
Q psy2207 211 QHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASE----------------------------------DIKA------- 247 (305)
Q Consensus 211 ~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~----------------------------------d~~p------- 247 (305)
++.|||++++ .+.|.++||||.+..|||++... +..|
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l~E 81 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHLDE 81 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSSCT
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcccc
Confidence 5789999998 88999999999999999988111 0111
Q ss_pred --------ceEEEecCeEEEEccc-cCCcceeEEEEeCC--ceeEEEEcCCHHHHHHHHHHHHHHHcCC
Q psy2207 248 --------LLSIPVLGYELEALNE-QDNFKYVFQLKHQG--QDPLVFGADNEQSYERWMKAMREATTLS 305 (305)
Q Consensus 248 --------~~~i~L~~~~v~~~~~-~~~~~~~F~l~~~~--~~~~~f~a~s~e~~~~Wi~al~~a~~~s 305 (305)
.|.|+|.||.|...+. ...++|+|+|.+++ .+.|.|+|+|.++|..||++|+.|+.-+
T Consensus 82 ~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~a 150 (150)
T 2fjl_A 82 NSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQTA 150 (150)
T ss_dssp TTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhhC
Confidence 6999999999986553 34678999998753 4579999999999999999999998643
No 73
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.57 E-value=6.6e-15 Score=137.33 Aligned_cols=95 Identities=16% Similarity=0.362 Sum_probs=79.9
Q ss_pred CCCCceeeeeeecc-----CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCC-cee
Q psy2207 207 DSGSQHSGWLHKKS-----GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQG-QDP 280 (305)
Q Consensus 207 ~~~~~~~G~L~~~~-----~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~-~~~ 280 (305)
...+.+.|||+++. .+.|+||||||+++.|+||+... ..+.+.|+|.+|.|...+.. .++|+|+|.+++ .++
T Consensus 298 ~~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~-~~~~~~~~l~~~~v~~~~~~-~r~~cF~i~~~~~~~~ 375 (407)
T 4h8s_A 298 RNLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGA-VAGGLIQDLDNCSVMAVDCE-DRRYCFQITTPNGKSG 375 (407)
T ss_dssp CSCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTC-SSCCCCBCSSCCEEEEECCT-TCSSEEEEECTTSSCC
T ss_pred CCcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCC-CCCCeEEECCceEEEECCCC-CCCceEEEEecCCCce
Confidence 34467999999873 46799999999999999998654 46778899999999876543 567999999765 468
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 281 LVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 281 ~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|+|+|++++..||.||+.|+.
T Consensus 376 ~~l~A~s~~e~~~Wi~ai~~a~~ 398 (407)
T 4h8s_A 376 IILQAESRKENEEWICAINNISR 398 (407)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998875
No 74
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.53 E-value=1.2e-14 Score=127.32 Aligned_cols=96 Identities=24% Similarity=0.452 Sum_probs=80.4
Q ss_pred CCCceeeeeeecc--------------CCCceEEEEEEECCEEEEEccCcc------CccceEEEecCeEEEEccccCCc
Q psy2207 208 SGSQHSGWLHKKS--------------GRNWKRYWFVLKDQVMYKYKASED------IKALLSIPVLGYELEALNEQDNF 267 (305)
Q Consensus 208 ~~~~~~G~L~~~~--------------~~~wkrrw~vL~~~~L~~y~~~~d------~~p~~~i~L~~~~v~~~~~~~~~ 267 (305)
+.+.+.|||.++. .+.|+++||||++..|+||+++.. ..|.+.|+|.++.+....+...+
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d~~kK 88 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKK 88 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTTSSSS
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccccCCC
Confidence 4457999997542 368999999999999999998753 35788899999999866666677
Q ss_pred ceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 268 KYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 268 ~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
+++|+|.+.+...|+|+|++.++|+.|+.+|..|+.
T Consensus 89 k~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 89 DFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp CSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 899999988888999999999999999999987764
No 75
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.49 E-value=1.3e-13 Score=105.90 Aligned_cols=93 Identities=12% Similarity=0.410 Sum_probs=72.6
Q ss_pred ceeeeeee--cc--CC-CceEEEEEEECCEEEEEccCccC---ccceEEEecCe-EEEEccc-------cCCcceeEEEE
Q psy2207 211 QHSGWLHK--KS--GR-NWKRYWFVLKDQVMYKYKASEDI---KALLSIPVLGY-ELEALNE-------QDNFKYVFQLK 274 (305)
Q Consensus 211 ~~~G~L~~--~~--~~-~wkrrw~vL~~~~L~~y~~~~d~---~p~~~i~L~~~-~v~~~~~-------~~~~~~~F~l~ 274 (305)
.++|||.+ ++ .+ .|++|||||.+..|+||+.+.+. .|.+.|+|... .|....+ ....++.|+|.
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~ 81 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQIL 81 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEE
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEE
Confidence 37899986 43 56 89999999999999999987654 78999999543 3333222 12356899998
Q ss_pred eC-----CceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 275 HQ-----GQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 275 ~~-----~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.. ..++++|.|+|++++++|+.+|++++.
T Consensus 82 ~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 82 YANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp ECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred eCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 63 357899999999999999999998764
No 76
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=99.48 E-value=5.7e-14 Score=130.94 Aligned_cols=92 Identities=12% Similarity=0.283 Sum_probs=79.2
Q ss_pred CCCceEEEEE--eceEEEEEeCCHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCcccCcCCCCCeeeecCCCccc
Q psy2207 10 DYNNEFSVIA--ISRSFTLRARSANERLEWIDAIQTAIKENEQHLLSFLNRRSLTQSSIPELNLGKVAPLWIPDSRVSMC 87 (305)
Q Consensus 10 ~~~~~f~i~~--~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~d~~~~~C 87 (305)
..+|.|.|.. +.++|.|+|+|++||+.|+++|++++.+...... ......+.|.++...+.|
T Consensus 297 ~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~~----------------~~~~h~f~~~~~~~~t~C 360 (406)
T 2vrw_B 297 KWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPENA----------------TANGHDFQMFSFEETTSC 360 (406)
T ss_dssp TTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHSCTTT----------------TGGGCCEEEECCSSCCBC
T ss_pred ccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhhhccc----------------cCCCCCCccccCCCCCCC
Confidence 4679999997 5789999999999999999999999987543211 123457899999999999
Q ss_pred cccccccc-ccccccccccccceeccCccCC
Q psy2207 88 QRCTSVFT-VTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 88 ~~C~~~f~-~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
+.|+..|. +++++|||+.||.++|+.|+..
T Consensus 361 ~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 361 KACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp TTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred ccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 99999994 8999999999999999999974
No 77
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.35 E-value=8.6e-12 Score=108.10 Aligned_cols=95 Identities=19% Similarity=0.287 Sum_probs=75.5
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceE---EEecCeEEEEcccc-----CCcceeEEEEeCC
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLS---IPVLGYELEALNEQ-----DNFKYVFQLKHQG 277 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~---i~L~~~~v~~~~~~-----~~~~~~F~l~~~~ 277 (305)
..+.+.|||++++ .+.|++|||+|+++.||||+......+... ++|.++.|...... .-.+++|.|.+..
T Consensus 130 ~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k 209 (256)
T 3hk0_A 130 SSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNK 209 (256)
T ss_dssp SCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETT
T ss_pred CCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEccc
Confidence 3457999999987 789999999999999999997765555444 68899888765422 1236999998643
Q ss_pred c-----eeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 278 Q-----DPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 278 ~-----~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
. ..++|+|+|++++..|+.||+.|.
T Consensus 210 ~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 210 VRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp CSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 2 269999999999999999998773
No 78
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=2.4e-11 Score=92.17 Aligned_cols=96 Identities=16% Similarity=0.211 Sum_probs=73.2
Q ss_pred ccCCCCCceeeeeeecc----CCCceEEEEEEEC------CEEEEEccCccC----ccceEEEecCeEEE-Ecccc---C
Q psy2207 204 TANDSGSQHSGWLHKKS----GRNWKRYWFVLKD------QVMYKYKASEDI----KALLSIPVLGYELE-ALNEQ---D 265 (305)
Q Consensus 204 ~~~~~~~~~~G~L~~~~----~~~wkrrw~vL~~------~~L~~y~~~~d~----~p~~~i~L~~~~v~-~~~~~---~ 265 (305)
+...+++++.|||+.+. ++.|+|+||||.+ ..|-+|.+++.. .+..+|.|..|.-+ +...+ .
T Consensus 6 ~~m~e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~p 85 (127)
T 2d9w_A 6 SGMGDGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSP 85 (127)
T ss_dssp CCSCCCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSC
T ss_pred ccccCccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCC
Confidence 34566778999999886 5679999999963 589999987652 57889999876554 43332 2
Q ss_pred CcceeEEEEeCCceeEEEEcCCHHHHHHHHHHHHHH
Q psy2207 266 NFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREA 301 (305)
Q Consensus 266 ~~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a 301 (305)
...+.|.|.+++ ++|.|+|++. ++..||.+|-+.
T Consensus 86 k~~~aF~l~T~e-r~~~laAe~~-E~~~Wi~~ic~~ 119 (127)
T 2d9w_A 86 RDTSAFFLETKE-RLYLLAAPAA-ERGDWVQAICLL 119 (127)
T ss_dssp SSCEEEEEEESS-CEEEEEECHH-HHHHHHHHHHHH
T ss_pred CcceEEEEEeCC-cEEEEEeCcH-HHHHHHHHHHHH
Confidence 445899998554 6899999965 899999999654
No 79
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.31 E-value=9.9e-12 Score=108.97 Aligned_cols=95 Identities=18% Similarity=0.312 Sum_probs=70.0
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCcc---ceEEEecCeEEEEccc-----cCCcceeEEEEeCC
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKA---LLSIPVLGYELEALNE-----QDNFKYVFQLKHQG 277 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p---~~~i~L~~~~v~~~~~-----~~~~~~~F~l~~~~ 277 (305)
..+.+.|||++++ .+.|++|||+|+++.||||....+..+ .+.++|.++.|..... ..-.+|+|.|.++.
T Consensus 156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~ 235 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQ 235 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTT
T ss_pred CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCCCCcEEEEecCc
Confidence 4457999999987 789999999999999999887655444 4556888888875432 12346999999642
Q ss_pred -----ceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 278 -----QDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 278 -----~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
...|+|+|+|++++..||.||+.|.
T Consensus 236 ~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 236 IQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp CCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 3479999999999999999998763
No 80
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.23 E-value=1.2e-11 Score=116.21 Aligned_cols=92 Identities=20% Similarity=0.423 Sum_probs=69.5
Q ss_pred CCceeeeeeecc--CCCceEEEEEEE-CCEEEEEccCccCccceEEEecCeEE-----EEccccCCcceeEEEEeCCcee
Q psy2207 209 GSQHSGWLHKKS--GRNWKRYWFVLK-DQVMYKYKASEDIKALLSIPVLGYEL-----EALNEQDNFKYVFQLKHQGQDP 280 (305)
Q Consensus 209 ~~~~~G~L~~~~--~~~wkrrw~vL~-~~~L~~y~~~~d~~p~~~i~L~~~~v-----~~~~~~~~~~~~F~l~~~~~~~ 280 (305)
.++++|||.|++ .+.|++|||||+ ++.|+||+.+.+..+.+.|+|.++.+ ...+ ..++++|.|.......
T Consensus 5 ~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~--~~~~~~f~I~~~~~~~ 82 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTE--RPRPNTFIIRCLQWTT 82 (446)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEEC--SSSTTEEEEEEEETTE
T ss_pred eEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCC--CCCCceeEEEcCCCce
Confidence 467899999998 789999999997 89999999999988889999976443 2222 3456899998655554
Q ss_pred E---EEEcCCHHHHHHHHHHHHHHH
Q psy2207 281 L---VFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 281 ~---~f~a~s~e~~~~Wi~al~~a~ 302 (305)
+ .|.+++.++++.|+.||+.++
T Consensus 83 ~~~r~~~~~~~ee~e~W~~ai~~~i 107 (446)
T 4ejn_A 83 VIERTFHVETPEEREEWTTAIQTVA 107 (446)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred eeeeEEecCCHHHHHHHHHHHHhhh
Confidence 4 799999999999999999874
No 81
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=99.19 E-value=2.3e-11 Score=118.51 Aligned_cols=94 Identities=12% Similarity=0.291 Sum_probs=78.0
Q ss_pred CcCCCceEEEEEec--eEEEEEeCCHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCcccCcCCCCCeeeecCCCc
Q psy2207 8 TEDYNNEFSVIAIS--RSFTLRARSANERLEWIDAIQTAIKENEQHLLSFLNRRSLTQSSIPELNLGKVAPLWIPDSRVS 85 (305)
Q Consensus 8 ~~~~~~~f~i~~~~--ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~d~~~~ 85 (305)
+..++|+|.|.+.. ++|.|+|.|++||+.|+++|+++|........ ........|.+....+
T Consensus 467 ~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~~~~~----------------~~~~H~F~~~~~~~~t 530 (587)
T 3ky9_A 467 NKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIYPENA----------------TANGHDFQMFSFEETT 530 (587)
T ss_dssp CCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHSCTTT----------------TGGGCCEEEECCSSCC
T ss_pred cccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhccccc----------------cccCCceeEEeCCCCc
Confidence 34588999999976 89999999999999999999999987543211 1234566788889999
Q ss_pred ccccccccc-cccccccccccccceeccCccCC
Q psy2207 86 MCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 86 ~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
.|+.|+..| +++.+.|||+.||.++|.+|+..
T Consensus 531 ~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 531 SCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp BCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred ccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 999999988 78999999999999999999986
No 82
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.12 E-value=2.4e-10 Score=90.04 Aligned_cols=91 Identities=15% Similarity=0.129 Sum_probs=75.0
Q ss_pred CCCCCceeeeeeeccCCCceEEEEEEECCEEEEEccCccCccceEEEecC-eEEEEccccCCcceeEEEEeCCceeEEEE
Q psy2207 206 NDSGSQHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLG-YELEALNEQDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 206 ~~~~~~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~-~~v~~~~~~~~~~~~F~l~~~~~~~~~f~ 284 (305)
..+.+++.|||.++.+-.|++|||+|++...+||-++......|.|+|.. +.|..... ..|.|..++ ++|+|.
T Consensus 48 ~ge~Ilk~G~v~KrkGl~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~l~ve~k~~-----~~F~I~Tp~-RtY~~~ 121 (151)
T 1w1g_A 48 ENNLILKMGPVDKRKGLFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNF-----KTFFVHTPN-RTYYLM 121 (151)
T ss_dssp TTCCEEEEEEEEEEETTEEEEEEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEESSS-----SEEEEEETT-EEEEEE
T ss_pred CCCcEEEEEEEEecccCcceeEEEEEcCCceEEEEcCccccccceEecCCCeeEEEcCC-----CEEEEECCC-ceEEEE
Confidence 45668999999996545599999999998888999998888999999954 55655432 289998776 889999
Q ss_pred cCCHHHHHHHHHHHHHHHc
Q psy2207 285 ADNEQSYERWMKAMREATT 303 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~~ 303 (305)
+. ...+++|++||+.+..
T Consensus 122 d~-~~~AqeWv~aI~~~~~ 139 (151)
T 1w1g_A 122 DP-SGNAHKWCRKIQEVWR 139 (151)
T ss_dssp CT-TSCHHHHHHHHHHHHH
T ss_pred cC-ccCHHHHHHHHHHHHH
Confidence 87 8899999999998865
No 83
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.92 E-value=1.7e-08 Score=76.40 Aligned_cols=95 Identities=17% Similarity=0.283 Sum_probs=75.3
Q ss_pred CCCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEE-Eccc-----cCCcceeEEEEeCCce
Q psy2207 208 SGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELE-ALNE-----QDNFKYVFQLKHQGQD 279 (305)
Q Consensus 208 ~~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~-~~~~-----~~~~~~~F~l~~~~~~ 279 (305)
..++.+||+-+.. ...|||+|+.|....+.+|+++.+..+...|+|..+..+ .... ....+|+|+|.+ ...
T Consensus 6 s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T-~~~ 84 (125)
T 2coa_A 6 SGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVT-ANA 84 (125)
T ss_dssp CSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEEC-SSC
T ss_pred CceeecceEEEEccCCccccceeeEecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEe-CCe
Confidence 3458999997776 678999999999999999999999999999999765444 3321 123569999985 556
Q ss_pred eEEEEcC-----------CHHHHHHHHHHHHHHHc
Q psy2207 280 PLVFGAD-----------NEQSYERWMKAMREATT 303 (305)
Q Consensus 280 ~~~f~a~-----------s~e~~~~Wi~al~~a~~ 303 (305)
+|+.+++ ..+.++.|..||+.|.+
T Consensus 85 ~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 85 TYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM 119 (125)
T ss_dssp CCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred EEEEccCCCCCCCCcCccccHHHHHHHHHHHhhcc
Confidence 7888763 13779999999999975
No 84
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=4.7e-08 Score=74.26 Aligned_cols=94 Identities=19% Similarity=0.292 Sum_probs=74.9
Q ss_pred CCceeeeeeecc--CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccc------cCCcceeEEEEeCCcee
Q psy2207 209 GSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNE------QDNFKYVFQLKHQGQDP 280 (305)
Q Consensus 209 ~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~------~~~~~~~F~l~~~~~~~ 280 (305)
.++.+||+-+.. ...|+|+|+.|....+.+|+++.+..+...|+|..+..+.... ....+|+|+|.+ ...+
T Consensus 7 ~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T-~~~~ 85 (129)
T 2d9z_A 7 GMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIIT-DTMV 85 (129)
T ss_dssp TSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEEC-SSCE
T ss_pred ceeecceEEEEccCCccccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEE-CCEE
Confidence 457899987666 6689999999999999999999999999999998765553321 123459999985 5567
Q ss_pred EEEEcCC---------------HHHHHHHHHHHHHHHc
Q psy2207 281 LVFGADN---------------EQSYERWMKAMREATT 303 (305)
Q Consensus 281 ~~f~a~s---------------~e~~~~Wi~al~~a~~ 303 (305)
|+.+++. .+.++.|..||+.|.+
T Consensus 86 y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 86 YFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp EEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 8877643 7999999999999975
No 85
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.54 E-value=3e-07 Score=78.64 Aligned_cols=38 Identities=21% Similarity=0.446 Sum_probs=35.2
Q ss_pred cCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 9 ~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
...+++|.|.++.|+|.|+|+|++|+++|+++|+.++.
T Consensus 118 ~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 118 TNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp TTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999999885
No 86
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.42 E-value=1.7e-06 Score=65.85 Aligned_cols=82 Identities=13% Similarity=0.285 Sum_probs=65.4
Q ss_pred CCCceEEEEEEE-----C-CEEEEEccCccCccceEEEecCe-EEEE--ccccCCcceeEEEEeCCceeEEEEcCCHHHH
Q psy2207 221 GRNWKRYWFVLK-----D-QVMYKYKASEDIKALLSIPVLGY-ELEA--LNEQDNFKYVFQLKHQGQDPLVFGADNEQSY 291 (305)
Q Consensus 221 ~~~wkrrw~vL~-----~-~~L~~y~~~~d~~p~~~i~L~~~-~v~~--~~~~~~~~~~F~l~~~~~~~~~f~a~s~e~~ 291 (305)
...|.+.|++|+ + ..|-||..++..+|...|++..+ .|.. .-+-.+..++|.|...+...|+|.|.++.++
T Consensus 39 ~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~ 118 (136)
T 1v5m_A 39 TAQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQK 118 (136)
T ss_dssp SCCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHH
T ss_pred ccchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHH
Confidence 458999999995 2 58999999999999999999654 2221 1122456789999988877899999999999
Q ss_pred HHHHHHHHHHH
Q psy2207 292 ERWMKAMREAT 302 (305)
Q Consensus 292 ~~Wi~al~~a~ 302 (305)
+.|+..|+...
T Consensus 119 ~sWla~Ir~C~ 129 (136)
T 1v5m_A 119 HSWVADIQGCV 129 (136)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhc
Confidence 99999998654
No 87
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.40 E-value=6e-07 Score=68.00 Aligned_cols=46 Identities=13% Similarity=0.354 Sum_probs=42.0
Q ss_pred cCCCcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 5 LPQTEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 5 ~~~~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
.++++.++|+|.|.+.+++|.++|+|++||.+|+++|++|+.+...
T Consensus 66 ~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~ 111 (113)
T 1zc3_B 66 VKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSD 111 (113)
T ss_dssp ECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHHhh
Confidence 4777889999999999999999999999999999999999977543
No 88
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.36 E-value=5.5e-07 Score=69.71 Aligned_cols=40 Identities=28% Similarity=0.496 Sum_probs=36.8
Q ss_pred CCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 10 ~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
+.+++|.|.+++ |+|.|+|+|++|+++||++|+.+|....
T Consensus 87 ~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~l 127 (128)
T 2rlo_A 87 EENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASL 127 (128)
T ss_dssp CCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHc
Confidence 567999999998 9999999999999999999999998654
No 89
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.35 E-value=1.5e-06 Score=67.34 Aligned_cols=97 Identities=16% Similarity=0.301 Sum_probs=68.2
Q ss_pred CCceeeeeeecc--CCCceEEEEEEECCEEEEEcc-Cc--cCccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEE
Q psy2207 209 GSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKA-SE--DIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVF 283 (305)
Q Consensus 209 ~~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~-~~--d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f 283 (305)
++++.+-+..+. .+.-+.|+++|=++.|.|.+. .. ...-.|.+||.+..|...++....+|+|+|.......+.|
T Consensus 27 ~ii~~s~v~~~~~~~~~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v 106 (132)
T 1v61_A 27 NVIFMSQVVMQHGACEEKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVV 106 (132)
T ss_dssp CCSCEEEEEBCCSSSSCCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEE
T ss_pred CeEEEeeEEEEEcccCcceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEeccccccCccEEEEecCCCceEEE
Confidence 344555544443 233356667775655555543 32 2345689999999887655545678999999665467999
Q ss_pred EcCCHHHHHHHHHHHHHHHcCC
Q psy2207 284 GADNEQSYERWMKAMREATTLS 305 (305)
Q Consensus 284 ~a~s~e~~~~Wi~al~~a~~~s 305 (305)
.|.|.+|+++||++|++++..+
T Consensus 107 ~~~s~eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 107 HCNNNQDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp CCCCSHHHHHHHHHHHHHHTTS
T ss_pred EeCCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999998754
No 90
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=98.33 E-value=1e-06 Score=68.59 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=45.6
Q ss_pred CeeecCCCcCCCceEEEEEe------ceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 1 MKVCLPQTEDYNNEFSVIAI------SRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 1 m~v~~~~~~~~~~~f~i~~~------~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
|+|....++.++|+|.|.+. ++++.|.|+|++||..|+++|+++|++..+
T Consensus 71 m~V~~~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~e 126 (140)
T 3qwm_A 71 MQVLLFENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQE 126 (140)
T ss_dssp EEEEEECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEcccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999985 378999999999999999999999988543
No 91
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=98.32 E-value=7.5e-06 Score=68.17 Aligned_cols=92 Identities=18% Similarity=0.351 Sum_probs=69.3
Q ss_pred CCceeeeeeeccCCCceEEEEEEEC------C-EEEEEccCcc----CccceEEEecCeEEE-EccccCCcceeEEEEeC
Q psy2207 209 GSQHSGWLHKKSGRNWKRYWFVLKD------Q-VMYKYKASED----IKALLSIPVLGYELE-ALNEQDNFKYVFQLKHQ 276 (305)
Q Consensus 209 ~~~~~G~L~~~~~~~wkrrw~vL~~------~-~L~~y~~~~d----~~p~~~i~L~~~~v~-~~~~~~~~~~~F~l~~~ 276 (305)
.++++|++..+.++.|+.||+||+. . .|..|++..| ..+..+|.|..+.-. ..-..++..+++.|+..
T Consensus 8 ~~v~eg~vk~r~~KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~ 87 (224)
T 3ml4_A 8 AALVEGQVKLRDGKKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGLRERSSLTLEDICGLEPALPYEGLAHTLAIICL 87 (224)
T ss_dssp CCSEEEEEEEC---CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEEES
T ss_pred ceeEEEeeeeecCCceeeEEEEEEcCCCchheEEEEEEcChhhhhcCCcccceeehHHhcCccccccccCcccEEEEEec
Confidence 3578999988888899999999962 2 7899998776 456788999654333 22233566789999977
Q ss_pred CceeEEEEcCCHHHHHHHHHHHHHH
Q psy2207 277 GQDPLVFGADNEQSYERWMKAMREA 301 (305)
Q Consensus 277 ~~~~~~f~a~s~e~~~~Wi~al~~a 301 (305)
.. ++.|+.|+.+.+..|-..|+..
T Consensus 88 d~-~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 88 SQ-AVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp SC-EEEEECSSHHHHHHHHHHHHHH
T ss_pred Cc-EEEEEeCCHHHHHHHHHHHhhc
Confidence 66 5799999999999999988753
No 92
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.32 E-value=6.7e-07 Score=72.43 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=36.6
Q ss_pred CCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 10 ~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
+.++.|+|.++.|+|.|+|+|++|+++||++|+++|....
T Consensus 85 ~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~ 124 (164)
T 2lul_A 85 QNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNN 124 (164)
T ss_dssp SSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCS
T ss_pred ccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHCh
Confidence 4578999999999999999999999999999999997643
No 93
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=1.5e-06 Score=65.74 Aligned_cols=44 Identities=16% Similarity=0.428 Sum_probs=39.3
Q ss_pred cCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHHhcc
Q psy2207 9 EDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENEQHL 52 (305)
Q Consensus 9 ~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~~ 52 (305)
++.+++|.|.++.|+|.|+|+|++|+++||++|+.++....+..
T Consensus 64 ~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 107 (114)
T 2da0_A 64 AEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMA 107 (114)
T ss_dssp SSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 34578999999999999999999999999999999998876543
No 94
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.20 E-value=2e-06 Score=64.17 Aligned_cols=44 Identities=18% Similarity=0.251 Sum_probs=37.9
Q ss_pred eecCCCcCCCceEEEEEe-ceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 3 VCLPQTEDYNNEFSVIAI-SRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 3 v~~~~~~~~~~~f~i~~~-~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
|....+.+.+++|.|.++ .|+|.|+|+|++|+++||++|+.++.
T Consensus 57 v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 57 VVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp EECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred EEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 444445677899999999 99999999999999999999998764
No 95
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=98.20 E-value=7.6e-07 Score=64.81 Aligned_cols=38 Identities=26% Similarity=0.445 Sum_probs=34.4
Q ss_pred CcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHH
Q psy2207 8 TEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAI 45 (305)
Q Consensus 8 ~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai 45 (305)
.+..++.|.|.++.|+|.|.|+|++|+++||++||+|.
T Consensus 56 ~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 56 HDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp CSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred CcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 44567899999999999999999999999999999873
No 96
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.16 E-value=5.8e-06 Score=65.50 Aligned_cols=44 Identities=23% Similarity=0.282 Sum_probs=38.6
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
.....+++|.|.+++ |+|.|+|+|++|+++||.+|+.++....+
T Consensus 84 ~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~ 128 (150)
T 1wg7_A 84 NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFE 128 (150)
T ss_dssp CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhhH
Confidence 345678999999996 99999999999999999999999976544
No 97
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.14 E-value=3.6e-06 Score=64.59 Aligned_cols=46 Identities=24% Similarity=0.351 Sum_probs=40.1
Q ss_pred eecCCCcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 3 VCLPQTEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 3 v~~~~~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
|....+...+|+|.|.++.|+|.|.|+|++|+++|+++|+.+|...
T Consensus 69 v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 114 (126)
T 1fao_A 69 VQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQI 114 (126)
T ss_dssp EEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred EEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 3344456778999999999999999999999999999999999873
No 98
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.12 E-value=3.8e-06 Score=64.31 Aligned_cols=41 Identities=15% Similarity=0.350 Sum_probs=37.1
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
+..+.+|+|.|.++. |+|.|+|+|++|+++||++|+.++..
T Consensus 77 ~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 77 DYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp TCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 346779999999887 99999999999999999999999875
No 99
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.11 E-value=4e-06 Score=65.01 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=34.9
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+....++.|.|.+++ |+|.|+|+|++|+++||++|+.++.
T Consensus 74 ~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 74 EGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp SSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 344567899999955 9999999999999999999999875
No 100
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.11 E-value=5.4e-06 Score=62.37 Aligned_cols=43 Identities=23% Similarity=0.428 Sum_probs=38.7
Q ss_pred CcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 8 TEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 8 ~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
.+..++.|.|.++.|+|.|+|+|++|+++|+++|+.++.....
T Consensus 65 ~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 65 KDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp CTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 4556789999999999999999999999999999999987654
No 101
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=98.10 E-value=5e-06 Score=64.40 Aligned_cols=42 Identities=21% Similarity=0.354 Sum_probs=37.3
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
+..+.+|.|.|.+++ +.|.|+|+|++|+++||++|+.+|...
T Consensus 84 ~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 84 HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp TSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 455678999999986 689999999999999999999999864
No 102
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.09 E-value=4.1e-06 Score=62.09 Aligned_cols=42 Identities=21% Similarity=0.447 Sum_probs=37.5
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
.+...+++|.|.+++ |+|.|+|+|++|+++|+++|+.+|.+.
T Consensus 65 ~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 65 RDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp SSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 344567999999998 999999999999999999999999763
No 103
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.06 E-value=3.4e-06 Score=64.32 Aligned_cols=43 Identities=28% Similarity=0.550 Sum_probs=38.1
Q ss_pred cCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHHHhc
Q psy2207 9 EDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKENEQH 51 (305)
Q Consensus 9 ~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~ 51 (305)
++.++.|.|.+++ |+|.|.|+|++|+++||++|+.++......
T Consensus 66 ~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (120)
T 2d9x_A 66 DEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEA 109 (120)
T ss_dssp SSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhh
Confidence 3557999999997 999999999999999999999999876543
No 104
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.05 E-value=5.9e-06 Score=61.97 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=32.7
Q ss_pred CCceEEEEEe-ceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAI-SRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 11 ~~~~f~i~~~-~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
.+++|.|.++ .|+|.|+|+|++|+++||++|++|+.
T Consensus 75 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 75 KDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp GGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 3689999986 89999999999999999999998863
No 105
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.04 E-value=6.2e-06 Score=62.20 Aligned_cols=42 Identities=29% Similarity=0.445 Sum_probs=36.8
Q ss_pred CCCcCCCceEEEEEe-ceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 6 PQTEDYNNEFSVIAI-SRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 6 ~~~~~~~~~f~i~~~-~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
.++.+.+|+|+|.++ .++|.|+|+|++|+++||++|+.++..
T Consensus 60 ~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 60 ANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp CCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 456677899999965 779999999999999999999988864
No 106
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.03 E-value=4.1e-06 Score=68.09 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=33.5
Q ss_pred ceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 13 NEFSVIAISRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 13 ~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
+.|+|++++|+|+|+|+|++|+++||++|+.+|..
T Consensus 99 ~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~~ 133 (169)
T 1btk_A 99 YPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIRY 133 (169)
T ss_dssp EEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHTT
T ss_pred ccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999864
No 107
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.02 E-value=1.1e-05 Score=60.51 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=38.4
Q ss_pred CCCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 6 PQTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 6 ~~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
.+....+|+|.|.+++ |+|.|+|+|++|+++||++|+.++....
T Consensus 60 ~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 60 QDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp CSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 3445678899999987 9999999999999999999999998643
No 108
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.02 E-value=1.2e-05 Score=60.77 Aligned_cols=38 Identities=24% Similarity=0.376 Sum_probs=34.6
Q ss_pred cCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 9 ~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
.+.+++|+|..+.++|.|.|+|++++++||++|+.|+.
T Consensus 69 ~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 69 LDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp CSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 34689999999999999999999999999999998764
No 109
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.02 E-value=8.3e-05 Score=56.08 Aligned_cols=91 Identities=15% Similarity=0.217 Sum_probs=62.0
Q ss_pred ceeeeeeeccC---CCceEEEEEE-ECCEEEEEccCcc---CccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEE
Q psy2207 211 QHSGWLHKKSG---RNWKRYWFVL-KDQVMYKYKASED---IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVF 283 (305)
Q Consensus 211 ~~~G~L~~~~~---~~wkrrw~vL-~~~~L~~y~~~~d---~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f 283 (305)
+..|.|.+... +.-+++++.| .|..|+....... ..-...++|.+..|.-.++....++.|.|... ...+.|
T Consensus 9 v~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~-~~s~~~ 87 (113)
T 1zc3_B 9 VYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNPPMKDMFKLLMF-PESRIF 87 (113)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBTTBSSEEEEEET-TEEEEE
T ss_pred EEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCcccceEEEEEeC-CceEEE
Confidence 56788776652 2234455555 4544444442222 23344678888888755555567899999854 457999
Q ss_pred EcCCHHHHHHHHHHHHHHH
Q psy2207 284 GADNEQSYERWMKAMREAT 302 (305)
Q Consensus 284 ~a~s~e~~~~Wi~al~~a~ 302 (305)
+|+|.++..+|+.+|++|.
T Consensus 88 ~aes~~eK~~Wl~~~~~a~ 106 (113)
T 1zc3_B 88 QAENAKIKREWLEVLEETK 106 (113)
T ss_dssp ECSSHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999886
No 110
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.01 E-value=5.6e-06 Score=63.93 Aligned_cols=39 Identities=23% Similarity=0.422 Sum_probs=34.8
Q ss_pred CcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 8 TEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 8 ~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
..+.+++|.|.++.|+|.|+|+|++|+++||++|+.++.
T Consensus 82 ~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 82 KPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp SCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999998764
No 111
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.01 E-value=9.8e-06 Score=62.07 Aligned_cols=38 Identities=16% Similarity=0.331 Sum_probs=35.3
Q ss_pred cCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 9 ~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
...++.|+|+++.++|.|+|+|++|+++||++|+.|+.
T Consensus 73 ~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 73 EGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp CSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 45779999999999999999999999999999999885
No 112
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.99 E-value=7.4e-06 Score=62.35 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=38.1
Q ss_pred cCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 9 EDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 9 ~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
+..++.|.|.++.|+|.|.|+|++|+++||++|+.++.+...
T Consensus 67 ~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (119)
T 2dhk_A 67 DAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHN 108 (119)
T ss_dssp TGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 455789999999999999999999999999999999987654
No 113
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=97.98 E-value=6.4e-06 Score=60.99 Aligned_cols=38 Identities=21% Similarity=0.397 Sum_probs=33.7
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTA 44 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~a 44 (305)
+....+|+|.|.+++ |+|.|+|+|++|+++||++|+.|
T Consensus 68 ~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 68 DYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp SCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred cccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 445678999999876 99999999999999999999864
No 114
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.96 E-value=5.6e-06 Score=62.49 Aligned_cols=39 Identities=26% Similarity=0.456 Sum_probs=35.1
Q ss_pred CcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 8 TEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 8 ~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
....++.|.|.++.|+|.|.|+|++|+++||++|+.+|.
T Consensus 73 ~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 73 TVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp SSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred cCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 345568999999999999999999999999999998774
No 115
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=97.93 E-value=9.4e-06 Score=62.40 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=36.0
Q ss_pred CCcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+....+|.|.|.+++ +.|.|+|+|++|+++|+.+|+.||.
T Consensus 83 d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 83 DKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp GGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred ccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 556779999999865 7999999999999999999999985
No 116
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.93 E-value=1.2e-05 Score=63.97 Aligned_cols=37 Identities=16% Similarity=0.307 Sum_probs=34.0
Q ss_pred CCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 10 ~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+..+.|.|.++.|+|.|+|+|++|+++||.+|+.++.
T Consensus 77 ~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 77 KNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp SCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 3468999999999999999999999999999998775
No 117
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.93 E-value=8.1e-06 Score=63.24 Aligned_cols=47 Identities=15% Similarity=0.295 Sum_probs=40.4
Q ss_pred CeeecCC-CcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 1 MKVCLPQ-TEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 1 m~v~~~~-~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
|.|...+ .++++|+|+|.++. +++.|.|.|.+|++.|+++|+.+|+.
T Consensus 79 ~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~ 127 (132)
T 1v61_A 79 MVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKS 127 (132)
T ss_dssp CBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred eEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 4555443 46799999999988 99999999999999999999998864
No 118
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=97.92 E-value=1.1e-05 Score=61.64 Aligned_cols=39 Identities=15% Similarity=0.271 Sum_probs=35.0
Q ss_pred CcCCCceEEEEE-eceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 8 TEDYNNEFSVIA-ISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 8 ~~~~~~~f~i~~-~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
..+.+|+|.|.+ +.++|.|+|+|++|+++||++|+.+|.
T Consensus 80 ~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 80 YTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp SSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 346789999996 669999999999999999999999885
No 119
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.90 E-value=2.3e-05 Score=58.39 Aligned_cols=39 Identities=21% Similarity=0.384 Sum_probs=33.8
Q ss_pred CcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 8 TEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 8 ~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
....+++|.|.++. |+|.|+|+|++|+++||++|+.|+.
T Consensus 64 ~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 64 ENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp SSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 34457999999885 7899999999999999999998864
No 120
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.90 E-value=1.2e-05 Score=61.28 Aligned_cols=40 Identities=33% Similarity=0.529 Sum_probs=36.8
Q ss_pred CCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 10 ~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
..+++|.|.++.|+|.|+|+|++|+++|+++|+.++....
T Consensus 75 ~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~~ 114 (125)
T 1eaz_A 75 MRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQR 114 (125)
T ss_dssp TCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHTC
T ss_pred CcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 4589999999999999999999999999999999997643
No 121
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=97.89 E-value=1.8e-05 Score=60.75 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=41.1
Q ss_pred eeecCCCcCCCceEEEEEe--ceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 2 KVCLPQTEDYNNEFSVIAI--SRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 2 ~v~~~~~~~~~~~f~i~~~--~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
.|+.++++..+|+|+|.++ ...|.|+|+|++++++|+.+|..|+..
T Consensus 66 ~V~~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~ 113 (126)
T 2dtc_A 66 MVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKS 113 (126)
T ss_dssp EEECCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTS
T ss_pred EEEecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhc
Confidence 4667788889999999976 779999999999999999999999864
No 122
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=97.89 E-value=1.9e-05 Score=60.28 Aligned_cols=45 Identities=22% Similarity=0.341 Sum_probs=37.7
Q ss_pred eecCCCcCCCceEEEEEec----------------------eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 3 VCLPQTEDYNNEFSVIAIS----------------------RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 3 v~~~~~~~~~~~f~i~~~~----------------------ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
|....+...+++|.|.++. |+|.|.|+|++|+++||++|+.+|..
T Consensus 55 v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 121 (127)
T 1fgy_A 55 IREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 121 (127)
T ss_dssp EEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 3334455778999998764 89999999999999999999999975
No 123
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=97.88 E-value=1e-05 Score=59.68 Aligned_cols=37 Identities=24% Similarity=0.427 Sum_probs=34.0
Q ss_pred CCceEEEEEe-ceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAI-SRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 11 ~~~~f~i~~~-~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
.++.|.|.++ .|+|.|.|+|++|+++|+++|+.|+..
T Consensus 57 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 57 DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp CSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred CCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 4789999998 899999999999999999999988754
No 124
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.87 E-value=2.2e-05 Score=59.13 Aligned_cols=39 Identities=26% Similarity=0.337 Sum_probs=35.2
Q ss_pred cCCCceEEEEE--------eceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIA--------ISRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 9 ~~~~~~f~i~~--------~~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
...+++|.|.+ +.|+|.|.|+|++|+++||++|+.++..
T Consensus 67 ~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 113 (118)
T 1v89_A 67 EAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGS 113 (118)
T ss_dssp CCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred cCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHcc
Confidence 34578999998 8899999999999999999999999864
No 125
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.85 E-value=1.8e-05 Score=59.60 Aligned_cols=37 Identities=32% Similarity=0.715 Sum_probs=34.8
Q ss_pred CceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 12 NNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 12 ~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
+++|.|.++.|+|.|.|+|++|+++||++|+.++...
T Consensus 65 ~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~ 101 (115)
T 2cod_A 65 DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQ 101 (115)
T ss_dssp TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999999653
No 126
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=97.83 E-value=1.6e-05 Score=64.22 Aligned_cols=40 Identities=20% Similarity=0.368 Sum_probs=36.1
Q ss_pred CCcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+....+|+|.|.+++|+|.|+|+|++|+++||++|+.++.
T Consensus 72 ~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 72 SETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp SSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999999998864
No 127
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=97.81 E-value=3.3e-05 Score=59.01 Aligned_cols=42 Identities=26% Similarity=0.330 Sum_probs=36.9
Q ss_pred cCCCceEEEEE----eceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 9 EDYNNEFSVIA----ISRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 9 ~~~~~~f~i~~----~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
...+++|.|.+ +.|+|.|+|+|++|+++||++|+.++.....
T Consensus 69 ~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 69 RPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp SSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 46679999995 6899999999999999999999999977554
No 128
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=97.78 E-value=3e-05 Score=57.53 Aligned_cols=35 Identities=40% Similarity=0.599 Sum_probs=32.5
Q ss_pred CCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAI 45 (305)
Q Consensus 11 ~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai 45 (305)
.+++|.|.++. ++|.|.|+|++|+++|+++|+.++
T Consensus 73 ~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 73 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 68999999986 679999999999999999999886
No 129
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.77 E-value=3.6e-05 Score=58.44 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=34.5
Q ss_pred CCcCCCceEEEEEe-ceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAI-SRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 7 ~~~~~~~~f~i~~~-~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+....+++|.|.++ .|+|.|.|+|++|+++||++|+.++.
T Consensus 80 ~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 80 DNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp CSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 34567889999865 69999999999999999999998863
No 130
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=2.6e-05 Score=58.66 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=34.5
Q ss_pred CCcCCCceEEEEEe-ceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAI-SRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 7 ~~~~~~~~f~i~~~-~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+....+|+|.|.++ .|+|.|.|+|++|+++||++|+.++.
T Consensus 69 ~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 69 DNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp TTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred ccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 34567889999764 69999999999999999999998874
No 131
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=97.75 E-value=2.5e-05 Score=59.84 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=33.8
Q ss_pred CCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 10 ~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
..+++|.|.++. |+|.|.|+|++|+++|+++|+.|+.
T Consensus 82 ~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 82 NRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp SSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred CCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 567899999986 9999999999999999999998864
No 132
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=97.75 E-value=6.6e-05 Score=57.96 Aligned_cols=40 Identities=20% Similarity=0.318 Sum_probs=35.0
Q ss_pred CCCceEEEEE--ec------------------eEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIA--IS------------------RSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 10 ~~~~~f~i~~--~~------------------ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
..+|+|.|.+ |. |+|.|+|+|++|+++||++|+.+|....
T Consensus 72 ~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~~~ 131 (134)
T 2y7b_A 72 ARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVDIR 131 (134)
T ss_dssp CCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHh
Confidence 5689999998 43 5899999999999999999999998743
No 133
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=97.73 E-value=4e-05 Score=58.81 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=33.7
Q ss_pred cCCCceEEEEEe---ceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAI---SRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 9 ~~~~~~f~i~~~---~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
...+++|+|.++ .+.|.|.|+|++|+++||.+|+.++..
T Consensus 79 ~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 79 NQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp TTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 456789999986 478999999999999999999998754
No 134
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.69 E-value=5.7e-05 Score=65.72 Aligned_cols=46 Identities=17% Similarity=0.317 Sum_probs=39.8
Q ss_pred CCCcCCCceEEEEE-eceEEEEEeCCHHHHHHHHHHHHHHHHHHHhc
Q psy2207 6 PQTEDYNNEFSVIA-ISRSFTLRARSANERLEWIDAIQTAIKENEQH 51 (305)
Q Consensus 6 ~~~~~~~~~f~i~~-~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~ 51 (305)
+++.+.+|+|.|.+ ..++|.|+|+|++|+++||++|+.++.....+
T Consensus 83 ~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~~~ 129 (263)
T 3a8p_A 83 PEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLFAK 129 (263)
T ss_dssp TTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Confidence 45556789999999 68999999999999999999999998876543
No 135
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.69 E-value=0.00046 Score=53.60 Aligned_cols=78 Identities=19% Similarity=0.263 Sum_probs=57.1
Q ss_pred ceEEEEEEECCEEEEE----cc-CccCccceEEEecCeEEEEccccCCcceeEEEEeCC-----ceeEEEEcCCHHHHHH
Q psy2207 224 WKRYWFVLKDQVMYKY----KA-SEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQG-----QDPLVFGADNEQSYER 293 (305)
Q Consensus 224 wkrrw~vL~~~~L~~y----~~-~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~-----~~~~~f~a~s~e~~~~ 293 (305)
-.|..|.+.|-.||.. +. .....-...++|.|..|...... ..+|+|.|.... ...+.|.|+|.+++.+
T Consensus 34 qqR~~FLFND~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~~~e~e-~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~r 112 (140)
T 3qwm_A 34 HQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQ-YYPNGIRLTSSVPGADIKVLINFNAPNPQDRKK 112 (140)
T ss_dssp TEEEEEEESSCEEEEECCC---CCCCCCCEEEECCTTEEEEEECCS-SCTTEEEEEECCTTSCCEEEEEEECSSHHHHHH
T ss_pred cceEEEEecchhhheeecccCCCCCceEEEEEeeecceEEEcccCC-CCceEEEEEecCCCCcceEEEEEECCCHHHHHH
Confidence 3555566677777774 11 11234567899999999866443 478999999642 4679999999999999
Q ss_pred HHHHHHHHH
Q psy2207 294 WMKAMREAT 302 (305)
Q Consensus 294 Wi~al~~a~ 302 (305)
|+++|+.|+
T Consensus 113 wi~dL~esI 121 (140)
T 3qwm_A 113 FTDDLRESI 121 (140)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 136
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.68 E-value=2.6e-05 Score=61.59 Aligned_cols=43 Identities=16% Similarity=0.350 Sum_probs=35.6
Q ss_pred CcCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 8 TEDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 8 ~~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
....+++|.|.++. |+|.|+|+|++|+++||++|+.++.....
T Consensus 80 ~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 80 DGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp STTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred CCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 44557999999987 99999999999999999999999876543
No 137
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.68 E-value=4.6e-05 Score=57.90 Aligned_cols=39 Identities=18% Similarity=0.328 Sum_probs=35.0
Q ss_pred cCCCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 9 ~~~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
...+++|.|.++. |+|.|.|+|++|+++|+.+|+.++..
T Consensus 71 ~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 71 RGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp TSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred CCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 4568999999987 99999999999999999999999864
No 138
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=97.64 E-value=5.1e-05 Score=58.25 Aligned_cols=37 Identities=38% Similarity=0.590 Sum_probs=33.9
Q ss_pred CCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 11 ~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
.+++|.|.++. |+|.|+|+|++|+++||++|+.++..
T Consensus 84 ~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 84 EENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp SCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 68999999985 77999999999999999999999864
No 139
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.62 E-value=5.4e-05 Score=65.90 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=36.3
Q ss_pred CCcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
.+.+.+|+|.|.++.|+|.|.|+|++|+++||++|+.++...
T Consensus 73 ~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 73 ADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp CCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred cCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 346678999999999999999999999999999999988764
No 140
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.62 E-value=5.3e-05 Score=58.71 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=32.3
Q ss_pred CCCceEEEEEec------------------------eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAIS------------------------RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 10 ~~~~~f~i~~~~------------------------ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
+.+++|.|.++. +.|.|.|+|++|+++||++|+.|+..
T Consensus 64 ~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 64 KDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp TSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 445899999764 45999999999999999999999853
No 141
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.61 E-value=2.8e-05 Score=59.72 Aligned_cols=36 Identities=36% Similarity=0.574 Sum_probs=33.2
Q ss_pred CCceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAIS-RSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 11 ~~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
.+++|.|.+++ |+|.|+|+|++|+++||++|+.++.
T Consensus 88 ~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 88 QGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred CCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 57999999997 6899999999999999999999874
No 142
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.52 E-value=0.00012 Score=55.40 Aligned_cols=35 Identities=29% Similarity=0.388 Sum_probs=31.4
Q ss_pred CCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAI 45 (305)
Q Consensus 10 ~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai 45 (305)
+..++|.|.|++|+|.|.|+++ |+++||.+|.+..
T Consensus 86 k~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 86 RDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLA 120 (127)
T ss_dssp SSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHH
T ss_pred CcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHh
Confidence 6779999999999999999975 8999999998643
No 143
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.44 E-value=0.00016 Score=54.82 Aligned_cols=38 Identities=18% Similarity=0.439 Sum_probs=33.3
Q ss_pred cCCCceEEEEEe------ceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAI------SRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 9 ~~~~~~f~i~~~------~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
.++++.|+|... .++|.|.|+|++|+++|+.+|..+|.
T Consensus 72 ~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 72 KEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp TTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred ccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 457889999874 59999999999999999999998763
No 144
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=97.37 E-value=0.00028 Score=53.80 Aligned_cols=35 Identities=17% Similarity=0.412 Sum_probs=31.0
Q ss_pred CCceEEEEEec-------eEEEEEeCCHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAIS-------RSFTLRARSANERLEWIDAIQTAI 45 (305)
Q Consensus 11 ~~~~f~i~~~~-------ksf~~~a~s~~ek~~W~~~i~~ai 45 (305)
..+.|.|.++. ++|.|.|+|++|+++||++|+.++
T Consensus 76 ~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 76 SDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp -CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 67899999876 599999999999999999999864
No 145
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.37 E-value=0.0013 Score=59.36 Aligned_cols=92 Identities=14% Similarity=0.242 Sum_probs=66.7
Q ss_pred CceeeeeeeccCCCceEEEEEEECCEEEEEccCcc-----------CccceEEEecCeEEEEccccCCcceeEEEEeCCc
Q psy2207 210 SQHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASED-----------IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ 278 (305)
Q Consensus 210 ~~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~d-----------~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~ 278 (305)
.++.|.|.+.+ .++.+++.|=+..|.+-+.... ..-.+.|+|.++.|....+....++.|.|.+...
T Consensus 247 li~eG~l~~~g--~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~ 324 (354)
T 1dbh_A 247 FIMEGTLTRVG--AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDE 324 (354)
T ss_dssp EEEEEEEEETT--CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSSSCCSEEEECCTTS
T ss_pred EEEEeeEEEEe--cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcccccCccEEEecCCC
Confidence 45677776653 5677777776666666664321 1124678898888876544445678999987655
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 279 DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
..|.|.|.|+++.+.|+++|.+|..
T Consensus 325 ~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 325 NSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 6799999999999999999998753
No 146
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.36 E-value=0.00075 Score=55.42 Aligned_cols=92 Identities=10% Similarity=0.111 Sum_probs=61.5
Q ss_pred CCceeeeeeecc-CCCceEEEEEEECCEEEEEccCccCc-------cceEEEecCeEEEEccccCCcceeEEEEeC---C
Q psy2207 209 GSQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDIK-------ALLSIPVLGYELEALNEQDNFKYVFQLKHQ---G 277 (305)
Q Consensus 209 ~~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~~-------p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~---~ 277 (305)
..++.|-|..+. .+.++.+++.|=+..|.+-....+.. ....|+|.++.|.....+ . ..|-|+.. +
T Consensus 70 ~Ll~eG~L~~k~~~~~~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~d--~-~~~fli~~~~~g 146 (185)
T 2lg1_A 70 KLVRDGSVFLKNAAGRLKEVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAHE--E-KGLFLISMGMTD 146 (185)
T ss_dssp CEEEEEEEEEECTTCCEEEEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSSC--S-SEEEEECCSSSC
T ss_pred ceeeeceEEEeccCCCeeeEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCCC--C-CeEEEEEecCCC
Confidence 457899997554 55789999988665554443211110 124577888887643322 2 24555542 3
Q ss_pred ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 278 QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 278 ~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
...|.|.|.|.++.+.|+++|+.|+.
T Consensus 147 ~~~yel~a~s~~er~~W~~~I~~Ai~ 172 (185)
T 2lg1_A 147 PEMVEVHASSKEERNSWIQIIQDTIN 172 (185)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 56899999999999999999998864
No 147
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=97.34 E-value=0.00077 Score=62.72 Aligned_cols=91 Identities=15% Similarity=0.287 Sum_probs=63.0
Q ss_pred ceeeeeeeccCCCceEEEEEEECCEEEEEccCcc--CccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEcCCH
Q psy2207 211 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNE 288 (305)
Q Consensus 211 ~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~d--~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a~s~ 288 (305)
+..|.|.+...+.++.+|+.|=...|.+-+...+ ......|+|.+..|.... ....++.|.|..+ ...|.|.|.|+
T Consensus 245 i~~g~l~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~-~~~~~~~f~i~~~-~~~~~l~a~s~ 322 (434)
T 3mpx_A 245 LKEGTLMKVTGKNRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPV-MEKVPYALKIETS-ESCLMLSASSC 322 (434)
T ss_dssp EECCEEEEEETTEEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCCC-CTTSCSEEEEECS-SCEEEEECSSH
T ss_pred EecceEEEEeCCCceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEecC-CCCCCeeEEEecC-CeEEEEecCCH
Confidence 5778887655556788999998778877775432 234567888887775332 2356799999754 45799999999
Q ss_pred HHHHHHHHHHHHHHc
Q psy2207 289 QSYERWMKAMREATT 303 (305)
Q Consensus 289 e~~~~Wi~al~~a~~ 303 (305)
++.+.|+++|++|+.
T Consensus 323 ~ek~~W~~~i~~ai~ 337 (434)
T 3mpx_A 323 AERDEWYGCLSRALP 337 (434)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998763
No 148
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.29 E-value=0.0042 Score=47.86 Aligned_cols=78 Identities=9% Similarity=0.133 Sum_probs=53.4
Q ss_pred eEEEEEEEC-CEEEEEccC--ccCccceEEEecCeEEEEccc----------cCCcceeEEEEeCCc-eeEEEEcCCHHH
Q psy2207 225 KRYWFVLKD-QVMYKYKAS--EDIKALLSIPVLGYELEALNE----------QDNFKYVFQLKHQGQ-DPLVFGADNEQS 290 (305)
Q Consensus 225 krrw~vL~~-~~L~~y~~~--~d~~p~~~i~L~~~~v~~~~~----------~~~~~~~F~l~~~~~-~~~~f~a~s~e~ 290 (305)
+.++|.|.+ ...++|.+. ......+.|+|..+.-+.... ......+|.|++.+. +++.|.|+|+++
T Consensus 29 k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~~e 108 (131)
T 1mai_A 29 RERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSPAD 108 (131)
T ss_dssp EEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSHHH
T ss_pred eeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCHHH
Confidence 567777764 445566421 123467889997765443322 112458999999774 689999999999
Q ss_pred HHHHHHHHHHHH
Q psy2207 291 YERWMKAMREAT 302 (305)
Q Consensus 291 ~~~Wi~al~~a~ 302 (305)
++.|+.+|+.-+
T Consensus 109 ~~~Wv~gL~~L~ 120 (131)
T 1mai_A 109 AQHWVQGLRKII 120 (131)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999997543
No 149
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.10 E-value=0.0038 Score=57.53 Aligned_cols=94 Identities=16% Similarity=0.231 Sum_probs=65.3
Q ss_pred Cceeeeeeecc--CCCceEEEEEEECCEEEEEccCcc-CccceEEEecCeEEEEcccc----CCcceeEEEEeC-CceeE
Q psy2207 210 SQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED-IKALLSIPVLGYELEALNEQ----DNFKYVFQLKHQ-GQDPL 281 (305)
Q Consensus 210 ~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d-~~p~~~i~L~~~~v~~~~~~----~~~~~~F~l~~~-~~~~~ 281 (305)
.++.|.|.... .+.++.+++.|=+..|.+-+...+ ..-...|+|.++.|...++. ...++.|.|.+. +...|
T Consensus 234 li~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~ 313 (406)
T 2vrw_B 234 PKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGY 313 (406)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEE
T ss_pred ccccccEEEEecCCCccceEEEEecCCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceE
Confidence 46778887664 456788888886666666654322 22346788888877643322 123589999874 45679
Q ss_pred EEEcCCHHHHHHHHHHHHHHHc
Q psy2207 282 VFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 282 ~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.|.|.|+++.+.|+++|++|..
T Consensus 314 ~l~a~s~~ek~~W~~~i~~ai~ 335 (406)
T 2vrw_B 314 ELFFKTRELKKKWMEQFEMAIS 335 (406)
T ss_dssp EEEESSHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999998763
No 150
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.08 E-value=0.0058 Score=56.45 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=64.9
Q ss_pred Cceeeeeeecc-CCCceEEEEEEECCEEEEEccCccC------------------ccceEEEecCeEEEEccccCCccee
Q psy2207 210 SQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDI------------------KALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 210 ~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~------------------~p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
.++.|.|.... .+.++.+++.|=...|.+-+...+. .-...|+|.+..|.... +....
T Consensus 295 li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~---~~~~~ 371 (418)
T 3t06_A 295 MIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA---TDKRA 371 (418)
T ss_dssp EEEEEEEEECCBTTBCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS---SCSSE
T ss_pred eEEeceEEEEeCCCCeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccc---ccCce
Confidence 46888887765 5567888888877766666533211 11357888888876432 22357
Q ss_pred EEEEeCC----ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 271 FQLKHQG----QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 271 F~l~~~~----~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|.|.... ...|.|.|.|.++.+.|+++|++|+.
T Consensus 372 f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~ 408 (418)
T 3t06_A 372 FFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 408 (418)
T ss_dssp EEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8887643 25899999999999999999998875
No 151
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=97.06 E-value=0.0044 Score=61.48 Aligned_cols=93 Identities=23% Similarity=0.412 Sum_probs=69.2
Q ss_pred Cceeeeeeecc----CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEcccc-CCcceeEEEEeCCce-----
Q psy2207 210 SQHSGWLHKKS----GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQ-DNFKYVFQLKHQGQD----- 279 (305)
Q Consensus 210 ~~~~G~L~~~~----~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~-~~~~~~F~l~~~~~~----- 279 (305)
++..|||.... +..-+.+||||....|.+|++++...-.-.++|.+..+...... .++++.|.|..+..+
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKD 619 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCCEEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTT
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhcccccccccccccchhhhccccccccccccCCccccccch
Confidence 46779998765 44678999999999999999977766677888888776543322 356789999987664
Q ss_pred --eEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 280 --PLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 280 --~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
.+-++|++.++...|...+-.|-
T Consensus 620 ~~~~~l~~~~~~~~~~~~~~~~~~~ 644 (772)
T 3zvr_A 620 YRQLELACETQEEVDSWKASFLRAG 644 (772)
T ss_dssp BSEEEEEESSHHHHHHHHHHHHHTT
T ss_pred hhhhhhhccccccchhhHHhhhhcc
Confidence 56899999999999999985543
No 152
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=97.06 E-value=0.00082 Score=52.02 Aligned_cols=102 Identities=15% Similarity=0.177 Sum_probs=63.1
Q ss_pred EEeCCHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCcccCcCCCCCeeeecCCCccccccccccc-ccccccccc
Q psy2207 26 LRARSANERLEWIDAIQTAIKENEQHLLSFLNRRSLTQSSIPELNLGKVAPLWIPDSRVSMCQRCTSVFT-VTFRRHHCR 104 (305)
Q Consensus 26 ~~a~s~~ek~~W~~~i~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~~d~~~~~C~~C~~~f~-~~~rrhhCr 104 (305)
++.-|++|++--++.|+..-............... ...+...... ......|+.|..+|+ +.++.+.|.
T Consensus 7 ls~LteeE~~~Il~Vl~Rd~~l~~~E~~ri~kL~~-~l~~~k~~~~---------~~~~~~C~~C~~~~g~l~~~g~~C~ 76 (134)
T 1zbd_B 7 QEELTDEEKEIINRVIARAEKMETMEQERIGRLVD-RLETMRKNVA---------GDGVNRCILCGEQLGMLGSASVVCE 76 (134)
T ss_dssp -CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCC---------SCSSSBCSSSCCBCSTTSCCEEECT
T ss_pred cccCCHHHHHHHHHHHhhHHHHHHhHHHHHHHHHH-HHHHHHHHhc---------cCCCccccccCCCcccccCCCCCCC
Confidence 45568999988888888754332111110000000 0000000001 134678999999998 458899999
Q ss_pred cccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 105 ACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 105 ~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
.|..-||.+|..+.. +......=+|..|...-.
T Consensus 77 ~C~~~VC~~C~~~~~---~~~~~~~W~C~vC~k~re 109 (134)
T 1zbd_B 77 DCKKNVCTKCGVETS---NNRPHPVWLCKICLEQRE 109 (134)
T ss_dssp TTCCEEETTSEEECC---CSSSSCCEEEHHHHHHHH
T ss_pred CCCcccccccCCccC---CCCCccceechhhHHHHH
Confidence 999999999998742 224567789999998755
No 153
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.05 E-value=0.00058 Score=61.78 Aligned_cols=45 Identities=20% Similarity=0.347 Sum_probs=38.0
Q ss_pred eecCCCcCCCceEEEEEe----------------------ceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 3 VCLPQTEDYNNEFSVIAI----------------------SRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 3 v~~~~~~~~~~~f~i~~~----------------------~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
|...+....+++|+|.++ .|+|.|+|+|++|+++||++|+.++..
T Consensus 263 v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~ 329 (347)
T 2r09_A 263 IREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISR 329 (347)
T ss_dssp EEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHC
T ss_pred EEEccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 344445577899999987 489999999999999999999999864
No 154
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=97.05 E-value=0.00068 Score=51.39 Aligned_cols=35 Identities=17% Similarity=0.322 Sum_probs=30.9
Q ss_pred CCCceEEEEEec--------eEEEEEeCCHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAIS--------RSFTLRARSANERLEWIDAIQTA 44 (305)
Q Consensus 10 ~~~~~f~i~~~~--------ksf~~~a~s~~ek~~W~~~i~~a 44 (305)
..+|+|.|..++ ++|.|.|+|++|+++|+.+|.+|
T Consensus 73 ~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 73 SSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp SSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 568999999976 49999999999999999999544
No 155
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.02 E-value=0.0083 Score=56.23 Aligned_cols=93 Identities=19% Similarity=0.248 Sum_probs=66.1
Q ss_pred Cceeeeeeecc--CCCceEEEEEEECCEEEEEccCcc----CccceEEEecCeEEEEccccC------CcceeEEEEeCC
Q psy2207 210 SQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED----IKALLSIPVLGYELEALNEQD------NFKYVFQLKHQG 277 (305)
Q Consensus 210 ~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d----~~p~~~i~L~~~~v~~~~~~~------~~~~~F~l~~~~ 277 (305)
.++.|.|.+.. .+..+.+++.|=+..|.+-+.... ..-.+.|+|.++.|....+.. ..++.|.|....
T Consensus 334 li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~ 413 (466)
T 2pz1_A 334 LIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGA 413 (466)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSS
T ss_pred eEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCcccccccccceeEEEEeCC
Confidence 46778776654 345778888887777766664321 123567889888887543321 345899998653
Q ss_pred -ceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 278 -QDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 278 -~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
...|.|.|.|.++.+.|+++|+.|.
T Consensus 414 ~~~~~~l~a~s~~eK~~W~~~i~~a~ 439 (466)
T 2pz1_A 414 TGDSHLLCTRKPEQKQRWLKAFARER 439 (466)
T ss_dssp SCCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 4579999999999999999998875
No 156
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=96.91 E-value=0.0072 Score=55.63 Aligned_cols=93 Identities=20% Similarity=0.206 Sum_probs=65.3
Q ss_pred Cceeeeeeecc--CCCceEEEEEEECCEEEEEccCcc----CccceEEEecCeEEEEccccC------CcceeEEEEeCC
Q psy2207 210 SQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED----IKALLSIPVLGYELEALNEQD------NFKYVFQLKHQG 277 (305)
Q Consensus 210 ~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d----~~p~~~i~L~~~~v~~~~~~~------~~~~~F~l~~~~ 277 (305)
.++.|.|.... .+..+.+++.|=+..|.+-+.... ..-.+.|+|.++.|....+.. ..++.|.|.+..
T Consensus 257 Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~ 336 (402)
T 2dfk_A 257 LIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKE 336 (402)
T ss_dssp EEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESS
T ss_pred eEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCCccccccccceeEEEEECC
Confidence 46778877654 345678888887776666664321 123467888888887543321 234799998753
Q ss_pred -ceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 278 -QDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 278 -~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
...|.|.|.|.++.+.|+++|..|.
T Consensus 337 ~~~~~~l~a~s~~eK~~Wi~~i~~a~ 362 (402)
T 2dfk_A 337 TEEVHLFFAKKLEEKIRWLRAFREER 362 (402)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 4579999999999999999998775
No 157
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=96.88 E-value=0.012 Score=53.25 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=63.7
Q ss_pred Cceeeeeeecc-CCCceEEEEEEECCEEEEEccCccC------------------ccceEEEecCeEEEEccccCCccee
Q psy2207 210 SQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDI------------------KALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 210 ~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~------------------~p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
.++.|.|.... .+.++.+++.|=+..|.+-+...+. .-.+.|+|.++.|.... +.+..
T Consensus 253 li~~G~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~---~~~~~ 329 (368)
T 1xcg_A 253 MIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA---TDKRA 329 (368)
T ss_dssp EEEEEEEEECCSSSCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS---SCSSE
T ss_pred EEeecceEeeecCCCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeeccc---CCCce
Confidence 46788887654 5567888888866666665543210 11457888887775432 22357
Q ss_pred EEEEeCC----ceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 271 FQLKHQG----QDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 271 F~l~~~~----~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|.|.+.. ...|.|.|.|.++.+.|+++|++|+.
T Consensus 330 f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 330 FFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp EEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8877642 36799999999999999999999874
No 158
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=96.74 E-value=0.011 Score=56.67 Aligned_cols=92 Identities=10% Similarity=0.081 Sum_probs=60.9
Q ss_pred Cceeeeeeecc-CCCceEEEEEEECCEEEEEccCccC------------------ccceEEEecCeEEEEccccCCccee
Q psy2207 210 SQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDI------------------KALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 210 ~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~------------------~p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
.++.|.|..+. .+.++.+++.|=...|.+-+...+. .....|+|.++.|...... ...
T Consensus 412 LI~eG~l~~~~~~~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~d---~~~ 488 (536)
T 3odw_A 412 LVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD---HKA 488 (536)
T ss_dssp EEEEEEEEEESCC---CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTTC---TTE
T ss_pred eeeecceEEEecCCCeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeeccccc---CCc
Confidence 57889887765 5567888888866666665532210 0123588888877654322 235
Q ss_pred EEEEeC---CceeEEEEcCCHHHHHHHHHHHHHHHcC
Q psy2207 271 FQLKHQ---GQDPLVFGADNEQSYERWMKAMREATTL 304 (305)
Q Consensus 271 F~l~~~---~~~~~~f~a~s~e~~~~Wi~al~~a~~~ 304 (305)
|.|+.. +...|.|.|.|.++.+.|++.|++|+.-
T Consensus 489 ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~ 525 (536)
T 3odw_A 489 FYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 525 (536)
T ss_dssp EEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred eEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 555543 4567999999999999999999998753
No 159
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=96.67 E-value=0.016 Score=52.63 Aligned_cols=91 Identities=10% Similarity=0.087 Sum_probs=61.5
Q ss_pred Cceeeeeeecc-CCCceEEEEEEECCEEEEEccCccC------------------ccceEEEecCeEEEEccccCCccee
Q psy2207 210 SQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDI------------------KALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 210 ~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~------------------~p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
.++.|.|..+. .+.++.+++.|=...|.+-+...+. .....|+|.+..|...... . ..
T Consensus 259 li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~--~-~~ 335 (377)
T 3p6a_A 259 LVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD--H-KA 335 (377)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC--T-TE
T ss_pred EEEECCcEEEecCCCeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccc--c-ce
Confidence 57889986655 5578888888866666665532210 0123688888777653322 2 24
Q ss_pred EEEEeC---CceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 271 FQLKHQ---GQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 271 F~l~~~---~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|.+... +...|.|.|.|.++.+.|++.|++|+.
T Consensus 336 ~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 336 FYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp EEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 444443 456799999999999999999998874
No 160
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=96.63 E-value=0.012 Score=56.84 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=65.8
Q ss_pred Cceeeeeeecc--CCCceEEEEEEECCEEEEEccCcc-CccceEEEecCeEEEEcccc----CCcceeEEEEeCC-ceeE
Q psy2207 210 SQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED-IKALLSIPVLGYELEALNEQ----DNFKYVFQLKHQG-QDPL 281 (305)
Q Consensus 210 ~~~~G~L~~~~--~~~wkrrw~vL~~~~L~~y~~~~d-~~p~~~i~L~~~~v~~~~~~----~~~~~~F~l~~~~-~~~~ 281 (305)
.++.|.|.... .+.++.+++.|=...|.+-+...+ ......|+|.++.|...... ...++.|.|.+.. ...|
T Consensus 406 ll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 485 (587)
T 3ky9_A 406 PKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGY 485 (587)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---C
T ss_pred eEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCCEEEeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceE
Confidence 46788887664 566788888887776666554322 33467788988888754322 2345899999854 3679
Q ss_pred EEEcCCHHHHHHHHHHHHHHH
Q psy2207 282 VFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 282 ~f~a~s~e~~~~Wi~al~~a~ 302 (305)
.|.|.|.++.+.|+++|++|.
T Consensus 486 ~L~A~S~eeK~~Wi~~I~~ai 506 (587)
T 3ky9_A 486 ELFFKTRELKKKWMEQFEMAI 506 (587)
T ss_dssp EEEESSHHHHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHHHh
Confidence 999999999999999999876
No 161
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=96.61 E-value=0.015 Score=53.02 Aligned_cols=92 Identities=13% Similarity=0.120 Sum_probs=60.9
Q ss_pred Cceeeeeeecc-CCCceEEEEEEECCEEEEEccCccC------------------ccceEEEecCeEEEEccccCCccee
Q psy2207 210 SQHSGWLHKKS-GRNWKRYWFVLKDQVMYKYKASEDI------------------KALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 210 ~~~~G~L~~~~-~~~wkrrw~vL~~~~L~~y~~~~d~------------------~p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
.++.|.|.... ...++.+++.|=+..|.+-+...+. .-.+.|+|.++.|.....+ .+..
T Consensus 257 li~eG~l~~~~~~~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~d--~~~~ 334 (385)
T 1txd_A 257 MIHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVATD--NKAL 334 (385)
T ss_dssp EEEEEEEEEESSSSCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC---CCEE
T ss_pred EEEECcEEEEcCCCCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceecccccccccccC--CceE
Confidence 46788887554 4557778887766666555432211 1245688888777653222 2345
Q ss_pred EEEEe--CCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 271 FQLKH--QGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 271 F~l~~--~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|.|.. .+...|.|.|.|.++.+.|+++|.+|+.
T Consensus 335 f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~ 369 (385)
T 1txd_A 335 FVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAA 369 (385)
T ss_dssp EEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 66654 2456899999999999999999998763
No 162
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=96.51 E-value=0.012 Score=52.83 Aligned_cols=89 Identities=19% Similarity=0.314 Sum_probs=60.4
Q ss_pred ceeeeeeeccCCCceEEEEEEECCEEEEEccCc--cC---c-cceEEEecCeEEEEcccc---------------CCcce
Q psy2207 211 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASE--DI---K-ALLSIPVLGYELEALNEQ---------------DNFKY 269 (305)
Q Consensus 211 ~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~--d~---~-p~~~i~L~~~~v~~~~~~---------------~~~~~ 269 (305)
+..|.|.+.. -+.+++.|=+..|.+-+... +. . -...|+|.+..|....+. ...++
T Consensus 233 i~~G~l~~~~---~~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~ 309 (346)
T 2z0q_A 233 CCHGELKNNR---GVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKN 309 (346)
T ss_dssp EEEEEEEETT---SCEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSS
T ss_pred EEeceeEECC---CcEEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCccccc
Confidence 5677776532 26677777666666655421 11 1 245688888887754322 12357
Q ss_pred eEEEEeC---CceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 270 VFQLKHQ---GQDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 270 ~F~l~~~---~~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
.|.|.+. ....|.|.|.|.++.+.|+++|++|.
T Consensus 310 ~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 310 FFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 9999863 34679999999999999999999985
No 163
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=96.51 E-value=0.0041 Score=58.39 Aligned_cols=41 Identities=17% Similarity=0.303 Sum_probs=36.3
Q ss_pred CCCceEEEEEe--ceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 10 DYNNEFSVIAI--SRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 10 ~~~~~f~i~~~--~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
.++|+|.|.++ .++|.|+|.|++||+.|+++|++++.....
T Consensus 402 ~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~ 444 (466)
T 2pz1_A 402 SIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQL 444 (466)
T ss_dssp CBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 46799999986 579999999999999999999999987654
No 164
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=96.47 E-value=0.00045 Score=65.56 Aligned_cols=48 Identities=31% Similarity=0.511 Sum_probs=0.0
Q ss_pred eeecC-CCcCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 2 KVCLP-QTEDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 2 ~v~~~-~~~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
.|..+ +....+++|.|.++.++|.|+|.|++||++|+++|++++....
T Consensus 317 ~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 365 (510)
T 3jzy_A 317 LVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYI 365 (510)
T ss_dssp -------------------------------------------------
T ss_pred EEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 34444 3346789999999999999999999999999999999998754
No 165
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=96.47 E-value=0.0044 Score=55.99 Aligned_cols=40 Identities=15% Similarity=0.387 Sum_probs=35.6
Q ss_pred CCceEEEEE--eceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 11 YNNEFSVIA--ISRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 11 ~~~~f~i~~--~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
.+++|.|.. +.++|.|+|.|++||+.|+++|+++|.+..+
T Consensus 288 ~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 329 (353)
T 1kz7_A 288 DTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ 329 (353)
T ss_dssp BTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 478999987 5689999999999999999999999987654
No 166
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=96.46 E-value=0.0017 Score=51.39 Aligned_cols=51 Identities=25% Similarity=0.567 Sum_probs=43.2
Q ss_pred Ccccccccccccc-cccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 84 VSMCQRCTSVFTV-TFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 84 ~~~C~~C~~~f~~-~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
.+.|+.|..+|++ .++.+-|..|..-||.+|..+. .....=+|..|+..-.
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~------~~~~~W~C~vC~k~re 119 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAH------PEEQGWLCDPCHLARV 119 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECC------SSSSSCEEHHHHHHHH
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhccccccc------CCCCcEeeHHHHHHHH
Confidence 5789999999995 5889999999999999999543 2456789999998754
No 167
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=96.45 E-value=0.0037 Score=57.61 Aligned_cols=41 Identities=17% Similarity=0.344 Sum_probs=36.0
Q ss_pred CCCceEEEEEe--ceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 10 DYNNEFSVIAI--SRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 10 ~~~~~f~i~~~--~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
.++|+|.|.++ .++|.|+|+|++||+.|+++|++++....+
T Consensus 325 ~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 325 SMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp EESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 35799999986 579999999999999999999999887554
No 168
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=96.35 E-value=0.0029 Score=55.16 Aligned_cols=44 Identities=23% Similarity=0.427 Sum_probs=37.6
Q ss_pred cCCCcCCCceEEEEE-eceEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 5 LPQTEDYNNEFSVIA-ISRSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 5 ~~~~~~~~~~f~i~~-~~ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
.++..+.+|.|.|.+ ..+.|.|+|+|++|+++||.+|+.++...
T Consensus 82 a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 82 VPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp CTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 456677889999987 45689999999999999999999988643
No 169
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=96.20 E-value=0.015 Score=59.96 Aligned_cols=91 Identities=14% Similarity=0.277 Sum_probs=66.1
Q ss_pred CceeeeeeeccCCCceEEEEEEECCEEEEEccCcc-----------CccceEEEecCeEEEEccccCCcceeEEEEeCCc
Q psy2207 210 SQHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASED-----------IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ 278 (305)
Q Consensus 210 ~~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~d-----------~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~ 278 (305)
.++.|.|.+.+.+ +.+++.|=+..|.+-+.... ..-.+.|+|.++.|....+....++.|.|.+.++
T Consensus 444 Li~eG~l~~~~~k--~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~ 521 (1049)
T 3ksy_A 444 FIMEGTLTRVGAK--HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDE 521 (1049)
T ss_dssp CCCEEEEEETTCS--SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSSSCCSEEEECCTTS
T ss_pred EEEeceEEEEccC--ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCccccceEEEEcCCC
Confidence 4677888776533 67777776666666664421 2345678888877765444445678999988766
Q ss_pred eeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 279 DPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 279 ~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
..|.|.|.|.++.+.|+++|+++.
T Consensus 522 ~~~~L~A~S~eeK~~Wi~~I~~~q 545 (1049)
T 3ksy_A 522 NSVIFSAKSAEEKNNWMAALISLQ 545 (1049)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHH
Confidence 689999999999999999998654
No 170
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=96.03 E-value=0.007 Score=47.47 Aligned_cols=37 Identities=19% Similarity=0.297 Sum_probs=33.0
Q ss_pred CceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 12 NNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 12 ~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
.+.|.|.+|+|+|+|.+. ..++++|+++|++++....
T Consensus 106 ~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~ 142 (151)
T 1w1g_A 106 FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRY 142 (151)
T ss_dssp SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHh
Confidence 359999999999999997 8899999999999987644
No 171
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.01 E-value=0.011 Score=53.30 Aligned_cols=41 Identities=12% Similarity=0.303 Sum_probs=35.4
Q ss_pred CCCceEEEEEe-----ceEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Q psy2207 10 DYNNEFSVIAI-----SRSFTLRARSANERLEWIDAIQTAIKENEQ 50 (305)
Q Consensus 10 ~~~~~f~i~~~-----~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~ 50 (305)
..++.|.|... ..+|.|+|.|++||+.|+++|++++.+...
T Consensus 277 ~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 322 (354)
T 2rgn_B 277 GDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQRD 322 (354)
T ss_dssp GCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 45789999873 589999999999999999999999987543
No 172
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=95.97 E-value=0.011 Score=53.85 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=32.9
Q ss_pred CceEEEEE---eceEEEEEeCCHHHHHHHHHHHHHHHHHHHhc
Q psy2207 12 NNEFSVIA---ISRSFTLRARSANERLEWIDAIQTAIKENEQH 51 (305)
Q Consensus 12 ~~~f~i~~---~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~~~ 51 (305)
++.|.|.. ..++|.|+|.|++||+.|+++|++++......
T Consensus 332 ~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~ 374 (385)
T 1txd_A 332 KALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQ 374 (385)
T ss_dssp CEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCC
Confidence 44565554 26899999999999999999999999987654
No 173
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=95.93 E-value=0.06 Score=47.47 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=55.4
Q ss_pred CCceEEEEEEECCEEEEEccCcc------CccceEEEecCeEEEEccccCCcceeEEEEeC----CceeEEEEcCCHHHH
Q psy2207 222 RNWKRYWFVLKDQVMYKYKASED------IKALLSIPVLGYELEALNEQDNFKYVFQLKHQ----GQDPLVFGADNEQSY 291 (305)
Q Consensus 222 ~~wkrrw~vL~~~~L~~y~~~~d------~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~----~~~~~~f~a~s~e~~ 291 (305)
+..+.+++.|=...|.+-+...+ ..-.+.|+|.++.|....+ +.++.|.|... ....|.|.|.|+++.
T Consensus 219 ~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek 296 (311)
T 1nty_A 219 RKGRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVE--GDPCKFALWVGRTPTSDNKIVLKASSIENK 296 (311)
T ss_dssp CCEEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCT--TCTTEEEEEESSSCCTTTCEEEECSSHHHH
T ss_pred cccceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccC--CCCceEEEEeCCCCCCCceEEEECCCHHHH
Confidence 45677888776666666553221 1224568888877763322 34578999862 345699999999999
Q ss_pred HHHHHHHHHHHc
Q psy2207 292 ERWMKAMREATT 303 (305)
Q Consensus 292 ~~Wi~al~~a~~ 303 (305)
+.|+++|+.|+.
T Consensus 297 ~~W~~~i~~~i~ 308 (311)
T 1nty_A 297 QDWIKHIREVIQ 308 (311)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 174
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=95.78 E-value=0.007 Score=46.04 Aligned_cols=37 Identities=16% Similarity=0.380 Sum_probs=34.0
Q ss_pred CCceEEEEEece-EEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAISR-SFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 11 ~~~~f~i~~~~k-sf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
..|.|.|.+.++ .|.|.|.++.+++.|+..|+.++..
T Consensus 94 ~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 94 KDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp CTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 569999999888 9999999999999999999998865
No 175
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=95.72 E-value=0.0017 Score=61.51 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=0.0
Q ss_pred CceeeeeeeccCCCceEEEEEEECCEEEEEccCccC-------------------ccceEEEecCeEEEEccccCCccee
Q psy2207 210 SQHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDI-------------------KALLSIPVLGYELEALNEQDNFKYV 270 (305)
Q Consensus 210 ~~~~G~L~~~~~~~wkrrw~vL~~~~L~~y~~~~d~-------------------~p~~~i~L~~~~v~~~~~~~~~~~~ 270 (305)
.+..|.|.+. +.++.+|+.|=...|.+.+..... .-...|+|.+..|....+..+.+++
T Consensus 253 li~eG~l~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d~~~~~~~ 330 (510)
T 3jzy_A 253 LLHSGKLYKT--KSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTDPSSDEPV 330 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeceEEEc--CCCcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCCCCccccc
Confidence 3556666543 356788888866666665533221 0134567777777654333456789
Q ss_pred EEEEeCCceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 271 FQLKHQGQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 271 F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
|+|.+.. +.|.|.|.|.++...|+++|++|..
T Consensus 331 F~i~~~~-~~~~l~a~s~~ek~~W~~~i~~ai~ 362 (510)
T 3jzy_A 331 FHISHID-RVYTLRTDNINERTAWVQKIKAASE 362 (510)
T ss_dssp ---------------------------------
T ss_pred eeeeccc-eeEEeccCCHHHHHHHHHHHHHHHH
Confidence 9998654 5799999999999999999988754
No 176
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=95.62 E-value=0.071 Score=48.00 Aligned_cols=79 Identities=19% Similarity=0.152 Sum_probs=54.4
Q ss_pred CCceEEEEEEECCEEEEEccCcc---------CccceEEEecCeEEEEccccCCcceeEEEEeC----CceeEEEEcCCH
Q psy2207 222 RNWKRYWFVLKDQVMYKYKASED---------IKALLSIPVLGYELEALNEQDNFKYVFQLKHQ----GQDPLVFGADNE 288 (305)
Q Consensus 222 ~~wkrrw~vL~~~~L~~y~~~~d---------~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~----~~~~~~f~a~s~ 288 (305)
+..+.+++.|=...|.+-+...+ ..-...|+|..+.|..... +.++.|.|.+. +...|.|.|.|.
T Consensus 226 ~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~ 303 (354)
T 2rgn_B 226 SRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQ--GDPCRFALTSRGPEGGIQRYVLQAADP 303 (354)
T ss_dssp CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGG--GCTTEEEEEEECSSSCEEEEEEEESSH
T ss_pred CCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccC--CCCceEEEEecCCCCCceEEEEECCCH
Confidence 35677887776666666554321 1224567888777754322 33578999863 246799999999
Q ss_pred HHHHHHHHHHHHHH
Q psy2207 289 QSYERWMKAMREAT 302 (305)
Q Consensus 289 e~~~~Wi~al~~a~ 302 (305)
++.+.|+++|.+|+
T Consensus 304 ~ek~~W~~~i~~ai 317 (354)
T 2rgn_B 304 AISQAWIKHVAQIL 317 (354)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998875
No 177
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=95.61 E-value=0.011 Score=51.54 Aligned_cols=36 Identities=17% Similarity=0.132 Sum_probs=31.3
Q ss_pred CCCceEEEEEec------eEEEEEeCCHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAIS------RSFTLRARSANERLEWIDAIQTAI 45 (305)
Q Consensus 10 ~~~~~f~i~~~~------ksf~~~a~s~~ek~~W~~~i~~ai 45 (305)
..+++|.|.+++ ++|.|.|+|++|+++||.+|+.|.
T Consensus 234 ~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 234 PTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp SSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 356899999865 569999999999999999998775
No 178
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=95.57 E-value=0.071 Score=47.97 Aligned_cols=78 Identities=12% Similarity=0.138 Sum_probs=53.3
Q ss_pred CceEEEEEEECCEEEEEccCccC----------ccceEEEecCeEEEEccccCCcceeEEEEeC-CceeEEEEcCCHHHH
Q psy2207 223 NWKRYWFVLKDQVMYKYKASEDI----------KALLSIPVLGYELEALNEQDNFKYVFQLKHQ-GQDPLVFGADNEQSY 291 (305)
Q Consensus 223 ~wkrrw~vL~~~~L~~y~~~~d~----------~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~-~~~~~~f~a~s~e~~ 291 (305)
.++.+++.|=+..|.+-+..... .-...|+|..+.|.... .+.++.|+|... ....|.|.|.|+++.
T Consensus 236 k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~--~~~~~~F~i~~~~~~~~~~l~a~s~~ek 313 (353)
T 1kz7_A 236 KPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENV--KGDTKKFEIWYNAREEVYIIQAPTPEIK 313 (353)
T ss_dssp SCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCB--TTBTTEEEEEETTTTEEEEEECSSHHHH
T ss_pred CcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcC--CCCCceEEEEECCCCcEEEEECCCHHHH
Confidence 35778877766666555543211 12355777777665332 234578999874 346799999999999
Q ss_pred HHHHHHHHHHH
Q psy2207 292 ERWMKAMREAT 302 (305)
Q Consensus 292 ~~Wi~al~~a~ 302 (305)
+.|+++|++|+
T Consensus 314 ~~W~~~i~~ai 324 (353)
T 1kz7_A 314 AAWVNAIRKVL 324 (353)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 179
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=95.43 E-value=0.23 Score=48.74 Aligned_cols=92 Identities=15% Similarity=0.242 Sum_probs=64.0
Q ss_pred CCCceeeeeeecc---CCCceEEEEEEECCEEEEEccCccCccceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEE
Q psy2207 208 SGSQHSGWLHKKS---GRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFG 284 (305)
Q Consensus 208 ~~~~~~G~L~~~~---~~~wkrrw~vL~~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~ 284 (305)
..+++.||+.+.+ ...|++|++.|..+.+.+.... ..+...+.+....-+.... ......|.+...+.+.|++.
T Consensus 557 ~~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~--~~~~~l~~~~~v~~v~k~~-i~~~~~l~~~~k~~k~f~~~ 633 (689)
T 3v5w_A 557 KDCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEG--EAPQSLLTMEEIQSVEETQ-IKERKCLLLKIRGGKQFILQ 633 (689)
T ss_dssp SCCCEEEEEEEC-------CEEEEEEEETTEEEEECTT--SCCCEEEEGGGEEEEEEEE-SSSCEEEEEEETTTEEEEEE
T ss_pred CcceeecccccCCCcccchhhhhccccCCCcccccccC--CCCcceeeeccccccccCc-CCCCcceeeeecCCcEEEEE
Confidence 4467899999987 5789999999998888776543 2334445554433222211 22336888888889999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q psy2207 285 ADNEQSYERWMKAMREAT 302 (305)
Q Consensus 285 a~s~e~~~~Wi~al~~a~ 302 (305)
++++.++.+|..+|+.+-
T Consensus 634 t~~~~~~~~W~~~i~~~~ 651 (689)
T 3v5w_A 634 CDSDPELVQWKKELRDAY 651 (689)
T ss_dssp CSSHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHH
Confidence 999999999999998654
No 180
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.43 E-value=0.027 Score=43.37 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=32.4
Q ss_pred cCCCceEEEEEec----eEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAIS----RSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 9 ~~~~~~f~i~~~~----ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
...++.|.|..|. |.|.|.++|+++..+||++++.|-.
T Consensus 71 ~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 71 SGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp GGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 3567777888876 9999999999999999999997653
No 181
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=94.57 E-value=0.23 Score=44.95 Aligned_cols=55 Identities=16% Similarity=0.227 Sum_probs=40.3
Q ss_pred ceEEEecCeEEEEccccCC-cceeEEEEeC-------CceeEEEEcCCHHHHHHHHHHHHHHH
Q psy2207 248 LLSIPVLGYELEALNEQDN-FKYVFQLKHQ-------GQDPLVFGADNEQSYERWMKAMREAT 302 (305)
Q Consensus 248 ~~~i~L~~~~v~~~~~~~~-~~~~F~l~~~-------~~~~~~f~a~s~e~~~~Wi~al~~a~ 302 (305)
...|+|.+..|...++.+. ....|+|.+. ....|.|+|.|.++.+.|+++|.+|+
T Consensus 303 k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i 365 (377)
T 1foe_A 303 RHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSIL 365 (377)
T ss_dssp EEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHh
Confidence 4678898888875433322 2245888742 24679999999999999999998876
No 182
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=94.34 E-value=0.0063 Score=47.15 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=32.1
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...+-+.+-|.++|..||+.|+.|+..
T Consensus 35 ~N~~CaDCga~----~P~WaS~n~GvfiC~~CsgiHR~LG~h 72 (138)
T 2owa_A 35 ENRTCFDCESR----NPTWLSLSFAVFICLNCSSDHRKMGVH 72 (138)
T ss_dssp GGGBCTTTCCB----SCCEEETTTTEEECHHHHHHHHTTCTT
T ss_pred CCCcCCCCcCC----CCCeEEecCCEEEhHhhhHHHhCCCCC
Confidence 36789999985 466778899999999999999999753
No 183
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=94.30 E-value=0.0053 Score=47.78 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=31.6
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEY 123 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~ 123 (305)
+..|++|+.+ ...+-+.+-|.++|..||+.|+.|+.
T Consensus 25 N~~CaDCg~~----~P~WaS~n~GvfiC~~CsgiHR~LG~ 60 (140)
T 2olm_A 25 NRKCFDCDQR----GPTYVNMTVGSFVCTSCSGSLRGLNP 60 (140)
T ss_dssp GGSCTTTCSS----CCCEEETTTTEEECHHHHHHHTTSSS
T ss_pred CCcCCCCCCC----CCCceeeccCEEEchhccchhccCCC
Confidence 6689999985 56777889999999999999999975
No 184
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=94.25 E-value=0.0055 Score=47.31 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=31.4
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEY 123 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~ 123 (305)
+..|++|+.+ ...+.+.+-|.++|..||+.|+.|+.
T Consensus 27 N~~CaDCg~~----~P~WaS~n~GvfiC~~CsgiHR~lG~ 62 (134)
T 2iqj_A 27 NKFCADCQSK----GPRWASWNIGVFICIRCAGIHRNLGV 62 (134)
T ss_dssp GGBCTTTCCB----SCCEEETTTTEEECHHHHHHHHHHCT
T ss_pred CCcCCcCcCC----CCCeEEecCCEEEhHhhhHHHhcCCC
Confidence 6789999995 46677888999999999999999975
No 185
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=94.21 E-value=0.2 Score=43.19 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=42.4
Q ss_pred ceEEEecCeEEEEc-cccCCcceeEEEEeC-CceeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 248 LLSIPVLGYELEAL-NEQDNFKYVFQLKHQ-GQDPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 248 ~~~i~L~~~~v~~~-~~~~~~~~~F~l~~~-~~~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
.+.|+|.-+.+... ...+.+.+.|+|... +..+.+++|+|.+++.+|+++|..++.
T Consensus 205 ~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp CEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 45778877666632 122346789999876 445689999999999999999998864
No 186
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.90 E-value=0.0077 Score=47.23 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=32.1
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...+-+.+-|.++|..|++.|+.|+..
T Consensus 28 ~N~~CaDCga~----~P~WaS~n~GvfiC~~CsgiHR~LG~h 65 (149)
T 2crw_A 28 TNKVCFDCGAK----NPSWASITYGVFLCIDCSGSHRSLGVH 65 (149)
T ss_dssp TTSBCSSSCCB----SCCCEETTTTEECCHHHHHHHHHHCTT
T ss_pred CCCcCCCCcCC----CCCcEEeccCEEEchhcchhhccCCCC
Confidence 36789999985 566778899999999999999999753
No 187
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=93.77 E-value=0.0093 Score=47.17 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...+.+.+-|.++|..||+.|+.|+..
T Consensus 21 ~N~~CaDCga~----~P~WaS~nlGvflCi~CSGiHR~LG~h 58 (163)
T 3sub_A 21 SNNKCFDCGIS----NPDWVSVNHGIFLCINCSGVHRSLGVH 58 (163)
T ss_dssp GGGBCTTTCCB----SCCEEETTTTEEECHHHHHHHHHTCTT
T ss_pred CCCccccCCCC----CCCeEEecCCeeEHHhhhHHhcCCCCC
Confidence 36689999995 556777888999999999999999754
No 188
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.70 E-value=0.0073 Score=47.04 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=31.7
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEY 123 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~ 123 (305)
.+..|++|+.+ ...+.+.+-|.++|..||+.|+.|+.
T Consensus 28 ~N~~CaDCga~----~P~WaS~n~GvfiC~~CsgiHR~LG~ 64 (141)
T 2crr_A 28 DNKYCADCEAK----GPRWASWNIGVFICIRCAGIHRNLGV 64 (141)
T ss_dssp GGSSCSSSCCS----SCCSEETTTTEECCHHHHHHHHHHCT
T ss_pred cCCcCCCCCCC----CCCeEEeccCeEEhhhhhHhHhcCCC
Confidence 36789999995 56677888999999999999999974
No 189
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=93.51 E-value=0.065 Score=55.32 Aligned_cols=41 Identities=27% Similarity=0.516 Sum_probs=35.4
Q ss_pred CCcCCCceEEEEEece-EEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 7 QTEDYNNEFSVIAISR-SFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 7 ~~~~~~~~f~i~~~~k-sf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
+.+..+|+|.|.+... +|.|+|+|++||+.|+++|+.+...
T Consensus 506 d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 506 DTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp CSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 4456789999998764 9999999999999999999987654
No 190
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.06 E-value=0.047 Score=37.37 Aligned_cols=50 Identities=22% Similarity=0.551 Sum_probs=39.7
Q ss_pred CCCccccccccccc-ccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 82 SRVSMCQRCTSVFT-VTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 82 ~~~~~C~~C~~~f~-~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
.....|+.|..+|+ ++++-.-|+.|-.-||.+|-.+... ..=.|..|++.
T Consensus 23 ~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~~~-------~~W~C~VC~k~ 73 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQESN-------GTWRCKVCSGP 73 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEECST-------TCEEEHHHHSS
T ss_pred CCccchhhhCccccccccCCCcCcccChhhcccccccCCC-------CCEEEeeCchh
Confidence 34679999999999 4678899999999999999876421 45677777653
No 191
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=92.93 E-value=0.015 Score=45.33 Aligned_cols=38 Identities=18% Similarity=0.323 Sum_probs=31.7
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...+-+.+-|.++|..||+.|+.|+..
T Consensus 37 ~N~~CaDCga~----~P~WaS~nlGvfiC~~CSgiHR~LG~h 74 (147)
T 3dwd_A 37 ENNVCFECGAF----NPQWVSVTYGIWICLECSGRHRGLGVH 74 (147)
T ss_dssp TTTBCTTTCCB----SCCEEETTTTEEECHHHHHHHHHHCTT
T ss_pred CCCccCCCCCC----CCCeEEecccEeEhHhhChHHhcCCCC
Confidence 36789999995 456677888999999999999998753
No 192
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=92.88 E-value=0.013 Score=45.62 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=31.1
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEY 123 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~ 123 (305)
+..|++|+.+ ...+-+.+-|.++|..||+.|+.|+.
T Consensus 37 N~~CaDCga~----~P~WaS~n~GvfiC~~CsgiHR~LG~ 72 (144)
T 2p57_A 37 NKACFDCGAK----NPSWASITYGVFLCIDCSGVHRSLGV 72 (144)
T ss_dssp GGBCTTTCCB----SCCEEEGGGTEEECHHHHHHHHHHCT
T ss_pred CCcCCCCcCC----CCCeEEeccCEEEhhhchHHHcCCCC
Confidence 5689999985 56677888999999999999999875
No 193
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.73 E-value=0.23 Score=37.61 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=31.9
Q ss_pred CCceEEEEEeceEEEEEeCC---------------HHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAISRSFTLRARS---------------ANERLEWIDAIQTAIKE 47 (305)
Q Consensus 11 ~~~~f~i~~~~ksf~~~a~s---------------~~ek~~W~~~i~~ai~~ 47 (305)
.+|+|+|.|...+|.+.+.. .+....|..+|++|+.-
T Consensus 73 ~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALmP 124 (129)
T 2d9z_A 73 NPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMS 124 (129)
T ss_dssp CCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhccC
Confidence 46999999999999998743 68899999999999853
No 194
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=91.79 E-value=0.67 Score=37.21 Aligned_cols=56 Identities=13% Similarity=0.134 Sum_probs=42.2
Q ss_pred ceEEEecCeEEEEc-cccCCcceeEEEEeCCc-eeEEEEcCCHHHHHHHHHHHHHHHc
Q psy2207 248 LLSIPVLGYELEAL-NEQDNFKYVFQLKHQGQ-DPLVFGADNEQSYERWMKAMREATT 303 (305)
Q Consensus 248 ~~~i~L~~~~v~~~-~~~~~~~~~F~l~~~~~-~~~~f~a~s~e~~~~Wi~al~~a~~ 303 (305)
...|||.-+.|... ...+.....|+|...++ .+-+|.|.|..++..|+++|...+.
T Consensus 120 ~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp CEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred ceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 56899977777631 11223568999987544 4679999999999999999987653
No 195
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=90.46 E-value=0.26 Score=37.61 Aligned_cols=38 Identities=18% Similarity=0.409 Sum_probs=32.2
Q ss_pred CCceEEEEEec--eEEEEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAIS--RSFTLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 11 ~~~~f~i~~~~--ksf~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
...+|.|+-.. +++.|.|.|++|.+.|+.+|+.-+...
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 46799999976 699999999999999999999877553
No 196
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=90.05 E-value=0.32 Score=41.64 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=30.9
Q ss_pred CceEEEEEece------EEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 12 NNEFSVIAISR------SFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 12 ~~~f~i~~~~k------sf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
+++|.|..+.. .+.|.|++++++++|+.+|..|.-.
T Consensus 200 ~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~g 241 (256)
T 3hk0_A 200 DHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKYG 241 (256)
T ss_dssp SEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 68999996544 4999999999999999999988754
No 197
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=89.75 E-value=0.051 Score=47.69 Aligned_cols=38 Identities=21% Similarity=0.319 Sum_probs=32.2
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...|-+.+.|.++|..||+.|+.|+..
T Consensus 41 ~n~~c~dc~~~----~p~w~s~~~g~~~c~~cs~~hr~lg~~ 78 (301)
T 2b0o_E 41 GNSQCCDCGAA----DPTWLSTNLGVLTCIQCSGVHRELGVR 78 (301)
T ss_dssp TTTBCTTTCCB----SCCEEETTTTEEECHHHHHHHHHHCTT
T ss_pred CCCcCCCCCCC----CCCeEEeecCeEEcHHHHHHHHhhCCC
Confidence 36789999995 567778899999999999999998753
No 198
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=89.37 E-value=0.055 Score=48.19 Aligned_cols=38 Identities=18% Similarity=0.323 Sum_probs=32.2
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...+.+.+-|.++|..||+.|+.|+..
T Consensus 36 ~n~~c~dc~~~----~~~~~~~~~~~~~c~~c~~~hr~~~~~ 73 (329)
T 3o47_A 36 ENNVCFECGAF----NPQWVSVTYGIWICLECSGRHRGLGVH 73 (329)
T ss_dssp TTTBCTTTCCB----SCCEEEGGGTEEECHHHHHHHHHHCTT
T ss_pred CCCcCCCCCCC----CCCeEEecCCEEEChhhhhhhcccCCC
Confidence 46789999995 456788899999999999999998753
No 199
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=89.14 E-value=0.46 Score=33.16 Aligned_cols=30 Identities=23% Similarity=0.645 Sum_probs=24.1
Q ss_pred CCCcccccccccccccccccccccccceeccC
Q psy2207 82 SRVSMCQRCTSVFTVTFRRHHCRACGKVVCGP 113 (305)
Q Consensus 82 ~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~ 113 (305)
.....|..|.+.-.++ ..-+|| ||.+||+.
T Consensus 23 ~~~~rC~~C~kkvgl~-~~f~Cr-Cg~~FC~~ 52 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLA-TSFECR-CGNNFCAS 52 (85)
T ss_dssp CCCCBCSSSCCBCSSS-SCEECT-TCCEECTT
T ss_pred ccCccchhhCCeeccc-CCeEcC-CCCEeccc
Confidence 3457899999988875 357897 99999965
No 200
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=88.74 E-value=0.25 Score=37.26 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=30.4
Q ss_pred CCCceEEEEEeceEEEEEeC---C--------HHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAISRSFTLRAR---S--------ANERLEWIDAIQTAIK 46 (305)
Q Consensus 10 ~~~~~f~i~~~~ksf~~~a~---s--------~~ek~~W~~~i~~ai~ 46 (305)
..+|+|+|.|..++|.+.+. . .+....|..+|++|+.
T Consensus 72 ~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 72 TNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM 119 (125)
T ss_dssp SCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred CCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhcc
Confidence 35699999999999999874 1 2568899999999874
No 201
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=88.66 E-value=0.29 Score=32.21 Aligned_cols=27 Identities=33% Similarity=0.866 Sum_probs=22.5
Q ss_pred CcccccccccccccccccccccccceeccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~ 113 (305)
...|..|.+...++ .-.|| ||.+||+.
T Consensus 15 ~~rC~~C~kkvgl~--~f~Cr-Cg~~FC~~ 41 (64)
T 1wfh_A 15 PNRCTVCRKRVGLT--GFMCR-CGTTFCGS 41 (64)
T ss_dssp CCCCTTTCCCCCTT--CEECS-SSCEECTT
T ss_pred CCcChhhCCccCcc--CEEee-cCCEeccc
Confidence 46899999988776 67895 99999975
No 202
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=88.51 E-value=0.56 Score=31.77 Aligned_cols=27 Identities=33% Similarity=0.861 Sum_probs=22.6
Q ss_pred CcccccccccccccccccccccccceeccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~ 113 (305)
...|..|.+...++ .-.|| ||.+||+.
T Consensus 25 ~nRC~~CrKkvgL~--gf~Cr-Cg~~FCs~ 51 (74)
T 1wfl_A 25 KNRCFMCRKKVGLT--GFDCR-CGNLFCGL 51 (74)
T ss_dssp TTBCSSSCCBCGGG--CEECT-TSCEECSS
T ss_pred CCcChhhCCccccc--CeecC-CCCEechh
Confidence 56899999988776 47899 99999964
No 203
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=87.45 E-value=0.78 Score=31.05 Aligned_cols=30 Identities=33% Similarity=0.825 Sum_probs=24.1
Q ss_pred cCCCcccccccccccccccccccccccceeccC
Q psy2207 81 DSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGP 113 (305)
Q Consensus 81 d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~ 113 (305)
......|..|.....++ .-.| .||.+||..
T Consensus 22 k~~~~RC~~C~kkvgL~--~f~C-rCg~~FCs~ 51 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVT--GFKC-RCGSTFCGT 51 (74)
T ss_dssp TCCCCBCSSSCCBCTTT--CEEC-TTSCEECTT
T ss_pred cccCccchhhcCccccc--ceEe-ccCCEeccc
Confidence 34567899999988876 6889 599999965
No 204
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=86.95 E-value=0.1 Score=47.35 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=32.4
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
.+..|++|+.+ ...+-+.+-|.++|..||+.|+.|+..
T Consensus 44 ~n~~c~dc~~~----~p~w~s~~~g~~~c~~c~~~hr~lg~~ 81 (368)
T 3jue_A 44 GNAQCCDCREP----APEWASINLGVTLCIQCSGIHRSLGVH 81 (368)
T ss_dssp TTTBCTTTCCB----SCCEEETTTTEEECHHHHHHHHHHCTT
T ss_pred CcCcCCCCCCC----CCCeEEecCCeEEcHhHHHHHhccCCC
Confidence 47799999995 566778899999999999999998753
No 205
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=86.43 E-value=0.64 Score=40.32 Aligned_cols=37 Identities=11% Similarity=0.068 Sum_probs=31.1
Q ss_pred CCceEEEEEec------eEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAIS------RSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 11 ~~~~f~i~~~~------ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
-+++|.|..++ ..++|.|++++++..||.+|.-|.-.
T Consensus 225 t~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~g 267 (281)
T 4gmv_A 225 TDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYG 267 (281)
T ss_dssp CSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhhC
Confidence 36799999754 36999999999999999999887643
No 206
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=86.34 E-value=4.1 Score=30.34 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=59.7
Q ss_pred CCceeeeeeeccC-CCceEEEEEEECCEEEEEccCc----c-CccceEEEecCeEEEEccccCCcceeEEEEeCC-ceeE
Q psy2207 209 GSQHSGWLHKKSG-RNWKRYWFVLKDQVMYKYKASE----D-IKALLSIPVLGYELEALNEQDNFKYVFQLKHQG-QDPL 281 (305)
Q Consensus 209 ~~~~~G~L~~~~~-~~wkrrw~vL~~~~L~~y~~~~----d-~~p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~-~~~~ 281 (305)
..++.|.+..... +.-+.|++-|=+..|.+-+... + ..-...|.+..+.+...... +.+..|+|...+ ...|
T Consensus 9 ~Ll~q~~f~V~~~~~k~~eR~vFLFe~~ilf~K~~~~~~~~~Y~~K~~ikl~~~~lte~~~~-~d~~kFeiw~~~~~~~~ 87 (119)
T 1fho_A 9 RIIRHDAFQVWEGDEPPKLRYVFLFRNKIMFTEQDASTSPPSYTHYSSIRLDKYNIRQHTTD-EDTIVLQPQEPGLPSFR 87 (119)
T ss_dssp CSSEEEEEEECSTTCSCEEEEEEEETTEEEEEEECCSSSSCCCSSCCEEESSSCEEEEECTT-CCEEEEECCSTTCCCBC
T ss_pred CccccCceEEEeCCCCcceEEEEEecCcEEEEEEecCCCCCcEEEeeEEeeceeEEEecCCC-CCCcEEEEccCCCCceE
Confidence 3456677766542 3445666666666666666431 1 12345788888888754331 234679997654 3467
Q ss_pred EE--EcCCHH-HHHHHHHHHHH
Q psy2207 282 VF--GADNEQ-SYERWMKAMRE 300 (305)
Q Consensus 282 ~f--~a~s~e-~~~~Wi~al~~ 300 (305)
.+ .|.|.+ ..+.|++.|++
T Consensus 88 il~~qA~s~e~~K~~Wv~~I~~ 109 (119)
T 1fho_A 88 IKPKDFETSEYVRKAWLRDIAE 109 (119)
T ss_dssp CCCCSSSSCSHHHHHHHHHHHT
T ss_pred EEeeecCCcHHHHHHHHHHHHH
Confidence 77 899999 99999999976
No 207
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=84.66 E-value=0.74 Score=42.32 Aligned_cols=39 Identities=28% Similarity=0.394 Sum_probs=31.3
Q ss_pred CCCceEEEEEeceEE----EEEeCCHHHHHHHHHHHHHHHHHH
Q psy2207 10 DYNNEFSVIAISRSF----TLRARSANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 10 ~~~~~f~i~~~~ksf----~~~a~s~~ek~~W~~~i~~ai~~~ 48 (305)
..+|.|.|.+++... .+.+++++|+++|+.+|+.++...
T Consensus 68 ~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 68 PRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp SSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred CCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 447899998765433 689999999999999999987543
No 208
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=84.35 E-value=0.68 Score=30.46 Aligned_cols=27 Identities=30% Similarity=0.806 Sum_probs=22.3
Q ss_pred CcccccccccccccccccccccccceeccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~ 113 (305)
...|..|.+...++ .-.| .||.+||+.
T Consensus 15 ~~rC~~C~kkvgl~--~f~C-rCg~~FC~~ 41 (64)
T 1wg2_A 15 NNRCFSCNKKVGVM--GFKC-KCGSTFCGS 41 (64)
T ss_dssp SCSCTTTCCCCTTS--CEEC-TTSCEECSS
T ss_pred CCcChhhCCccccc--CeEe-ecCCEeccc
Confidence 46899999987766 6789 599999965
No 209
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=84.11 E-value=0.17 Score=47.59 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=30.0
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEY 123 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~ 123 (305)
+..|++|+.+- ..+.+.+-|.++|-.||+.|+.|+.
T Consensus 23 n~~c~dc~~~~----p~w~s~~~~~~~c~~c~~~hr~lg~ 58 (497)
T 3lvq_E 23 NSQCCDCGAAD----PTWLSTNLGVLTCIQCSGVHRELGV 58 (497)
T ss_dssp TTBCTTTCCBS----CCEEETTTTEEECHHHHHHHHHHCT
T ss_pred CCcccCCCCCC----CCEEEechhHHhHHhhHHHHHhhcc
Confidence 67899999854 4566778899999999999999864
No 210
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=83.65 E-value=1.1 Score=28.70 Aligned_cols=53 Identities=23% Similarity=0.533 Sum_probs=39.1
Q ss_pred CCCcccccccc-cccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 82 SRVSMCQRCTS-VFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 82 ~~~~~C~~C~~-~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
++...|.+|.+ +|.. ---|.|..|-.-+|++|.++ .+|. .++-.=||.-|..+
T Consensus 7 ~d~~~C~iC~KTKFAD-G~Gh~C~yCk~r~CaRCGg~-v~lr--~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 7 GDAPTCGICHKTKFAD-GCGHNCSYCQTKFCARCGGR-VSLR--SNKVMWVCNLCRKQ 60 (62)
T ss_dssp SCCCCCSSSSCSCCCS-SCCEEBTTTCCEECTTSEEE-EESS--TTCEEEEEHHHHHH
T ss_pred CCcchhhhhccceecc-CCCccccccCCeeecccCCE-eeec--CCeEEEEehhhhhc
Confidence 34668999977 4542 23489999999999999985 4453 46777788888664
No 211
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=82.94 E-value=13 Score=30.30 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=28.6
Q ss_pred eeEEEEeCCceeEEEEcCCHHHHHHHHHHHHH
Q psy2207 269 YVFQLKHQGQDPLVFGADNEQSYERWMKAMRE 300 (305)
Q Consensus 269 ~~F~l~~~~~~~~~f~a~s~e~~~~Wi~al~~ 300 (305)
..|.|....+..+.|.|+|+++...|++.|+.
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~ 147 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNA 147 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHH
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHH
Confidence 68999987767899999999999999999864
No 212
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=82.54 E-value=0.11 Score=39.19 Aligned_cols=37 Identities=8% Similarity=0.042 Sum_probs=28.6
Q ss_pred CceEEEEEec--eEEEE--EeCCHH-HHHHHHHHHHHHHHHH
Q psy2207 12 NNEFSVIAIS--RSFTL--RARSAN-ERLEWIDAIQTAIKEN 48 (305)
Q Consensus 12 ~~~f~i~~~~--ksf~~--~a~s~~-ek~~W~~~i~~ai~~~ 48 (305)
+..|+|-.+. ..|.+ +|.|.+ .|+.|++.|.++++..
T Consensus 73 ~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 73 TIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp EEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred CcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 4668885544 46677 999999 9999999999866554
No 213
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=82.40 E-value=0.21 Score=43.07 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=30.6
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYK 124 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~ 124 (305)
+..|.+|+.+- ..+..-+-|..+|..||+.|+.|+..
T Consensus 17 n~~c~dc~~~~----p~w~s~~~g~~~c~~c~~~hr~lg~~ 53 (278)
T 1dcq_A 17 NDVCCDCGAPD----PTWLSTNLGILTCIECSGIHRELGVH 53 (278)
T ss_dssp TTBCTTTCCBS----CCEEETTTTEEECHHHHHHHHHHCTT
T ss_pred CCcCCCCCCCC----CCeEEecCCeEEcHHHHHHHhhcCCC
Confidence 56899999954 45667788999999999999998754
No 214
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.95 E-value=0.99 Score=29.98 Aligned_cols=31 Identities=23% Similarity=0.566 Sum_probs=24.5
Q ss_pred CCCccccccccccccccc-ccccccccceeccC
Q psy2207 82 SRVSMCQRCTSVFTVTFR-RHHCRACGKVVCGP 113 (305)
Q Consensus 82 ~~~~~C~~C~~~f~~~~r-rhhCr~cg~v~C~~ 113 (305)
.....|..|.+.-.++.. --.| .||.+||+.
T Consensus 13 ~~~~rC~~C~kk~gL~~~egf~C-rCg~~FC~~ 44 (67)
T 1x4w_A 13 KSRRRCFQCQTKLELVQQELGSC-RCGYVFCML 44 (67)
T ss_dssp SCTTBCSSSCCBCCHHHHHHHCC-SSSCCCCTT
T ss_pred ccCCcchhhCCeecccccCceEe-cCCCEehhc
Confidence 346789999998887654 3689 799999965
No 215
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=76.89 E-value=1.4 Score=27.32 Aligned_cols=36 Identities=19% Similarity=0.408 Sum_probs=26.1
Q ss_pred CCcccccccccccccccccccccccceeccCccCCe
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
....|.+|...|...........||.+||..|....
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~ 39 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEM 39 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHH
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHH
Confidence 345799999988543334445669999999998654
No 216
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=76.59 E-value=0.4 Score=31.13 Aligned_cols=32 Identities=22% Similarity=0.631 Sum_probs=25.6
Q ss_pred cccccccccccccccccccccccceeccCccCC
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
..|..|..+|.... +..|..|+.+||..|=.+
T Consensus 16 ~~C~~C~~~~~~~~-~y~C~~C~~~FC~dCD~f 47 (59)
T 1z60_A 16 RFCYGCQGELKDQH-VYVCAVCQNVFCVDCDVF 47 (59)
T ss_dssp CEETTTTEECTTSE-EECCTTTTCCBCHHHHHT
T ss_pred CcccccCcccCCCc-cEECCccCcCcccchhHH
Confidence 46999999996432 478999999999988654
No 217
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=75.64 E-value=11 Score=28.08 Aligned_cols=41 Identities=15% Similarity=0.261 Sum_probs=35.3
Q ss_pred cCCCceEEEEEec------eEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAIS------RSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 9 ~~~~~~f~i~~~~------ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
.+.|+.|.|+--. |.|-|.|.|++|..+-+..|+..++...
T Consensus 71 ~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y~ 117 (121)
T 3ulb_A 71 KRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAYR 117 (121)
T ss_dssp SSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHhc
Confidence 5788999988744 9999999999999999999998877643
No 218
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=75.20 E-value=1.3 Score=29.80 Aligned_cols=29 Identities=21% Similarity=0.693 Sum_probs=21.0
Q ss_pred Ccccccccccccccc-cccccccccc-eecc
Q psy2207 84 VSMCQRCTSVFTVTF-RRHHCRACGK-VVCG 112 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~-rrhhCr~cg~-v~C~ 112 (305)
.-.|..|+..|.+.. ..-+|+.||. ++-+
T Consensus 28 ~Y~C~~CG~~~e~~~~d~irCp~CG~RILyK 58 (70)
T 1twf_L 28 KYICAECSSKLSLSRTDAVRCKDCGHRILLK 58 (70)
T ss_dssp CEECSSSCCEECCCTTSTTCCSSSCCCCCBC
T ss_pred EEECCCCCCcceeCCCCCccCCCCCceEeEe
Confidence 347999999998653 3468888887 5443
No 219
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.32 E-value=0.85 Score=27.94 Aligned_cols=30 Identities=40% Similarity=0.907 Sum_probs=24.4
Q ss_pred cCCCccccccccccccc--cccccccccccee
Q psy2207 81 DSRVSMCQRCTSVFTVT--FRRHHCRACGKVV 110 (305)
Q Consensus 81 d~~~~~C~~C~~~f~~~--~rrhhCr~cg~v~ 110 (305)
|.....|..|...|.++ .|+|-|..||..|
T Consensus 9 ~~~~~~CPrCn~~f~~~~sLr~HmkycCp~~v 40 (49)
T 2e72_A 9 DGGRKICPRCNAQFRVTEALRGHMCYCCPEMV 40 (49)
T ss_dssp CSSCCCCTTTCCCCSSHHHHHHHHHHHCTTTC
T ss_pred cCCceeCCcccccccchHHHHhhhhhcCcchh
Confidence 45677899999999965 5789998888765
No 220
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=73.17 E-value=2.1 Score=26.48 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=24.9
Q ss_pred CcccccccccccccccccccccccceeccCccCCe
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
...|.+|...|...........||.+||..|....
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w 39 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMW 39 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHT
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHH
Confidence 45799999988653333333369999999998654
No 221
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=73.05 E-value=1.7 Score=26.53 Aligned_cols=24 Identities=29% Similarity=0.660 Sum_probs=18.1
Q ss_pred cccccccccccc----ccccccccccce
Q psy2207 86 MCQRCTSVFTVT----FRRHHCRACGKV 109 (305)
Q Consensus 86 ~C~~C~~~f~~~----~rrhhCr~cg~v 109 (305)
.|+.|+..|+.. ..--+|..||.-
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGYK 32 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCCS
T ss_pred EeeccCCCccHHHHhhCCCcccCccCcE
Confidence 699999999843 345788888854
No 222
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=72.82 E-value=1.2 Score=30.02 Aligned_cols=51 Identities=18% Similarity=0.399 Sum_probs=33.1
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
...|..|...|..-.. -.||.+||..|......-..........|..|-..
T Consensus 12 ~~~C~IC~~~~~~p~~----l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~ 62 (79)
T 2egp_A 12 EVTCPICLELLTEPLS----LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGIS 62 (79)
T ss_dssp CCEETTTTEECSSCCC----CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCC
T ss_pred CCCCcCCCcccCCeeE----CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCc
Confidence 4579999998753211 36999999999987654322222345677777443
No 223
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.82 E-value=5.1 Score=27.05 Aligned_cols=50 Identities=18% Similarity=0.371 Sum_probs=30.2
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
...|..|...|..... ..||.+||..|......-.. .......|..|-..
T Consensus 19 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 19 EVTCPICLELLTQPLS----LDCGHSFCQACLTANHKKSM-LDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCTTTCSCCSSCBC----CSSSCCBCTTHHHHHHHHHH-HTTSCCCCTTTCCS
T ss_pred CCCCCCCCcccCCcee----CCCCCHHHHHHHHHHHHHhh-cCCCCCcCCCCCCc
Confidence 4589999998753211 26999999999865432210 01124567666443
No 224
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=66.71 E-value=2.3 Score=26.61 Aligned_cols=24 Identities=29% Similarity=0.768 Sum_probs=17.2
Q ss_pred Ccccccccccccccccccccccccce
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKV 109 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v 109 (305)
...|+.|+.. .-.+.+.|+.||..
T Consensus 14 k~iCpkC~a~--~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 14 KYVCLRCGAT--NPWGAKKCRKCGYK 37 (51)
T ss_dssp EEECTTTCCE--ECTTCSSCSSSSSC
T ss_pred CccCCCCCCc--CCCCceecCCCCCc
Confidence 3468888886 44567888888765
No 225
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=66.27 E-value=3.6 Score=28.81 Aligned_cols=40 Identities=25% Similarity=0.643 Sum_probs=27.1
Q ss_pred eecCCCcccccccccccccc---cccccccccceeccCccCCe
Q psy2207 79 IPDSRVSMCQRCTSVFTVTF---RRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 79 ~~d~~~~~C~~C~~~f~~~~---rrhhCr~cg~v~C~~Cs~~~ 118 (305)
+.......|++|+..-++.. --..|+.|+.-||..|-.+-
T Consensus 11 ~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYE 53 (93)
T 1weo_A 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYE 53 (93)
T ss_dssp CSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHH
T ss_pred ccccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHH
Confidence 45566789999999766542 23678888877775555443
No 226
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=65.98 E-value=54 Score=32.71 Aligned_cols=75 Identities=7% Similarity=-0.035 Sum_probs=47.4
Q ss_pred eEEEEEEE--CCEEEEEccCccCccceEEEecCeEEEEcccc---------------CC------cceeEEEEeCCc---
Q psy2207 225 KRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEALNEQ---------------DN------FKYVFQLKHQGQ--- 278 (305)
Q Consensus 225 krrw~vL~--~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~~~---------------~~------~~~~F~l~~~~~--- 278 (305)
+.+.|.|. +..|++....++. ...|.|..+.-+..... .+ ...+|.|++...
T Consensus 39 ~~~~f~lD~d~~~L~W~~~~k~~--~~~l~I~~I~eVR~G~~t~~pk~~klr~~~~~~g~~~~~~e~r~fTIvyg~~~~n 116 (816)
T 3qr0_A 39 IEILLRVDPKGYFLYWKIEGKED--TQLLDLAYVRDIRCAKYAKPPKDKKIKEAGTNFGSSNIPLQDKCVTICHGYNYID 116 (816)
T ss_dssp EEEEEEECTTSCEEEECCTTCSS--CEEEEGGGEEEEEEGGGSCCCCSHHHHHHHHHSSCTTSCHHHHEEEEEECSSSSS
T ss_pred eeEEEEEcCCCCEEEEeCCCCCc--CcEEEeeeeeeeecCCcCCCCccHHHHHHHHhcCCCcccccccEEEEEECCCccc
Confidence 56888885 4566665433332 25677755433322211 00 236899998654
Q ss_pred -eeEEEEcCCHHHHHHHHHHHHHH
Q psy2207 279 -DPLVFGADNEQSYERWMKAMREA 301 (305)
Q Consensus 279 -~~~~f~a~s~e~~~~Wi~al~~a 301 (305)
..+.|.|+++++++.|+..|+.-
T Consensus 117 L~~l~LvA~s~e~A~~W~~gL~~L 140 (816)
T 3qr0_A 117 LEWTHLVAENSSVAKKWSEEVFSY 140 (816)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCHHHHHHHHHHHHHH
Confidence 23489999999999999999753
No 227
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=62.38 E-value=41 Score=33.46 Aligned_cols=77 Identities=6% Similarity=-0.017 Sum_probs=48.3
Q ss_pred CCCc--eEEEEEEE--CCEEEEEccCccCccceEEEecCeEEEEcc-cc-------------------CCcceeEEEEeC
Q psy2207 221 GRNW--KRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEALN-EQ-------------------DNFKYVFQLKHQ 276 (305)
Q Consensus 221 ~~~w--krrw~vL~--~~~L~~y~~~~d~~p~~~i~L~~~~v~~~~-~~-------------------~~~~~~F~l~~~ 276 (305)
.+.| +++.|.|. +..|+|..... ....|+|..+.-+..+ .. .....+|.|++.
T Consensus 28 ~~~~~~k~~~frLd~d~~~l~W~~~~k---~~~~l~I~~IkeIR~G~~s~~pk~~~~~e~~~~~~~~~~~e~~~fTIvyg 104 (799)
T 2zkm_X 28 DETTVASPVILRVDPKGYYLYWTYQSK---EMEFLDITSIRDTRFGKFAKMPKSQKLRDVFNMDFPDNSFLLKTLTVVSG 104 (799)
T ss_dssp TTTCCEEEEEEEECTTSCEEEEEETTS---CEEEEEGGGEEEEEEGGGSCCCCSHHHHHHTTCSSTTCCGGGTEEEEEEC
T ss_pred CCCcceeEEEEEEcCCCCEEEEccCCC---cCceEeeeeeHHhhcCCCCCCCchHHHHHHhcccCcccccccceEEEEEC
Confidence 4455 45667775 35666664322 2356777554433321 00 012368999986
Q ss_pred Cce----eEEEEcCCHHHHHHHHHHHHH
Q psy2207 277 GQD----PLVFGADNEQSYERWMKAMRE 300 (305)
Q Consensus 277 ~~~----~~~f~a~s~e~~~~Wi~al~~ 300 (305)
... .+.|.|+++++++.|+..|+.
T Consensus 105 ~~~~~l~~L~lvA~s~~ea~~Wv~GL~~ 132 (799)
T 2zkm_X 105 PDMVDLTFHNFVSYKENVGKAWAEDVLA 132 (799)
T ss_dssp SSSSSCEEEEEEESSSSHHHHHHHHHHH
T ss_pred CCccceeEEEEEeCCHHHHHHHHHHHHH
Confidence 543 579999999999999999974
No 228
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=62.06 E-value=5.4 Score=24.93 Aligned_cols=31 Identities=19% Similarity=0.528 Sum_probs=23.0
Q ss_pred CCcccccccccccccccccccccccceeccCccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
+.-.|..|...|..- .-..||..||..|...
T Consensus 5 ~~~~C~IC~~~~~~p----~~l~CgH~fC~~Ci~~ 35 (56)
T 1bor_A 5 QFLRCQQCQAEAKCP----KLLPCLHTLCSGCLEA 35 (56)
T ss_dssp CCSSCSSSCSSCBCC----SCSTTSCCSBTTTCSS
T ss_pred cCCCceEeCCccCCe----EEcCCCCcccHHHHcc
Confidence 345799999988632 2246999999999865
No 229
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.66 E-value=3 Score=28.59 Aligned_cols=51 Identities=27% Similarity=0.477 Sum_probs=32.9
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
...|.+|...|....+.-.-..||.+||..|......-. .....|..|-..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~----~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS----INGVRCPFCSKI 65 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC----SSCBCCTTTCCC
T ss_pred CCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC----CCCcCCCCCCCc
Confidence 457999999887643322233799999999987653221 124567777443
No 230
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=60.70 E-value=3.7 Score=25.52 Aligned_cols=27 Identities=30% Similarity=0.593 Sum_probs=17.9
Q ss_pred Cccccccccc-cc-cccccccccccccee
Q psy2207 84 VSMCQRCTSV-FT-VTFRRHHCRACGKVV 110 (305)
Q Consensus 84 ~~~C~~C~~~-f~-~~~rrhhCr~cg~v~ 110 (305)
...|..|+.. |- .-..|++|..||.+.
T Consensus 19 ~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 19 NKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp SEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred cccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 4578899873 22 224578888888753
No 231
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=60.11 E-value=4.6 Score=28.07 Aligned_cols=32 Identities=22% Similarity=0.594 Sum_probs=23.6
Q ss_pred cccccccccccc--cccccccccccceeccCccC
Q psy2207 85 SMCQRCTSVFTV--TFRRHHCRACGKVVCGPCSD 116 (305)
Q Consensus 85 ~~C~~C~~~f~~--~~rrhhCr~cg~v~C~~Cs~ 116 (305)
.-|.+|+..+.. ...+..|..||..||..|-.
T Consensus 26 ~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 26 LWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp ECCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred eECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 346678776632 23457899999999999985
No 232
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.71 E-value=2.2 Score=28.01 Aligned_cols=46 Identities=20% Similarity=0.387 Sum_probs=34.2
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHh
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQ 141 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~ 141 (305)
...|.+|...|.. .-..||.+||..|...... ....|..|-..+..
T Consensus 15 ~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~-------~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 15 EEECCICMDGRAD-----LILPCAHSFCQKCIDKWSD-------RHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSC-------CCSSCHHHHHCTTC
T ss_pred CCCCeeCCcCccC-----cccCCCCcccHHHHHHHHH-------CcCcCCCcCCcccC
Confidence 4579999998765 2356999999999875432 35679999777654
No 233
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=57.19 E-value=3.2 Score=29.59 Aligned_cols=46 Identities=22% Similarity=0.453 Sum_probs=32.0
Q ss_pred cccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
-.|.+|...|.. ...|..||.+||..|......-. ...|..|-..+
T Consensus 23 ~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~------~~~CP~Cr~~~ 68 (100)
T 3lrq_A 23 FRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQ------RAQCPHCRAPL 68 (100)
T ss_dssp TBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHT------CSBCTTTCCBC
T ss_pred CCCccCCccccC---ccccCCCCChhhHHHHHHHHHHC------cCCCCCCCCcC
Confidence 469999997752 34567899999999987653221 15677775544
No 234
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.10 E-value=8 Score=24.55 Aligned_cols=33 Identities=18% Similarity=0.552 Sum_probs=23.5
Q ss_pred CCcccccccccccccccccccccccceeccCccCCee
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLA 119 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~ 119 (305)
+...|.+|...|..-. . ..||.+||..|.....
T Consensus 19 ~~~~C~IC~~~~~~p~--~--~~CgH~fC~~Ci~~~~ 51 (63)
T 2ysj_A 19 EEVICPICLDILQKPV--T--IDCGHNFCLKCITQIG 51 (63)
T ss_dssp CCCBCTTTCSBCSSCE--E--CTTSSEECHHHHHHHH
T ss_pred cCCCCCcCCchhCCeE--E--eCCCCcchHHHHHHHH
Confidence 3457999998876321 1 2799999999986543
No 235
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=54.86 E-value=7.3 Score=25.44 Aligned_cols=26 Identities=27% Similarity=0.698 Sum_probs=18.7
Q ss_pred Ccccccccccccccc-cccccccccce
Q psy2207 84 VSMCQRCTSVFTVTF-RRHHCRACGKV 109 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~-rrhhCr~cg~v 109 (305)
.=.|..|+..|.+-. ..-.|+.||.-
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~R 47 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGHR 47 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCcE
Confidence 457999999998643 34677777753
No 236
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=54.55 E-value=6.9 Score=26.94 Aligned_cols=24 Identities=25% Similarity=0.618 Sum_probs=13.7
Q ss_pred ccccccccccccccccccccccce
Q psy2207 86 MCQRCTSVFTVTFRRHHCRACGKV 109 (305)
Q Consensus 86 ~C~~C~~~f~~~~rrhhCr~cg~v 109 (305)
.|..|.++.....+.+||..|+.-
T Consensus 4 ~CP~C~~~l~~~~~~~~C~~C~~~ 27 (81)
T 2jrp_A 4 TCPVCHHALERNGDTAHCETCAKD 27 (81)
T ss_dssp CCSSSCSCCEECSSEEECTTTCCE
T ss_pred CCCCCCCccccCCCceECcccccc
Confidence 466666655544445556666653
No 237
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.32 E-value=8.1 Score=25.25 Aligned_cols=46 Identities=20% Similarity=0.504 Sum_probs=29.6
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhH
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECY 136 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~ 136 (305)
+...|.+|...|..... -.||.+||..|...... .......|..|-
T Consensus 19 ~~~~C~IC~~~~~~~~~----~~CgH~fC~~Ci~~~~~----~~~~~~~CP~Cr 64 (73)
T 2ysl_A 19 EEVICPICLDILQKPVT----IDCGHNFCLKCITQIGE----TSCGFFKCPLCK 64 (73)
T ss_dssp CCCBCTTTCSBCSSEEE----CTTCCEEEHHHHHHHCS----SSCSCCCCSSSC
T ss_pred cCCEeccCCcccCCeEE----cCCCChhhHHHHHHHHH----cCCCCCCCCCCC
Confidence 35689999998763211 27999999999876542 112344566663
No 238
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=54.20 E-value=4.4 Score=29.87 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=22.0
Q ss_pred CCCcccccccc-ccc-ccccccccccccceeccCc
Q psy2207 82 SRVSMCQRCTS-VFT-VTFRRHHCRACGKVVCGPC 114 (305)
Q Consensus 82 ~~~~~C~~C~~-~f~-~~~rrhhCr~cg~v~C~~C 114 (305)
...-.|..|+. .+. ...-.|+|+.||.+|-+.-
T Consensus 58 ~akytCPfCGk~~vKR~avGIW~C~~Cgk~fAGGA 92 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQGTGIWQCSYCDYKFTGGS 92 (116)
T ss_dssp HSCEECSSSCCEEEEEEETTEEEETTTCCEEECCS
T ss_pred ccCCcCCCCCCceeEecCceeEECCCCCCEEECCC
Confidence 34557999987 222 2234689999999877543
No 239
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=54.02 E-value=6.1 Score=26.54 Aligned_cols=29 Identities=31% Similarity=0.505 Sum_probs=19.3
Q ss_pred Cccccccccccccc---ccccccccccceeccC
Q psy2207 84 VSMCQRCTSVFTVT---FRRHHCRACGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~ 113 (305)
.-.|..|+.. .+. .-.+||+.||..|-+.
T Consensus 26 ky~C~fCgk~-~vkR~a~GIW~C~~C~~~~AGG 57 (72)
T 3jyw_9 26 RYDCSFCGKK-TVKRGAAGIWTCSCCKKTVAGG 57 (72)
T ss_dssp CBCCSSCCSS-CBSBCSSSCBCCSSSCCCCCCS
T ss_pred CccCCCCCCc-eeEecCCCeEECCCCCCEEeCC
Confidence 3469999864 222 2358999998887543
No 240
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=52.18 E-value=67 Score=32.33 Aligned_cols=33 Identities=12% Similarity=0.190 Sum_probs=27.5
Q ss_pred ceeEEEEeCCce----eEEEEcCCHHHHHHHHHHHHH
Q psy2207 268 KYVFQLKHQGQD----PLVFGADNEQSYERWMKAMRE 300 (305)
Q Consensus 268 ~~~F~l~~~~~~----~~~f~a~s~e~~~~Wi~al~~ 300 (305)
..+|.|++.... .+.|.|+++++++.|+..|+.
T Consensus 100 ~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~ 136 (885)
T 3ohm_B 100 EKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFK 136 (885)
T ss_dssp TTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHH
T ss_pred ccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHH
Confidence 368999987542 589999999999999999875
No 241
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=52.15 E-value=5.1 Score=29.16 Aligned_cols=47 Identities=17% Similarity=0.495 Sum_probs=31.9
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
.-.|.+|...|..-. . ..||..||..|...... .....|..|-..+.
T Consensus 15 ~~~C~iC~~~~~~p~--~--~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICMEILVEPV--T--LPCNHTLCKPCFQSTVE------KASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCSBCSSCE--E--CTTSCEECHHHHCCCCC------TTTSBCTTTCCBCH
T ss_pred CCCCccCCcccCcee--E--cCCCCHHhHHHHHHHHh------HCcCCCCCCCcccC
Confidence 457999998775321 1 27999999999976542 22367888866554
No 242
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=51.94 E-value=6.2 Score=27.86 Aligned_cols=30 Identities=30% Similarity=0.668 Sum_probs=20.6
Q ss_pred Cccccccccccccc---ccccccccccceeccCc
Q psy2207 84 VSMCQRCTSVFTVT---FRRHHCRACGKVVCGPC 114 (305)
Q Consensus 84 ~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~C 114 (305)
--.|..|+.. .+. ...+||+.||..|-+.-
T Consensus 36 ky~CpfCgk~-~vkR~a~GIW~C~~Cg~~~AGGA 68 (92)
T 3iz5_m 36 KYFCEFCGKF-AVKRKAVGIWGCKDCGKVKAGGA 68 (92)
T ss_dssp CBCCTTTCSS-CBEEEETTEEECSSSCCEEECCS
T ss_pred cccCcccCCC-eeEecCcceEEcCCCCCEEeCCc
Confidence 3479999875 322 23689999999886543
No 243
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=51.88 E-value=3.9 Score=26.70 Aligned_cols=37 Identities=22% Similarity=0.430 Sum_probs=26.4
Q ss_pred CCccccccccccccc---ccccccccccceeccCccCCee
Q psy2207 83 RVSMCQRCTSVFTVT---FRRHHCRACGKVVCGPCSDYLA 119 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~Cs~~~~ 119 (305)
+...|.+|...|... .+......||.+||..|.....
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~ 48 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL 48 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHH
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHH
Confidence 356899999988643 1223556899999999987543
No 244
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.87 E-value=5.5 Score=27.57 Aligned_cols=29 Identities=24% Similarity=0.576 Sum_probs=20.0
Q ss_pred Cccccccccccccc---ccccccccccceeccC
Q psy2207 84 VSMCQRCTSVFTVT---FRRHHCRACGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~ 113 (305)
--.|..|+.. .+. .-.+||+.||..|-+.
T Consensus 35 ky~CpfCGk~-~vkR~a~GIW~C~kCg~~~AGG 66 (83)
T 3j21_i 35 KHTCPVCGRK-AVKRISTGIWQCQKCGATFAGG 66 (83)
T ss_dssp CBCCSSSCSS-CEEEEETTEEEETTTCCEEECC
T ss_pred ccCCCCCCCc-eeEecCcCeEEcCCCCCEEeCC
Confidence 3469999875 322 2358999999887654
No 245
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.50 E-value=5.1 Score=26.32 Aligned_cols=44 Identities=23% Similarity=0.432 Sum_probs=28.6
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHH
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
+...|.+|...|..... ..||.+||..|....... ...|..|-.
T Consensus 14 ~~~~C~IC~~~~~~~~~----~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~ 57 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVS----LPCKHVFCYLCVKGASWL-------GKRCALCRQ 57 (71)
T ss_dssp SCCBCSSSSSBCSSEEE----ETTTEEEEHHHHHHCTTC-------SSBCSSSCC
T ss_pred CCCCCccCCcccCCCEE----ccCCCHHHHHHHHHHHHC-------CCcCcCcCc
Confidence 35579999987753211 269999999998654321 246766633
No 246
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=51.21 E-value=2.4 Score=31.50 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=30.8
Q ss_pred cccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
-.|.+|...|..-.. ..||..||..|...... .....|..|-..+.
T Consensus 53 ~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~------~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVFRPIT----TVCQHNVCKDCLDRSFR------AQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCSSEEE----CTTSCEEEHHHHHHHHH------TTCCBCTTTCCBCC
T ss_pred CCCCcCChHHcCcEE----eeCCCcccHHHHHHHHh------HCcCCCCCCCccCC
Confidence 479999998763211 27999999999876543 22347877755443
No 247
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=50.05 E-value=6 Score=27.41 Aligned_cols=30 Identities=17% Similarity=0.307 Sum_probs=20.7
Q ss_pred ccccccccc--ccccccccccccccceeccCc
Q psy2207 85 SMCQRCTSV--FTVTFRRHHCRACGKVVCGPC 114 (305)
Q Consensus 85 ~~C~~C~~~--f~~~~rrhhCr~cg~v~C~~C 114 (305)
-.|..|+.. |....-.++|..||..+-+.-
T Consensus 28 y~Cp~CG~~~v~r~atGiW~C~~Cg~~~agga 59 (83)
T 1vq8_Z 28 HACPNCGEDRVDRQGTGIWQCSYCDYKFTGGS 59 (83)
T ss_dssp EECSSSCCEEEEEEETTEEEETTTCCEEECCS
T ss_pred CcCCCCCCcceeccCCCeEECCCCCCEecCCE
Confidence 469999873 223445788999998877543
No 248
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.21 E-value=6.2 Score=26.17 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=26.0
Q ss_pred CCCcccccccccccccccccccccccceeccCccCCee
Q psy2207 82 SRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLA 119 (305)
Q Consensus 82 ~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~ 119 (305)
.+...|.+|...|..-. ......||.+||..|.....
T Consensus 21 ~~~~~C~IC~~~~~~~~-~~~~l~C~H~fh~~Ci~~w~ 57 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQ-LLRVLPCNHEFHAKCVDKWL 57 (75)
T ss_dssp SSCCEETTTTEECCBTC-EEEEETTTEEEETTHHHHHH
T ss_pred CCCCCCeECCcccCCCC-eEEEECCCCHhHHHHHHHHH
Confidence 34568999999886432 22334599999999987653
No 249
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.72 E-value=4.6 Score=26.06 Aligned_cols=37 Identities=24% Similarity=0.460 Sum_probs=26.1
Q ss_pred CCCccccccccccccc---ccccccccccceeccCccCCe
Q psy2207 82 SRVSMCQRCTSVFTVT---FRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 82 ~~~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
.+...|.+|...|... .+...-..||.+||..|....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~ 52 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDS 52 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHH
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHH
Confidence 3456899999988643 222245689999999998654
No 250
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=47.95 E-value=12 Score=24.80 Aligned_cols=49 Identities=14% Similarity=0.293 Sum_probs=31.3
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
....|.+|...|...... .-..||.+||..|...... ....|..|-..+
T Consensus 14 ~~~~C~IC~~~~~~~~~~-~~~~C~H~fc~~Ci~~~~~-------~~~~CP~Cr~~~ 62 (78)
T 2ect_A 14 SGLECPVCKEDYALGESV-RQLPCNHLFHDSCIVPWLE-------QHDSCPVCRKSL 62 (78)
T ss_dssp SSCCCTTTTSCCCTTSCE-EECTTSCEEETTTTHHHHT-------TTCSCTTTCCCC
T ss_pred CCCCCeeCCccccCCCCE-EEeCCCCeecHHHHHHHHH-------cCCcCcCcCCcc
Confidence 355899999988633211 1125999999999976532 124687774444
No 251
>2rrf_A Zinc finger FYVE domain-containing protein 21; zfyve21, PH, unknown function; NMR {Homo sapiens}
Probab=47.39 E-value=16 Score=27.63 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=26.1
Q ss_pred CcceeEEEEeCCce------eEEEEcCC----HHHHHHHHHHHHHHHcC
Q psy2207 266 NFKYVFQLKHQGQD------PLVFGADN----EQSYERWMKAMREATTL 304 (305)
Q Consensus 266 ~~~~~F~l~~~~~~------~~~f~a~s----~e~~~~Wi~al~~a~~~ 304 (305)
.+..+|.|...... .-+..+++ ....-.|+.|+++|+++
T Consensus 80 ~rasGm~l~Yk~~g~~~~~ql~lt~~~d~~~~kk~s~aWlaAm~KA~Kl 128 (141)
T 2rrf_A 80 ARATGMFLQYTVPGTEGVTQLKLTVVEDVTVGRRQAVAWLVAMHKAAKL 128 (141)
T ss_dssp CCCSCCEEEECCTTSSSCEEEEEECCCSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ceeeEEEEEeeCCCccceeEEEEeeccccCcchhhhHHHHHHHHHHHHH
Confidence 35567777764322 23444555 67888999999999864
No 252
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.14 E-value=8.2 Score=26.20 Aligned_cols=54 Identities=15% Similarity=0.290 Sum_probs=35.0
Q ss_pred CCeeeecCCCccccccccccccc----------cc-ccccccccceeccCccCCeecccCCCCccccccHhh
Q psy2207 75 APLWIPDSRVSMCQRCTSVFTVT----------FR-RHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEEC 135 (305)
Q Consensus 75 ~p~w~~d~~~~~C~~C~~~f~~~----------~r-rhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C 135 (305)
-+.|--|.+...|.+|...|... .. ...-..||.+||..|....... ...|..|
T Consensus 6 ~~~w~~~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~-------~~~CP~C 70 (81)
T 2ecl_A 6 SGMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQ-------NNRCPLC 70 (81)
T ss_dssp CCCCCCSCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTT-------CCBCTTT
T ss_pred eEEeeecCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHh-------CCCCCCc
Confidence 45676677778899999998541 11 1122359999999998764321 2367666
No 253
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=46.86 E-value=6.5 Score=30.83 Aligned_cols=24 Identities=25% Similarity=0.603 Sum_probs=15.4
Q ss_pred cccccccccccccccccccccccc
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGK 108 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~ 108 (305)
-.|..|+..|........|..||.
T Consensus 133 y~C~~Cg~~~~~~~~~~~Cp~CG~ 156 (165)
T 2lcq_A 133 YVCIGCGRKFSTLPPGGVCPDCGS 156 (165)
T ss_dssp EEESSSCCEESSCCGGGBCTTTCC
T ss_pred EECCCCCCcccCCCCCCcCCCCCC
Confidence 368888888875544445666664
No 254
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=46.32 E-value=7.9 Score=28.29 Aligned_cols=44 Identities=23% Similarity=0.585 Sum_probs=29.7
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
.-.|.+|...|..- ..-..||..||..|...... ..|..|-..+
T Consensus 22 ~~~C~IC~~~~~~p---v~~~~CgH~fC~~Ci~~~~~---------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILREP---VCLGGCEHIFCSNCVSDCIG---------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCSSC---BCCCSSSCCBCTTTGGGGTT---------TBCSSSCCBC
T ss_pred CCCCCCCChHhhCc---cEeCCCCCHHHHHHHHHHhc---------CCCcCCCCcC
Confidence 34799998877421 11126999999999976542 5677775554
No 255
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.29 E-value=9.4 Score=25.09 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=29.9
Q ss_pred CCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHH
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
....|.+|...|........ -.||.+||..|....... ...|..|-.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~-~~C~H~f~~~Ci~~~~~~-------~~~CP~Cr~ 60 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGI-CPCKHAFHRKCLIKWLEV-------RKVCPLCNM 60 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEE-ETTTEEEEHHHHHHHHHH-------CSBCTTTCC
T ss_pred CCCCCcCCCcccCCCCcEEE-cCCCCEecHHHHHHHHHc-------CCcCCCcCc
Confidence 34579999998864322211 259999999998764321 236777743
No 256
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=46.25 E-value=7.6 Score=25.11 Aligned_cols=33 Identities=24% Similarity=0.480 Sum_probs=26.4
Q ss_pred CcccccccccccccccccccccccceeccCccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSD 116 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~ 116 (305)
...|..|+..-.+.+.-..|+.|+.++-..|-.
T Consensus 19 ~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 19 PESCVPCGKRIKFGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp CEECTTTCCEECTTCEEEEESSSSCEECGGGGG
T ss_pred CcccccccCEEEEeeEeeECCCCCCeEchhHhh
Confidence 468999987655556678999999999988854
No 257
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=45.79 E-value=88 Score=24.62 Aligned_cols=73 Identities=11% Similarity=0.106 Sum_probs=43.4
Q ss_pred eEEEEEEE-----CCEEEEEccCccCc----cceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEcCCHHHHHHHH
Q psy2207 225 KRYWFVLK-----DQVMYKYKASEDIK----ALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWM 295 (305)
Q Consensus 225 krrw~vL~-----~~~L~~y~~~~d~~----p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi 295 (305)
|.|+.+|. .+.+.+++...... -..+.+|........... ....|.|.. + +.|++.|++..|...++
T Consensus 65 K~R~L~lav~~~~sgrV~lhK~K~N~ngsfsiGkTW~L~ELk~Ie~~~~--~~~gF~ltl-~-K~Y~W~a~s~~Er~~FI 140 (171)
T 3hie_A 65 KKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKDLE--ISEGFILTM-S-KKYYWETNSAKERTVFI 140 (171)
T ss_dssp EEEEEEEEECTTCTTCEEEEEEEECTTSCEEEEEEEEGGGCCEEEECSS--CTTEEEEES-S-SEEEEECSSHHHHHHHH
T ss_pred cceEEEEEEecCCCceEEEEEEEECCCCcEEeeeeeecccceeeeccCC--CCCcEEEEe-C-CeEEEecCCHHHHHHHH
Confidence 45555552 34456666543221 123455554444322111 235788875 3 57999999999999999
Q ss_pred HHHHHH
Q psy2207 296 KAMREA 301 (305)
Q Consensus 296 ~al~~a 301 (305)
..|-+.
T Consensus 141 ~sL~K~ 146 (171)
T 3hie_A 141 KSLITL 146 (171)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999654
No 258
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=44.98 E-value=8.5 Score=24.51 Aligned_cols=11 Identities=18% Similarity=0.700 Sum_probs=8.8
Q ss_pred ccccccccccc
Q psy2207 86 MCQRCTSVFTV 96 (305)
Q Consensus 86 ~C~~C~~~f~~ 96 (305)
.|..|+..|..
T Consensus 6 ~C~~C~k~F~~ 16 (60)
T 4gzn_C 6 FCNFCGKTYRD 16 (60)
T ss_dssp ECTTTCCEESS
T ss_pred cCCCCCCEeCC
Confidence 58889998863
No 259
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=44.35 E-value=8.5 Score=25.94 Aligned_cols=30 Identities=20% Similarity=0.432 Sum_probs=19.6
Q ss_pred Cccccccccc-cc-ccccccccccccceeccC
Q psy2207 84 VSMCQRCTSV-FT-VTFRRHHCRACGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~-f~-~~~rrhhCr~cg~v~C~~ 113 (305)
...|..|+.. +. ...-.++|+.||..|-+.
T Consensus 27 ky~C~fCgk~~vkR~a~GIW~C~~C~~~~AGG 58 (73)
T 1ffk_W 27 KYKCPVCGFPKLKRASTSIWVCGHCGYKIAGG 58 (73)
T ss_pred CccCCCCCCceeEEEEeEEEECCCCCcEEECC
Confidence 4478999862 21 223458899999887654
No 260
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=44.31 E-value=6.1 Score=30.85 Aligned_cols=47 Identities=19% Similarity=0.417 Sum_probs=32.2
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
...|.+|...|.. ...+..||.+||..|......- ....|..|-..+
T Consensus 54 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~------~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 54 ELMCPICLDMLKN---TMTTKECLHRFCADCIITALRS------GNKECPTCRKKL 100 (165)
T ss_dssp HHBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHHT------TCCBCTTTCCBC
T ss_pred CCCCcccChHhhC---cCEeCCCCChhHHHHHHHHHHh------CcCCCCCCCCcC
Confidence 3479999887763 2233589999999998765431 135688885554
No 261
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=43.96 E-value=8.3 Score=28.51 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=8.8
Q ss_pred cccccccccccccc
Q psy2207 86 MCQRCTSVFTVTFR 99 (305)
Q Consensus 86 ~C~~C~~~f~~~~r 99 (305)
.|..|+..|.+...
T Consensus 75 ~C~~CG~~~e~~~~ 88 (119)
T 2kdx_A 75 ECKDCSHVFKPNAL 88 (119)
T ss_dssp ECSSSSCEECSCCS
T ss_pred EcCCCCCEEeCCCC
Confidence 47777777765433
No 262
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=43.45 E-value=7.5 Score=27.97 Aligned_cols=31 Identities=26% Similarity=0.565 Sum_probs=20.8
Q ss_pred Cccccccccccccc---ccccccccccceeccCcc
Q psy2207 84 VSMCQRCTSVFTVT---FRRHHCRACGKVVCGPCS 115 (305)
Q Consensus 84 ~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~Cs 115 (305)
--.|..|+.. .+. ...+||+.||..|-+.--
T Consensus 36 ky~CpfCgk~-~vKR~a~GIW~C~kCg~~~AGGAy 69 (103)
T 4a17_Y 36 KYGCPFCGKV-AVKRAAVGIWKCKPCKKIIAGGAW 69 (103)
T ss_dssp CEECTTTCCE-EEEEEETTEEEETTTTEEEECCSS
T ss_pred CCCCCCCCCc-eeeecCcceEEcCCCCCEEeCCcc
Confidence 3469999874 222 236899999998876443
No 263
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=42.96 E-value=11 Score=26.78 Aligned_cols=26 Identities=27% Similarity=0.714 Sum_probs=19.1
Q ss_pred Ccccccccccccccccccccccccce
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKV 109 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v 109 (305)
...|..|.++.......+||..|+.-
T Consensus 32 ~~~CP~Cq~eL~~~g~~~hC~~C~~~ 57 (101)
T 2jne_A 32 ELHCPQCQHVLDQDNGHARCRSCGEF 57 (101)
T ss_dssp CCBCSSSCSBEEEETTEEEETTTCCE
T ss_pred cccCccCCCcceecCCEEECccccch
Confidence 35899999987755566678777764
No 264
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=42.70 E-value=6.4 Score=24.88 Aligned_cols=35 Identities=23% Similarity=0.490 Sum_probs=24.8
Q ss_pred Cccccccccccccc---ccccccccccceeccCccCCe
Q psy2207 84 VSMCQRCTSVFTVT---FRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 84 ~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
...|.+|...|... .+......||.+||..|....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~ 40 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDS 40 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHH
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHH
Confidence 45799999988642 122345689999999998654
No 265
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=42.64 E-value=14 Score=24.67 Aligned_cols=49 Identities=14% Similarity=0.339 Sum_probs=30.3
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
...|.+|...|..-. -..||.+||..|......-.. .......|..|-.
T Consensus 19 ~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~~~~-~~~~~~~CP~Cr~ 67 (85)
T 2ecw_A 19 EVTCPICLELLKEPV----SADCNHSFCRACITLNYESNR-NTDGKGNCPVCRV 67 (85)
T ss_dssp TTSCTTTCSCCSSCE----ECTTSCCBCHHHHHHHHHHSB-CTTSCBCCTTTCC
T ss_pred CCCCcCCChhhCcce----eCCCCCHHHHHHHHHHHHhcc-CCCCCCCCCCCCC
Confidence 458999999875322 135999999999865432211 1123456776643
No 266
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=42.40 E-value=11 Score=24.92 Aligned_cols=45 Identities=20% Similarity=0.479 Sum_probs=28.5
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECY 136 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~ 136 (305)
.-.|.+|...|..- ..-..||.+||..|......- .....|..|-
T Consensus 15 ~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~-----~~~~~CP~Cr 59 (74)
T 2yur_A 15 ELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLE-----SDEHTCPTCH 59 (74)
T ss_dssp GGSCSSSCCCCTTC---EECSSSCCEECTTHHHHHHHH-----SSSSCCSSSC
T ss_pred CCCCcCCChHHhCC---eEcCCCCCHHHHHHHHHHHHh-----cCCCcCCCCC
Confidence 45799998877632 223349999999998655321 1134566663
No 267
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.10 E-value=8.2 Score=26.04 Aligned_cols=49 Identities=24% Similarity=0.600 Sum_probs=33.8
Q ss_pred CCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 82 SRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 82 ~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
+.+..|++|...|.. .--|..|+..|-..|..... .....++|..|-..
T Consensus 13 ~~i~~C~IC~~~i~~---g~~C~~C~h~fH~~Ci~kWl-----~~~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 13 DAVKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYF-----QSNAEPRCPHCNDY 61 (74)
T ss_dssp SSSCBCSSSCCBCSS---SEECSSSCCEECHHHHHHHS-----TTCSSCCCTTTCSC
T ss_pred CCCCcCcchhhHccc---CCccCCCCchhhHHHHHHHH-----HhcCCCCCCCCcCc
Confidence 346789999998863 34577888888888886553 23334788888533
No 268
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=42.05 E-value=30 Score=28.62 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=32.6
Q ss_pred cCCCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHH
Q psy2207 9 EDYNNEFSVIAISRSFTLRARSANERLEWIDAIQTAI 45 (305)
Q Consensus 9 ~~~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai 45 (305)
++..|++.|+..+-+..|.++|.++..+|...|+...
T Consensus 76 dk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 76 EGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp TTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred cCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 4567899999999999999999999999999887644
No 269
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=42.03 E-value=13 Score=23.89 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=28.5
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECY 136 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~ 136 (305)
...|..|...|... .....||.+||..|...... ....|..|-
T Consensus 5 ~~~C~IC~~~~~~~---~~~~~C~H~fc~~Ci~~~~~-------~~~~CP~Cr 47 (68)
T 1chc_A 5 AERCPICLEDPSNY---SMALPCLHAFCYVCITRWIR-------QNPTCPLCK 47 (68)
T ss_dssp CCCCSSCCSCCCSC---EEETTTTEEESTTHHHHHHH-------HSCSTTTTC
T ss_pred CCCCeeCCccccCC---cEecCCCCeeHHHHHHHHHh-------CcCcCcCCC
Confidence 45799999887531 13456999999999865431 124676663
No 270
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=41.93 E-value=8.2 Score=27.70 Aligned_cols=47 Identities=17% Similarity=0.438 Sum_probs=30.2
Q ss_pred ccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 86 MCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 86 ~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
.|..|...|..-.. -.||.+||..|......-. .....|..|-..+.
T Consensus 23 ~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~----~~~~~CP~Cr~~~~ 69 (112)
T 1jm7_A 23 ECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQK----KGPSQCPLCKNDIT 69 (112)
T ss_dssp SCSSSCCCCSSCCB----CTTSCCCCSHHHHHHHHSS----SSSCCCTTTSCCCC
T ss_pred CCcccChhhcCeEE----CCCCCHHHHHHHHHHHHhC----CCCCCCcCCCCcCC
Confidence 69999887753211 3699999999986654221 12356877755443
No 271
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=41.56 E-value=10 Score=24.44 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=24.2
Q ss_pred CCcccccccccccccccccccccccceeccCccCCee
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLA 119 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~ 119 (305)
....|.+|...|.... ......||.+||..|.....
T Consensus 13 ~~~~C~IC~~~~~~~~-~~~~~~C~H~fc~~Ci~~~~ 48 (69)
T 2kiz_A 13 TEEKCTICLSILEEGE-DVRRLPCMHLFHQVCVDQWL 48 (69)
T ss_dssp CCCSBTTTTBCCCSSS-CEEECTTSCEEEHHHHHHHH
T ss_pred CCCCCeeCCccccCCC-cEEEeCCCCHHHHHHHHHHH
Confidence 3557999988774221 12234599999999986543
No 272
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.02 E-value=10 Score=25.50 Aligned_cols=44 Identities=18% Similarity=0.347 Sum_probs=29.2
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
.-.|.+|...|..-. -..||.+||..|...... ....|..|-..
T Consensus 15 ~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~~~-------~~~~CP~Cr~~ 58 (81)
T 2csy_A 15 PFRCFICRQAFQNPV----VTKCRHYFCESCALEHFR-------ATPRCYICDQP 58 (81)
T ss_dssp CSBCSSSCSBCCSEE----ECTTSCEEEHHHHHHHHH-------HCSBCSSSCCB
T ss_pred CCCCcCCCchhcCee----EccCCCHhHHHHHHHHHH-------CCCcCCCcCcc
Confidence 457999999885321 247999999999866532 13456666443
No 273
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=40.86 E-value=21 Score=22.89 Aligned_cols=35 Identities=20% Similarity=0.513 Sum_probs=25.4
Q ss_pred Cccccccccccccc--cccccccc--ccceeccCccCCe
Q psy2207 84 VSMCQRCTSVFTVT--FRRHHCRA--CGKVVCGPCSDYL 118 (305)
Q Consensus 84 ~~~C~~C~~~f~~~--~rrhhCr~--cg~v~C~~Cs~~~ 118 (305)
...|..|+.+.... -..-.|++ ||..||..|....
T Consensus 6 ~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~ 44 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPW 44 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCS
T ss_pred ceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCc
Confidence 56788888866432 22457888 9999999998653
No 274
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.85 E-value=9.6 Score=23.51 Aligned_cols=31 Identities=19% Similarity=0.519 Sum_probs=22.6
Q ss_pred CcccccccccccccccccccccccceeccCccCCe
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
...|.+|...|..-. --.||.+||..|....
T Consensus 15 ~~~C~IC~~~~~~p~----~~~CgH~fC~~Ci~~~ 45 (58)
T 2ecj_A 15 EASCSVCLEYLKEPV----IIECGHNFCKACITRW 45 (58)
T ss_dssp CCBCSSSCCBCSSCC----CCSSCCCCCHHHHHHH
T ss_pred CCCCccCCcccCccE----eCCCCCccCHHHHHHH
Confidence 457999999876321 1369999999998654
No 275
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=40.67 E-value=14 Score=27.16 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=16.9
Q ss_pred eeccCccCCeecccCCCCccccccHhhHHHHHhc
Q psy2207 109 VVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQE 142 (305)
Q Consensus 109 v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~~ 142 (305)
.+|..|....-++=-.+..-.-+|..|.......
T Consensus 60 ~~C~~C~t~~tp~WRr~~~g~~lCNaCgl~~~~~ 93 (115)
T 4hc9_A 60 TSCANCQTTTTTLWRRNANGDPVCNACGLYYKLH 93 (115)
T ss_dssp CCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHH
T ss_pred ccCCCcCCCCcceeEECCCCCCcchHHHHHHHHh
Confidence 3566666554333101111146788887666543
No 276
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=40.64 E-value=13 Score=24.48 Aligned_cols=27 Identities=26% Similarity=0.672 Sum_probs=18.9
Q ss_pred ccccccc---cccccccccccccccceecc
Q psy2207 86 MCQRCTS---VFTVTFRRHHCRACGKVVCG 112 (305)
Q Consensus 86 ~C~~C~~---~f~~~~rrhhCr~cg~v~C~ 112 (305)
.|.+|.. -|+-......|..||.+.|.
T Consensus 9 KCp~C~niq~VFShA~tvV~C~~Cg~~L~~ 38 (66)
T 1qxf_A 9 KCPDCEHEQVIFDHPSTIVKCIICGRTVAE 38 (66)
T ss_dssp ECTTTCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCceEEEecCceEEEcccCCCEEee
Confidence 5888876 45445566778888888774
No 277
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=40.58 E-value=11 Score=25.56 Aligned_cols=48 Identities=17% Similarity=0.418 Sum_probs=29.3
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
...|.+|-.+|++....-.--.||..||..|...... .....|..|-.
T Consensus 11 ~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~------~~~~~CP~CR~ 58 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRT------DENGLCPACRK 58 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTT------SSCSBCTTTCC
T ss_pred CCcCCccCccCccccccccccCCCCCcCHHHHHHHHh------cCCCCCCCCCC
Confidence 4579999998865333222126999999999754321 12355777733
No 278
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.50 E-value=13 Score=24.34 Aligned_cols=46 Identities=15% Similarity=0.363 Sum_probs=30.2
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
...|.+|...|..- ..-..||.+||..|....... ...|..|-..+
T Consensus 15 ~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~~~ 60 (72)
T 2djb_A 15 YILCSICKGYLIDA---TTITECLHTFCKSCIVRHFYY-------SNRCPKCNIVV 60 (72)
T ss_dssp GGSCTTTSSCCSSC---EECSSSCCEECHHHHHHHHHH-------CSSCTTTCCCC
T ss_pred CCCCCCCChHHHCc---CEECCCCCHHHHHHHHHHHHc-------CCcCCCcCccc
Confidence 45799998877531 223479999999998665421 35677774433
No 279
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=39.77 E-value=6.9 Score=25.08 Aligned_cols=34 Identities=26% Similarity=0.712 Sum_probs=22.5
Q ss_pred cccccccc-cccccccccccccccceeccCccCCe
Q psy2207 85 SMCQRCTS-VFTVTFRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 85 ~~C~~C~~-~f~~~~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
..|.+|.. .|.--..+..-..||.+||..|....
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~ 38 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLL 38 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHH
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHH
Confidence 46899988 66432222122479999999998654
No 280
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.61 E-value=6.8 Score=25.20 Aligned_cols=32 Identities=25% Similarity=0.628 Sum_probs=23.3
Q ss_pred CcccccccccccccccccccccccceeccCccCCee
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLA 119 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~ 119 (305)
...|..|...|..... ..||.++|..|.....
T Consensus 15 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~ 46 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQ----TECGHRFCESCMAALL 46 (66)
T ss_dssp CEECTTTCCEESSCCC----CSSSCCCCHHHHHHHH
T ss_pred CCCCCCCChHhcCeeE----CCCCCHHHHHHHHHHH
Confidence 4579999987753211 4799999999987654
No 281
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=39.33 E-value=15 Score=22.38 Aligned_cols=8 Identities=38% Similarity=1.082 Sum_probs=5.5
Q ss_pred cccccccc
Q psy2207 85 SMCQRCTS 92 (305)
Q Consensus 85 ~~C~~C~~ 92 (305)
-.|..|+.
T Consensus 6 ~~CP~C~~ 13 (50)
T 1pft_A 6 KVCPACES 13 (50)
T ss_dssp CSCTTTSC
T ss_pred EeCcCCCC
Confidence 35778866
No 282
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=38.59 E-value=7.8 Score=26.92 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=24.6
Q ss_pred CCcccccccccccccccccccccccceeccCccCCee
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLA 119 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~ 119 (305)
....|.+|...|..... ...-.||.+||..|.....
T Consensus 39 ~~~~C~IC~~~~~~~~~-~~~l~C~H~Fh~~Ci~~wl 74 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDV-ATELPCHHYFHKPCVSIWL 74 (91)
T ss_dssp SCSEETTTTEECCTTCE-EEEETTTEEEEHHHHHHHH
T ss_pred CCCCCcccChhhcCCCc-EEecCCCChHHHHHHHHHH
Confidence 35579999988864222 1223499999999986643
No 283
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=38.12 E-value=15 Score=23.93 Aligned_cols=27 Identities=26% Similarity=0.682 Sum_probs=19.0
Q ss_pred ccccccc---cccccccccccccccceecc
Q psy2207 86 MCQRCTS---VFTVTFRRHHCRACGKVVCG 112 (305)
Q Consensus 86 ~C~~C~~---~f~~~~rrhhCr~cg~v~C~ 112 (305)
.|.+|.. -|+-......|..||.++|.
T Consensus 17 kCp~C~~~q~VFSha~t~V~C~~Cgt~L~~ 46 (63)
T 3j20_W 17 KCIDCGNEQIVFSHPATKVRCLICGATLVE 46 (63)
T ss_dssp ECSSSCCEEEEESSCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeEEEecCCeEEEccCcCCEEec
Confidence 5888877 45445556778888888774
No 284
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=37.89 E-value=14 Score=26.90 Aligned_cols=31 Identities=23% Similarity=0.546 Sum_probs=23.0
Q ss_pred CcccccccccccccccccccccccceeccCccCCe
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
...|..|...=+ .+.|..||.|.|++=-..+
T Consensus 24 ~~~C~~C~~~~~----~W~CL~CG~vgCgr~~~~H 54 (109)
T 3c5k_A 24 TQPCGDCGTIQE----NWVCLSCYQVYCGRYINGH 54 (109)
T ss_dssp TCCCTTTCCCSS----EEEETTTCCEEECTTTTCH
T ss_pred CCcCccccCCCC----eeeeeecCccccCCCcChH
Confidence 457999998543 4669999999998654444
No 285
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=37.87 E-value=9.8 Score=26.73 Aligned_cols=46 Identities=17% Similarity=0.451 Sum_probs=30.6
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
.-.|.+|...|..- .....||..||..|....... ...|..|-..+
T Consensus 22 ~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~~~ 67 (99)
T 2y43_A 22 LLRCGICFEYFNIA---MIIPQCSHNYCSLCIRKFLSY-------KTQCPTCCVTV 67 (99)
T ss_dssp HTBCTTTCSBCSSE---EECTTTCCEEEHHHHHHHHTT-------CCBCTTTCCBC
T ss_pred CCCcccCChhhCCc---CEECCCCCHhhHHHHHHHHHC-------CCCCCCCCCcC
Confidence 34799999887631 222479999999998665421 24677775444
No 286
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=36.51 E-value=13 Score=24.01 Aligned_cols=20 Identities=30% Similarity=0.830 Sum_probs=12.5
Q ss_pred Cccccccccccccccccc-cccccc
Q psy2207 84 VSMCQRCTSVFTVTFRRH-HCRACG 107 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrh-hCr~cg 107 (305)
...|..|+. ..+.| -|..||
T Consensus 30 l~~c~~cGe----~~~~H~vc~~CG 50 (60)
T 3v2d_5 30 LVPCPECKA----MKPPHTVCPECG 50 (60)
T ss_dssp CEECTTTCC----EECTTSCCTTTC
T ss_pred eeECCCCCC----eecceEEcCCCC
Confidence 346888888 44444 466665
No 287
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=36.29 E-value=1.3e+02 Score=25.94 Aligned_cols=74 Identities=11% Similarity=0.079 Sum_probs=44.6
Q ss_pred ceEEEEEEE-----CCEEEEEccCccCc----cceEEEecCeEEEEccccCCcceeEEEEeCCceeEEEEcCCHHHHHHH
Q psy2207 224 WKRYWFVLK-----DQVMYKYKASEDIK----ALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERW 294 (305)
Q Consensus 224 wkrrw~vL~-----~~~L~~y~~~~d~~----p~~~i~L~~~~v~~~~~~~~~~~~F~l~~~~~~~~~f~a~s~e~~~~W 294 (305)
-|.|+.+|. .+.+.+++..+... -..+.+|.....+... ......|.|.. ++.|++.|++..|...+
T Consensus 134 KK~R~LcLaV~~d~sGRV~LhKaKeN~ngsFsIGKTW~L~ELk~Id~~--~~~~~gF~LTl--~K~YyW~A~s~kER~~F 209 (320)
T 3a58_A 134 KKKRLLILSAKPNNAKLIQIHKARENSDGSFQIGRTWQLTELVRVEKD--LEISEGFILTM--SKKYYWETNSAKERTVF 209 (320)
T ss_dssp EEEEEEEEEECSSCTTCEEEEEEEECGGGCEEEEEEEEGGGCCEEEEC--SSCTTEEEEES--SSEEEEEESSHHHHHHH
T ss_pred cCceEEEEEEecCCCceEEEEEEEecCCCceEecceechhhhhhhhcc--cCCCCceEEEe--CCceEEecCCHHHHHHH
Confidence 356666652 34567776543321 2234555444333210 12225788875 45799999999999999
Q ss_pred HHHHHHH
Q psy2207 295 MKAMREA 301 (305)
Q Consensus 295 i~al~~a 301 (305)
|..|-+.
T Consensus 210 I~sLvKi 216 (320)
T 3a58_A 210 IKSLITL 216 (320)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999653
No 288
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=35.91 E-value=16 Score=25.69 Aligned_cols=30 Identities=30% Similarity=0.494 Sum_probs=20.2
Q ss_pred Cccccccccccccc---ccccccccccceeccCc
Q psy2207 84 VSMCQRCTSVFTVT---FRRHHCRACGKVVCGPC 114 (305)
Q Consensus 84 ~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~C 114 (305)
--.|..|+.. .+. ...+||+.||..|-+.-
T Consensus 36 ky~CpfCgk~-~vkR~a~GIW~C~~C~~~~AGGA 68 (92)
T 3izc_m 36 RYDCSFCGKK-TVKRGAAGIWTCSCCKKTVAGGA 68 (92)
T ss_dssp CCCCSSSCSS-CCEEEETTEEECTTTCCEEECCS
T ss_pred CCcCCCCCCc-eeeecccceEEcCCCCCEEeCCc
Confidence 3469999864 222 23589999998876543
No 289
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=35.54 E-value=11 Score=27.98 Aligned_cols=56 Identities=20% Similarity=0.308 Sum_probs=6.0
Q ss_pred CeeeecCCCccccccccccccccc----------cccc----ccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 76 PLWIPDSRVSMCQRCTSVFTVTFR----------RHHC----RACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 76 p~w~~d~~~~~C~~C~~~f~~~~r----------rhhC----r~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
+.|--|-....|++|...|..... ...| -.||.+|+..|....... ...|..|-..
T Consensus 40 a~w~wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~-------~~~CP~Cr~~ 109 (117)
T 4a0k_B 40 ALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT-------RQVCPLDNRE 109 (117)
T ss_dssp EEEEECCCC--------------------------------------------------------------------
T ss_pred EEEeecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc-------CCcCCCCCCe
Confidence 456667777899999998864211 0111 269999999998775422 3578877554
No 290
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=35.35 E-value=9.8 Score=25.29 Aligned_cols=46 Identities=9% Similarity=0.099 Sum_probs=29.5
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
.-.|..|...|..-. --.||.+||..|....... ....|..|-..+
T Consensus 8 ~~~C~IC~~~~~~Pv----~~~CgH~fc~~Ci~~~~~~------~~~~CP~C~~~~ 53 (78)
T 1t1h_A 8 YFRCPISLELMKDPV----IVSTGQTYERSSIQKWLDA------GHKTCPKSQETL 53 (78)
T ss_dssp SSSCTTTSCCCSSEE----EETTTEEEEHHHHHHHHTT------TCCBCTTTCCBC
T ss_pred cCCCCCccccccCCE----EcCCCCeecHHHHHHHHHH------CcCCCCCCcCCC
Confidence 347999999875321 1269999999998665421 135576664433
No 291
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=35.33 E-value=25 Score=23.99 Aligned_cols=13 Identities=23% Similarity=0.721 Sum_probs=10.4
Q ss_pred Ccccccccccccc
Q psy2207 84 VSMCQRCTSVFTV 96 (305)
Q Consensus 84 ~~~C~~C~~~f~~ 96 (305)
.-.|..|+..|..
T Consensus 28 ~h~C~~Cgk~F~~ 40 (85)
T 2lv2_A 28 CHLCPVCGESFAS 40 (85)
T ss_dssp TEECTTSCCEESS
T ss_pred CEECCCCCCCcCc
Confidence 4579999999974
No 292
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=34.53 E-value=15 Score=23.16 Aligned_cols=26 Identities=31% Similarity=0.691 Sum_probs=16.0
Q ss_pred Cccccccccc-c-cccccccccccccce
Q psy2207 84 VSMCQRCTSV-F-TVTFRRHHCRACGKV 109 (305)
Q Consensus 84 ~~~C~~C~~~-f-~~~~rrhhCr~cg~v 109 (305)
...|..|+.. | .....|++|..||..
T Consensus 18 ~~fCPkCG~~~~ma~~~dr~~C~kCgyt 45 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAEHADRYSCGRCGYT 45 (55)
T ss_dssp SCCCTTTTTTCCCEECSSEEECTTTCCC
T ss_pred cccCcCCCCceeEeccCCEEECCCCCCE
Confidence 4578889872 2 122346777777765
No 293
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=33.75 E-value=18 Score=24.73 Aligned_cols=27 Identities=22% Similarity=0.799 Sum_probs=19.2
Q ss_pred ccccccc---cccccccccccccccceecc
Q psy2207 86 MCQRCTS---VFTVTFRRHHCRACGKVVCG 112 (305)
Q Consensus 86 ~C~~C~~---~f~~~~rrhhCr~cg~v~C~ 112 (305)
.|.+|.. -|+-......|..||.+.|.
T Consensus 34 kCp~C~n~q~VFShA~t~V~C~~Cg~~L~~ 63 (81)
T 2xzm_6 34 KCAQCQNIQMIFSNAQSTIICEKCSAILCK 63 (81)
T ss_dssp ECSSSCCEEEEETTCSSCEECSSSCCEEEE
T ss_pred ECCCCCCeeEEEecCccEEEccCCCCEEee
Confidence 5888877 45545566778888888874
No 294
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=33.73 E-value=14 Score=28.12 Aligned_cols=13 Identities=15% Similarity=0.559 Sum_probs=8.1
Q ss_pred ccccccccccccc
Q psy2207 86 MCQRCTSVFTVTF 98 (305)
Q Consensus 86 ~C~~C~~~f~~~~ 98 (305)
.|..|+..|.+..
T Consensus 72 ~C~~CG~~~~~~~ 84 (139)
T 3a43_A 72 KCRNCNYEWKLKE 84 (139)
T ss_dssp EETTTCCEEEGGG
T ss_pred ECCCCCCEEeccc
Confidence 3777777666543
No 295
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=33.66 E-value=16 Score=25.26 Aligned_cols=27 Identities=33% Similarity=0.765 Sum_probs=19.5
Q ss_pred ccccccc---cccccccccccccccceecc
Q psy2207 86 MCQRCTS---VFTVTFRRHHCRACGKVVCG 112 (305)
Q Consensus 86 ~C~~C~~---~f~~~~rrhhCr~cg~v~C~ 112 (305)
.|.+|.. -|+-......|..||.++|.
T Consensus 38 kCp~C~~~~~VFShA~t~V~C~~CgtvL~~ 67 (86)
T 3iz6_X 38 KCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 67 (86)
T ss_dssp ECTTTCCEEEEETTCSSCCCCSSSCCCCSC
T ss_pred ECCCCCCeeEEEecCCcEEEccCCCCEeec
Confidence 6888877 45545566788888888874
No 296
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.56 E-value=28 Score=22.55 Aligned_cols=55 Identities=25% Similarity=0.443 Sum_probs=26.1
Q ss_pred Ccccccccccccc---------cccccccccccceeccCccCCeecccCCCCccccccHhhHHHHHh
Q psy2207 84 VSMCQRCTSVFTV---------TFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLVQ 141 (305)
Q Consensus 84 ~~~C~~C~~~f~~---------~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~~ 141 (305)
...|..|+.+... ..+.+|- .| ..|..|...-....+......-.|..||..+.+
T Consensus 5 ~~~C~~C~~~I~~~~~~~~~~a~~~~wH~-~C--F~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~~~ 68 (72)
T 1x4l_A 5 SSGCAGCTNPISGLGGTKYISFEERQWHN-DC--FNCKKCSLSLVGRGFLTERDDILCPDCGKDISG 68 (72)
T ss_dssp SCSBTTTTBCCCCSSSCSCEECSSCEECT-TT--CBCSSSCCBCTTSCCEECSSSEECHHHHHTCCC
T ss_pred CCCCcCCCccccCCCCcceEEECCcccCc-cc--CEeccCCCcCCCCccEeECCEEEChhHcCcccC
Confidence 4567777775442 2334442 21 344555432111111112334568999876643
No 297
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.16 E-value=22 Score=23.14 Aligned_cols=26 Identities=23% Similarity=0.758 Sum_probs=19.0
Q ss_pred Cccccc--ccccccccccccccccccceecc
Q psy2207 84 VSMCQR--CTSVFTVTFRRHHCRACGKVVCG 112 (305)
Q Consensus 84 ~~~C~~--C~~~f~~~~rrhhCr~cg~v~C~ 112 (305)
...|.. |.+. .++ ...|+.||..||.
T Consensus 12 ~~~Cs~~~Ck~~-~ll--~f~C~~C~~~FC~ 39 (63)
T 1x4v_A 12 TNKCERAGCRQR-EMM--KLTCERCSRNFCI 39 (63)
T ss_dssp CCCCCSTTCCCC-CSS--CCBCSSSCCBCCH
T ss_pred CCCCCccCCCCC-Ccc--ceECCCCCcccCc
Confidence 356776 8876 222 4589999999996
No 298
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=32.94 E-value=12 Score=28.22 Aligned_cols=43 Identities=19% Similarity=0.471 Sum_probs=28.6
Q ss_pred ccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 86 MCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 86 ~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
.|.+|...|... .--.||..||..|..... .....|..|-..+
T Consensus 55 ~C~iC~~~~~~~----~~~~CgH~fc~~Ci~~~~-------~~~~~CP~Cr~~~ 97 (138)
T 4ayc_A 55 QCIICSEYFIEA----VTLNCAHSFCSYCINEWM-------KRKIECPICRKDI 97 (138)
T ss_dssp BCTTTCSBCSSE----EEETTSCEEEHHHHHHHT-------TTCSBCTTTCCBC
T ss_pred CCcccCcccCCc----eECCCCCCccHHHHHHHH-------HcCCcCCCCCCcC
Confidence 699999988532 123699999999986432 1234588885444
No 299
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=32.63 E-value=12 Score=26.69 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=31.2
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
.-.|.+|...|.. ......||.+||..|....... ...|..|-..+.
T Consensus 15 ~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~-------~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 15 HLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLET-------SKYCPICDVQVH 61 (108)
T ss_dssp GTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTS-------CSBCTTTCCBSC
T ss_pred cCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHh-------CCcCcCCCcccc
Confidence 3479999887753 1223479999999998665321 256877755443
No 300
>1vq8_1 50S ribosomal protein L37E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.2 PDB: 1vq4_1* 1vq5_1* 1vq6_1* 1vq7_1* 1s72_1* 1vq9_1* 1vqk_1* 1vql_1* 1vqm_1* 1vqn_1* 1vqo_1* 1vqp_1* 1yhq_1* 1yi2_1* 1yij_1* 1yit_1* 1yj9_1* 1yjn_1* 1yjw_1* 2otj_1* ...
Probab=32.01 E-value=17 Score=23.10 Aligned_cols=8 Identities=50% Similarity=1.406 Sum_probs=4.6
Q ss_pred ccccccce
Q psy2207 102 HCRACGKV 109 (305)
Q Consensus 102 hCr~cg~v 109 (305)
.||.||..
T Consensus 19 ~CrRCG~~ 26 (57)
T 1vq8_1 19 KCRRCGEK 26 (57)
T ss_dssp ECTTTCSE
T ss_pred cccccCCh
Confidence 46666654
No 301
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=31.62 E-value=19 Score=24.65 Aligned_cols=27 Identities=26% Similarity=0.803 Sum_probs=18.7
Q ss_pred ccccccc---cccccccccccccccceecc
Q psy2207 86 MCQRCTS---VFTVTFRRHHCRACGKVVCG 112 (305)
Q Consensus 86 ~C~~C~~---~f~~~~rrhhCr~cg~v~C~ 112 (305)
.|.+|.. -|+-......|..||.++|.
T Consensus 36 kCp~C~~~q~VFSha~t~V~C~~Cg~~L~~ 65 (82)
T 3u5c_b 36 KCPGCLNITTVFSHAQTAVTCESCSTILCT 65 (82)
T ss_dssp ECTTSCSCEEEESBCSSCCCCSSSCCCCEE
T ss_pred ECCCCCCeeEEEecCCeEEEccccCCEEec
Confidence 5888877 44445556778888888774
No 302
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=31.57 E-value=23 Score=21.14 Aligned_cols=11 Identities=27% Similarity=0.736 Sum_probs=8.7
Q ss_pred ccccccccccc
Q psy2207 86 MCQRCTSVFTV 96 (305)
Q Consensus 86 ~C~~C~~~f~~ 96 (305)
.|..|+..|..
T Consensus 6 ~C~~C~~~f~~ 16 (57)
T 3uk3_C 6 ECSYCGKFFRS 16 (57)
T ss_dssp BCTTTCCBCSC
T ss_pred cCCCCcchhCC
Confidence 58889998863
No 303
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=31.30 E-value=1e+02 Score=24.01 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=27.4
Q ss_pred CceEEEEEe----ceEEEEEeCCHHHHHHHHHHHHHHHH
Q psy2207 12 NNEFSVIAI----SRSFTLRARSANERLEWIDAIQTAIK 46 (305)
Q Consensus 12 ~~~f~i~~~----~ksf~~~a~s~~ek~~W~~~i~~ai~ 46 (305)
+..|.|.-| .-.|.|-++++.+...||.++.=|..
T Consensus 91 Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 91 KFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp EEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred eeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 445666555 45888999999999999999986644
No 304
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=31.26 E-value=14 Score=28.48 Aligned_cols=46 Identities=24% Similarity=0.440 Sum_probs=30.6
Q ss_pred cccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
-.|.+|...|..-.. -.||..||..|......- ....|..|-..+.
T Consensus 79 ~~C~IC~~~~~~pv~----~~CgH~fC~~Ci~~~~~~------~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 79 FMCVCCQELVYQPVT----TECFHNVCKDCLQRSFKA------QVFSCPACRHDLG 124 (150)
T ss_dssp TBCTTTSSBCSSEEE----CTTSCEEEHHHHHHHHHT------TCCBCTTTCCBCC
T ss_pred CEeecCChhhcCCEE----cCCCCchhHHHHHHHHHh------CCCcCCCCCccCC
Confidence 479999987753211 479999999998665421 2346777755443
No 305
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=30.55 E-value=29 Score=22.14 Aligned_cols=13 Identities=31% Similarity=0.751 Sum_probs=10.3
Q ss_pred Ccccccccccccc
Q psy2207 84 VSMCQRCTSVFTV 96 (305)
Q Consensus 84 ~~~C~~C~~~f~~ 96 (305)
.-.|..|+..|..
T Consensus 17 ~~~C~~C~k~f~~ 29 (74)
T 2lce_A 17 PYKCDRCQASFRY 29 (74)
T ss_dssp SBCCTTSSCCBSC
T ss_pred CeECCCCCceeCC
Confidence 4579999999963
No 306
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=30.52 E-value=27 Score=22.12 Aligned_cols=8 Identities=13% Similarity=0.389 Sum_probs=5.5
Q ss_pred cccccccc
Q psy2207 85 SMCQRCTS 92 (305)
Q Consensus 85 ~~C~~C~~ 92 (305)
..|..|+.
T Consensus 12 ~~Cp~C~~ 19 (58)
T 1dl6_A 12 VTCPNHPD 19 (58)
T ss_dssp CSBTTBSS
T ss_pred ccCcCCCC
Confidence 35888866
No 307
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=30.49 E-value=15 Score=26.50 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=32.4
Q ss_pred cccccccccccccc--------------cccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 85 SMCQRCTSVFTVTF--------------RRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 85 ~~C~~C~~~f~~~~--------------rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
..|.+|...|.... .......||.+||..|.......+. ......|..|-..
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~--~~~~~~CP~CR~~ 91 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGN--KDGSLQCPSCKTI 91 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTC--CSSCCBCTTTCCB
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHccc--CCCCCcCCCCCCc
Confidence 47999999885321 1112456999999999876542211 1345678888443
No 308
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=30.11 E-value=34 Score=21.98 Aligned_cols=35 Identities=23% Similarity=0.623 Sum_probs=28.4
Q ss_pred CCcccccccccc-cccccccccccccceeccCccCC
Q psy2207 83 RVSMCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 83 ~~~~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
..+.|..|+... ++.+.-..|..|+..+-.+|...
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 356799998855 45677789999999999999875
No 309
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=29.94 E-value=27 Score=23.17 Aligned_cols=33 Identities=15% Similarity=0.389 Sum_probs=26.2
Q ss_pred CCcccccccccccccccccccccccceeccCccCC
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
..+.|..|+... ++.-..|..||..+-.+|...
T Consensus 34 ~pt~C~~C~~~l--~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 34 GPGWCDLCGREV--LRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp SCCBCTTTSSBC--SSCCEECTTSSCEECTGGGGG
T ss_pred CCcchhhhhHHH--HhCcCccCCCCCeechhhhcc
Confidence 456799998866 556678999999999999753
No 310
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=29.81 E-value=25 Score=20.91 Aligned_cols=10 Identities=20% Similarity=0.770 Sum_probs=7.8
Q ss_pred cccccccccc
Q psy2207 86 MCQRCTSVFT 95 (305)
Q Consensus 86 ~C~~C~~~f~ 95 (305)
.|..|+..|.
T Consensus 3 ~C~~C~~~f~ 12 (57)
T 1bbo_A 3 ICEECGIRXK 12 (57)
T ss_dssp BCTTTCCBCS
T ss_pred cCCCCcCcCC
Confidence 4788888886
No 311
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=29.53 E-value=23 Score=24.28 Aligned_cols=33 Identities=30% Similarity=0.656 Sum_probs=24.0
Q ss_pred Ccccccccccccccccccccccccc----eeccCccCC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGK----VVCGPCSDY 117 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~----v~C~~Cs~~ 117 (305)
.-.|-.|.. .++..+|++|..|.. -+|..|-..
T Consensus 21 ~~~Cd~C~~-~pI~G~RykC~~C~d~~~yDLC~~C~~~ 57 (82)
T 2fc7_A 21 GFKCDNCGI-EPIQGVRWHCQDCPPEMSLDFCDSCSDC 57 (82)
T ss_dssp SCCCSSSCC-SSEESCEEEESSSCSSSCCEEEGGGTTC
T ss_pred cCCCCCCCC-CcceeceEECCcCCCCcceecHHHHHhC
Confidence 346888875 345678999999875 588888654
No 312
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=28.05 E-value=93 Score=25.19 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=27.9
Q ss_pred CceEEEEEec-eEEEEEeCCHHHHHHHHHHHHHH
Q psy2207 12 NNEFSVIAIS-RSFTLRARSANERLEWIDAIQTA 44 (305)
Q Consensus 12 ~~~f~i~~~~-ksf~~~a~s~~ek~~W~~~i~~a 44 (305)
.-+|.|+... -++.|.|.|+.+-..|++.|+--
T Consensus 115 ~laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~L 148 (203)
T 3a98_B 115 ELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNAL 148 (203)
T ss_dssp GGEEEEEETTTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCceEEEecCCHHHHHHHHHHHHHH
Confidence 3588887743 69999999999999999999854
No 313
>3d00_A Tungsten formylmethanofuran dehydrogenase subunit; FWDE/GAPDH domain-like fold, structural genomics, joint CENT structural genomics; HET: MSE; 1.90A {Syntrophus aciditrophicus}
Probab=28.00 E-value=38 Score=27.25 Aligned_cols=25 Identities=16% Similarity=0.651 Sum_probs=17.6
Q ss_pred CcccccccccccccccccccccccceeccCccCC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
...|..|+..+.-. |+.+|..|.+.
T Consensus 163 ~~~C~~CGE~~~~~---------g~~~C~~C~~~ 187 (191)
T 3d00_A 163 IVLCPQCREAYPAQ---------DGELCLSCQGG 187 (191)
T ss_dssp EEECTTTCCEEEGG---------GCSSCHHHHTT
T ss_pred CEECCcCCCChhhC---------CCcCCccccCC
Confidence 45788998877533 77777777653
No 314
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=27.68 E-value=30 Score=23.22 Aligned_cols=36 Identities=19% Similarity=0.574 Sum_probs=29.1
Q ss_pred CCCcccccccccc-cccccccccccccceeccCccCC
Q psy2207 82 SRVSMCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 82 ~~~~~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
...+.|..|.... ++...-..|..|+..+-.+|...
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 3467899998855 45677789999999999999875
No 315
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.56 E-value=33 Score=23.37 Aligned_cols=35 Identities=20% Similarity=0.587 Sum_probs=28.3
Q ss_pred CCcccccccccc-cccccccccccccceeccCccCC
Q psy2207 83 RVSMCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 83 ~~~~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
..+.|..|+... ++...-..|..|+..+-.+|...
T Consensus 27 ~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 27 QPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp SCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 456899998855 35666789999999999999875
No 316
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=27.51 E-value=19 Score=24.01 Aligned_cols=23 Identities=26% Similarity=0.784 Sum_probs=13.3
Q ss_pred ccccccccccc--ccccccccccccee
Q psy2207 86 MCQRCTSVFTV--TFRRHHCRACGKVV 110 (305)
Q Consensus 86 ~C~~C~~~f~~--~~rrhhCr~cg~v~ 110 (305)
.|. |+...-. ...-|.|. ||..+
T Consensus 6 ~C~-C~~~~~~~~~~kT~~C~-CG~~~ 30 (71)
T 1gh9_A 6 RCD-CGRALYSREGAKTRKCV-CGRTV 30 (71)
T ss_dssp EET-TSCCEEEETTCSEEEET-TTEEE
T ss_pred ECC-CCCEEEEcCCCcEEECC-CCCee
Confidence 577 7764432 23457776 77764
No 317
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction, DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP: a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Probab=27.21 E-value=18 Score=28.23 Aligned_cols=23 Identities=13% Similarity=0.166 Sum_probs=15.6
Q ss_pred Cccccccccccccc-cc--ccccccc
Q psy2207 84 VSMCQRCTSVFTVT-FR--RHHCRAC 106 (305)
Q Consensus 84 ~~~C~~C~~~f~~~-~r--rhhCr~c 106 (305)
...|+.|+.+|.-. .+ ..||+.|
T Consensus 20 ~g~C~IC~~~l~~~~~~~~vDHdH~~ 45 (157)
T 1e7l_A 20 NGKCLICQRELNPDVQANHLDHDHEL 45 (157)
T ss_dssp TTBCTTTCCBCCSSGGGSEEEECCCC
T ss_pred CCcCcccCCccccccccccccCCCCC
Confidence 45799999998632 22 3688754
No 318
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=27.17 E-value=28 Score=25.08 Aligned_cols=9 Identities=44% Similarity=1.209 Sum_probs=6.7
Q ss_pred ccccccccc
Q psy2207 86 MCQRCTSVF 94 (305)
Q Consensus 86 ~C~~C~~~f 94 (305)
.|..|+-.|
T Consensus 69 ~C~~CG~~F 77 (105)
T 2gmg_A 69 QCRKCGFVF 77 (105)
T ss_dssp BBTTTCCBC
T ss_pred ChhhCcCee
Confidence 577777777
No 319
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=27.12 E-value=25 Score=21.27 Aligned_cols=13 Identities=23% Similarity=0.465 Sum_probs=8.9
Q ss_pred Ccccccccccccc
Q psy2207 84 VSMCQRCTSVFTV 96 (305)
Q Consensus 84 ~~~C~~C~~~f~~ 96 (305)
...|..|+..-+-
T Consensus 4 ~~~C~~C~tt~Tp 16 (46)
T 1gnf_A 4 ARECVNCGATATP 16 (46)
T ss_dssp SCCCTTTCCCCCS
T ss_pred CCCCCCcCCCCCC
Confidence 4568888877663
No 320
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=26.72 E-value=16 Score=22.76 Aligned_cols=20 Identities=35% Similarity=0.846 Sum_probs=13.4
Q ss_pred ccccccccccccccccccccccc
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACG 107 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg 107 (305)
..|-.|... + .+|+||..|.
T Consensus 7 ~~Cd~C~~~--i-g~R~~C~~C~ 26 (52)
T 1tot_A 7 YTCNECKHH--V-ETRWHCTVCE 26 (52)
T ss_dssp EEETTTTEE--E-SSEEEESSSS
T ss_pred EECCCCCCC--C-cceEEcCCCC
Confidence 468888886 2 5677776653
No 321
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=26.67 E-value=30 Score=20.87 Aligned_cols=10 Identities=40% Similarity=1.142 Sum_probs=8.0
Q ss_pred cccccccccc
Q psy2207 86 MCQRCTSVFT 95 (305)
Q Consensus 86 ~C~~C~~~f~ 95 (305)
.|..|+..|.
T Consensus 4 ~C~~C~~~f~ 13 (60)
T 2adr_A 4 VCEVCTRAFA 13 (60)
T ss_dssp CCTTTCCCBS
T ss_pred cCCCCccccC
Confidence 5888888886
No 322
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=26.61 E-value=99 Score=30.13 Aligned_cols=37 Identities=19% Similarity=0.359 Sum_probs=30.2
Q ss_pred ceEEEEE-eceEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 13 NEFSVIA-ISRSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 13 ~~f~i~~-~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
+.|.+.. ..|.|.+.+.|+.+..+|...|+++..+..
T Consensus 618 ~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~~ 655 (689)
T 3v5w_A 618 KCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREAQ 655 (689)
T ss_dssp EEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHHHH
Confidence 4566665 567999999999999999999999876543
No 323
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=26.54 E-value=14 Score=23.76 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=22.6
Q ss_pred ecCCCcccccccccccccccccccccccce-eccCccCC
Q psy2207 80 PDSRVSMCQRCTSVFTVTFRRHHCRACGKV-VCGPCSDY 117 (305)
Q Consensus 80 ~d~~~~~C~~C~~~f~~~~rrhhCr~cg~v-~C~~Cs~~ 117 (305)
|..+...|..|...+....-.| ..||.+ +|..|+..
T Consensus 4 ~~~~~~~C~IC~~~~~~~~~~~--~pCgH~~~C~~C~~~ 40 (64)
T 2vje_A 4 PLNAIEPCVICQGRPKNGCIVH--GKTGHLMACFTCAKK 40 (64)
T ss_dssp -CGGGSCCTTTSSSCSCEEEEE--TTEEEEEECHHHHHH
T ss_pred CCCCcCCCCcCCCCCCCEEEEC--CCCCChhhHHHHHHH
Confidence 3444568999988765332111 258888 79888864
No 324
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=26.48 E-value=24 Score=24.12 Aligned_cols=47 Identities=19% Similarity=0.458 Sum_probs=29.6
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHY 138 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~ 138 (305)
.-.|.+|...|..- ..-..||..||..|......- .....|..|-..
T Consensus 13 ~~~C~IC~~~~~~p---~~~~~CgH~fC~~Ci~~~~~~-----~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 13 ELLCLICKDIMTDA---VVIPCCGNSYCDECIRTALLE-----SDEHTCPTCHQN 59 (92)
T ss_dssp TTEETTTTEECSSC---EECTTTCCEECHHHHHHHHHH-----CTTCCCTTTCCS
T ss_pred CCCCCCCChhhcCc---eECCCCCCHHHHHHHHHHHHh-----cCCCcCcCCCCc
Confidence 45799999877521 122339999999998654321 112567777544
No 325
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=26.13 E-value=21 Score=20.27 Aligned_cols=24 Identities=33% Similarity=0.839 Sum_probs=15.3
Q ss_pred cccccccccccccc--c---cccccccce
Q psy2207 86 MCQRCTSVFTVTFR--R---HHCRACGKV 109 (305)
Q Consensus 86 ~C~~C~~~f~~~~r--r---hhCr~cg~v 109 (305)
.|..|+.+-+.+.+ + ..|.+||..
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~~ 30 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGAI 30 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTEE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCCc
Confidence 48888888874432 1 457777654
No 326
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=26.08 E-value=34 Score=25.71 Aligned_cols=28 Identities=18% Similarity=0.288 Sum_probs=22.1
Q ss_pred CcccccccccccccccccccccccceeccCcc
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCS 115 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs 115 (305)
...|..|... ..-+.|..||.|-|++=+
T Consensus 34 ~~~C~~C~~~----~~LwlCL~CG~vgCgr~~ 61 (129)
T 2g45_A 34 GWKCSKCDMR----ENLWLNLTDGSILCGRRY 61 (129)
T ss_dssp BCCCSSSSCC----SSEEEETTTCCEEECCBC
T ss_pred CCcCccccCc----CceEEeccCCccccCccc
Confidence 3469999874 456899999999998754
No 327
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=25.98 E-value=17 Score=22.71 Aligned_cols=10 Identities=50% Similarity=1.085 Sum_probs=8.4
Q ss_pred cccccccccc
Q psy2207 86 MCQRCTSVFT 95 (305)
Q Consensus 86 ~C~~C~~~f~ 95 (305)
.|..|+..|.
T Consensus 16 ~C~~C~k~F~ 25 (62)
T 1vd4_A 16 KCPVCSSTFT 25 (62)
T ss_dssp ECSSSCCEEE
T ss_pred cCCCCCchhc
Confidence 6889999886
No 328
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=25.78 E-value=18 Score=29.17 Aligned_cols=25 Identities=20% Similarity=0.194 Sum_probs=13.1
Q ss_pred ccccccccccccc--c--cccccccccce
Q psy2207 85 SMCQRCTSVFTVT--F--RRHHCRACGKV 109 (305)
Q Consensus 85 ~~C~~C~~~f~~~--~--rrhhCr~cg~v 109 (305)
-.|.+|+.++... . -..||+.+|.|
T Consensus 138 G~C~ICg~~~~~~~~k~lvVDHDH~TG~V 166 (200)
T 3gox_A 138 FTCPICEKRSIVGVTANLVHDHNHDTGWG 166 (200)
T ss_dssp EECTTTCCEEEBTTTBCEEEEECTTTCCE
T ss_pred CcCcCCCCCCCcCcccceeeecccCCCcE
Confidence 3566776666521 1 13466665544
No 329
>2i50_A Ubiquitin carboxyl-terminal hydrolase 16; alpha/beta zinc-finger, ring-finger, ZNF-UBP, metalloprotein, ubiquitin-binding protein, USP; NMR {Homo sapiens}
Probab=25.60 E-value=21 Score=26.75 Aligned_cols=31 Identities=29% Similarity=0.586 Sum_probs=22.5
Q ss_pred ccccccccccc----------ccccccccccccceeccCcc
Q psy2207 85 SMCQRCTSVFT----------VTFRRHHCRACGKVVCGPCS 115 (305)
Q Consensus 85 ~~C~~C~~~f~----------~~~rrhhCr~cg~v~C~~Cs 115 (305)
..|..|...-+ ....-+.|..||.|-|++=+
T Consensus 29 ~~C~~C~~~~~~~~~~~~~~~~~~~Lw~CL~CG~vgCgr~~ 69 (126)
T 2i50_A 29 NICQDCKTDNKVKDKAEEETEEKPSVWLCLKCGHQGCGRNS 69 (126)
T ss_dssp SSCHHHHTCTTSSCSSCTTTCCCCCEEEETTTCCEEECTTS
T ss_pred CcCccccccccccccccccccccccceeeeeCCccccCCCC
Confidence 46888876422 24556899999999998765
No 330
>3j21_e 50S ribosomal protein L37E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.51 E-value=25 Score=22.69 Aligned_cols=8 Identities=63% Similarity=1.680 Sum_probs=4.3
Q ss_pred ccccccce
Q psy2207 102 HCRACGKV 109 (305)
Q Consensus 102 hCr~cg~v 109 (305)
.||.||..
T Consensus 19 lCrRCG~~ 26 (62)
T 3j21_e 19 RCRRCGRV 26 (62)
T ss_dssp BCSSSCSB
T ss_pred eecccCcc
Confidence 45555554
No 331
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=25.35 E-value=1.5e+02 Score=23.35 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=26.5
Q ss_pred ceEEEEE----eceEEEEEeCCHHHHHHHHHHHHHHHHH
Q psy2207 13 NEFSVIA----ISRSFTLRARSANERLEWIDAIQTAIKE 47 (305)
Q Consensus 13 ~~f~i~~----~~ksf~~~a~s~~ek~~W~~~i~~ai~~ 47 (305)
..+.+.- ....|.|-++++++...||.+..=|...
T Consensus 113 f~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAskG 151 (173)
T 4f7h_A 113 FNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKG 151 (173)
T ss_dssp EEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred eeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhhccC
Confidence 3444444 3568899999999999999999766543
No 332
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=25.26 E-value=37 Score=22.22 Aligned_cols=28 Identities=29% Similarity=0.781 Sum_probs=17.6
Q ss_pred CCcccccccccccccccccccccc-cceeccCcc
Q psy2207 83 RVSMCQRCTSVFTVTFRRHHCRAC-GKVVCGPCS 115 (305)
Q Consensus 83 ~~~~C~~C~~~f~~~~rrhhCr~c-g~v~C~~Cs 115 (305)
+-+=|.+|..--+ ..|..| |-++|.+|-
T Consensus 7 e~pWC~ICneDAt-----lrC~gCdgDLYC~rC~ 35 (67)
T 2d8v_A 7 GLPWCCICNEDAT-----LRCAGCDGDLYCARCF 35 (67)
T ss_dssp CCSSCTTTCSCCC-----EEETTTTSEEECSSHH
T ss_pred CCCeeEEeCCCCe-----EEecCCCCceehHHHH
Confidence 3455777877543 347777 777775554
No 333
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=25.16 E-value=24 Score=25.38 Aligned_cols=43 Identities=19% Similarity=0.275 Sum_probs=29.1
Q ss_pred CeeeecCCCccccccccccccccc--------------ccccccccceeccCccCCe
Q psy2207 76 PLWIPDSRVSMCQRCTSVFTVTFR--------------RHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 76 p~w~~d~~~~~C~~C~~~f~~~~r--------------rhhCr~cg~v~C~~Cs~~~ 118 (305)
+.|--|-....|.+|...|...-. ...-..||.+|+..|....
T Consensus 29 ~~w~~d~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~W 85 (106)
T 3dpl_R 29 ALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRW 85 (106)
T ss_dssp EEEEESSCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHH
T ss_pred eEeecCCCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHH
Confidence 466667777889999998864311 0112468899998887654
No 334
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=25.10 E-value=38 Score=22.80 Aligned_cols=28 Identities=21% Similarity=0.526 Sum_probs=20.2
Q ss_pred Cccccc--ccccccccccccccccccceeccCc
Q psy2207 84 VSMCQR--CTSVFTVTFRRHHCRACGKVVCGPC 114 (305)
Q Consensus 84 ~~~C~~--C~~~f~~~~rrhhCr~cg~v~C~~C 114 (305)
...|.. |.+. .++ .-.|+.||.+||...
T Consensus 14 g~~Cs~~~C~~~-dfl--pf~C~~C~~~FC~~H 43 (75)
T 1wys_A 14 GQHCQVQHCRQR-DFL--PFVCDGCSGIFCLEH 43 (75)
T ss_dssp CCCCSCTTTCCC-SCC--CEECTTTCCEECSTT
T ss_pred CCCcCcccCCCc-cce--eeECcccCcCcCccc
Confidence 457876 8885 222 568999999999753
No 335
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=24.91 E-value=26 Score=24.68 Aligned_cols=23 Identities=26% Similarity=0.761 Sum_probs=15.3
Q ss_pred cccccccccccc--ccccccccccce
Q psy2207 86 MCQRCTSVFTVT--FRRHHCRACGKV 109 (305)
Q Consensus 86 ~C~~C~~~f~~~--~rrhhCr~cg~v 109 (305)
.|. |+.....+ ...++|.+||..
T Consensus 50 kC~-C~~Rt~sl~r~P~~~C~~Cg~~ 74 (92)
T 2kwq_A 50 KCP-CGNRTISLDRLPKKHCSTCGLF 74 (92)
T ss_dssp ECT-TSCEEEESSSSCCSCCTTTCSC
T ss_pred ECC-CCCceeEeeeCCCCCCCCCCCC
Confidence 475 87766533 346788888876
No 336
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=24.83 E-value=19 Score=26.41 Aligned_cols=37 Identities=24% Similarity=0.460 Sum_probs=26.3
Q ss_pred CCCccccccccccccc---ccccccccccceeccCccCCe
Q psy2207 82 SRVSMCQRCTSVFTVT---FRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 82 ~~~~~C~~C~~~f~~~---~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
.....|.+|...|... .+....-.||.+||..|....
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~ 109 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDS 109 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHH
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHH
Confidence 4466899999988643 222245579999999998654
No 337
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=24.78 E-value=35 Score=30.25 Aligned_cols=39 Identities=28% Similarity=0.665 Sum_probs=27.8
Q ss_pred Ccccccccccccccccccccccccce-eccCccCCeecccCCCCccccccHhhHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKV-VCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v-~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
...|.+|...|.... -..||.+ +|..|.... +.|..|-.
T Consensus 295 ~~~C~IC~~~~~~~v----~lpCgH~~fC~~C~~~~-----------~~CP~CR~ 334 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVV----FIPCGHLVVCQECAPSL-----------RKCPICRG 334 (345)
T ss_dssp TCBCTTTSSSBCCEE----EETTCCEEECTTTGGGC-----------SBCTTTCC
T ss_pred CCCCCccCCcCCceE----EcCCCChhHhHHHHhcC-----------CcCCCCCC
Confidence 468999999775321 2369999 999998742 57877743
No 338
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.78 E-value=48 Score=22.62 Aligned_cols=36 Identities=19% Similarity=0.525 Sum_probs=28.7
Q ss_pred CCCcccccccccc-cccccccccccccceeccCccCC
Q psy2207 82 SRVSMCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 82 ~~~~~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
...+.|..|+... ++.+.-..|..|+..+-.+|...
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 3457899998854 45667789999999999999875
No 339
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=24.66 E-value=21 Score=25.94 Aligned_cols=46 Identities=17% Similarity=0.290 Sum_probs=29.4
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
.-.|.+|...|..-.. ..||.+||..|......-. ...|..|-..+
T Consensus 18 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~------~~~CP~Cr~~~ 63 (118)
T 3hct_A 18 KYECPICLMALREAVQ----TPCGHRFCKACIIKSIRDA------GHKCPVDNEIL 63 (118)
T ss_dssp GGBCTTTCSBCSSEEE----CTTSCEEEHHHHHHHHHHH------CSBCTTTCCBC
T ss_pred CCCCCcCChhhcCeEE----CCcCChhhHHHHHHHHhhC------CCCCCCCCCCc
Confidence 4579999987753211 2699999999986543211 12677774433
No 340
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=24.55 E-value=66 Score=20.40 Aligned_cols=55 Identities=15% Similarity=0.344 Sum_probs=36.6
Q ss_pred cCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHH
Q psy2207 81 DSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 81 d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
+.+...|..|+.+...-...-.|-.|...+...|.+...... .....-+|..|..
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~--~~~~~~~C~~C~~ 57 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARA--EHIKQYKCPSCSN 57 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGG--GGCSSCCCHHHHT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHh--cCCCcEECCCCcC
Confidence 345567989998874333446799999999999998753221 1124567888743
No 341
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=24.27 E-value=26 Score=22.15 Aligned_cols=22 Identities=27% Similarity=0.896 Sum_probs=14.7
Q ss_pred Cccccccccccccccccccccccc
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACG 107 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg 107 (305)
...|+.|...... +-..||.||
T Consensus 19 k~ICrkC~ARnp~--~A~~CRKCg 40 (56)
T 2ayj_A 19 KKVCRKCGALNPI--RATKCRRCH 40 (56)
T ss_dssp CEEETTTCCEECT--TCSSCTTTC
T ss_pred hhhhccccCcCCc--ccccccCCC
Confidence 4468889886653 345688766
No 342
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=23.97 E-value=31 Score=27.42 Aligned_cols=36 Identities=22% Similarity=0.411 Sum_probs=18.4
Q ss_pred CCeeeecCCCc-cccccccc-cccc----cccccccccccee
Q psy2207 75 APLWIPDSRVS-MCQRCTSV-FTVT----FRRHHCRACGKVV 110 (305)
Q Consensus 75 ~p~w~~d~~~~-~C~~C~~~-f~~~----~rrhhCr~cg~v~ 110 (305)
++.|.+|-... .|..|+.. -.++ ..-.-|..||.|+
T Consensus 11 ~~~~~~~ln~~~~CPECGs~~t~IV~D~erGE~VCsdCGLVL 52 (197)
T 3k1f_M 11 AGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVL 52 (197)
T ss_dssp --CCSSCCCCCCCCTTTCCSSCCEEEEGGGTEEEETTTCBBC
T ss_pred ccccccccccCeECcCCCCcCCeEEEeCCCCEEEEcCCCCCc
Confidence 44566554443 69999872 1222 2234566666554
No 343
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.83 E-value=24 Score=23.49 Aligned_cols=35 Identities=17% Similarity=0.551 Sum_probs=28.2
Q ss_pred CCcccccccccc-cccccccccccccceeccCccCC
Q psy2207 83 RVSMCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 83 ~~~~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
..+.|..|+... ++.+.-..|..|+..+-.+|...
T Consensus 27 ~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 27 KPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp SCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 457899998854 35567789999999999999874
No 344
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=23.71 E-value=58 Score=16.04 Aligned_cols=14 Identities=29% Similarity=0.665 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHH
Q psy2207 288 EQSYERWMKAMREA 301 (305)
Q Consensus 288 ~e~~~~Wi~al~~a 301 (305)
.++.++||+-|+..
T Consensus 7 vDSV~rWmeDLr~M 20 (22)
T 3ro3_B 7 VDSVQRWMEDLKLM 20 (26)
T ss_pred hHHHHHHHHHHHhh
Confidence 46789999998754
No 345
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=23.63 E-value=26 Score=23.38 Aligned_cols=13 Identities=23% Similarity=0.526 Sum_probs=8.1
Q ss_pred CCccccccccccc
Q psy2207 83 RVSMCQRCTSVFT 95 (305)
Q Consensus 83 ~~~~C~~C~~~f~ 95 (305)
....|..|+..=+
T Consensus 7 ~~~~C~nC~tt~T 19 (71)
T 2kae_A 7 KSFQCSNCSVTET 19 (71)
T ss_dssp -CCCCSSSCCSCC
T ss_pred CCCcCCccCCCCC
Confidence 3456777777655
No 346
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=23.55 E-value=26 Score=21.04 Aligned_cols=34 Identities=24% Similarity=0.641 Sum_probs=26.6
Q ss_pred Ccccccccccc-cccccccccccccceeccCccCC
Q psy2207 84 VSMCQRCTSVF-TVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 84 ~~~C~~C~~~f-~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
.+.|..|+... ++.+.-..|..|+..+-.+|...
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 45799998855 35667789999999999888764
No 347
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.45 E-value=21 Score=24.62 Aligned_cols=11 Identities=27% Similarity=0.782 Sum_probs=9.2
Q ss_pred ccccccccccc
Q psy2207 85 SMCQRCTSVFT 95 (305)
Q Consensus 85 ~~C~~C~~~f~ 95 (305)
-.|..|+..|.
T Consensus 25 ~~C~~C~k~f~ 35 (98)
T 2gqj_A 25 AVCPTCNVVTR 35 (98)
T ss_dssp CCCTTTCCCCS
T ss_pred cCCCCCCCChh
Confidence 46999999987
No 348
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=23.36 E-value=23 Score=24.45 Aligned_cols=32 Identities=28% Similarity=0.674 Sum_probs=22.6
Q ss_pred cccccccccccccccccccccccceeccCccCCe
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYL 118 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~ 118 (305)
.+|..|.. |+ ..-..-||.||+|+-..|....
T Consensus 16 ~~C~VC~~-~t-~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 16 EMCDVCEV-WT-AESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCTTTCC-CC-SSCCSSCSSSSSCCCHHHHHHH
T ss_pred cccCcccc-cc-ccceeccccccccccHhhcccc
Confidence 47888885 11 2334679999999988887543
No 349
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=23.23 E-value=1.6e+02 Score=19.24 Aligned_cols=34 Identities=12% Similarity=0.344 Sum_probs=25.7
Q ss_pred EEEEEeceEEEEEeC---CHHHHHHHHHHHHHHHHHH
Q psy2207 15 FSVIAISRSFTLRAR---SANERLEWIDAIQTAIKEN 48 (305)
Q Consensus 15 f~i~~~~ksf~~~a~---s~~ek~~W~~~i~~ai~~~ 48 (305)
.+-.+-.|++.|.-. +.+.+.+|+..|+...+..
T Consensus 11 lk~~g~~KsL~Lf~P~gLt~~Q~~QW~~TIeav~qSa 47 (75)
T 2fqm_A 11 LESDEHGKTLRLTLPEGLSGEQKSQWMLTIKAVVQSA 47 (75)
T ss_dssp EEEETTEEEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCceEEEeCCCCccHHHHHHHHHHHHHHHhhh
Confidence 344456788888754 8999999999998766553
No 350
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=23.19 E-value=43 Score=21.33 Aligned_cols=54 Identities=24% Similarity=0.546 Sum_probs=26.9
Q ss_pred Cccccccccccccc-------ccccccccccceeccCccCCeecccCCCCccccccHhhHHHHH
Q psy2207 84 VSMCQRCTSVFTVT-------FRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYLV 140 (305)
Q Consensus 84 ~~~C~~C~~~f~~~-------~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~~ 140 (305)
...|..|+.+.... .+.+|- .| ..|..|...-....+......-.|..||..+.
T Consensus 11 ~~~C~~C~~~i~~~e~~~~~~~~~~H~-~C--F~C~~C~~~L~~~~~~~~~g~~yC~~~y~~lf 71 (72)
T 3f6q_B 11 SATCERCKGGFAPAEKIVNSNGELYHE-QC--FVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLF 71 (72)
T ss_dssp TCBCTTTCCBCCTTCEEEEETTEEEET-TT--SSCTTTCCCCGGGCCEEETTEEECHHHHHHHT
T ss_pred CccchhcCccccCCceEEEeCcCeeCc-CC--CcccCCCCCCCCCCeEeECCeEeCHHHHHHhh
Confidence 55788888865421 223341 22 23555544322222222233456899988764
No 351
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=23.12 E-value=24 Score=25.45 Aligned_cols=46 Identities=17% Similarity=0.377 Sum_probs=29.7
Q ss_pred CcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHHHH
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYHYL 139 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~~~ 139 (305)
.-.|.+|...|..-.. -.||.+||..|........ ...|..|-..+
T Consensus 23 ~~~C~IC~~~~~~p~~----~~CgH~fC~~Ci~~~~~~~------~~~CP~Cr~~~ 68 (116)
T 1rmd_A 23 SISCQICEHILADPVE----TSCKHLFCRICILRCLKVM------GSYCPSCRYPC 68 (116)
T ss_dssp HTBCTTTCSBCSSEEE----CTTSCEEEHHHHHHHHHHT------CSBCTTTCCBC
T ss_pred CCCCCCCCcHhcCcEE----cCCCCcccHHHHHHHHhHC------cCcCCCCCCCC
Confidence 3479999988753211 3799999999986543221 24577774444
No 352
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=23.11 E-value=23 Score=23.35 Aligned_cols=29 Identities=21% Similarity=0.691 Sum_probs=20.7
Q ss_pred cccccccccccccccccccccccce-eccCccCC
Q psy2207 85 SMCQRCTSVFTVTFRRHHCRACGKV-VCGPCSDY 117 (305)
Q Consensus 85 ~~C~~C~~~f~~~~rrhhCr~cg~v-~C~~Cs~~ 117 (305)
..|..|...+.... -..||.. +|..|...
T Consensus 25 ~~C~iC~~~~~~~~----~~pCgH~~~C~~C~~~ 54 (74)
T 4ic3_A 25 KLCKICMDRNIAIV----FVPCGHLVTCKQCAEA 54 (74)
T ss_dssp TBCTTTSSSBCCEE----EETTCCBCCCHHHHTT
T ss_pred CCCCCCCCCCCCEE----EcCCCChhHHHHhhhc
Confidence 36999988765221 2368999 99999865
No 353
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=22.52 E-value=33 Score=22.04 Aligned_cols=21 Identities=29% Similarity=0.931 Sum_probs=12.7
Q ss_pred Cccccccccccccccccccccccc
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACG 107 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg 107 (305)
...|..|+.. ..+.|.|..||
T Consensus 30 l~~c~~cG~~---~~pH~vc~~CG 50 (60)
T 2zjr_Z 30 LTECPQCHGK---KLSHHICPNCG 50 (60)
T ss_dssp CEECTTTCCE---ECTTBCCTTTC
T ss_pred ceECCCCCCE---eCCceEcCCCC
Confidence 3468888883 33345566665
No 354
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=22.38 E-value=42 Score=20.24 Aligned_cols=31 Identities=23% Similarity=0.679 Sum_probs=24.8
Q ss_pred CcccccccccccccccccccccccceeccCccCC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDY 117 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~ 117 (305)
.+.|..|+... + .-..|..|+..+-.+|...
T Consensus 14 pt~C~~C~~~l--~-qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 14 LAFCDICQKFL--L-NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CEECTTSSSEE--C-SEEECTTTTCCBCSTTSSS
T ss_pred CcCCCCccccc--c-cCCEeCCCCCeEChhHHhh
Confidence 46788898743 3 6789999999999999874
No 355
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.34 E-value=35 Score=21.46 Aligned_cols=12 Identities=17% Similarity=0.575 Sum_probs=9.3
Q ss_pred cccccccccccc
Q psy2207 85 SMCQRCTSVFTV 96 (305)
Q Consensus 85 ~~C~~C~~~f~~ 96 (305)
-.|..|+..|..
T Consensus 10 ~~C~~C~k~f~~ 21 (70)
T 1x5w_A 10 EKCSECSYSCSS 21 (70)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCcccCC
Confidence 368899998863
No 356
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=22.24 E-value=35 Score=21.65 Aligned_cols=12 Identities=25% Similarity=0.614 Sum_probs=9.4
Q ss_pred cccccccccccc
Q psy2207 85 SMCQRCTSVFTV 96 (305)
Q Consensus 85 ~~C~~C~~~f~~ 96 (305)
-.|..|+..|..
T Consensus 15 ~~C~~C~k~f~~ 26 (72)
T 1x6e_A 15 YGCVECGKAFSR 26 (72)
T ss_dssp EECSSSCCEESS
T ss_pred ccCCCCCCccCC
Confidence 369999998863
No 357
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=22.04 E-value=58 Score=25.79 Aligned_cols=20 Identities=20% Similarity=0.491 Sum_probs=17.7
Q ss_pred CCHHHHHHHHHHHHHHHcCC
Q psy2207 286 DNEQSYERWMKAMREATTLS 305 (305)
Q Consensus 286 ~s~e~~~~Wi~al~~a~~~s 305 (305)
.+.+..++|..||.+++.+|
T Consensus 128 ~~~~~~~~Wr~AL~~va~~~ 147 (176)
T 3jrn_A 128 EDPEKVLKWRQALTNFAQLS 147 (176)
T ss_dssp SCHHHHHHHHHHHHHHTTSC
T ss_pred cCHHHHHHHHHHHHHHhccc
Confidence 57889999999999998875
No 358
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=21.33 E-value=43 Score=29.51 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=19.4
Q ss_pred eeecCC-Ccccccccccc-cc----cccccccccccceec
Q psy2207 78 WIPDSR-VSMCQRCTSVF-TV----TFRRHHCRACGKVVC 111 (305)
Q Consensus 78 w~~d~~-~~~C~~C~~~f-~~----~~rrhhCr~cg~v~C 111 (305)
|.||-. ...|..|+..- .+ .....-|..||.|+=
T Consensus 14 ~~~~~~~~~~Cp~Cg~~~~~iv~D~~~G~~vC~~CG~Vl~ 53 (345)
T 3k7a_M 14 RGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLS 53 (345)
T ss_dssp ---CCCCCCCCSTTCCSCCCCCCCSSSCSCCCSSSCCCCC
T ss_pred cCccccCCCcCcCCCCCCCceEEECCCCCEecCCCCeEcc
Confidence 666644 45799998852 12 233457888888763
No 359
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.08 E-value=38 Score=20.15 Aligned_cols=10 Identities=40% Similarity=1.072 Sum_probs=8.5
Q ss_pred cccccccccc
Q psy2207 86 MCQRCTSVFT 95 (305)
Q Consensus 86 ~C~~C~~~f~ 95 (305)
.|..|+..|.
T Consensus 14 ~C~~C~k~f~ 23 (54)
T 2eps_A 14 ICQSCGKGFS 23 (54)
T ss_dssp ECSSSCCEES
T ss_pred ECCCCCcccC
Confidence 6889999886
No 360
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=20.94 E-value=21 Score=24.87 Aligned_cols=18 Identities=28% Similarity=0.523 Sum_probs=14.5
Q ss_pred Ccccccccccccccccccc
Q psy2207 84 VSMCQRCTSVFTVTFRRHH 102 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhh 102 (305)
.-.|..|+.+|..+. ||.
T Consensus 21 ~iiClecGK~fK~Lk-RHL 38 (87)
T 2jsp_A 21 HIVCLECGGSFKSLK-RHL 38 (87)
T ss_dssp CEECTBTCCEESBHH-HHH
T ss_pred ceEecccchhhHHHH-HHH
Confidence 458999999999877 553
No 361
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=20.52 E-value=1.2e+02 Score=19.77 Aligned_cols=53 Identities=19% Similarity=0.310 Sum_probs=35.9
Q ss_pred cCCCcccccccccccccccccccccccceeccCccCCeecccCCCCccccccHhhHH
Q psy2207 81 DSRVSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAPLEYKKFRNFRVCEECYH 137 (305)
Q Consensus 81 d~~~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~l~~~~~~~~rvC~~C~~ 137 (305)
+.....| .|+.+...-.....|-.|...+...|.+....- .....-+|..|..
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~---~~~~~~~C~~C~~ 65 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNAD---ALPSKFLCFRCIE 65 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTS---CCCSCCCCHHHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccc---cCCCcEECCCccC
Confidence 4455678 598875433345679999999999999876321 1235678988865
No 362
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=20.50 E-value=31 Score=19.82 Aligned_cols=12 Identities=25% Similarity=0.739 Sum_probs=9.2
Q ss_pred cccccccccccc
Q psy2207 85 SMCQRCTSVFTV 96 (305)
Q Consensus 85 ~~C~~C~~~f~~ 96 (305)
-.|..|+..|..
T Consensus 13 ~~C~~C~k~f~~ 24 (48)
T 2epr_A 13 VACEICGKIFRD 24 (48)
T ss_dssp EEETTTTEEESS
T ss_pred eeCCCCCcccCC
Confidence 368899998863
No 363
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=20.37 E-value=47 Score=23.46 Aligned_cols=27 Identities=30% Similarity=0.655 Sum_probs=20.6
Q ss_pred Cccccccccccccccccccccc--ccceeccC
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRA--CGKVVCGP 113 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~--cg~v~C~~ 113 (305)
...|..|... ...-+.|.. ||.|.|++
T Consensus 25 ~~~C~~C~~~---~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 25 LGTCQDCKVQ---GPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp TTCCSSSCCC---CSSCEEECCTTCCCEECCT
T ss_pred CCcCcCcCCC---CCCceeeecccCCCcccCC
Confidence 4579999852 223379999 99999988
No 364
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=20.21 E-value=37 Score=23.39 Aligned_cols=36 Identities=19% Similarity=0.424 Sum_probs=23.9
Q ss_pred CcccccccccccccccccccccccceeccCccCCeec
Q psy2207 84 VSMCQRCTSVFTVTFRRHHCRACGKVVCGPCSDYLAP 120 (305)
Q Consensus 84 ~~~C~~C~~~f~~~~rrhhCr~cg~v~C~~Cs~~~~~ 120 (305)
.-.|.+|...|..-.- ..-..||..||..|......
T Consensus 5 ~~~C~IC~~~~~~~~~-~~l~~CgH~FC~~Cl~~~~~ 40 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQM-TTIAQCQCIFCTLCLKQYVE 40 (94)
T ss_dssp BCCCSSSCCCCBGGGE-EEETTTTEEEEHHHHHHHHH
T ss_pred CcCCcccCcccccccc-eEcCCCCCcccHHHHHHHHH
Confidence 4469999887753211 11236999999999876543
No 365
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=20.15 E-value=1.1e+02 Score=24.03 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCceEEEEEeceEEEEEeCCHHHHHHHHHHHHHHHHHHH
Q psy2207 11 YNNEFSVIAISRSFTLRARSANERLEWIDAIQTAIKENE 49 (305)
Q Consensus 11 ~~~~f~i~~~~ksf~~~a~s~~ek~~W~~~i~~ai~~~~ 49 (305)
....|.|.- +|.|.-+|++..||+.++..|-+......
T Consensus 114 ~~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky~ 151 (171)
T 3hie_A 114 ISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTF 151 (171)
T ss_dssp CTTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHTS
T ss_pred CCCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHHc
Confidence 366888877 79999999999999999998877666543
No 366
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=20.06 E-value=74 Score=21.40 Aligned_cols=33 Identities=27% Similarity=0.766 Sum_probs=21.5
Q ss_pred Cccccc--ccccccc--cccccccc-----cccceeccCccC
Q psy2207 84 VSMCQR--CTSVFTV--TFRRHHCR-----ACGKVVCGPCSD 116 (305)
Q Consensus 84 ~~~C~~--C~~~f~~--~~rrhhCr-----~cg~v~C~~Cs~ 116 (305)
..-|.. |+..... -.++..|. .||..||..|..
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~ 66 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKE 66 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTE
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCc
Confidence 444543 6554321 24557887 899999999984
Done!