Query psy2211
Match_columns 100
No_of_seqs 152 out of 1390
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 19:04:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w8t_A SPT, serine palmitoyltr 98.2 3E-06 1E-10 64.7 6.3 59 23-98 44-103 (427)
2 3kki_A CAI-1 autoinducer synth 98.1 2.5E-06 8.4E-11 64.3 3.7 39 58-97 59-97 (409)
3 3tqx_A 2-amino-3-ketobutyrate 98.1 1.9E-05 6.4E-10 58.5 8.4 64 18-98 19-82 (399)
4 1fc4_A 2-amino-3-ketobutyrate 97.8 5.6E-05 1.9E-09 56.4 7.3 72 9-96 8-82 (401)
5 1bs0_A Protein (8-amino-7-oxon 97.2 0.0008 2.7E-08 49.7 6.4 55 26-97 23-77 (384)
6 2bwn_A 5-aminolevulinate synth 97.2 0.00027 9.1E-09 52.7 3.5 41 56-97 44-84 (401)
7 3a2b_A Serine palmitoyltransfe 97.1 0.00072 2.5E-08 50.3 5.4 62 16-94 17-78 (398)
8 3lws_A Aromatic amino acid bet 96.2 0.00065 2.2E-08 49.7 -0.5 32 58-90 3-35 (357)
9 2ord_A Acoat, acetylornithine 95.1 0.012 4.1E-07 43.7 2.9 34 58-93 40-76 (397)
10 3n5m_A Adenosylmethionine-8-am 95.1 0.011 3.9E-07 45.0 2.8 32 58-91 49-83 (452)
11 2e7u_A Glutamate-1-semialdehyd 95.0 0.02 6.8E-07 43.1 3.9 31 58-91 52-85 (424)
12 3dxv_A Alpha-amino-epsilon-cap 95.0 0.014 5E-07 44.0 3.1 31 58-90 43-76 (439)
13 3hmu_A Aminotransferase, class 94.9 0.012 4.1E-07 45.9 2.5 34 58-93 55-91 (472)
14 3i5t_A Aminotransferase; pyrid 94.8 0.019 6.6E-07 44.7 3.4 35 58-94 54-91 (476)
15 3nx3_A Acoat, acetylornithine 94.8 0.017 5.9E-07 42.8 3.0 34 58-93 36-72 (395)
16 3gju_A Putative aminotransfera 94.7 0.021 7.2E-07 43.8 3.3 33 58-92 51-86 (460)
17 1c4k_A Protein (ornithine deca 94.7 0.0004 1.4E-08 58.1 -6.9 51 1-55 78-129 (730)
18 3tfu_A Adenosylmethionine-8-am 94.5 0.018 6.3E-07 44.6 2.5 35 54-92 71-110 (457)
19 3i4j_A Aminotransferase, class 94.5 0.023 7.9E-07 42.8 3.0 32 58-91 29-63 (430)
20 3nra_A Aspartate aminotransfer 94.4 0.025 8.4E-07 41.8 3.0 29 59-88 40-68 (407)
21 4adb_A Succinylornithine trans 94.4 0.022 7.6E-07 42.1 2.7 30 58-89 39-71 (406)
22 4a6r_A Omega transaminase; tra 94.3 0.027 9.2E-07 43.2 3.1 33 58-92 50-85 (459)
23 2epj_A Glutamate-1-semialdehyd 94.1 0.046 1.6E-06 41.3 3.9 31 58-91 56-89 (434)
24 2pb2_A Acetylornithine/succiny 94.0 0.026 8.9E-07 42.8 2.5 33 58-92 57-92 (420)
25 3ei9_A LL-diaminopimelate amin 94.0 0.052 1.8E-06 40.7 4.1 34 58-93 56-89 (432)
26 2oat_A Ornithine aminotransfer 93.5 0.055 1.9E-06 41.4 3.4 34 58-92 76-111 (439)
27 3dod_A Adenosylmethionine-8-am 93.4 0.054 1.9E-06 41.3 3.2 32 58-91 44-78 (448)
28 1ohv_A 4-aminobutyrate aminotr 93.3 0.013 4.3E-07 45.7 -0.4 30 58-89 63-95 (472)
29 3k28_A Glutamate-1-semialdehyd 93.3 0.054 1.8E-06 40.9 3.1 31 58-90 53-86 (429)
30 2cy8_A D-phgat, D-phenylglycin 93.0 0.078 2.7E-06 40.3 3.6 29 58-88 57-88 (453)
31 3l44_A Glutamate-1-semialdehyd 92.9 0.073 2.5E-06 40.1 3.3 29 58-88 55-86 (434)
32 2eo5_A 419AA long hypothetical 92.2 0.13 4.5E-06 38.7 3.9 32 58-90 42-76 (419)
33 1z7d_A Ornithine aminotransfer 92.2 0.068 2.3E-06 40.8 2.3 33 58-91 65-99 (433)
34 4ffc_A 4-aminobutyrate aminotr 91.7 0.13 4.5E-06 39.5 3.4 31 58-90 64-97 (453)
35 2yky_A Beta-transaminase; tran 90.7 0.036 1.2E-06 43.8 0.0 32 58-92 100-134 (465)
36 1vef_A Acetylornithine/acetyl- 90.9 0.14 5E-06 37.7 2.9 33 58-92 45-80 (395)
37 3fq8_A Glutamate-1-semialdehyd 90.7 0.14 4.8E-06 38.4 2.6 30 58-89 52-84 (427)
38 1sff_A 4-aminobutyrate aminotr 90.5 0.088 3E-06 39.2 1.4 33 58-92 41-76 (426)
39 1s0a_A Adenosylmethionine-8-am 90.3 0.21 7.2E-06 37.4 3.3 32 58-91 43-77 (429)
40 3ruy_A Ornithine aminotransfer 89.7 0.13 4.4E-06 37.9 1.7 33 58-93 36-72 (392)
41 3a8u_X Omega-amino acid--pyruv 87.9 0.16 5.3E-06 38.5 1.1 31 58-90 50-83 (449)
42 4e77_A Glutamate-1-semialdehyd 87.9 0.3 1E-05 36.7 2.7 30 58-89 53-85 (429)
43 3oks_A 4-aminobutyrate transam 86.8 0.4 1.4E-05 36.6 2.9 31 58-90 61-94 (451)
44 1zod_A DGD, 2,2-dialkylglycine 85.9 0.4 1.4E-05 35.8 2.4 31 58-90 43-76 (433)
45 4a0g_A Adenosylmethionine-8-am 84.5 0.27 9.1E-06 41.6 0.9 33 59-92 381-416 (831)
46 3qgu_A LL-diaminopimelate amin 82.6 1.2 4.3E-05 33.3 3.9 31 58-90 69-99 (449)
47 2eh6_A Acoat, acetylornithine 82.5 0.71 2.4E-05 33.5 2.4 33 58-91 28-62 (375)
48 3t18_A Aminotransferase class 73.7 1.5 5.2E-05 32.3 1.9 30 58-88 37-66 (413)
49 4ao9_A Beta-phenylalanine amin 72.0 4 0.00014 32.1 4.1 30 58-89 87-119 (454)
50 4eu1_A Mitochondrial aspartate 71.1 0.88 3E-05 33.7 0.1 27 58-85 41-67 (409)
51 2pyq_A Uncharacterized protein 69.9 3.4 0.00012 27.4 2.8 23 69-92 68-90 (114)
52 2cjg_A L-lysine-epsilon aminot 69.6 2 6.9E-05 32.7 1.9 31 58-90 54-92 (449)
53 2vi8_A Serine hydroxymethyltra 66.7 0.93 3.2E-05 33.1 -0.6 32 58-94 24-56 (405)
54 3kax_A Aminotransferase, class 66.2 7.2 0.00025 27.9 4.2 29 58-88 24-52 (383)
55 3fdb_A Beta C-S lyase, putativ 65.9 4.7 0.00016 28.9 3.1 29 58-88 23-51 (377)
56 1svv_A Threonine aldolase; str 63.6 3.2 0.00011 29.4 1.8 35 58-95 13-47 (359)
57 2a7v_A Serine hydroxymethyltra 61.0 1.9 6.6E-05 34.1 0.3 36 58-98 55-91 (490)
58 3p1t_A Putative histidinol-pho 59.8 6.1 0.00021 27.9 2.7 28 58-88 16-44 (337)
59 3euc_A Histidinol-phosphate am 58.3 11 0.00038 27.0 4.0 29 58-88 30-58 (367)
60 3cq5_A Histidinol-phosphate am 57.3 8.1 0.00028 27.9 3.1 27 61-89 33-59 (369)
61 3hdo_A Histidinol-phosphate am 56.6 7.4 0.00025 28.0 2.7 30 58-89 26-55 (360)
62 3gbx_A Serine hydroxymethyltra 54.7 2.8 9.5E-05 30.6 0.2 33 59-96 32-65 (420)
63 3b1d_A Betac-S lyase; HET: PLP 59.7 2.6 8.9E-05 30.9 0.0 29 58-88 31-59 (392)
64 3ly1_A Putative histidinol-pho 54.2 7.1 0.00024 27.8 2.3 29 58-88 16-44 (354)
65 2dou_A Probable N-succinyldiam 53.4 7.3 0.00025 28.1 2.3 29 58-88 25-53 (376)
66 3jtx_A Aminotransferase; NP_28 53.4 7.8 0.00027 28.1 2.4 28 58-87 30-57 (396)
67 1yaa_A Aspartate aminotransfer 52.7 6.7 0.00023 28.8 2.0 30 58-87 29-62 (412)
68 3ftb_A Histidinol-phosphate am 51.6 6.5 0.00022 28.0 1.7 29 58-89 26-55 (361)
69 4dq6_A Putative pyridoxal phos 51.5 9.7 0.00033 27.3 2.7 29 58-88 32-60 (391)
70 3fkd_A L-threonine-O-3-phospha 51.3 7.8 0.00027 27.7 2.1 28 58-88 15-43 (350)
71 2ay1_A Aroat, aromatic amino a 51.2 13 0.00045 26.8 3.4 30 58-88 26-59 (394)
72 3ele_A Amino transferase; RER0 50.5 13 0.00043 27.0 3.2 29 58-88 35-63 (398)
73 3g0t_A Putative aminotransfera 48.7 13 0.00045 27.2 3.1 29 58-88 44-72 (437)
74 3h14_A Aminotransferase, class 48.2 12 0.00039 27.2 2.7 29 58-88 31-59 (391)
75 2z61_A Probable aspartate amin 47.5 15 0.00052 26.3 3.2 29 58-88 29-57 (370)
76 2q7w_A Aspartate aminotransfer 46.9 14 0.00049 26.6 3.0 30 58-88 26-59 (396)
77 3meb_A Aspartate aminotransfer 46.8 8.8 0.0003 29.0 1.9 29 59-88 50-78 (448)
78 3asa_A LL-diaminopimelate amin 46.3 22 0.00074 26.0 3.9 31 58-90 33-63 (400)
79 1lc5_A COBD, L-threonine-O-3-p 46.3 11 0.00036 27.2 2.2 29 58-88 24-52 (364)
80 4e3q_A Pyruvate transaminase; 45.7 14 0.00049 28.9 3.0 31 58-90 67-100 (473)
81 1o4s_A Aspartate aminotransfer 45.3 22 0.00074 25.9 3.8 30 58-89 41-70 (389)
82 2gb3_A Aspartate aminotransfer 44.4 14 0.00048 27.1 2.6 28 58-88 43-70 (409)
83 1j32_A Aspartate aminotransfer 43.8 19 0.00064 26.0 3.2 29 58-88 30-58 (388)
84 1c7n_A Cystalysin; transferase 43.7 12 0.00042 27.1 2.2 29 58-88 31-59 (399)
85 1ajs_A Aspartate aminotransfer 43.7 12 0.0004 27.4 2.1 29 58-86 30-61 (412)
86 2qma_A Diaminobutyrate-pyruvat 43.7 6.3 0.00022 30.2 0.6 34 58-92 93-126 (497)
87 3ecd_A Serine hydroxymethyltra 42.4 5 0.00017 29.3 -0.1 33 59-96 34-67 (425)
88 3dzz_A Putative pyridoxal 5'-p 41.1 27 0.00091 25.0 3.6 29 58-88 27-55 (391)
89 2o1b_A Aminotransferase, class 40.3 14 0.00048 27.2 2.1 28 58-87 47-74 (404)
90 2x5d_A Probable aminotransfera 39.8 13 0.00045 27.2 1.8 29 58-88 37-65 (412)
91 1xi9_A Putative transaminase; 38.7 26 0.00089 25.5 3.3 30 58-88 38-69 (406)
92 4atq_A 4-aminobutyrate transam 38.5 27 0.00093 27.1 3.6 32 58-91 64-98 (456)
93 7aat_A Aspartate aminotransfer 38.2 14 0.00047 26.9 1.7 29 59-87 29-60 (401)
94 1d2f_A MALY protein; aminotran 36.9 21 0.00071 25.8 2.5 29 58-88 28-56 (390)
95 3e2y_A Kynurenine-oxoglutarate 35.8 25 0.00085 25.4 2.8 29 58-88 23-51 (410)
96 3l8a_A METC, putative aminotra 34.2 47 0.0016 24.3 4.1 29 58-88 61-89 (421)
97 3rq1_A Aminotransferase class 34.0 17 0.00059 26.6 1.7 29 58-87 38-66 (418)
98 3fvs_A Kynurenine--oxoglutarat 32.3 32 0.0011 25.0 2.9 29 58-88 28-56 (422)
99 3get_A Histidinol-phosphate am 32.2 28 0.00097 24.7 2.6 29 58-88 30-58 (365)
100 1lr0_A TOLA protein; domain-sw 31.2 1.1E+02 0.0036 19.8 6.4 64 12-90 29-92 (129)
101 1bw0_A TAT, protein (tyrosine 31.1 38 0.0013 24.6 3.1 30 58-88 33-65 (416)
102 3dyd_A Tyrosine aminotransfera 30.9 59 0.002 24.0 4.2 30 58-88 54-86 (427)
103 2zc0_A Alanine glyoxylate tran 30.7 21 0.00071 25.9 1.6 30 58-89 34-65 (407)
104 3n0l_A Serine hydroxymethyltra 28.2 9.7 0.00033 27.7 -0.6 30 60-94 28-58 (417)
105 3piu_A 1-aminocyclopropane-1-c 26.5 21 0.00073 26.3 1.1 22 69-91 43-64 (435)
106 1b5p_A Protein (aspartate amin 26.4 53 0.0018 23.7 3.2 29 58-88 31-59 (385)
107 1u08_A Hypothetical aminotrans 25.0 53 0.0018 23.5 3.0 29 58-88 30-58 (386)
108 1t3i_A Probable cysteine desul 25.0 88 0.003 22.3 4.2 30 58-90 27-56 (420)
109 1gd9_A Aspartate aminotransfer 23.7 59 0.002 23.2 3.0 29 58-88 26-54 (389)
110 3h7f_A Serine hydroxymethyltra 23.1 15 0.00052 27.6 -0.3 33 60-97 47-81 (447)
111 1yiz_A Kynurenine aminotransfe 23.0 48 0.0016 24.2 2.4 29 58-88 37-65 (429)
112 3b46_A Aminotransferase BNA3; 22.7 48 0.0016 24.7 2.4 30 58-89 57-86 (447)
113 3drx_A BTB/POZ domain-containi 22.5 97 0.0033 22.0 3.8 17 46-68 144-161 (202)
114 3ffh_A Histidinol-phosphate am 20.8 23 0.00079 25.2 0.3 28 58-87 32-59 (363)
No 1
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.18 E-value=3e-06 Score=64.69 Aligned_cols=59 Identities=22% Similarity=0.372 Sum_probs=47.1
Q ss_pred cccCCccc-CCCCCeEEEeecccCCCCceeeecCCcccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCCcCCC
Q psy2211 23 DCFNRPVT-SVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPSG 98 (100)
Q Consensus 23 d~~~r~i~-~~~g~~i~~~~r~~~~~~~~~~~~G~~~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~~srl 98 (100)
.++.+.+. +..|+++.. + | +++|+|+|||||||..+|+ +++++.+++++||.+.+++|.
T Consensus 44 ~r~~~~~~~~~~g~~~~~-~-------------g--~~~id~~~~~~lg~~~~~~-v~~a~~~~~~~~~~~~~~~~~ 103 (427)
T 2w8t_A 44 DPFAIVMEQVKSPTEAVI-R-------------G--KDTILLGTYNYMGMTFDPD-VIAAGKEALEKFGSGTCGSRM 103 (427)
T ss_dssp CTTCCCCSEEEETTEEEE-T-------------T--EEEEECSCCCTTCGGGCHH-HHHHHHHHHHHHCSCCCSCTT
T ss_pred ceeeeeccccCCCceEee-C-------------C--ceEEEEECcccccCCCCHH-HHHHHHHHHHHhCCCCccccc
Confidence 33444555 667777764 3 4 8999999999999999997 999999999999988777654
No 2
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.06 E-value=2.5e-06 Score=64.34 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=35.6
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCCcCC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPS 97 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~~sr 97 (100)
+++|+|+|||||||+.+|+ +++++.+++++||.+.++++
T Consensus 59 ~~~ld~~s~~~l~~~~~p~-v~~a~~~~l~~~~~~~~~~~ 97 (409)
T 3kki_A 59 PDDIILQSNDYLALANHPL-IKARLAKSLLEEQQSLFMSA 97 (409)
T ss_dssp TTSEECCCSCTTCCTTCHH-HHHHHHHHHHSCCCCCCSBG
T ss_pred CceEEeeccCccCCcCCHH-HHHHHHHHHHHcCCCCCccc
Confidence 8999999999999999997 99999999999998776654
No 3
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=98.05 E-value=1.9e-05 Score=58.51 Aligned_cols=64 Identities=23% Similarity=0.282 Sum_probs=50.9
Q ss_pred HhhhhcccCCcccCCCCCeEEEeecccCCCCceeeecCCcccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCCcCC
Q psy2211 18 YRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPS 97 (100)
Q Consensus 18 ~~r~~d~~~r~i~~~~g~~i~~~~r~~~~~~~~~~~~G~~~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~~sr 97 (100)
..+.......++....|.++.. + | +++|+|++|||||+..+|+ +.+++.+++++++.+.++++
T Consensus 19 ~~~~~~~~~~~~~~~~g~~v~~-~-------------g--~~~id~~~~~~~g~~~~~~-v~~a~~~~~~~~~~~~~~~~ 81 (399)
T 3tqx_A 19 KKAGLYKSERIITSPQNAEIKV-G-------------E--KEVLNFCANNYLGLADHPA-LIKTAQTVVEQYGFGMASVR 81 (399)
T ss_dssp HTTTCCCCCCCBCSCSSSEEEE-T-------------T--EEEEECSSCCTTSCTTCHH-HHHHHHHHHHHHCSCCCSCC
T ss_pred HHcCCccccccccCCCCceEee-C-------------C--eeEEEeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcC
Confidence 4444444556678888888875 2 4 8999999999999988886 99999999999998877665
Q ss_pred C
Q psy2211 98 G 98 (100)
Q Consensus 98 l 98 (100)
.
T Consensus 82 ~ 82 (399)
T 3tqx_A 82 F 82 (399)
T ss_dssp C
T ss_pred c
Confidence 3
No 4
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=97.82 E-value=5.6e-05 Score=56.37 Aligned_cols=72 Identities=25% Similarity=0.313 Sum_probs=52.1
Q ss_pred HHHHHHHHH---HhhhhcccCCcccCCCCCeEEEeecccCCCCceeeecCCcccEEEeccccccCCCCCChHHHHHHHHH
Q psy2211 9 FVLFYSRYV---YRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKES 85 (100)
Q Consensus 9 f~~f~~r~~---~~r~~d~~~r~i~~~~g~~i~~~~r~~~~~~~~~~~~G~~~~~lnf~SnnYLGla~~~~~v~~a~~~a 85 (100)
+.+++.+++ .......+...+.+..|.++...+ | +++|+|++||+||+..+|+ +++++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-------------g--~~~id~~~~~~~g~~~~~~-v~~a~~~~ 71 (401)
T 1fc4_A 8 FYQQLTNDLETARAEGLFKEERIITSAQQADITVAD-------------G--SHVINFCANNYLGLANHPD-LIAAAKAG 71 (401)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCCCBCSCSSSEEEBTT-------------S--CEEEECCCSCTTSCTTCHH-HHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCeeeeeeeccCCCceEEeeC-------------C--ccEEEeeccCcccccCCHH-HHHHHHHH
Confidence 344455554 333334455667788888876422 4 8999999999999877886 99999999
Q ss_pred HHhhCCCCCcC
Q psy2211 86 VKQSGCALCSP 96 (100)
Q Consensus 86 i~~yG~gs~~s 96 (100)
+++||.+++++
T Consensus 72 ~~~~~~~~~~~ 82 (401)
T 1fc4_A 72 MDSHGFGMASV 82 (401)
T ss_dssp HHHHCSCCCSC
T ss_pred HHHhCCCCCCC
Confidence 99999876544
No 5
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.19 E-value=0.0008 Score=49.73 Aligned_cols=55 Identities=22% Similarity=0.339 Sum_probs=42.7
Q ss_pred CCcccCCCCCeEEEeecccCCCCceeeecCCcccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCCcCC
Q psy2211 26 NRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPS 97 (100)
Q Consensus 26 ~r~i~~~~g~~i~~~~r~~~~~~~~~~~~G~~~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~~sr 97 (100)
...+....|.++.. + | +++|+|++|+||||..+|+ +++++.++++++|.+.++++
T Consensus 23 ~~~~~~~~g~~~~~-~-------------g--~~~id~~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~ 77 (384)
T 1bs0_A 23 RYPVAQGAGRWLVA-D-------------D--RQYLNFSSNDYLGLSHHPQ-IIRAWQQGAEQFGIGSGGSG 77 (384)
T ss_dssp CCCCSBCSSSEEEE-T-------------T--EEEEECSCCCTTSGGGCHH-HHHHHHHHHHHHCSCCCSBT
T ss_pred cccccCCCCceEEE-C-------------C--ceEEEeeccCccCCCCCHH-HHHHHHHHHHHhCCCCCCcC
Confidence 33456677777762 2 4 7899999999999988886 99999999999887655444
No 6
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=97.16 E-value=0.00027 Score=52.74 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.3
Q ss_pred CcccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCCcCC
Q psy2211 56 TESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCSPS 97 (100)
Q Consensus 56 ~~~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~~sr 97 (100)
+++++++|++|+|+|++.+|+ +++++.+++++++.++++++
T Consensus 44 ~g~~~i~~~~~~~~~~~~~p~-v~~a~~~~~~~~~~~~~~~~ 84 (401)
T 2bwn_A 44 GKQDITVWCGNDYLGMGQHPV-VLAAMHEALEAVGAGSGGTR 84 (401)
T ss_dssp CEEEEEECSCSCTTSGGGCHH-HHHHHHHHHHHHCSCCCSBT
T ss_pred CCCcEEEeeCCCcccCCCCHH-HHHHHHHHHHHcCCCCCCcC
Confidence 348999999999999999996 99999999999987665443
No 7
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.11 E-value=0.00072 Score=50.34 Aligned_cols=62 Identities=19% Similarity=0.347 Sum_probs=49.0
Q ss_pred HHHhhhhcccCCcccCCCCCeEEEeecccCCCCceeeecCCcccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCC
Q psy2211 16 YVYRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSGCALC 94 (100)
Q Consensus 16 ~~~~r~~d~~~r~i~~~~g~~i~~~~r~~~~~~~~~~~~G~~~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~ 94 (100)
.+.++....+..++.+..|.++. .+ | +.+|+|+++++||+..++. +++++.+++++++.+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~~~~-~~-------------g--~~~idl~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~~ 78 (398)
T 3a2b_A 17 ELKAKGLYAYFRPIQSKQDTEVK-ID-------------G--RRVLMFGSNSYLGLTTDTR-IIKAAQDALEKYGTGCA 78 (398)
T ss_dssp HHHHTTCCCSSCCBCSCSSSEEE-ET-------------T--EEEEECSCSCTTCGGGCHH-HHHHHHHHHHHHCSCCC
T ss_pred HHHhcCcccceeeecCCCCceEE-EC-------------C--ceEEEeecccccCCCCCHH-HHHHHHHHHHHcCCCCC
Confidence 34555555666778889999988 33 4 7899999999999988886 99999999998876544
No 8
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=96.18 E-value=0.00065 Score=49.74 Aligned_cols=32 Identities=6% Similarity=-0.120 Sum_probs=27.9
Q ss_pred ccEEE-eccccccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLN-LASYNYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~ln-f~SnnYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++++ |+||||||++.||. +.++..++++++|
T Consensus 3 ~~~~~~~~~~~~l~~~~~p~-~~~~~~~~~~~~~ 35 (357)
T 3lws_A 3 NRLRTSFQQTTGQISGHGKR-NVGVLKTAFAAVA 35 (357)
T ss_dssp CHHHHHHHTCSEESSBSSCC-BHHHHHHHHTTSC
T ss_pred chhhhHHHhhcccccCCCCC-CHHHHHHHHHHhh
Confidence 45666 99999999999997 9999989999876
No 9
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=95.14 E-value=0.012 Score=43.71 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=29.8
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCAL 93 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~gs 93 (100)
+++|||+++ ++||+ .+|+ +++++.+++++++.++
T Consensus 40 ~~~ld~~~~~~~~~lg~-~~~~-v~~a~~~~~~~~~~~~ 76 (397)
T 2ord_A 40 NAYLDFTSGIAVNVLGH-SHPR-LVEAIKDQAEKLIHCS 76 (397)
T ss_dssp CEEEESSHHHHTCTTCB-TCHH-HHHHHHHHHHHCSCCC
T ss_pred CEEEECCccccccccCC-CCHH-HHHHHHHHHHhcccCc
Confidence 889999999 99999 6776 9999999999987643
No 10
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=95.14 E-value=0.011 Score=44.96 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=28.5
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|+|| ++||.+ +|+ |++|+.+++++.+.
T Consensus 49 ~~~lD~~~~~~~~~lG~~-~p~-v~~A~~~~~~~~~~ 83 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGYG-RKE-LAEAAYKQLQTLSY 83 (452)
T ss_dssp CEEEETTHHHHTCTTCBC-CHH-HHHHHHHHHTTCCC
T ss_pred CEEEECCcchhhccCCCC-CHH-HHHHHHHHHHhcCC
Confidence 899999999 999995 776 99999999998765
No 11
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=95.05 E-value=0.02 Score=43.14 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=27.5
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|+|+ ++||+ .+|+ +++++.+.+++ |.
T Consensus 52 ~~~iD~~~~~~~~~lG~-~~p~-v~~a~~~~~~~-~~ 85 (424)
T 2e7u_A 52 NRYLDYVMSWGPLILGH-AHPK-VLARVRETLER-GL 85 (424)
T ss_dssp CEEEESSGGGTTCTTCB-TCHH-HHHHHHHHHHT-CS
T ss_pred CEEEEccccccccccCC-CCHH-HHHHHHHHHHh-CC
Confidence 899999998 79999 7886 99999999987 54
No 12
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=95.01 E-value=0.014 Score=44.03 Aligned_cols=31 Identities=10% Similarity=0.168 Sum_probs=27.9
Q ss_pred ccEEEeccccc---cCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYNY---LGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~SnnY---LGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+||+| ||+ .+|+ +++++.+++++++
T Consensus 43 ~~~lD~~~~~~~~~lG~-~~p~-v~~a~~~~~~~~~ 76 (439)
T 3dxv_A 43 RELIDLSGAWGAASLGY-GHPA-IVAAVSAAAANPA 76 (439)
T ss_dssp CEEEESSTTTTTCTTCB-SCHH-HHHHHHHHHHSCS
T ss_pred CEEEECCCchhhccCCC-CCHH-HHHHHHHHHHhcc
Confidence 89999999999 998 6786 9999999999874
No 13
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=94.92 E-value=0.012 Score=45.90 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=28.8
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCAL 93 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~gs 93 (100)
+++|+|+|| +.||.+ ||+ |++|+.+++++.+..+
T Consensus 55 ~~ylD~~s~~~~~~lGh~-~p~-v~~A~~~~~~~~~~~~ 91 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIGYG-RDE-LAEVAARQMRELPYYN 91 (472)
T ss_dssp CEEECTTHHHHTCTTCBC-CHH-HHHHHHHHHHHCSCCC
T ss_pred CEEEECCCchhhccCCCC-CHH-HHHHHHHHHHhccccc
Confidence 899999998 669986 786 9999999999977443
No 14
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=94.82 E-value=0.019 Score=44.68 Aligned_cols=35 Identities=9% Similarity=0.018 Sum_probs=29.1
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhhCCCCC
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQSGCALC 94 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~yG~gs~ 94 (100)
+++|+|+||. .||.+ +|+ |++|+.+.+++.+.+++
T Consensus 54 ~~ylD~~s~~~~~~lGh~-~p~-v~~A~~~~l~~~~~~~~ 91 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVGYG-RRE-IVDAMAHQAMVLPYASP 91 (476)
T ss_dssp CEEEETTHHHHTCTTCBC-CHH-HHHHHHHHHHHCCCCCT
T ss_pred CEEEECCCchhhccCCCC-CHH-HHHHHHHHHHhccCccc
Confidence 8999999994 48885 776 99999999999776544
No 15
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=94.81 E-value=0.017 Score=42.82 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=28.4
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCAL 93 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~gs 93 (100)
+++|+|+|| ++||. .+|+ +++++.+++++.+.++
T Consensus 36 ~~~lD~~~~~~~~~lG~-~~p~-v~~a~~~~~~~~~~~~ 72 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALGY-NHAK-FNAKIKAQVDKLLHTS 72 (395)
T ss_dssp CEEEESSHHHHTCTTCB-SCHH-HHHHHHHHHTTCSCCC
T ss_pred CEEEECCCcHHhccCCC-CCHH-HHHHHHHHHHhccccc
Confidence 899999999 77887 5676 9999999999876544
No 16
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=94.69 E-value=0.021 Score=43.80 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=28.0
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+++|+|+|| +.||.+ +|+ +++|+.+++++.+..
T Consensus 51 ~~~lD~~~~~~~~~lG~~-~p~-v~~A~~~~~~~~~~~ 86 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYG-RQK-IADAIATQAKNLAYY 86 (460)
T ss_dssp CEEEETTHHHHTCTTCBC-CHH-HHHHHHHHHHHHSCC
T ss_pred CEEEECCcchhhccCCCC-CHH-HHHHHHHHHHhcccc
Confidence 899999998 778874 675 999999999997643
No 17
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=94.67 E-value=0.0004 Score=58.13 Aligned_cols=51 Identities=12% Similarity=0.056 Sum_probs=35.3
Q ss_pred CCCch-hhhHHHHHHHHHHhhhhcccCCcccCCCCCeEEEeecccCCCCceeeecC
Q psy2211 1 GYPDL-YEKFVLFYSRYVYRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTG 55 (100)
Q Consensus 1 ~~~pl-~~~f~~f~~r~~~~r~~d~~~r~i~~~~g~~i~~~~r~~~~~~~~~~~~G 55 (100)
||+|| ++||++||.|+++.+++++|.+ .+.+.++.+.+-..+.++.|..+|
T Consensus 78 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~----~~~pi~~al~~~~~~~~~~~~~Pg 129 (730)
T 1c4k_A 78 HIIDLENKFDATVNAREIETAVNNYEDS----ILPPFFKSLKEYVSRYLIQFDCPG 129 (730)
T ss_dssp EEEECC--CCSTTHHHHHHHHHHHHHHH----HSCHHHHHHHHHHTSCCCCCSSST
T ss_pred eeEecccCCcHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHhcCCcccccCc
Confidence 57899 9999999999999999999966 244454444444455555555555
No 18
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=94.49 E-value=0.018 Score=44.59 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=29.5
Q ss_pred cCCcc--cEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 54 TGTES--TCLNLASY---NYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 54 ~G~~~--~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+| + ++|+|+|+ ++||. .+|+ +++|+.+.+++.+..
T Consensus 71 dG--~~~~ylD~~s~~~~~~lGh-~~p~-v~~A~~~~~~~~~~~ 110 (457)
T 3tfu_A 71 DG--QPIEVLDAMSSWWTAIHGH-GHPA-LDQALTTQLRVMNHV 110 (457)
T ss_dssp TT--EEEEEEETTHHHHTCTTCB-TCHH-HHHHHHHHHHHCSCC
T ss_pred CC--CeeEEEECCCcHhhhccCC-CCHH-HHHHHHHHHHhccCc
Confidence 46 8 99999997 78998 6786 999999999987544
No 19
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=94.47 E-value=0.023 Score=42.78 Aligned_cols=32 Identities=19% Similarity=0.177 Sum_probs=27.9
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|+|| ++||.+ +|+ +++++.+++++.+.
T Consensus 29 ~~~lD~~~~~~~~~lG~~-~p~-v~~a~~~~~~~~~~ 63 (430)
T 3i4j_A 29 RRYLDGSSGALVANIGHG-RAE-VGERMAAQAARLPF 63 (430)
T ss_dssp CEEEETTHHHHTCTTCBC-CHH-HHHHHHHHHHHCCC
T ss_pred CEEEECCCchhccccCCC-CHH-HHHHHHHHHHhccc
Confidence 899999995 999987 776 99999999998653
No 20
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=94.41 E-value=0.025 Score=41.76 Aligned_cols=29 Identities=7% Similarity=0.055 Sum_probs=26.7
Q ss_pred cEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 59 TCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 59 ~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
++|||+|+||++|..+|. +++++.+++++
T Consensus 40 ~~id~~~g~~~~~~~~~~-v~~a~~~~~~~ 68 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPG-AFDLFSAGVQS 68 (407)
T ss_dssp CCEETTSCCTTTSCCCTT-HHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHH-HHHHHHHHHhc
Confidence 599999999999999997 99999999875
No 21
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=94.36 E-value=0.022 Score=42.07 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=27.3
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~y 89 (100)
+++|+|+++ ++||+ .+|+ +++++.++++++
T Consensus 39 ~~~lD~~~~~~~~~lg~-~~p~-v~~a~~~~~~~~ 71 (406)
T 4adb_A 39 KEYIDFAGGIAVNALGH-AHPE-LREALNEQASKF 71 (406)
T ss_dssp CEEEESSHHHHTCTTCB-TCHH-HHHHHHHHHTTC
T ss_pred CEEEECCCchhhcccCC-CCHH-HHHHHHHHHHhc
Confidence 899999999 99999 7786 999999999874
No 22
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=94.31 E-value=0.027 Score=43.22 Aligned_cols=33 Identities=9% Similarity=0.193 Sum_probs=27.9
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+++|+|+|| +.||.+ +|+ |++|+.+++++.+.+
T Consensus 50 ~~ylD~~~~~~~~~lG~~-~p~-v~~A~~~~~~~~~~~ 85 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYG-RKD-FAEAARRQMEELPFY 85 (459)
T ss_dssp CEEEETTHHHHTCTTCBC-CHH-HHHHHHHHHHHCSCC
T ss_pred CEEEECCCchhcccCCCC-CHH-HHHHHHHHHHhcccc
Confidence 899999997 678885 776 999999999987643
No 23
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=94.06 E-value=0.046 Score=41.27 Aligned_cols=31 Identities=19% Similarity=0.292 Sum_probs=27.3
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|+++ ++||+ .+|+ +++++.+.+++ |.
T Consensus 56 ~~~lD~~~~~~~~~lG~-~~~~-v~~a~~~~~~~-~~ 89 (434)
T 2epj_A 56 ARIVDLVLAYGPLILGH-KHPR-VLEAVEEALAR-GW 89 (434)
T ss_dssp CEEEESSGGGTTCTTCB-TCHH-HHHHHHHHHHT-CS
T ss_pred CEEEEcccchhcccCCC-CCHH-HHHHHHHHHHh-CC
Confidence 899999998 79999 7886 99999999987 44
No 24
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=94.05 E-value=0.026 Score=42.79 Aligned_cols=33 Identities=15% Similarity=0.073 Sum_probs=29.2
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+++|+|+++ ++||+ .+|+ +++++.+.+++++.+
T Consensus 57 ~~~lD~~~~~~~~~lG~-~~p~-v~~ai~~~~~~~~~~ 92 (420)
T 2pb2_A 57 KEYIDFAGGIAVTALGH-CHPA-LVEALKSQGETLWHT 92 (420)
T ss_dssp CEEEESSHHHHTCTTCB-TCHH-HHHHHHHHHTTCCCC
T ss_pred CEEEEccccccccccCC-CCHH-HHHHHHHHHHhcccc
Confidence 899999998 99999 6786 999999999987654
No 25
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=94.02 E-value=0.052 Score=40.74 Aligned_cols=34 Identities=6% Similarity=-0.123 Sum_probs=29.7
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSGCAL 93 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs 93 (100)
+++|||+++||+ |..+|. |++++.+++++++.+.
T Consensus 56 ~~~i~l~~~~~~-~~~~~~-v~~a~~~~~~~~~~~~ 89 (432)
T 3ei9_A 56 AQVISLGIGDTT-EPIPEV-ITSAMAKKAHELSTIE 89 (432)
T ss_dssp CCCEECSSCCCC-SCCCHH-HHHHHHHHHHHTTSTT
T ss_pred CCeEEccCCCCC-CCCCHH-HHHHHHHHHhcccccC
Confidence 689999999999 888886 9999999999876543
No 26
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=93.47 E-value=0.055 Score=41.43 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=29.4
Q ss_pred ccEEEecc-ccccCCC-CCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLAS-YNYLGFG-ENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~S-nnYLGla-~~~~~v~~a~~~ai~~yG~g 92 (100)
+++|+|+| ++++.|+ .+|+ +++++.+.+++++.+
T Consensus 76 ~~ylD~~sg~~~~~lgh~~p~-v~~Ai~~~~~~~~~~ 111 (439)
T 2oat_A 76 RKYFDFLSSYSAVNQGHCHPK-IVNALKSQVDKLTLT 111 (439)
T ss_dssp CEEEESSGGGGTTTTCBTCHH-HHHHHHHHHTTCSCC
T ss_pred CEEEEccCCcccccCCCCCHH-HHHHHHHHHHhcCcc
Confidence 89999999 7899999 6775 999999999987643
No 27
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=93.36 E-value=0.054 Score=41.28 Aligned_cols=32 Identities=13% Similarity=0.071 Sum_probs=27.5
Q ss_pred ccEEEecc---ccccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLAS---YNYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~S---nnYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|+| .++||.+ +|+ +++|+.+++++.+.
T Consensus 44 ~~ylD~~~~~~~~~lG~~-~p~-v~~A~~~~~~~~~~ 78 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHR-KKE-LDDAIKKQLGKIAH 78 (448)
T ss_dssp CEEEETTHHHHTCSSCBS-CHH-HHHHHHHHHTTCSC
T ss_pred CEEEECCcchhhccCCCC-CHH-HHHHHHHHHHhccC
Confidence 89999999 5789986 776 99999999988644
No 28
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=93.34 E-value=0.013 Score=45.71 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=24.3
Q ss_pred ccEEEeccccc---cCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASYNY---LGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~SnnY---LGla~~~~~v~~a~~~ai~~y 89 (100)
+++|+|+|++| ||. .||+ |++|+.+++.++
T Consensus 63 ~~ylD~~~g~~~~~lGh-~~p~-v~~A~~~~~~~~ 95 (472)
T 1ohv_A 63 NRMLDLYSQISSIPIGY-SHPA-LVKLVQQPQNVS 95 (472)
T ss_dssp CEEEESSHHHHTCSSCB-TCHH-HHHHHHCGGGHH
T ss_pred CEEEECCCCHhhcccCC-CCHH-HHHHHHHHHhhc
Confidence 89999999988 565 4675 999999987553
No 29
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=93.30 E-value=0.054 Score=40.90 Aligned_cols=31 Identities=13% Similarity=0.107 Sum_probs=25.5
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+||. .||. .+|+ +++|+.+++++..
T Consensus 53 ~~ylD~~~~~~~~~lG~-~~p~-v~~A~~~~~~~~~ 86 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGH-ANDR-VVEALKAVAERGT 86 (429)
T ss_dssp CEEEESCGGGTTCTTCB-SCHH-HHHHHHHHHHHCS
T ss_pred CEEEECCCChhhcccCC-CCHH-HHHHHHHHHhhCc
Confidence 8999999984 5776 5675 9999999998843
No 30
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=93.02 E-value=0.078 Score=40.29 Aligned_cols=29 Identities=14% Similarity=0.164 Sum_probs=26.4
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|+++ ++||+ .+|+ +++++.+.+++
T Consensus 57 ~~~iD~~~~~~~~~lg~-~~~~-v~~a~~~~~~~ 88 (453)
T 2cy8_A 57 NVYLDFFGGHGALVLGH-GHPR-VNAAIAEALSH 88 (453)
T ss_dssp CEEEESCTTTTSCTTCB-TCHH-HHHHHHHHHTT
T ss_pred CEEEECcccHhhcccCC-CCHH-HHHHHHHHHHh
Confidence 889999999 99999 7786 99999999987
No 31
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=92.93 E-value=0.073 Score=40.06 Aligned_cols=29 Identities=7% Similarity=0.095 Sum_probs=24.8
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|+|+ +.||. .+|+ +++|+.+++++
T Consensus 55 ~~ylD~~~~~~~~~lG~-~~p~-v~~a~~~~~~~ 86 (434)
T 3l44_A 55 NKYIDYLAAYGPIITGH-AHPH-ITKAITTAAEN 86 (434)
T ss_dssp CEEEECCGGGTTCSSCB-TCHH-HHHHHHHHHHH
T ss_pred CEEEECCCchhccccCC-CCHH-HHHHHHHHHHh
Confidence 899999998 56777 5775 99999999987
No 32
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=92.22 E-value=0.13 Score=38.70 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=28.3
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~yG 90 (100)
+.+|+|+|+. +||++.+|+ +++|+.+++++++
T Consensus 42 ~~~lD~~~~~~~~~lG~~~~p~-v~~a~~~~~~~~~ 76 (419)
T 2eo5_A 42 NKYLDFTSGIGVNNLGWPSHPE-VIKIGIEQMQKLA 76 (419)
T ss_dssp CEEEESSGGGGTTTTCBSCCHH-HHHHHHHHHTTSC
T ss_pred CEEEEccCChhhhccCCCCCHH-HHHHHHHHHhhCc
Confidence 8899999986 899988887 9999999998864
No 33
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=92.17 E-value=0.068 Score=40.77 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=28.8
Q ss_pred ccEEEecc-ccccCCC-CCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLAS-YNYLGFG-ENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~S-nnYLGla-~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|+| ++++.|+ .+|+ +++|+.+.+++++.
T Consensus 65 ~~ylD~~~g~~~~~lgh~~p~-v~~ai~~~~~~~~~ 99 (433)
T 1z7d_A 65 KRYYDFLSAYSSVNQGHCHPN-ILNAMINQAKNLTI 99 (433)
T ss_dssp CEEEESSHHHHTTTTCBTCHH-HHHHHHHHHTTCSC
T ss_pred CEEEEcccchhhcccCCCCHH-HHHHHHHHHHhCCC
Confidence 89999999 7799999 7775 99999999998654
No 34
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=91.66 E-value=0.13 Score=39.49 Aligned_cols=31 Identities=6% Similarity=0.145 Sum_probs=26.1
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+|| +.||.+ ||+ |++|+.+++++..
T Consensus 64 ~~ylD~~~~~~~~~lGh~-~p~-v~~A~~~~~~~~~ 97 (453)
T 4ffc_A 64 NSFIDLGAGIAVTTVGAS-HPA-VAAAIADQATHFT 97 (453)
T ss_dssp CEEEESSHHHHTCTTCTT-CHH-HHHHHHHHHHHCS
T ss_pred CEEEEcCCCcccCcCCCC-CHH-HHHHHHHHHHhcc
Confidence 899999997 568875 675 9999999998863
No 35
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=90.71 E-value=0.036 Score=43.82 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=26.5
Q ss_pred ccEEEeccccc---cCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASYNY---LGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~SnnY---LGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+++|+|+|+.| ||- .||+ |++|+.+.+++ |++
T Consensus 100 ~~yiD~~~~~~~~~lGh-~~p~-V~~Av~~q~~~-~~~ 134 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFGH-SHPV-IRAAVERALAV-GLN 134 (465)
Confidence 89999999999 673 5776 99999999887 443
No 36
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=90.94 E-value=0.14 Score=37.66 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=28.1
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+.+|+|+++ ++||+ .+|. +++++.+++++++.+
T Consensus 45 ~~~ld~~~~~~~~~~g~-~~~~-v~~a~~~~~~~~~~~ 80 (395)
T 1vef_A 45 NEYIDCVGGYGVANLGH-GNPE-VVEAVKRQAETLMAM 80 (395)
T ss_dssp CEEEESSHHHHTCTTCB-TCHH-HHHHHHHHHHHCCCC
T ss_pred CEEEEccCccccccCCC-CCHH-HHHHHHHHHHhCCCC
Confidence 789999998 78998 5675 999999999987654
No 37
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=90.65 E-value=0.14 Score=38.40 Aligned_cols=30 Identities=10% Similarity=0.176 Sum_probs=25.5
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~y 89 (100)
+++|+|+|+ +.||. .+|+ +++|+.+.+++.
T Consensus 52 ~~~lD~~~~~~~~~lG~-~~p~-v~~a~~~~~~~~ 84 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICGH-AHPE-VIEALKVAMEKG 84 (427)
T ss_dssp CEEEESSGGGTTCTTCB-TCHH-HHHHHHHHHTTC
T ss_pred CEEEECCCchhhhccCC-CCHH-HHHHHHHHHHhC
Confidence 899999998 67887 5675 999999999874
No 38
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=90.48 E-value=0.088 Score=39.16 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=28.3
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
+++|+|+++. +||+ .+|+ +++++.+++++++.+
T Consensus 41 ~~~id~~~~~~~~~lg~-~~~~-v~~a~~~~~~~~~~~ 76 (426)
T 1sff_A 41 REYLDFAGGIAVLNTGH-LHPK-VVAAVEAQLKKLSHT 76 (426)
T ss_dssp CEEEESSHHHHTCTTCB-TCHH-HHHHHHHHTTTCSCC
T ss_pred CEEEEcccChhhcccCC-CCHH-HHHHHHHHHHhCCCc
Confidence 8999999988 8999 6776 999999999887654
No 39
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=90.30 E-value=0.21 Score=37.44 Aligned_cols=32 Identities=9% Similarity=0.096 Sum_probs=27.1
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+.+|+|+++ ++||+ .+|+ +++++.+++++++.
T Consensus 43 ~~ylD~~~~~~~~~lg~-~~p~-v~~a~~~~~~~~~~ 77 (429)
T 1s0a_A 43 RRLVDGMSSWWAAIHGY-NHPQ-LNAAMKSQIDAMSH 77 (429)
T ss_dssp CEEEESSTTTTTCTTCB-SCHH-HHHHHHHHHHHCSC
T ss_pred CEEEEcCccHhhccCCC-CCHH-HHHHHHHHHHhccc
Confidence 889999998 68998 4776 99999999988653
No 40
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=89.70 E-value=0.13 Score=37.87 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=26.6
Q ss_pred ccEEEeccccc----cCCCCCChHHHHHHHHHHHhhCCCC
Q psy2211 58 STCLNLASYNY----LGFGENTGLCTERSKESVKQSGCAL 93 (100)
Q Consensus 58 ~~~lnf~SnnY----LGla~~~~~v~~a~~~ai~~yG~gs 93 (100)
+++|+|+|| | ||+ .+|+ +++++.+.+++++.++
T Consensus 36 ~~~lD~~~~-~~~~~lG~-~~p~-v~~a~~~~~~~~~~~~ 72 (392)
T 3ruy_A 36 NRYMDLLSA-YSAVNQGH-RHPK-IINALIDQANRVTLTS 72 (392)
T ss_dssp CEEEESSHH-HHTCTTCB-TCHH-HHHHHHHHHTTCSCCC
T ss_pred CEEEEcCCC-hhhhccCC-CCHH-HHHHHHHHHHhccccc
Confidence 899999998 6 444 5676 9999999999887654
No 41
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=87.94 E-value=0.16 Score=38.47 Aligned_cols=31 Identities=10% Similarity=-0.045 Sum_probs=26.9
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+|+. +||++ +|+ +++|+.+.+++++
T Consensus 50 ~~~lD~~~~~~~~~lG~~-~~~-v~~a~~~~~~~~~ 83 (449)
T 3a8u_X 50 RKVYDSLSGLWTCGAGHT-RKE-IQEAVAKQLSTLD 83 (449)
T ss_dssp CEEEETTHHHHTCTTCBS-CHH-HHHHHHHHTTTCS
T ss_pred CEEEECCccHhhccCCCC-CHH-HHHHHHHHHHhCC
Confidence 8899998774 89998 786 9999999998875
No 42
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=87.94 E-value=0.3 Score=36.69 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=24.4
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~y 89 (100)
+++|+|+|+- .||.+ +|+ +++|+.+.+++.
T Consensus 53 ~~ylD~~~~~~~~~lG~~-~p~-v~~A~~~~~~~~ 85 (429)
T 4e77_A 53 KAYIDYVGSWGPMILGHN-HPA-IRQAVIEAVERG 85 (429)
T ss_dssp CEEEESSGGGTTCTTCBT-CHH-HHHHHHHHHTTC
T ss_pred CEEEECCCchhccccCCC-CHH-HHHHHHHHHHhC
Confidence 8999999984 46663 675 999999999874
No 43
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=86.84 E-value=0.4 Score=36.64 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=25.3
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+|| +.||.+ ||+ +++|+.+++++..
T Consensus 61 ~~ylD~~~~~~~~~lGh~-~p~-v~~A~~~~~~~~~ 94 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNS-APK-VVEAVRSQVGDFT 94 (451)
T ss_dssp CEEEESSHHHHTCTTCTT-CHH-HHHHHHHHHTTCS
T ss_pred CEEEEcCCCccccccCCC-CHH-HHHHHHHHHHhcc
Confidence 899999997 447864 675 9999999998753
No 44
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=85.86 E-value=0.4 Score=35.83 Aligned_cols=31 Identities=16% Similarity=0.091 Sum_probs=26.1
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+++. +||. .+|+ +++++.+++++++
T Consensus 43 ~~~lD~~~~~~~~~lG~-~~p~-v~~a~~~~~~~~~ 76 (433)
T 1zod_A 43 RAILDFTSGQMSAVLGH-CHPE-IVSVIGEYAGKLD 76 (433)
T ss_dssp CEEEETTHHHHTCTTCB-TCHH-HHHHHHHHHHHCC
T ss_pred CEEEEcccchhccccCC-CCHH-HHHHHHHHHHhCc
Confidence 8899998876 6887 6776 9999999998865
No 45
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=84.51 E-value=0.27 Score=41.63 Aligned_cols=33 Identities=3% Similarity=-0.133 Sum_probs=29.7
Q ss_pred cEEEecc---ccccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 59 TCLNLAS---YNYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 59 ~~lnf~S---nnYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
++|+++| ++.||.+.||+ |++|+.+.+++++..
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~-i~~Ai~~Q~~~l~h~ 416 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAE-LAREMGYTAARFGHV 416 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHH-HHHHHHHHHHHHSSC
T ss_pred heeeecccHhhcCCCCCCCHH-HHHHHHHHHhhcccc
Confidence 8999998 68999988897 999999999999765
No 46
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=82.65 E-value=1.2 Score=33.28 Aligned_cols=31 Identities=3% Similarity=-0.175 Sum_probs=27.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+++ ++++..+|. |++++.+++++++
T Consensus 69 ~~~i~l~~g-~~~~~~~~~-v~~a~~~~~~~~~ 99 (449)
T 3qgu_A 69 AKIISLGIG-DTTEPLPKY-IADAMAKAAAGLA 99 (449)
T ss_dssp CCCEECSSC-CCCCCCCHH-HHHHHHHHHHGGG
T ss_pred CCEEEeeCC-CCCCCCCHH-HHHHHHHHHHhhc
Confidence 789999998 699998886 9999999999754
No 47
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=82.53 E-value=0.71 Score=33.46 Aligned_cols=33 Identities=24% Similarity=0.103 Sum_probs=27.4
Q ss_pred ccEEEeccccc-cCCC-CCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASYNY-LGFG-ENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~SnnY-LGla-~~~~~v~~a~~~ai~~yG~ 91 (100)
+.+|||+++.+ +.|+ .+|. +++++.+++++++.
T Consensus 28 ~~~ld~~~~~~~~~~g~~~~~-v~~a~~~~~~~~~~ 62 (375)
T 2eh6_A 28 KEYLDFVSGIGVNSLGHAYPK-LTEALKEQVEKLLH 62 (375)
T ss_dssp CEEEESSHHHHTCTTCBSCHH-HHHHHHHHHHHCSC
T ss_pred CEEEEcCCcccccccCCCCHH-HHHHHHHHHHhccc
Confidence 89999999987 6777 5675 99999999988753
No 48
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=73.67 E-value=1.5 Score=32.34 Aligned_cols=30 Identities=10% Similarity=-0.016 Sum_probs=21.2
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|||++++|+++..+.. +.+++.+++++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~-~~~~v~~a~~~ 66 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKII-ALPSVYDRLDE 66 (413)
T ss_dssp GGCEECCSCCCBCTTSCBC-CCHHHHHHHHH
T ss_pred cceEeccccCccCCCCCcC-ChHHHHHHHHh
Confidence 6899999999998887753 44444444443
No 49
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=71.98 E-value=4 Score=32.07 Aligned_cols=30 Identities=7% Similarity=0.109 Sum_probs=22.7
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~y 89 (100)
+++|+|.|. .-||- .||+ |++|+++++++.
T Consensus 87 ~~ylD~~~g~~~~~lGH-~hp~-v~~Av~~q~~~~ 119 (454)
T 4ao9_A 87 HRYADFIAEYTAGVYGH-SAPE-IRDAVIEAMQGG 119 (454)
T ss_dssp CEEEESSGGGGTTTTCS-CCHH-HHHHHHHHHHTC
T ss_pred CEEEEccccHHhhcccC-CCHH-HHHHHHHHHhcC
Confidence 999999774 33554 3565 999999999874
No 50
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=71.11 E-value=0.88 Score=33.67 Aligned_cols=27 Identities=19% Similarity=0.063 Sum_probs=24.0
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHH
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKES 85 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~a 85 (100)
..+|||++++||++..++. +.+++.++
T Consensus 41 ~~~i~l~~g~~~d~~~~~~-v~~a~~~a 67 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPF-VLECVKQA 67 (409)
T ss_dssp SSCEECCCSSCCCTTSCCC-CCHHHHTC
T ss_pred cCceeeeeeEEECCCCCEe-ecHHHHhc
Confidence 5789999999999999997 88888876
No 51
>2pyq_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.50A {Jannaschia SP} SCOP: a.279.1.1
Probab=69.89 E-value=3.4 Score=27.38 Aligned_cols=23 Identities=13% Similarity=0.290 Sum_probs=20.3
Q ss_pred cCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 69 LGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 69 LGla~~~~~v~~a~~~ai~~yG~g 92 (100)
|||+.+|+ +.++..+.+++||-|
T Consensus 68 LGl~d~~~-ld~aI~~V~e~mgks 90 (114)
T 2pyq_A 68 LGLADSES-LMGGIQSVIETYGRS 90 (114)
T ss_dssp SCCCSSHH-HHHHHHHHHHHHCTT
T ss_pred cCCCCcHh-HHHHHHHHHHHHhcc
Confidence 79999997 888888899999875
No 52
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=69.64 E-value=2 Score=32.66 Aligned_cols=31 Identities=10% Similarity=0.193 Sum_probs=24.5
Q ss_pred ccEEEeccccc---cCCCCCChHHH-H-HHHH---HHHhhC
Q psy2211 58 STCLNLASYNY---LGFGENTGLCT-E-RSKE---SVKQSG 90 (100)
Q Consensus 58 ~~~lnf~SnnY---LGla~~~~~v~-~-a~~~---ai~~yG 90 (100)
+++|+|+++.+ ||.. +|+ ++ + |+.+ .+++..
T Consensus 54 ~~ylD~~~~~~~~~lG~~-~p~-v~~~~A~~~~~~~~~~~~ 92 (449)
T 2cjg_A 54 RRYLDMFTFVASSALGMN-PPA-LVDDREFHAELMQAALNK 92 (449)
T ss_dssp CEEEESSHHHHTCSSCBS-CHH-HHTCHHHHHHHHHHHTCC
T ss_pred cEEEEccCCccccCCCCC-CHH-HHHHHHHHHHHHHHHhcC
Confidence 89999988865 6664 776 99 8 9999 887754
No 53
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=66.68 E-value=0.93 Score=33.12 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=24.4
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHH-hhCCCCC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVK-QSGCALC 94 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~-~yG~gs~ 94 (100)
+.+++|+++||+ +|+ +++++.+.++ +|+.|.+
T Consensus 24 ~~~~~~~~~~~~----~~~-v~~a~~~~~~~~~~~~~~ 56 (405)
T 2vi8_A 24 AKIELIASENFV----SRA-VMEAQGSVLTNKYAEGYP 56 (405)
T ss_dssp HSEECCTTCCCC----CHH-HHHHHTSGGGGCCCCEET
T ss_pred cceeeccCcccC----CHH-HHHHHHHHhhcccccCCC
Confidence 467889999998 665 9999998885 6665533
No 54
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=66.19 E-value=7.2 Score=27.94 Aligned_cols=29 Identities=7% Similarity=0.077 Sum_probs=25.7
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++ ++|..+|+ +++++.+++++
T Consensus 24 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 52 (383)
T 3kax_A 24 EELIHAWIAD-MDFEVPQP-IQTALKKRIEH 52 (383)
T ss_dssp SCCEECCCSS-CSSCCCHH-HHHHHHHHHHS
T ss_pred CCeeeccccc-CCCCCCHH-HHHHHHHHHhc
Confidence 7899999997 88888886 99999999876
No 55
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=65.95 E-value=4.7 Score=28.94 Aligned_cols=29 Identities=14% Similarity=0.148 Sum_probs=25.2
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++ ..+..+|+ +++++.+++++
T Consensus 23 ~~~idl~~~~-~~~~~~~~-v~~a~~~~~~~ 51 (377)
T 3fdb_A 23 QGVLPLWVAE-SDFSTCPA-VLQAITDAVQR 51 (377)
T ss_dssp TTSEECCSSC-CCSCCCHH-HHHHHHHHHHT
T ss_pred CCeeeecccC-CCCCCCHH-HHHHHHHHHHc
Confidence 8999999987 77887886 99999998876
No 56
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=63.62 E-value=3.2 Score=29.45 Aligned_cols=35 Identities=6% Similarity=0.024 Sum_probs=26.1
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhCCCCCc
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSGCALCS 95 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~gs~~ 95 (100)
..+++|.+ |++| ..+++ +++++.+.+++|+.+.+.
T Consensus 13 p~~i~l~~-~~~~-~~~~~-v~~a~~~~~~~~~~~~g~ 47 (359)
T 1svv_A 13 PKPYSFVN-DYSV-GMHPK-ILDLMARDNMTQHAGYGQ 47 (359)
T ss_dssp --CEECSC-SCSS-CCCHH-HHHHHHHHTTCCCCSTTC
T ss_pred CeeEEecC-CCcC-CCCHH-HHHHHHHHHhhccccccc
Confidence 35789998 8888 55665 999999999888765543
No 57
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=61.00 E-value=1.9 Score=34.12 Aligned_cols=36 Identities=11% Similarity=-0.029 Sum_probs=24.2
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHH-HhhCCCCCcCCC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESV-KQSGCALCSPSG 98 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai-~~yG~gs~~srl 98 (100)
..+..++|+||+ +|. |++|....+ .+|+.|..|+|.
T Consensus 55 ~~i~lias~n~~----~~~-V~eA~~~~l~~~y~~G~~g~r~ 91 (490)
T 2a7v_A 55 RGLELIASENFC----SRA-ALEALGSCLNNKYSEGYPGKRY 91 (490)
T ss_dssp HSEECCTTCCCC----CHH-HHHHHTSGGGTCCCCC------
T ss_pred cCceEECCCCCC----CHH-HHHHHHHHHcCCCccCCCcccc
Confidence 347888999996 776 999988875 679888777763
No 58
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=59.83 E-value=6.1 Score=27.87 Aligned_cols=28 Identities=11% Similarity=0.024 Sum_probs=22.6
Q ss_pred ccEEEeccc-cccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASY-NYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~Sn-nYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++| |++|. +|. ++++..+.++.
T Consensus 16 ~~~i~l~~n~~~~~~--~~~-v~~a~~~~~~~ 44 (337)
T 3p1t_A 16 AQAVCLAFNENPEAV--EPR-VQAAIAAAAAR 44 (337)
T ss_dssp CCCEECSSCCCCSCC--CHH-HHHHHHHHGGG
T ss_pred CCceEeeCCCCCCCC--CHH-HHHHHHHhhhh
Confidence 689999999 88885 575 88888887654
No 59
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=58.33 E-value=11 Score=26.96 Aligned_cols=29 Identities=3% Similarity=0.006 Sum_probs=24.6
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++|+ ..+..+|+ +++++.+.+++
T Consensus 30 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 58 (367)
T 3euc_A 30 HGLVKLDAME-NPYRLPPA-LRSELAARLGE 58 (367)
T ss_dssp TTCEECCSSC-CCCCCCHH-HHHHHHHHHHH
T ss_pred CCeeEccCCC-CCCCCCHH-HHHHHHHHhhh
Confidence 6889999988 77777886 99999998875
No 60
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=57.25 E-value=8.1 Score=27.94 Aligned_cols=27 Identities=7% Similarity=0.108 Sum_probs=23.1
Q ss_pred EEeccccccCCCCCChHHHHHHHHHHHhh
Q psy2211 61 LNLASYNYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 61 lnf~SnnYLGla~~~~~v~~a~~~ai~~y 89 (100)
|+|++|++ .|..+|+ +++++.+++++.
T Consensus 33 idl~~~~~-~~~~~~~-v~~a~~~~~~~~ 59 (369)
T 3cq5_A 33 IRLNTNEN-PYPPSEA-LVADLVATVDKI 59 (369)
T ss_dssp EECSSCCC-CSCCCHH-HHHHHHHHHHHH
T ss_pred eeccCCCC-CCCCCHH-HHHHHHHHHHhc
Confidence 99999998 6667786 999999998874
No 61
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=56.62 E-value=7.4 Score=27.99 Aligned_cols=30 Identities=7% Similarity=0.131 Sum_probs=25.4
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~y 89 (100)
+.+|+|++|+. .|..+|+ +++++.+++++.
T Consensus 26 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~~ 55 (360)
T 3hdo_A 26 ASWIKLNTNEN-PYPPSPE-VVKAILEELGPD 55 (360)
T ss_dssp TTSEECSSCCC-SSCCCHH-HHHHHHHHHTTT
T ss_pred cceeeccCCCC-CCCCCHH-HHHHHHHHHhcc
Confidence 78999999987 6777886 999999988763
No 62
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=54.69 E-value=2.8 Score=30.61 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=20.9
Q ss_pred cEEEeccccccCCCCCChHHHHHHHHHH-HhhCCCCCcC
Q psy2211 59 TCLNLASYNYLGFGENTGLCTERSKESV-KQSGCALCSP 96 (100)
Q Consensus 59 ~~lnf~SnnYLGla~~~~~v~~a~~~ai-~~yG~gs~~s 96 (100)
.+.+++|+||+ +|+ +++++.+.+ +.++.|..++
T Consensus 32 ~~~~~~~~n~~----~~~-v~~a~~~~~~~~~~~~~~~~ 65 (420)
T 3gbx_A 32 HIELIASENYT----SPR-VMQAQGSQLTNKYAEGYPGK 65 (420)
T ss_dssp SEECCTTCCCC----CHH-HHHHHTSGGGGCCC------
T ss_pred ceeeeccCCCC----CHH-HHHHHHHHHhcccccCCCCc
Confidence 46678889983 776 999998888 5675555544
No 63
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=59.68 E-value=2.6 Score=30.90 Aligned_cols=29 Identities=10% Similarity=0.020 Sum_probs=24.6
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|+++++ +|..+|+ +++++.+++++
T Consensus 31 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 59 (392)
T 3b1d_A 31 PQLLPAWIADM-DFEVMPE-VKQAIHDYAEQ 59 (392)
Confidence 38999999997 8888886 99999888764
No 64
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=54.20 E-value=7.1 Score=27.80 Aligned_cols=29 Identities=7% Similarity=0.149 Sum_probs=23.9
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++|+ ..+..+|+ +++++.+++++
T Consensus 16 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 44 (354)
T 3ly1_A 16 DNPIRINFNE-NPLGMSPK-AQAAARDAVVK 44 (354)
T ss_dssp SSCEECSSCC-CSSCCCHH-HHHHHHHTGGG
T ss_pred CceEEccCCC-CCCCCCHH-HHHHHHHHHhh
Confidence 7899999986 66777786 99999887764
No 65
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=53.41 E-value=7.3 Score=28.11 Aligned_cols=29 Identities=7% Similarity=0.015 Sum_probs=22.8
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|+++++ .+..+|. +++++.+++++
T Consensus 25 ~~~idl~~~~~-~~~~~~~-v~~a~~~~~~~ 53 (376)
T 2dou_A 25 VGLIDLSIGST-DLPPPEA-PLKALAEALND 53 (376)
T ss_dssp CCCEECSSCCC-CCCCCHH-HHHHHHHHTTC
T ss_pred CCEEeccCCCC-CCCCCHH-HHHHHHHHHhC
Confidence 67899999876 6766775 99998888754
No 66
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=53.39 E-value=7.8 Score=28.05 Aligned_cols=28 Identities=11% Similarity=-0.057 Sum_probs=23.4
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHH
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVK 87 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~ 87 (100)
+++|+|++++ ..+..+|. +++++.+.++
T Consensus 30 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~ 57 (396)
T 3jtx_A 30 MEAVPLHIGE-PKHPTPKV-ITDALTASLH 57 (396)
T ss_dssp CCCEECSCCS-CCSCCCHH-HHHHHHHTGG
T ss_pred CCeEEeCCcC-CCCCCCHH-HHHHHHHHhh
Confidence 7899999998 78887776 8998888764
No 67
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=52.71 E-value=6.7 Score=28.76 Aligned_cols=30 Identities=13% Similarity=-0.004 Sum_probs=21.3
Q ss_pred ccEEEeccccccCCCCCC---hHHHHHHHH-HHH
Q psy2211 58 STCLNLASYNYLGFGENT---GLCTERSKE-SVK 87 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~---~~v~~a~~~-ai~ 87 (100)
+.+|||++++||.++.++ ..++++..+ +++
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~ 62 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND 62 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTC
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcC
Confidence 678999999999886542 336666666 543
No 68
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=51.57 E-value=6.5 Score=28.02 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=21.7
Q ss_pred ccEEEeccc-cccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASY-NYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~Sn-nYLGla~~~~~v~~a~~~ai~~y 89 (100)
+++|+|++| |.++. +|+ +++++.++++++
T Consensus 26 ~~~idl~~~~~~~~~--~~~-v~~a~~~~~~~~ 55 (361)
T 3ftb_A 26 RELLDYSSNINPLGI--PKS-FLNNIDEGIKNL 55 (361)
T ss_dssp --CEETTCCCCTTCS--CHH-HHTTHHHHHHGG
T ss_pred CCEEEecCCCCCCCC--CHH-HHHHHHHHHHHh
Confidence 789999998 77664 675 999999988763
No 69
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=51.46 E-value=9.7 Score=27.33 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=25.0
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++++ +++..+|+ +++++.+++++
T Consensus 32 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 60 (391)
T 4dq6_A 32 NDLLPMWVAD-MDFKAAPC-IIDSLKNRLEQ 60 (391)
T ss_dssp SCSEECCSSS-CSSCCCHH-HHHHHHHHHTT
T ss_pred CCceeccccC-CCCCCCHH-HHHHHHHHHhC
Confidence 6789999998 78888886 99999998875
No 70
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=51.35 E-value=7.8 Score=27.68 Aligned_cols=28 Identities=14% Similarity=0.117 Sum_probs=20.8
Q ss_pred ccEEEeccc-cccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASY-NYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~Sn-nYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++| +.++ .+|+ +++++.+++..
T Consensus 15 ~~~id~~~~~~~~~--~~~~-v~~a~~~~~~~ 43 (350)
T 3fkd_A 15 SEIVNFSTTVWTDG--DKDH-LEKHLVENLNC 43 (350)
T ss_dssp -CCEECSCCSCCCS--CCHH-HHHHHHHTGGG
T ss_pred ccEEEccCCCCCCC--CCHH-HHHHHHHhHhH
Confidence 899999998 4554 5775 99998887743
No 71
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=51.24 E-value=13 Score=26.82 Aligned_cols=30 Identities=7% Similarity=0.015 Sum_probs=22.7
Q ss_pred ccEEEeccccccCCCC----CChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGE----NTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~----~~~~v~~a~~~ai~~ 88 (100)
..+|||++++|+.... ++. ++++..+.+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~-v~~a~~~~~~~ 59 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRA-VHAAEQRMLET 59 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHH-HHHHHHHHHHH
T ss_pred ccccccccceeeCCCCCccCcHH-HHHHHHHhcCC
Confidence 5789999999976543 454 88888887764
No 72
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=50.52 E-value=13 Score=26.97 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=24.2
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|+++ +..+..++. +++++.+++++
T Consensus 35 ~~~i~l~~~-~~~~~~~~~-v~~a~~~~~~~ 63 (398)
T 3ele_A 35 ENVYDFSIG-NPSIPAPQI-VNDTIKELVTD 63 (398)
T ss_dssp GGCEECCSC-CCCSCCCHH-HHHHHHHHHHH
T ss_pred CCeEEeecC-CCCCCCCHH-HHHHHHHHHhc
Confidence 679999987 777777776 99999998876
No 73
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=48.74 E-value=13 Score=27.24 Aligned_cols=29 Identities=7% Similarity=0.005 Sum_probs=24.4
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++|+. .+..+++ +++++.+++++
T Consensus 44 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 72 (437)
T 3g0t_A 44 TKFCRMEMGVP-GLPAPQI-GIETEIQKLRE 72 (437)
T ss_dssp CCCEECCCCSC-CSCCCHH-HHHHHHHHHHH
T ss_pred CCEEeccCcCC-CCCCCHH-HHHHHHHHHhC
Confidence 68999999986 6777776 99999998875
No 74
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=48.20 E-value=12 Score=27.20 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=23.4
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++ ..+..+|+ +++++.+++++
T Consensus 31 ~~~i~l~~g~-~~~~~~~~-v~~a~~~~~~~ 59 (391)
T 3h14_A 31 RRIIHMEVGQ-PGTGAPRG-AVEALAKSLET 59 (391)
T ss_dssp CCCEECCCSS-CSSCSCHH-HHHHHHHHHC-
T ss_pred CCeEEccCCC-CCCCCCHH-HHHHHHHHHhc
Confidence 7899999987 67777776 99999888765
No 75
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=47.52 E-value=15 Score=26.34 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=23.0
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++. .+..++. +++++.+++++
T Consensus 29 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 57 (370)
T 2z61_A 29 KKVIHLEIGEP-DFNTPKP-IVDEGIKSLKE 57 (370)
T ss_dssp CCCEECCCCSC-SSCCCHH-HHHHHHHHHHT
T ss_pred CCEEEccCCCC-CCCCCHH-HHHHHHHHHHc
Confidence 67899999887 6665665 99999998875
No 76
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=46.90 E-value=14 Score=26.60 Aligned_cols=30 Identities=13% Similarity=-0.016 Sum_probs=21.7
Q ss_pred ccEEEeccccccCCCC----CChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGE----NTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~----~~~~v~~a~~~ai~~ 88 (100)
..+|||++++|+.... +| .++++..+.+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~-~v~~a~~~~~~~ 59 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLT-SVKKAEQYLLEN 59 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCH-HHHHHHHHHHHH
T ss_pred CCceecccccccCCCCCccCcH-HHHHHHHhhcCc
Confidence 5789999999987643 35 488888887764
No 77
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=46.80 E-value=8.8 Score=28.98 Aligned_cols=29 Identities=17% Similarity=-0.002 Sum_probs=24.5
Q ss_pred cEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 59 TCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 59 ~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
..|||+..+|+.+..++. +.+++.+++.+
T Consensus 50 ~~i~l~~g~~~d~~~~~~-v~~av~~a~~~ 78 (448)
T 3meb_A 50 KKVNLGVGAYRDESGKPW-ILPAVKEAEAI 78 (448)
T ss_dssp TCEEESSCCCCCTTSCCC-CCHHHHHHHHH
T ss_pred CeEEeecccccCCCCCEe-chHHHHHHHHH
Confidence 479999999999999986 88888888443
No 78
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=46.35 E-value=22 Score=25.97 Aligned_cols=31 Identities=19% Similarity=0.115 Sum_probs=24.8
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|+++++ .+..+|. +++++.+++++.+
T Consensus 33 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~~~ 63 (400)
T 3asa_A 33 HTVINLSIGDT-TQPLNAS-VAEAFASSIARLS 63 (400)
T ss_dssp SCCEECSSCCC-CCCCCHH-HHHHHHHHHHHHT
T ss_pred CceEeccCCCC-CCCCCHH-HHHHHHHHHhccc
Confidence 67899999986 5666775 9999999988753
No 79
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=46.28 E-value=11 Score=27.19 Aligned_cols=29 Identities=7% Similarity=0.070 Sum_probs=22.6
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++ ..+..+++ +++++.+++++
T Consensus 24 ~~~idl~~~~-~~~~~~~~-v~~a~~~~~~~ 52 (364)
T 1lc5_A 24 DQLLDFSANI-NPLGMPVS-VKRALIDNLDC 52 (364)
T ss_dssp GGSEECSSCC-CTTCCCHH-HHHHHHHTGGG
T ss_pred cceEEecccc-CCCCCCHH-HHHHHHHHHHH
Confidence 6899999987 55666775 99998887654
No 80
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=45.66 E-value=14 Score=28.94 Aligned_cols=31 Identities=19% Similarity=0.225 Sum_probs=24.1
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+++|+|.|. +-||-+ ||+ |++|+.+.+++..
T Consensus 67 ~~ylD~~~g~~~~~lGh~-~p~-v~~Ai~~q~~~l~ 100 (473)
T 4e3q_A 67 RRYLDANSGLWNMVAGFD-HKG-LIDAAKAQYERFP 100 (473)
T ss_dssp CEEEETTTTTTTCTTCSC-CHH-HHHHHHHHHHHCC
T ss_pred CEEEEcccCHHHhhccCC-CHH-HHHHHHHHHHhcc
Confidence 999999774 456664 565 9999999999853
No 81
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=45.26 E-value=22 Score=25.85 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=23.1
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~y 89 (100)
+.+|+|++++. .+..++. +++++.+++++.
T Consensus 41 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~~ 70 (389)
T 1o4s_A 41 EDVINLTAGEP-DFPTPEP-VVEEAVRFLQKG 70 (389)
T ss_dssp CCCEECCCSSC-SSCCCHH-HHHHHHHHHTTC
T ss_pred CCEEEccCCCC-CCCCCHH-HHHHHHHHHhcC
Confidence 67899998886 4555665 999999988753
No 82
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=44.44 E-value=14 Score=27.11 Aligned_cols=28 Identities=14% Similarity=-0.105 Sum_probs=22.9
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|+++++ ++..++. +++++ +++++
T Consensus 43 ~~~i~l~~~~~-~~~~~~~-v~~a~-~~l~~ 70 (409)
T 2gb3_A 43 VRIHHLNIGQP-DLKTPEV-FFERI-YENKP 70 (409)
T ss_dssp CEEEECSSCCC-CSCCCTH-HHHHH-HHTCC
T ss_pred CCEEeccCCCC-CCCCCHH-HHHHH-HHHhc
Confidence 68999999998 6767776 99998 88764
No 83
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=43.77 E-value=19 Score=25.96 Aligned_cols=29 Identities=14% Similarity=0.161 Sum_probs=23.0
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++. .+..++. +.+++.+++++
T Consensus 30 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 58 (388)
T 1j32_A 30 IDVCSFSAGEP-DFNTPKH-IVEAAKAALEQ 58 (388)
T ss_dssp CCCEECCCSSC-SSCCCHH-HHHHHHHHHHT
T ss_pred CCEEECCCCCC-CCCCCHH-HHHHHHHHHhc
Confidence 67899999886 5666665 99999988865
No 84
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=43.72 E-value=12 Score=27.07 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=23.8
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++ +++..+|. +.+++.+++++
T Consensus 31 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 59 (399)
T 1c7n_A 31 NEVVPLSVAD-MEFKNPPE-LIEGLKKYLDE 59 (399)
T ss_dssp TTCCCCCSSS-CSSCCCHH-HHHHHHHHHHH
T ss_pred CCceeeeecC-CCCCCCHH-HHHHHHHHHhc
Confidence 4789998876 88887776 99999998865
No 85
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=43.69 E-value=12 Score=27.40 Aligned_cols=29 Identities=10% Similarity=-0.017 Sum_probs=21.3
Q ss_pred ccEEEeccccccCCCCC---ChHHHHHHHHHH
Q psy2211 58 STCLNLASYNYLGFGEN---TGLCTERSKESV 86 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~---~~~v~~a~~~ai 86 (100)
+.+|||++++||....+ +..+.++..+.+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~ 61 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIA 61 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHH
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhh
Confidence 67999999999876533 234777777766
No 86
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=43.65 E-value=6.3 Score=30.22 Aligned_cols=34 Identities=0% Similarity=-0.114 Sum_probs=26.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhCCC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSGCA 92 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG~g 92 (100)
..++++.|++|||+...+. +.+++++++..++.+
T Consensus 93 ~~~~~~~~~~yl~~~~~~~-~~~~v~~~~~~~~~n 126 (497)
T 2qma_A 93 KNAIFTQHPDCIAHLHTPP-LMPAVAAEAMIAALN 126 (497)
T ss_dssp TTSCCTTSTTBCSSSCCCC-BHHHHHHHHHHHHHC
T ss_pred cCCCCCCCCCeeEeCCCCC-cHHHHHHHHHHHhhc
Confidence 3467999999999999986 788877777655443
No 87
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=42.37 E-value=5 Score=29.27 Aligned_cols=33 Identities=9% Similarity=0.013 Sum_probs=21.2
Q ss_pred cEEEeccccccCCCCCChHHHHHHHHHH-HhhCCCCCcC
Q psy2211 59 TCLNLASYNYLGFGENTGLCTERSKESV-KQSGCALCSP 96 (100)
Q Consensus 59 ~~lnf~SnnYLGla~~~~~v~~a~~~ai-~~yG~gs~~s 96 (100)
.+..+++.||+ +|+ +++++.+.+ ++|+.|..++
T Consensus 34 ~i~l~~~~~~~----~~~-v~~a~~~~~~~~~~~~~~~~ 67 (425)
T 3ecd_A 34 QVELIASENIV----SRA-VLDAQGSVLTNKYAEGYPGK 67 (425)
T ss_dssp SEECCTTCCCC----CHH-HHHHHTSGGGSSCTTC----
T ss_pred ceeeecccCCC----CHH-HHHHHhhhhhcccccCCCcc
Confidence 34556778887 775 999999888 5666655443
No 88
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=41.10 E-value=27 Score=24.96 Aligned_cols=29 Identities=14% Similarity=0.079 Sum_probs=24.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++.+ ..+..+|+ +++++.+++++
T Consensus 27 ~~~i~~~~~~-~~~~~~~~-v~~a~~~~~~~ 55 (391)
T 3dzz_A 27 EKELPMWIAE-MDFKIAPE-IMASMEEKLKV 55 (391)
T ss_dssp TTCEECCSSC-CSSCCCHH-HHHHHHHHHTT
T ss_pred CCceeccccC-CCCCCCHH-HHHHHHHHHhc
Confidence 7899999886 67777886 99999998876
No 89
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=40.28 E-value=14 Score=27.17 Aligned_cols=28 Identities=11% Similarity=0.012 Sum_probs=22.3
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHH
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVK 87 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~ 87 (100)
+++|+|+++++ .+..+|. +++++.++++
T Consensus 47 ~~~idl~~g~~-~~~~~~~-v~~a~~~~~~ 74 (404)
T 2o1b_A 47 LPLINMAVGIP-DGPTPQG-IIDHFQKALT 74 (404)
T ss_dssp SCCEECCCCSC-SSCCCHH-HHHHHHHHTT
T ss_pred CCEEecCCcCC-CCCCCHH-HHHHHHHHHh
Confidence 67999999887 5666775 9999888764
No 90
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=39.80 E-value=13 Score=27.24 Aligned_cols=29 Identities=10% Similarity=-0.013 Sum_probs=21.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++ ..+..+|. +++++.+++++
T Consensus 37 ~~~idl~~g~-~~~~~~~~-v~~a~~~~~~~ 65 (412)
T 2x5d_A 37 EDIIDLSMGN-PDGPTPPH-IVEKLCTVAQR 65 (412)
T ss_dssp CCCEECSSCC-CCSCCCHH-HHHHHHHTC--
T ss_pred CCEEecCCCC-CCCCCCHH-HHHHHHHHHhC
Confidence 6789999987 46666775 99998887764
No 91
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=38.73 E-value=26 Score=25.54 Aligned_cols=30 Identities=13% Similarity=0.126 Sum_probs=24.4
Q ss_pred ccEEEecccccc--CCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYL--GFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYL--Gla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++++.. .|..++. +++++.+++++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~-v~~a~~~~~~~ 69 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEH-MKEAYCKAIKE 69 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHH-HHHHHHHHHHT
T ss_pred CCEEEecCCCCCcCCCCCCHH-HHHHHHHHHhc
Confidence 678999999885 6666665 99999998875
No 92
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=38.46 E-value=27 Score=27.14 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=24.3
Q ss_pred ccEEEeccc---cccCCCCCChHHHHHHHHHHHhhCC
Q psy2211 58 STCLNLASY---NYLGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 58 ~~~lnf~Sn---nYLGla~~~~~v~~a~~~ai~~yG~ 91 (100)
+++|+|.|. .-||- .||+ |++|+.+.++++.-
T Consensus 64 ~~ylD~~~g~~~~~lGh-~~p~-v~~Ai~~q~~~~~~ 98 (456)
T 4atq_A 64 NSFIDLGSGIAVTSVGA-SDPA-VVAAVQEAAAHFTH 98 (456)
T ss_dssp CEEEESSHHHHTCTTCT-TCHH-HHHHHHHHHHHCSC
T ss_pred CEEEEccccHHHHhcCC-CCHH-HHHHHHHHHhhccC
Confidence 899999774 34664 3565 99999999998653
No 93
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=38.15 E-value=14 Score=26.86 Aligned_cols=29 Identities=10% Similarity=-0.050 Sum_probs=19.3
Q ss_pred cEEEeccccccCCCCCCh---HHHHHHHHHHH
Q psy2211 59 TCLNLASYNYLGFGENTG---LCTERSKESVK 87 (100)
Q Consensus 59 ~~lnf~SnnYLGla~~~~---~v~~a~~~ai~ 87 (100)
.+|||+.++||.....|. .++++..+.++
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~ 60 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAA 60 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHH
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcc
Confidence 479999999988877764 14444444443
No 94
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=36.88 E-value=21 Score=25.77 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=21.8
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+++|+|++++. ++..+|+ +++++.+++++
T Consensus 28 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 56 (390)
T 1d2f_A 28 ADLLPFTISDM-DFATAPC-IIEALNQRLMH 56 (390)
T ss_dssp --CEECCSSSC-SSCCCHH-HHHHHHHHHTT
T ss_pred CCeeEeeecCC-CCCCCHH-HHHHHHHHHhC
Confidence 47899988875 6766776 99999998864
No 95
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=35.84 E-value=25 Score=25.44 Aligned_cols=29 Identities=10% Similarity=-0.001 Sum_probs=24.4
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
..+|+|++++ ..|..++. +++++.+++++
T Consensus 23 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 51 (410)
T 3e2y_A 23 PSVVNLGQGF-PDISPPSY-VKEELSKAAFI 51 (410)
T ss_dssp TTSEECSSCC-CCSCCCHH-HHHHHHHHHTC
T ss_pred CCeEEecCCC-CCCCCCHH-HHHHHHHHHhC
Confidence 5789999998 78888886 99999998864
No 96
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=34.17 E-value=47 Score=24.35 Aligned_cols=29 Identities=10% Similarity=0.025 Sum_probs=24.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++.| ..|..+|+ +++++.+.+++
T Consensus 61 ~~~i~~~~~~-~~~~~~~~-v~~a~~~~~~~ 89 (421)
T 3l8a_A 61 PELLQMWVAD-MDFLPVPE-IKEAIINYGRE 89 (421)
T ss_dssp TTCEECCSSC-CCSCCCHH-HHHHHHHHHHH
T ss_pred CCeeecccCC-CCCCCCHH-HHHHHHHHHhc
Confidence 7899998886 67777886 99999998876
No 97
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=33.98 E-value=17 Score=26.56 Aligned_cols=29 Identities=14% Similarity=-0.123 Sum_probs=19.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHH
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVK 87 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~ 87 (100)
+.+|||+..+|++...+.. +.+++.+++.
T Consensus 38 ~~~i~l~~g~~~~~~~~~~-~~~~v~~a~~ 66 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLV-FLKTVKEEYL 66 (418)
T ss_dssp GGCEECCSSCCBCTTSCBC-CCHHHHHHHH
T ss_pred CCeEECCCCcccCCCCCcc-ccHHHHHHHH
Confidence 5899999999987766653 4444444443
No 98
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=32.27 E-value=32 Score=24.99 Aligned_cols=29 Identities=17% Similarity=0.069 Sum_probs=24.3
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
..+|+|++++ ..+..++. +++++.+++++
T Consensus 28 ~~~i~l~~g~-~~~~~~~~-v~~a~~~~~~~ 56 (422)
T 3fvs_A 28 HDVVNLGQGF-PDFPPPDF-AVEAFQHAVSG 56 (422)
T ss_dssp SCCEECCCSS-CSSCCCHH-HHHHHHHHHHS
T ss_pred CCceEeCCCC-CCCCCCHH-HHHHHHHHHhC
Confidence 5789999988 78877776 99999998875
No 99
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=32.17 E-value=28 Score=24.73 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=22.0
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++|+.. |..+|. +++++.++++.
T Consensus 30 ~~~i~l~~~~~~-~~~~~~-v~~a~~~~~~~ 58 (365)
T 3get_A 30 KEVIKLASNENP-FGTPPK-AIECLRQNANK 58 (365)
T ss_dssp SCCEECSSCCCT-TCSCHH-HHHHHHHHGGG
T ss_pred CceEEecCCCCC-CCCCHH-HHHHHHHHHHh
Confidence 679999998443 445775 99999988764
No 100
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=31.20 E-value=1.1e+02 Score=19.76 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=37.5
Q ss_pred HHHHHHHhhhhcccCCcccCCCCCeEEEeecccCCCCceeeecCCcccEEEeccccccCCCCCChHHHHHHHHHHHhhC
Q psy2211 12 FYSRYVYRRIVDCFNRPVTSVPGAIITIKDRETPDYGWTFKYTGTESTCLNLASYNYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 12 f~~r~~~~r~~d~~~r~i~~~~g~~i~~~~r~~~~~~~~~~~~G~~~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG 90 (100)
-|...+..+|+.+|..|-....+..+.|.-+ +.-+|+...+- -+.=++++. +-++|.+++.+.+
T Consensus 29 ~Y~~~i~~~I~~~~~yP~~a~~~~~~~V~v~--------l~~dG~v~~v~------v~~SSG~~~-lD~AAl~AV~ra~ 92 (129)
T 1lr0_A 29 SLDDLIVNLVSQQWRRPPSARNGMSVEVLIE--------MLPDGTITNAS------VSRSSGDKP-FDSSAVAAVRNVG 92 (129)
T ss_dssp HHHHHHHHHHHHHCCCCTTCCTTCCEEEEEE--------ECTTSBEEEEE------EEECCSCHH-HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCChHhcCCCEEEEEEE--------ECCCCCEEEEE------EeeCCCCHH-HHHHHHHHHHHhC
Confidence 4667788899999988876444444443211 11235322221 122244675 8889999998764
No 101
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=31.10 E-value=38 Score=24.59 Aligned_cols=30 Identities=10% Similarity=0.119 Sum_probs=24.5
Q ss_pred ccEEEecccc---ccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYN---YLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~Snn---YLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++++ |+.+..++. +++++.+++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~-v~~a~~~~~~~ 65 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAA-QIKKLKEAIDS 65 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHH-HHHHHHHHHHT
T ss_pred CCeEEecCcCCCcccCCCCCHH-HHHHHHHHhhC
Confidence 5689999988 567877886 99999998875
No 102
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=30.92 E-value=59 Score=23.98 Aligned_cols=30 Identities=13% Similarity=0.184 Sum_probs=24.7
Q ss_pred ccEEEecccccc---CCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYL---GFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYL---Gla~~~~~v~~a~~~ai~~ 88 (100)
+++|||++.++. .+..++. +++++.+.+++
T Consensus 54 ~~~i~l~~g~~~~~g~~~~~~~-v~~a~~~~~~~ 86 (427)
T 3dyd_A 54 KTMISLSIGDPTVFGNLPTDPE-VTQAMKDALDS 86 (427)
T ss_dssp SCCEECCCSCTTTTSSSCCCHH-HHHHHHHHHHH
T ss_pred CCEEeCCCcCCCccCCCCCCHH-HHHHHHHHHhc
Confidence 789999999975 4566675 99999998886
No 103
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=30.70 E-value=21 Score=25.88 Aligned_cols=30 Identities=17% Similarity=0.058 Sum_probs=21.0
Q ss_pred ccEEEecccc--ccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASYN--YLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~Snn--YLGla~~~~~v~~a~~~ai~~y 89 (100)
+.+|+|+++. ..|+ .+++ +++++.+++++.
T Consensus 34 ~~~idl~~g~~~~~~~-~~~~-v~~a~~~~~~~~ 65 (407)
T 2zc0_A 34 VKLISLAAGDPDPELI-PRAV-LGEIAKEVLEKE 65 (407)
T ss_dssp CCCEECCSCCCCTTTS-CHHH-HHHHHHHHHHHC
T ss_pred CceEeCCCCCCCchhC-CHHH-HHHHHHHHHhhc
Confidence 5789997764 3333 3454 899999988873
No 104
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=28.25 E-value=9.7 Score=27.67 Aligned_cols=30 Identities=13% Similarity=-0.041 Sum_probs=20.0
Q ss_pred EEEeccccccCCCCCChHHHHHHHHHH-HhhCCCCC
Q psy2211 60 CLNLASYNYLGFGENTGLCTERSKESV-KQSGCALC 94 (100)
Q Consensus 60 ~lnf~SnnYLGla~~~~~v~~a~~~ai-~~yG~gs~ 94 (100)
+..++|+||+ +|+ +++++.+.+ +.|+.|..
T Consensus 28 i~l~~~~~~~----~~~-v~~a~~~~~~~~~~~~~~ 58 (417)
T 3n0l_A 28 LEMIASENFT----LPE-VMEVMGSILTNKYAEGYP 58 (417)
T ss_dssp EECCTTCCCC----CHH-HHHHHTBGGGGCCCCEET
T ss_pred eeeecccCCC----CHH-HHHHHhhhhhccccccCC
Confidence 3445778886 665 888888877 55655444
No 105
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=26.50 E-value=21 Score=26.33 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=17.3
Q ss_pred cCCCCCChHHHHHHHHHHHhhCC
Q psy2211 69 LGFGENTGLCTERSKESVKQSGC 91 (100)
Q Consensus 69 LGla~~~~~v~~a~~~ai~~yG~ 91 (100)
||++.++- +.+++.+++++++.
T Consensus 43 lg~~~~~~-~~~~~~~~~~~~~~ 64 (435)
T 3piu_A 43 MGLAENQL-CFDLLESWLAKNPE 64 (435)
T ss_dssp CSSCCCCS-SHHHHHHHHHHCTT
T ss_pred eccccccc-cHHHHHHHHHhCcc
Confidence 56688886 78888888888765
No 106
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=26.45 E-value=53 Score=23.71 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=20.7
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++|+. .+...+. +.+++.+++++
T Consensus 31 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 59 (385)
T 1b5p_A 31 VDLVALTAGEP-DFDTPEH-VKEAARRALAQ 59 (385)
T ss_dssp CCCEECCCSSC-SSCCCHH-HHHHHHHHHHT
T ss_pred CCEEEecCCCC-CCCCCHH-HHHHHHHHHhc
Confidence 56788888876 4555564 88888887764
No 107
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=25.04 E-value=53 Score=23.53 Aligned_cols=29 Identities=24% Similarity=0.157 Sum_probs=22.7
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
..+|+|++++. .+..++. +++++.+++++
T Consensus 30 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 58 (386)
T 1u08_A 30 HQAINLSQGFP-DFDGPRY-LQERLAHHVAQ 58 (386)
T ss_dssp TTCEECCCSSC-SSCCCHH-HHHHHHHHHHT
T ss_pred CCeEEecCCCC-CCCCCHH-HHHHHHHHHHh
Confidence 45899999876 5666675 99999998875
No 108
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=25.01 E-value=88 Score=22.33 Aligned_cols=30 Identities=7% Similarity=0.010 Sum_probs=23.3
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhhC
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQSG 90 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~yG 90 (100)
+.+++|+++++ + ..++. +++++.+++++++
T Consensus 27 ~~~i~l~~~~~-~-~~~~~-v~~a~~~~~~~~~ 56 (420)
T 1t3i_A 27 HPLVYLDNAAT-S-QKPRA-VLEKLMHYYENDN 56 (420)
T ss_dssp EECEECBTTTC-C-CCCHH-HHHHHHHHHHHTC
T ss_pred CceEEecCCcc-C-CCCHH-HHHHHHHHHHhcc
Confidence 67899998887 3 34554 9999999998864
No 109
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=23.71 E-value=59 Score=23.22 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=21.3
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
+.+|+|++++ ..+..++. +.+++.+++++
T Consensus 26 ~~~i~l~~~~-~~~~~~~~-v~~a~~~~~~~ 54 (389)
T 1gd9_A 26 KDVISLGIGE-PDFDTPQH-IKEYAKEALDK 54 (389)
T ss_dssp SSCEECCCCS-CSSCCCHH-HHHHHHHHHHT
T ss_pred cCeEecCCCC-CCCCCCHH-HHHHHHHHHhC
Confidence 3578888876 45666665 99999888875
No 110
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=23.07 E-value=15 Score=27.61 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=22.3
Q ss_pred EEEe-ccccccCCCCCChHHHHHHHHHHH-hhCCCCCcCC
Q psy2211 60 CLNL-ASYNYLGFGENTGLCTERSKESVK-QSGCALCSPS 97 (100)
Q Consensus 60 ~lnf-~SnnYLGla~~~~~v~~a~~~ai~-~yG~gs~~sr 97 (100)
+|+| +|.||+ +|+ +++++.+++. +|+.|..++|
T Consensus 47 ~i~l~~~~~~~----~~~-v~~a~~~~~~~~~~~g~~~~~ 81 (447)
T 3h7f_A 47 TLEMIASENFV----PRA-VLQAQGSVLTNKYAEGLPGRR 81 (447)
T ss_dssp SEECCTTCCCC----CHH-HHHHHTSGGGGCCCCEETTEE
T ss_pred ceeEecCCCCC----CHH-HHHHHHHHhcCCccccCCccc
Confidence 3444 567775 775 9999888884 7776655544
No 111
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=22.99 E-value=48 Score=24.22 Aligned_cols=29 Identities=10% Similarity=-0.048 Sum_probs=22.9
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQ 88 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~ 88 (100)
..+|+|++++. .+..++. +++++.+++++
T Consensus 37 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~~ 65 (429)
T 1yiz_A 37 YKPLNLGQGFP-DYHAPKY-ALNALAAAANS 65 (429)
T ss_dssp HCCEECCSSSC-SSCCCHH-HHHHHHHHHTC
T ss_pred CCEEEecCCCC-CCCCCHH-HHHHHHHHHhc
Confidence 46899998876 6666675 99999998876
No 112
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=22.68 E-value=48 Score=24.70 Aligned_cols=30 Identities=7% Similarity=0.123 Sum_probs=23.5
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHHhh
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVKQS 89 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~~y 89 (100)
+.+|||++++ ..+..++. +++++.+++++.
T Consensus 57 ~~~i~l~~g~-~~~~~~~~-v~~a~~~~~~~~ 86 (447)
T 3b46_A 57 RELINLGQGF-FSYSPPQF-AIKEAQKALDIP 86 (447)
T ss_dssp SCCEECCCCS-CSSCCCHH-HHHHHHHHTTSG
T ss_pred CCeEEccCCC-CCCCCCHH-HHHHHHHHHhCc
Confidence 6799999875 46776665 999999988763
No 113
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=22.48 E-value=97 Score=21.98 Aligned_cols=17 Identities=41% Similarity=1.036 Sum_probs=8.2
Q ss_pred CCCceeeecCCcccEEEec-cccc
Q psy2211 46 DYGWTFKYTGTESTCLNLA-SYNY 68 (100)
Q Consensus 46 ~~~~~~~~~G~~~~~lnf~-SnnY 68 (100)
..+|.|+ .+||.+ ||||
T Consensus 144 ~d~~~~~------~~~~~~~~~~~ 161 (202)
T 3drx_A 144 SDGWKFE------QLVSIGSSYNY 161 (202)
T ss_dssp CTTCEEE------EEEEC------
T ss_pred ccccChh------heEeccccccC
Confidence 5567654 678888 5776
No 114
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=20.85 E-value=23 Score=25.20 Aligned_cols=28 Identities=14% Similarity=0.128 Sum_probs=20.1
Q ss_pred ccEEEeccccccCCCCCChHHHHHHHHHHH
Q psy2211 58 STCLNLASYNYLGFGENTGLCTERSKESVK 87 (100)
Q Consensus 58 ~~~lnf~SnnYLGla~~~~~v~~a~~~ai~ 87 (100)
+++|+|++|+. .+..+|+ +++++.+.++
T Consensus 32 ~~~i~l~~~~~-~~~~~~~-v~~a~~~~~~ 59 (363)
T 3ffh_A 32 TKITKLSSNEN-PLGTSKK-VAAIQANSSV 59 (363)
T ss_dssp SCCEECSSCSC-TTCCCHH-HHHHHHTCBS
T ss_pred CceEEccCCCC-CCCCCHH-HHHHHHHHHH
Confidence 67899999854 3555675 8888777654
Done!