Query psy2219
Match_columns 75
No_of_seqs 101 out of 687
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 19:14:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d2v_C Myeloperoxidase; heme-p 99.9 2.4E-28 8.3E-33 183.5 5.5 70 2-74 345-414 (466)
2 3q9k_A Lactoperoxidase, LPO; b 99.9 2.3E-28 7.8E-33 188.3 4.8 70 2-74 473-542 (595)
3 1q4g_A Prostaglandin G/H synth 99.9 1.8E-22 6.1E-27 154.2 4.2 69 2-74 453-525 (553)
4 3nt1_A Prostaglandin-endoperox 99.8 1.2E-21 3.9E-26 150.9 3.1 65 2-72 453-523 (587)
5 1dw9_A Cyanate lyase; cyanate 56.7 15 0.0005 23.9 3.9 45 1-48 53-116 (156)
6 2vog_B BCL-2-modifying factor; 56.5 5.9 0.0002 18.6 1.4 13 39-52 12-24 (27)
7 2luh_B Vacuolar protein-sortin 46.8 13 0.00043 20.7 2.0 18 3-20 21-40 (59)
8 2vgp_C Inner centromere protei 38.6 19 0.00065 18.6 1.8 25 3-27 8-32 (43)
9 2gbs_A Hypothetical protein RP 38.0 12 0.00041 24.1 1.2 21 46-66 37-59 (145)
10 3l32_A Phosphoprotein; antipar 36.9 9.8 0.00034 20.0 0.5 10 49-58 18-27 (45)
11 1zce_A Hypothetical protein AT 34.3 15 0.0005 23.9 1.2 21 46-66 38-60 (155)
12 2eve_A Hypothetical protein ps 28.7 20 0.00068 23.4 1.1 21 46-66 35-58 (157)
13 2jtt_C Calcyclin-binding prote 25.3 50 0.0017 16.2 2.0 14 5-18 8-21 (35)
14 2ar1_A Hypothetical protein; s 23.5 28 0.00097 22.9 1.1 16 46-61 53-70 (172)
15 2lxb_A Small glutamine-rich te 23.3 54 0.0018 18.7 2.2 20 5-24 38-58 (74)
16 4gof_A Small glutamine-rich te 21.1 64 0.0022 17.1 2.0 17 5-21 33-50 (52)
17 2gjf_A Designed protein; proca 20.6 65 0.0022 17.4 2.1 22 3-24 19-41 (78)
No 1
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=99.95 E-value=2.4e-28 Score=183.53 Aligned_cols=70 Identities=33% Similarity=0.612 Sum_probs=66.8
Q ss_pred CHHHHHHHHHhhCCCCcchhhhhhhccccCCCCCCChHHHHHHHHHHHHhhcCccccccCCCCCCCCCccccC
Q psy2219 2 AKSTIAKLKSLYKKVDDIDLIVGGIAEVAQDGAIVGPTFRCILAEQFIRTRAGDRFFYDNPGQPSSFTKQLYS 74 (75)
Q Consensus 2 ~~e~~~~L~~lY~~~ddiDL~vG~l~E~~~~g~~~Gpt~~cii~~qf~rlr~gDRf~yen~~~~~~ft~~ql~ 74 (75)
+++++++|+++|++|||||||||+++|++++|+.+||||+|||++||.|||+||||||||+ +.||++||+
T Consensus 345 d~~~~~~L~~lY~~~d~vDL~vG~laE~~~~G~~~Gptf~~ii~~qf~rLr~gDRf~yen~---~~ft~~ql~ 414 (466)
T 1d2v_C 345 NLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENE---GVFSMQQRQ 414 (466)
T ss_dssp CHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTCSSCHHHHHHHHHHHHHHHHTCTTCTTST---TTSCHHHHH
T ss_pred CHHHHHHHHHHhCCccccceeecccccccCCCCCCCHHHHHHHHHHHHHHHhcCcccccCC---CcccchhhH
Confidence 5789999999999999999999999999999999999999999999999999999999975 899999874
No 2
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=99.94 E-value=2.3e-28 Score=188.30 Aligned_cols=70 Identities=41% Similarity=0.731 Sum_probs=66.8
Q ss_pred CHHHHHHHHHhhCCCCcchhhhhhhccccCCCCCCChHHHHHHHHHHHHhhcCccccccCCCCCCCCCccccC
Q psy2219 2 AKSTIAKLKSLYKKVDDIDLIVGGIAEVAQDGAIVGPTFRCILAEQFIRTRAGDRFFYDNPGQPSSFTKQLYS 74 (75)
Q Consensus 2 ~~e~~~~L~~lY~~~ddiDL~vG~l~E~~~~g~~~Gpt~~cii~~qf~rlr~gDRf~yen~~~~~~ft~~ql~ 74 (75)
+++++++|+++|++|||||||||+++|++++|+.+||||+|||++||.|||+||||||||+ +.||++||+
T Consensus 473 ~~~~~~~l~~lY~~~d~iDl~vG~l~E~~~~g~~~Gptf~~ii~~qf~~lr~gDRf~yen~---~~ft~~ql~ 542 (595)
T 3q9k_A 473 NKILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP---GVFTEKQRD 542 (595)
T ss_dssp CHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTBSSCHHHHHHHHHHHHHHHHTCTTCTTSB---TTBCHHHHH
T ss_pred cHHHHHHHHHHhCCccccceeecccccccCCCCCcCHHHHHHHHHHHHHHHhcCCCeecCC---CcCCHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999986 899999974
No 3
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=99.85 E-value=1.8e-22 Score=154.19 Aligned_cols=69 Identities=19% Similarity=0.266 Sum_probs=63.2
Q ss_pred CHHHHHHHHHhhCCCCcchhhhhhhccccCCCCCCChHHHHHHHH-HHHHhh---cCccccccCCCCCCCCCccccC
Q psy2219 2 AKSTIAKLKSLYKKVDDIDLIVGGIAEVAQDGAIVGPTFRCILAE-QFIRTR---AGDRFFYDNPGQPSSFTKQLYS 74 (75)
Q Consensus 2 ~~e~~~~L~~lY~~~ddiDL~vG~l~E~~~~g~~~Gpt~~cii~~-qf~rlr---~gDRf~yen~~~~~~ft~~ql~ 74 (75)
+++++++|+++|++|||||||||+++|++++|+++||||.|||++ ||+|++ .|||||| | |+.||++|+.
T Consensus 453 d~~~~~~L~~lY~~~ddiDL~vG~laE~~~~G~~~Gpt~~~ii~~~~~~~l~~~~~~d~~~~-~---~~~ft~~ql~ 525 (553)
T 1q4g_A 453 EKEMAAELEELYGDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYW-K---ASTFGGEVGF 525 (553)
T ss_dssp SSHHHHHHHHHHSSGGGCCHHHHHHHSCBCTTCSSBHHHHHHHHHHHHHHHHTSGGGSTTTC-S---GGGGTSHHHH
T ss_pred CHHHHHHHHHHhcChhhccccccccccccCCCCCccHHHHHHHHHHHHHHHhhCcCCCcccc-C---CCCcCHHHHH
Confidence 468999999999999999999999999999999999999999998 799997 5999888 3 4799999873
No 4
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=99.83 E-value=1.2e-21 Score=150.94 Aligned_cols=65 Identities=26% Similarity=0.428 Sum_probs=59.2
Q ss_pred CHHHHHHHHHhhCCCCcchhhhhhhccccCCCCCCChHHHHHHHHHH------HHhhcCccccccCCCCCCCCCccc
Q psy2219 2 AKSTIAKLKSLYKKVDDIDLIVGGIAEVAQDGAIVGPTFRCILAEQF------IRTRAGDRFFYDNPGQPSSFTKQL 72 (75)
Q Consensus 2 ~~e~~~~L~~lY~~~ddiDL~vG~l~E~~~~g~~~Gpt~~cii~~qf------~rlr~gDRf~yen~~~~~~ft~~q 72 (75)
+++++++|+++|++|||||||||+++|++++|+++||||.|| +.|| .++|+|||||+ |+.||.+|
T Consensus 453 ~~~~~~~L~~lY~~~ddIDL~vGglaE~~~pG~~vGpTf~ci-~~qf~l~~~~~~~r~gDrfw~-----~~~Ft~~q 523 (587)
T 3nt1_A 453 EKEMAAELKALYSDIDVMELYPALLVEKPRPDAIFGETMVEL-GAPFSLKGLMGNPICSPQYWK-----PSTFGGEV 523 (587)
T ss_dssp SSHHHHHHHHHHSSGGGCCHHHHHHHSCCSTTCSSCHHHHHH-HHHHHHHHHHTSGGGSTTTSS-----GGGGTSHH
T ss_pred CHHHHHHHHHHhCCHhheeeecccccccCCCCccHHHHHHHH-HHHHHHHHHhcCcccCCcccC-----cCccChHH
Confidence 468999999999999999999999999999999999999999 6674 78999999993 37898877
No 5
>1dw9_A Cyanate lyase; cyanate degradation, structural genomics, PSI, protei structure initiative, midwest center for structural genomic; HET: SO4; 1.65A {Escherichia coli} SCOP: a.35.1.4 d.72.1.1 PDB: 1dwk_A* 2ivq_A 2ivb_A 2iu7_A 2iv1_A 2iuo_A 2ivg_A
Probab=56.68 E-value=15 Score=23.91 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhhCCCCcchhhhhhhccccCCCCC-------------------CChHHHHHHHHHH
Q psy2219 1 MAKSTIAKLKSLYKKVDDIDLIVGGIAEVAQDGAI-------------------VGPTFRCILAEQF 48 (75)
Q Consensus 1 ~~~e~~~~L~~lY~~~ddiDL~vG~l~E~~~~g~~-------------------~Gpt~~cii~~qf 48 (75)
++.+.+++|.++++-+++. +..+.+-|..|+. .|+++..+|-++|
T Consensus 53 ls~e~A~kLa~~LgL~~e~---~~~l~~~P~rg~~~~~~ptdP~iYR~yE~v~vYG~~~K~li~E~F 116 (156)
T 1dw9_A 53 LPADAARLVGAKLDLDEDS---ILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKF 116 (156)
T ss_dssp CCHHHHHHHHHHTTCCHHH---HHHTTSBCCCCCCSSSSCCSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCcCHHH---HHHHhcCCcCCCCCCCCCCCCeehhHHHHHHHhhHHHHHHHHHHc
Confidence 4678999999999854442 5566777877754 3666777777765
No 6
>2vog_B BCL-2-modifying factor; protein-protein complex, BH3, apoptosis, Pro-surviVal; 1.9A {Mus musculus}
Probab=56.45 E-value=5.9 Score=18.63 Aligned_cols=13 Identities=38% Similarity=0.884 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHhh
Q psy2219 39 TFRCILAEQFIRTR 52 (75)
Q Consensus 39 t~~cii~~qf~rlr 52 (75)
.+.| |++||.|++
T Consensus 12 KLQc-I~DQFHR~h 24 (27)
T 2vog_B 12 KLQC-IADQFHRLH 24 (27)
T ss_dssp HHHH-HHHHHHHHH
T ss_pred HHHH-HHHHHHHHH
Confidence 3444 689999986
No 7
>2luh_B Vacuolar protein-sorting-associated protein 60; VTA1, VPS60, ESCRT, MVB, novel MIT recognition mode, protein transport, endocytosis; NMR {Saccharomyces cerevisiae}
Probab=46.78 E-value=13 Score=20.66 Aligned_cols=18 Identities=17% Similarity=0.060 Sum_probs=14.8
Q ss_pred HHHHHHHHHhhCCCC--cch
Q psy2219 3 KSTIAKLKSLYKKVD--DID 20 (75)
Q Consensus 3 ~e~~~~L~~lY~~~d--diD 20 (75)
+|+.+.|.+.|+.|+ +||
T Consensus 21 nEIQE~L~rsy~~pe~DdiD 40 (59)
T 2luh_B 21 DELQEVLAMNNNSGELDDIS 40 (59)
T ss_dssp HHHHHHHHHHHTTCCGGGTT
T ss_pred HHHHHHHhccCCCCccccCC
Confidence 588999999999884 665
No 8
>2vgp_C Inner centromere protein A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD6; 1.7A {Xenopus laevis} PDB: 2bfy_C* 2bfx_C* 2vrx_C* 2vgo_C* 3ztx_C*
Probab=38.60 E-value=19 Score=18.57 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhCCCCcchhhhhhhc
Q psy2219 3 KSTIAKLKSLYKKVDDIDLIVGGIA 27 (75)
Q Consensus 3 ~e~~~~L~~lY~~~ddiDL~vG~l~ 27 (75)
+.+.+.|++.|-++-|+|-+.|-+.
T Consensus 8 ~~L~~~l~~Q~~~p~D~d~iFG~I~ 32 (43)
T 2vgp_C 8 NLLTQAIRQQYYKPIDVDRMYGTID 32 (43)
T ss_dssp HHHHHHHHHHHHSCCCHHHHTTTSC
T ss_pred HHHHHHHHHHHccCCCHHHHcCCCC
Confidence 3567888888866668999988765
No 9
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=37.96 E-value=12 Score=24.07 Aligned_cols=21 Identities=29% Similarity=0.597 Sum_probs=12.4
Q ss_pred HHHHH-hhcCcc-ccccCCCCCC
Q psy2219 46 EQFIR-TRAGDR-FFYDNPGQPS 66 (75)
Q Consensus 46 ~qf~r-lr~gDR-f~yen~~~~~ 66 (75)
..|.| .+.||+ |||-....|+
T Consensus 37 rn~mr~Mk~GD~~ffYHS~~~~g 59 (145)
T 2gbs_A 37 KLHMVAMRRGDRAFYYHSNEGKE 59 (145)
T ss_dssp HHHHHHCCTTCEEEEEETTTTCE
T ss_pred HHHHHhcCCCCEEEEEEeCCCCc
Confidence 34444 899999 5554323443
No 10
>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus}
Probab=36.91 E-value=9.8 Score=19.99 Aligned_cols=10 Identities=40% Similarity=0.909 Sum_probs=8.7
Q ss_pred HHhhcCcccc
Q psy2219 49 IRTRAGDRFF 58 (75)
Q Consensus 49 ~rlr~gDRf~ 58 (75)
+++|.|+|||
T Consensus 18 rkmKtGe~Ff 27 (45)
T 3l32_A 18 RQMRSGERFL 27 (45)
T ss_dssp HHHTTTCCHH
T ss_pred HHHHccccHH
Confidence 5889999996
No 11
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=34.26 E-value=15 Score=23.91 Aligned_cols=21 Identities=29% Similarity=0.621 Sum_probs=12.5
Q ss_pred HHHHH-hhcCcc-ccccCCCCCC
Q psy2219 46 EQFIR-TRAGDR-FFYDNPGQPS 66 (75)
Q Consensus 46 ~qf~r-lr~gDR-f~yen~~~~~ 66 (75)
..|.| .+.||+ |||-....|+
T Consensus 38 rN~mr~Mk~GD~~fFYHS~~~~g 60 (155)
T 1zce_A 38 RNNMRAMKIGDKGFFYHSNEGLD 60 (155)
T ss_dssp HHHHHTCCTTCEEEEEETTTTCE
T ss_pred HHHHHhccCCCEEEEEEeCCCCc
Confidence 44555 899999 5554223443
No 12
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=28.72 E-value=20 Score=23.36 Aligned_cols=21 Identities=38% Similarity=0.915 Sum_probs=12.6
Q ss_pred HHHHH-hhcCcc-ccccCC-CCCC
Q psy2219 46 EQFIR-TRAGDR-FFYDNP-GQPS 66 (75)
Q Consensus 46 ~qf~r-lr~gDR-f~yen~-~~~~ 66 (75)
..|.| .+.||+ |||... ..|+
T Consensus 35 rN~mr~Mk~GD~~ffYHS~c~~pg 58 (157)
T 2eve_A 35 RNFLRTMAEGDEFFFYHSSCPEPG 58 (157)
T ss_dssp HHHHHHCCTTCEEEEEECSSSSCE
T ss_pred HHHHHhcCCCCEEEEEecCCCCCE
Confidence 34444 899999 666533 2444
No 13
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=25.31 E-value=50 Score=16.19 Aligned_cols=14 Identities=36% Similarity=0.593 Sum_probs=10.8
Q ss_pred HHHHHHHhhCCCCc
Q psy2219 5 TIAKLKSLYKKVDD 18 (75)
Q Consensus 5 ~~~~L~~lY~~~dd 18 (75)
+-+.++++|.+.||
T Consensus 8 l~~~fk~iY~~gdd 21 (35)
T 2jtt_C 8 LMNVLKKIYEDGDD 21 (35)
T ss_dssp HHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhcCCH
Confidence 56788999986654
No 14
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=23.46 E-value=28 Score=22.93 Aligned_cols=16 Identities=25% Similarity=0.652 Sum_probs=10.5
Q ss_pred HHHH-HhhcCcc-ccccC
Q psy2219 46 EQFI-RTRAGDR-FFYDN 61 (75)
Q Consensus 46 ~qf~-rlr~gDR-f~yen 61 (75)
..|. ..+.||+ |||-.
T Consensus 53 RN~mr~Mk~GD~vfFYHS 70 (172)
T 2ar1_A 53 RNNMRAMSVGDKVLFYHS 70 (172)
T ss_dssp HHHHHHCCTTCEEEEEEC
T ss_pred HHHHHhcCCCCEEEEEec
Confidence 3444 4899999 55543
No 15
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=23.29 E-value=54 Score=18.70 Aligned_cols=20 Identities=10% Similarity=0.320 Sum_probs=17.1
Q ss_pred HHHHHHHhhC-CCCcchhhhh
Q psy2219 5 TIAKLKSLYK-KVDDIDLIVG 24 (75)
Q Consensus 5 ~~~~L~~lY~-~~ddiDL~vG 24 (75)
.+++|+..|+ +++|.++-+|
T Consensus 38 AiqCI~~aF~v~~~d~~~~v~ 58 (74)
T 2lxb_A 38 AMDCISEAFGFEREAVSGILG 58 (74)
T ss_dssp HHHHHHHHHTCCTTTHHHHHT
T ss_pred HHHHHHHHhCCCchhhHHHHH
Confidence 4799999999 9999887774
No 16
>4gof_A Small glutamine-rich tetratricopeptide repeat-CON protein alpha; four-helix bundle, protein-protein interaction, UBL4A ubiqui domain; 1.35A {Homo sapiens} PDB: 4goe_A 4god_A
Probab=21.06 E-value=64 Score=17.14 Aligned_cols=17 Identities=35% Similarity=0.567 Sum_probs=13.7
Q ss_pred HHHHHHHhhC-CCCcchh
Q psy2219 5 TIAKLKSLYK-KVDDIDL 21 (75)
Q Consensus 5 ~~~~L~~lY~-~~ddiDL 21 (75)
.+++|+..|+ +++|.+|
T Consensus 33 AiqCi~~aF~v~~~d~~l 50 (52)
T 4gof_A 33 AIQCLETAFGVTVEDSDL 50 (52)
T ss_dssp HHHHHHHHHTCCSSCCTT
T ss_pred HHHHHHHHcCCCcccccc
Confidence 4789999999 8888665
No 17
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=20.62 E-value=65 Score=17.37 Aligned_cols=22 Identities=23% Similarity=0.184 Sum_probs=16.6
Q ss_pred HHHHHHHHHhhCC-CCcchhhhh
Q psy2219 3 KSTIAKLKSLYKK-VDDIDLIVG 24 (75)
Q Consensus 3 ~e~~~~L~~lY~~-~ddiDL~vG 24 (75)
.+.++.|+++... ...+|+|-.
T Consensus 19 ~~q~~~L~~L~~~~~~~ldfW~~ 41 (78)
T 2gjf_A 19 EEQVAFLEALAKQDELNFDWQNP 41 (78)
T ss_dssp HHHHHHHHHHHTCTTTCCEESSC
T ss_pred HHHHHHHHHHHhcCCCCEEeeCC
Confidence 4567888888775 677999964
Done!