Query psy2209
Match_columns 156
No_of_seqs 157 out of 1410
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 18:58:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2209.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2209hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01260 PH_CNK Connector enhan 99.9 2.5E-23 5.5E-28 132.7 11.9 89 63-152 2-96 (96)
2 cd01233 Unc104 Unc-104 pleckst 99.9 5.6E-23 1.2E-27 132.0 12.7 92 61-153 2-98 (100)
3 cd01251 PH_centaurin_alpha Cen 99.9 3.2E-22 7E-27 129.0 11.8 91 63-154 1-101 (103)
4 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 3.4E-22 7.3E-27 127.2 11.0 87 63-152 1-93 (95)
5 cd01252 PH_cytohesin Cytohesin 99.9 3E-21 6.5E-26 128.8 13.2 91 63-154 2-114 (125)
6 cd01238 PH_Tec Tec pleckstrin 99.9 1.4E-21 3.1E-26 126.7 10.8 90 62-152 1-106 (106)
7 cd01264 PH_melted Melted pleck 99.9 2.1E-21 4.5E-26 123.6 11.3 90 63-153 2-101 (101)
8 cd01247 PH_GPBP Goodpasture an 99.9 2.9E-21 6.3E-26 121.8 11.5 86 63-151 1-90 (91)
9 cd01257 PH_IRS Insulin recepto 99.9 3.8E-21 8.3E-26 123.0 12.2 88 61-151 2-100 (101)
10 cd01235 PH_SETbf Set binding f 99.9 6.4E-21 1.4E-25 122.6 12.2 89 63-152 1-100 (101)
11 cd01266 PH_Gab Gab (Grb2-assoc 99.8 3.6E-20 7.8E-25 120.5 11.2 88 64-152 2-107 (108)
12 cd01246 PH_oxysterol_bp Oxyste 99.8 8.3E-20 1.8E-24 115.0 11.8 87 63-152 1-91 (91)
13 cd01236 PH_outspread Outspread 99.8 7.3E-20 1.6E-24 117.5 11.1 88 63-151 1-102 (104)
14 cd01250 PH_centaurin Centaurin 99.8 3.1E-19 6.7E-24 113.0 11.3 89 63-152 1-94 (94)
15 cd01245 PH_RasGAP_CG5898 RAS G 99.8 1.3E-19 2.8E-24 115.0 8.9 87 64-151 2-97 (98)
16 PF00169 PH: PH domain; Inter 99.8 2.5E-18 5.5E-23 109.8 13.5 92 62-153 2-103 (104)
17 cd01230 PH_EFA6 EFA6 Pleckstri 99.8 1.9E-18 4.1E-23 113.2 11.8 92 63-154 2-112 (117)
18 cd01241 PH_Akt Akt pleckstrin 99.8 3E-18 6.5E-23 110.3 11.7 92 61-152 1-101 (102)
19 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 2.3E-18 4.9E-23 109.6 10.9 78 73-152 19-98 (98)
20 cd01253 PH_beta_spectrin Beta- 99.8 4.5E-18 9.9E-23 109.9 10.5 89 64-152 2-104 (104)
21 cd01263 PH_anillin Anillin Ple 99.7 2.4E-17 5.2E-22 108.5 9.2 91 62-152 2-122 (122)
22 KOG0930|consensus 99.7 2.4E-17 5.1E-22 120.3 9.4 93 61-154 260-376 (395)
23 PF15409 PH_8: Pleckstrin homo 99.7 1.4E-16 3.1E-21 98.8 10.1 83 65-152 1-88 (89)
24 PF15410 PH_9: Pleckstrin homo 99.7 3.6E-16 7.8E-21 103.3 11.9 91 63-153 2-118 (119)
25 cd01237 Unc112 Unc-112 pleckst 99.7 1.1E-15 2.5E-20 97.2 10.2 82 73-154 18-104 (106)
26 cd01256 PH_dynamin Dynamin ple 99.6 5.3E-15 1.2E-19 91.9 10.5 92 62-153 2-105 (110)
27 cd01254 PH_PLD Phospholipase D 99.6 9.1E-15 2E-19 96.8 11.0 78 74-152 32-121 (121)
28 smart00233 PH Pleckstrin homol 99.6 3.7E-14 8.1E-19 89.3 13.4 92 62-153 2-101 (102)
29 cd01220 PH_CDEP Chondrocyte-de 99.6 2.9E-14 6.3E-19 91.0 12.1 92 62-154 3-98 (99)
30 cd01219 PH_FGD FGD (faciogenit 99.6 6.6E-14 1.4E-18 89.9 12.0 90 62-153 3-99 (101)
31 PF15413 PH_11: Pleckstrin hom 99.6 1.6E-13 3.5E-18 89.6 13.1 89 63-152 1-112 (112)
32 cd00821 PH Pleckstrin homology 99.6 6E-14 1.3E-18 87.5 9.9 90 63-152 1-96 (96)
33 cd01234 PH_CADPS CADPS (Ca2+-d 99.5 1.7E-14 3.7E-19 90.4 6.4 93 62-155 3-112 (117)
34 cd00900 PH-like Pleckstrin hom 99.5 9.7E-13 2.1E-17 82.5 11.4 89 64-152 2-99 (99)
35 KOG1090|consensus 99.2 8.7E-12 1.9E-16 104.0 3.2 94 59-153 1632-1731(1732)
36 cd01218 PH_phafin2 Phafin2 Pl 99.2 1.5E-09 3.3E-14 69.7 11.5 92 62-154 5-99 (104)
37 cd01259 PH_Apbb1ip Apbb1ip (Am 99.2 2.6E-10 5.6E-15 73.0 7.7 90 63-152 2-107 (114)
38 KOG0932|consensus 99.1 1.3E-11 2.7E-16 97.9 1.7 103 51-153 495-617 (774)
39 cd01242 PH_ROK Rok (Rho- assoc 99.1 2.3E-09 4.9E-14 68.5 11.2 89 63-152 2-109 (112)
40 cd01239 PH_PKD Protein kinase 99.1 1E-09 2.3E-14 70.5 8.8 89 63-152 2-117 (117)
41 KOG2059|consensus 99.1 3E-10 6.5E-15 92.1 6.7 93 61-155 565-666 (800)
42 cd01243 PH_MRCK MRCK (myotonic 99.1 1E-08 2.2E-13 66.5 11.9 91 62-152 3-118 (122)
43 cd01249 PH_oligophrenin Oligop 99.0 2.6E-09 5.7E-14 68.0 8.9 87 63-150 1-102 (104)
44 KOG0690|consensus 98.9 1.6E-09 3.6E-14 82.0 5.0 94 59-154 13-117 (516)
45 cd01261 PH_SOS Son of Sevenles 98.9 5.6E-08 1.2E-12 63.2 11.0 93 62-154 5-110 (112)
46 PF14593 PH_3: PH domain; PDB: 98.8 1E-07 2.2E-12 61.1 10.0 90 58-154 10-100 (104)
47 KOG3640|consensus 98.8 1.2E-08 2.6E-13 85.2 6.0 96 59-154 988-1107(1116)
48 PLN00188 enhanced disease resi 98.7 2.2E-07 4.7E-12 76.6 10.4 95 60-154 3-110 (719)
49 KOG3751|consensus 98.6 1.3E-07 2.8E-12 74.9 7.4 95 58-152 314-423 (622)
50 PTZ00267 NIMA-related protein 98.5 3.2E-07 7E-12 73.9 8.0 97 59-155 375-478 (478)
51 cd01224 PH_Collybistin Collybi 98.5 7.7E-06 1.7E-10 52.7 12.3 90 62-151 3-105 (109)
52 KOG0521|consensus 98.5 5.7E-08 1.2E-12 81.8 3.1 92 61-153 274-368 (785)
53 cd01258 PH_syntrophin Syntroph 98.5 1E-06 2.2E-11 56.7 7.7 88 64-151 2-107 (108)
54 KOG3543|consensus 98.5 4.3E-08 9.4E-13 79.3 0.8 99 56-155 459-567 (1218)
55 cd01225 PH_Cool_Pix Cool (clon 98.4 3.9E-06 8.4E-11 53.9 8.9 80 74-153 27-109 (111)
56 KOG1117|consensus 98.3 2.7E-06 5.9E-11 71.1 8.4 92 60-151 491-599 (1186)
57 cd01240 PH_beta-ARK Beta adren 98.3 7.2E-07 1.6E-11 56.8 3.6 94 60-154 2-99 (116)
58 KOG3531|consensus 98.3 1.7E-07 3.6E-12 77.8 -0.0 91 63-154 926-1020(1036)
59 cd01262 PH_PDK1 3-Phosphoinosi 98.3 1.9E-05 4.2E-10 48.9 8.9 86 62-153 2-88 (89)
60 PLN02866 phospholipase D 98.1 3.9E-05 8.5E-10 66.0 11.6 92 61-153 182-307 (1068)
61 cd01222 PH_clg Clg (common-sit 98.1 0.00013 2.8E-09 46.3 10.9 88 62-153 5-95 (97)
62 cd01226 PH_exo84 Exocyst compl 98.0 0.00011 2.4E-09 46.6 9.3 78 76-154 20-99 (100)
63 KOG1739|consensus 98.0 6.7E-06 1.5E-10 64.9 4.5 86 61-150 24-113 (611)
64 PTZ00283 serine/threonine prot 97.9 4E-05 8.6E-10 62.2 7.7 96 60-155 372-491 (496)
65 PF15406 PH_6: Pleckstrin homo 97.9 3.9E-05 8.4E-10 49.0 5.8 67 79-150 43-110 (112)
66 PF15408 PH_7: Pleckstrin homo 97.9 6.2E-06 1.3E-10 50.3 1.3 88 64-152 1-96 (104)
67 PF12814 Mcp5_PH: Meiotic cell 97.8 0.00097 2.1E-08 44.2 11.2 89 63-152 11-120 (123)
68 cd01231 PH_Lnk LNK-family Plec 97.8 0.00017 3.7E-09 45.5 6.6 79 73-151 19-106 (107)
69 KOG1451|consensus 97.7 0.00011 2.3E-09 59.6 6.4 92 59-151 263-365 (812)
70 KOG0248|consensus 97.7 2.2E-05 4.8E-10 64.4 2.4 89 61-153 249-341 (936)
71 KOG1117|consensus 97.6 2.5E-05 5.4E-10 65.6 1.0 89 60-153 86-177 (1186)
72 KOG3723|consensus 97.5 2E-05 4.3E-10 63.6 0.2 95 58-153 732-836 (851)
73 cd01228 PH_BCR-related BCR (br 97.5 0.001 2.2E-08 41.6 6.9 83 62-152 4-93 (96)
74 cd01221 PH_ephexin Ephexin Ple 97.4 0.0028 6.2E-08 41.9 9.1 76 75-150 27-119 (125)
75 cd01223 PH_Vav Vav pleckstrin 97.3 0.0042 9.2E-08 40.5 8.7 91 63-153 6-111 (116)
76 KOG4424|consensus 97.2 0.00056 1.2E-08 55.4 5.0 94 59-153 495-595 (623)
77 PF15404 PH_4: Pleckstrin homo 97.2 0.0073 1.6E-07 42.7 10.0 30 63-92 1-32 (185)
78 cd01232 PH_TRIO Trio pleckstri 97.0 0.018 3.8E-07 37.7 9.5 53 99-153 56-112 (114)
79 KOG1738|consensus 97.0 0.00014 3E-09 59.3 -0.6 63 61-123 562-629 (638)
80 KOG3549|consensus 96.7 0.0062 1.3E-07 46.9 6.2 97 59-155 279-388 (505)
81 KOG4424|consensus 96.5 0.0069 1.5E-07 49.3 5.8 91 61-153 272-369 (623)
82 cd01248 PH_PLC Phospholipase C 96.5 0.04 8.7E-07 35.9 8.6 77 73-151 18-114 (115)
83 KOG4807|consensus 96.4 7.7E-06 1.7E-10 63.1 -10.8 78 74-153 34-114 (593)
84 KOG0705|consensus 96.3 0.0021 4.5E-08 52.3 1.8 32 120-151 446-477 (749)
85 PF15405 PH_5: Pleckstrin homo 96.3 0.081 1.8E-06 35.6 9.1 91 62-152 2-134 (135)
86 PF15411 PH_10: Pleckstrin hom 96.3 0.17 3.6E-06 33.2 10.2 87 62-149 8-116 (116)
87 KOG4236|consensus 96.2 0.01 2.2E-07 48.6 5.0 94 59-154 411-524 (888)
88 KOG1737|consensus 95.9 0.0043 9.3E-08 52.7 2.0 88 61-153 77-168 (799)
89 KOG3727|consensus 95.6 0.0013 2.8E-08 53.2 -2.2 79 74-154 378-459 (664)
90 cd01227 PH_Dbs Dbs (DBL's big 95.0 0.59 1.3E-05 31.4 9.3 52 99-152 62-114 (133)
91 KOG2070|consensus 94.3 0.096 2.1E-06 42.3 5.0 91 61-151 310-404 (661)
92 KOG0248|consensus 93.5 0.069 1.5E-06 44.7 2.9 97 58-154 355-466 (936)
93 cd01255 PH_TIAM TIAM Pleckstri 93.4 1.5 3.2E-05 29.7 8.5 79 75-153 49-154 (160)
94 KOG1264|consensus 93.2 0.22 4.7E-06 42.8 5.4 57 99-155 853-912 (1267)
95 KOG0517|consensus 91.1 0.0029 6.2E-08 57.4 -8.1 92 62-153 2300-2409(2473)
96 KOG3531|consensus 88.6 0.26 5.5E-06 42.3 1.6 93 61-155 750-846 (1036)
97 KOG3551|consensus 88.1 0.61 1.3E-05 36.8 3.3 93 59-151 290-399 (506)
98 PF08458 PH_2: Plant pleckstri 86.8 2.7 5.9E-05 27.2 5.2 35 118-153 69-103 (110)
99 KOG4407|consensus 86.5 0.022 4.8E-07 50.6 -5.8 93 60-152 922-1040(1973)
100 PF15277 Sec3-PIP2_bind: Exocy 79.5 12 0.00027 23.2 8.7 76 76-153 4-88 (91)
101 KOG3523|consensus 76.7 3.5 7.6E-05 34.5 3.6 33 118-150 554-591 (695)
102 KOG3521|consensus 76.3 5.2 0.00011 34.0 4.5 89 62-153 428-526 (846)
103 KOG3551|consensus 74.8 5.9 0.00013 31.5 4.2 35 120-154 237-272 (506)
104 PF06017 Myosin_TH1: Myosin ta 73.9 29 0.00064 24.7 9.4 84 59-144 48-137 (199)
105 PF04714 BCL_N: BCL7, N-termin 73.7 2.3 5E-05 23.4 1.3 20 73-92 28-47 (52)
106 KOG2996|consensus 61.6 26 0.00056 29.6 5.5 93 61-153 406-511 (865)
107 KOG4095|consensus 60.8 3.9 8.5E-05 27.9 0.7 19 73-91 29-47 (165)
108 KOG1264|consensus 60.4 17 0.00036 32.0 4.4 34 59-92 473-508 (1267)
109 KOG3520|consensus 59.8 22 0.00047 32.3 5.1 90 61-154 621-722 (1167)
110 PF14844 PH_BEACH: PH domain a 57.2 46 0.00099 20.9 6.8 50 98-147 54-103 (106)
111 KOG4047|consensus 56.9 8.1 0.00018 31.1 2.0 90 61-153 8-117 (429)
112 cd05128 RasGAP_GAP1_like The G 51.0 3.5 7.7E-05 31.8 -0.8 24 60-83 285-315 (315)
113 cd05394 RasGAP_RASA2 RASA2 (or 50.9 2.8 6E-05 32.3 -1.4 23 61-83 283-312 (313)
114 cd05134 RasGAP_RASA3 RASA3 (or 49.1 4.4 9.5E-05 31.3 -0.6 24 60-83 279-309 (310)
115 KOG0592|consensus 43.7 70 0.0015 26.9 5.3 84 62-152 452-536 (604)
116 cd05135 RasGAP_RASAL Ras GTPas 39.9 8.4 0.00018 30.0 -0.3 25 59-83 301-333 (333)
117 PF14784 ECIST_Cterm: C-termin 37.8 1.1E+02 0.0023 20.4 4.7 16 136-151 96-111 (126)
118 KOG1170|consensus 30.9 1.6 3.5E-05 37.7 -5.8 77 74-152 17-93 (1099)
119 PF07831 PYNP_C: Pyrimidine nu 30.2 62 0.0013 19.3 2.4 30 127-156 46-75 (75)
120 KOG1729|consensus 29.1 12 0.00026 28.6 -1.0 90 63-153 48-140 (288)
121 KOG2677|consensus 26.9 1.6E+02 0.0034 25.6 4.9 79 73-151 466-569 (922)
122 KOG0689|consensus 26.4 84 0.0018 25.7 3.2 33 119-151 323-358 (448)
123 KOG1450|consensus 25.7 58 0.0013 27.9 2.3 80 74-153 272-363 (650)
124 PF02831 gpW: gpW; InterPro: 25.5 1.5E+02 0.0032 17.4 3.4 33 122-155 24-56 (68)
125 KOG4471|consensus 22.8 2.9E+02 0.0063 23.7 5.7 35 120-154 102-137 (717)
126 COG4026 Uncharacterized protei 22.4 1.2E+02 0.0027 22.4 3.1 23 131-153 250-272 (290)
127 PLN03194 putative disease resi 20.8 1.1E+02 0.0024 21.9 2.6 19 138-156 133-151 (187)
128 KOG1329|consensus 20.8 87 0.0019 27.9 2.5 85 62-150 176-266 (887)
129 PF11423 Repressor_Mnt: Regula 20.1 29 0.00062 16.7 -0.3 9 1-9 19-27 (30)
No 1
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.91 E-value=2.5e-23 Score=132.72 Aligned_cols=89 Identities=31% Similarity=0.624 Sum_probs=78.8
Q ss_pred EEEEEEeccC--C----CceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 63 HSGWLHKKSG--R----NWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 63 ~~G~L~k~~~--k----~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
++|||+|+++ + .|++|||||.++.|+||+++.+..+.+.|+|.++++....+. .++++|.|.+++.++|+|+|
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~-~k~~~F~I~~~~~~~~~f~a 80 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKEV-KKKYAFKVCHPVYKSFYFAA 80 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchhc-CCceEEEECCCCCcEEEEEe
Confidence 6899999864 3 899999999999999999999999999999999988765443 37799999966669999999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMREA 152 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a 152 (156)
+|+++++.||.+|+.|
T Consensus 81 ~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 81 ETLDDLSQWVNHLITA 96 (96)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 9999999999999876
No 2
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.90 E-value=5.6e-23 Score=131.98 Aligned_cols=92 Identities=16% Similarity=0.271 Sum_probs=80.1
Q ss_pred CcEEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCC---CceeEEEEEeCCCccEEEE
Q psy2209 61 SQHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQD---NFKYVFQLKHQGQDPLVFG 135 (156)
Q Consensus 61 ~~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~---~~~~~f~i~~~~~~~~~~~ 135 (156)
+.++|||.|+++ +.|++|||+|+++.|+||+++.+..+.+.|+|.++.+...++.. +++++|.|. +..++|+|+
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~-t~~rt~~~~ 80 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAVC-TKHRGYLFQ 80 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEEE-CCCCEEEEE
Confidence 468999999986 58999999999999999999998899999999988777655432 357899998 778999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q psy2209 136 ADNEQSYERWMKAMREAT 153 (156)
Q Consensus 136 a~s~~~~~~Wi~al~~a~ 153 (156)
|+|++++.+||.+|+...
T Consensus 81 A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 81 ALSDKEMIDWLYALNPLY 98 (100)
T ss_pred cCCHHHHHHHHHHhhhhh
Confidence 999999999999997653
No 3
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.89 E-value=3.2e-22 Score=129.03 Aligned_cols=91 Identities=22% Similarity=0.389 Sum_probs=74.5
Q ss_pred EEEEEEeccC---CCceEEEEEEeCCeEEEEccCCCcccceEEEccCe----EEEEc-cC--CCCceeEEEEEeCCCccE
Q psy2209 63 HSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGY----ELEAL-NE--QDNFKYVFQLKHQGQDPL 132 (156)
Q Consensus 63 ~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~----~~~~~-~~--~~~~~~~f~i~~~~~~~~ 132 (156)
++|||.|+|+ +.|++|||+|+++.|+||+++.+..+.|.|+|..+ .+... ++ .....++|.|. +.+++|
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~-t~~Rty 79 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLV-TPERKF 79 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEE-eCCeEE
Confidence 4799999985 58999999999999999999999999999999643 33221 11 11223599998 668999
Q ss_pred EEEcCCHHHHHHHHHHHHHHHh
Q psy2209 133 VFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 133 ~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
+|+|+|++++.+||+||+.|..
T Consensus 80 ~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 80 LFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred EEECCCHHHHHHHHHHHHHHhc
Confidence 9999999999999999999864
No 4
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.89 E-value=3.4e-22 Score=127.17 Aligned_cols=87 Identities=25% Similarity=0.499 Sum_probs=75.0
Q ss_pred EEEEEEeccC----CCceEEEEEEe--CCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 63 HSGWLHKKSG----RNWKRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 63 ~~G~L~k~~~----k~Wk~r~~vL~--~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
.+|||+|+++ +.|++|||||. ++.|+||+++.+..|.|.|+|.++.+...++. .++.|.|. +.+++|+|+|
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~~~~~~~~--~~~~F~i~-t~~r~y~l~A 77 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAAFTYDPRE--EKGRFEIH-SNNEVIALKA 77 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccEEEcCCCC--CCCEEEEE-cCCcEEEEEC
Confidence 3799999875 58999999997 45899999999999999999999777654333 36899998 6788999999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMREA 152 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a 152 (156)
+|++++..||.+|+.+
T Consensus 78 ~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 78 SSDKQMNYWLQALQSK 93 (95)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999875
No 5
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.87 E-value=3e-21 Score=128.76 Aligned_cols=91 Identities=24% Similarity=0.632 Sum_probs=79.2
Q ss_pred EEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCC-----------
Q psy2209 63 HSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ----------- 129 (156)
Q Consensus 63 ~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~----------- 129 (156)
++|||.|+++ +.|++|||+|.++.|+||+++.+..+.+.|+|.++.+...++ ..++++|.|..+.+
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~~~v~~~~~-~~~~~~F~i~~~~~~~~i~~~~~~~ 80 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENVSIREVED-PSKPFCFELFSPSDKQQIKACKTES 80 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCCCCceEEEECCCcEEEEccc-CCCCeeEEEECCccccccccccccc
Confidence 6899999986 599999999999999999998888899999999888766644 34678999986554
Q ss_pred ---------ccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 130 ---------DPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 130 ---------~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
+.|+|+|+|++++.+||++|+.+..
T Consensus 81 ~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 81 DGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred cccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 6788999999999999999998875
No 6
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.87 E-value=1.4e-21 Score=126.65 Aligned_cols=90 Identities=26% Similarity=0.330 Sum_probs=73.8
Q ss_pred cEEEEEEeccC-------CCceEEEEEEeCCeEEEEccCCCc--ccceEEEccCeEEEEccCC-C------CceeEEEEE
Q psy2209 62 QHSGWLHKKSG-------RNWKRYWFVLKDQVMYKYKASEDI--KALLSIPVLGYELEALNEQ-D------NFKYVFQLK 125 (156)
Q Consensus 62 ~~~G~L~k~~~-------k~Wk~r~~vL~~~~L~~yk~~~~~--~~~~~i~L~~~~~~~~~~~-~------~~~~~f~i~ 125 (156)
+++|||.|++. +.|++|||||+++.|+||+++.+. .+.|.|+|.++..+..... . .+.++|+|.
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~ 80 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVV 80 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEEEE
Confidence 36899999862 389999999999999999997763 6899999998876653221 1 246899998
Q ss_pred eCCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 126 HQGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 126 ~~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
+..++||++|+|++++++||++|+.+
T Consensus 81 -t~~r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 81 -HDEGTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred -eCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence 56678999999999999999999863
No 7
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.87 E-value=2.1e-21 Score=123.65 Aligned_cols=90 Identities=19% Similarity=0.337 Sum_probs=76.2
Q ss_pred EEEEEEeccC-----CCceEEEEEEeCCeEEEEccCCCcccc-eEEEccCeEEEEccCCC----CceeEEEEEeCCCccE
Q psy2209 63 HSGWLHKKSG-----RNWKRYWFVLKDQVMYKYKASEDIKAL-LSIPVLGYELEALNEQD----NFKYVFQLKHQGQDPL 132 (156)
Q Consensus 63 ~~G~L~k~~~-----k~Wk~r~~vL~~~~L~~yk~~~~~~~~-~~i~L~~~~~~~~~~~~----~~~~~f~i~~~~~~~~ 132 (156)
.+|||.++++ |.|++|||+|+++.|+||+......+. +.|+|..+..+...+.. .++++|.|. +..++|
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~-tp~rt~ 80 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIF-TADKTY 80 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEE-cCCceE
Confidence 5899999887 499999999999999999987666665 99999998876654332 235999998 777999
Q ss_pred EEEcCCHHHHHHHHHHHHHHH
Q psy2209 133 VFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 133 ~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+|+|+|++++++||++|..|.
T Consensus 81 ~l~A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 81 ILKAKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred EEEeCCHHHHHHHHHHHHhhC
Confidence 999999999999999998773
No 8
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.87 E-value=2.9e-21 Score=121.77 Aligned_cols=86 Identities=23% Similarity=0.280 Sum_probs=73.4
Q ss_pred EEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCc--ccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCC
Q psy2209 63 HSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDI--KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADN 138 (156)
Q Consensus 63 ~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s 138 (156)
.+|||.|.+. +.|++|||||.++.|+||+++.+. .+.|.|+|.++.+...+ ..++.|.|..++.++|+|.|+|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~~---~~~~~F~i~~~~~r~~~L~A~s 77 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKKAIIAAHE---FDENRFDISVNENVVWYLRAEN 77 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccCcCCCcEEEECcccEEEcCC---CCCCEEEEEeCCCeEEEEEeCC
Confidence 3799999987 699999999999999999997764 46999999998766442 2357999975666999999999
Q ss_pred HHHHHHHHHHHHH
Q psy2209 139 EQSYERWMKAMRE 151 (156)
Q Consensus 139 ~~~~~~Wi~al~~ 151 (156)
+++++.||++|++
T Consensus 78 ~~e~~~Wi~al~~ 90 (91)
T cd01247 78 SQSRLLWMDSVVR 90 (91)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999975
No 9
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.87 E-value=3.8e-21 Score=122.95 Aligned_cols=88 Identities=19% Similarity=0.348 Sum_probs=75.4
Q ss_pred CcEEEEEEeccCCCceEEEEEEeCC------eEEEEccCCC-----cccceEEEccCeEEEEccCCCCceeEEEEEeCCC
Q psy2209 61 SQHSGWLHKKSGRNWKRYWFVLKDQ------VMYKYKASED-----IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQ 129 (156)
Q Consensus 61 ~~~~G~L~k~~~k~Wk~r~~vL~~~------~L~~yk~~~~-----~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~ 129 (156)
+.++|||.|+ +.|++|||||+++ .|.||+++.. ..|.+.|+|.+|..+.......++++|.|. +.+
T Consensus 2 v~k~GyL~K~--K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~-t~d 78 (101)
T cd01257 2 VRKSGYLRKQ--KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALY-TRD 78 (101)
T ss_pred ccEEEEEeEe--cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEE-eCC
Confidence 6799999997 8999999999877 7999999865 668999999999877644334456999998 555
Q ss_pred ccEEEEcCCHHHHHHHHHHHHH
Q psy2209 130 DPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 130 ~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
++|+|+|+|++++++|+.+|..
T Consensus 79 r~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 79 EYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred ceEEEEeCCHHHHHHHHHHHhh
Confidence 8999999999999999999964
No 10
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.87 E-value=6.4e-21 Score=122.58 Aligned_cols=89 Identities=26% Similarity=0.438 Sum_probs=74.4
Q ss_pred EEEEEEeccC--CCceEEEEEEe--CCeEEEEccCCCcccceEEEccCeEEEEcc-CC------CCceeEEEEEeCCCcc
Q psy2209 63 HSGWLHKKSG--RNWKRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEALN-EQ------DNFKYVFQLKHQGQDP 131 (156)
Q Consensus 63 ~~G~L~k~~~--k~Wk~r~~vL~--~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~-~~------~~~~~~f~i~~~~~~~ 131 (156)
++|||.|+++ +.|++|||||. ++.|+||+++.+..+.|.|+|..++.+... +. ....+.|.|. +..++
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~-t~~r~ 79 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLK-TSKRT 79 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEE-eCCce
Confidence 4799999987 59999999998 459999999988999999999987665531 11 1234788887 67889
Q ss_pred EEEEcCCHHHHHHHHHHHHHH
Q psy2209 132 LVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a 152 (156)
|+|+|++.+++.+||.+|+.+
T Consensus 80 ~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 80 YNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred EEEECCCHHHHHHHHHHHHhh
Confidence 999999999999999999876
No 11
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.84 E-value=3.6e-20 Score=120.53 Aligned_cols=88 Identities=25% Similarity=0.396 Sum_probs=73.2
Q ss_pred EEEEEeccC------CCceEEEEEEeCCe-------EEEEccCCCcccceEEEccCeEEEEcc-----CCCCceeEEEEE
Q psy2209 64 SGWLHKKSG------RNWKRYWFVLKDQV-------MYKYKASEDIKALLSIPVLGYELEALN-----EQDNFKYVFQLK 125 (156)
Q Consensus 64 ~G~L~k~~~------k~Wk~r~~vL~~~~-------L~~yk~~~~~~~~~~i~L~~~~~~~~~-----~~~~~~~~f~i~ 125 (156)
+|||.|+++ +.|++|||||.++. |+||+++.+..+.|.|+|..+..+... ......+.|.|.
T Consensus 2 eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~ 81 (108)
T cd01266 2 EGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIE 81 (108)
T ss_pred ceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCccEEEcccccccccCcccceEEEEE
Confidence 799999876 39999999999876 599999988999999999987665331 112234789998
Q ss_pred eCCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 126 HQGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 126 ~~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
+..++|+|+|+|++++.+||.+|++.
T Consensus 82 -t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 82 -TIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred -eCCccEEEEECCHHHHHHHHHHHHhh
Confidence 66789999999999999999999875
No 12
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.84 E-value=8.3e-20 Score=114.96 Aligned_cols=87 Identities=26% Similarity=0.548 Sum_probs=75.3
Q ss_pred EEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCc--ccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCC
Q psy2209 63 HSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDI--KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADN 138 (156)
Q Consensus 63 ~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~--~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s 138 (156)
++|||.|+++ +.|++|||+|.++.|+||+++.+. .+.+.|+|.++.+.... ..+++|.|..++++.++|+|+|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~F~i~~~~~~~~~~~a~s 77 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSGAVISEDD---SDDKCFTIDTGGDKTLHLRANS 77 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccCCCCceEEEEeceEEEEECC---CCCcEEEEEcCCCCEEEEECCC
Confidence 4799999875 599999999999999999998877 78999999988765432 2368999986666899999999
Q ss_pred HHHHHHHHHHHHHH
Q psy2209 139 EQSYERWMKAMREA 152 (156)
Q Consensus 139 ~~~~~~Wi~al~~a 152 (156)
.+++..||.+|+.|
T Consensus 78 ~~e~~~Wi~al~~a 91 (91)
T cd01246 78 EEERQRWVDALELA 91 (91)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999875
No 13
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.83 E-value=7.3e-20 Score=117.49 Aligned_cols=88 Identities=15% Similarity=0.287 Sum_probs=70.9
Q ss_pred EEEEEEeccC-----------CCceEEEEEEe-CCeEEEEccC-CCcccceEEEccCeEEEEccC-CCCceeEEEEEeCC
Q psy2209 63 HSGWLHKKSG-----------RNWKRYWFVLK-DQVMYKYKAS-EDIKALLSIPVLGYELEALNE-QDNFKYVFQLKHQG 128 (156)
Q Consensus 63 ~~G~L~k~~~-----------k~Wk~r~~vL~-~~~L~~yk~~-~~~~~~~~i~L~~~~~~~~~~-~~~~~~~f~i~~~~ 128 (156)
++|||.+.++ |.|++|||||. ++.|+||++. .+..++|.|+|..+..+...+ ...++++|.|. +.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~-tp 79 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEARTGQKFSICIL-TP 79 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccceEEEeecccccCCccEEEEE-CC
Confidence 4799999753 48999999997 5788887665 467889999998877665433 23346899998 77
Q ss_pred CccEEEEcCCHHHHHHHHHHHHH
Q psy2209 129 QDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 129 ~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
+++|+|.|+|++|+++||.+|..
T Consensus 80 ~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 80 DKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CceEEEEeCCHHHHHHHHHHHHh
Confidence 79999999999999999999963
No 14
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=3.1e-19 Score=112.99 Aligned_cols=89 Identities=25% Similarity=0.503 Sum_probs=74.6
Q ss_pred EEEEEEeccC---CCceEEEEEEeCCeEEEEccCCC--cccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcC
Q psy2209 63 HSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGAD 137 (156)
Q Consensus 63 ~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~--~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~ 137 (156)
++|||.++++ +.|++|||+|.++.|+||+++.+ ..+.+.|+|..+.+....+...++++|+|.. ..+.|+|+|+
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~-~~~~~~f~a~ 79 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRRCTVRHNGKQPDRRFCFEVIS-PTKTWHFQAD 79 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccceEEecCccccCCceEEEEEc-CCcEEEEECC
Confidence 4799999864 48999999999999999998776 5568899998887766655433679999984 4489999999
Q ss_pred CHHHHHHHHHHHHHH
Q psy2209 138 NEQSYERWMKAMREA 152 (156)
Q Consensus 138 s~~~~~~Wi~al~~a 152 (156)
|.+++..|+.||+.+
T Consensus 80 s~~~~~~Wi~al~~~ 94 (94)
T cd01250 80 SEEERDDWISAIQES 94 (94)
T ss_pred CHHHHHHHHHHHhcC
Confidence 999999999999753
No 15
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.82 E-value=1.3e-19 Score=115.01 Aligned_cols=87 Identities=15% Similarity=0.240 Sum_probs=74.8
Q ss_pred EEEEEeccC---CCceEEEEEEeC----CeEEEEccCCCcccceEEEccCeEEEEccCC-CCceeEEEEEeCCC-ccEEE
Q psy2209 64 SGWLHKKSG---RNWKRYWFVLKD----QVMYKYKASEDIKALLSIPVLGYELEALNEQ-DNFKYVFQLKHQGQ-DPLVF 134 (156)
Q Consensus 64 ~G~L~k~~~---k~Wk~r~~vL~~----~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~-~~~~~~f~i~~~~~-~~~~~ 134 (156)
.|||.|+++ |.|++|||+|.+ ..|+||+.+.+.+|.|.|+|.++.+..+.+. .++++||+|..+.. .+|++
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~~ 81 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVYYS 81 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeeccccEEEEccccccCCCeEEEEecCCCCeEEEE
Confidence 589998876 589999999987 9999999999999999999999977766544 35789999985554 58899
Q ss_pred EcCCHHHHHHHHHHHHH
Q psy2209 135 GADNEQSYERWMKAMRE 151 (156)
Q Consensus 135 ~a~s~~~~~~Wi~al~~ 151 (156)
+|++ +++++||.+|++
T Consensus 82 ~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 82 CRSS-EERDKWIESLQA 97 (98)
T ss_pred eCCH-HHHHHHHHHHhc
Confidence 9999 999999999975
No 16
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.80 E-value=2.5e-18 Score=109.78 Aligned_cols=92 Identities=32% Similarity=0.599 Sum_probs=81.8
Q ss_pred cEEEEEEecc--CCCceEEEEEEeCCeEEEEccCC---CcccceEEEccCeEEEEccCC-----CCceeEEEEEeCCCcc
Q psy2209 62 QHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASE---DIKALLSIPVLGYELEALNEQ-----DNFKYVFQLKHQGQDP 131 (156)
Q Consensus 62 ~~~G~L~k~~--~k~Wk~r~~vL~~~~L~~yk~~~---~~~~~~~i~L~~~~~~~~~~~-----~~~~~~f~i~~~~~~~ 131 (156)
.++|||.+++ .+.|++|||+|.++.|+||+++. ...+.+.|+|.++.+....+. ...+++|.|..++++.
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~ 81 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKS 81 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEE
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeCCCcE
Confidence 5899999998 36999999999999999999988 567899999999988876655 3567999999888779
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q psy2209 132 LVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
++|+|+|++++..|+.+|+.|+
T Consensus 82 ~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 82 YLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999886
No 17
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=1.9e-18 Score=113.19 Aligned_cols=92 Identities=17% Similarity=0.337 Sum_probs=79.4
Q ss_pred EEEEEEecc------------CCCceEEEEEEeCCeEEEEccCCC-------cccceEEEccCeEEEEccCCCCceeEEE
Q psy2209 63 HSGWLHKKS------------GRNWKRYWFVLKDQVMYKYKASED-------IKALLSIPVLGYELEALNEQDNFKYVFQ 123 (156)
Q Consensus 63 ~~G~L~k~~------------~k~Wk~r~~vL~~~~L~~yk~~~~-------~~~~~~i~L~~~~~~~~~~~~~~~~~f~ 123 (156)
++|+|.+|- .+.|+++||||.|+.|++|+++.. ......|.|.++.+.+..+..+++++|.
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~ 81 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHVFR 81 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcEEE
Confidence 578888762 248999999999999999999864 2336789999999888888888999999
Q ss_pred EEeCCCccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 124 LKHQGQDPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 124 i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
|..++++.|+|+|.+.++|+.||.+|+.++.
T Consensus 82 L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~ 112 (117)
T cd01230 82 LRTADWREFLFQTSSLKELQSWIERINVVAA 112 (117)
T ss_pred EEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 9988889999999999999999999998764
No 18
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.79 E-value=3e-18 Score=110.33 Aligned_cols=92 Identities=20% Similarity=0.446 Sum_probs=66.8
Q ss_pred CcEEEEEEeccC--CCceEEEEEEe-CCeEEEEccCCCcccceEEEccCeEEEEc---cCCCCceeEEEEEeCC-C--cc
Q psy2209 61 SQHSGWLHKKSG--RNWKRYWFVLK-DQVMYKYKASEDIKALLSIPVLGYELEAL---NEQDNFKYVFQLKHQG-Q--DP 131 (156)
Q Consensus 61 ~~~~G~L~k~~~--k~Wk~r~~vL~-~~~L~~yk~~~~~~~~~~i~L~~~~~~~~---~~~~~~~~~f~i~~~~-~--~~ 131 (156)
++++|||.|+++ +.|++|||+|. ++.|+||+++......+.++|.+..+... .....+++.|.|...+ . ..
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~ 80 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIE 80 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcccC
Confidence 358999999987 69999999998 78899888765444456777777664221 1123356899997222 1 11
Q ss_pred EEEEcCCHHHHHHHHHHHHHH
Q psy2209 132 LVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a 152 (156)
-+|+|+|++++++||.||+.+
T Consensus 81 r~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 81 RTFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred EEEEeCCHHHHHHHHHHHHhh
Confidence 266799999999999999876
No 19
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.79 E-value=2.3e-18 Score=109.60 Aligned_cols=78 Identities=12% Similarity=0.116 Sum_probs=65.8
Q ss_pred CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCC--CCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHH
Q psy2209 73 RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQ--DNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 73 k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~--~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
+.|++|||+|++..|+||+++. ..+.|.|+|.....+...+. ...+++|+|.+ ..++|||+|+|++|+++||.||+
T Consensus 19 ~n~KkRwF~Lt~~~L~Y~k~~~-~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt-~~r~~yi~a~s~~E~~~Wi~al~ 96 (98)
T cd01244 19 LHFKKRYFQLTTTHLSWAKDVQ-CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVC-EDDTMQLQFEAPVEATDWLNALE 96 (98)
T ss_pred cCCceeEEEECCCEEEEECCCC-CceeeeEEccceEEEEEcCCcccCCCceEEEEe-CCCeEEEECCCHHHHHHHHHHHh
Confidence 4899999999999999999865 57899999988877764332 23458999984 55799999999999999999998
Q ss_pred HH
Q psy2209 151 EA 152 (156)
Q Consensus 151 ~a 152 (156)
++
T Consensus 97 k~ 98 (98)
T cd01244 97 KQ 98 (98)
T ss_pred cC
Confidence 64
No 20
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.77 E-value=4.5e-18 Score=109.91 Aligned_cols=89 Identities=25% Similarity=0.424 Sum_probs=71.8
Q ss_pred EEEEEecc----------CCCceEEEEEEeCCeEEEEccCCCc--ccce--EEEccCeEEEEccCCCCceeEEEEEeCCC
Q psy2209 64 SGWLHKKS----------GRNWKRYWFVLKDQVMYKYKASEDI--KALL--SIPVLGYELEALNEQDNFKYVFQLKHQGQ 129 (156)
Q Consensus 64 ~G~L~k~~----------~k~Wk~r~~vL~~~~L~~yk~~~~~--~~~~--~i~L~~~~~~~~~~~~~~~~~f~i~~~~~ 129 (156)
+|+|.++. .+.|++|||+|.++.|+||+++... ...+ .|++.++.+....+..+++++|.|..+++
T Consensus 2 ~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~ 81 (104)
T cd01253 2 EGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPDG 81 (104)
T ss_pred CceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCCEEEecCCcccCceEEEEEecCC
Confidence 57777542 1489999999999999999987644 2233 67777777777666556779999987888
Q ss_pred ccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 130 DPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 130 ~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
+.|+|+|+|++++..|+.+|+.+
T Consensus 82 ~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 82 AEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred CEEEEECCCHHHHHHHHHHHhcC
Confidence 99999999999999999999753
No 21
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.73 E-value=2.4e-17 Score=108.51 Aligned_cols=91 Identities=15% Similarity=0.240 Sum_probs=71.5
Q ss_pred cEEEEEEecc----CCCceEEEEEEeCCeEEEEccCCC---cccceEEEccCeEEEEcc----CCCCceeEEEEEe--CC
Q psy2209 62 QHSGWLHKKS----GRNWKRYWFVLKDQVMYKYKASED---IKALLSIPVLGYELEALN----EQDNFKYVFQLKH--QG 128 (156)
Q Consensus 62 ~~~G~L~k~~----~k~Wk~r~~vL~~~~L~~yk~~~~---~~~~~~i~L~~~~~~~~~----~~~~~~~~f~i~~--~~ 128 (156)
.+.|||.... -+.|++|||+|.|+.|+||+.+.+ ..|.|.|+|.++...... +...+++.|.|.. +.
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~ 81 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPK 81 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEeccc
Confidence 4789999732 269999999999999999997766 567999999998876653 2344778898852 11
Q ss_pred -----------------CccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 129 -----------------QDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 129 -----------------~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
..-++|+|+|.+++.+|+.+|+.|
T Consensus 82 ~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 82 METDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 112689999999999999999864
No 22
>KOG0930|consensus
Probab=99.73 E-value=2.4e-17 Score=120.28 Aligned_cols=93 Identities=24% Similarity=0.556 Sum_probs=80.5
Q ss_pred CcEEEEEEeccC---CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeC----------
Q psy2209 61 SQHSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQ---------- 127 (156)
Q Consensus 61 ~~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~---------- 127 (156)
+..+|||.|.++ +.||+|||+|.+++||||....|.+|.|.|+|.+..+..+. .+.+|+||.|+.+
T Consensus 260 pdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTDKEPrGIIpLeNlsir~Ve-dP~kP~cfEly~ps~~gq~IKAC 338 (395)
T KOG0930|consen 260 PDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVE-DPKKPNCFELYIPSNKGQVIKAC 338 (395)
T ss_pred ccccceeeeecCCcccchhheeEEeecceeeeeeeccCCCCCcceeccccceeecc-CCCCCCeEEEecCCCCcCeeeee
Confidence 568999999986 49999999999999999999999999999999998887774 4558999999742
Q ss_pred -----------CCccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 128 -----------GQDPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 128 -----------~~~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
.+.+|.++|.+.+++.+||.+|+.+..
T Consensus 339 KTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 339 KTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred cccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 235788999999999999999987653
No 23
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.71 E-value=1.4e-16 Score=98.76 Aligned_cols=83 Identities=25% Similarity=0.473 Sum_probs=71.4
Q ss_pred EEEEeccC---CCceEEEEEE--eCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCH
Q psy2209 65 GWLHKKSG---RNWKRYWFVL--KDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNE 139 (156)
Q Consensus 65 G~L~k~~~---k~Wk~r~~vL--~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~ 139 (156)
|||.|+.+ ++|++|||+| ..+.|.||+++.+....|.|+|..+.+.... ....|.|. ++..+|+|.|.|+
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a~is~~~----~~~~I~id-sg~~i~hLKa~s~ 75 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLAVISANK----KSRRIDID-SGDEIWHLKAKSQ 75 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccceEEEecC----CCCEEEEE-cCCeEEEEEcCCH
Confidence 78887754 5999999999 8999999999888777999999888665542 23589997 8889999999999
Q ss_pred HHHHHHHHHHHHH
Q psy2209 140 QSYERWMKAMREA 152 (156)
Q Consensus 140 ~~~~~Wi~al~~a 152 (156)
++.+.|++||+.|
T Consensus 76 ~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 76 EDFQRWVSALQKA 88 (89)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999976
No 24
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.71 E-value=3.6e-16 Score=103.30 Aligned_cols=91 Identities=27% Similarity=0.449 Sum_probs=68.4
Q ss_pred EEEEEEecc------------CCCceEEEEEEeCCeEEEEccCCC--------------cccceEEEccCeEEEEccCCC
Q psy2209 63 HSGWLHKKS------------GRNWKRYWFVLKDQVMYKYKASED--------------IKALLSIPVLGYELEALNEQD 116 (156)
Q Consensus 63 ~~G~L~k~~------------~k~Wk~r~~vL~~~~L~~yk~~~~--------------~~~~~~i~L~~~~~~~~~~~~ 116 (156)
++|+|.+|. .+.|+..|+||+|+.|++|++... ..+...|+|.++.+....+..
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~dY~ 81 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASDYT 81 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETTBT
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCcccc
Confidence 689998862 148999999999999999998421 123456999999999988888
Q ss_pred CceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 117 NFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 117 ~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+++++|.|...++..|+|+|.|.++|.+||++|+.++
T Consensus 82 Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 82 KRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp TCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred cCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 8999999998888899999999999999999999775
No 25
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.67 E-value=1.1e-15 Score=97.24 Aligned_cols=82 Identities=28% Similarity=0.564 Sum_probs=65.0
Q ss_pred CCceEEEEEEeCCeEEEEccCCCccc--ceEEEccCeEEEEccCCCCceeEEEEEe---CCCccEEEEcCCHHHHHHHHH
Q psy2209 73 RNWKRYWFVLKDQVMYKYKASEDIKA--LLSIPVLGYELEALNEQDNFKYVFQLKH---QGQDPLVFGADNEQSYERWMK 147 (156)
Q Consensus 73 k~Wk~r~~vL~~~~L~~yk~~~~~~~--~~~i~L~~~~~~~~~~~~~~~~~f~i~~---~~~~~~~~~a~s~~~~~~Wi~ 147 (156)
|.|++|||+|+|+.|+||++..+..+ ...+.+.++.+.....-..+++.|.+.. .+.+.|+|.|+|++++..||+
T Consensus 18 K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wma 97 (106)
T cd01237 18 KGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMA 97 (106)
T ss_pred hhheeEEEEEeCCEEEEEccchhcCCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHHHHHHHHH
Confidence 58999999999999999998776544 5566667777766543334568888873 244789999999999999999
Q ss_pred HHHHHHh
Q psy2209 148 AMREATT 154 (156)
Q Consensus 148 al~~a~~ 154 (156)
|++.|+.
T Consensus 98 a~rlas~ 104 (106)
T cd01237 98 ACRLASK 104 (106)
T ss_pred HHHHhhC
Confidence 9999874
No 26
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.64 E-value=5.3e-15 Score=91.86 Aligned_cols=92 Identities=23% Similarity=0.409 Sum_probs=76.9
Q ss_pred cEEEEEEeccC----CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCC-CCceeEEEEEeCCCc------
Q psy2209 62 QHSGWLHKKSG----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQ-DNFKYVFQLKHQGQD------ 130 (156)
Q Consensus 62 ~~~G~L~k~~~----k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~-~~~~~~f~i~~~~~~------ 130 (156)
+..|||....- ++-|.|||||++.+|+||+++.+.++++.|+|.+..+..+++. ..++++|.|..++++
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvykd~ 81 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNVYKDY 81 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEecceeeeecccccccccceeeccccEEEeecccccCCCcEEEEEcCcccccccch
Confidence 56899988653 3679999999999999999999999999999999988876542 457799999866544
Q ss_pred -cEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 131 -PLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 131 -~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.+-++|++++++..|.+.+-+|.
T Consensus 82 k~lel~~~~~e~vdswkasflrag 105 (110)
T cd01256 82 KQLELGCETLEEVDSWKASFLRAG 105 (110)
T ss_pred heeeecCCCHHHHHHHHHHHHhcc
Confidence 45599999999999999886653
No 27
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.62 E-value=9.1e-15 Score=96.84 Aligned_cols=78 Identities=13% Similarity=0.423 Sum_probs=64.8
Q ss_pred CceEEEEEEeCCeEEEEccCCCcccceEEEcc-CeEEEEccCC-----------CCceeEEEEEeCCCccEEEEcCCHHH
Q psy2209 74 NWKRYWFVLKDQVMYKYKASEDIKALLSIPVL-GYELEALNEQ-----------DNFKYVFQLKHQGQDPLVFGADNEQS 141 (156)
Q Consensus 74 ~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~-~~~~~~~~~~-----------~~~~~~f~i~~~~~~~~~~~a~s~~~ 141 (156)
.|++|||+|+++.|.||+++.+..+.+.|.+. +..+...... ....+.|.|. +..++|.|.|+|+.+
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~~~~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~-t~~R~~~l~a~s~~~ 110 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPSSAQILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKIT-NSNRSLKLKCKSSRK 110 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCCCCceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEE-cCCcEEEEEeCCHHH
Confidence 69999999999999999999988899999883 3344332221 2456899997 888999999999999
Q ss_pred HHHHHHHHHHH
Q psy2209 142 YERWMKAMREA 152 (156)
Q Consensus 142 ~~~Wi~al~~a 152 (156)
+.+|+++|+.|
T Consensus 111 ~~~Wi~~i~~a 121 (121)
T cd01254 111 LKQWMASIEDA 121 (121)
T ss_pred HHHHHHHHHhC
Confidence 99999999875
No 28
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.62 E-value=3.7e-14 Score=89.31 Aligned_cols=92 Identities=30% Similarity=0.584 Sum_probs=77.4
Q ss_pred cEEEEEEeccC---CCceEEEEEEeCCeEEEEccCCC---cccceEEEccCeEEEEccCCC--CceeEEEEEeCCCccEE
Q psy2209 62 QHSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASED---IKALLSIPVLGYELEALNEQD--NFKYVFQLKHQGQDPLV 133 (156)
Q Consensus 62 ~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~---~~~~~~i~L~~~~~~~~~~~~--~~~~~f~i~~~~~~~~~ 133 (156)
.++|||.++.. ..|+++||+|.++.|.+|+.... ..+.+.|+|.++.+....+.. ..+++|.|.......++
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~ 81 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSYL 81 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEecCCceEE
Confidence 58999999875 48999999999999999998765 456899999999776655442 35699999966655899
Q ss_pred EEcCCHHHHHHHHHHHHHHH
Q psy2209 134 FGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 134 ~~a~s~~~~~~Wi~al~~a~ 153 (156)
|+|+|.+++..|+.+|+.+.
T Consensus 82 f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 82 LQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999875
No 29
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.61 E-value=2.9e-14 Score=91.02 Aligned_cols=92 Identities=23% Similarity=0.377 Sum_probs=75.3
Q ss_pred cEEEEEEeccCC-CceEEEEEEeCCeEEEEccCCCc---ccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcC
Q psy2209 62 QHSGWLHKKSGR-NWKRYWFVLKDQVMYKYKASEDI---KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGAD 137 (156)
Q Consensus 62 ~~~G~L~k~~~k-~Wk~r~~vL~~~~L~~yk~~~~~---~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~ 137 (156)
+++|+|.|..++ .|.|+||.+.|..||+.+...+. ...+.|+|.+..+....+....+++|+|. +..+.|.++|.
T Consensus 3 ikEG~L~K~~~k~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~~~~~~~F~I~-~~~ks~~l~A~ 81 (99)
T cd01220 3 IRQGCLLKLSKKGLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHEWGVPHCFTIF-GGQCAITVAAS 81 (99)
T ss_pred eeEEEEEEEeCCCCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceEEeeccCCcCCceeEEEE-cCCeEEEEECC
Confidence 589999998765 67777888888777777654333 35899999999987766654567999998 77788999999
Q ss_pred CHHHHHHHHHHHHHHHh
Q psy2209 138 NEQSYERWMKAMREATT 154 (156)
Q Consensus 138 s~~~~~~Wi~al~~a~~ 154 (156)
|++|+.+|+.+|+.|..
T Consensus 82 s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 82 TRAEKEKWLADLSKAIA 98 (99)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 99999999999998863
No 30
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.59 E-value=6.6e-14 Score=89.93 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=73.4
Q ss_pred cEEEEEEeccC--CCceEEEEEEeCCeEEEEccCC-----CcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEE
Q psy2209 62 QHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASE-----DIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVF 134 (156)
Q Consensus 62 ~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~-----~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 134 (156)
+++|||.|.++ +.|+.|||.|-++.|.|++... .....+.|+|.+..+... +....++.|.|. ...++|++
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~-~~~~~~~~F~I~-~~~rsf~l 80 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEG-DNLERPHSFLVS-GKQRCLEL 80 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeC-CCCCcCceEEEe-cCCcEEEE
Confidence 58999999886 4899999999888999998532 123367899999887654 234467999998 56689999
Q ss_pred EcCCHHHHHHHHHHHHHHH
Q psy2209 135 GADNEQSYERWMKAMREAT 153 (156)
Q Consensus 135 ~a~s~~~~~~Wi~al~~a~ 153 (156)
+|+|++++.+||++|+.|.
T Consensus 81 ~A~s~eEk~~W~~ai~~~i 99 (101)
T cd01219 81 QARTQKEKNDWVQAIFSII 99 (101)
T ss_pred EcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999885
No 31
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.57 E-value=1.6e-13 Score=89.65 Aligned_cols=89 Identities=21% Similarity=0.369 Sum_probs=54.2
Q ss_pred EEEEEEeccC---CCceEEEEEEe-CCeEEEEccCCCc-------------ccceEEEc----cCeEEEE--ccCCCCce
Q psy2209 63 HSGWLHKKSG---RNWKRYWFVLK-DQVMYKYKASEDI-------------KALLSIPV----LGYELEA--LNEQDNFK 119 (156)
Q Consensus 63 ~~G~L~k~~~---k~Wk~r~~vL~-~~~L~~yk~~~~~-------------~~~~~i~L----~~~~~~~--~~~~~~~~ 119 (156)
++|||+|++. +.|++|||+|. ++.|.||+.+.+. ...+.+.. ....... ........
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 5899999875 58999999999 9999999993222 11222221 1111111 01111123
Q ss_pred eEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 120 YVFQLKHQGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 120 ~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
..|.|. ++.++|+|.|++.+|+..|+.||++|
T Consensus 81 ~~~~i~-T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIF-TPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE--SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEE-CCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 678886 77889999999999999999999876
No 32
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.56 E-value=6e-14 Score=87.49 Aligned_cols=90 Identities=32% Similarity=0.644 Sum_probs=75.9
Q ss_pred EEEEEEeccC---CCceEEEEEEeCCeEEEEccCCC---cccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 63 HSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASED---IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 63 ~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~---~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
+.|||.++.. ..|+++||+|.++.|.+|+...+ ..+.+.|+|.+..+....+....+++|.|....++.++|+|
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~ 80 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQA 80 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEEe
Confidence 3689988765 57999999999999999998766 56799999999777776555445799999965558999999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMREA 152 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a 152 (156)
+|.+++..|+.+|+.+
T Consensus 81 ~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 81 ESEEEREEWIEALQSA 96 (96)
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9999999999999864
No 33
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.55 E-value=1.7e-14 Score=90.37 Aligned_cols=93 Identities=27% Similarity=0.489 Sum_probs=74.3
Q ss_pred cEEEEEEeccC---CCceEEEEEEeCCeEEEEc----cCCCcccceEEEccCeEEEEccCCC----------CceeEEEE
Q psy2209 62 QHSGWLHKKSG---RNWKRYWFVLKDQVMYKYK----ASEDIKALLSIPVLGYELEALNEQD----------NFKYVFQL 124 (156)
Q Consensus 62 ~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk----~~~~~~~~~~i~L~~~~~~~~~~~~----------~~~~~f~i 124 (156)
.++|||.+.|+ |.|++|||+|.+-.-|-|. .++...|...+.|.|+++...+..+ +..+.|..
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~ekks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~a 82 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYREKKAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNA 82 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhhhcCCchhheeecceEEeccCCCCCCcccccccccchhhhhe
Confidence 58999999998 5999999999965444332 3355678999999999998865444 34478888
Q ss_pred EeCCCccEEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 125 KHQGQDPLVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 125 ~~~~~~~~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
. ..+....|+++++.++..||+||.+|+.-
T Consensus 83 v-kegd~~~fa~~de~~r~lwvqa~yratgq 112 (117)
T cd01234 83 V-KEGDELKFATDDENERHLWVQAMYRATGQ 112 (117)
T ss_pred e-ccCcEEEEeccchHHHHHHHHHHHHHcCc
Confidence 7 56667999999999999999999999863
No 34
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.49 E-value=9.7e-13 Score=82.50 Aligned_cols=89 Identities=28% Similarity=0.535 Sum_probs=72.7
Q ss_pred EEEEEeccC------CCceEEEEEEeCCeEEEEccCCCcccc-eEEEccCeEEEEccCCCCceeEEEEEeCC--CccEEE
Q psy2209 64 SGWLHKKSG------RNWKRYWFVLKDQVMYKYKASEDIKAL-LSIPVLGYELEALNEQDNFKYVFQLKHQG--QDPLVF 134 (156)
Q Consensus 64 ~G~L~k~~~------k~Wk~r~~vL~~~~L~~yk~~~~~~~~-~~i~L~~~~~~~~~~~~~~~~~f~i~~~~--~~~~~~ 134 (156)
+|||.+++. +.|+++||+|.++.|++|+.+.+.... +.+++.+..+....+..+.+++|.|.... .+.++|
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~~~~ 81 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDRGRRVFVF 81 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccceEEEECCCCCCCCceEEEECCCCCcEEEEE
Confidence 588887763 479999999999999999998776655 68899888855554433456899999654 789999
Q ss_pred EcCCHHHHHHHHHHHHHH
Q psy2209 135 GADNEQSYERWMKAMREA 152 (156)
Q Consensus 135 ~a~s~~~~~~Wi~al~~a 152 (156)
+|+|.+++..|+.+|+.|
T Consensus 82 ~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 82 QADSEEEAQEWVEALQQA 99 (99)
T ss_pred EcCCHHHHHHHHHHHhcC
Confidence 999999999999999864
No 35
>KOG1090|consensus
Probab=99.20 E-value=8.7e-12 Score=104.04 Aligned_cols=94 Identities=26% Similarity=0.372 Sum_probs=79.7
Q ss_pred CCCcEEEEEEeccC--CCceEEEEEEe--CCeEEEEccCCCcccceEEEccCeEEEE--ccCCCCceeEEEEEeCCCccE
Q psy2209 59 SGSQHSGWLHKKSG--RNWKRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEA--LNEQDNFKYVFQLKHQGQDPL 132 (156)
Q Consensus 59 ~~~~~~G~L~k~~~--k~Wk~r~~vL~--~~~L~~yk~~~~~~~~~~i~L~~~~~~~--~~~~~~~~~~f~i~~~~~~~~ 132 (156)
.+...+|||+|+|. |.|+.|||||. ..+|+||.+-.+.+++|.|+|.....+. .++..+.+..|.+. +..++|
T Consensus 1632 eNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaevesv~~~~~k~vdekgffdlk-tt~rvy 1710 (1732)
T KOG1090|consen 1632 ENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEVESVALIGPKTVDEKGFFDLK-TTNRVY 1710 (1732)
T ss_pred cccCcccchhhcchhhcccccceeEecCCccceeeecccccccccchhhhhhhhhhcccCccccCccceeeee-hhhHHH
Confidence 44567999999997 69999999995 6899999999999999999997665543 33445567899997 888999
Q ss_pred EEEcCCHHHHHHHHHHHHHHH
Q psy2209 133 VFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 133 ~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.|+|.+...+++|++.|+.+.
T Consensus 1711 nf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1711 NFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred HHHhccchHHHHHHHHHHHhh
Confidence 999999999999999998764
No 36
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.16 E-value=1.5e-09 Score=69.69 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=74.3
Q ss_pred cEEEEEEeccCCCceEEEEEEeCCeEEEEccC---CCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCC
Q psy2209 62 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKAS---EDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADN 138 (156)
Q Consensus 62 ~~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~---~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s 138 (156)
+++|-|.|..++.-+.|+|.|=.+.|.|-+-- +.-...+.++|.+..+....+....++.|+|. +..+++.++|+|
T Consensus 5 i~eG~L~K~~rk~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~I~-~~~kSf~v~A~s 83 (104)
T cd01218 5 VGEGVLTKMCRKKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQVESIEDDGIERNGWIIK-TPTKSFAVYAAT 83 (104)
T ss_pred EecCcEEEeecCCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceEEEecCCcccccceEEEe-cCCeEEEEEcCC
Confidence 47899999888888888999988888885421 11233678999999888776655567999998 677899999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy2209 139 EQSYERWMKAMREATT 154 (156)
Q Consensus 139 ~~~~~~Wi~al~~a~~ 154 (156)
+++..+|+++|..|..
T Consensus 84 ~~eK~eWl~~i~~ai~ 99 (104)
T cd01218 84 ETEKREWMLHINKCVT 99 (104)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998863
No 37
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.15 E-value=2.6e-10 Score=72.96 Aligned_cols=90 Identities=24% Similarity=0.402 Sum_probs=62.5
Q ss_pred EEEEEEecc--CCCceEEEEEEeCCeEEEEccCCCccc---ceEEEccCeEEEEccCCC-----CceeEEEEEeCC----
Q psy2209 63 HSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKA---LLSIPVLGYELEALNEQD-----NFKYVFQLKHQG---- 128 (156)
Q Consensus 63 ~~G~L~k~~--~k~Wk~r~~vL~~~~L~~yk~~~~~~~---~~~i~L~~~~~~~~~~~~-----~~~~~f~i~~~~---- 128 (156)
.+|+|+.+. ++.|+++||+|+..-|||+-.....++ .....+.+..+-...... ..+++|.|.++.
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~ 81 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQSK 81 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccCcc
Confidence 479999874 479999999999999998865444443 223344555443322111 124889987542
Q ss_pred --CccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 129 --QDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 129 --~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
...-+|+|++++.+..|+.|||-+
T Consensus 82 ~s~~ik~lCaeDe~t~~~W~ta~Ri~ 107 (114)
T cd01259 82 GSQSIKYLCAEDLPTLDRWLTAIRIA 107 (114)
T ss_pred cchhheeeccCCHHHHHHHHHHHHHH
Confidence 234589999999999999999865
No 38
>KOG0932|consensus
Probab=99.14 E-value=1.3e-11 Score=97.86 Aligned_cols=103 Identities=21% Similarity=0.376 Sum_probs=78.7
Q ss_pred hhhhhccCC-CCcEEEEEEecc------------CCCceEEEEEEeCCeEEEEccCCCcc-------cceEEEccCeEEE
Q psy2209 51 LIEVTANDS-GSQHSGWLHKKS------------GRNWKRYWFVLKDQVMYKYKASEDIK-------ALLSIPVLGYELE 110 (156)
Q Consensus 51 ~~~~~~~~~-~~~~~G~L~k~~------------~k~Wk~r~~vL~~~~L~~yk~~~~~~-------~~~~i~L~~~~~~ 110 (156)
..+++.++. ...+.|+|.+|. +++||..|.+|+|..||+-+++-... ....|.+....+.
T Consensus 495 fldv~~dpsa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lknavsvHHALAt 574 (774)
T KOG0932|consen 495 FLDVPPDPSAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLKNAVSVHHALAT 574 (774)
T ss_pred cccCCCCCCchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhhhhhhhhhhhcC
Confidence 334444433 345899998862 24899999999999999988652211 1445555666666
Q ss_pred EccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 111 ALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 111 ~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
...+..+++++|.|...+.++|+|||.+.++|+.||..|+-++
T Consensus 575 ~AtdY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vA 617 (774)
T KOG0932|consen 575 PATDYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVA 617 (774)
T ss_pred CCcccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHH
Confidence 6778888899999999999999999999999999999998654
No 39
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.13 E-value=2.3e-09 Score=68.55 Aligned_cols=89 Identities=15% Similarity=0.358 Sum_probs=66.5
Q ss_pred EEEEEEecc------CCCceEEEEEEeCCeEEEEccCCCc---ccceEEEccCeEEE--E-------ccCCCCceeEEEE
Q psy2209 63 HSGWLHKKS------GRNWKRYWFVLKDQVMYKYKASEDI---KALLSIPVLGYELE--A-------LNEQDNFKYVFQL 124 (156)
Q Consensus 63 ~~G~L~k~~------~k~Wk~r~~vL~~~~L~~yk~~~~~---~~~~~i~L~~~~~~--~-------~~~~~~~~~~f~i 124 (156)
++|||.... +++|.+.|+||.+..|++|..+.+. .+...+++.. ... . ..+..+.|+.|+|
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~-~fhv~~V~asDVi~a~~kDiP~IF~I 80 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDK-LFHVRPVTQGDVYRADAKEIPKIFQI 80 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccc-eeeeecccHHHeeecCcccCCeEEEE
Confidence 689997532 2489999999999999999987654 3456666643 222 1 1234457899999
Q ss_pred EeCC-CccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 125 KHQG-QDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 125 ~~~~-~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
...+ .+..+|-|+++.|.+.|+.+|.+-
T Consensus 81 ~~~~~~~~lllLA~s~~ek~kWV~~L~~~ 109 (112)
T cd01242 81 LYANEARDLLLLAPQTDEQNKWVSRLVKK 109 (112)
T ss_pred EeCCccceEEEEeCCchHHHHHHHHHHHh
Confidence 8543 478999999999999999999764
No 40
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.10 E-value=1e-09 Score=70.50 Aligned_cols=89 Identities=16% Similarity=0.360 Sum_probs=71.4
Q ss_pred EEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCC-----CCceeEEEEEeCCCccEEEE
Q psy2209 63 HSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQ-----DNFKYVFQLKHQGQDPLVFG 135 (156)
Q Consensus 63 ~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~-----~~~~~~f~i~~~~~~~~~~~ 135 (156)
++|||-.... +.|||+|+.|+...+.+|.++...+....|+|.....+..... ...++||.|+ +...+||.+
T Consensus 2 kEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~-T~~~vY~VG 80 (117)
T cd01239 2 KEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIR-TTTNVYFVG 80 (117)
T ss_pred ccceEEEEecCccceeeeEEEecCCeEEEEEcCCCCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEE-ecCEEEEec
Confidence 6899987654 5899999999999999999999889999999988776653222 2356999999 677888886
Q ss_pred cC--------------------CHHHHHHHHHHHHHH
Q psy2209 136 AD--------------------NEQSYERWMKAMREA 152 (156)
Q Consensus 136 a~--------------------s~~~~~~Wi~al~~a 152 (156)
.+ ..+.++.|-.||++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 81 GEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred ccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 64 234668999999976
No 41
>KOG2059|consensus
Probab=99.07 E-value=3e-10 Score=92.10 Aligned_cols=93 Identities=22% Similarity=0.357 Sum_probs=76.5
Q ss_pred CcEEEEEEeccC-------CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEE--ccCCCCceeEEEEEeCCCcc
Q psy2209 61 SQHSGWLHKKSG-------RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEA--LNEQDNFKYVFQLKHQGQDP 131 (156)
Q Consensus 61 ~~~~G~L~k~~~-------k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~--~~~~~~~~~~f~i~~~~~~~ 131 (156)
+.+.|.|.++.. +++|+|||.|+...|.|.|+++.. +.+.|+|.+..++. .+...+.+++|+|.+++ ++
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~q-~~~~Ipl~nI~avEklee~sF~~knv~qVV~~d-rt 642 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGKQ-PIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTD-RT 642 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEeccceeEEecCCccC-cccceeHHHHHHHHHhhhhccCCCceEEEEecC-cc
Confidence 446677766532 378999999999999999997654 69999999888766 33445678999999777 79
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 132 LVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
.|++|.+..|.++|+++|++++.+
T Consensus 643 ly~Q~~n~vEandWldaL~kvs~~ 666 (800)
T KOG2059|consen 643 LYVQAKNCVEANDWLDALRKVSCC 666 (800)
T ss_pred eeEecCCchHHHHHHHHHHHHhcc
Confidence 999999999999999999988764
No 42
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.05 E-value=1e-08 Score=66.53 Aligned_cols=91 Identities=16% Similarity=0.346 Sum_probs=66.1
Q ss_pred cEEEEEEecc----CCCceEEEEEEeCCeEEEEccCCCcc------cceEEEccCe--EEEEc-------cCCCCceeEE
Q psy2209 62 QHSGWLHKKS----GRNWKRYWFVLKDQVMYKYKASEDIK------ALLSIPVLGY--ELEAL-------NEQDNFKYVF 122 (156)
Q Consensus 62 ~~~G~L~k~~----~k~Wk~r~~vL~~~~L~~yk~~~~~~------~~~~i~L~~~--~~~~~-------~~~~~~~~~f 122 (156)
.++|||.... +++|.++|+||.+..|++|..+.+.. +...+++.+. .+..+ .+..+.|+.|
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If 82 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIF 82 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCeEE
Confidence 4799997643 25999999999999999999766532 2355666322 22221 2334578999
Q ss_pred EEEe------CCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 123 QLKH------QGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 123 ~i~~------~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
+|.. ....+.+|-|+|+.|.+.|+.+|..-
T Consensus 83 ~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 83 RVTTSQISASSSKCSTLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred EEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHH
Confidence 9973 13467899999999999999999764
No 43
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.05 E-value=2.6e-09 Score=67.97 Aligned_cols=87 Identities=11% Similarity=0.342 Sum_probs=59.6
Q ss_pred EEEEEEeccCC----CceEEEEEEeCC--eEEE--EccC------CCcccceEEEccCeEEEEccCCCCceeEEEEEeCC
Q psy2209 63 HSGWLHKKSGR----NWKRYWFVLKDQ--VMYK--YKAS------EDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQG 128 (156)
Q Consensus 63 ~~G~L~k~~~k----~Wk~r~~vL~~~--~L~~--yk~~------~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~ 128 (156)
++|||+.+.++ .|.++||....+ .+-+ +... ........|.|..|.+...+.. ++.+||+|....
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~r~~~~~-dRRFCFei~~~~ 79 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSRRKTESI-DKRFCFDVEVEE 79 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccccccCCc-cceeeEeeeecC
Confidence 47999998753 799999998653 3211 2221 1112244566777777666443 477999997433
Q ss_pred -CccEEEEcCCHHHHHHHHHHHH
Q psy2209 129 -QDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 129 -~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
..++.|||+++.++..||.|+.
T Consensus 80 ~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 80 KPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred CCCeEEEEecCHHHHHHHHHhhc
Confidence 3479999999999999999974
No 44
>KOG0690|consensus
Probab=98.92 E-value=1.6e-09 Score=81.97 Aligned_cols=94 Identities=19% Similarity=0.420 Sum_probs=67.1
Q ss_pred CCCcEEEEEEeccC--CCceEEEEEE-eCCeEEEEccCCCcc-----cceEEEccCeEEEEccCCCCceeEEEEEeCCCc
Q psy2209 59 SGSQHSGWLHKKSG--RNWKRYWFVL-KDQVMYKYKASEDIK-----ALLSIPVLGYELEALNEQDNFKYVFQLKHQGQD 130 (156)
Q Consensus 59 ~~~~~~G~L~k~~~--k~Wk~r~~vL-~~~~L~~yk~~~~~~-----~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~ 130 (156)
..++++|||+|+|. +.|+.|||+| .+|.|.-|+...... |.....+.+|..... + ..+|+.|.|+.-...
T Consensus 13 ~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~~-e-rPrPntFiiRcLQWT 90 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMKT-E-RPRPNTFIIRCLQWT 90 (516)
T ss_pred hhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCCCcccccchhhhhhhhhhc-c-CCCCceEEEEeeeee
Confidence 34679999999998 6999999998 688999998754332 233334444444333 2 236789988743322
Q ss_pred ---cEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 131 ---PLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 131 ---~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
.-.|.+++.++++.|+.||+.++.
T Consensus 91 TVIERTF~ves~~eRq~W~~AIq~vsn 117 (516)
T KOG0690|consen 91 TVIERTFYVESAEERQEWIEAIQAVSN 117 (516)
T ss_pred eeeeeeeecCCHHHHHHHHHHHHHHhh
Confidence 236899999999999999998764
No 45
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.90 E-value=5.6e-08 Score=63.19 Aligned_cols=93 Identities=16% Similarity=0.264 Sum_probs=72.4
Q ss_pred cEEEEEEecc--CCCceEEEEEEeCCeEEEEccCCC-----------cccceEEEccCeEEEEccCCCCceeEEEEEeCC
Q psy2209 62 QHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASED-----------IKALLSIPVLGYELEALNEQDNFKYVFQLKHQG 128 (156)
Q Consensus 62 ~~~G~L~k~~--~k~Wk~r~~vL~~~~L~~yk~~~~-----------~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~ 128 (156)
+++|-|.+-. .+..+.|+|-|=++.|.|.+.... -.-++.+++....+...++....++.|.|.+..
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~~~~ 84 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEIILKD 84 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEEcCC
Confidence 5788888765 356788988888888888775332 112566888888887777766668999998545
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 129 QDPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 129 ~~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
.+.+.|+|.|+++..+||++|..+..
T Consensus 85 ~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 85 GNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 67899999999999999999988754
No 46
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.82 E-value=1e-07 Score=61.10 Aligned_cols=90 Identities=14% Similarity=0.201 Sum_probs=62.6
Q ss_pred CCCCcEEEEEEeccCCCceEEEEEEeCC-eEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 58 DSGSQHSGWLHKKSGRNWKRYWFVLKDQ-VMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 58 ~~~~~~~G~L~k~~~k~Wk~r~~vL~~~-~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
+..++++|++.|+.+=..++|+++|+++ .|+|+.. .....+|.|+++......... ...|.|. +.+++|+|..
T Consensus 10 ge~Il~~g~v~K~kgl~~kkR~liLTd~PrL~Yvdp-~~~~~KGeI~~~~~l~v~~k~----~~~F~I~-tp~RtY~l~d 83 (104)
T PF14593_consen 10 GELILKQGYVKKRKGLFAKKRQLILTDGPRLFYVDP-KKMVLKGEIPWSKELSVEVKS----FKTFFIH-TPKRTYYLED 83 (104)
T ss_dssp T--EEEEEEEEEEETTEEEEEEEEEETTTEEEEEET-TTTEEEEEE--STT-EEEECS----SSEEEEE-ETTEEEEEE-
T ss_pred CCeEEEEEEEEEeeceEEEEEEEEEccCCEEEEEEC-CCCeECcEEecCCceEEEEcc----CCEEEEE-CCCcEEEEEC
Confidence 4457899999998766789999999988 6666665 445568999998654444422 2489998 5578899887
Q ss_pred CCHHHHHHHHHHHHHHHh
Q psy2209 137 DNEQSYERWMKAMREATT 154 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a~~ 154 (156)
....+..|+++|+.+..
T Consensus 84 -~~~~A~~W~~~I~~~~~ 100 (104)
T PF14593_consen 84 -PEGNAQQWVEAIEEVKK 100 (104)
T ss_dssp -TTS-HHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHH
Confidence 45557889999988653
No 47
>KOG3640|consensus
Probab=98.78 E-value=1.2e-08 Score=85.18 Aligned_cols=96 Identities=17% Similarity=0.360 Sum_probs=74.3
Q ss_pred CCCcEEEEEEeccC----CCceEEEEEEeCCeEEEEccCCCc---ccceEEEccCeEEEEccCC----CCceeEEEEEe-
Q psy2209 59 SGSQHSGWLHKKSG----RNWKRYWFVLKDQVMYKYKASEDI---KALLSIPVLGYELEALNEQ----DNFKYVFQLKH- 126 (156)
Q Consensus 59 ~~~~~~G~L~k~~~----k~Wk~r~~vL~~~~L~~yk~~~~~---~~~~~i~L~~~~~~~~~~~----~~~~~~f~i~~- 126 (156)
..+.+.|||+.-.. ..|.||||+|.++.+.|++.+.|. .+.+.|+|..|+.....+. ..+++.|.|..
T Consensus 988 idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen 988 IDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred cceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence 34568899987542 479999999999999999977664 4689999999987765433 34678888871
Q ss_pred -----------CCCc-cEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 127 -----------QGQD-PLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 127 -----------~~~~-~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
-..+ ...|+|++.++++.|+.+|+.+..
T Consensus 1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~ 1107 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLK 1107 (1116)
T ss_pred cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHH
Confidence 1122 468999999999999999998753
No 48
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=98.68 E-value=2.2e-07 Score=76.61 Aligned_cols=95 Identities=15% Similarity=0.236 Sum_probs=70.3
Q ss_pred CCcEEEEEEeccC-----CCceEEEEEEeCCeEEEEccC--CCcccceEEEccCeEEEEccCCCC----ceeEEEEEeC-
Q psy2209 60 GSQHSGWLHKKSG-----RNWKRYWFVLKDQVMYKYKAS--EDIKALLSIPVLGYELEALNEQDN----FKYVFQLKHQ- 127 (156)
Q Consensus 60 ~~~~~G~L~k~~~-----k~Wk~r~~vL~~~~L~~yk~~--~~~~~~~~i~L~~~~~~~~~~~~~----~~~~f~i~~~- 127 (156)
.+.++|||+..+. ...++|||||.+..|.|||.. ....|.....+.+...+....... --|+|.|+..
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~ 82 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKK 82 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccccccceeeccCCCceEeecCceEEcCceEEEEEEecCC
Confidence 3569999999875 267999999999999999973 334566666666665555322111 1288888853
Q ss_pred -CCccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 128 -GQDPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 128 -~~~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
..+...|.|.|.+|+..|+.||+.|..
T Consensus 83 ~~~~~~~~~a~~~eea~~W~~a~~~a~~ 110 (719)
T PLN00188 83 EKYHRITMAAFNIQEALIWKEKIESVID 110 (719)
T ss_pred CccccEEEecCCHHHHHHHHHHHHHHHh
Confidence 445789999999999999999998763
No 49
>KOG3751|consensus
Probab=98.63 E-value=1.3e-07 Score=74.93 Aligned_cols=95 Identities=20% Similarity=0.302 Sum_probs=61.7
Q ss_pred CCCCcEEEEEEecc--CCCceEEEEEEeCCeEEEEccCCCcccce---EEEccCeEEEEcc--CCC---CceeEEEEEeC
Q psy2209 58 DSGSQHSGWLHKKS--GRNWKRYWFVLKDQVMYKYKASEDIKALL---SIPVLGYELEALN--EQD---NFKYVFQLKHQ 127 (156)
Q Consensus 58 ~~~~~~~G~L~k~~--~k~Wk~r~~vL~~~~L~~yk~~~~~~~~~---~i~L~~~~~~~~~--~~~---~~~~~f~i~~~ 127 (156)
...+.+.|||+.|+ +|.||+.||||+...|||+-......+.. ..++.+..+.... .+. ...++|.|..+
T Consensus 314 ~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~ 393 (622)
T KOG3751|consen 314 SSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPN 393 (622)
T ss_pred CCCccccceeeecccccccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeec
Confidence 34567899999875 47999999999999999986544433311 1223333332221 111 02367776643
Q ss_pred CC----c-cEEEEcCCHHHHHHHHHHHHHH
Q psy2209 128 GQ----D-PLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 128 ~~----~-~~~~~a~s~~~~~~Wi~al~~a 152 (156)
+. + .-+|+|+++..+..|+.|||-+
T Consensus 394 ~~~~~~r~lk~lCAEDe~t~~~WltAiRl~ 423 (622)
T KOG3751|consen 394 KLRNKRRFLKMLCAEDEQTRTCWLTAIRLL 423 (622)
T ss_pred cccCcccceeeeecccchhHHHHHHHHHHH
Confidence 22 2 3389999999999999999864
No 50
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.55 E-value=3.2e-07 Score=73.86 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=67.2
Q ss_pred CCCcEEEEEEeccC-CCceEEEEEEeCCeEEEEccCCC---cccceEEEc---cCeEEEEccCCCCceeEEEEEeCCCcc
Q psy2209 59 SGSQHSGWLHKKSG-RNWKRYWFVLKDQVMYKYKASED---IKALLSIPV---LGYELEALNEQDNFKYVFQLKHQGQDP 131 (156)
Q Consensus 59 ~~~~~~G~L~k~~~-k~Wk~r~~vL~~~~L~~yk~~~~---~~~~~~i~L---~~~~~~~~~~~~~~~~~f~i~~~~~~~ 131 (156)
......||+.+.+. ..|++|||.+.++.+........ ......+.+ .++..+.......++++|.|....++.
T Consensus 375 sDv~~~G~l~k~~~~~~wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~ 454 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDMRWKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQK 454 (478)
T ss_pred CCcccceEEeccCCCcchhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEecCCcE
Confidence 35678999999876 47999999998877777543221 111222223 232222111233467999998777788
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 132 LVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
++|.+++++++.+||.+|+.|..+
T Consensus 455 ~~~~~~~~~~~~~W~~~~~~~~~~ 478 (478)
T PTZ00267 455 IIAYAKTAEDRDQWISKFQRACGM 478 (478)
T ss_pred EEEecCChHHHHHHHHHHHHHhCC
Confidence 999999999999999999998753
No 51
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.53 E-value=7.7e-06 Score=52.66 Aligned_cols=90 Identities=16% Similarity=0.214 Sum_probs=68.6
Q ss_pred cEEEEEEeccC-CCc-eEEEEEEeCCeEEEEccCCCcc----cceEEEccCeEEEEccCCCCc------eeEEEEEeCC-
Q psy2209 62 QHSGWLHKKSG-RNW-KRYWFVLKDQVMYKYKASEDIK----ALLSIPVLGYELEALNEQDNF------KYVFQLKHQG- 128 (156)
Q Consensus 62 ~~~G~L~k~~~-k~W-k~r~~vL~~~~L~~yk~~~~~~----~~~~i~L~~~~~~~~~~~~~~------~~~f~i~~~~- 128 (156)
+++|-|.+.+. +.| +.|++-|=++.|.|.|...-.. -++.|++..+.+...++.... .+.|.|.+..
T Consensus 3 i~~Gel~~~s~~~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~ 82 (109)
T cd01224 3 FLQGEATRQKQNKGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSEST 82 (109)
T ss_pred eEeeeEEEEecccCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCC
Confidence 57888887664 344 5778888888898888532222 288999999998887665332 5899998654
Q ss_pred CccEEEEcCCHHHHHHHHHHHHH
Q psy2209 129 QDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 129 ~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
+..|.|+|.|+++...|++||..
T Consensus 83 ~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 83 DEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred CeEEEEEECCHHHHHHHHHHHHH
Confidence 56789999999999999999964
No 52
>KOG0521|consensus
Probab=98.52 E-value=5.7e-08 Score=81.77 Aligned_cols=92 Identities=21% Similarity=0.478 Sum_probs=76.3
Q ss_pred CcEEEEEEeccC---CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcC
Q psy2209 61 SQHSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGAD 137 (156)
Q Consensus 61 ~~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~ 137 (156)
....|+|+++.. +.|.++||-..++.+.|+..-.+.......+|..+.+...++...+.+||+|. +..++|.|||+
T Consensus 274 ~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~~~~~dL~~csvk~~~~~~drr~CF~ii-S~tks~~lQAe 352 (785)
T KOG0521|consen 274 YRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAENVLIEDLRTCSVKPDAEQRDRRFCFEII-SPTKSYLLQAE 352 (785)
T ss_pred hhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccccccccchhccccCCcccccceeeEEEe-cCCcceEEecC
Confidence 346778877754 58999999999999999887665554777788888888877765688999998 58889999999
Q ss_pred CHHHHHHHHHHHHHHH
Q psy2209 138 NEQSYERWMKAMREAT 153 (156)
Q Consensus 138 s~~~~~~Wi~al~~a~ 153 (156)
++.+...||.+|+...
T Consensus 353 s~~d~~~Wi~~i~nsi 368 (785)
T KOG0521|consen 353 SEKDCQDWISALQNSI 368 (785)
T ss_pred chhHHHHHHHHHHHHH
Confidence 9999999999998754
No 53
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.50 E-value=1e-06 Score=56.71 Aligned_cols=88 Identities=11% Similarity=0.339 Sum_probs=61.9
Q ss_pred EEEEEecc---C---CCceEEEEEEeCCeEEEEccCCCc-----ccceEEEcc--CeE-EEEccCCC---CceeEEEEEe
Q psy2209 64 SGWLHKKS---G---RNWKRYWFVLKDQVMYKYKASEDI-----KALLSIPVL--GYE-LEALNEQD---NFKYVFQLKH 126 (156)
Q Consensus 64 ~G~L~k~~---~---k~Wk~r~~vL~~~~L~~yk~~~~~-----~~~~~i~L~--~~~-~~~~~~~~---~~~~~f~i~~ 126 (156)
-|||..+- + +.|+.+|++|++..|++|+..--. .|....+|- -.. +...+... +++++|.+..
T Consensus 2 mGW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F~irt 81 (108)
T cd01258 2 IGWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCFLIRT 81 (108)
T ss_pred ceecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEEEEEc
Confidence 47887652 2 589999999999999999976442 233333332 111 11122222 4679999996
Q ss_pred CCC-ccEEEEcCCHHHHHHHHHHHHH
Q psy2209 127 QGQ-DPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 127 ~~~-~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
... ..++|..++..|+..|..+|..
T Consensus 82 g~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 82 GTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CCceeeEEEEecCHHHHHHHHHHHhc
Confidence 666 7899999999999999999964
No 54
>KOG3543|consensus
Probab=98.46 E-value=4.3e-08 Score=79.34 Aligned_cols=99 Identities=25% Similarity=0.450 Sum_probs=76.8
Q ss_pred ccCCCCcEEEEEEeccC---CCceEEEEEEeCCeEEEEc----cCCCcccceEEEccCeEEEEccCCCC---ceeEEEEE
Q psy2209 56 ANDSGSQHSGWLHKKSG---RNWKRYWFVLKDQVMYKYK----ASEDIKALLSIPVLGYELEALNEQDN---FKYVFQLK 125 (156)
Q Consensus 56 ~~~~~~~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk----~~~~~~~~~~i~L~~~~~~~~~~~~~---~~~~f~i~ 125 (156)
..+++..++|||+.-|. |.|++|||||..-.-|-|. .++...|...|.|.|+++...++.++ .++.|...
T Consensus 459 dkp~nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekkaepqel~qldgytvdytdp~pglqgg~~ffnav 538 (1218)
T KOG3543|consen 459 DKPPNMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAV 538 (1218)
T ss_pred cCCCccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcccChHHHhhccCeeeccCCCCCccccchHHHHHh
Confidence 45667779999999886 5899999999764444332 22556678899999999988765543 34667766
Q ss_pred eCCCccEEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 126 HQGQDPLVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 126 ~~~~~~~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
..+.+..|+.+++.++.-|++|+.+|+.-
T Consensus 539 -kegdtvifasddeqdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 539 -KEGDTVIFASDDEQDRHLWVQAMYRATGQ 567 (1218)
T ss_pred -ccCceEEeccCchhhhhHHHHHHHHhhCC
Confidence 56677999999999999999999999864
No 55
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.42 E-value=3.9e-06 Score=53.87 Aligned_cols=80 Identities=18% Similarity=0.317 Sum_probs=64.9
Q ss_pred CceEEEEEEeCCeEEEEccCCCc---ccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHH
Q psy2209 74 NWKRYWFVLKDQVMYKYKASEDI---KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 74 ~Wk~r~~vL~~~~L~~yk~~~~~---~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
.=..||++|=+..|.+....... .-.|.++|.+..+...++....++.|.|..+.-....+.|.+++|+.+|+..|+
T Consensus 27 e~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~ 106 (111)
T cd01225 27 EKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLEDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELLN 106 (111)
T ss_pred ccceeEEEEcCceEEEEEcCCCccceEEeeeecccccEEechHhccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHHH
Confidence 45678889988888887653322 228999999999988777777889999997776789999999999999999998
Q ss_pred HHH
Q psy2209 151 EAT 153 (156)
Q Consensus 151 ~a~ 153 (156)
+-+
T Consensus 107 ~~~ 109 (111)
T cd01225 107 ANN 109 (111)
T ss_pred hhc
Confidence 643
No 56
>KOG1117|consensus
Probab=98.34 E-value=2.7e-06 Score=71.10 Aligned_cols=92 Identities=16% Similarity=0.344 Sum_probs=75.0
Q ss_pred CCcEEEEEEeccC------------CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEc--cCCC---CceeEE
Q psy2209 60 GSQHSGWLHKKSG------------RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEAL--NEQD---NFKYVF 122 (156)
Q Consensus 60 ~~~~~G~L~k~~~------------k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~--~~~~---~~~~~f 122 (156)
...++|+|++... ....++||||-|+.|+||.++....|.+.|.+........ ++.. +-.|.|
T Consensus 491 s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~f 570 (1186)
T KOG1117|consen 491 STFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEKSTTPNGLININEIVCLAVHPPDTYPNTGFIFIF 570 (1186)
T ss_pred cccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcCCCCCCceeeccceEEEeecCCCCCCCcCceeEE
Confidence 3557899998531 2578999999999999999999999999999976655443 2222 234899
Q ss_pred EEEeCCCccEEEEcCCHHHHHHHHHHHHH
Q psy2209 123 QLKHQGQDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 123 ~i~~~~~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
.+..++++.|+|.+++.+++..|..+|-+
T Consensus 571 E~~l~~er~~~fgle~ad~l~~wt~aiaK 599 (1186)
T KOG1117|consen 571 EIYLPGERVFLFGLETADALRKWTEAIAK 599 (1186)
T ss_pred EEeecccceEEeecccHHHHHHHHHHHHH
Confidence 99999999999999999999999998854
No 57
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.32 E-value=7.2e-07 Score=56.80 Aligned_cols=94 Identities=22% Similarity=0.334 Sum_probs=67.2
Q ss_pred CCcEEEEEEeccC---CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEcc-CCCCceeEEEEEeCCCccEEEE
Q psy2209 60 GSQHSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALN-EQDNFKYVFQLKHQGQDPLVFG 135 (156)
Q Consensus 60 ~~~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~-~~~~~~~~f~i~~~~~~~~~~~ 135 (156)
+++..||+.|.|+ ..|++|||-|-++.|-+|....+.. ...|.+.....+..+ ..-+...|+.|...++..+++.
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~-~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~vlt 80 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANK-PELITMDQIEDVSVEFQQIKEENCILLKIRDEKKIVLT 80 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccC-CcEEEeehhhhcchhheeeccCceEEEEEcCCceEEEe
Confidence 4678999999987 4899999999999999975433322 333333332222211 1112347888887778889999
Q ss_pred cCCHHHHHHHHHHHHHHHh
Q psy2209 136 ADNEQSYERWMKAMREATT 154 (156)
Q Consensus 136 a~s~~~~~~Wi~al~~a~~ 154 (156)
+++.-+..+|...|+.|-.
T Consensus 81 ~~d~i~l~qW~~elr~a~r 99 (116)
T cd01240 81 NSDEIELKQWKKELRDAHR 99 (116)
T ss_pred cCCcHHHHHHHHHHHHHHH
Confidence 9999999999999987754
No 58
>KOG3531|consensus
Probab=98.27 E-value=1.7e-07 Score=77.78 Aligned_cols=91 Identities=33% Similarity=0.722 Sum_probs=75.2
Q ss_pred EEEEEEec--cCCCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCC--CceeEEEEEeCCCccEEEEcCC
Q psy2209 63 HSGWLHKK--SGRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQD--NFKYVFQLKHQGQDPLVFGADN 138 (156)
Q Consensus 63 ~~G~L~k~--~~k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~--~~~~~f~i~~~~~~~~~~~a~s 138 (156)
.+|||.++ ...+|.+-|.|+..-.|++||+-+|..+...++|.|+.+.+..+.+ .+.++|.|.. ...+|+|.|++
T Consensus 926 Lsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~~laslPlLgysvs~P~~~d~i~K~~vfkl~f-k~hvyffraes 1004 (1036)
T KOG3531|consen 926 LSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKF-KSHVYFFRAES 1004 (1036)
T ss_pred hhHHHHHHhhccccceeeeeeecceeeEeecccccccccccccccccccCCCCCCCCcchhheeeeeh-hhhHHHHhhhh
Confidence 45666543 2359999999999999999999999999999999999887743333 3559999984 55679999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy2209 139 EQSYERWMKAMREATT 154 (156)
Q Consensus 139 ~~~~~~Wi~al~~a~~ 154 (156)
.-....|+..|+.++.
T Consensus 1005 ~yt~~rw~evi~~a~~ 1020 (1036)
T KOG3531|consen 1005 YYTFERWMEVITDAPS 1020 (1036)
T ss_pred hhhhhhHHHHhhcCCc
Confidence 9999999999998764
No 59
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.26 E-value=1.9e-05 Score=48.86 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=63.9
Q ss_pred cEEEEEEeccCCCceEEEEEEeCCeEEEEccCCCcccceEEEccC-eEEEEccCCCCceeEEEEEeCCCccEEEEcCCHH
Q psy2209 62 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLG-YELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQ 140 (156)
Q Consensus 62 ~~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~-~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~ 140 (156)
.+.|.+.|+.+=.+++|-++|+++--.+|=++....-+|.|+++. ...+.. . ....|.|. +.+++|+|. +-..
T Consensus 2 l~~g~v~Kr~glf~kkR~LiLTd~PrL~yvdp~~~~~KgeIp~s~~~l~v~~-~---~~~~F~I~-Tp~rty~le-D~~~ 75 (89)
T cd01262 2 LKIGAVKKRKGLFAKKRQLILTNGPRLIYVDPVKKVVKGEIPWSDVELRVEV-K---NSSHFFVH-TPNKVYSFE-DPKG 75 (89)
T ss_pred ceeeeeeehhccccceeeEEEecCceEEEEcCCcCeEEeEecccccceEEEE-e---cCccEEEE-CCCceEEEE-CCCC
Confidence 467888887765789999999876666666666677799999987 333222 1 22588886 778889995 5568
Q ss_pred HHHHHHHHHHHHH
Q psy2209 141 SYERWMKAMREAT 153 (156)
Q Consensus 141 ~~~~Wi~al~~a~ 153 (156)
.+..|+.+|..+.
T Consensus 76 ~a~~W~~~I~~~~ 88 (89)
T cd01262 76 RASQWKKAIEDLQ 88 (89)
T ss_pred CHHHHHHHHHHHh
Confidence 8899999998764
No 60
>PLN02866 phospholipase D
Probab=98.15 E-value=3.9e-05 Score=66.01 Aligned_cols=92 Identities=20% Similarity=0.386 Sum_probs=68.9
Q ss_pred CcEEEEEEec------c-C---------------CCceEEEEEEeCCeEEEEccCCCcccceEEEccC---------eEE
Q psy2209 61 SQHSGWLHKK------S-G---------------RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLG---------YEL 109 (156)
Q Consensus 61 ~~~~G~L~k~------~-~---------------k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~---------~~~ 109 (156)
-.++||+.|+ + . ..|.++|++|+++.|.|.+++.+..+...+...- ..+
T Consensus 182 K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~~~~ 261 (1068)
T PLN02866 182 KLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPLDIIVFDVLPASNGNGEGQI 261 (1068)
T ss_pred CcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCceeEEEEEecccccccCCCcce
Confidence 4589999988 2 1 1599999999999999998888777766554431 111
Q ss_pred EEcc---CCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 110 EALN---EQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 110 ~~~~---~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.... +....++.|.|. ++.+.+.|.|.|...+..|+.+|+.+.
T Consensus 262 ~~~~~~k~~~~~~~~~~i~-~~~r~l~l~~~s~~~~~~w~~ai~~~~ 307 (1068)
T PLN02866 262 SLAKEIKERNPLRFGFKVT-CGNRSIRLRTKSSAKVKDWVAAINDAG 307 (1068)
T ss_pred eecccccccCCCcceEEEe-cCceEEEEEECCHHHHHHHHHHHHHHH
Confidence 1111 112235899997 888899999999999999999999886
No 61
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.12 E-value=0.00013 Score=46.27 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=59.7
Q ss_pred cEEEEEEeccCCCceEEEEEEeCCeEEEEccCCCccc-ceEEEccCeEEEEccCCCCceeEEEEEeCC--CccEEEEcCC
Q psy2209 62 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDIKA-LLSIPVLGYELEALNEQDNFKYVFQLKHQG--QDPLVFGADN 138 (156)
Q Consensus 62 ~~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~~~~~~-~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~--~~~~~~~a~s 138 (156)
+++|.+...+.+ +.|++-|=+..|.+.+..++.-. +..|.+.+..+....+. .++.|.|...+ .+.+.|+|.|
T Consensus 5 lleg~l~~~~~~--~eR~vFLFe~~ll~~K~~~~~y~~K~~i~~~~l~i~e~~~~--d~~~F~v~~~~~p~~~~~l~A~s 80 (97)
T cd01222 5 LLEGRFREHGGG--KPRLLFLFQTMLLIAKPRGDKYQFKAYIPCKNLMLVEHLPG--EPLCFRVIPFDDPKGALQLTARN 80 (97)
T ss_pred eeeceEEeecCC--CceEEEEecccEEEEEecCCeeEEEEEEEecceEEecCCCC--CCcEEEEEecCCCceEEEEEecC
Confidence 467777654432 34665565566666665444322 66777777777665443 26899997442 2589999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy2209 139 EQSYERWMKAMREAT 153 (156)
Q Consensus 139 ~~~~~~Wi~al~~a~ 153 (156)
.++.+.|+++|+.+.
T Consensus 81 ~e~K~~W~~~i~~~i 95 (97)
T cd01222 81 REEKRIWTQQLKRAM 95 (97)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 62
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.03 E-value=0.00011 Score=46.61 Aligned_cols=78 Identities=13% Similarity=0.267 Sum_probs=58.5
Q ss_pred eEE-EEEEeCCeEEEEcc-CCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 76 KRY-WFVLKDQVMYKYKA-SEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 76 k~r-~~vL~~~~L~~yk~-~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.+. .|.+.|..++-... .+.-.....++|.+..++-.++.+.-++.|.|. +..+++.++|++.++..+|++.|++|.
T Consensus 20 ~rv~~FLfND~Lvva~~~~~~ky~~~~~~~L~~i~V~ni~D~~~~kNafki~-t~~~s~i~qaes~~~K~eWl~~le~a~ 98 (100)
T cd01226 20 QRVMLFLLNDRLIVGNINAAGKYVMESTYSLNSVAVVNVKDRENAKKVLKLL-IFPESRIYQCESARIKTEWFEELEQAK 98 (100)
T ss_pred ceEEEEEeccEEEEEEecccceEEEEEEEehHHeEEEecCCCcCcCceEEEE-eCCccEEEEeCCHHHHHHHHHHHHHHh
Confidence 344 55555555554333 222334778899998888888877778999998 666779999999999999999999885
Q ss_pred h
Q psy2209 154 T 154 (156)
Q Consensus 154 ~ 154 (156)
.
T Consensus 99 ~ 99 (100)
T cd01226 99 R 99 (100)
T ss_pred c
Confidence 3
No 63
>KOG1739|consensus
Probab=98.03 E-value=6.7e-06 Score=64.90 Aligned_cols=86 Identities=19% Similarity=0.345 Sum_probs=66.9
Q ss_pred CcEEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCccc--ceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 61 SQHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDIKA--LLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 61 ~~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~~~--~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
...+|+|.+... ..|.-||++|..+.|.||+++.+... .|.|.|....+...+.. ...|.|. .+..++++.+
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l~ka~i~ahEfD---e~rfdIs-vn~nv~~lra 99 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDETEHGCRGSICLSKAVITAHEFD---ECRFDIS-VNDNVWYLRA 99 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhhhhhcccceeeEeccCCcccccch---hheeeeE-eccceeeehh
Confidence 346777766543 48999999999999999998765543 88888876655444322 2688898 5678899999
Q ss_pred CCHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMR 150 (156)
Q Consensus 137 ~s~~~~~~Wi~al~ 150 (156)
.+.+..+.|+++|.
T Consensus 100 ~~~~hr~~w~d~L~ 113 (611)
T KOG1739|consen 100 QDPDHRQQWIDALE 113 (611)
T ss_pred cCcHHHHHHHHHHH
Confidence 99999999999985
No 64
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.94 E-value=4e-05 Score=62.21 Aligned_cols=96 Identities=19% Similarity=0.333 Sum_probs=60.4
Q ss_pred CCcEEEEEEeccCC-CceEEEEEEeCCeEEEEccCCCccc-----------------ceEE--EccCeEEEE-cc---CC
Q psy2209 60 GSQHSGWLHKKSGR-NWKRYWFVLKDQVMYKYKASEDIKA-----------------LLSI--PVLGYELEA-LN---EQ 115 (156)
Q Consensus 60 ~~~~~G~L~k~~~k-~Wk~r~~vL~~~~L~~yk~~~~~~~-----------------~~~i--~L~~~~~~~-~~---~~ 115 (156)
...+.|.+.+.+.. .|++||+++.+...--+....+..+ ...| ++...+-+. ++ ..
T Consensus 372 ~~~~~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (496)
T PTZ00283 372 LTLYEGIVKKQSSDLSWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYTG 451 (496)
T ss_pred ceeeeeEEecccCCcccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhhC
Confidence 35678898887653 8999999987421111111001111 1111 222222211 21 11
Q ss_pred CCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 116 DNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 116 ~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
...+++|.+...+++.+.|+|.+.+++..||.+|+.+..+
T Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (496)
T PTZ00283 452 SNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLGI 491 (496)
T ss_pred CCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcCC
Confidence 2257999999899999999999999999999999998754
No 65
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.93 E-value=3.9e-05 Score=48.98 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=45.7
Q ss_pred EEEEeCCeEEEE-ccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHH
Q psy2209 79 WFVLKDQVMYKY-KASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 79 ~~vL~~~~L~~y-k~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
|..-+|.-|.+| +.++...|.|.|+|...+-... ...+.|.+. ..+....|+|.+..+++.||.+|.
T Consensus 43 wAsqTGKGLLF~~K~~dka~P~GiinLadase~~~----~g~~kF~f~-~~G~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 43 WASQTGKGLLFFSKAEDKASPSGIINLADASEPEK----DGSNKFHFK-IKGHKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred hhhccCceEEEEeccccccCCcceEehhhcccccc----CCCceEEEE-eCCceeeeecCCHHHhccHHHHhh
Confidence 444455445554 4445567899999976554332 133456665 356679999999999999999986
No 66
>PF15408 PH_7: Pleckstrin homology domain
Probab=97.86 E-value=6.2e-06 Score=50.27 Aligned_cols=88 Identities=13% Similarity=0.242 Sum_probs=60.5
Q ss_pred EEEEEeccCCCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEE-----ccCCC--C-ceeEEEEEeCCCccEEEE
Q psy2209 64 SGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEA-----LNEQD--N-FKYVFQLKHQGQDPLVFG 135 (156)
Q Consensus 64 ~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~-----~~~~~--~-~~~~f~i~~~~~~~~~~~ 135 (156)
+|||++.....-++||.+|++..+.+|.++.... .....|....+.. ....+ + ..+.|-.+.++++-.-+.
T Consensus 1 EGYLY~~E~~si~rRF~~L~~K~~~~~~~KGG~~-L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~F 79 (104)
T PF15408_consen 1 EGYLYRDEDSSIQRRFVMLRSKQFNMYEDKGGQY-LCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCF 79 (104)
T ss_pred CCeEEEeccchHHHHHHhhhhceeEEecccCCce-eeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcchhhhh
Confidence 5899998877889999999999999998865443 3333332221111 10001 1 125666666677777888
Q ss_pred cCCHHHHHHHHHHHHHH
Q psy2209 136 ADNEQSYERWMKAMREA 152 (156)
Q Consensus 136 a~s~~~~~~Wi~al~~a 152 (156)
|++.+.++.|++++++-
T Consensus 80 A~S~~~~~~Wi~~mN~~ 96 (104)
T PF15408_consen 80 ASSKKVCQSWIQVMNSP 96 (104)
T ss_pred hhHHHHHHHHHHHhcCh
Confidence 99999999999999753
No 67
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.80 E-value=0.00097 Score=44.19 Aligned_cols=89 Identities=16% Similarity=0.202 Sum_probs=59.8
Q ss_pred EEEEEEeccC-------CCceEEEEEEeC--CeEEEEccCCCcc-----cceEEEccCeEEEEccC-CC------CceeE
Q psy2209 63 HSGWLHKKSG-------RNWKRYWFVLKD--QVMYKYKASEDIK-----ALLSIPVLGYELEALNE-QD------NFKYV 121 (156)
Q Consensus 63 ~~G~L~k~~~-------k~Wk~r~~vL~~--~~L~~yk~~~~~~-----~~~~i~L~~~~~~~~~~-~~------~~~~~ 121 (156)
...||+|..+ +..++|||.|.. ..|++...+.... ..+.+.|.....+.... .+ ...++
T Consensus 11 ~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~~~~s 90 (123)
T PF12814_consen 11 IGEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPDHNKS 90 (123)
T ss_pred cccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccccceE
Confidence 3458888654 267899999975 6777766432111 13456666555544221 11 12367
Q ss_pred EEEEeCCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 122 FQLKHQGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 122 f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
|.|. ++++++-|.|.+.++.+-|+++|+.-
T Consensus 91 i~i~-t~~R~L~l~a~s~~~~~~W~~aL~~L 120 (123)
T PF12814_consen 91 IIIV-TPDRSLDLTAPSRERHEIWFNALRYL 120 (123)
T ss_pred EEEE-cCCeEEEEEeCCHHHHHHHHHHHHHH
Confidence 7777 78899999999999999999999854
No 68
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.77 E-value=0.00017 Score=45.46 Aligned_cols=79 Identities=22% Similarity=0.376 Sum_probs=52.5
Q ss_pred CCceEEEEEEe----CCeEEEEcc--CCCcccceEEEccCeEEE---EccCCCCceeEEEEEeCCCccEEEEcCCHHHHH
Q psy2209 73 RNWKRYWFVLK----DQVMYKYKA--SEDIKALLSIPVLGYELE---ALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYE 143 (156)
Q Consensus 73 k~Wk~r~~vL~----~~~L~~yk~--~~~~~~~~~i~L~~~~~~---~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~ 143 (156)
..|.+.-.+|. |..|.+|-. ++..+|+..+......-+ ...+-+++.+.|.|.-.+...|.|.|.+.++++
T Consensus 19 ~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~q~~ 98 (107)
T cd01231 19 ARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISEVRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQQLN 98 (107)
T ss_pred cccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhhhhhcccccccCcccEEEEEecCCceEEEEcCCHHHHH
Confidence 47887777774 345555554 566666555543221111 122333456899998777778999999999999
Q ss_pred HHHHHHHH
Q psy2209 144 RWMKAMRE 151 (156)
Q Consensus 144 ~Wi~al~~ 151 (156)
.|+..|+.
T Consensus 99 SWla~Ir~ 106 (107)
T cd01231 99 SWLAELRY 106 (107)
T ss_pred HHHHHHhc
Confidence 99999975
No 69
>KOG1451|consensus
Probab=97.71 E-value=0.00011 Score=59.64 Aligned_cols=92 Identities=14% Similarity=0.306 Sum_probs=63.0
Q ss_pred CCCcEEEEEEeccC----CCceEEEEEEeCCeEEEEccCCC------cccceEEEccCeEEEEccCCCCceeEEEEEeCC
Q psy2209 59 SGSQHSGWLHKKSG----RNWKRYWFVLKDQVMYKYKASED------IKALLSIPVLGYELEALNEQDNFKYVFQLKHQG 128 (156)
Q Consensus 59 ~~~~~~G~L~k~~~----k~Wk~r~~vL~~~~L~~yk~~~~------~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~ 128 (156)
....++|||+.+.+ +.|-++||+.....-.+-..+.+ ..+...+-|..|..... +.-++.|||.+...+
T Consensus 263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~RRkt-dSIdKRFCFDve~~e 341 (812)
T KOG1451|consen 263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSRRKT-DSIDKRFCFDVEVEE 341 (812)
T ss_pred CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhccCcc-cccccceeeeeeecc
Confidence 45679999999874 58999999986544333222222 22344555666655443 333466999998443
Q ss_pred -CccEEEEcCCHHHHHHHHHHHHH
Q psy2209 129 -QDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 129 -~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
..++.+||-++.++..||.|+.-
T Consensus 342 rpgviTmQALSE~drrlWmeAMDG 365 (812)
T KOG1451|consen 342 RPGVITMQALSEKDRRLWMEAMDG 365 (812)
T ss_pred cCCeeehHhhhhhHHHHHHHHhcC
Confidence 35889999999999999999853
No 70
>KOG0248|consensus
Probab=97.69 E-value=2.2e-05 Score=64.40 Aligned_cols=89 Identities=19% Similarity=0.352 Sum_probs=67.1
Q ss_pred CcEEEEEEeccC--CCceEEEEEEeCCeEEEEccCCC--cccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 61 SQHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASED--IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 61 ~~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~--~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
..++||+.+.+. +.|++||+|++.++..||+..++ ..+.+.+++........ ....+.|++. +....++|-+
T Consensus 249 ~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~~---~~~s~~fqli-~~t~~~~~~~ 324 (936)
T KOG0248|consen 249 MEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSVTKLEQ---QGAAYAFQLI-TSTDKMNFMT 324 (936)
T ss_pred hhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccccccceeec---cchhHHhhhh-hhceeEEEec
Confidence 347888877765 48999999999999999997665 35677777744333222 1234789987 6667799999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMREAT 153 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a~ 153 (156)
++..-..+|++.|..+.
T Consensus 325 ~s~~lt~dw~~iL~~~i 341 (936)
T KOG0248|consen 325 ESERTTHDWVTILSAAI 341 (936)
T ss_pred cChhhhhhhHHHHHHHH
Confidence 99999999999987654
No 71
>KOG1117|consensus
Probab=97.56 E-value=2.5e-05 Score=65.55 Aligned_cols=89 Identities=20% Similarity=0.303 Sum_probs=75.9
Q ss_pred CCcEEEEEEeccC---CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 60 GSQHSGWLHKKSG---RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 60 ~~~~~G~L~k~~~---k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
.+++.|||.|... ..+.+||..+.+..+.||.++++..+++.|++.....+... ....|++. ++.+++.|.+
T Consensus 86 p~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~py~k~~i~va~is~v~~~----gd~kfevi-tn~r~fvfr~ 160 (1186)
T KOG1117|consen 86 PVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKDPYSKGPIPVAAISAVRNF----GDNKFEVI-TNQRTFVFRQ 160 (1186)
T ss_pred chhhcchhhccCcCcccccCccceecCCCCccccCCCCCCCCCCceeeehhhhhhhc----cCceEEEE-ecceEEEEec
Confidence 3679999999754 37899999999999999999999999999999776665442 33689998 7889999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMREAT 153 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a~ 153 (156)
++..+...|+..++.+.
T Consensus 161 e~~~~r~~w~s~l~s~~ 177 (1186)
T KOG1117|consen 161 ESEGERFIWVSPLQSAL 177 (1186)
T ss_pred CCcccceeeechhhhcc
Confidence 99999999999998764
No 72
>KOG3723|consensus
Probab=97.55 E-value=2e-05 Score=63.60 Aligned_cols=95 Identities=18% Similarity=0.338 Sum_probs=67.0
Q ss_pred CCCCcEEEEEEeccC-----CCceEEEEEEeCCeEEEEccCCCcc-cceEEEccCeEEEE-ccC---CCCceeEEEEEeC
Q psy2209 58 DSGSQHSGWLHKKSG-----RNWKRYWFVLKDQVMYKYKASEDIK-ALLSIPVLGYELEA-LNE---QDNFKYVFQLKHQ 127 (156)
Q Consensus 58 ~~~~~~~G~L~k~~~-----k~Wk~r~~vL~~~~L~~yk~~~~~~-~~~~i~L~~~~~~~-~~~---~~~~~~~f~i~~~ 127 (156)
+..++.+|-|.-+.+ |.|+.|||.|.|..|.|.+...... ....|+|.....+. +.. ....+-.|.|. +
T Consensus 732 ~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~~~~IDl~~IRSVk~v~~kr~~rslpKAFEIF-T 810 (851)
T KOG3723|consen 732 DGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSDDCPIDLSKIRSVKAVAKKRRDRSLPKAFEIF-T 810 (851)
T ss_pred CCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCCCCCccHHHhhhHHHHHhhhhhcccchhhhee-e
Confidence 344577888875544 5899999999999999977543222 23557775544433 111 11235789998 6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 128 GQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 128 ~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.++++.+.|.++..+.+|++.|.-|.
T Consensus 811 AD~T~ILKaKDeKNAEEWlqCL~Iav 836 (851)
T KOG3723|consen 811 ADKTYILKAKDEKNAEEWLQCLNIAV 836 (851)
T ss_pred cCceEEeecccccCHHHHHHHHHHHH
Confidence 66779999999999999999998665
No 73
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.45 E-value=0.001 Score=41.61 Aligned_cols=83 Identities=12% Similarity=0.201 Sum_probs=57.2
Q ss_pred cEEEEEEeccCCCceEEEEEEeCCeEEEEccC---CC----cccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEE
Q psy2209 62 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKAS---ED----IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVF 134 (156)
Q Consensus 62 ~~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~---~~----~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 134 (156)
+.+|+|.+.-.+.=+.|-|-|=++.|.|-+-. .. -..+-.|+|.+..+... .|.+..+.+++|.|
T Consensus 4 v~eg~lvel~~~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~--------~~~~~~~~~KSf~~ 75 (96)
T cd01228 4 VKDSFLVELVEGSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSE--------PFRIHNKNGKSYTF 75 (96)
T ss_pred cccceeeeehhCCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheecch--------hhhccccCCceEEE
Confidence 46788888665555666666666666663321 11 11245778877666444 26665667899999
Q ss_pred EcCCHHHHHHHHHHHHHH
Q psy2209 135 GADNEQSYERWMKAMREA 152 (156)
Q Consensus 135 ~a~s~~~~~~Wi~al~~a 152 (156)
.|.|..|..+|+.+|++-
T Consensus 76 ~asS~~Er~eW~~hI~~~ 93 (96)
T cd01228 76 LLSSDYERSEWRESIQKL 93 (96)
T ss_pred EecCHHHHHHHHHHHHHH
Confidence 999999999999999764
No 74
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.42 E-value=0.0028 Score=41.95 Aligned_cols=76 Identities=18% Similarity=0.290 Sum_probs=44.1
Q ss_pred ceEEEEEEeCCeEEEEccCCCcc--cceEEEccCeEEEEccCCC----------CceeEEEEEe-----CCCccEEEEcC
Q psy2209 75 WKRYWFVLKDQVMYKYKASEDIK--ALLSIPVLGYELEALNEQD----------NFKYVFQLKH-----QGQDPLVFGAD 137 (156)
Q Consensus 75 Wk~r~~vL~~~~L~~yk~~~~~~--~~~~i~L~~~~~~~~~~~~----------~~~~~f~i~~-----~~~~~~~~~a~ 137 (156)
-+.+|+-|=.+.|.|-+.+.+.. -....+.....+....... ..++.|.|.. .....+.|+|+
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~ 106 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLSAD 106 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEECC
Confidence 34567777667677666433211 0111122333333221111 2468899852 23357899999
Q ss_pred CHHHHHHHHHHHH
Q psy2209 138 NEQSYERWMKAMR 150 (156)
Q Consensus 138 s~~~~~~Wi~al~ 150 (156)
|++|+..||.||.
T Consensus 107 S~sdr~rWi~Al~ 119 (125)
T cd01221 107 SQSDRERWLSALA 119 (125)
T ss_pred CHHHHHHHHHhcC
Confidence 9999999999983
No 75
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.30 E-value=0.0042 Score=40.49 Aligned_cols=91 Identities=23% Similarity=0.303 Sum_probs=58.2
Q ss_pred EEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCc------ccceEEEccCeEEEEcc--CCC----CceeEEEEEeCC
Q psy2209 63 HSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDI------KALLSIPVLGYELEALN--EQD----NFKYVFQLKHQG 128 (156)
Q Consensus 63 ~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~------~~~~~i~L~~~~~~~~~--~~~----~~~~~f~i~~~~ 128 (156)
.-|.|..+.- ..=+.||.-|=+..+.+.|...+. .-+..+.|..+.+...+ +.. ...+.|.|.+..
T Consensus 6 ~DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~~~ 85 (116)
T cd01223 6 LDGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAHKQ 85 (116)
T ss_pred cCCceEEeEeccCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEecC
Confidence 4455554432 223567766666666666644332 11555666665555432 222 245888888655
Q ss_pred C-ccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 129 Q-DPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 129 ~-~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+ ..+.|+|.|+++...||.+|..|.
T Consensus 86 ~~~~~~f~~Ktee~K~kWm~al~~a~ 111 (116)
T cd01223 86 GKTGFTFYFKTEHLRKKWLKALEMAM 111 (116)
T ss_pred CCccEEEEeCCHHHHHHHHHHHHHHH
Confidence 3 789999999999999999998875
No 76
>KOG4424|consensus
Probab=97.23 E-value=0.00056 Score=55.39 Aligned_cols=94 Identities=26% Similarity=0.400 Sum_probs=72.3
Q ss_pred CCCcEEEEEEec--cCCCceEEEEEE---eCCeEEEEccCCCcccceEEEccCeEEEEccC--CCCceeEEEEEeCCCcc
Q psy2209 59 SGSQHSGWLHKK--SGRNWKRYWFVL---KDQVMYKYKASEDIKALLSIPVLGYELEALNE--QDNFKYVFQLKHQGQDP 131 (156)
Q Consensus 59 ~~~~~~G~L~k~--~~k~Wk~r~~vL---~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~--~~~~~~~f~i~~~~~~~ 131 (156)
.+...+++|.+- .++.|..-|++. .+..++.|..+.|......|+|.|+.+...+. ..+..++|.+. .....
T Consensus 495 ~~~~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~-~s~~~ 573 (623)
T KOG4424|consen 495 KENVICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQDVRAQATIPLPGVEVTIPEFVRREDLFHVFKLV-QSHLS 573 (623)
T ss_pred CCceehhhHHHHhhcCccceeeeeeccCCCCccccccCCccccccccccccCccccCCCcccccchhcchhhhh-hhcce
Confidence 334556666553 356999999988 46888999999998889999999988864322 22244788887 55568
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q psy2209 132 LVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
++|.|++++-.+.|++.|..|+
T Consensus 574 ~~~~a~~~q~qq~wl~~l~~A~ 595 (623)
T KOG4424|consen 574 WHLAADDEQLQQRWLEVLLLAV 595 (623)
T ss_pred eeeccCCHHHHHHHHHHHHhhh
Confidence 9999999999999999998775
No 77
>PF15404 PH_4: Pleckstrin homology domain
Probab=97.23 E-value=0.0073 Score=42.72 Aligned_cols=30 Identities=27% Similarity=0.565 Sum_probs=26.5
Q ss_pred EEEEEEeccCC--CceEEEEEEeCCeEEEEcc
Q psy2209 63 HSGWLHKKSGR--NWKRYWFVLKDQVMYKYKA 92 (156)
Q Consensus 63 ~~G~L~k~~~k--~Wk~r~~vL~~~~L~~yk~ 92 (156)
++|+|+.|.++ .|++++++|.+|.|..|..
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 46999988864 8999999999999999985
No 78
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.01 E-value=0.018 Score=37.67 Aligned_cols=53 Identities=21% Similarity=0.343 Sum_probs=37.9
Q ss_pred ceEEEccCeEEEEccCCCCceeEEEEEeCC----CccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 99 LLSIPVLGYELEALNEQDNFKYVFQLKHQG----QDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 99 ~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~----~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+..|.+....+....+.+. ..|.|-..+ ..+|.++|.|.++.+.|+..|+++.
T Consensus 56 K~~ikls~l~l~e~v~gd~--~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il 112 (114)
T cd01232 56 KSKLQVSKMGLTEHVEGDP--CRFALWSGDPPISDNRIILKANSQETKQEWVKKIREIL 112 (114)
T ss_pred ecceeeeeeEeEEccCCCC--ceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 4666777766666554444 455554322 3689999999999999999999864
No 79
>KOG1738|consensus
Probab=96.99 E-value=0.00014 Score=59.29 Aligned_cols=63 Identities=19% Similarity=0.384 Sum_probs=50.6
Q ss_pred CcEEEEEEeccC-----CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEE
Q psy2209 61 SQHSGWLHKKSG-----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQ 123 (156)
Q Consensus 61 ~~~~G~L~k~~~-----k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~ 123 (156)
-..+|||++++. ..|++.||||.+..|+.|.+.....+.+.|.|.+.++....+-.+++..|.
T Consensus 562 G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~e~~i~l~~~~i~~a~e~~~~~~~~~ 629 (638)
T KOG1738|consen 562 GDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAAESVIKLPLFTISVAEEVLGKPELTG 629 (638)
T ss_pred chhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhchhheeeccchhhhhHHHhccCHhhhc
Confidence 347889988753 389999999999999999999999999999999888877655544444433
No 80
>KOG3549|consensus
Probab=96.69 E-value=0.0062 Score=46.86 Aligned_cols=97 Identities=19% Similarity=0.359 Sum_probs=66.5
Q ss_pred CCCcEEEEEEeccC-----CCceEEEEEEeCCeEEEEccCCCccc-----ceEEEcc--CeEEEE-ccCCCCceeEEEEE
Q psy2209 59 SGSQHSGWLHKKSG-----RNWKRYWFVLKDQVMYKYKASEDIKA-----LLSIPVL--GYELEA-LNEQDNFKYVFQLK 125 (156)
Q Consensus 59 ~~~~~~G~L~k~~~-----k~Wk~r~~vL~~~~L~~yk~~~~~~~-----~~~i~L~--~~~~~~-~~~~~~~~~~f~i~ 125 (156)
..+.+-||..-+-. ..++.+|..|+|..+|.|..+.-... .....+- -+.+.. ..-.+.+++||.|.
T Consensus 279 ~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~y~F~tPPv~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~~q 358 (505)
T KOG3549|consen 279 EQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEVYLFETPPVNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFLLQ 358 (505)
T ss_pred ceEEEeeeccccccCcccccccCceeEEecCcEEEEEcCCCcchhhhhhhhhhHHHHHHHHHHhccccccccccceEEEE
Confidence 34568899876532 35688999999999999987642211 1111110 000000 11123478999999
Q ss_pred eCCCccEEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 126 HQGQDPLVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 126 ~~~~~~~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
..++...||..+...++..|-.+.+.|+.+
T Consensus 359 s~~ge~~yfsVEl~seLa~wE~sfq~Atf~ 388 (505)
T KOG3549|consen 359 SSGGEPRYFSVELRSELARWENSFQAATFT 388 (505)
T ss_pred cCCCCceEEEEehhhHHHHHHHHHhhHHhH
Confidence 888899999999999999999999999865
No 81
>KOG4424|consensus
Probab=96.52 E-value=0.0069 Score=49.32 Aligned_cols=91 Identities=15% Similarity=0.275 Sum_probs=64.3
Q ss_pred CcEEEEEEeccCC--CceEEEEEEeCCeEEEEccCCC-----cccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEE
Q psy2209 61 SQHSGWLHKKSGR--NWKRYWFVLKDQVMYKYKASED-----IKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLV 133 (156)
Q Consensus 61 ~~~~G~L~k~~~k--~Wk~r~~vL~~~~L~~yk~~~~-----~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~ 133 (156)
.+++|-|.|...+ .-..||+.|=.+.+.|.+...- ......+.+.+..+... +....++.|.++ ...+..-
T Consensus 272 LiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~-~~~~~~~tF~~~-G~~r~ve 349 (623)
T KOG4424|consen 272 LIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQED-DNEELPHTFILT-GKKRGVE 349 (623)
T ss_pred HhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhccc-ccccCCceEEEe-cccceEE
Confidence 4589999987654 6788999987777776654321 11233444555444332 233357899998 5678899
Q ss_pred EEcCCHHHHHHHHHHHHHHH
Q psy2209 134 FGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 134 ~~a~s~~~~~~Wi~al~~a~ 153 (156)
|+|.++++..+|+++|+.+.
T Consensus 350 l~a~t~~ek~eWv~~I~~~I 369 (623)
T KOG4424|consen 350 LQARTEQEKKEWVQAIQDAI 369 (623)
T ss_pred eecCchhhHHHHHHHHHHHH
Confidence 99999999999999998765
No 82
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.52 E-value=0.04 Score=35.86 Aligned_cols=77 Identities=14% Similarity=0.175 Sum_probs=47.2
Q ss_pred CCc-eEEEEEEe--CCeEEEEccCCCcccceEEEccCeEEEEcc------------CC--CCceeEEEEEeCCC---ccE
Q psy2209 73 RNW-KRYWFVLK--DQVMYKYKASEDIKALLSIPVLGYELEALN------------EQ--DNFKYVFQLKHQGQ---DPL 132 (156)
Q Consensus 73 k~W-k~r~~vL~--~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~------------~~--~~~~~~f~i~~~~~---~~~ 132 (156)
+.+ +++.|.|. +..|+|... ... ....++|....-+... .. .....+|.|.+..+ +.+
T Consensus 18 ~~~~~~~~f~ld~~~~~l~W~~~-~~~-~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L 95 (115)
T cd01248 18 TSRERRRLFRLDEKGFFLYWKDE-GKK-EKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSL 95 (115)
T ss_pred CCceeeEEEEEcCCCcEEEEeCC-CCc-cccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEE
Confidence 344 46677774 455555543 221 3445666443322211 00 12237899886554 678
Q ss_pred EEEcCCHHHHHHHHHHHHH
Q psy2209 133 VFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 133 ~~~a~s~~~~~~Wi~al~~ 151 (156)
.|.|+|.++++.|+..|+.
T Consensus 96 ~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 96 DLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred EEEECCHHHHHHHHHHHhh
Confidence 9999999999999999864
No 83
>KOG4807|consensus
Probab=96.42 E-value=7.7e-06 Score=63.14 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=62.2
Q ss_pred CceEEEEEEeCCeEEEEccCCCcc---cceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHH
Q psy2209 74 NWKRYWFVLKDQVMYKYKASEDIK---ALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 74 ~Wk~r~~vL~~~~L~~yk~~~~~~---~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
.|++.|||+++..+.||.+..... ..+.|+|..|+-+.... ..+.|.|+|. +.+.+|.+.+.+.....+|+.|++
T Consensus 34 ~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a-~q~nY~~~i~-~~~~~~tL~~~~s~Ir~~~~~A~~ 111 (593)
T KOG4807|consen 34 QWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYA-VQRNYGFQIH-TKDAVYTLSAMTSGIRRNWIEALR 111 (593)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHH-HHhccceeec-ccchhhhhHHHHHHHHHHHHHHHH
Confidence 799999999999999999764432 37888887776543211 2356999996 888889999999999999999998
Q ss_pred HHH
Q psy2209 151 EAT 153 (156)
Q Consensus 151 ~a~ 153 (156)
+..
T Consensus 112 kT~ 114 (593)
T KOG4807|consen 112 KTV 114 (593)
T ss_pred hcc
Confidence 643
No 84
>KOG0705|consensus
Probab=96.33 E-value=0.0021 Score=52.34 Aligned_cols=32 Identities=16% Similarity=0.379 Sum_probs=29.4
Q ss_pred eEEEEEeCCCccEEEEcCCHHHHHHHHHHHHH
Q psy2209 120 YVFQLKHQGQDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 120 ~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
++|.|+..-+.+|.|.|.+.+|++.||+||..
T Consensus 446 e~F~IVs~tgqtWhFeAtt~EERdaWvQai~s 477 (749)
T KOG0705|consen 446 ECFEIVSNTGQTWHFEATTYEERDAWVQAIQS 477 (749)
T ss_pred ceEEEeccccchhhhhhcchhhHHHHHHHHHH
Confidence 49999988888999999999999999999974
No 85
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=96.27 E-value=0.081 Score=35.61 Aligned_cols=91 Identities=22% Similarity=0.350 Sum_probs=42.2
Q ss_pred cEEEEEEeccCC--CceEEEEEEeCCeEEEEccCCCc------ccceEEEccCeEEEEc---------------------
Q psy2209 62 QHSGWLHKKSGR--NWKRYWFVLKDQVMYKYKASEDI------KALLSIPVLGYELEAL--------------------- 112 (156)
Q Consensus 62 ~~~G~L~k~~~k--~Wk~r~~vL~~~~L~~yk~~~~~------~~~~~i~L~~~~~~~~--------------------- 112 (156)
++.|-|.+++.. .|..-.+.|=|..|..-|..... .-...|+|.-..+...
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~~~~~ 81 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSLISSS 81 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTTS---------S------
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCCcccCcccccccCccCCc
Confidence 367788777753 57777777777777665543211 1144444433332210
Q ss_pred -----------cCCCCceeEEEEEeCCCc--cEEEEcCCHHHHHHHHHHHHHH
Q psy2209 113 -----------NEQDNFKYVFQLKHQGQD--PLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 113 -----------~~~~~~~~~f~i~~~~~~--~~~~~a~s~~~~~~Wi~al~~a 152 (156)
.......|.|.+.+-+.+ .|.|+|+|..++++|++.|.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 82 SSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp -SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred cCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 011123477888766544 4699999999999999999875
No 86
>PF15411 PH_10: Pleckstrin homology domain
Probab=96.25 E-value=0.17 Score=33.20 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=59.5
Q ss_pred cEEEEEEeccCCCceEEEEEEeCCeEEEEccCCCc---------------c----cceEEEccCeEEEEccCCCCceeEE
Q psy2209 62 QHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDI---------------K----ALLSIPVLGYELEALNEQDNFKYVF 122 (156)
Q Consensus 62 ~~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~~~~---------------~----~~~~i~L~~~~~~~~~~~~~~~~~f 122 (156)
...|-+.......|+.+.+-|=...|.+++..... . .+|.|.+.+.+-+..... ...+.+
T Consensus 8 ll~g~~~V~k~~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~-~g~~~L 86 (116)
T PF15411_consen 8 LLHGTLTVGKDDSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSK-PGSYSL 86 (116)
T ss_pred EEccEEEEEeCCcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCC-CCceEE
Confidence 35566666555679999888877777777633111 1 167777766655444332 345788
Q ss_pred EEEe---CCCccEEEEcCCHHHHHHHHHHH
Q psy2209 123 QLKH---QGQDPLVFGADNEQSYERWMKAM 149 (156)
Q Consensus 123 ~i~~---~~~~~~~~~a~s~~~~~~Wi~al 149 (156)
+|.- ++...|.|...|++++..|-.+|
T Consensus 87 ~i~w~~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 87 QISWKGDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred EEEEcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence 8874 35568999999999999998875
No 87
>KOG4236|consensus
Probab=96.19 E-value=0.01 Score=48.59 Aligned_cols=94 Identities=16% Similarity=0.304 Sum_probs=66.5
Q ss_pred CCCcEEEEEEeccCC--CceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccC------CCCceeEEEEEeCCCc
Q psy2209 59 SGSQHSGWLHKKSGR--NWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNE------QDNFKYVFQLKHQGQD 130 (156)
Q Consensus 59 ~~~~~~G~L~k~~~k--~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~------~~~~~~~f~i~~~~~~ 130 (156)
....++||+.....+ .-++.|-.|+...+..|.++....-...|+|.....+.... ....++||.|. +..
T Consensus 411 st~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~-T~~- 488 (888)
T KOG4236|consen 411 STKLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNESTNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIR-TAT- 488 (888)
T ss_pred hhhhhcceEEEEechhhhhhhhhheeccceeEeeecCCCceeEEeecHHHhheeeccCCcccCCCCCCCceEEEE-eee-
Confidence 446689999876543 33555667888888999887776668888887665554322 22357999998 554
Q ss_pred cEEEEcCC------------HHHHHHHHHHHHHHHh
Q psy2209 131 PLVFGADN------------EQSYERWMKAMREATT 154 (156)
Q Consensus 131 ~~~~~a~s------------~~~~~~Wi~al~~a~~ 154 (156)
+.||--++ .+.++.|-.||+.|.+
T Consensus 489 ~vyfVge~p~~~~~~~~g~g~d~a~~w~~ai~~alM 524 (888)
T KOG4236|consen 489 TVYFVGENPSSTPGGESGVGLDAAQGWETAIQQALM 524 (888)
T ss_pred EEEEecCCCCCCccccccccchhhccCchhhhhccc
Confidence 56666666 4558999999998765
No 88
>KOG1737|consensus
Probab=95.94 E-value=0.0043 Score=52.66 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=60.3
Q ss_pred CcEEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCccc--ceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 61 SQHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDIKA--LLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 61 ~~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~~~--~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
....|||.+... ++|.+|||+|.++.|.||+....... .+.+.+....+... ....+.+...+...++..+
T Consensus 77 ~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~-----~~~~~~~~~~~~q~~~~~~ 151 (799)
T KOG1737|consen 77 ASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNG-----ERMDICSVDGSCQIYLVEL 151 (799)
T ss_pred ccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccC-----CCcccchhhcccchhhhhh
Confidence 346899988754 69999999999999999987665433 55666644333221 1122333222346678889
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMREAT 153 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a~ 153 (156)
.+..+.+.|+.+++.+.
T Consensus 152 ~~~~~~~~~~~~~~l~~ 168 (799)
T KOG1737|consen 152 SKKLQRQGWLHALELAP 168 (799)
T ss_pred hHHHhhcchhhhhhhcc
Confidence 99999999999998763
No 89
>KOG3727|consensus
Probab=95.60 E-value=0.0013 Score=53.25 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=52.4
Q ss_pred CceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCC---ceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHH
Q psy2209 74 NWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDN---FKYVFQLKHQGQDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 74 ~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~---~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
.|..+|++.....+.||++. ..|...|.+.||.+...-.... .+++..+.-++...+++.|+++++...||+|.+
T Consensus 378 ~f~t~~dl~~~~~~s~~~s~--~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~WMAaCr 455 (664)
T KOG3727|consen 378 YFFTFRDLHLSLYKSSEDSR--GAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARWMAACR 455 (664)
T ss_pred HHHHHHHHHHHHHhhHhhhc--CCCCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHHHHHhh
Confidence 34444444455666666664 5678888898888766433222 223333333456679999999999999999999
Q ss_pred HHHh
Q psy2209 151 EATT 154 (156)
Q Consensus 151 ~a~~ 154 (156)
-|+.
T Consensus 456 LASK 459 (664)
T KOG3727|consen 456 LASK 459 (664)
T ss_pred Hhhc
Confidence 8763
No 90
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.98 E-value=0.59 Score=31.39 Aligned_cols=52 Identities=10% Similarity=0.164 Sum_probs=34.4
Q ss_pred ceEEEccCeEEEEccCCCCceeEEEEEeC-CCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 99 LLSIPVLGYELEALNEQDNFKYVFQLKHQ-GQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 99 ~~~i~L~~~~~~~~~~~~~~~~~f~i~~~-~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
+..|.+....+....+. .+..|.|-.. ....|.++|.|.+..+.|+..|+..
T Consensus 62 K~~ikls~lglte~v~g--d~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~i 114 (133)
T cd01227 62 KQSLKMTAVGITENVKG--DTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKV 114 (133)
T ss_pred eeeEEeecccccccCCC--CccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHH
Confidence 44555544444333222 2456766533 3468999999999999999999864
No 91
>KOG2070|consensus
Probab=94.35 E-value=0.096 Score=42.30 Aligned_cols=91 Identities=15% Similarity=0.300 Sum_probs=66.4
Q ss_pred CcEEEEEEeccCC-CceEEEEEEeCCeEEEEccCCCccc---ceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 61 SQHSGWLHKKSGR-NWKRYWFVLKDQVMYKYKASEDIKA---LLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 61 ~~~~G~L~k~~~k-~Wk~r~~vL~~~~L~~yk~~~~~~~---~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
+++-|-...+.++ .=+.||++|=...|.++.-..+... .|.+++.|..+...++.....+.|.|....-......|
T Consensus 310 iiymg~v~Vqy~~ad~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~tG~iV~klEdte~~~nafeis~~ti~rIv~~c 389 (661)
T KOG2070|consen 310 IIYMGQVLVQYAGADEKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPTTGMIVTKLEDTENHRNAFEISGSTIERIVVSC 389 (661)
T ss_pred eEeeeehhhhhcCcchhhheeeeccceeeeeEeccccchhhhccccccceeEEeehhhhhcccccccccccchhheeecc
Confidence 3444444443322 3458999998888888775554432 77889999988887777777789998744444578899
Q ss_pred CCHHHHHHHHHHHHH
Q psy2209 137 DNEQSYERWMKAMRE 151 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~ 151 (156)
+++.+++.|+.+|+.
T Consensus 390 ~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 390 NNQQDLQEWVEHLNK 404 (661)
T ss_pred CChHHHHHHHHHhhh
Confidence 999999999999985
No 92
>KOG0248|consensus
Probab=93.52 E-value=0.069 Score=44.71 Aligned_cols=97 Identities=15% Similarity=0.194 Sum_probs=67.2
Q ss_pred CCCCcEEEEEEeccCCCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEc----------cCCCCc----eeEEE
Q psy2209 58 DSGSQHSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEAL----------NEQDNF----KYVFQ 123 (156)
Q Consensus 58 ~~~~~~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~----------~~~~~~----~~~f~ 123 (156)
+.....+|||.+.+-..-++.||.|.+-.++||++-.+..+.|.+.+...-.... .....+ .++..
T Consensus 355 p~~~~~~GwlT~vk~g~skkv~~alv~~~~~~~k~~~d~rp~g~l~~~~~h~~ee~~s~~sde~~e~~~~r~l~~~~~~l 434 (936)
T KOG0248|consen 355 PIDASISGWLTRVKCGLSKKVFAALVNQKLMFFKNSNDLVPNGFLCLQEKHNGTEEYSGSSDEQLETTKEHPQRKNNDSL 434 (936)
T ss_pred CCCCCcCcceeeeccccceeeeeeeeeeeeEEeecccccccccccchhhhhcceeeccCCchhhhhhhcCccccccCceE
Confidence 3445579999998877779999999999999999988888877776632211110 011111 24444
Q ss_pred EEe-CCCccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 124 LKH-QGQDPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 124 i~~-~~~~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
+.+ +.+..+||.-.+.++-.-|+-.+..|..
T Consensus 435 ~~~~~~~~p~yLi~~t~e~k~~wly~l~~A~g 466 (936)
T KOG0248|consen 435 CVQIANEDPVYLILRTSEDKEKWLYYLKSASG 466 (936)
T ss_pred EeccCCCCCEEEEeeeccccceeeeeehhhcc
Confidence 443 4566889998899998889888777654
No 93
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=93.38 E-value=1.5 Score=29.75 Aligned_cols=79 Identities=22% Similarity=0.345 Sum_probs=52.4
Q ss_pred ceEEEEEEeCCeEEEEccCCCccc-------------------ceEEEccCeEEEEccC-CCCceeEEEEEeC-------
Q psy2209 75 WKRYWFVLKDQVMYKYKASEDIKA-------------------LLSIPVLGYELEALNE-QDNFKYVFQLKHQ------- 127 (156)
Q Consensus 75 Wk~r~~vL~~~~L~~yk~~~~~~~-------------------~~~i~L~~~~~~~~~~-~~~~~~~f~i~~~------- 127 (156)
-.-.-||++.....+|+.....+. ...|++....+..... .....+.+.|.+.
T Consensus 49 ~e~~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQVR~~n~ad~e~~~vwEliH~kSe~egR 128 (160)
T cd01255 49 LELMCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQVRASSAADMESNFLWELIHLKSELEGR 128 (160)
T ss_pred ceEEEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeeeeecCCCcCcccceEEEEEeecccccCC
Confidence 344568888888888886533221 2245555444443221 1224588888864
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 128 GQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 128 ~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.+++|.|++.+.+..+..+.+|++..
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsil 154 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSIL 154 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHH
Confidence 34689999999999999999998754
No 94
>KOG1264|consensus
Probab=93.22 E-value=0.22 Score=42.82 Aligned_cols=57 Identities=28% Similarity=0.452 Sum_probs=41.5
Q ss_pred ceEEEccCeEEEEccCCCC-ceeEEEEEe--CCCccEEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 99 LLSIPVLGYELEALNEQDN-FKYVFQLKH--QGQDPLVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 99 ~~~i~L~~~~~~~~~~~~~-~~~~f~i~~--~~~~~~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
.|..++..+.++..+.... +.++|.|.. .+...+.|+|++++++.+|+++|+.++..
T Consensus 853 rgi~d~~~~nvv~~~q~~n~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~ 912 (1267)
T KOG1264|consen 853 RGILDLNTYNVVKAPQGKNQKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWK 912 (1267)
T ss_pred hccccccccceeecccccCCcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHH
Confidence 4455666666666554432 448888763 35567899999999999999999988753
No 95
>KOG0517|consensus
Probab=91.06 E-value=0.0029 Score=57.45 Aligned_cols=92 Identities=22% Similarity=0.347 Sum_probs=66.2
Q ss_pred cEEEEEEecc----------CCCceEEEEEEeCCeEEEEccCCCccc------ceEEEc--cCeEEEEccCCCCceeEEE
Q psy2209 62 QHSGWLHKKS----------GRNWKRYWFVLKDQVMYKYKASEDIKA------LLSIPV--LGYELEALNEQDNFKYVFQ 123 (156)
Q Consensus 62 ~~~G~L~k~~----------~k~Wk~r~~vL~~~~L~~yk~~~~~~~------~~~i~L--~~~~~~~~~~~~~~~~~f~ 123 (156)
.+.|+|+++- .+.|...||++..+.+.+|++.+.... .+..+| ..+.+....+..+++++|.
T Consensus 2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~~a~i~~a~dy~kkk~v~~ 2379 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELDMAAIEVASDYHKKKHVFL 2379 (2473)
T ss_pred HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcchhHHHHHHHHHHHhHhhh
Confidence 4788886652 148999999999999999998765432 222222 2222222334455678999
Q ss_pred EEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 124 LKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 124 i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+..+.+..|.|+|.++++|..|+.++..+.
T Consensus 2380 l~~~~gae~llq~k~ee~m~sWL~~~a~~~ 2409 (2473)
T KOG0517|consen 2380 LQLPPGAEHLLQAKDEEEMESWLRALAVKR 2409 (2473)
T ss_pred hcCCchHHHHHhhccHHHHHHHHHHHHHHH
Confidence 988888899999999999999999886554
No 96
>KOG3531|consensus
Probab=88.59 E-value=0.26 Score=42.35 Aligned_cols=93 Identities=22% Similarity=0.293 Sum_probs=64.0
Q ss_pred CcEEEEEEeccCCCceEEEEEEe-CCeEEEEccCCCcc---cceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEc
Q psy2209 61 SQHSGWLHKKSGRNWKRYWFVLK-DQVMYKYKASEDIK---ALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGA 136 (156)
Q Consensus 61 ~~~~G~L~k~~~k~Wk~r~~vL~-~~~L~~yk~~~~~~---~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a 136 (156)
....|-|.|..+++-++|-|-|- +-.||-.++..-.. -.|-|++. .++...+..-.-|++|.|. ......+.+|
T Consensus 750 ~ir~g~llK~skkgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~-l~~en~en~~s~p~~~ti~-~~qk~i~vsa 827 (1036)
T KOG3531|consen 750 FIRSGCLLKLSKKGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT-LTMENSENEWSVPHCFTIS-GAQKQIYVSA 827 (1036)
T ss_pred hhhcCCchhhccccchhhhhhhhhhhheeccCCCChhheeEeccCCceE-eeeecccccccCCceEEEe-ccceEEEEec
Confidence 34678888887777766655554 44444444422222 26666776 4554455555578999998 7778899999
Q ss_pred CCHHHHHHHHHHHHHHHhc
Q psy2209 137 DNEQSYERWMKAMREATTL 155 (156)
Q Consensus 137 ~s~~~~~~Wi~al~~a~~~ 155 (156)
.+..+...|+..++.+..+
T Consensus 828 st~~~sk~~~~~r~~~i~~ 846 (1036)
T KOG3531|consen 828 STRRESKKWEFDRRKAIDL 846 (1036)
T ss_pred cchhhhhhhhhccchhhhh
Confidence 9999999999988776543
No 97
>KOG3551|consensus
Probab=88.05 E-value=0.61 Score=36.75 Aligned_cols=93 Identities=16% Similarity=0.409 Sum_probs=61.6
Q ss_pred CCCcEEEEEEeccC----CCceEEEEEEeCCeEEEEccCCCc-----ccceEEEccCeEEEEccCCC-----CceeEEEE
Q psy2209 59 SGSQHSGWLHKKSG----RNWKRYWFVLKDQVMYKYKASEDI-----KALLSIPVLGYELEALNEQD-----NFKYVFQL 124 (156)
Q Consensus 59 ~~~~~~G~L~k~~~----k~Wk~r~~vL~~~~L~~yk~~~~~-----~~~~~i~L~~~~~~~~~~~~-----~~~~~f~i 124 (156)
..+.+-|||..+-. +.|+-.+.+|+...|.+|.+-... .|....+|..-.++...... +-...|..
T Consensus 290 ~evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~ 369 (506)
T KOG3551|consen 290 SEVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFAT 369 (506)
T ss_pred cchhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEE
Confidence 35668899987632 479999999999999999864332 34455555333333221111 11257777
Q ss_pred EeC---CCccEEEEcCCHHHHHHHHHHHHH
Q psy2209 125 KHQ---GQDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 125 ~~~---~~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
++. +-.++.|.+++..|+..|...|-.
T Consensus 370 RtGTrqGV~thlfrvEThrdLa~WtRslVq 399 (506)
T KOG3551|consen 370 RTGTRQGVETHLFRVETHRELAAWTRSLVQ 399 (506)
T ss_pred ecccccceEEEEEEeccHHHHHHHHHHHHH
Confidence 732 335899999999999999988743
No 98
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=86.80 E-value=2.7 Score=27.20 Aligned_cols=35 Identities=26% Similarity=0.573 Sum_probs=29.5
Q ss_pred ceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 118 FKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 118 ~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
..+.|.|. +..+..-|.|+|..+.+.|++.|..-.
T Consensus 69 ~~~yfgL~-T~~G~vEfec~~~~~~k~W~~gI~~mL 103 (110)
T PF08458_consen 69 ERRYFGLK-TAQGVVEFECDSQREYKRWVQGIQHML 103 (110)
T ss_pred eEEEEEEE-ecCcEEEEEeCChhhHHHHHHHHHHHH
Confidence 34789998 557789999999999999999997644
No 99
>KOG4407|consensus
Probab=86.50 E-value=0.022 Score=50.64 Aligned_cols=93 Identities=16% Similarity=0.222 Sum_probs=66.3
Q ss_pred CCcEEEEEEecc-----C-------CCceEEEEEEeCCeEEEEccCCCccc--------------ceEEEccCeEEEEcc
Q psy2209 60 GSQHSGWLHKKS-----G-------RNWKRYWFVLKDQVMYKYKASEDIKA--------------LLSIPVLGYELEALN 113 (156)
Q Consensus 60 ~~~~~G~L~k~~-----~-------k~Wk~r~~vL~~~~L~~yk~~~~~~~--------------~~~i~L~~~~~~~~~ 113 (156)
+..+.|||+.+. + +.|++.|.+|.+..|+.|++.....+ ...+.+.+|.+.+.-
T Consensus 922 d~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~nscltdI~y 1001 (1973)
T KOG4407|consen 922 DSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLNSCLTDIQY 1001 (1973)
T ss_pred hhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccccchhhhhh
Confidence 345899998752 1 27999999999999999997655221 233445555554433
Q ss_pred CCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 114 EQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 114 ~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
...++..+|.+...+-=.+.|++++.++|-.|+....+.
T Consensus 1002 setkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~S 1040 (1973)
T KOG4407|consen 1002 SETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSS 1040 (1973)
T ss_pred hhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhc
Confidence 344567899997555456899999999999999887543
No 100
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=79.50 E-value=12 Score=23.22 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=45.0
Q ss_pred eEEEEEEe----C-CeEEEEccCCCccc----ceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHH
Q psy2209 76 KRYWFVLK----D-QVMYKYKASEDIKA----LLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWM 146 (156)
Q Consensus 76 k~r~~vL~----~-~~L~~yk~~~~~~~----~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi 146 (156)
+.|+.+|. + ..++.++....... ...-+|.....+...+.......|.|.. ++.|+..|.|..|....|
T Consensus 4 K~r~Lclsv~~~~~~~v~l~k~K~~~~g~f~i~ktW~L~eL~~I~~~~~~~~~~~F~l~~--~k~y~W~a~s~~Ek~~Fi 81 (91)
T PF15277_consen 4 KPRYLCLSVTNSPRIQVRLHKVKQNDNGSFQIGKTWDLDELKAIDGINPDKDTPEFDLTF--DKPYYWEASSAKEKNTFI 81 (91)
T ss_dssp EEEEEEEEEETTETTEEEEEEEEE-CCS-EEEEEEEEGGG--EEEE-SSS--TTEEEEES--SSEEEEEESSHHHHHHHH
T ss_pred ccEEEEEEEecCCceEEEEEEEEecCCCcEEEeeEEehhhceeeeeecCCCCCcCEEEEE--CCCcEEEeCCHHHHHHHH
Confidence 56676662 2 23666664332221 3344566666655433332235888874 348999999999999999
Q ss_pred HHHHHHH
Q psy2209 147 KAMREAT 153 (156)
Q Consensus 147 ~al~~a~ 153 (156)
..|-+..
T Consensus 82 ~~L~k~~ 88 (91)
T PF15277_consen 82 RSLWKLY 88 (91)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9997654
No 101
>KOG3523|consensus
Probab=76.70 E-value=3.5 Score=34.48 Aligned_cols=33 Identities=27% Similarity=0.543 Sum_probs=25.4
Q ss_pred ceeEEEEEe---CC--CccEEEEcCCHHHHHHHHHHHH
Q psy2209 118 FKYVFQLKH---QG--QDPLVFGADNEQSYERWMKAMR 150 (156)
Q Consensus 118 ~~~~f~i~~---~~--~~~~~~~a~s~~~~~~Wi~al~ 150 (156)
.++.|.+.. .. .-.++|.|+++.+++.||.||.
T Consensus 554 ~~hlF~ltLl~N~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 554 RPHLFLLTLLSNHQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred ccceEEEehhhccCCCceeeeecCCchHHHHHHHHhcC
Confidence 457788762 12 2368999999999999999986
No 102
>KOG3521|consensus
Probab=76.26 E-value=5.2 Score=33.97 Aligned_cols=89 Identities=18% Similarity=0.208 Sum_probs=49.8
Q ss_pred cEEEEEEeccCCCc-eEEEEEEeCCeEEEEccCCC-cccceEE--E-ccCeEEEEccCCCCceeEEEEEe-----CCCcc
Q psy2209 62 QHSGWLHKKSGRNW-KRYWFVLKDQVMYKYKASED-IKALLSI--P-VLGYELEALNEQDNFKYVFQLKH-----QGQDP 131 (156)
Q Consensus 62 ~~~G~L~k~~~k~W-k~r~~vL~~~~L~~yk~~~~-~~~~~~i--~-L~~~~~~~~~~~~~~~~~f~i~~-----~~~~~ 131 (156)
+++|-|+.|.+|.- .-.+|.|--+.|.+.|.-.. ......| + +.+..+.... ..++.|-+++ .-...
T Consensus 428 lleGdlrmKegk~sK~DVhcfLfTDllLVcK~v~k~~drlKVIRpPll~dklv~q~~---~dpnsf~lVhLtEFh~a~~a 504 (846)
T KOG3521|consen 428 LLEGDLRMKEGKGSKADVHCFLFTDLLLVCKKVQKKADRLKVIRPPLLMDKLVCQYL---RDPNSFLLVHLTEFHTAQAA 504 (846)
T ss_pred hhccceecccCCCcccceeeeeehhHHHHhHHHhhhcccceeeccchhhcceeeeec---CCCCceEEEeechhhhhhhh
Confidence 47888888776533 35566654444444443222 2222222 1 1222222111 1234555543 33457
Q ss_pred EEEEcCCHHHHHHHHHHHHHHH
Q psy2209 132 LVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 132 ~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
|.|+|...++...|.++|+.|.
T Consensus 505 yt~hcs~p~d~~~W~D~l~~Aq 526 (846)
T KOG3521|consen 505 YTMHCSGPEDTLRWTDMLKMAQ 526 (846)
T ss_pred heeecCChhhHHHHHHHHHHHH
Confidence 8999999999999999999875
No 103
>KOG3551|consensus
Probab=74.83 E-value=5.9 Score=31.48 Aligned_cols=35 Identities=11% Similarity=0.377 Sum_probs=29.1
Q ss_pred eEEEEEeCCC-ccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 120 YVFQLKHQGQ-DPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 120 ~~f~i~~~~~-~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
.+|.|..+++ .+..+.|.+..++..|..||+.++.
T Consensus 237 R~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~ 272 (506)
T KOG3551|consen 237 RQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVN 272 (506)
T ss_pred ceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHh
Confidence 5788876555 4778999999999999999998765
No 104
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=73.85 E-value=29 Score=24.69 Aligned_cols=84 Identities=14% Similarity=0.202 Sum_probs=57.4
Q ss_pred CCCcEEEEEEeccCC-CceEEEEEEeCCeEEEEc-----cCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccE
Q psy2209 59 SGSQHSGWLHKKSGR-NWKRYWFVLKDQVMYKYK-----ASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPL 132 (156)
Q Consensus 59 ~~~~~~G~L~k~~~k-~Wk~r~~vL~~~~L~~yk-----~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~ 132 (156)
..+.++....|-.++ .-..|.++|++..+|... ..........|+|.....+......+ ..|.|..++..-+
T Consensus 48 e~vlFs~~v~K~nr~~K~~~R~livT~~~iY~l~~~~~~~~~~~~~kr~i~l~~I~~IsvS~~~D--~~~vihv~~~~D~ 125 (199)
T PF06017_consen 48 EKVLFSDRVQKYNRRNKPQPRILIVTDKAIYLLDQRKVKDPKKYKLKRRIPLSDITGISVSPLSD--NFFVIHVPGEGDL 125 (199)
T ss_pred cceEEEEEEEEecCCCCccceEEEEeCCeEEEEEEeecCCceeeEEEeccCcccccEEEEccCCC--CEEEEEECCCCCE
Confidence 367788888887764 668999999999999996 44444557888887776555433333 2444443555558
Q ss_pred EEEcCCHHHHHH
Q psy2209 133 VFGADNEQSYER 144 (156)
Q Consensus 133 ~~~a~s~~~~~~ 144 (156)
.|.++...|+-.
T Consensus 126 il~~~~k~Elv~ 137 (199)
T PF06017_consen 126 ILESDFKTELVT 137 (199)
T ss_pred EEEeCcHHHHHH
Confidence 899888866543
No 105
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=73.72 E-value=2.3 Score=23.37 Aligned_cols=20 Identities=30% Similarity=0.775 Sum_probs=18.1
Q ss_pred CCceEEEEEEeCCeEEEEcc
Q psy2209 73 RNWKRYWFVLKDQVMYKYKA 92 (156)
Q Consensus 73 k~Wk~r~~vL~~~~L~~yk~ 92 (156)
+.|.+.|..+.+..|.+|+-
T Consensus 28 r~wEKKWVtv~dtslriyKW 47 (52)
T PF04714_consen 28 RKWEKKWVTVGDTSLRIYKW 47 (52)
T ss_pred HHHhhceEEeccceEEEEEE
Confidence 38999999999999999984
No 106
>KOG2996|consensus
Probab=61.61 E-value=26 Score=29.63 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=57.5
Q ss_pred CcEEEEEEeccC--CCceEEEEEEeCCeEEEEccCCCccc-ceEEEccCeEEEEccC--CC-------CceeEEEEEeC-
Q psy2209 61 SQHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKASEDIKA-LLSIPVLGYELEALNE--QD-------NFKYVFQLKHQ- 127 (156)
Q Consensus 61 ~~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~~~~~~~-~~~i~L~~~~~~~~~~--~~-------~~~~~f~i~~~- 127 (156)
+...|-|....- +.=+.||.-|-+..+...|..++... +..|.|..+.+...+- .. ...+.|.|.++
T Consensus 406 pkiDGElki~s~~~~tkqdRyiFLfDkvviVCKrkG~sy~lke~i~l~~y~m~d~~~~~kd~kk~~~~~ws~~f~lI~tq 485 (865)
T KOG2996|consen 406 PKIDGELKITSTQAHTKQDRYIFLFDKVVIVCKRKGDSYELKEIIYLNAYKMSDDPIDDKDNKKVSTITWSYGFYLIHTQ 485 (865)
T ss_pred CCcCceEEEeehhcCCccceEEeEecceEEEeeccCcchhHHHHHHHHhhccccCCCCchhhhhccceeeeeeEEEEEEc
Confidence 345566655431 23467777777777777777666543 3344443333332211 11 13477877765
Q ss_pred CCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 128 GQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 128 ~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+.+.+.|.+.+++..+.||.++..|.
T Consensus 486 g~ngl~fy~Kte~~kkkWmeqfema~ 511 (865)
T KOG2996|consen 486 GRNGLEFYCKTEDLKKKWMEQFEMAK 511 (865)
T ss_pred CCcceEEEEecHHHHHHHHHHHHHHH
Confidence 44679999999999999999997664
No 107
>KOG4095|consensus
Probab=60.75 E-value=3.9 Score=27.86 Aligned_cols=19 Identities=32% Similarity=0.870 Sum_probs=18.0
Q ss_pred CCceEEEEEEeCCeEEEEc
Q psy2209 73 RNWKRYWFVLKDQVMYKYK 91 (156)
Q Consensus 73 k~Wk~r~~vL~~~~L~~yk 91 (156)
+.|.++|+.+.+..|.+||
T Consensus 29 RrWEKKwVtvgDTslRIyK 47 (165)
T KOG4095|consen 29 RRWEKKWVTVGDTSLRIYK 47 (165)
T ss_pred HHHhhheEeecccceEEEE
Confidence 4899999999999999998
No 108
>KOG1264|consensus
Probab=60.35 E-value=17 Score=32.04 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=28.9
Q ss_pred CCCcEEEEEEeccC--CCceEEEEEEeCCeEEEEcc
Q psy2209 59 SGSQHSGWLHKKSG--RNWKRYWFVLKDQVMYKYKA 92 (156)
Q Consensus 59 ~~~~~~G~L~k~~~--k~Wk~r~~vL~~~~L~~yk~ 92 (156)
....+.|.|+.+.. +.|...+|||.+..|+|...
T Consensus 473 ~nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e 508 (1267)
T KOG1264|consen 473 KNSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDE 508 (1267)
T ss_pred hhhhhcceEEEecCCCCceeeeEEEEecceeEeehh
Confidence 34568999999876 68999999999999999864
No 109
>KOG3520|consensus
Probab=59.83 E-value=22 Score=32.34 Aligned_cols=90 Identities=17% Similarity=0.244 Sum_probs=52.0
Q ss_pred CcEEEEEEeccC-CCceEEEEEEe---------CCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeC--C
Q psy2209 61 SQHSGWLHKKSG-RNWKRYWFVLK---------DQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQ--G 128 (156)
Q Consensus 61 ~~~~G~L~k~~~-k~Wk~r~~vL~---------~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~--~ 128 (156)
.++.|-|.-+.. ...+....+|- .+.-|+|++-.. -..+|+|....+..+. ...+..|-|... +
T Consensus 621 LihdG~Ltwk~~~gk~~dv~vlLLtD~LvlLqeqD~Kyifksl~~--~spVisL~~livRevA--td~ka~FlIs~s~~~ 696 (1167)
T KOG3520|consen 621 LIHDGPLTWKTARGKTKDVHVLLLTDILVLLQEKDQKYIFKSLDK--KSPVISLQKLIVREVA--TDEKAFFLISMSDQG 696 (1167)
T ss_pred eeccCceEEeeccCchhhhHHHHHHHHHHHhhhcCceeEeecccc--CCCceehHHHHHHHHh--ccccceEEEecCCCC
Confidence 357777765432 23333333321 222444444322 2456666554222221 123457777744 4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHHHHh
Q psy2209 129 QDPLVFGADNEQSYERWMKAMREATT 154 (156)
Q Consensus 129 ~~~~~~~a~s~~~~~~Wi~al~~a~~ 154 (156)
...|-+.|.+.+|.+.||+.|+.++.
T Consensus 697 pqmYEL~a~T~serntW~~li~~~v~ 722 (1167)
T KOG3520|consen 697 PEMYELVAQSKSERNTWIQLIQDAVA 722 (1167)
T ss_pred CeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999999998764
No 110
>PF14844 PH_BEACH: PH domain associated with Beige/BEACH; PDB: 1MI1_B 1T77_C.
Probab=57.19 E-value=46 Score=20.87 Aligned_cols=50 Identities=4% Similarity=-0.033 Sum_probs=34.0
Q ss_pred cceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHH
Q psy2209 98 ALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMK 147 (156)
Q Consensus 98 ~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~ 147 (156)
.....++.....+..--.--++..++|...++++++|..++.+++++=++
T Consensus 54 ~~~~w~~~~I~~v~~RRyllr~~AlEiF~~dg~s~f~~F~~~~~R~~v~~ 103 (106)
T PF14844_consen 54 KSKRWPLSDIKEVHKRRYLLRDTALEIFFSDGRSYFFNFESKKERDEVYN 103 (106)
T ss_dssp TCEEEEGGGEEEEEEEEETTEEEEEEEEETTS-EEEEE-SSHHHHHHHHC
T ss_pred ceEEEEHHHhHHHHHHHhcCcceEEEEEEcCCcEEEEEcCCHHHHHHHHH
Confidence 36667777766665432233457888888889999999999999876543
No 111
>KOG4047|consensus
Probab=56.92 E-value=8.1 Score=31.14 Aligned_cols=90 Identities=9% Similarity=-0.077 Sum_probs=49.0
Q ss_pred CcEEEEEEecc----CCCceEEEEEEeCCe-------EEEEcc--CCCccc----ceEEEccCeEEEEccCCCC---cee
Q psy2209 61 SQHSGWLHKKS----GRNWKRYWFVLKDQV-------MYKYKA--SEDIKA----LLSIPVLGYELEALNEQDN---FKY 120 (156)
Q Consensus 61 ~~~~G~L~k~~----~k~Wk~r~~vL~~~~-------L~~yk~--~~~~~~----~~~i~L~~~~~~~~~~~~~---~~~ 120 (156)
..+.|++..+. .+.|.+.|++|..+. +.++.. +...-+ ...+.|.++..+....... ..+
T Consensus 8 ~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~~S~e~~~~~~~~~~i~ 87 (429)
T KOG4047|consen 8 LVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNLFSFESGRRCQTGPGIT 87 (429)
T ss_pred ccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccceeeecccccccCCCce
Confidence 45677776543 469999999996543 223311 111111 3556666665554322221 123
Q ss_pred EEEEEeCCCccEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 121 VFQLKHQGQDPLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 121 ~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
.|....+.. +|-+.+.-+..+|+++|..-+
T Consensus 88 ~~f~~~a~e---~~~~~q~l~~~~w~~~i~~~~ 117 (429)
T KOG4047|consen 88 AFFCDRAEE---LFNMLQDLMQANWINAIEEPA 117 (429)
T ss_pred EEEecchHH---HHHHHHHHHhhhhhhhhhhcc
Confidence 333321222 677777778888999997543
No 112
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=50.99 E-value=3.5 Score=31.81 Aligned_cols=24 Identities=25% Similarity=0.544 Sum_probs=18.2
Q ss_pred CCcEEEEEEeccC-------CCceEEEEEEe
Q psy2209 60 GSQHSGWLHKKSG-------RNWKRYWFVLK 83 (156)
Q Consensus 60 ~~~~~G~L~k~~~-------k~Wk~r~~vL~ 83 (156)
.+.++|++.++.. +.||+|||+|+
T Consensus 285 ~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 285 VVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred hhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 4668999877642 37999999884
No 113
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=50.90 E-value=2.8 Score=32.34 Aligned_cols=23 Identities=30% Similarity=0.687 Sum_probs=18.0
Q ss_pred CcEEEEEEeccC-------CCceEEEEEEe
Q psy2209 61 SQHSGWLHKKSG-------RNWKRYWFVLK 83 (156)
Q Consensus 61 ~~~~G~L~k~~~-------k~Wk~r~~vL~ 83 (156)
+.++|+|.|+.. +.||+|||.|.
T Consensus 283 ~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~ 312 (313)
T cd05394 283 HLKEGEMYKRAQGRTRIGKKNFKKRWFCLT 312 (313)
T ss_pred hhHHHHHHhhccCCCccccccchhheeecC
Confidence 568899988642 37999999985
No 114
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=49.15 E-value=4.4 Score=31.25 Aligned_cols=24 Identities=29% Similarity=0.652 Sum_probs=17.8
Q ss_pred CCcEEEEEEecc--C-----CCceEEEEEEe
Q psy2209 60 GSQHSGWLHKKS--G-----RNWKRYWFVLK 83 (156)
Q Consensus 60 ~~~~~G~L~k~~--~-----k~Wk~r~~vL~ 83 (156)
.+.++|+|.++. + +.||+|||+|+
T Consensus 279 ~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt 309 (310)
T cd05134 279 ILLKEGFMIKRAQGRKRFGMKNFKKRWFRLT 309 (310)
T ss_pred chhhhhhHHHhcccCCcccccchhheeeecC
Confidence 356888888743 2 47999999986
No 115
>KOG0592|consensus
Probab=43.72 E-value=70 Score=26.94 Aligned_cols=84 Identities=17% Similarity=0.172 Sum_probs=52.2
Q ss_pred cEEEEEEeccCCCceEEEEEEeC-CeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHH
Q psy2209 62 QHSGWLHKKSGRNWKRYWFVLKD-QVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQ 140 (156)
Q Consensus 62 ~~~G~L~k~~~k~Wk~r~~vL~~-~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~ 140 (156)
.+.|.|.++.+=.-++|.+.|.. +.+.|+. +......+.|++......... ....|.|. +..++|+|.- -+.
T Consensus 452 ~k~~~l~k~~~lf~rkr~lllTn~~rll~~~-~~~~~lk~eip~~~~~~~e~~----n~~~~~i~-TP~k~~~l~d-~~~ 524 (604)
T KOG0592|consen 452 LKEGALEKRQGLFARKRMLLLTNGPRLLYVD-PQNLVLKGEIPWSPDLRVELK----NSSTFFIH-TPNKVYYLED-PEQ 524 (604)
T ss_pred HhHHHHHhhhhhhhceeEEEecCCCeEEEEe-cccceeccccccCcccceeec----cCcceEEE-CCccceeccC-ccc
Confidence 34555555432234678888864 5555555 555566888888664443331 23577776 5557777765 345
Q ss_pred HHHHHHHHHHHH
Q psy2209 141 SYERWMKAMREA 152 (156)
Q Consensus 141 ~~~~Wi~al~~a 152 (156)
.+..|..+|..+
T Consensus 525 ~as~w~~ai~~~ 536 (604)
T KOG0592|consen 525 RASVWCKAIETV 536 (604)
T ss_pred chhHHHHhhhhh
Confidence 567899999765
No 116
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=39.92 E-value=8.4 Score=30.04 Aligned_cols=25 Identities=36% Similarity=0.667 Sum_probs=18.2
Q ss_pred CCCcEEEEEEeccC-------C-CceEEEEEEe
Q psy2209 59 SGSQHSGWLHKKSG-------R-NWKRYWFVLK 83 (156)
Q Consensus 59 ~~~~~~G~L~k~~~-------k-~Wk~r~~vL~ 83 (156)
+...++|+|.|+.. + .||+|||.|.
T Consensus 301 ~~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 301 SVTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred CchhhhhHhhhccccCCCCcccccccceeeecC
Confidence 34568999987641 2 6999999874
No 117
>PF14784 ECIST_Cterm: C-terminal domain of the ECSIT protein
Probab=37.85 E-value=1.1e+02 Score=20.39 Aligned_cols=16 Identities=19% Similarity=0.675 Sum_probs=13.7
Q ss_pred cCCHHHHHHHHHHHHH
Q psy2209 136 ADNEQSYERWMKAMRE 151 (156)
Q Consensus 136 a~s~~~~~~Wi~al~~ 151 (156)
..+...+..||.-|++
T Consensus 96 ~~~~~sL~~WI~~Lq~ 111 (126)
T PF14784_consen 96 TSDKDSLLSWIRGLQE 111 (126)
T ss_pred CCCHHHHHHHHHHHHh
Confidence 5678889999999986
No 118
>KOG1170|consensus
Probab=30.87 E-value=1.6 Score=37.68 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=46.4
Q ss_pred CceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHHHHHHHHHHHHH
Q psy2209 74 NWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQSYERWMKAMREA 152 (156)
Q Consensus 74 ~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a 152 (156)
.|+.+++.+++..--+|......-.-..+++....+... ....-++.|.+. +.-+...+++++..++..|+.+++..
T Consensus 17 a~k~r~~~~k~~~~~~vakTa~g~~~~~~d~t~a~~~eS-s~~n~~~sf~vi-~~~rk~r~~adn~ke~e~wi~~~kt~ 93 (1099)
T KOG1170|consen 17 AWKQSILRAKDRMPEKVAKTASGPLFALLDLTSAHVAES-STNNPRPSFCVI-TPVRKHRLCADNRKEMEKWINQSKTP 93 (1099)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCccHHHHhccccccccc-ccCCCCCCeeEe-cccHHhhhhccchhHHHHhhccccch
Confidence 688888888776633333222111122333333332222 111223677777 66678999999999999999998754
No 119
>PF07831 PYNP_C: Pyrimidine nucleoside phosphorylase C-terminal domain; InterPro: IPR013102 This domain is found at the C-terminal end of the large alpha/beta domain making up various pyrimidine nucleoside phosphorylases [, ]. It has slightly different conformations in different members of this family. For example, in pyrimidine nucleoside phosphorylase (PYNP, P77826 from SWISSPROT) there is an added three-stranded anti-parallel beta sheet as compared to other members of the family, such as Escherichia coli thymidine phosphorylase (TP, P07650 from SWISSPROT) []. The domain contains an alpha/ beta hammerhead fold and residues in this domain seem to be important in formation of the homodimer []. ; GO: 0016763 transferase activity, transferring pentosyl groups, 0006213 pyrimidine nucleoside metabolic process; PDB: 1AZY_A 1OTP_A 2TPT_A 3H5Q_A 1BRW_A 2WK5_C 2J0F_C 2WK6_B 1UOU_A 2DSJ_B ....
Probab=30.18 E-value=62 Score=19.25 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=25.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHHHHHhcC
Q psy2209 127 QGQDPLVFGADNEQSYERWMKAMREATTLS 156 (156)
Q Consensus 127 ~~~~~~~~~a~s~~~~~~Wi~al~~a~~~s 156 (156)
.++..+.+.++++.....++..|+.|..+|
T Consensus 46 ~Gd~l~~i~~~~~~~~~~a~~~~~~a~~Is 75 (75)
T PF07831_consen 46 KGDPLATIYANDEARLEEAVERLRAAITIS 75 (75)
T ss_dssp TTSEEEEEEESSSSHHHHHHHHHHHHEEEE
T ss_pred CCCeEEEEEcCChHHHHHHHHHHHhCcccC
Confidence 566677899999999999999999887654
No 120
>KOG1729|consensus
Probab=29.09 E-value=12 Score=28.59 Aligned_cols=90 Identities=16% Similarity=0.244 Sum_probs=55.0
Q ss_pred EEEEEEeccCCCceEEEEEEeCCeEEEEccCCCc---ccceEEEccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCH
Q psy2209 63 HSGWLHKKSGRNWKRYWFVLKDQVMYKYKASEDI---KALLSIPVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNE 139 (156)
Q Consensus 63 ~~G~L~k~~~k~Wk~r~~vL~~~~L~~yk~~~~~---~~~~~i~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~ 139 (156)
.+|-+.+..++.-+.+.|.|..+.+.|-.-..+. .....+++.+.......+........+|. +..+.+.+.+.++
T Consensus 48 ~q~~~~k~~rk~~q~r~~~l~~D~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~-S~~ks~~~~~as~ 126 (288)
T KOG1729|consen 48 RQGTLVKRCRKKLQSRSFFLFNDILVYGNIVSDNKLLNKNHIIPLEGVSQESRSDNERVRNGWQIL-SALKSFTVLAASQ 126 (288)
T ss_pred hhhhhHHHHhcccccccccccccchhhcccccCHHHHhHHhcccccchhhhhhccccccccchhhh-cccchhhhhcchh
Confidence 3455544444557888888877777765433322 22444455444433333333333467776 5666788999999
Q ss_pred HHHHHHHHHHHHHH
Q psy2209 140 QSYERWMKAMREAT 153 (156)
Q Consensus 140 ~~~~~Wi~al~~a~ 153 (156)
.+..+|+..|.++.
T Consensus 127 ~ek~e~~~~i~~~~ 140 (288)
T KOG1729|consen 127 TEKNEWQNHITECV 140 (288)
T ss_pred hhhHHHHHHHHHHH
Confidence 99999998886653
No 121
>KOG2677|consensus
Probab=26.94 E-value=1.6e+02 Score=25.56 Aligned_cols=79 Identities=13% Similarity=0.213 Sum_probs=47.2
Q ss_pred CCceEEEEEEeC-CeEEEEccCCCcccceEEEccCeEEEEcc-----CCCCceeEEEEE-----------------eCC-
Q psy2209 73 RNWKRYWFVLKD-QVMYKYKASEDIKALLSIPVLGYELEALN-----EQDNFKYVFQLK-----------------HQG- 128 (156)
Q Consensus 73 k~Wk~r~~vL~~-~~L~~yk~~~~~~~~~~i~L~~~~~~~~~-----~~~~~~~~f~i~-----------------~~~- 128 (156)
++|.-.|+.|.+ |.|+.|-..+..+|...+.|..+.....+ +.-++.+...|. ++.
T Consensus 466 R~WgPifvkl~~~g~LqlYyeqglekPf~E~~L~~~~~lSep~lqnydv~GkIHtvki~~V~YkEK~ky~pk~~v~H~a~ 545 (922)
T KOG2677|consen 466 RHWGPIFVKLTDTGYLQLYYEQGLEKPFREFKLEICHELSEPRLQNYDVNGKIHTVKIDRVTYKEKKKYQPKPAVAHTAE 545 (922)
T ss_pred ccccceEEEEcCCceEEEeecccccchHHHHhhhhhhccCchhhhccccccceeEEEEEEEEeehhcccCCCCccccchh
Confidence 589999999976 49999988888777666655433222211 111222333332 111
Q ss_pred -CccEEEEcCCHHHHHHHHHHHHH
Q psy2209 129 -QDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 129 -~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
...+-|..-|..+....|.+...
T Consensus 546 ~eq~lKlGstny~dfl~FittVed 569 (922)
T KOG2677|consen 546 REQVLKLGSTNYDDFLSFITTVED 569 (922)
T ss_pred hhhhhhccCCcHHHHHHHHHHHHH
Confidence 12345777788888888777653
No 122
>KOG0689|consensus
Probab=26.45 E-value=84 Score=25.73 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=24.2
Q ss_pred eeEEEEEeC---CCccEEEEcCCHHHHHHHHHHHHH
Q psy2209 119 KYVFQLKHQ---GQDPLVFGADNEQSYERWMKAMRE 151 (156)
Q Consensus 119 ~~~f~i~~~---~~~~~~~~a~s~~~~~~Wi~al~~ 151 (156)
+..|.|-.. ....|.++|.+.++.+.|+.+|-.
T Consensus 323 ~~rF~i~~r~~~~~~~~vlqa~s~~~k~~W~~~i~~ 358 (448)
T KOG0689|consen 323 ASRFEIWFRGRKKREAYVLQAGSKEIKYAWTRAISS 358 (448)
T ss_pred CcchhhhhhcccccceeEEeeCCHHHHHHHHHHHHH
Confidence 345655422 224699999999999999999854
No 123
>KOG1450|consensus
Probab=25.66 E-value=58 Score=27.87 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=53.0
Q ss_pred CceEEEEEEeCCeEEEEccCCCcccce-------EE-----EccCeEEEEccCCCCceeEEEEEeCCCccEEEEcCCHHH
Q psy2209 74 NWKRYWFVLKDQVMYKYKASEDIKALL-------SI-----PVLGYELEALNEQDNFKYVFQLKHQGQDPLVFGADNEQS 141 (156)
Q Consensus 74 ~Wk~r~~vL~~~~L~~yk~~~~~~~~~-------~i-----~L~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~a~s~~~ 141 (156)
.|...|..+.+..++||.........+ .- .+.+...............+.+.......+++...++..
T Consensus 272 ~~~~~~~~~t~~~~~~~~~~~~~~~s~~~~~~~~~~~~~sps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~net~ 351 (650)
T KOG1450|consen 272 VWETSTDALTGNPLYYYSDTGSTTWSGHHSPPEKAEIAQSPSLSPAMVSASKNKSTRKNTLWLTTNRTSKVLNRSHNETS 351 (650)
T ss_pred ccccchhhcccccceeecccCcccccCCCCccccccCCCCcccchhhhccccccCCccceeeeeecCCceeeecCCCCcc
Confidence 699999999999999998765443332 00 111111111112223447888876777789999999999
Q ss_pred HHHHHHHHHHHH
Q psy2209 142 YERWMKAMREAT 153 (156)
Q Consensus 142 ~~~Wi~al~~a~ 153 (156)
..+|-.++....
T Consensus 352 ~~d~~~~~~~~~ 363 (650)
T KOG1450|consen 352 FEDWSSNLPEVI 363 (650)
T ss_pred ccchhhcchhhh
Confidence 999988876543
No 124
>PF02831 gpW: gpW; InterPro: IPR004174 GpW is a 68 residue protein known to be present in phage particles. Extracts of phage-infected cells lacking GpW contain DNA-filled heads, and active tails, but no infectious virions. GpW is required for the addition of GpFII to the head, which is, in turn, required for the attachment of tails. Since GpFII and tails are known to be attached at the connector, GpW is also likely to assemble at this site. The addition of GpW to filled heads increases the DNase resistance of the packaged DNA, suggesting that GpW either forms a plug at the connector to prevent ejection of the DNA, or binds directly to the DNA. The large number of positively charged residues in GpW (its calculated pI is 10.8) is consistent with a role in DNA interaction [].; GO: 0019067 viral assembly, maturation, egress, and release; PDB: 2L6Q_A 2L6R_A 1HYW_A.
Probab=25.49 E-value=1.5e+02 Score=17.40 Aligned_cols=33 Identities=3% Similarity=0.192 Sum_probs=26.3
Q ss_pred EEEEeCCCccEEEEcCCHHHHHHHHHHHHHHHhc
Q psy2209 122 FQLKHQGQDPLVFGADNEQSYERWMKAMREATTL 155 (156)
Q Consensus 122 f~i~~~~~~~~~~~a~s~~~~~~Wi~al~~a~~~ 155 (156)
-.+. .+++...+...|..++..||.-|+....+
T Consensus 24 vsv~-~dgrsV~Yt~a~i~~L~~yI~~L~~~Lg~ 56 (68)
T PF02831_consen 24 VSVQ-GDGRSVTYTQANIGDLRAYIQQLEAQLGI 56 (68)
T ss_dssp EEEE-ETTEEEEEEGGGHHHHHHHHHHHHHHTTS
T ss_pred eEee-cCCeEEEEecCCHHHHHHHHHHHHHHhCc
Confidence 3355 44488999999999999999999887543
No 125
>KOG4471|consensus
Probab=22.75 E-value=2.9e+02 Score=23.74 Aligned_cols=35 Identities=11% Similarity=0.315 Sum_probs=28.6
Q ss_pred eEEEEEeCCCccEEEEcCCHHHHH-HHHHHHHHHHh
Q psy2209 120 YVFQLKHQGQDPLVFGADNEQSYE-RWMKAMREATT 154 (156)
Q Consensus 120 ~~f~i~~~~~~~~~~~a~s~~~~~-~Wi~al~~a~~ 154 (156)
+.++|...+.+...++...++..+ .|+..|.+++.
T Consensus 102 ~~L~i~CKDmr~lR~~fk~~~q~r~~~~e~L~~~~~ 137 (717)
T KOG4471|consen 102 FGLEITCKDMRNLRCAFKQEEQCRRDWFERLNRAAF 137 (717)
T ss_pred eeEEEEeccccceeeecCcccccHHHHHHHHHHhcC
Confidence 677777778888899988888777 99999988754
No 126
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=22.35 E-value=1.2e+02 Score=22.41 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=20.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHHHH
Q psy2209 131 PLVFGADNEQSYERWMKAMREAT 153 (156)
Q Consensus 131 ~~~~~a~s~~~~~~Wi~al~~a~ 153 (156)
+.+++|++.+++-.|+..|+.|.
T Consensus 250 ~~~iaapsREdave~l~iik~a~ 272 (290)
T COG4026 250 TVYIAAPSREDAVEELEIIKEAI 272 (290)
T ss_pred eeeeecCchHHHHHHHHHHHHHH
Confidence 46899999999999999999874
No 127
>PLN03194 putative disease resistance protein; Provisional
Probab=20.78 E-value=1.1e+02 Score=21.89 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHHHHHHhcC
Q psy2209 138 NEQSYERWMKAMREATTLS 156 (156)
Q Consensus 138 s~~~~~~Wi~al~~a~~~s 156 (156)
+.+..+.|..||..++.++
T Consensus 133 ~~e~v~~Wr~AL~~va~l~ 151 (187)
T PLN03194 133 PDEEIRRFNWALEEAKYTV 151 (187)
T ss_pred CHHHHHHHHHHHHHHhccc
Confidence 5678899999999998764
No 128
>KOG1329|consensus
Probab=20.77 E-value=87 Score=27.86 Aligned_cols=85 Identities=13% Similarity=0.276 Sum_probs=51.0
Q ss_pred cEEEEEEeccC----CCceEEEEEEeCCeEEEEccCCCcccceEEEccCeEEEEc--cCCCCceeEEEEEeCCCccEEEE
Q psy2209 62 QHSGWLHKKSG----RNWKRYWFVLKDQVMYKYKASEDIKALLSIPVLGYELEAL--NEQDNFKYVFQLKHQGQDPLVFG 135 (156)
Q Consensus 62 ~~~G~L~k~~~----k~Wk~r~~vL~~~~L~~yk~~~~~~~~~~i~L~~~~~~~~--~~~~~~~~~f~i~~~~~~~~~~~ 135 (156)
.+.|++.++-+ ..|.++|..+.+..+.|.++... .+..++........ .+....+..|.+. ...+.+.+.
T Consensus 176 h~~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~~---~~~~~Il~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 251 (887)
T KOG1329|consen 176 HKAGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHRI---GGWFPILDNDGKPHQKGSNESLRLGFTPM-EKDRNLKLG 251 (887)
T ss_pred ccccEEEEeecCCccccceeEEEEeccchhhhhccccc---cceeeeeccCCccccCCcccceEEeeEee-chhhhhhhe
Confidence 46788887632 27999999999999888886221 22222211111111 1111123455554 556778888
Q ss_pred cCCHHHHHHHHHHHH
Q psy2209 136 ADNEQSYERWMKAMR 150 (156)
Q Consensus 136 a~s~~~~~~Wi~al~ 150 (156)
+.+..+...|..++-
T Consensus 252 ~~s~~~~r~~~~~~~ 266 (887)
T KOG1329|consen 252 CKSGRSFRGWPGTIF 266 (887)
T ss_pred eccccccCCccceee
Confidence 888888887876653
No 129
>PF11423 Repressor_Mnt: Regulatory protein Mnt; InterPro: IPR024421 Mnt is a repressor which is involved in the genetic switch between lysogenic and lytic growth in bacteriophage P22. The C-terminal domain of the protein consists of a dimer of two antiparallel coiled coils with a right handed twist, which is both stronger and has closer inter-helical separation compared with those found in left-handed coiled coils []. This entry is represented by Bacteriophage P22, Mnt. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; PDB: 1QEY_C 1MNT_B.
Probab=20.14 E-value=29 Score=16.72 Aligned_cols=9 Identities=33% Similarity=0.634 Sum_probs=6.0
Q ss_pred Chhhhhhhh
Q psy2209 1 MFERIKAVA 9 (156)
Q Consensus 1 ~~~~~~~~~ 9 (156)
|||+|+.+-
T Consensus 19 VfetLK~~Y 27 (30)
T PF11423_consen 19 VFETLKDMY 27 (30)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 477777653
Done!