BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy222
(225 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193631809|ref|XP_001951817.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Acyrthosiphon pisum]
Length = 300
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 116/168 (69%), Gaps = 1/168 (0%)
Query: 42 VKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYK-PHTSSTDPTRTLFIGRLNK 100
VK WYP I YD I+AGSIDGTD PHD I RAL S YK + + +P T+F+GRL+
Sbjct: 15 VKCWYPKAIVYDAIKAGSIDGTDIEPHDAGITRALNSNYKISYKAKGNPLNTIFVGRLSL 74
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
++ E DLE F YGK+I++R+V+D +TG SKRY F+EY+ K L + + S
Sbjct: 75 DTTEKDLENEFCRYGKMIALRLVKDLITGLSKRYAFIEYETFKMALNTYVLCKKLVLKNS 134
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
++ VDFECGR+LPGWKPRRLGGG+GG + SGQLRFGGR + + P+ L
Sbjct: 135 QVFVDFECGRLLPGWKPRRLGGGFGGEKQSGQLRFGGRVRCFRPPLNL 182
>gi|321460332|gb|EFX71375.1| hypothetical protein DAPPUDRAFT_308886 [Daphnia pulex]
Length = 240
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 43 KYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLNKN 101
K W PY Y+PI+ GS DG D PHD AI+RA + Y P H + +P TLFIGRL+KN
Sbjct: 6 KRWSPYAEHYNPIEVGSKDGKDIEPHDNAIVRACNALYHPNHLLTNNPQTTLFIGRLDKN 65
Query: 102 SREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSE 161
E DLE F +YGK+ +V VVRD VTG+SKRYGF+E+ + C A L++ +G +
Sbjct: 66 VTEKDLEDVFIKYGKLKNVTVVRDVVTGYSKRYGFVEFKNKHDCHEARSELHQTVLKGKK 125
Query: 162 IIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
I+V+FEC LPGW PRRLGGG+GG + SGQLRFG ++PW +PVQ+
Sbjct: 126 ILVEFECQHTLPGWIPRRLGGGFGGKKESGQLRFGCLDRPWKRPVQV 172
>gi|449279308|gb|EMC86943.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Columba
livia]
Length = 254
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ T DP TLF+ RLN +
Sbjct: 4 WAPIAKEYDPLKAGSIDGTDEEPHDRAIWRAMLARYVPNKGVTGDPHLTLFVARLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++AF+ YG + +R+VRD VTG SK Y F+EY E+A L A R NR EI
Sbjct: 64 EEKLKEAFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
VDFE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L N
Sbjct: 124 VDFELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINLPN 170
>gi|395529739|ref|XP_003766966.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Sarcophilus harrisii]
Length = 283
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+R+ Y P+ S DP TLF+GRLN +
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEEPHDRAIWRAIRARYVPNKGVSGDPYLTLFVGRLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L+ F+ YG + +R+VRD VTG SKRY F+EY E++ L A R N EI
Sbjct: 64 EEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYREEQSLLKAYRDANGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E RVL GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERVLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|50756329|ref|XP_415114.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Gallus gallus]
Length = 263
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ T DP TLF+ RLN +
Sbjct: 4 WAPIAKEYDPLKAGSIDGTDEEPHDRAIWRAMLARYVPNKGVTGDPHLTLFVARLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R NR E+
Sbjct: 64 EEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVIDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
VDFE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L N
Sbjct: 124 VDFELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINLPN 170
>gi|326929594|ref|XP_003210944.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Meleagris gallopavo]
Length = 265
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN +
Sbjct: 4 WAPIAKEYDPLKAGSIDGTDEEPHDRAVWRAMLARYVPNKGVTGDPHLTLFVARLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R NR E+
Sbjct: 64 EEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVVDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
VDFE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L N
Sbjct: 124 VDFELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINLPN 170
>gi|350536563|ref|NP_001232485.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128442|gb|ACH44940.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128443|gb|ACH44941.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128444|gb|ACH44942.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128445|gb|ACH44943.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
Length = 265
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 110/167 (65%), Gaps = 1/167 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ DP TLF+ RLN +
Sbjct: 4 WAPIAKEYDPLKAGSIDGTDEEPHDRAIWRAMLARYVPNKGVMGDPHLTLFVARLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R NR EI
Sbjct: 64 EEKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
VDFE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L N
Sbjct: 124 VDFELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINLPN 170
>gi|126324312|ref|XP_001375255.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Monodelphis domestica]
Length = 261
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ S DP TLF+GRLN +
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEEPHDRAIWRAMLARYVPNKGVSGDPHLTLFVGRLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L+ F+ YG + +R+VRD VTG SKRY F+EY E++ L A R N EI
Sbjct: 64 EEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYKEERSLLKAYRDANGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R+L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERILKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|224161968|ref|XP_002188436.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Taeniopygia guttata]
Length = 265
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 47 PYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSREA 105
P YDP++AGSIDGTD PHDRAI RA+ + Y P+ T DP TLF+ RLN + E
Sbjct: 6 PIAKEYDPLKAGSIDGTDEEPHDRAIWRAMMARYVPNKGVTGDPHLTLFVARLNLQTTEE 65
Query: 106 DLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVD 165
L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R NR EI VD
Sbjct: 66 KLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVIDQHEIFVD 125
Query: 166 FECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
FE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L N
Sbjct: 126 FELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINLPN 170
>gi|322798651|gb|EFZ20255.1| hypothetical protein SINV_12300 [Solenopsis invicta]
Length = 178
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLNKNSR 103
W PY YDP++AGSIDGTDT PHD+AI RAL Y+P H + P RTLF+ RL
Sbjct: 7 WSPYAKEYDPLKAGSIDGTDTQPHDKAISRALLMHYEPPHNLESKPERTLFVARLGPKVT 66
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
+ DL++ F++YG+VIS +V+ D VTG S+ YGF+E E A+R +G +I
Sbjct: 67 KYDLKELFSKYGEVISAKVIVDVVTGLSQGYGFVEMKSEDEARRALRRTIDATLKGYKIF 126
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
VD+ECGR L GWKPRRLGGG+GG + SGQLRFGG+++P+ +P+
Sbjct: 127 VDYECGRTLKGWKPRRLGGGFGGKKESGQLRFGGKDRPFKRPI 169
>gi|241671842|ref|XP_002411425.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
gi|215504074|gb|EEC13568.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
Length = 278
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 2/167 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P TYDP++AGSIDGTD PHD ++RAL +TYKP TDP TLF+GRLN +
Sbjct: 7 WLPIPRTYDPLKAGSIDGTDVKPHDHGVVRALEATYKPSKYIKTDPKLTLFVGRLNPTTS 66
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L + FA YG+V S R+VRD +TG SK Y F+EY + LAA A N++ I
Sbjct: 67 EERLREFFAHYGEVRSCRLVRDIITGFSKCYAFVEYYELRDALAANDA-NQEYIDDYRIF 125
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
VDFE RVLPGW PRRLGGG+GG + SGQLRFGGR++P+ KP+ + N
Sbjct: 126 VDFERERVLPGWVPRRLGGGFGGKKESGQLRFGGRDRPFKKPIVVNN 172
>gi|328776197|ref|XP_623573.2| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Apis mellifera]
Length = 206
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Query: 41 TVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYK-PHTSSTDPTRTLFIGRLN 99
T++ W P+ YDP++AGSIDGTDT PHD+AI RA+++ Y+ PH + P RTLF+ R
Sbjct: 4 TLQNWSPFAKEYDPLKAGSIDGTDTEPHDKAISRAIQAHYESPHGLKSKPERTLFVARFG 63
Query: 100 KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQG 159
+ DL++ F++YG+VIS +V+ D VTG S+ YGF+E E +R +G
Sbjct: 64 PKITKHDLKEFFSKYGEVISAKVIVDIVTGLSQGYGFVEMRSEDEARRVLRRCVDTTLKG 123
Query: 160 SEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+I +D+ECGR L GWKPRRLGGG+GG + SGQLRFGGR++P+ KP+
Sbjct: 124 YQIFIDYECGRTLKGWKPRRLGGGFGGKKESGQLRFGGRDRPFKKPI 170
>gi|380011282|ref|XP_003689739.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Apis florea]
Length = 207
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 41 TVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYK-PHTSSTDPTRTLFIGRLN 99
T++ W P+ YDP++AGSIDGTDT PHD+AI RA+++ Y+ PH + P RTLF+ R
Sbjct: 6 TLQNWSPFAKEYDPLKAGSIDGTDTEPHDKAISRAMQAHYESPHGLKSKPERTLFVARFG 65
Query: 100 KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQG 159
+ DL++ F++YG+VIS +V+ D VTG S YGF+E E +R +G
Sbjct: 66 PKITKHDLKEFFSKYGEVISAKVIVDIVTGLSHGYGFVEMRSEDEAKRVLRRCVDATLKG 125
Query: 160 SEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+I +D+ECGR L GWKPRRLGGG+GG + SGQLRFGGR++P+ KP+
Sbjct: 126 YQIFIDYECGRTLKGWKPRRLGGGFGGKKESGQLRFGGRDRPFKKPI 172
>gi|327276115|ref|XP_003222816.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Anolis carolinensis]
Length = 260
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ S DP TLF+ RLN +
Sbjct: 4 WAPIAKEYDPLKAGSIDGTDEEPHDRAVWRAMLARYVPNKGVSGDPHLTLFVARLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R NR EI
Sbjct: 64 EDKLKEVFSRYGDIRKIRLVRDLVTGFSKGYAFVEYKEERALIKAHRDANRLVIDQREIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|218847772|ref|NP_001136383.1| small nuclear ribonucleoprotein 35kDa (U11/U12) [Xenopus (Silurana)
tropicalis]
gi|195539787|gb|AAI67878.1| Unknown (protein for MGC:135224) [Xenopus (Silurana) tropicalis]
Length = 264
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+LRA+ + Y P+ DP TL++ RL++ +
Sbjct: 4 WTPIAKDYDPLKAGSIDGTDEEPHDRAVLRAILARYVPNKGVIGDPHLTLYVARLSQQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRDF+TG SK Y F+EY E A + A R N+ EI
Sbjct: 64 EEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIEYKQENAIMKAHRDANKLVIDQREIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFELERNLKGWVPRRLGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|383852521|ref|XP_003701775.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Megachile rotundata]
Length = 186
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 118/175 (67%), Gaps = 1/175 (0%)
Query: 33 DAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTR 91
D +++ ++ W PY YDP++AGSIDGTDT PHD+AI RA+++ Y+P + + P R
Sbjct: 3 DIDATATDILQNWSPYAKEYDPLKAGSIDGTDTEPHDKAISRAIQAHYEPPYGLKSKPER 62
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLF+ R + DL++ F YG VIS +V+ D VTG ++ YGF+E E A+R
Sbjct: 63 TLFVARFGPKVTKHDLKEFFCRYGDVISAKVIVDIVTGLTQGYGFVEMRSEDEARRAVRR 122
Query: 152 LNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+G +I VD+ECGR++ GWKPRRLGGG+GG + SGQLRFGGR++P+ KP+
Sbjct: 123 SVDATLKGHKIFVDYECGRLMKGWKPRRLGGGFGGKKESGQLRFGGRDRPFKKPI 177
>gi|149605642|ref|XP_001519834.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ornithorhynchus anatinus]
Length = 275
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ T DP TLF+GRLN +
Sbjct: 4 WMPIAKDYDPLKAGSIDGTDEEPHDRAIWRAMLARYIPNKGVTGDPHLTLFVGRLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R N EI
Sbjct: 64 EEKLKETFSRYGDIRKLRLVRDLVTGFSKGYAFIEYKEERSLLKAYRDANGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|395513787|ref|XP_003761104.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Sarcophilus harrisii]
Length = 263
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PH RAI RA+ + Y P+ S DP TLF+GRLN +
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEEPHXRAIWRAMLARYVPNKGVSGDPHLTLFVGRLNLQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L+ F+ YG + +R+VRD VTG SKRY F+EY E++ L A R N EI
Sbjct: 64 EEKLKDVFSRYGDIRKLRLVRDVVTGFSKRYAFIEYREERSLLKAYRDANGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R+L GW PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERILKGWIPRRLGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|156387741|ref|XP_001634361.1| predicted protein [Nematostella vectensis]
gi|156221443|gb|EDO42298.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
Query: 41 TVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLN 99
T W P Y P+QAGSIDGTD +PHD A+ RA+++ YKP+ + D TLFIGRL+
Sbjct: 3 TFHNWTPLAKKYHPLQAGSIDGTDQVPHDNAVWRAMQAKYKPNKQVAGDAGCTLFIGRLS 62
Query: 100 KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQG 159
K +R L +AF++YG+V + R+VRDFVTG S+ Y F+E+ A R +++ G
Sbjct: 63 KETRAETLVEAFSKYGEVENCRLVRDFVTGFSRGYAFVEFKERWDAKTAYREISKCCIDG 122
Query: 160 SEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNE 211
EI+V+FE GR L GW PRRLGGG+GG + SGQLRFGGR++P+ +P L ++
Sbjct: 123 QEILVEFEAGRNLEGWIPRRLGGGFGGKKESGQLRFGGRDRPFRRPFDLRHD 174
>gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 115/180 (63%), Gaps = 5/180 (2%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ YKP+ DP TLF+ RLN +
Sbjct: 4 WSPIAKVYDPLKAGSIDGTDVEPHDRAVWRAMGVRYKPNKGVVGDPLLTLFVSRLNPQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L + F++YG + +R+VRD VTG SKRY F+EY E++ + A R N+ E+
Sbjct: 64 EDKLYEVFSKYGDIRRLRLVRDIVTGFSKRYAFVEYKEERSVVRARRDANKIVVDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ----LMNERELGEWRK 219
VDFE R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ LM ER G + K
Sbjct: 124 VDFEQERTLKGWVPRRLGGGHGGKKESGQLRFGGRDRPFRKPINLGLGLMQERVGGGFHK 183
>gi|392876104|gb|AFM86884.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P Y P++AGSIDGTD PHDRA+ RA+ + Y+P+ S DP TLF+ RLN +
Sbjct: 5 WTPIAQHYAPLKAGSIDGTDAEPHDRAVSRAIAANYRPNKGVSGDPHLTLFVARLNPQTT 64
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L F+ +G V +R+VRD VTG SK YGF+EY E++ + A R N+ E+
Sbjct: 65 EQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREERSLVKAHRDANKLLVDQHELF 124
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE RVL GW PRR GGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 125 VDFELERVLKGWMPRRFGGGLGGKKESGQLRFGGRDRPFRKPIHL 169
>gi|410915752|ref|XP_003971351.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Takifugu rubripes]
Length = 223
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 111/173 (64%), Gaps = 5/173 (2%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ YKP+ D TLF+ RLN +
Sbjct: 4 WSPIAKVYDPLKAGSIDGTDVEPHDRAVWRAIGVRYKPNKGVVGDALLTLFVSRLNPQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L + F++YG + +R+VRD VTG SKRY F+EY E++ + A R N+ E+
Sbjct: 64 EEKLYEVFSKYGDIRRLRLVRDIVTGFSKRYAFVEYKEERSVVRARRDANKIVVDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ----LMNER 212
VDFE R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ LM ER
Sbjct: 124 VDFEQERTLKGWVPRRLGGGHGGKKESGQLRFGGRDRPFRKPINLGVGLMQER 176
>gi|387914692|gb|AFK10955.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P Y P++AGSIDGTD PHDRA+ RA+ + Y+P+ S DP TLF+ RLN +
Sbjct: 5 WTPIAQHYAPLKAGSIDGTDAEPHDRAVSRAIAANYRPNKGVSGDPHLTLFVARLNPQTT 64
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L F+ +G V +R+VRD VTG SK YGF+EY E++ + A R N+ E+
Sbjct: 65 EQKLRDTFSRFGDVRRLRLVRDLVTGFSKCYGFIEYREERSLVKAHRDANKLLVDQHELF 124
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE RVL GW PRR GGG GG + SGQLR GGR++P+ KP+ L
Sbjct: 125 VDFELERVLKGWMPRRFGGGLGGKKESGQLRLGGRDRPFRKPIHL 169
>gi|307168935|gb|EFN61821.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Camponotus
floridanus]
Length = 175
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLNKNSR 103
W PY Y+P++AGSIDGTDT PHD+AI RA+ Y+P H + RTLF+ R N
Sbjct: 4 WSPYAKDYNPLKAGSIDGTDTEPHDKAISRAMLMHYEPPHNLESKSERTLFVARFGSNVT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
+ DL++ F+++G VIS +V+ D VTG S+ YGF+E E +R +G ++
Sbjct: 64 KYDLKEFFSKHGDVISAKVIVDVVTGLSQGYGFVEMRNEDEARRVLRRTTDAMLKGYKVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+D+ECGR + GWKPRRLGGG+GG + SGQLRFGGR++P+ +P+
Sbjct: 124 IDYECGRSMKGWKPRRLGGGFGGKKESGQLRFGGRDRPFKRPI 166
>gi|332019065|gb|EGI59597.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Acromyrmex
echinatior]
Length = 194
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLNKNSR 103
W PY YDP++AGSIDGTDT PHD+A+ RA+ Y+P H + RT+F+ RL
Sbjct: 23 WSPYAREYDPLKAGSIDGTDTQPHDKAVSRAMIMHYEPPHDLESKAERTIFVARLGPKIT 82
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
DL++ F++YG VIS +V+ D +TG S+ YGF+E E+ +R +G +I
Sbjct: 83 NYDLKEFFSKYGDVISAKVIVDVITGVSQGYGFVEMKSEEEARRVLRRTVDATLKGYKIF 142
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+D+ECGR L GWKPRRLGGG+GG + SGQLRFGG+++P+ +P+
Sbjct: 143 IDYECGRSLKGWKPRRLGGGFGGKKESGQLRFGGKDRPFKRPI 185
>gi|307193351|gb|EFN76213.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Harpegnathos saltator]
Length = 185
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 1/167 (0%)
Query: 41 TVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLN 99
++ W PY YDP++AGSIDGTD PHDRA+ RA+ Y+P H + RTLF+ R
Sbjct: 5 ILQKWSPYAKEYDPLKAGSIDGTDIEPHDRAVSRAMMRHYEPPHDLESKSERTLFVARFG 64
Query: 100 KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQG 159
+ DL + F YG VIS +V+ D VTG S+ YGF+E E+ R +G
Sbjct: 65 PKINKNDLIEFFNRYGDVISAKVIVDVVTGLSQGYGFVEMRSEEDVKRVFRRAIDVTLKG 124
Query: 160 SEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+I +D ECGR + GWKPRRLGGG+GG + SGQLRFGG+++P+ +P+
Sbjct: 125 YQIFIDRECGRTMKGWKPRRLGGGFGGKKESGQLRFGGKDRPFKRPI 171
>gi|91086635|ref|XP_966565.1| PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum]
gi|270009757|gb|EFA06205.1| hypothetical protein TcasGA2_TC009054 [Tribolium castaneum]
Length = 194
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTD-PTRTLFIGRLNKNSR 103
W + YDPI+ GSIDGTDT PHD+ I+RAL S Y P+ P T+F+ RL+ +
Sbjct: 9 WSRFAKYYDPIKIGSIDGTDTEPHDKGIVRALNSEYHPNRHVKGRPECTIFVSRLSLKTT 68
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
+ ++ F++YG + R+V+D VTG K Y F+EY+ E A N+ N G+ I
Sbjct: 69 KDTIKDIFSKYGPLRRFRLVKDIVTGMPKGYAFIEYENELDAEEAYCKANKMNIDGNIIF 128
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFEC R+L GW+PRRLGGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 129 VDFECERLLKGWRPRRLGGGFGGKKESGQLRFGGRDRPFKKPISL 173
>gi|346465439|gb|AEO32564.1| hypothetical protein [Amblyomma maculatum]
Length = 327
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 2/165 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P +YDP++AGSIDGTD PHD I+RA+ +TYK TDP T+F+ RL+ +
Sbjct: 52 WSPIARSYDPLKAGSIDGTDVKPHDHGIVRAMEATYKTSKHVKTDPRVTVFVARLSPATN 111
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E + + +YG + + +VRD VTG SKRY F+E+ K LAA A N+ +I
Sbjct: 112 EDTIREXXXQYGDIKNCHLVRDVVTGFSKRYAFIEFYDTKDALAACGA-NQLAIDDCKIF 170
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE RVLPGW PRRLGGG+GG + SGQLRFGG ++P+ KP+ L
Sbjct: 171 VDFEQERVLPGWIPRRLGGGFGGKKESGQLRFGGLDRPFRKPIVL 215
>gi|147903467|ref|NP_001090410.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Xenopus
laevis]
gi|123905237|sp|Q05AT9.1|U1SBP_XENLA RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|116063426|gb|AAI23362.1| MGC154877 protein [Xenopus laevis]
Length = 272
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+LRA+ S Y P+ T DP TLF+ RL+ +
Sbjct: 4 WTPIAKKYDPLKAGSIDGTDEEPHDRAVLRAMLSRYVPNKGVTGDPHLTLFVSRLSPQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRDF+TG SK Y F+EY E A + A R N+ E+
Sbjct: 64 EEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIEYKQENAIMKAHRDANKLVIDQREVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE R L GW PRR GGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFELERNLKGWIPRRFGGGFGGKKESGQLRFGGRDRPFRKPINL 168
>gi|71834616|ref|NP_001025412.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Danio
rerio]
gi|123916690|sp|Q4KMD3.1|U1SBP_DANRE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|68533621|gb|AAH98619.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Danio rerio]
Length = 208
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 109/169 (64%), Gaps = 1/169 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHD + RA+ + YKP+ DP TLF+ RLN +
Sbjct: 3 WSPVAKVYDPLKAGSIDGTDVEPHDAGVWRAMLARYKPNRGVCGDPDLTLFVARLNPQTT 62
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L F+++G + +R+VRD VTG SKRY F+EY E++ A R N+ E++
Sbjct: 63 EEKLRDVFSKFGDIRRLRLVRDVVTGFSKRYAFIEYKEERSLKRAWRDANKLILDQYELL 122
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNER 212
VD E R LPGW+PRRLGGG GG + SGQLRFGGR++P+ KP+ L R
Sbjct: 123 VDVEQERTLPGWRPRRLGGGQGGQKESGQLRFGGRDRPFRKPINLSTRR 171
>gi|356567272|ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
Length = 347
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRA-------LRSTYKPHTSSTDPTRTLFIGRLNK 100
Y +Y PIQAGSIDGTD +PHD A+ RA L + ++ DP TLF+ RL++
Sbjct: 13 YADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGDPYCTLFVARLSR 72
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ E DL + ++YG+V ++R+VRD VTG S+ Y F+EY+ E+ A + S
Sbjct: 73 LTTEDDLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDS 132
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
EIIVD+ +++PGW PRRLGGG G + SGQLRFGGR KP+ P++ + EL
Sbjct: 133 EIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKPIPYEEL 186
>gi|350398824|ref|XP_003485315.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Bombus impatiens]
Length = 207
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLNKNSR 103
W PY Y+P++AGSIDGTDT PHD+AI RA+++ Y+P H + P RTLF+ R
Sbjct: 8 WSPYAKKYEPLKAGSIDGTDTEPHDKAISRAMQAHYEPPHGLKSKPERTLFVARFGPKIT 67
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
+ DL++ F+ YG+V+S +V+ D VTG S+ YGF+E E IR +G +I
Sbjct: 68 KHDLKEFFSRYGEVVSAKVIVDVVTGLSQGYGFIEMRNEDEARRVIRRCVDATLKGYQIF 127
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+D+ECGR L GWKPRRLGGG+GG + SGQLRFGGR++P+ KP+
Sbjct: 128 IDYECGRTLHGWKPRRLGGGFGGKKGSGQLRFGGRDRPFKKPI 170
>gi|225433837|ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera]
gi|297743756|emb|CBI36639.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPHTSST---DPTRTLFIGRLNK 100
Y +Y PIQAGSIDGTDT+PHD A+ RAL + Y P DP T+F+G LN
Sbjct: 11 YAESYHPIQAGSIDGTDTLPHDNAVYRALLCSSAGLYDPFGDPKVIGDPYCTVFVGHLNH 70
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ E L +A +++G+V S+R+VR VTG S+ Y F+EY+ E+ A +
Sbjct: 71 LTTEDTLHKAMSKFGRVKSLRLVRHIVTGASQGYAFVEYETEREMRRAYEDAHHSMIDDC 130
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPW---VKPVQLMNERELG 215
EIIVD+ +++PGW PRRLGGG GG + SGQLRFGGR +P+ ++P+ L + + LG
Sbjct: 131 EIIVDYNRQQLMPGWIPRRLGGGIGGKKESGQLRFGGRERPFRAPLRPIPLDDLKRLG 188
>gi|357508099|ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
gi|355499353|gb|AES80556.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
Length = 566
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPH---TSSTDPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD +PHD AI RA + Y P ++ DP TLF+GRL++
Sbjct: 13 YSNAYHPIQAGSIDGTDIVPHDNAIFRAQLCSSIGLYDPFGDPKATGDPYCTLFVGRLSR 72
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ E L + +E+G+V ++R+VRD VTG S+ Y F+E++ E+ A +
Sbjct: 73 LTTEETLRKVMSEFGQVKNLRLVRDIVTGASRGYAFVEFETEREMRRAYMDAHHLIVDDC 132
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
EIIVD+ +++PGW PRRLGGG GN+ SGQLRFGGR KP+ P++ + EL
Sbjct: 133 EIIVDYNRQQLMPGWIPRRLGGGLSGNKESGQLRFGGREKPFRAPLKPIPYEEL 186
>gi|426247194|ref|XP_004017371.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Ovis aries]
Length = 245
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|440898320|gb|ELR49845.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, partial
[Bos grunniens mutus]
Length = 246
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 5 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 64
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 65 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIF 124
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 125 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 169
>gi|432897351|ref|XP_004076429.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oryzias latipes]
Length = 220
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + YKP+ DP T+F+ RLN +
Sbjct: 4 WCPIAKEYDPLKAGSIDGTDVEPHDRAVWRAMSARYKPNKGVVGDPLLTVFVARLNPQTS 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L+Q F++YG + +R+VRD VTG SK YGF+EY E++ A R N+ E+
Sbjct: 64 EEKLQQIFSKYGDIKRLRLVRDIVTGFSKGYGFIEYKEERSLTRARRDANKLVVDQHELF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFEQERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|397481850|ref|XP_003812150.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan paniscus]
Length = 307
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 25 SSQTVEPRDAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHT 84
++ + P + S + + W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+
Sbjct: 45 AAARLSPSEGSPSFAENMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNK 104
Query: 85 SST-DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
DP TLF+ RLN ++E L++ F+ YG + +R+VRD VTG SK Y F+EY E+
Sbjct: 105 GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEER 164
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWV 203
A + A R + EI VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+
Sbjct: 165 AVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFR 224
Query: 204 KPVQL 208
KP+ L
Sbjct: 225 KPINL 229
>gi|432094892|gb|ELK26300.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Myotis
davidii]
Length = 246
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLAQYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLLRAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|114647660|ref|XP_509463.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 4 [Pan troglodytes]
Length = 307
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 25 SSQTVEPRDAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHT 84
++ + P + S + + W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+
Sbjct: 45 AAARLSPSEGSPSFAENMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNK 104
Query: 85 SST-DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
DP TLF+ RLN ++E L++ F+ YG + +R+VRD VTG SK Y F+EY E+
Sbjct: 105 GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEER 164
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWV 203
A + A R + EI VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+
Sbjct: 165 AVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFR 224
Query: 204 KPVQL 208
KP+ L
Sbjct: 225 KPINL 229
>gi|431912140|gb|ELK14278.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Pteropus
alecto]
Length = 246
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYAPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|62078981|ref|NP_001014149.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Rattus
norvegicus]
gi|81910233|sp|Q5U1W5.1|U1SBP_RAT RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|55562850|gb|AAH86435.1| U11/U12 snRNP 35K [Rattus norvegicus]
Length = 244
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNSQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|115495605|ref|NP_001069024.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Bos taurus]
gi|122144781|sp|Q1LZH0.1|U1SBP_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|94534832|gb|AAI16003.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
gi|296478494|tpg|DAA20609.1| TPA: small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
Length = 245
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|291414264|ref|XP_002723378.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)
[Oryctolagus cuniculus]
Length = 246
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFVEYKEERALLRAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|410976458|ref|XP_003994637.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Felis catus]
Length = 246
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAIWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|354496379|ref|XP_003510304.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cricetulus griseus]
gi|344258842|gb|EGW14946.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cricetulus
griseus]
Length = 246
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|348554281|ref|XP_003462954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cavia porcellus]
Length = 246
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L + F+ YG + +R+VRD VTG SK Y F+EY E+A L A R + E+
Sbjct: 64 EDKLREVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAHRDADGLLIDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|149063260|gb|EDM13583.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
gi|149063261|gb|EDM13584.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
Length = 244
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|340714885|ref|XP_003395953.1| PREDICTED: LOW QUALITY PROTEIN: u11/U12 small nuclear
ribonucleoprotein 35 kDa protein-like [Bombus
terrestris]
Length = 207
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP-HTSSTDPTRTLFIGRLNKNSR 103
W PY Y+P++AGSIDGTDT PHD+AI RA+++ Y+P H + P RTLF+ R
Sbjct: 8 WSPYAKKYEPLKAGSIDGTDTEPHDKAISRAMQAHYEPPHGLKSKPERTLFVARFGPKIT 67
Query: 104 EADLEQAF-AEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEI 162
+ DL++ F + YG+V+S +V+ D VTG S+ YGF+E E IR +G +I
Sbjct: 68 KHDLKEVFFSRYGEVVSAKVIVDVVTGLSQGYGFIEMRNEDEARRVIRRCVDATLKGYQI 127
Query: 163 IVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
+D+ECGR L GWKPRRLGGG+GG + SGQLRFGGR++P+ KP+
Sbjct: 128 FIDYECGRTLHGWKPRRLGGGFGGKKGSGQLRFGGRDRPFKKPI 171
>gi|115480119|ref|NP_001063653.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|50725348|dbj|BAD34420.1| ribonucleoprotein antigen-like [Oryza sativa Japonica Group]
gi|113631886|dbj|BAF25567.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|215704450|dbj|BAG93884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641906|gb|EEE70038.1| hypothetical protein OsJ_29992 [Oryza sativa Japonica Group]
Length = 375
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPH---TSSTDPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD PHD A+LRAL + Y P ++ DP T+F+GRL++
Sbjct: 15 YAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKATGDPYCTVFVGRLSR 74
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ + L + + YG+V S+R+VRD VTG S+ Y F+EY+ ++ A + GS
Sbjct: 75 YTDDETLRKEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGS 134
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
E++VD+ +++PGW PRR GGG GG + SGQLRFGGR +P+ P++ + EL
Sbjct: 135 EVLVDYYRQQLMPGWIPRRSGGGLGGKKESGQLRFGGRERPFRAPLRPIPYDEL 188
>gi|281343806|gb|EFB19390.1| hypothetical protein PANDA_000935 [Ailuropoda melanoleuca]
Length = 247
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 5 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 64
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 65 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIF 124
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 125 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 169
>gi|344297375|ref|XP_003420374.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Loxodonta africana]
Length = 259
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEEPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLNAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus]
Length = 179
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|301754651|ref|XP_002913143.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ailuropoda melanoleuca]
Length = 246
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|21624627|ref|NP_083808.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Mus
musculus]
gi|81916986|sp|Q9D384.1|U1SBP_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|12857850|dbj|BAB31127.1| unnamed protein product [Mus musculus]
gi|27695288|gb|AAH43031.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|34849818|gb|AAH58361.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|148687639|gb|EDL19586.1| RIKEN cDNA 6330548G22 [Mus musculus]
Length = 244
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|73995146|ref|XP_534648.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Canis lupus familiaris]
Length = 246
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGLSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|443707095|gb|ELU02850.1| hypothetical protein CAPTEDRAFT_133662 [Capitella teleta]
Length = 218
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Query: 52 YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSREADLEQA 110
YDP++AGSIDGTD PHD I+RAL + YKP+ +P T+F+GRLN ++ E LE+
Sbjct: 11 YDPLRAGSIDGTDADPHDNGIVRALNAKYKPNKGVRGNPECTVFVGRLNHSTTEETLEEQ 70
Query: 111 FAEYGKVISVRVVRDFVTGHSKRYGFLEY-DCEKACLAAIRALNRQNFQGSEIIVDFECG 169
F YG + +R++RD VTG S+ Y F+EY + AC A+I A N+ EI+VD EC
Sbjct: 71 FKRYGNIEHIRLIRDIVTGFSQGYAFVEYTEPNAACRASIEA-NKIVIDDKEIMVDMECE 129
Query: 170 RVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
R +PGW PRRLGGG GG + SGQLRFGGR++P+ KP+ L N
Sbjct: 130 RTMPGWVPRRLGGGLGGRKESGQLRFGGRDRPFKKPIMLHN 170
>gi|348518549|ref|XP_003446794.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oreochromis niloticus]
Length = 237
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + YKP+ DP TLF+ RLN +
Sbjct: 4 WSPIAKVYDPLKAGSIDGTDVEPHDRAVWRAMGARYKPNKGVVGDPLLTLFVSRLNPQTT 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L + F++YG + +R+VRD VTG SK Y F+EY E++ + A R N+ E+
Sbjct: 64 EDKLHKVFSKYGDIQRLRLVRDIVTGFSKGYAFIEYKEERSVVRARRDANKLVVDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VDFE R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFEQERTLKGWVPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|149720723|ref|XP_001498122.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Equus caballus]
Length = 246
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYAPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|335301144|ref|XP_003359137.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like isoform 1 [Sus scrofa]
Length = 246
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WVPIAKEYDPLKAGSIDGTDEDPHDRAIWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ L A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLLKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ +P+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRQPINL 168
>gi|355721016|gb|AES07125.1| small nuclear ribonucleoprotein 35kDa [Mustela putorius furo]
Length = 245
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 64 EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|356524599|ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
Length = 358
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 108/174 (62%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRA-------LRSTYKPHTSSTDPTRTLFIGRLNK 100
Y +Y PIQAGSIDGTD +PHD A+ RA L + ++ DP TLF+ RL++
Sbjct: 13 YADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPRAAGDPYCTLFVARLSR 72
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ E +L + ++YG+V + R+VRD VTG S+ Y F+EY+ E+ A + S
Sbjct: 73 LTNEDNLRKVMSKYGRVKNFRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDS 132
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
EIIVD+ +++PGW PRRLGGG G + SGQLRFGG+ KP+ P++ + EL
Sbjct: 133 EIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGKEKPFRAPLKPIPYEEL 186
>gi|260790715|ref|XP_002590387.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
gi|229275579|gb|EEN46398.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
Length = 213
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 39 GQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGR 97
Q+ W P Y+P++AGSIDGTD PHDRA++RA+ + Y+P+ DP TLF+
Sbjct: 3 AQSSWVWSPIARVYNPLRAGSIDGTDLDPHDRAVIRAMDAKYRPNKQVKGDPRCTLFVSN 62
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
LN + E LE+ F+++G ++ R+VRD VTG+SKRY F+EY EK+ A R +
Sbjct: 63 LNPKTTEDSLEKVFSKFGDLVRTRLVRDIVTGYSKRYAFIEYVDEKSMWHAHRKAYKMEL 122
Query: 158 QGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNE 211
+ E+ VD E R L GW PRRLGGG GG++ SGQLRFGGR +P+ KP+ + E
Sbjct: 123 EQYEVFVDVENSRTLKGWVPRRLGGGLGGSKESGQLRFGGRARPFRKPITVHTE 176
>gi|395846781|ref|XP_003796072.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Otolemur garnettii]
Length = 246
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E++ + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERSVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|351698560|gb|EHB01479.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Heterocephalus glaber]
Length = 246
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T DP TLF+ RLN ++
Sbjct: 4 WIPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L + F+ YG + +R+VRD VTG SK Y F+EY E+A L A R + E+
Sbjct: 64 EDKLREVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVVDQHEVF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|426374582|ref|XP_004054149.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 3 [Gorilla gorilla gorilla]
Length = 251
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|31077198|ref|NP_851030.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b
[Homo sapiens]
gi|441630253|ref|XP_004089520.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|52790429|gb|AAH09622.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|55249546|gb|AAH47678.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|62739916|gb|AAH93671.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|85567339|gb|AAI11956.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|312150806|gb|ADQ31915.1| U11/U12 snRNP 35K [synthetic construct]
Length = 251
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 9 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 68
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 69 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 128
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 129 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>gi|395745038|ref|XP_002823985.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Pongo abelii]
Length = 251
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|355564803|gb|EHH21303.1| hypothetical protein EGK_04324, partial [Macaca mulatta]
gi|355759389|gb|EHH61611.1| hypothetical protein EGM_19603, partial [Macaca fascicularis]
Length = 247
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 5 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 64
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 65 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 124
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 125 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 169
>gi|109099573|ref|XP_001089715.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Macaca mulatta]
Length = 246
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|300121567|emb|CBK22085.2| unnamed protein product [Blastocystis hominis]
Length = 390
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Query: 40 QTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-------DPTRT 92
Q +WY YDPI+ GS+DGTD PHDR + RA Y H ST +P +T
Sbjct: 7 QDKGFWYH--EEYDPIRNGSMDGTDIRPHDRGLKRA----YGFHFDSTKDRMICCNPYKT 60
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+GRL ++ E L Q F+ YGK+ SV ++RD VTG S+ YGF+E+ E+ +A
Sbjct: 61 LFVGRLKYDTTEEALYQFFSRYGKLQSVHLIRDLVTGCSRGYGFVEFVHEEDFTSAFYGA 120
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ 207
+R GS+I+VDF + +PGW PRRLGGG GG + SGQ+RFGGR+ P+ P +
Sbjct: 121 HRTILDGSQILVDFMRAQTVPGWVPRRLGGGVGGKKQSGQMRFGGRDCPFHAPYE 175
>gi|426374580|ref|XP_004054148.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Gorilla gorilla gorilla]
Length = 251
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 9 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 68
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 69 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 128
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 129 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>gi|332840730|ref|XP_001169924.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pan troglodytes]
Length = 251
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 9 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 68
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 69 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 128
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 129 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>gi|426374578|ref|XP_004054147.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Gorilla gorilla gorilla]
Length = 246
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|410047484|ref|XP_003952396.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan troglodytes]
Length = 246
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|13027642|ref|NP_073208.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform a
[Homo sapiens]
gi|297693357|ref|XP_002823986.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pongo abelii]
gi|332254325|ref|XP_003276277.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Nomascus leucogenys]
gi|395745035|ref|XP_003778201.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pongo abelii]
gi|441630256|ref|XP_004089521.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|74754517|sp|Q16560.1|U1SBP_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein;
Short=U11/U12-35K; AltName: Full=Protein HM-1; AltName:
Full=U1 snRNP-binding protein homolog
gi|1174217|gb|AAA86654.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|1174219|gb|AAA86655.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|32450706|gb|AAH54034.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|48427632|tpg|DAA05495.1| TPA_exp: U11/U12 snRNP 35K [Homo sapiens]
gi|119618818|gb|EAW98412.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|119618820|gb|EAW98414.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|158261277|dbj|BAF82816.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|119618819|gb|EAW98413.1| U11/U12 snRNP 35K, isoform CRA_b [Homo sapiens]
Length = 278
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|402888045|ref|XP_003907387.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Papio anubis]
Length = 254
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|403292250|ref|XP_003937166.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Saimiri boliviensis boliviensis]
Length = 252
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 9 WVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 68
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+E+ E+A + A R + EI
Sbjct: 69 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIF 128
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 129 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>gi|403292252|ref|XP_003937167.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Saimiri boliviensis boliviensis]
Length = 247
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+E+ E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|296213226|ref|XP_002753185.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Callithrix jacchus]
Length = 251
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 9 WVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVTRLNLQTK 68
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+E+ E+A + A R + EI
Sbjct: 69 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIF 128
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 129 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 173
>gi|296213228|ref|XP_002753186.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Callithrix jacchus]
gi|390468332|ref|XP_003733920.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Callithrix jacchus]
Length = 246
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WVPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVTRLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+E+ E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168
>gi|444724897|gb|ELW65483.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Tupaia
chinensis]
Length = 246
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 107/165 (64%), Gaps = 1/165 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRAI RA+ + Y P+ DP TLF+ RLN ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAIWRAMLARYAPNKGVIGDPLLTLFVARLNLQTK 63
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L++ F+ YG + +R+VRD VTG SK Y F+EY E+A + A R + EI
Sbjct: 64 EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALIKAYRDADGLVIDQHEIF 123
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
VD+E R L GW PRRLGGG GG + SGQLRFGGR++ + KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRHFRKPINL 168
>gi|242016767|ref|XP_002428900.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Pediculus
humanus corporis]
gi|212513682|gb|EEB16162.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Pediculus
humanus corporis]
Length = 177
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSR 103
W P I YDP+ GSIDGTDT PHD ++RA+ S Y TS S+ P T+F+GRL+
Sbjct: 3 WTPLAIEYDPLAVGSIDGTDTEPHDMGVVRAINSEYYSDTSLSSKPECTVFVGRLHPKVT 62
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E DL+ F EYG++ V++D VTG SK+Y F+EY+ E A R ++ +G EII
Sbjct: 63 EDDLKIVFKEYGRIKKCNVIKDIVTGGSKQYAFIEYEKESQADRAYRRGHKALIRGLEII 122
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNERE 213
VD E GR + WKPRRLGGG+GG + SGQLRFG R++PW P+ ++E
Sbjct: 123 VDREFGRTMKNWKPRRLGGGFGGRKESGQLRFGCRDRPWRPPILPEKDKE 172
>gi|218202449|gb|EEC84876.1| hypothetical protein OsI_32022 [Oryza sativa Indica Group]
Length = 385
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 18/185 (9%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPH---TSSTDPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD PHD A+LRAL + Y P ++ DP T+F+GRL++
Sbjct: 14 YAEKYHPIQAGSIDGTDVAPHDNAVLRALLCSTAGLYDPFGDPKATGDPYCTVFVGRLSR 73
Query: 101 NSREADL-----------EQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+ + L EQ + YG+V S+R+VRD VTG S+ Y F+EY+ ++ A
Sbjct: 74 YTDDETLRKFLFLVVYVREQEMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRRAY 133
Query: 150 RALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLM 209
+ G E++VD+ +++PGW PRR GGG GG + SGQLRFGGR +P+ P++ +
Sbjct: 134 EDAHHSIIDGREVLVDYYRQQLMPGWIPRRSGGGLGGKKESGQLRFGGRERPFRAPLRPI 193
Query: 210 NEREL 214
EL
Sbjct: 194 PYDEL 198
>gi|221126097|ref|XP_002166019.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Hydra magnipapillata]
Length = 218
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 41 TVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLN 99
T W P Y P+ AGSIDGTDT+PHD+A++RA +S YKP+ T DP +T+ + L+
Sbjct: 17 TFDNWSPIATFYHPLMAGSIDGTDTVPHDKAVIRASKSVYKPNKKVTGDPRKTIMVRHLS 76
Query: 100 KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQG 159
+ E+ ++Q F +G++ R+VRD +TG+S+ Y F+EY E+ A R
Sbjct: 77 LTTNESTIKQIFQRFGEIRKCRLVRDIITGNSRCYAFIEYSHERDARHASRETKDLIIDE 136
Query: 160 SEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNER 212
++ +DFEC R LPGW PRR GGG+GG + SGQLRFGG +P+ +P+ L ++R
Sbjct: 137 CKVTIDFECSRTLPGWIPRRFGGGFGGKKESGQLRFGGIERPFRRPIPLNSKR 189
>gi|325180074|emb|CCA14475.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein putative
[Albugo laibachii Nc14]
Length = 224
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 101/161 (62%), Gaps = 3/161 (1%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSRE 104
Y YDP + GSIDGT HD+A+LRA + + P S D T+TLFIGRL+ + +
Sbjct: 54 YASEYDPSRMGSIDGTGNHFHDKALLRASKLHFDPKRDSNIKGDATKTLFIGRLHSETSQ 113
Query: 105 ADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIV 164
+ Q F+ YG + VR+VRD VT SK Y F+EY + A+ N + G +++V
Sbjct: 114 DAIYQLFSSYGPIAHVRLVRDIVTKASKGYAFVEYRDRRHFERALEDGNDRILDGRKLLV 173
Query: 165 DFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKP 205
D+E R++PGWKPRR+GGG GG + SGQLRFGG + P+ +P
Sbjct: 174 DYERSRLMPGWKPRRMGGGLGGKKESGQLRFGGVSHPFKRP 214
>gi|293333112|ref|NP_001169404.1| hypothetical protein [Zea mays]
gi|224029143|gb|ACN33647.1| unknown [Zea mays]
gi|414886248|tpg|DAA62262.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea mays]
Length = 483
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 114/174 (65%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPH---TSSTDPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD PHD A+LRAL + Y P +S DP RT+F+GRL++
Sbjct: 11 YADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKASGDPHRTVFVGRLSR 70
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ + L +A + YG+V S+R+VRD VTG S+ Y F+EY+ ++ A + +GS
Sbjct: 71 QTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMHRAYEDAHHSVIEGS 130
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
E+IVD+ +++PGW PRRLGGG GG + SGQLRFGGR +P+ P++ + EL
Sbjct: 131 EVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQLRFGGRERPFRAPLRPIPYDEL 184
>gi|390358352|ref|XP_001182912.2| PREDICTED: uncharacterized protein LOC753629 [Strongylocentrotus
purpuratus]
Length = 413
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 117/182 (64%)
Query: 42 VKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKN 101
++ W+P Y P+ AGSIDGTDT PHDRA+ RA++++Y P + DP TLF+ RLN
Sbjct: 1 MESWHPIARVYHPLTAGSIDGTDTRPHDRAVERAIKASYVPPSVDNDPHLTLFVARLNPE 60
Query: 102 SREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSE 161
+ E L + F++YG + V ++RD VTG SK+Y F+E++ E++ A ++ +
Sbjct: 61 TTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEFEEERSARRARAEADQSVIEEHI 120
Query: 162 IIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNERELGEWRKQG 221
+ VD+EC L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ + R+ G R +
Sbjct: 121 VFVDWECEHTLDGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPIVVQAIRDRGIERDRD 180
Query: 222 GA 223
G
Sbjct: 181 GG 182
>gi|390355488|ref|XP_790452.3| PREDICTED: uncharacterized protein LOC585534 [Strongylocentrotus
purpuratus]
Length = 405
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 114/174 (65%)
Query: 42 VKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKN 101
++ W+P Y P+ AGSIDGTDT PHDRA+ RA++++Y P + DP TLF+ RLN
Sbjct: 1 MESWHPIARVYHPLTAGSIDGTDTRPHDRAVERAIKASYVPPSVDNDPHLTLFVARLNPE 60
Query: 102 SREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSE 161
+ E L + F++YG + V ++RD VTG SK+Y F+E++ E++ A ++ +
Sbjct: 61 TTEKTLRKTFSKYGDIKQVNLIRDVVTGFSKQYAFIEFEEERSARRARAEADQSVIEEHI 120
Query: 162 IIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNERELG 215
+ VD+EC L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ + R+ G
Sbjct: 121 VFVDWECEHTLDGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPIVVQAIRDRG 174
>gi|157114772|ref|XP_001652414.1| splicing factor, putative [Aedes aegypti]
gi|108883567|gb|EAT47792.1| AAEL001131-PA [Aedes aegypti]
Length = 214
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 51 TYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSREADLEQ 109
YDPI+ GSIDGTD PHDRA++RA+ S+YKP+ DP T+F+GRL + E +
Sbjct: 30 VYDPIKVGSIDGTDEFPHDRALVRAMNSSYKPNRKVVGDPLCTIFVGRLAPSVDENQFRK 89
Query: 110 AFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
F +G ++ R+VRD VT S+ YGF+E+ K+ L AI ++ +N +G E++VD E
Sbjct: 90 LFERFGTIVRCRLVRDVVTELSRGYGFVEFSERKSALRAIDEMHGRNLEGKELLVDEEWE 149
Query: 170 RVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
R L GWKPRRLGGG+GG + S QLRFG + +PW KPV
Sbjct: 150 RRLKGWKPRRLGGGFGGRQKSQQLRFGCKERPWRKPV 186
>gi|2289001|gb|AAB64330.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
Length = 292
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 36 SSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST---DPTRT 92
S G V Y +Y PIQAGSIDGTD PHD + RAL Y P S DP T
Sbjct: 2 SGGGNNVVNKVFYATSYHPIQAGSIDGTDVAPHDNGVRRAL--LYDPSGDSKAVGDPYCT 59
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+GRL+ ++ E L + ++YG++ ++R+VR VTG S+ YGF+EY+ EK L A
Sbjct: 60 LFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYEDA 119
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ 207
+ G EIIVD+ +++PGW PRRLGGG GG + SGQLRFGGR++P+ P++
Sbjct: 120 HHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAPLR 174
>gi|118792383|ref|XP_320292.3| AGAP012250-PA [Anopheles gambiae str. PEST]
gi|116116874|gb|EAA00555.3| AGAP012250-PA [Anopheles gambiae str. PEST]
Length = 209
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/199 (43%), Positives = 117/199 (58%), Gaps = 9/199 (4%)
Query: 36 SSSGQTVKYWYPY-CITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTL 93
S T + W Y C YDP+Q GSIDGTD +PHDRA++RA+ S Y+P+ +P T+
Sbjct: 4 SEVSPTPRRWSKYVCDVYDPVQVGSIDGTDQVPHDRALIRAINSNYRPNRKVKGNPLHTI 63
Query: 94 FIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALN 153
FIGRL + E L FA +G ++ R+V D VTG + Y F+EY L AI ++
Sbjct: 64 FIGRLAHSVTEEQLRAKFAPFGTIVHARLVTDIVTGLPRGYAFIEYSARGEALRAIERMH 123
Query: 154 RQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV-QLMNER 212
G EI+VD E R L GWKPRRLGGG+GG + S QLRFG + +P+ +P+ +
Sbjct: 124 GVTIDGKEILVDEEWERRLEGWKPRRLGGGFGGRKKSQQLRFGCKVQPFRRPILETGGVA 183
Query: 213 ELGEW------RKQGGAGS 225
+ EW RK+G AGS
Sbjct: 184 SVSEWNRRVRQRKEGPAGS 202
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRAL----RSTYKPHTSST---DPTRTLFIGRLNK 100
Y +Y PIQAGSIDGTD PHD + RAL Y P S DP TLF+GRL+
Sbjct: 14 YATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLYDPSGDSKAVGDPYCTLFVGRLSH 73
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
++ E L + ++YG++ ++R+VR VTG S+ YGF+EY+ EK L A + G
Sbjct: 74 HTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGR 133
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
EIIVD+ +++PGW PRRLGGG GG + SGQLRFGGR++P+ P++ + +L
Sbjct: 134 EIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAPLRPIPHEDL 187
>gi|339240951|ref|XP_003376401.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
gi|316974884|gb|EFV58354.1| u11/U12 small nuclear ribonucleoproteinprotein [Trichinella
spiralis]
Length = 185
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 103/159 (64%), Gaps = 1/159 (0%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W PY YDPI+ GS++GT T+ HDRA++RA YKP+ DP +TLF+GRL+ ++
Sbjct: 15 WKPYVEKYDPIKVGSVNGTATVAHDRALIRASGQHYKPNERVIGDPKKTLFVGRLSLDTV 74
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
EAD+ Q F YGK+ +R+VRD VTG SKRY F+E+ + A + S+II
Sbjct: 75 EADIHQLFGRYGKIARIRLVRDIVTGMSKRYAFVEFKHRRDMDVAWENAHHAIIDSSQII 134
Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPW 202
VD E R + GW PRRLGGG+GG + SGQ+RFG R P+
Sbjct: 135 VDREVERRMEGWIPRRLGGGFGGRKQSGQMRFGCRENPY 173
>gi|242045290|ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
gi|241923893|gb|EER97037.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
Length = 437
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPH---TSSTDPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD PHD A+LRAL + Y P +S DP T+F+GRL++
Sbjct: 11 YADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAGLYDPFGDPKASGDPYCTVFVGRLSR 70
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ + L +A + YG+V S+R+VRD VTG S+ Y F+EY+ ++ A + GS
Sbjct: 71 QTDDDTLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGS 130
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
E+IVD+ +++PGW PRRLGGG GG + SGQLRFGGR +P+ P++ + EL
Sbjct: 131 EVIVDYYRQQLMPGWIPRRLGGGLGGMKESGQLRFGGRERPFRAPLRPIPYDEL 184
>gi|405972647|gb|EKC37405.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Crassostrea
gigas]
Length = 226
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 57 AGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSREADLEQAFAEYG 115
AGSID TDT PHD I+RAL S+YKP+ + DP T+F+ RLN + E LE F+ +G
Sbjct: 2 AGSIDRTDTEPHDHGIIRALSSSYKPNKDVAGDPNLTVFVSRLNPKTDEDTLESQFSYFG 61
Query: 116 KVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGW 175
++ +R+VRD +TGHS+ Y F+E+ ++ + A R + G E++VDFE R LPGW
Sbjct: 62 EIHKIRLVRDIITGHSRGYAFVEFKEGRSAVRAERDGHGMEIDGYEVLVDFELERTLPGW 121
Query: 176 KPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
PRRLGGG GG + SGQLRFG +++PW KP+ + +
Sbjct: 122 VPRRLGGGLGGKKESGQLRFGCKDRPWRKPISMQS 156
>gi|291228234|ref|XP_002734084.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)-like
[Saccoglossus kowalevskii]
Length = 192
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 93/138 (67%), Gaps = 2/138 (1%)
Query: 45 WYPYCI-TYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNS 102
W+P YDP++AGSIDGTD IPHD+AI RA+ + YKP+ + T D +T+F+ RLN N+
Sbjct: 6 WFPIAKNAYDPLKAGSIDGTDDIPHDKAIQRAMSAKYKPNKAITGDAEKTVFVARLNLNT 65
Query: 103 READLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEI 162
E +E+ F+ YG++ +++VRD VTG SK Y F+EY +K+ A R ++ GSE+
Sbjct: 66 TEETIEKTFSRYGEIKRLKLVRDIVTGFSKGYAFVEYCSQKSAERAERKADKLIVDGSEL 125
Query: 163 IVDFECGRVLPGWKPRRL 180
VD EC R L GW PRRL
Sbjct: 126 FVDLECERKLKGWIPRRL 143
>gi|255577755|ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
gi|223530750|gb|EEF32618.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
Length = 389
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/167 (48%), Positives = 105/167 (62%), Gaps = 7/167 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRAL----RSTYKPHTSST---DPTRTLFIGRLNK 100
Y +Y PIQAGSIDGTD +PHD AI RA Y P DP TLF+GRL+
Sbjct: 11 YAKSYHPIQAGSIDGTDILPHDNAIYRAFLCFSAGLYDPLGDPKVIGDPFCTLFVGRLSH 70
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
++ E L +A ++YGKV ++R+VRD VTG S+ Y F+EY E+ A + S
Sbjct: 71 STTENTLLKAMSKYGKVRNLRLVRDIVTGASRGYAFVEYGTEREMRRAYMDAHHSFIDDS 130
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ 207
EIIVD+ +++PGW PRRLGGG GG + SGQLRFGGR +P+ P+Q
Sbjct: 131 EIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQ 177
>gi|224133078|ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|222837365|gb|EEE75744.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 112/179 (62%), Gaps = 8/179 (4%)
Query: 38 SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPHTSST---DPT 90
SG+++ + Y Y PIQAGSIDGTDT PHD A+ RAL + Y P DP
Sbjct: 2 SGRSINSVF-YADAYHPIQAGSIDGTDTAPHDNAVYRALLCSSAGLYDPFGDPKAIGDPY 60
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
T+F+GRL+ + E L +A ++YGKV ++R+VR VTG S+ Y F+E++ E+ A +
Sbjct: 61 CTIFVGRLSHLTTEDTLRKAMSKYGKVKNLRLVRHIVTGASRGYAFVEFETEREMRRAYK 120
Query: 151 ALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLM 209
SEIIVD+ +++PGW PRRLGGG GG + SGQLRFGGR +P+ P+Q +
Sbjct: 121 DGQHSYIDDSEIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRERPFRAPLQTI 179
>gi|357154271|ref|XP_003576727.1| PREDICTED: uncharacterized protein LOC100823301 [Brachypodium
distachyon]
Length = 416
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPH---TSSTDPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD PHD A+LRAL + Y P ++ +P +F+G L++
Sbjct: 14 YADKYHPIQAGSIDGTDVAPHDNAVLRALLCSGAGLYDPFGDPKATGEPYHMVFVGHLSR 73
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ + L +A + YG+V S+R+VRD VTG S+ Y F+EY+ +K A + GS
Sbjct: 74 FTGDETLRKAMSRYGRVKSMRLVRDIVTGASRGYAFVEYETDKEMRRAYEDAHHSIIDGS 133
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
E+IVD+ +++PGW PRRLGGG GG + SGQLRFGGR +P+ P++ + EL
Sbjct: 134 EVIVDYYRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLRPIPYDEL 187
>gi|170038581|ref|XP_001847127.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
gi|167882326|gb|EDS45709.1| U11/U12 snRNP 35K [Culex quinquefasciatus]
Length = 210
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 2/179 (1%)
Query: 31 PRDAKSSSGQTVKYWYPYCIT-YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-D 88
P + S + K W YC YDP+ GSIDGTD PHDRA++RA+ STYKP + D
Sbjct: 3 PPEDPQSGPSSYKPWSKYCTEEYDPVAVGSIDGTDEFPHDRALVRAMNSTYKPSPKAEGD 62
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P T+F+GRL E + + F G V+ RVVRD VTG S+ Y F+E+ K A
Sbjct: 63 PRHTVFVGRLEHCVDEERVRELFGRCGTVVRCRVVRDVVTGVSRGYAFVEFSRRKYVERA 122
Query: 149 IRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ 207
++ L+ + +G EI+VD E GR L GWKPRRLGGG+GG + S QLRFG R++PW+ P++
Sbjct: 123 LKELHGKTVEGKEILVDEEVGRTLKGWKPRRLGGGFGGRKKSQQLRFGCRDRPWMFPIK 181
>gi|449459836|ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
Length = 333
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 108/177 (61%), Gaps = 8/177 (4%)
Query: 38 SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKPHTSST---DPT 90
SG V + Y Y PIQAGSIDGTD + HD A+ RAL + Y PH DP
Sbjct: 2 SGSNVNKVF-YADNYHPIQAGSIDGTDILSHDNAVYRALLCSSAGLYDPHGDPKVFGDPY 60
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
TLF+GRL+ + E L +A ++YG+V ++R+VR VTG S+ Y F+EY+ EK A +
Sbjct: 61 CTLFVGRLSHLTTEDTLRRAMSKYGQVKNLRLVRHIVTGSSRGYAFVEYETEKEMQRAYK 120
Query: 151 ALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ 207
+ EIIVD+ R++ GW PRRLGGG GG + SGQLRFGGR +P+ P++
Sbjct: 121 DAHHSMIDDCEIIVDYNRQRLMSGWIPRRLGGGLGGKKESGQLRFGGRERPFRAPLR 177
>gi|357620131|gb|EHJ72437.1| putative U11/U12 snRNP 35K [Danaus plexippus]
Length = 181
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
Query: 51 TYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSREADLEQ 109
TYDPI+ GSIDGTDT PHD I+RAL S Y P+ DP T+F+ RLN + E +
Sbjct: 13 TYDPIKIGSIDGTDTAPHDHGIVRALNSEYVPNKKVKGDPNHTIFVARLNPRTTEDTIYS 72
Query: 110 AFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
F+++GKVI+ R+V+D VTG SK+Y F+EY+ + A++ +N + EIIV+ E
Sbjct: 73 EFSKFGKVINCRLVKDIVTGKSKQYAFVEYENLSSLDGALKDMNNEYLDSFEIIVEREAE 132
Query: 170 RVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
R L GW+PRRLGGG+GG + SGQLRFG R +P+ KP+ +
Sbjct: 133 RRLRGWRPRRLGGGFGGRKESGQLRFGCRERPFRKPIVI 171
>gi|301112318|ref|XP_002905238.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
gi|262095568|gb|EEY53620.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
Length = 204
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 107/162 (66%), Gaps = 3/162 (1%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRSTY---KPHTSSTDPTRTLFIGRLNKNSRE 104
+ YDP+Q GSIDGTDT PHD+ ++RA+ + + K DP TLF+ RL+ ++ E
Sbjct: 40 FAEEYDPVQIGSIDGTDTTPHDKGLVRAMNARFDATKDPQIHGDPYATLFVARLSFSTAE 99
Query: 105 ADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIV 164
+ + Q F+ YG + +R+VRD T SK Y F+E++ E+ A R +R+ G+ ++V
Sbjct: 100 STILQFFSNYGPIRRLRLVRDKKTDQSKGYAFVEFEHERDFGRAYRHAHRRVIDGATLLV 159
Query: 165 DFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
DFE RV+ GWKPRRLGGG GG + SGQLRFGGR++P+ P+
Sbjct: 160 DFERSRVMKGWKPRRLGGGLGGKKESGQLRFGGRDRPFKLPL 201
>gi|297824313|ref|XP_002880039.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
gi|297325878|gb|EFH56298.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 114/190 (60%), Gaps = 10/190 (5%)
Query: 36 SSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRAL----RSTYKPHTSST---D 88
S G V Y +Y PIQAGSIDGTD PHD + RAL P S D
Sbjct: 2 SGGGNNVVNKVLYATSYHPIQAGSIDGTDVAPHDNGVRRALLCYNAGLCDPSGDSKAIGD 61
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P TLF+GRL+ ++ E + + ++YG + ++R+VR VTG S+ Y F+EY+ EK L A
Sbjct: 62 PYCTLFVGRLSHHTTEDTIREVMSKYGWIKNLRLVRHIVTGASRGYAFVEYETEKEMLCA 121
Query: 149 IRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPW---VKP 205
+ G E+IVD+ +++PGW PRRLGGG GG + SGQLRFGGR++P+ ++P
Sbjct: 122 YEDAHHSLIDGREVIVDYNRQQLMPGWIPRRLGGGLGGRKESGQLRFGGRDRPFRAPLRP 181
Query: 206 VQLMNERELG 215
+ ++ ++LG
Sbjct: 182 IPHVDLKKLG 191
>gi|168024474|ref|XP_001764761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684055|gb|EDQ70460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 108/174 (62%), Gaps = 7/174 (4%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRALRST----YKP---HTSSTDPTRTLFIGRLNK 100
Y +Y PIQAGSIDGTD HD + RAL ++ Y P + DP +LF+GRL+
Sbjct: 10 YATSYHPIQAGSIDGTDITAHDNGVYRALLASTTGLYDPLGDPNAKGDPYCSLFVGRLST 69
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ E L +A +++G++ S+R+VR VTG S Y F+E++ EK A + G+
Sbjct: 70 QTDEKSLHKAMSKFGRIKSLRLVRHIVTGASCGYAFVEFETEKEMYMAYEGAHLSKLDGA 129
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNEREL 214
I+VD+ +++PGW PRRLGGG GG + SGQLRFGGR++P+ P++ + EL
Sbjct: 130 SILVDYNRQQLMPGWIPRRLGGGLGGKKESGQLRFGGRDRPFRAPLRPIPHEEL 183
>gi|302792637|ref|XP_002978084.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
gi|302826427|ref|XP_002994691.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300137142|gb|EFJ04246.1| hypothetical protein SELMODRAFT_139016 [Selaginella moellendorffii]
gi|300154105|gb|EFJ20741.1| hypothetical protein SELMODRAFT_108559 [Selaginella moellendorffii]
Length = 189
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 111/180 (61%), Gaps = 21/180 (11%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRAL--RST--YKPHTSST---DPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD +PHD I RA+ R+T Y P + DP RTLF+GRL++
Sbjct: 10 YATVYHPIQAGSIDGTDIVPHDNGIYRAMIARTTGLYDPTGDAKALGDPYRTLFVGRLSR 69
Query: 101 NSREADLEQA--------------FAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
++ E L +A ++YG V S+R+VR VTG S+ Y F+E++ EK L
Sbjct: 70 DTTEETLREATFVLHELFDLPLQVMSKYGTVKSMRLVRHIVTGASRGYAFVEFENEKDFL 129
Query: 147 AAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
A A + G++IIVD+ +++ GW PRRLGGG GG + SGQLRFGGR++P+ P+
Sbjct: 130 HAYEAAHNITIDGNQIIVDYNRQQLMRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRAPL 189
>gi|302766473|ref|XP_002966657.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
gi|300166077|gb|EFJ32684.1| hypothetical protein SELMODRAFT_407718 [Selaginella moellendorffii]
Length = 260
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 114/181 (62%), Gaps = 11/181 (6%)
Query: 48 YCITYDPIQAGSIDGTDTIPHDRAILRAL--RST--YKPHTSST---DPTRTLFIGRLNK 100
Y Y PIQAGSIDGTD +PHD I RA+ R+T Y P + DP RTLF+GRL++
Sbjct: 10 YATVYHPIQAGSIDGTDIVPHDNGIYRAMIARTTGLYDPTGDAKALGDPYRTLFVGRLSR 69
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
++ E L +A Y +S+ V R+ VTG S+ Y F+E++ EK L A A + G+
Sbjct: 70 DTTEETLREASLFY--TLSICVSRNAVTGASRGYAFVEFENEKDFLHAYEAAHNITIDGN 127
Query: 161 EIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNERELGEWRKQ 220
+IIVD+ +++ GW PRRLGGG GG + SGQLRFGGR++P+ P++ RE E +K
Sbjct: 128 QIIVDYNRQQLMRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRAPLRENIPRE--ELKKL 185
Query: 221 G 221
G
Sbjct: 186 G 186
>gi|405950278|gb|EKC18275.1| Deleted in malignant brain tumors 1 protein [Crassostrea gigas]
Length = 2051
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Query: 56 QAGSIDGTDTIPHDRAILRALRSTYKPHTS-STDPTRTLFIGRLNKNSREADLEQAFAEY 114
AGSID TDT PHD I+RAL S+YKP+ + DP T+F+ RLN + E LE F+ +
Sbjct: 1 MAGSIDRTDTEPHDHGIIRALSSSYKPNKDVAGDPNLTVFVSRLNPKTDEDTLESQFSYF 60
Query: 115 GKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPG 174
G++ +R+VRD +TGHS+ Y F+E+ ++ + A R + G E++VDFE R LPG
Sbjct: 61 GEIHKIRLVRDIITGHSRGYAFVEFKEGRSAVRAERDGHGMEIDGYEVLVDFELERTLPG 120
Query: 175 WKPRRLGG 182
W PRRLGG
Sbjct: 121 WVPRRLGG 128
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 100/163 (61%), Gaps = 15/163 (9%)
Query: 52 YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPT------RTLFIGRLNKNSREA 105
YD I+AGSIDGTD PHD AIL H S DP RT+F+GRL+ + E
Sbjct: 15 YDAIRAGSIDGTDPEPHDHAIL---------HDPSQDPQIRGSARRTVFVGRLDFVTNEE 65
Query: 106 DLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVD 165
L F +G + +R+VRD VTG SK Y F+EY+ E AA R ++ ++ + ++V+
Sbjct: 66 TLRTTFERFGPIRHLRLVRDIVTGKSKGYAFVEYEHESDAHAAYRDMHGKDIDQARVLVE 125
Query: 166 FECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
E R + GW PRRLGGG GG + SGQ+RFGGR++PW +P++
Sbjct: 126 MERERTMAGWVPRRLGGGLGGKKESGQIRFGGRDRPWRQPLRF 168
>gi|328766959|gb|EGF77011.1| hypothetical protein BATDEDRAFT_92222 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 98/158 (62%)
Query: 50 ITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQ 109
+TY+P+ AG+I GT I HD+A++ T +T P+RTLF+GRL + + L
Sbjct: 2 LTYNPVTAGNIQGTTGICHDKALILIPPDAKLDPTITTTPSRTLFVGRLAPSVTQDILAD 61
Query: 110 AFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
F YG V+ R++ + +TG S+ Y F+E + + AAIRA + + G I+VD E G
Sbjct: 62 TFRPYGTVLQCRIIVNNITGQSRGYAFVEMESQHDVNAAIRACHGIHLHGQHILVDTEHG 121
Query: 170 RVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQ 207
R + GW PRRLGGG GG + SGQ+RFGGR+ P+ P+Q
Sbjct: 122 RTVTGWIPRRLGGGLGGKKESGQMRFGGRHHPFKYPLQ 159
>gi|195999092|ref|XP_002109414.1| hypothetical protein TRIADDRAFT_53423 [Trichoplax adhaerens]
gi|190587538|gb|EDV27580.1| hypothetical protein TRIADDRAFT_53423 [Trichoplax adhaerens]
Length = 131
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 86/157 (54%), Gaps = 45/157 (28%)
Query: 51 TYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHT-SSTDPTRTLFIGRLNKNSREADLEQ 109
+YDP++AGSIDGTD++ HDRA++RA+ S YKP+T +TDP RTLFIGRLN + E
Sbjct: 19 SYDPLRAGSIDGTDSLAHDRAVIRAMTSRYKPNTLVATDPNRTLFIGRLNPKTTEG---- 74
Query: 110 AFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
+ N+ SEIIV+ E
Sbjct: 75 ----------------------------------------KDANKMMIDSSEIIVEHEYE 94
Query: 170 RVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPV 206
R L GW PRRLGGG GG + SGQLRFGGR++P+ +P+
Sbjct: 95 RKLKGWIPRRLGGGIGGKKESGQLRFGGRDRPFRRPM 131
>gi|391339647|ref|XP_003744159.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Metaseiulus occidentalis]
Length = 186
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 52 YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAF 111
YDP+ AG+ DG+ + HDRA+LRA + +KP TDP++T+F+GRL + E L + F
Sbjct: 4 YDPVVAGTRDGSGSFIHDRALLRAETAKFKPPKLDTDPSKTVFVGRLPLDLTEDRLREVF 63
Query: 112 AEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRV 171
+ G + ++ +VR ++ S+ Y FL + AI AL+ G I+V+ E GR+
Sbjct: 64 SGCGTLRNLHLVRHKISRASQGYAFLTFKHSADVNRAI-ALHGSEIGGKRILVEREVGRL 122
Query: 172 LPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
LPGWKPRRLGGG+GG + SGQ+RFGGR P
Sbjct: 123 LPGWKPRRLGGGFGGRKESGQMRFGGRACP 152
>gi|345490458|ref|XP_003426382.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like, partial [Nasonia vitripennis]
Length = 103
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYK-PHTSSTDPTRTLFIGRLNKNSR 103
W PY YDP++AGSIDGTDT PHDRA+ RA+ S Y+ PH + P RTLF+ R +
Sbjct: 15 WSPYAKEYDPLKAGSIDGTDTEPHDRAVTRAINSHYEPPHGLKSKPERTLFVSRFGPSVD 74
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHS 131
+ DL+ F+++G+V+S +V+ D VTGHS
Sbjct: 75 KHDLKDFFSKFGEVVSTQVIYDVVTGHS 102
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P +DP +TLF+GRL+ + E+ L + F ++G V SVRVV D TG + Y F+EY+
Sbjct: 185 PKAKDSDPYKTLFVGRLSYDVDESKLRREFEQWGPVKSVRVVEDVETGKPRGYAFIEYNR 244
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
E A + + + + ++VD E GR +P WKPRRLGGG G R +
Sbjct: 245 ESDMKTAYKQADGRRIENKRVVVDAERGRTVPDWKPRRLGGGLGRTRKGAK 295
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RLN + E+ +++ F YG + VR++ D VTG K Y F+EY ++ A
Sbjct: 135 DPYKTLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKA 194
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
A + + + G ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 195 AYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
>gi|198412895|ref|XP_002120814.1| PREDICTED: similar to U11/U12 snRNP 35 kDa protein [Ciona
intestinalis]
Length = 120
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%)
Query: 107 LEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
E+ F+++G + V +VRD VTG+S+ Y F+EY + A N G I+VD+
Sbjct: 4 FEEVFSKFGGLEKVTLVRDMVTGYSRGYAFVEYKDTRPLKVAYHEANGLMVDGKNILVDY 63
Query: 167 ECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
E R++ GW PRRLGGG+ G + +GQLRFG R++P+ +P++
Sbjct: 64 EHERLMEGWVPRRLGGGFAGKKEAGQLRFGCRDRPFKRPIRF 105
>gi|350645350|emb|CCD59973.1| hypothetical protein Smp_000440 [Schistosoma mansoni]
Length = 421
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 103/217 (47%), Gaps = 51/217 (23%)
Query: 45 WYPYCITY---DPIQAGSIDGTDTIPHDRAILRALRSTYKP--HTSSTDPTRTLFIGRLN 99
W+PY Y DP+ GSIDGTDT PHDRAI RAL S+YK H + + T+F+GRL
Sbjct: 192 WHPYVHQYGYYDPVTVGSIDGTDTTPHDRAIQRALTSSYKSKDHVFNRNAKATIFVGRLP 251
Query: 100 KNSREADLEQAFAE----------------YGKVIS----------VRVVRDFVTGHSKR 133
++ + L++A E Y + S + +V + VTG+
Sbjct: 252 YHTSKICLQKALHELLNKHLGNDLNKKSRKYCRSRSPFSCDEIWPKIHIVHNIVTGYPCG 311
Query: 134 YGFLEYDCEKACLAAIRALNRQNF--------------------QGSEIIVDFECGRVLP 173
Y F + E +RA Q G ++I++ G LP
Sbjct: 312 YAFAYFSSESDAERVLRAWRNQTTVSTKLHCGLKDERHCGLDIPNGDKVILEPYFGGTLP 371
Query: 174 GWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
GW+PRRLGGG GG + +GQLRFGG +P+ +P + N
Sbjct: 372 GWRPRRLGGGLGGRKEAGQLRFGGIARPFRRPFSVNN 408
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN S E+ +++ F YG + V +V D +T K Y F+EY +
Sbjct: 131 NATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTR 190
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
AA + + Q G ++VD E GR +P W+PRRLGGG G +R G G +P
Sbjct: 191 DMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQP 248
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 73 LRALRSTYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
L++L+ + PH+ S+ DP +TLF+ R++ + E+ L+ F++YG + +R+V D VTG
Sbjct: 78 LKSLKQ-WDPHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQYGPIKKIRLVTDQVTG 136
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
K Y F+E++ E+ A + + Q ++VD E GRV+ WKPR+ GGG G R
Sbjct: 137 KPKGYAFIEFEKERDMKIAYKQADGQKIDDRRVLVDIERGRVIKNWKPRKYGGGLGNTRA 196
Query: 190 SG 191
G
Sbjct: 197 GG 198
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 66/118 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN S E+ +++ F YG + V +V D +T K Y F+EY +
Sbjct: 131 NATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTR 190
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
AA + + Q G ++VD E GR +P W+PRRLGGG G +R G G +P
Sbjct: 191 DMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQP 248
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 73/118 (61%), Gaps = 9/118 (7%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP TLFI RLN ++ E L++ YGK++++R+V+DF G S+ Y F+E+D E +
Sbjct: 100 DPYNTLFIARLNYDTTERTLKRELEVYGKILNLRIVKDF-QGESRGYAFVEFDNEDSLKE 158
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR------FGGRN 199
A ++ N+++ G +++VD E GR + W P+RLGGG G R GQ + FGG N
Sbjct: 159 AYKSFNKKSIDGWKVLVDVERGRTVENWLPKRLGGGLGKVR--GQEKPESKSFFGGNN 214
>gi|67623601|ref|XP_668083.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659281|gb|EAL37866.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis]
Length = 281
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
+ DP TLFI RLN ++ E L++ YGK++++R+V+DF G S+ Y F+E+D E
Sbjct: 96 NKTFDPYNTLFIARLNYDTTERTLKRELEVYGKILNLRIVKDF-QGESRGYAFVEFDNED 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR------FGG 197
+ A ++ N+++ G +++VD E GR + W P+RLGGG G R GQ + FGG
Sbjct: 155 SLKEAYKSFNKKSIDGWKVLVDVERGRTVENWLPKRLGGGLGKVR--GQEKPESKRFFGG 212
Query: 198 RN 199
N
Sbjct: 213 NN 214
>gi|313229018|emb|CBY18170.1| unnamed protein product [Oikopleura dioica]
Length = 322
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 19/148 (12%)
Query: 80 YKPHTSS---TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH +DP +TLF+ R+ + ++ L++ F EYG++ SVR+V + G K Y F
Sbjct: 90 WNPHEDDKVESDPFKTLFVARIKFETNDSKLKREFEEYGRIKSVRIVENLKNGKPKGYAF 149
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFG 196
+E++ E+ +A + + + G ++VD E GR + GW+PRRLGGG G +R +
Sbjct: 150 VEFEKERDMHSAYKYADGKKIDGKRVLVDVERGRTVKGWRPRRLGGGLGNSRRAPS---- 205
Query: 197 GRNKPWVKPVQLMNERELGEWRKQGGAG 224
P++ E+ E R++GG G
Sbjct: 206 --------PIRT----EVDELRRRGGYG 221
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 80 YKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
Y PHT S DP +TLF+ RL+ + E+ +++ F YG + VR+V D + + Y F
Sbjct: 125 YDPHTDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDTESNKPRGYAF 184
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ---L 193
+EY + AA + + + +G ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 185 IEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 244
Query: 194 RFGGRNK 200
R GR +
Sbjct: 245 RHSGREQ 251
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 82 PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE 138
PH D +TLF+ R+N ++ E+ L + F YGK+ V +V+D TG + Y F+E
Sbjct: 92 PHNDPNAGGDAFKTLFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAFVE 151
Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+D E+ A ++ + + G ++VD E GR + GW+PRR GGG G R
Sbjct: 152 FDRERDMHTAYKSADGKKIDGRRVLVDVERGRTVKGWRPRRFGGGLGSTR 201
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRALR------------STYKPHTS---STDPTRTLFIGR 97
DP A + T+T RA + LR Y PH S DP +TLF+ +
Sbjct: 88 DPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAK 147
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
L+ + E+ +++ F YG + VR+V D T + Y F+EY + AA + + +
Sbjct: 148 LSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKI 207
Query: 158 QGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
G ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 242
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 73/114 (64%)
Query: 75 ALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
AL + K ++++P T+F+ RLN ++ E+ +++ +G++ ++ +V++ +TG + Y
Sbjct: 85 ALWNPKKNPKATSNPYNTMFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGY 144
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
F+E++ E+ AA++ALN + G+ ++ D E GR P W+PRRLG G G NR
Sbjct: 145 CFVEFEHERDMHAAVKALNGRKIDGARVVTDVERGRTRPDWRPRRLGKGLGKNR 198
>gi|145538127|ref|XP_001454769.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422546|emb|CAK87372.1| unnamed protein product [Paramecium tetraurelia]
Length = 308
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+++P +TLF+GRLN + + L + F EYG + S+R++RD + Y F+EY+ + +
Sbjct: 133 TSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIKSIRIIRDSTQDKPRGYAFIEYESKNSV 192
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G +++VD E GR + W+PRRLGGG G R S
Sbjct: 193 KQAYKYAVDKRIDGRKLVVDIERGRTILKWRPRRLGGGLGELRRS 237
>gi|145542919|ref|XP_001457146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424961|emb|CAK89749.1| unnamed protein product [Paramecium tetraurelia]
Length = 315
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+++P +TLF+GRLN + + L + F EYG + S+R++RD + Y F+EY+ + +
Sbjct: 141 TSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIKSIRIIRDSTQDKPRGYAFIEYESKNSV 200
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G +++VD E GR + W+PRRLGGG G R S
Sbjct: 201 KQAYKYAVDKRIDGRKLVVDIERGRTILKWRPRRLGGGLGELRRS 245
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRALR------------STYKPHTS---STDPTRTLFIGR 97
DP A + +T RA + LR Y P++ S DP +TLF+ R
Sbjct: 85 DPEYAPPVQEAETPTQRRARIHQLRLEKGAEKAAEELQKYDPNSDPNISGDPYKTLFVAR 144
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
LN + E+ +++ F YG + VR++ D + Y F+EY + AA + + +
Sbjct: 145 LNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKL 204
Query: 158 QGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
G ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 205 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
>gi|145544312|ref|XP_001457841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425659|emb|CAK90444.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
++DP +TLF+GRLN + + L + F EYG + SVR+VRD + Y F+EY+ + +
Sbjct: 133 TSDPYKTLFVGRLNFATTDKKLRKEFEEYGPIKSVRIVRDSTHDKPRGYAFIEYESKNSV 192
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
+A + + G +++VD E GR + W+PR LGGG G R S
Sbjct: 193 KSAYKYAVDKRVDGRKVVVDIERGRTILKWRPRYLGGGLGELRRS 237
>gi|388857223|emb|CCF49236.1| related to SNP1-U1 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 364
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 4/141 (2%)
Query: 50 ITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPH---TSSTDPTRTLFIGRLNKNSREAD 106
+T+ P+ I T AI TYKP+ ++ DP +TLF+ RL+ ++ E D
Sbjct: 89 LTHAPVTLTEIAAEKTRAEKAAIKTKGLETYKPNQNANATADPYKTLFLARLSYDTTEKD 148
Query: 107 LEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
L + F YG + + ++R+ G S+ Y F+ Y+ E+ AA + G ++VD
Sbjct: 149 LHRQFEVYGPIQQITLIRN-KQGKSRGYAFIAYESERDMKAAYKDAEGIKINGRRVMVDV 207
Query: 167 ECGRVLPGWKPRRLGGGWGGN 187
E GR + WKP RLGGG GGN
Sbjct: 208 ERGRTVKDWKPTRLGGGLGGN 228
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 80 YKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
Y PH S DP +TLF+ RL+ + E+ +++ F YG + VR+V D + + Y F
Sbjct: 121 YDPHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKRVRLVTDAESNKPRGYAF 180
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
+EY + AA + + + +G ++VD E GR +P W+PRRLGGG G R G
Sbjct: 181 IEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 235
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+STDP +TLF+ RL+ ++ E L + F YG + + ++ D +TG S+ Y F+EY+ E
Sbjct: 96 ASTDPFKTLFVARLSYDTTETKLRREFEVYGPIKKIYMITDIITGKSRGYAFIEYEHEAD 155
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
AA + + + ++VD E GR + W PRRLGGG G R
Sbjct: 156 MHAAYKHADGKKIDKRRVLVDVERGRTVKNWLPRRLGGGLGNTR 199
>gi|291222252|ref|XP_002731131.1| PREDICTED: small nuclear ribonucleoprotein 70kDa polypeptide (RNP
antigen)-like, partial [Saccoglossus kowalevskii]
Length = 402
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + S+R+V+ TG + Y F+EY+ E+ +
Sbjct: 50 DAFKTLFVARINYDTSESKLRREFESYGPINSIRMVQSVETGKPRGYAFIEYEHERDMHS 109
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG---QLRFGGRNKPWV 203
A + + + G ++VD E R + GW PRRLGGG G R G +R GR V
Sbjct: 110 AYKYADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGSTRKGGADVNIRHSGREDMMV 168
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E+ +++ F YG + VR+V D T + Y F+EY +
Sbjct: 132 NTTGDPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTR 191
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
A + + + ++VD E GR +P W+PRRLGGG G +R SGQ
Sbjct: 192 DMKNAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRISGQ 240
>gi|256072974|ref|XP_002572808.1| U1 small nuclear ribonucleoprotein 70 kD [Schistosoma mansoni]
gi|360042919|emb|CCD78329.1| putative u1 small nuclear ribonucleoprotein 70 kD [Schistosoma
mansoni]
Length = 307
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 71/114 (62%)
Query: 75 ALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
AL + K ++++P T+F+ RLN + E+ L++ +G++ ++ +V++ +TG + Y
Sbjct: 85 ALWNPKKNPKATSNPYNTMFVARLNYETTESKLKREIDVFGRINNIVMVKNVMTGKPRGY 144
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
F+E++ E+ AA+++LN + G ++ D E GR P W+PRRLG G G NR
Sbjct: 145 CFVEFEHERDMHAAVKSLNGRKIDGVRVVTDVERGRTRPDWRPRRLGKGLGKNR 198
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RLN + E +++ F YG + VR+V D VT + Y F+EY + +
Sbjct: 135 DPYKTLFVARLNYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYVHTRDMKS 194
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
A + + + ++VD E GR +P W+PRRLGGG G +R G+
Sbjct: 195 AYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGE 239
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRALR------------STYKPHTS---STDPTRTLFIGR 97
+P A + T+T RA + LR Y PH S DP +TLF+ +
Sbjct: 88 EPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAK 147
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
L+ + E+ +++ F YG + VR+V D + Y F+EY + AA + + +
Sbjct: 148 LSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKI 207
Query: 158 QGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
G ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 242
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRALR------------STYKPHTS---STDPTRTLFIGR 97
+P A + T+T RA + LR Y PH S DP +TLF+ +
Sbjct: 88 EPEYAPPVPETETPAQKRARIHKLRLEKGAAKAAEELEKYDPHNDPNVSGDPYKTLFVAK 147
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
L+ + E+ +++ F YG + VR+V D + Y F+EY + AA + + +
Sbjct: 148 LSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKI 207
Query: 158 QGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
G ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 208 DGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 242
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S DP +TLF+ RLN + E+ +++ F YG + VR++ D T + Y F+EY +
Sbjct: 133 SGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDM 192
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
AA + + + ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 193 KAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 61/100 (61%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ R++ ++ E L++ F EYG V VR+V +G + Y F+E++ +
Sbjct: 150 DPFKTLFVARVSYDATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFEHKNDMKT 209
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGN 187
A + + + +G ++VD E GR +P W+PRRLGGG GG
Sbjct: 210 AYKMADGRKIEGRRVVVDVERGRTVPNWRPRRLGGGKGGE 249
>gi|156101519|ref|XP_001616453.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium vivax Sal-1]
gi|148805327|gb|EDL46726.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Plasmodium
vivax]
Length = 452
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 66 IPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
I ++ +L+ +R +Y P + + DP +T+FIGRL+ + E L++ F YGK+ V++
Sbjct: 70 ITYNELMLKEMRKSYDPFKNADLTNDPKKTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKI 129
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+ D K YGF+E++ K+ A + + I+VD E GR + W PRRLGG
Sbjct: 130 IYD-KNFKPKGYGFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERGRTVKNWIPRRLGG 188
Query: 183 GWGGNRNSGQLRFGGRNKPWV 203
G G R S + + N W
Sbjct: 189 GKGPPRGSDERKKVTHNINWT 209
>gi|392495108|gb|AFM74217.1| U1 small nuclear ribonucleoprotein 70 kD [Spirometra
erinaceieuropaei]
Length = 297
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%)
Query: 75 ALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
AL + K ++ +P TLF+ RLN ++ E L + F YG + + +++D TG + Y
Sbjct: 85 ALWNPKKNPNATGNPYNTLFVARLNYDTSEHKLRREFDVYGPIKRISMIKDIATGKPRGY 144
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
F+E++ E+ AA + N + G I+ D E GR P W+PRRLG G G +R
Sbjct: 145 AFIEFEHERDMHAANKDANNRKIDGHRILTDIERGRTRPDWRPRRLGKGLGKSR 198
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+T+S DP +TLF+ RLN + E+ +++ F YG + VR+V D T + Y F+EY
Sbjct: 131 PNTTS-DPYKTLFVARLNYETSESRVKREFEAYGPIKRVRLVTDKDTNKPRGYAFIEYMH 189
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
+ A + + + ++VD E GR +P W+PRRLGGG G +R G
Sbjct: 190 TRDMKNAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRICG 239
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RL + E +++ F YG + VR+V D VT + Y F+EY + +
Sbjct: 135 DPYKTLFVARLGYETSEQKVKRDFEAYGPIKRVRLVTDKVTNKPRGYAFVEYAHTRDMKS 194
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
A + + + ++VD E GR +P W+PRRLGGG G +R G+
Sbjct: 195 AYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGE 239
>gi|443916274|gb|ELU37399.1| U1 snRNP 70K protein [Rhizoctonia solani AG-1 IA]
Length = 250
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 71/132 (53%), Gaps = 22/132 (16%)
Query: 77 RSTYKPH---TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
+ TYKP ++ DP +TLFI RL+KN+ E DL + F YG++ +R+VR+ G S+
Sbjct: 97 KETYKPADDPEATGDPYKTLFISRLSKNATEDDLRKEFGTYGRIERIRLVRN-KRGVSRG 155
Query: 134 YGFLEYDCEK-------ACLAAIRALNRQ-----------NFQGSEIIVDFECGRVLPGW 175
Y F+ YD EK C A LN + G I+VD E GR + GW
Sbjct: 156 YAFIVYDREKDMKGILIPCHAPTWKLNSVPTAAYKEADGISILGKRILVDVERGRTVRGW 215
Query: 176 KPRRLGGGWGGN 187
KPRRLGGG G +
Sbjct: 216 KPRRLGGGLGAS 227
>gi|56759496|gb|AAW27888.1| SJCHGC02308 protein [Schistosoma japonicum]
Length = 203
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 63/96 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ RLN ++ E+ +++ +G++ ++ +V++ +TG + Y F+E++ E+ AA++AL
Sbjct: 1 MFVARLNYDTTESKIKRELDAFGRINNIVMVKNVITGKPRGYCFVEFEHERDMHAAVKAL 60
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
N + G+ ++ D E GR P W+PRRLG G G NR
Sbjct: 61 NGRKIDGARVVTDVERGRTRPDWRPRRLGKGLGKNR 96
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+++DP +TLFI L+ ++ E L++ EYG + + +VR+ T + Y F+E++ E+
Sbjct: 98 ATSDPFKTLFISNLSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHERD 157
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + + G I+VDFE GR + WKPRRLGGG G R +
Sbjct: 158 MKDAYKQADGRKVDGRRIVVDFERGRTIKEWKPRRLGGGVGLPRQN 203
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S DP +TLF+ RLN + E+ +++ F YG + VR++ D T + Y F+EY +
Sbjct: 133 SGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLITDKETSKPRGYAFIEYMHTRDM 192
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
AA + + + ++VD E GR +P W+PRRLGGG G R G+
Sbjct: 193 KAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE 239
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E +++ F YG + VR+V D T + Y F+EY +
Sbjct: 132 NATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTR 191
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
A + + + ++VD E GR +P W+PRRLGGG G +R G+
Sbjct: 192 DMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGE 240
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E +++ F YG + VR+V D T + Y F+EY +
Sbjct: 132 NATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRVRLVTDKETNKPRGYAFIEYMHTR 191
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
A + + + ++VD E GR +P W+PRRLGGG G +R G+
Sbjct: 192 DMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIGGE 240
>gi|124514052|ref|XP_001350382.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23615799|emb|CAD52791.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 423
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 66 IPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
+ ++ IL+ R Y P + ++DP +TLFIGRL+ E L++ F YGK+ +V++
Sbjct: 70 MAYNELILKEKRKEYDPFKNEDLTSDPKKTLFIGRLSYEVSEQKLKKEFESYGKIKTVKI 129
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+ D + Y F+E++ K+ A + + + + I+VD E GR + W PRRLGG
Sbjct: 130 IYD-KNLKPRGYAFIEFEHTKSMNDAYKLADGKKIENRRILVDIERGRTIKNWIPRRLGG 188
Query: 183 GWGGNRNSGQLRFGGRNKPWV 203
G G R S + + N W
Sbjct: 189 GKGPARGSEEKKKIIHNINWT 209
>gi|340376814|ref|XP_003386926.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Amphimedon queenslandica]
Length = 100
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 51/79 (64%)
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
+TG S+RY FLEY+ + + GSE I++ E R+LPGWKPRR GGG+GG
Sbjct: 21 LTGQSRRYAFLEYEHTYEAIDLLEKRCGILINGSEAIIEMEYERILPGWKPRRYGGGFGG 80
Query: 187 NRNSGQLRFGGRNKPWVKP 205
+ SGQLRFGG +P+ KP
Sbjct: 81 QKESGQLRFGGVARPFKKP 99
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 62/105 (59%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
+ + DP +TLF+ R+N ++ E + + F YG + ++R+V++ + + Y F+EY+ E+
Sbjct: 99 SGTKDPYKTLFVARINYDTTENKIRREFEGYGPIKTIRMVKNAMNNKPRGYCFIEYEHER 158
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
AA + + + G ++VD E R + W+PRRLGGG G R
Sbjct: 159 DMHAAYKNADGKKIDGHRVLVDVERARTVRNWRPRRLGGGLGNTR 203
>gi|389584381|dbj|GAB67113.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium cynomolgi
strain B]
Length = 494
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 66 IPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
I ++ +L+ +R Y P + + DP +T+FIGRL+ + E L++ F YGK+ V++
Sbjct: 70 ITYNELMLKEMRKNYDPFKNEDLTNDPKKTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKI 129
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+ D K Y F+E++ K+ A + + I+VD E GR + W PRRLGG
Sbjct: 130 IYD-KNFKPKGYAFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERGRTVKNWIPRRLGG 188
Query: 183 GWGGNRNSGQLRFGGRNKPWV 203
G G R S + + N W
Sbjct: 189 GKGPPRGSDERKKVTHNINWT 209
>gi|82752588|ref|XP_727361.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii yoelii
17XNL]
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii
yoelii]
Length = 391
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 66 IPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
I ++ IL+ + Y P + S+DP +TLFIGRL+ E L++ F YGK+ V+V
Sbjct: 70 IAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKV 129
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+ D + Y F+E++ K+ A + + + I+VD E R + W PRRLGG
Sbjct: 130 IYD-QDKKPRGYAFIEFEHTKSVTDAYNLADGKKIENRRILVDMERARTVKNWVPRRLGG 188
Query: 183 GWGGNRNSGQ 192
G G +R S +
Sbjct: 189 GKGPSRGSDE 198
>gi|209877242|ref|XP_002140063.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555669|gb|EEA05714.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 294
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 80 YKPHTSSTD----PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
Y P +S+D P TLF+GRL+ ++ E L + F YG + + ++ D + G SK Y
Sbjct: 88 YDPRNTSSDMTDDPYNTLFVGRLSYDTTERTLRKEFETYGPIKKICLITD-LNGQSKGYA 146
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
F+EY+ E + A R N+ G ++IVD E GR + W PRRLGGG G R S
Sbjct: 147 FIEYESESSLKEAYRYSNKV-IDGRKVIVDVERGRTVENWLPRRLGGGKGPPRGS 200
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RTLF+G ++ ++ E L++ F +YG + VR++ D G + YGF+E++ ++
Sbjct: 95 DPFRTLFVGGISYDTTEKKLKREFEQYGSIKRVRLIYD-RNGKPRGYGFIEFENDRDMKE 153
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + + G ++VD E R +PGW PRRLGGG G R S
Sbjct: 154 AYKNADGKKIDGRRVLVDVERARTVPGWLPRRLGGGRGKPRGS 196
>gi|221057416|ref|XP_002261216.1| U1 small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|194247221|emb|CAQ40621.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 412
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 66 IPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
I ++ +L+ +R Y P + + DP +T+FIGRL+ + E L++ F YGK+ V++
Sbjct: 70 ITYNELMLKEMRKNYDPFKNVDLTEDPKKTIFIGRLSYDVNEKKLKKEFEVYGKIKKVKI 129
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+ D K YGF+E++ K+ A + + I+VD E R + W PRRLGG
Sbjct: 130 IYD-KNFKPKGYGFIEFEHTKSFNDAYNLADGKKIDNRRILVDVERARTVKNWIPRRLGG 188
Query: 183 GWGGNRNSGQ 192
G G R S +
Sbjct: 189 GKGPPRGSDE 198
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 71 AILRALRSTYKPHTS----STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
A ++ R+ + P+ + D +TLF+GR++ + E L F +YG V SVR+V D
Sbjct: 6 AQMQEDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVKSVRLVED- 64
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
G S+ YGF+EY+ E+ AA + + + G ++VD E GR + W PR+ GGG
Sbjct: 65 PEGKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERGRTVRDWLPRKFGGGISE 124
Query: 187 NRNSG---QLRFGGRN 199
R G +++ GR
Sbjct: 125 TRKGGADVNVKYSGRE 140
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 79 TYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
TY P + ++ D +TLF+ RL+ + E DL + F YG + ++R+VRD G S+ Y
Sbjct: 111 TYAPASNAAATPDAYKTLFLARLSYDVTEKDLHREFDMYGPIETIRLVRD-RNGKSRGYA 169
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGN 187
F+ Y+ E+ AA + + G ++VD E GR + WKP RLGGG GG
Sbjct: 170 FIAYERERDMKAAYKDADGIKIHGRRVMVDVERGRTVKDWKPMRLGGGLGGT 221
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 79 TYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
TYKP ++ D +TLF+ RL+ + E+DL + F YG + ++++RD G S+ Y
Sbjct: 116 TYKPSNNPDATPDAYKTLFLARLDYSVTESDLHREFDMYGPIEQIKLIRD-KNGKSRGYA 174
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGN 187
F+ Y+ E+ AA + G ++VD E GR + WKP RLGGG GG+
Sbjct: 175 FIAYERERDMKAAYKDAEGIKINGRRVMVDVERGRTVKDWKPTRLGGGLGGS 226
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++T+P TLFI ++N + E L AF ++G + +VRVVRD T S+ Y F+E++ +
Sbjct: 102 ATTEPFNTLFISKMNYETTEDTLRNAFGKFGPIKTVRVVRDASTNKSRGYAFVEFEKHED 161
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
A + + ++VD E GR + WKPRRLGGG G
Sbjct: 162 MKEAYKLGDGMEIDQWRVLVDVERGRTVKDWKPRRLGGGLG 202
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E +++ F YG + VR+V + T + Y F+EY +
Sbjct: 131 NATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTR 190
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
A A + + ++VD E GR +P W+PRRLGGG G R G
Sbjct: 191 DMKNAYPAADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRMGG 238
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E +++ F YG + VR+V + T + Y F+EY +
Sbjct: 131 NATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTR 190
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
A + + + ++VD E GR +P W+PRRLGGG G +R G
Sbjct: 191 DMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRMGG 238
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E +++ F YG + VR+V + T + Y F+EY +
Sbjct: 131 NATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKRVRLVTEKDTSKPRGYAFIEYVHTR 190
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
A + + + ++VD E GR +P W+PRRLGGG G +R G
Sbjct: 191 DMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRMGG 238
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN + E +++ F YG + VR+V + T + Y F+EY +
Sbjct: 131 NATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKWVRLVTEKDTSKPRGYAFIEYVHTR 190
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
+A + + + ++VD E GR +P W+PRRLGGG G +R G
Sbjct: 191 DMKSAYKQADGRKVDNKRVLVDVERGRTVPNWRPRRLGGGLGSSRMGG 238
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 77 RSTYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
+ YKP ++ DP +TLFI RL+KN+ E+DL + F +G + VR+VRD G S+
Sbjct: 106 KDNYKPAEDPEATGDPYKTLFISRLHKNASESDLRREFESFGSIERVRIVRD-KNGRSRG 164
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ ++ E+ AA + +R + G ++VD E GR + GWKPR
Sbjct: 165 YAFIVFERERDMKAAYKESDRLHIMGKRVLVDVERGRTVRGWKPR 209
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+ + RL+ + E L + F EYG V VR+V D G S+ Y F+EY+ +
Sbjct: 148 DPYKTILVARLSFDVTEKKLRREFEEYGPVKRVRLVMD-KNGKSRGYAFVEYEHKADMKE 206
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
A +A + + +G ++VD E GR + WKPRRLGGG G
Sbjct: 207 AYKAADGKKIEGRRVLVDVERGRTVENWKPRRLGGGLGA 245
>gi|324518187|gb|ADY47028.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 311
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
T++TDP +TLF+ R+N + E+ L + F ++GK+ + +V D G + Y F+EY ++
Sbjct: 89 TATTDPYKTLFVARINYETSESKLRREFEQFGKITKLILVHD-PNGKPRGYAFIEYQHKE 147
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G ++VD+E GR W PRRLGGG G R +
Sbjct: 148 NMSEAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTRRT 194
>gi|145347107|ref|XP_001418019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578247|gb|ABO96312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 70 RAILRALRSTYKPH---TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
R ++ A Y+P+ +++DP RTLFI RL + E L + YG V V++VRD
Sbjct: 77 RELIEAGLDGYRPNENPNATSDPYRTLFIARLAYDVDEDKLRREAEYYGAVSDVKLVRD- 135
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
G S+ Y F+E++ E AA R ++ + + +I D E GR GW PRRLGGG G
Sbjct: 136 EKGKSRGYAFIEFEREGDMRAAYRGMDDRRIEDRRVIADVERGRTNKGWLPRRLGGGVGR 195
Query: 187 NR 188
R
Sbjct: 196 TR 197
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 69 DRAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
++ +L R + P D +TLF+GRLN + E DL + YGKV V VVRD
Sbjct: 80 NKVVLEKARDEWDPEKDPNAQGDAYKTLFVGRLNYDVTEDDLLKEMESYGKVRQVAVVRD 139
Query: 126 FVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
++G + Y F+E++ E+ AA R + G I+VDFE GR + GW PR
Sbjct: 140 KISGKPRGYAFVEFEHERDMRAAYRYADGMRLNGRRIVVDFERGRTVDGWFPR 192
>gi|296416697|ref|XP_002838011.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633906|emb|CAZ82202.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RLN N +E DLE+ F +G + +R+VRD TG + Y F+ Y+ EK A
Sbjct: 97 DPFKTLFLSRLNYNVKEPDLEREFGRFGPIERIRIVRDKETGKHRGYAFIVYEREKDMKA 156
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + ++VD E GR + GWKPR
Sbjct: 157 AYKETDGIRIKDRRVLVDVERGRTVKGWKPR 187
>gi|328873267|gb|EGG21634.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
fasciculatum]
Length = 433
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 76 LRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSK 132
L ++PHT + DP +TLF+ R++ N+ E L++ F+++G + +R+V D V+G K
Sbjct: 82 LLQQWEPHTETRATGDPYKTLFVARIDYNTPETKLKEEFSQFGPIKKIRLVHDAVSGKPK 141
Query: 133 RYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
Y F+E++ E+ AA + + ++VDFE GRV+ WKPRR
Sbjct: 142 GYAFIEFEKERDMKAAHKYADGLKIDEKRVLVDFERGRVMKNWKPRRF 189
>gi|412989201|emb|CCO15792.1| U1 small nuclear ribonucleoprotein 70 kDa [Bathycoccus prasinos]
Length = 643
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 80 YKPHTSSTDPTRTLFIGRLNKNSREAD--LEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
+K ++ DP TLF+ RL + E + L + F YG + ++R+VRD TG Y F+
Sbjct: 229 HKDEKATGDPYATLFVARLPYAACEDEDVLRREFERYGDIKAIRIVRDTDTGKPTGYAFI 288
Query: 138 EYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
E++ E A + +G +IVD E GR P W+P RLGGG GG
Sbjct: 289 EFETEDDMKRAFARADGTRIEGKRVIVDAERGRTTPNWRPMRLGGGLGG 337
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+S DP RTLF+GR+N + E+ L + F YGK+ + +V D G + Y F+EY +
Sbjct: 98 ASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAE 156
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G ++VD+E GR W PRRLGGG G R +
Sbjct: 157 MHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKT 202
>gi|403362965|gb|EJY81219.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 170
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 43 KYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNS 102
K++ YDPI+ G DG HD A+ RA +++Y+ S +F+ +
Sbjct: 7 KFFSETIEPYDPIKVGFKDGRGKQCHDNALYRASKASYESLFDSQQNKNKIFVSNFVPRT 66
Query: 103 READLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS-- 160
E DL F+++G++ ++++RD VTG S+ Y F+E+ A N+
Sbjct: 67 SERDLVNHFSKHGEIKEIQIIRDKVTGCSRGYSFIEFYKRDDAFQAYCQANKTTMDNGSR 126
Query: 161 EIIVDF-ECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWV 203
+I VD G G+ PRRLGGG+GG Q+RFGGR+KP+
Sbjct: 127 DINVDIVRSGGKQEGFVPRRLGGGYGGKVKGSQIRFGGRDKPFF 170
>gi|320582206|gb|EFW96424.1| hypothetical protein HPODL_2081 [Ogataea parapolymorpha DL-1]
Length = 256
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 71 AILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
A+ RAL + P T + DP +T+F+GRL+ E +L + FA++G++ +RVVRD
Sbjct: 79 ALQRALLK-WNPETDTNIAGDPYKTVFVGRLDYTVNEIELREKFAQFGEIDQIRVVRDTN 137
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
TG S+ Y F+ Y E A + NR + +IVD E GRV+ WKPRRL
Sbjct: 138 TGKSRGYAFILYKSESDAKLAFQKGNRMVIKDRAVIVDIERGRVVKNWKPRRL 190
>gi|341897322|gb|EGT53257.1| CBN-RNP-7 protein [Caenorhabditis brenneri]
Length = 320
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+S DP RTLF+GR+N + E+ L + F YGK+ + +V D G + Y F+EY +
Sbjct: 98 ASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAE 156
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G ++VD+E GR W PRRLGGG G R +
Sbjct: 157 MHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKT 202
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+S DP RTLF+GR+N + E+ L + F YGK+ + +V D G + Y F+EY +
Sbjct: 98 ASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDKAE 156
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G ++VD+E GR W PRRLGGG G R +
Sbjct: 157 MHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKT 202
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP RTLF+GR+N + E+ L + F YGK+ + +V D +G + Y F+EY +
Sbjct: 98 ATEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-ESGKPRGYAFIEYSDKAE 156
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + G ++VD+E GR W PRRLGGG G R +
Sbjct: 157 MHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKT 202
>gi|167517869|ref|XP_001743275.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778374|gb|EDQ91989.1| predicted protein [Monosiga brevicollis MX1]
Length = 383
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 67 PHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
P A L A + P +S DP +TLF+GRL+ E L++ F+ YG V V +VRD
Sbjct: 83 PQLSAALEAWKPKENPKATS-DPFKTLFVGRLSYALDEEVLKKEFSTYGPVKDVSLVRD- 140
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
G S+ Y F+E++ E AA + + + +G ++VD E GR + WKPRRLG
Sbjct: 141 ADGKSRGYAFIEFEHENDLKAAYKYGDGRKIEGRRVVVDVERGRTVDDWKPRRLG 195
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
R + +YKP DP +TLFI RL+K++ E DL + F YG + VR+VRD G
Sbjct: 98 FRKAKESYKPADDPEAIGDPYKTLFIARLHKSATETDLRREFEGYGTIERVRIVRD-KNG 156
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ Y+ E+ AA + + + G I+VD E GR + GWKPR
Sbjct: 157 RSRGYAFIVYERERDMKAAYKESDGLHIMGKRILVDVERGRTVRGWKPR 205
>gi|71030936|ref|XP_765110.1| U1 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352066|gb|EAN32827.1| U1 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 227
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RTLF+ + + E L + F YGK+ VR++ D + + Y F+EY+ E+ +
Sbjct: 104 DPYRTLFVANIAYDVTEKQLSKEFQTYGKIRRVRMIHD-RSNKPRGYAFIEYENERDMVT 162
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWV 203
A + + + G +IVD E R + GW PRRLGGG G +R + + G KP V
Sbjct: 163 AYKRADGKKISGRRVIVDVERARTVEGWLPRRLGGGKGKSRGAPPKFYDG--KPLV 216
>gi|330795602|ref|XP_003285861.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
gi|325084166|gb|EGC37600.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
Length = 419
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-YGFLEYD 140
P + DP +T+F+ R++ + + LE F+++G + S+ +V+D R Y F+E++
Sbjct: 91 PELHTGDPYKTIFVSRISYQTTQKKLEYEFSQFGNIKSIYLVKDPKNPQKHRGYAFIEFE 150
Query: 141 CEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
E+ AA + + I+VD E GRV+ WKPR+ GGG G R G
Sbjct: 151 RERDMKAAYKQADGMKIDDRRILVDIERGRVIKNWKPRKFGGGLGNTRAGG 201
>gi|19114691|ref|NP_593779.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675931|sp|O13829.1|RU17_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein usp101; Short=U1 snRNP protein usp101
gi|2388912|emb|CAB11649.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe]
Length = 261
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+F+ RL+ +++E+D+E+ F YG + +RVVR+ VTG S Y F+ ++ E+
Sbjct: 97 DPYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKV 156
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
A +A G I+VD E GR + GW PR+
Sbjct: 157 AYKASAGLMLNGRRIVVDVERGRTVKGWLPRK 188
>gi|224004248|ref|XP_002295775.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
gi|209585807|gb|ACI64492.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
Length = 174
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
T+ + TLF+GRL E L + YG V ++++ D TG S+ Y F+EY+ E
Sbjct: 70 TNGMNCYNTLFVGRLAYEVTERKLLREMESYGPVKDLKLITDCKTGKSRGYAFVEYEKED 129
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
A RA + +G I+VD E G +P W PR+ GGG GG R
Sbjct: 130 DMKRAFRAADGMRLEGRAIVVDVERGHTVPNWLPRKFGGGLGGTR 174
>gi|84994904|ref|XP_952174.1| U1 small nuclear ribonucleoprotein 70 kDa [Theileria annulata
strain Ankara]
gi|65302335|emb|CAI74442.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Theileria
annulata]
Length = 227
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RTLF+ + + E L + F YGK+ VR++ D + + Y F+EY+ E+ +
Sbjct: 104 DPYRTLFVANIAYDVTEKQLSKEFQTYGKIRRVRMIHD-RSNKPRGYAFIEYESERDMVT 162
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGR 198
A + + + G +IVD E R + GW PRRLGGG G +R + + G+
Sbjct: 163 AYKRADGRKISGRRVIVDVERARTVEGWLPRRLGGGKGKSRGAPPKFYDGK 213
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
+++ DP +TLF+ R+N + E+ L + F ++GK+ + +V D G + Y F+EY ++
Sbjct: 137 SATVDPYKTLFVARINYETSESKLRREFEQFGKITRLALVHD-KNGKPRGYAFIEYQHKE 195
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+ A + + G ++VD+E GR W PRRLGGG G R
Sbjct: 196 SMSEAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTR 240
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH DP +TLF+GRLN E DL++ F++YG+V VRVVRD T SK Y F+ +D
Sbjct: 73 PHIKG-DPYKTLFVGRLNYEVTEIDLQKEFSKYGEVERVRVVRDKDTSKSKGYAFILFDH 131
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+ + AA + N +G II D E R W PRRL
Sbjct: 132 DSSAKAAYKEANGLKIKGRAIITDIERSRTFKSWVPRRL 170
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RTLF+ ++ ++ E L++ F +YG + VR++ D G + YGF+E++ ++
Sbjct: 95 DPFRTLFVAGISYDTTEKKLKREFDQYGSIKRVRLIYD-RNGKPRGYGFIEFENDRDMKE 153
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + + G ++VD E R +PGW PRRLGGG G R +
Sbjct: 154 AYKNADGKKIDGRRVLVDVERARTVPGWLPRRLGGGRGKPRGT 196
>gi|307103245|gb|EFN51507.1| hypothetical protein CHLNCDRAFT_140193 [Chlorella variabilis]
Length = 277
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RL+ + E L++ F EYG + +R+V + +G + Y F+EY+ +
Sbjct: 118 DPFKTLFVSRLSYDVTERKLKREFEEYGPIKRIRLVHNKNSGKPRGYAFIEYEHKNDMKQ 177
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
A + + + + ++VD E GR +P W+PRR GGG G
Sbjct: 178 AYKMADGRKIEDRRVLVDVERGRTVPHWRPRRFGGGKG 215
>gi|393241484|gb|EJD49006.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 363
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 77 RSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
+++YKP + DP +TLFI RL+KN+ +ADL +AF YG + VR+ RD G S+
Sbjct: 106 KASYKPSEDTEAVGDPYKTLFIARLSKNAADADLRRAFESYGPIERVRIARD-KKGRSRG 164
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
Y F+ +D E+ A + ++ G I+VD E GR + WKPRRL
Sbjct: 165 YAFIVFDRERDMKVAYKEADKMVILGKAILVDVERGRTVRDWKPRRL 211
>gi|255077010|ref|XP_002502160.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
gi|226517425|gb|ACO63418.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
Length = 465
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + +DP +TLF+GRL+ + EA L + F +G V SV VV D G + Y F+E+D
Sbjct: 160 PKLADSDPYKTLFVGRLSYDVDEAALRREFERFGAVKSVTVVED-QDGKPRGYAFVEFDR 218
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
E A R+ + +G I+VD E GR +P W+PRR
Sbjct: 219 ESDMKHAYRSADGLRLEGRRILVDAERGRTVPDWRPRRFN 258
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 77 RSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
+ TYKP DP +TLFI RL+KN+ E+DL + F YG + VR+VRD G S+
Sbjct: 97 KDTYKPADDPEAVGDPYKTLFISRLHKNATESDLRREFESYGMIERVRIVRD-KQGRSRG 155
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ Y+ E+ A + + G I+VD E GR + GWKPR
Sbjct: 156 YAFIVYERERDMKTAYKESDGLVILGKRILVDVERGRTVRGWKPR 200
>gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56526457|emb|CAH81463.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 373
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 64 DTIPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISV 120
+ I ++ IL+ + Y P + S+DP +TLFIGRL+ E L++ F YGK+ V
Sbjct: 68 EKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFETYGKIKYV 127
Query: 121 RVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+V+ D + Y F+E + K+ A + + + I+VD E R + W PRRL
Sbjct: 128 KVICD-QNKKPRGYAFIE-EHTKSVTDAYNLADGKKIENRRILVDMERARTVKNWLPRRL 185
Query: 181 GGGWGGNRNSGQLRFGGRNKPW 202
GGG G +R S + + N W
Sbjct: 186 GGGKGPSRGSDERKKMTHNVNW 207
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
R + +YKP DP +TLFI RL+K++ E DL + F +G + VR+VRD G
Sbjct: 97 FRIAKESYKPADDPEAVGDPYKTLFIARLHKSATEGDLRREFEGFGSIERVRIVRD-KNG 155
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ ++ E+ AA + +R + G ++VD E GR + GWKPR
Sbjct: 156 RSQGYAFIVFERERDMKAAYKESDRLHIMGKRVLVDVERGRTVRGWKPR 204
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+ +S+YKP DP +TLFI RL+K + E DL + F YG + VR+VRD G
Sbjct: 88 FKLAKSSYKPADDPEAVGDPYKTLFISRLHKTATETDLRREFEGYGTIERVRIVRD-KKG 146
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ Y+ E+ AA + + + G I+VD E GR + GWKPR
Sbjct: 147 RSRGYAFVVYERERDMKAAYKESDGLHIMGKRILVDVERGRTVRGWKPR 195
>gi|338762844|gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISV-----------------RVVRDFVT 128
S DP +TLF+ RLN + E+ +++ F YG + V R+V D T
Sbjct: 133 SGDPYKTLFVARLNYETTESRIKREFEAYGAIKRVGIKEHRECALVIGFWFVRLVTDKST 192
Query: 129 GHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+ Y F+EY + AA + + + ++VD E GR +P W+PRRLGGG G R
Sbjct: 193 NKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRRLGGGLGTTR 252
Query: 189 NSGQ---LRFGGRNKPWVKP 205
G+ R+ GR + V+P
Sbjct: 253 VGGEELNQRYSGREQ--VQP 270
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 80 YKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY 139
+K ++ +P +TLF+ RL+ ++ E L+ F +G+V SV +V+D TG + Y F+E+
Sbjct: 89 HKDENATAEPYKTLFVSRLSFDTTEKTLKHEFEAFGEVKSVSIVKDLKTGKPRGYAFIEF 148
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ E+ A + G I+VD E GR +PGWKPR
Sbjct: 149 EHERDMKIAYKDAEGLKIDGRRILVDVERGRTVPGWKPR 187
>gi|428186025|gb|EKX54876.1| hypothetical protein GUITHDRAFT_45393, partial [Guillardia theta
CCMP2712]
Length = 200
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
++ +D +TLF+GRL+ + E L++ +YG V S +V D T + YGF+E++ E
Sbjct: 95 YSFESDAYKTLFVGRLSFMTDEHKLKREMEQYGPVKSAVLVYDKDTSKPRGYGFVEFEHE 154
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+ A + + + G I+VD E GR + WKPR++GGG G +R
Sbjct: 155 RDMKTAYKHADGRKIDGRRILVDVERGRTVKDWKPRKIGGGLGSSR 200
>gi|157867375|ref|XP_001682242.1| putative U1 small nuclear ribonucleoprotein [Leishmania major
strain Friedlin]
gi|68125694|emb|CAJ04192.1| putative U1 small nuclear ribonucleoprotein [Leishmania major
strain Friedlin]
Length = 283
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%)
Query: 77 RSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
R+ + + +DP RT+ + L+ + E DL ++G+V+SVR+VR TG S+RY F
Sbjct: 122 RNPFTDLNARSDPLRTVVMANLHPETVEEDLRHFADQFGRVLSVRIVRHHRTGKSRRYAF 181
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+E++ A++ ++ +G II+D E GR PG+ P+RL
Sbjct: 182 VEFNLVGEARKAVQFHRKKRLKGYSIIIDREKGRTEPGFLPKRL 225
>gi|346226819|ref|ZP_08847961.1| RNP-1 like RNA-binding protein [Anaerophaga thermohalophila DSM
12881]
Length = 93
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 8/97 (8%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ +L+ ++ DLEQ F+E+G+VIS +V+ D TG+SKRYGF+E + AAI L
Sbjct: 3 IFVAKLSSRTKSEDLEQMFSEFGEVISAKVIMDRETGYSKRYGFVEMANDDEATAAIENL 62
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
+ + GS I+V PR GG GG+RN
Sbjct: 63 DDKEVDGSRIVV--------KKAHPREETGGRGGHRN 91
>gi|213410617|ref|XP_002176078.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
gi|212004125|gb|EEB09785.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
Length = 270
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
LR +R + P DP +T+FIGRL+ +++E+++E+ F YG + +R+VRD +
Sbjct: 79 LREMRKRWNPDEDRNIVGDPYKTIFIGRLSYDTKESEIEREFIRYGPIDRIRIVRDKDSD 138
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+ Y F+ ++ E+ AA RA +R G +++VD E GR + W PRRL
Sbjct: 139 KPRGYAFVVFERERDLKAAYRASDRLYINGRKVVVDVERGRTVKDWYPRRL 189
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+ + YKP + DP +TLFI RL+K++ ++DL + F +G + VR+VRD G
Sbjct: 97 FKIAKEIYKPADDAEAVGDPFKTLFIARLHKSATDSDLRREFEGFGSIERVRIVRD-KRG 155
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ ++ E+ AA + +R + G ++VD E GR + GWKPR
Sbjct: 156 RSRGYAFIVFERERDMKAAYKESDRLHIMGKRVLVDVERGRTVRGWKPR 204
>gi|325190173|emb|CCA24652.1| hypothetical protein TRIADDRAFT_51837 [Albugo laibachii Nc14]
Length = 305
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ D +TLF+GR++ + E L F ++G + +R+V + G S+ Y F+EY+ E
Sbjct: 113 TEDAYKTLFVGRISYETTEKQLRHEFEQFGAIKHIRLV-EGEEGKSRGYAFIEYEHEADL 171
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG---QLRFGGRN 199
AA + + + G ++VD E GR + W+PR+ GGG G R G +++ GR
Sbjct: 172 KAAYKFADGKKIDGRRVVVDVERGRTVHEWRPRKFGGGIGETRKGGPDVNVKYSGRE 228
>gi|146082991|ref|XP_001464648.1| putative U1 small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|134068741|emb|CAM67046.1| putative U1 small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
Length = 375
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
+DP RT+ + L+ + E DL ++G+V+SV +VR + TG S+RY F+E++
Sbjct: 224 SDPLRTVVMANLHPETVEEDLRHFSDQFGRVLSVHIVRHYKTGKSRRYAFVEFNLVGEAR 283
Query: 147 AAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
A++ ++ +G II+D+E GR PG+ P+RL
Sbjct: 284 KAVQFHRKKRLKGYSIIIDWEKGRTEPGFLPKRL 317
>gi|425780249|gb|EKV18264.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
PHI26]
Length = 408
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 69 DRAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
++ I L++ YKP + DP +TLF+GRLN ++EADLE+ F +G + + +V+D
Sbjct: 78 EKQIAEGLKN-YKPKENPQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISIVKD 136
Query: 126 FVTGHSKR----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
V+ K+ Y F+ ++ EK AA + +G +VD E GR GWKPR
Sbjct: 137 TVSDKKKKPHRGYAFVVFEREKDMRAAYKETESLRIKGRLAVVDVERGRTTKGWKPR 193
>gi|425767063|gb|EKV05646.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
Pd1]
Length = 408
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 69 DRAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
++ I L++ YKP + DP +TLF+GRLN ++EADLE+ F +G + + +V+D
Sbjct: 78 EKQIAEGLKN-YKPKENPQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISIVKD 136
Query: 126 FVTGHSKR----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
V+ K+ Y F+ ++ EK AA + +G +VD E GR GWKPR
Sbjct: 137 TVSDKKKKPHRGYAFVVFEREKDMRAAYKETESLRIKGRLAVVDVERGRTTKGWKPR 193
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLFIG+L+ ++ E L++ F YG V VR+V D T + Y F+E+ +
Sbjct: 93 DPYKTLFIGKLSYDTTEHRLQREFERYGPVKRVRLVHDKHTDKPRGYAFVEFYHSQDMKN 152
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + I+VD E GR + W P+RLGGG G R+S
Sbjct: 153 AYKHADGTKIDNRRILVDVERGRTVKDWLPKRLGGGLGNARSS 195
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKV-------------ISVRVVRDFVTGH 130
++ DP +TLF+ RLN + E +++ F YG + + VR+V D T
Sbjct: 132 NATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGFIRLLVRLVTDKETNK 191
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
+ Y F+EY + A + + + ++VD E GR +P W+PRRLGGG G +R
Sbjct: 192 PRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIG 251
Query: 191 GQ 192
G+
Sbjct: 252 GE 253
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKV-------------ISVRVVRDFVTGH 130
++ DP +TLF+ RLN + E +++ F YG + + VR+V D T
Sbjct: 132 NATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGFIRLLVRLVTDKETNK 191
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
+ Y F+EY + A + + + ++VD E GR +P W+PRRLGGG G +R
Sbjct: 192 PRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNWRPRRLGGGLGSSRIG 251
Query: 191 GQ 192
G+
Sbjct: 252 GE 253
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RL + E DLE+ + ++G V VR+VRD +G S YGF+E+ E
Sbjct: 116 DPFKTLFVARLAFDVTENDLEEHYIKFGPVKHVRIVRDLKSGKSNGYGFVEFQEEDDFRK 175
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + N +G +++VD E GR + GW PR
Sbjct: 176 AFQMTNGSIIKGRKVVVDVERGRTVSGWLPR 206
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+ + RL+ + + L + F E+G + VR+V D G + Y F+E++ +
Sbjct: 148 DPYKTIIVARLSYDVTDKKLRREFEEFGPIKRVRIVTD-KQGKPRGYAFIEFEHKADMKE 206
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
A +A + + +G ++VD E GR + WKPRRLGGG G
Sbjct: 207 AYKAADGKKIEGRRVLVDVERGRTVENWKPRRLGGGLGA 245
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+ + YKP + DP +TLFI RL+K++ E DL + F YG + VR+VRD
Sbjct: 95 FKKAKENYKPADDAEAVGDPYKTLFISRLHKSATETDLRREFEGYGTIERVRIVRD-KKN 153
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ Y+ E+ AA + + + G +I+VD E GR + GWKPR
Sbjct: 154 RSRGYAFIVYERERDMKAAYKESDGLHIMGKKILVDVERGRTVRGWKPR 202
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+ + YKP + DP +TLFI RL+K++ E DL + F YG + VR+VRD
Sbjct: 95 FKKAKENYKPADDAEAVGDPYKTLFISRLHKSATETDLRREFEGYGTIERVRIVRD-KKN 153
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ Y+ E+ AA + + + G +I+VD E GR + GWKPR
Sbjct: 154 RSRGYAFIVYERERDMKAAYKESDGLHIMGKKILVDVERGRTVRGWKPR 202
>gi|452986309|gb|EME86065.1| hypothetical protein MYCFIDRAFT_7010, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 203
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 77 RSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
+ YKP+ D +TLFI RL + DLE+ F +G + +R+V D G K
Sbjct: 87 KEFYKPNEDENIRGDAFKTLFISRLPYDVGTKDLEKEFGRFGPIERIRIVTDRGEGPKKG 146
Query: 134 ----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
Y F+ ++ EK AA + + +G +++VD E GR + GW+PRR GGG GG
Sbjct: 147 KPRGYAFILFEREKDMKAAYKESDALYIKGRKVLVDVERGRTVAGWRPRRFGGGMGG 203
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+ + TYKP DP +TLFI RL+K + E +L + F +G + VR+VRD G
Sbjct: 96 FKIAKETYKPSDDPEAIGDPYKTLFISRLHKGASEMELRRDFESFGTIERVRIVRD-SKG 154
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ Y+ E+ AA + + + G I+VD E GR + GWKPR
Sbjct: 155 RSRGYAFIVYERERDMKAAYKESDGLHINGKRILVDVERGRTVRGWKPR 203
>gi|154335039|ref|XP_001563766.1| putative U1 small nuclear ribonucleoprotein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060788|emb|CAM37804.1| putative U1 small nuclear ribonucleoprotein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 281
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 57/97 (58%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
+DP RT+ + L+ + E DL ++G+V++VR+VR TG S+RY F+E++
Sbjct: 130 SDPLRTVVMANLHPETVEEDLRHFADQFGRVLNVRIVRHHKTGKSRRYAFVEFNLVGEAR 189
Query: 147 AAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGG 183
AI+ ++ +G II+D E GR PG+ P+RL
Sbjct: 190 KAIQFHRKKRLKGYSIIIDKEKGRTEPGFLPKRLEAA 226
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+ + TYKP DP +TLFI RL+K + E +L + F +G + VR+VRD G
Sbjct: 96 FKIAKETYKPSDDPEAIGDPYKTLFISRLHKGASEMELRRDFESFGTIERVRIVRD-SKG 154
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y F+ Y+ E+ AA + + + G I+VD E GR + GWKPR
Sbjct: 155 RSRGYAFIVYERERDMKAAYKESDGLHINGKRILVDVERGRTVRGWKPR 203
>gi|66828257|ref|XP_647483.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
gi|74997505|sp|Q55FQ0.1|RU17_DICDI RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|60475520|gb|EAL73455.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 68 HDRAILRALRS--TYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
+D I ++L++ Y ++ DP +T+F+ R++ + + LE F ++G + S+ +V+D
Sbjct: 74 NDERISKSLKAWDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLFLVKD 133
Query: 126 FVTGHSKR-YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGW 184
Y F+E++ E+ AA + + I+VD E GRV+ WKPR+ GGG
Sbjct: 134 SNNPEKHTGYAFIEFERERDMKAAYKQADGMKIDDRRIVVDIERGRVIKNWKPRKFGGGL 193
Query: 185 GGNRNSG 191
G R G
Sbjct: 194 GNTRAGG 200
>gi|358054541|dbj|GAA99467.1| hypothetical protein E5Q_06166 [Mixia osmundae IAM 14324]
Length = 375
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
TYKP DP RT+FI RL++++ E L + F YG++ +++++RD S+ Y
Sbjct: 100 TYKPKEDEHAVGDPYRTIFISRLHRDATEEQLRKEFDLYGRIENLKIIRD-SKEKSRGYA 158
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
F+ Y+ E+ AA + + G I+VD E GR + GWKPRR
Sbjct: 159 FILYERERDMKAAYKDADGLKILGKRILVDVERGRTVKGWKPRR 202
>gi|150865863|ref|XP_001385249.2| hypothetical protein PICST_32340 [Scheffersomyces stipitis CBS
6054]
gi|149387119|gb|ABN67220.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 314
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE---KA 144
DP RT+F+ RL+ + E D+ + F++YG + SVR++RD VTG S+ YGF+ ++ E ++
Sbjct: 113 DPYRTIFVSRLDFSLTELDISKHFSKYGVIESVRIIRDSVTGKSRGYGFIVFEREWDAQS 172
Query: 145 CLAAI-RALNRQNFQGSEIIVDFECGRVLPGWKP 177
C++ + R R I+VD E GR++ W+P
Sbjct: 173 CISEVARTGVRLPQAKRTILVDIERGRIVSNWRP 206
>gi|68064271|ref|XP_674124.1| u1 small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56492466|emb|CAH97184.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 319
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 66 IPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
I ++ IL+ + Y P + S+D +TLFIGRL+ E L++ F YGK+ V+V
Sbjct: 19 IAYNELILKEKKKEYDPFKNNDISSDLKKTLFIGRLSYEVNEKKLKKEFETYGKIKYVKV 78
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+ D + Y F+E++ K+ A + + I+VD E R + W RRLGG
Sbjct: 79 IYD-QDKKPRGYAFIEFEHTKSVTDAYNLADGKKIDNRRILVDMERARTVKNWILRRLGG 137
Query: 183 GWGGNRNSGQ 192
G G +R S +
Sbjct: 138 GKGPSRGSDE 147
>gi|58258329|ref|XP_566577.1| U1 snRNP 70K protein (short form) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222714|gb|AAW40758.1| U1 snRNP 70K protein (short form), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 429
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 78 STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
S YKP + DP +TLFI RL+K + E DL + F YG + +R+VR+ G S Y
Sbjct: 137 SNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNR-KGKSNGY 195
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+ Y+ E+ AA + +I+VD E GR + GWKP+
Sbjct: 196 AFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|134106223|ref|XP_778122.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260825|gb|EAL23475.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 78 STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
S YKP + DP +TLFI RL+K + E DL + F YG + +R+VR+ G S Y
Sbjct: 137 SNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNR-KGKSNGY 195
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+ Y+ E+ AA + +I+VD E GR + GWKP+
Sbjct: 196 AFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|405117502|gb|AFR92277.1| U1 snRNP 70K protein [Cryptococcus neoformans var. grubii H99]
Length = 435
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 78 STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
S YKP + DP +TLFI RL+K + E DL + F YG + +R+VR+ G S Y
Sbjct: 137 SNYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNR-KGKSNGY 195
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+ Y+ E+ AA + +I+VD E GR + GWKP+
Sbjct: 196 AFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|328858676|gb|EGG07788.1| hypothetical protein MELLADRAFT_35320 [Melampsora larici-populina
98AG31]
Length = 203
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP RTLFI RL+ + E+DL++ F YG + + +V++ +TG S+ Y F+ ++ EK
Sbjct: 102 ATGDPYRTLFISRLSFEATESDLKKEFDMYGPIEKLLIVKNKLTGKSRGYAFILFEREKD 161
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + +G I+VD E GR + GWKPR
Sbjct: 162 MKAAYKDAEGLKIKGRRILVDVERGRTVKGWKPR 195
>gi|323451829|gb|EGB07705.1| hypothetical protein AURANDRAFT_59089 [Aureococcus anophagefferens]
Length = 457
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH P LFI +LNK + +ADLE F+ +GK+ S +VRD+ TG S + F+ ++
Sbjct: 257 PHADVEVPKTELFIAKLNKVTEDADLEIIFSRFGKIESCDIVRDWKTGDSLNFAFIAFEE 316
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
EKAC+ A + +N S I VDF
Sbjct: 317 EKACVEAYKKMNNVLIDDSRIRVDF 341
>gi|403222137|dbj|BAM40269.1| U1 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 222
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP RTLF+ + E L + F YGK+ VR++ D + Y F+E++ E+
Sbjct: 102 THDPYRTLFVANIAYEVTERQLCKEFEVYGKIRRVRMIHD-RKNKPRGYAFIEFESERDM 160
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGR 198
+ A + + + G +IVD E R + GW PRRLGGG G +R + + GR
Sbjct: 161 VLAYKRGDGKKISGRRVIVDVERARTVEGWLPRRLGGGKGRSRRAPPKFYDGR 213
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%)
Query: 75 ALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
AL Y + + DP +TLF+ R+N ++ E+ L + F +G + + +V + +TG + Y
Sbjct: 86 ALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRGY 145
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW PR
Sbjct: 146 AFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWLPR 189
>gi|429327719|gb|AFZ79479.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Babesia equi]
Length = 221
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ + E L + F YG++ +R++ D + Y F+E+D E+ +A
Sbjct: 105 DPYKTLFVSNIAYEVTERQLWKEFEVYGRIRRIRMIYD-QDNKPRGYAFIEFDSERDMVA 163
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGR 198
A + + + G ++VD E R + GW PRRLGGG G +R + + G+
Sbjct: 164 AYKRADGRKISGRRVVVDVERARTVEGWLPRRLGGGKGPSRGAPPKFYDGK 214
>gi|321251142|ref|XP_003191972.1| U1 snRNP 70K protein (short form) [Cryptococcus gattii WM276]
gi|317458440|gb|ADV20185.1| U1 snRNP 70K protein (short form), putative [Cryptococcus gattii
WM276]
Length = 435
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 74 RALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGH 130
++ + YKP + DP +TLFI RL+K + E DL + F YG + +R+VR+ G
Sbjct: 133 KSAEANYKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPIERIRIVRNR-KGK 191
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S Y F+ Y+ E+ AA + +I+VD E GR + GWKP+
Sbjct: 192 SNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGWKPQ 239
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 70 RAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
R L + T+ P S DP +TLF+GR+N ++ E L + F YG V + +V D
Sbjct: 78 RLKLESEIETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRREFESYGPVKRINIVSDP 137
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+G + Y F+EY+ E+ +A + + + G ++VD E GR + WKPRRL
Sbjct: 138 KSGKPRGYAFVEYENERDMHSAYKYADGKKIDGKRVVVDVERGRTVKSWKPRRL 191
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLFI +++ ++ E L + F ++G++ S+R+V+D G + Y F+EY+ E
Sbjct: 118 DAYKTLFIAKISYDTTEKKLRREFEQFGRIQSIRMVQD-EDGKPRGYAFVEYENEDDMRV 176
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + + G ++VD E GR + W PRR GGG G +R
Sbjct: 177 AYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSRKE 219
>gi|242761917|ref|XP_002340274.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
gi|218723470|gb|EED22887.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
Length = 381
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR----YGFLEYDCEK 143
DP RTLF+ RL+ + +E+DLE+ F +G + +R+V+D +SK+ Y F+ Y+ EK
Sbjct: 99 DPFRTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTEKQNSKKPHRGYAFIVYEREK 158
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E GR + GWKPR
Sbjct: 159 DMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 193
>gi|255953297|ref|XP_002567401.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589112|emb|CAP95234.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR----YGFLEYDCEK 143
DP +T+F+ RL+ +++E DLE+ F +G + + +V+D V+ K+ YGF+ ++ EK
Sbjct: 99 DPFKTIFVSRLSYDTKETDLEREFGRFGPIERISIVKDTVSDKKKKPHRGYGFVVFEREK 158
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + +G ++VD E GR GWKPR
Sbjct: 159 DMKAAYKETENLSIRGRPVVVDVERGRTTKGWKPR 193
>gi|358374136|dbj|GAA90730.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus kawachii IFO
4308]
Length = 390
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCE 142
DP +TLF+ RL+ + +E+DLE+ F +G + +R+V+D VT + Y F+ Y+ E
Sbjct: 99 DPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDIVTPKGSKKPHRGYAFIVYERE 158
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
K AA + + + ++VD E GR + GWKPR
Sbjct: 159 KDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 194
>gi|145249558|ref|XP_001401118.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus niger CBS
513.88]
gi|134081800|emb|CAK42056.1| unnamed protein product [Aspergillus niger]
gi|350639553|gb|EHA27907.1| hypothetical protein ASPNIDRAFT_201684 [Aspergillus niger ATCC
1015]
Length = 389
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-- 133
TY+P DP +TLF+ RL+ + +E+DLE+ F +G + +R+V+D VT +
Sbjct: 87 TYEPSNDQQARGDPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKP 146
Query: 134 ---YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ Y+ EK AA + + + ++VD E GR + GWKPR
Sbjct: 147 HRGYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 194
>gi|401418716|ref|XP_003873849.1| putative U1 small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490081|emb|CBZ25343.1| putative U1 small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 282
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
+DP RT+ + L+ + E DL ++G+V SVR+VR TG S RY F+E++
Sbjct: 131 SDPLRTVVMANLHPETVEEDLRHFADQFGRVRSVRIVRHHKTGKSCRYAFVEFNLVGEAR 190
Query: 147 AAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
A++ ++ +G II+D E GR PG+ P+RL
Sbjct: 191 KAVQFHRKKRLKGYSIIIDREKGRTEPGFLPKRL 224
>gi|388580661|gb|EIM20974.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 324
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 74 RALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGH 130
RAL YKP DP +TLFI RL+ + E+DL + F YG + VR+VR TG
Sbjct: 98 RAL-EHYKPTEDIEAIGDPFKTLFIARLSVETTESDLRKEFEVYGPIERVRIVRHKDTGK 156
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
S+ Y FL ++ E+ AA + G I+VD E GR + GWKPR
Sbjct: 157 SRGYAFLIFEKERDMKAAYKDAEGLKIHGKRILVDVERGRTVKGWKPR 204
>gi|294955087|ref|XP_002788400.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
gi|239903800|gb|EER20196.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
Length = 877
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 72 ILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVT 128
++ L++ YKP + S DP +TLF+ R+ + E L++ F EYG + V ++ D +
Sbjct: 79 LIERLKADYKPQNNDKVSGDPFKTLFVARVAYETTEKQLQRIFGEYGPIRKVTIIHD-LE 137
Query: 129 GHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
G S+ Y F+EYD E + A + + G ++VD E GR + GW PR
Sbjct: 138 GRSRGYAFIEYDNENSLKQAYKNADGIKVDGRRVLVDVERGRTVSGWIPR 187
>gi|409197759|ref|ZP_11226422.1| RNP-1 like RNA-binding protein [Marinilabilia salmonicolor JCM
21150]
Length = 121
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ +L+ ++ DLEQ F E+G+V S +V+ D TG+SKR+GF+E + A AAI L
Sbjct: 28 IFVAKLSSRTKSEDLEQMFGEFGEVTSAKVIMDRETGYSKRFGFVEMPDDSAANAAIENL 87
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR 194
+ + F GS I+V +PR G GG R Q R
Sbjct: 88 DDKEFDGSHIVV--------KKARPREEAAGRGGGRQFRQSR 121
>gi|212529894|ref|XP_002145104.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
gi|210074502|gb|EEA28589.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
Length = 382
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR--- 133
Y P T + DP RTLF+ RL+ + +E+DLE+ F +G + +R+V+D + K+
Sbjct: 88 YDPATDAQIRGDPFRTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDSENPNPKKPHR 147
Query: 134 -YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ Y+ EK AA + + + ++VD E GR + GWKPR
Sbjct: 148 GYAFIVYEREKDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 193
>gi|409197867|ref|ZP_11226530.1| RNP-1 like RNA-binding protein [Marinilabilia salmonicolor JCM
21150]
Length = 99
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
LF+ +L+ + DL FAEYG+V+S +V+ D TG SKR+GF+E + A AI+
Sbjct: 2 NLFVAKLSDATTSEDLNDLFAEYGEVVSAKVIMDRETGSSKRFGFVEMKEDDAAQKAIKD 61
Query: 152 LNRQNFQGSEIIVDFECGRVLPGWKPRRLGGG----WGGNRNSGQLRF 195
LN F S I+V K R G G +GGNRN GQ R+
Sbjct: 62 LNECLFDNSPIVV----------KKARPKGEGRERSFGGNRNQGQRRY 99
>gi|378726735|gb|EHY53194.1| U1 small nuclear ribonucleoprotein 70kDa [Exophiala dermatitidis
NIH/UT8656]
Length = 377
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 72 ILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVT 128
I R S Y+P D +TLF+GRL+ + +EADLE+ F +G + +R+V+D T
Sbjct: 82 IQREDFSGYRPQDDPKIKGDAAKTLFVGRLSYDVKEADLEREFGRFGPIERIRIVKDETT 141
Query: 129 GHSKR----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
K+ Y F+ ++ EK AA + + + +++VD E GR++PGW+PR
Sbjct: 142 PKPKKPHRGYAFIVFEREKDMRAAYKETDGLRIKDRKVVVDVERGRMVPGWRPR 195
>gi|119478256|ref|XP_001259339.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
gi|119407493|gb|EAW17442.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
Length = 382
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCE 142
DP +TLF+ RL+ + +E+DLE+ F +G + +R+V+D VT + Y F+ Y+ E
Sbjct: 99 DPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYERE 158
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
K AA + + + ++VD E GR + GWKPR
Sbjct: 159 KDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 194
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG---Q 192
F+EY+ E+ +A + + + G ++VD E GR + GW+PRRL G G ++
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLEPGAPGLKSGHADVN 207
Query: 193 LRFGGRN 199
+R GR+
Sbjct: 208 IRHSGRD 214
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + + G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
+A + + + G ++VD E R + GW PR+
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPRK 190
>gi|315042121|ref|XP_003170437.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
gi|311345471|gb|EFR04674.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
Length = 405
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 78 STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR- 133
ST+ P DP RTLF+ RL+ + +EADLE+ F +G + +R+V+D + K+
Sbjct: 86 STFNPSEDPQIRGDPFRTLFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTQNPNPKKP 145
Query: 134 ---YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ Y+ EK AA + + + +VD E GR + GWKPR
Sbjct: 146 HRGYAFIVYEREKDMKAAYKETDGIRIKDRRALVDVERGRTVKGWKPR 193
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 78 STYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+ ++PH + + DP +TLF+ R+N ++ E+ L + F +G + + +V + +TG + Y
Sbjct: 86 ALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRREFEVFGSIKKIVIVHNKITGKPRGY 145
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW PR
Sbjct: 146 AFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWLPR 189
>gi|401889211|gb|EJT53150.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 2479]
gi|406698908|gb|EKD02129.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 8904]
Length = 334
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 54 PIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAE 113
PI + G + + R + + YK + T P +TLFI RL+ + EADL F
Sbjct: 98 PIAEAGVIGQEAVMMRREAKKKQQKEYKENLEKTYPYKTLFISRLSSKATEADLRHEFEM 157
Query: 114 YGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLP 173
YG + +R+VRD G S+ Y F+ ++ E+ AA + + +I+VD E GR +
Sbjct: 158 YGHIEKIRIVRDKRKGKSRNYAFIVFERERDMKAAYKDADGIPIHHKKILVDVERGRTVK 217
Query: 174 GWKPR 178
GWKPR
Sbjct: 218 GWKPR 222
>gi|327292644|ref|XP_003231020.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326466826|gb|EGD92279.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 405
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR----YGFLEYDCEK 143
DP RTLF+ RL+ + +EADLE+ F +G + +R+V+D + K+ Y F+ Y+ EK
Sbjct: 99 DPFRTLFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREK 158
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + +VD E GR + GWKPR
Sbjct: 159 DMKAAYKETDGIRIKDRRALVDVERGRTVKGWKPR 193
>gi|169779457|ref|XP_001824193.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus oryzae
RIB40]
gi|238500103|ref|XP_002381286.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|83772932|dbj|BAE63060.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693039|gb|EED49385.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|391870271|gb|EIT79456.1| U1 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 379
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCE 142
DP +TLF+ RL+ + +E+DLE+ F +G + +R+V+D VT + Y F+ Y+ E
Sbjct: 99 DPFKTLFVSRLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYERE 158
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
K AA + + + ++VD E GR + GWKPR
Sbjct: 159 KDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 194
>gi|255724646|ref|XP_002547252.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135143|gb|EER34697.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 343
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP T+FI RL+ N E D+ +AFA+YG + S+R++RD G S+ YGF+ Y+ +
Sbjct: 119 DPLCTVFIARLDYNLTELDISKAFAKYGMIESIRIIRD-QNGKSRGYGFIVYERNTDAQS 177
Query: 148 AIRALNRQNFQ--GSEIIVDFECGRVLPGWKP 177
+ L R + I+VD E RVL WKP
Sbjct: 178 CVDELCRSGLKLGNRTILVDMERSRVLKNWKP 209
>gi|241951514|ref|XP_002418479.1| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
gi|223641818|emb|CAX43780.2| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 343
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+FI RL+ N E D+ +AFA YG + S++++RD G S+ YGF+ Y+ +A
Sbjct: 119 DPFRTVFIARLDYNLTELDISRAFARYGMIESIKIIRD-KQGKSRGYGFVVYERNPDAVA 177
Query: 148 AIRALNRQNFQ--GSEIIVDFECGRVLPGW 175
+ L+R + I+VD E RVL W
Sbjct: 178 CVNDLSRTGLKLGNRPILVDIERSRVLKNW 207
>gi|326480343|gb|EGE04353.1| U1 small nuclear ribonucleoprotein [Trichophyton equinum CBS
127.97]
Length = 406
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR----YGFLEYDCEK 143
DP RTLF+ RL+ + +EADLE+ F +G + +R+V+D + K+ Y F+ Y+ EK
Sbjct: 99 DPFRTLFVSRLSYDVKEADLEREFGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREK 158
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + +VD E GR + GWKPR
Sbjct: 159 DMKAAYKETDGIRIKDRRALVDVERGRTVKGWKPR 193
>gi|159478463|ref|XP_001697322.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Chlamydomonas reinhardtii]
gi|158274480|gb|EDP00262.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Chlamydomonas reinhardtii]
Length = 510
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
H RA++ + P + P LFI +LN + E DLE F+ +G V S ++RDF
Sbjct: 217 HHRAVVLEMVGDL-PDADAKPPPNMLFICKLNPVTSEEDLEIIFSRFGHVTSCDIIRDFK 275
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
TG S YGF+ +D ++AC AA +N + VDF
Sbjct: 276 TGDSLNYGFIGFDSDEACEAAYFKMNNAVIDDRRVRVDF 314
>gi|115399498|ref|XP_001215338.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192221|gb|EAU33921.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCE 142
DP +TLF+ RL+ + +E+DLE+ F +G + +R+V+D VT + Y F+ Y+ E
Sbjct: 99 DPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDNVTPKGSKKPHRGYAFIVYERE 158
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
K AA + + + ++VD E GR + GWKPR
Sbjct: 159 KDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 194
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ D +TLF+ ++ ++ E L + F +YG++ +R+V D + + Y F+EY+ E+
Sbjct: 109 NATGDAYKTLFVANMSYDTSEKKLRREFEQYGQIKKIRLVND-LEDQPRGYAFIEYEREE 167
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
A + + + ++VD E GR + W+PRR GGG G +R +
Sbjct: 168 DMHMAYKKADGRKVDSRRLLVDVERGRTVRNWRPRRFGGGLGESRKT 214
>gi|238882323|gb|EEQ45961.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 349
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+FI RL+ N E D+ +AFA YG + S+R++RD G S+ YGF+ Y+ +
Sbjct: 119 DPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRD-KQGKSRGYGFVVYERNTDAMN 177
Query: 148 AIRALNRQNFQ--GSEIIVDFECGRVLPGW 175
+ L+R + I+VD E RVL W
Sbjct: 178 CVNDLSRTGLKLGNRPILVDIERSRVLKNW 207
>gi|449542311|gb|EMD33290.1| hypothetical protein CERSUDRAFT_117917 [Ceriporiopsis subvermispora
B]
Length = 378
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
YKP + DP +TLF+ L K++ E D+ + F +G + VR+VRD G+S++Y F
Sbjct: 104 YKPQENPEVVGDPYKTLFVAHLPKHATENDVRREFERFGSLERVRIVRD-KRGNSRKYAF 162
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ ++ E+ AA ++ + G+ ++VD E GR + GWKPR
Sbjct: 163 VVFERERDMKAAFKSSDDIAVMGARVLVDVERGRTVRGWKPR 204
>gi|68486606|ref|XP_712797.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
gi|46434210|gb|EAK93626.1| hypothetical protein CaO19.6866 [Candida albicans SC5314]
Length = 305
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+FI RL+ N E D+ +AFA YG + S+R++RD G S+ YGF+ Y+ +
Sbjct: 77 DPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRD-KQGKSRGYGFVVYERNTDAMN 135
Query: 148 AIRALNRQNFQ--GSEIIVDFECGRVLPGW 175
+ L+R + I+VD E RVL W
Sbjct: 136 CVNDLSRTGLKLGNRPILVDIERSRVLKNW 165
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 78 STYKPHTSS---TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+ + PH+ + TDP +TLF+ R+N ++ E+ L + F YG + + V R+ + G + Y
Sbjct: 86 AAWNPHSDANAVTDPFKTLFVARINYDTSESKLRREFELYGLIKKIVVTRNKIDGKPRGY 145
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E R + GW PR
Sbjct: 146 AFIEYENERDMYSAYKYADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH DP +TLF+ RL+ + +E DLE+ F +G + +R+VRD + + Y F+ ++
Sbjct: 92 PHIRG-DPYKTLFVSRLSYDVKEQDLEREFGRFGPIDRIRLVRDKESKKPRGYAFILFER 150
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
EK AA + + + I VD E GR GWKPR
Sbjct: 151 EKDMKAAFKETDGMRIKDRRISVDVERGRTTKGWKPR 187
>gi|296816264|ref|XP_002848469.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841494|gb|EEQ31156.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 414
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR----YGFLEYDCEK 143
DP RTLF+ RL+ +EADLE+ F +G + +R+V+D + K+ Y F+ Y+ EK
Sbjct: 99 DPFRTLFVSRLSYEVKEADLEREFGRFGPIERIRIVKDTKNPNPKKPHRGYAFIVYEREK 158
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + +VD E GR + GWKPR
Sbjct: 159 DMKAAYKETDGIRIKDRRALVDVERGRTVKGWKPR 193
>gi|118356855|ref|XP_001011681.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila]
gi|89293448|gb|EAR91436.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila
SB210]
Length = 302
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
++DP +TL I ++ N E+ L++ F YG + S R++R+ H + YGF+E++ +
Sbjct: 188 TSDPYKTLLIFNISYNVNESKLKEHFKVYGPIKSCRIIRNQNQKH-RGYGFIEFERKNDF 246
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGN 187
++A + + + G I VD E GR + ++PRR GGG G +
Sbjct: 247 ISAYKNAHEKKIDGRRIGVDIERGRTILSFRPRRFGGGLGND 288
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 78 STYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+ ++PH+ ++TDP +TLF+ R+N ++ E+ L + F YG + + V + + G + Y
Sbjct: 86 ALWEPHSVANATTDPFKTLFVARINYDTSESKLRREFELYGPIKKIVVTHNKIDGKPRGY 145
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E R + GW PR
Sbjct: 146 AFIEYEYERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|169616568|ref|XP_001801699.1| hypothetical protein SNOG_11457 [Phaeosphaeria nodorum SN15]
gi|160703212|gb|EAT81165.2| hypothetical protein SNOG_11457 [Phaeosphaeria nodorum SN15]
Length = 341
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+EY
Sbjct: 145 PFAEVAPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIEYTN 204
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN 189
+K C A ++ I VDF R+ W K RR GG+GG N
Sbjct: 205 QKDCEQAYFKMDGVLIDDHRIHVDFSQSVSRIADDWRDVTNMKRRRAAGGFGGIDN 260
>gi|14028993|gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 491
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKV-------------------------- 117
++ DP +TLF+ RLN + E +++ F YG +
Sbjct: 132 NATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRQTSLKNVGDGTTYLQAWGFYILGF 191
Query: 118 --ISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGW 175
+ VR+V D T + Y F+EY + A + + + ++VD E GR +P W
Sbjct: 192 IRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGRTVPNW 251
Query: 176 KPRRLGGGWGGNRNSGQ 192
+PRRLGGG G +R G+
Sbjct: 252 RPRRLGGGLGSSRIGGE 268
>gi|410084527|ref|XP_003959840.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
gi|372466433|emb|CCF60705.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
Length = 285
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
++ +TDP +T+FIGRL N E +L++ F ++G++ +R+V+D T K YGF+ ++
Sbjct: 98 NSQNTDPYKTIFIGRLPYNVTEIELQKIFIKFGEIEKIRIVKDIKTDKPKGYGFILFNEA 157
Query: 143 KACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
A A+R + G IVD E GR + +KP
Sbjct: 158 NAAKMAVREIGTHRGIEINGRSCIVDIERGRSVKYFKP 195
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 33 DAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRT 92
D+KS++ + +K + I PI G ++R+ RA + P P+ T
Sbjct: 284 DSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRASKFGDTPSA----PSDT 339
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L+ N+ +L + F+EYG ++SVR+ T K +G+++Y AA+ AL
Sbjct: 340 LFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALEAL 399
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGG---GWGGNRNSGQLRFGGRNKPWVKPV 206
N + +G + +DF R R GG +GG+R S FGGR + P
Sbjct: 400 NGEYIEGRPVRLDFSAPR---DNSNRSFGGDRKSFGGDRKS----FGGRERKSFTPT 449
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLF+GRL+ + + L++ F G VIS RV+ + TG S+ YG++++D + A A++
Sbjct: 236 TLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDFDSKSAAEKALKE 295
Query: 152 LNRQNFQGSEIIVDFECGR 170
+ G I +D G+
Sbjct: 296 YQGREIDGRPINLDMSTGK 314
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP +TLF+ R+N ++ E+ L + F YG + + ++ D TG + Y F+EY+ E+
Sbjct: 96 ATEDPFKTLFVARINYDTSESKLRREFEIYGNIKKIIMINDKDTGKPRGYAFIEYEHERD 155
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + G ++VD E R + GW PR
Sbjct: 156 MHAAYKHADGKKIDGKRVLVDVERARTVKGWLPR 189
>gi|189197207|ref|XP_001934941.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980889|gb|EDU47515.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 509
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+EY
Sbjct: 274 PFAEVAPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIEYTN 333
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN 189
+K C A ++ I VDF ++ W K RR GG+GG N
Sbjct: 334 QKDCEQAYFKMDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGGIDN 389
>gi|330922608|ref|XP_003299903.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
gi|311326217|gb|EFQ91998.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+EY
Sbjct: 241 PFAEVAPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIEYTN 300
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN 189
+K C A ++ I VDF ++ W K RR GG+GG N
Sbjct: 301 QKDCEQAYFKMDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGGIDN 356
>gi|396481240|ref|XP_003841191.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
gi|312217765|emb|CBX97712.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
Length = 478
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+EY
Sbjct: 245 PFAEVAPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYAN 304
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN---S 190
+K C A ++ I VDF ++ W K +R GG+GG N
Sbjct: 305 QKDCEQAYFKMDGVLIDDHRIHVDFSQSVSKIADDWRDDANKKRKRAAGGFGGIDNLEKK 364
Query: 191 GQLRFGGR 198
Q R GGR
Sbjct: 365 RQYREGGR 372
>gi|195387576|ref|XP_002052470.1| GJ21434 [Drosophila virilis]
gi|194148927|gb|EDW64625.1| GJ21434 [Drosophila virilis]
Length = 454
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQDSGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|68486549|ref|XP_712825.1| hypothetical protein CaO19.14156 [Candida albicans SC5314]
gi|46434241|gb|EAK93656.1| hypothetical protein CaO19.14156 [Candida albicans SC5314]
Length = 233
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+FI RL+ N E D+ +AFA YG + S+R++RD G S+ YGF+ Y+ +
Sbjct: 3 DPFRTVFIARLDYNLTELDISRAFARYGMIESIRIIRD-KQGKSRGYGFVVYERNTDAMN 61
Query: 148 AIRALNRQNFQ--GSEIIVDFECGRVLPGW 175
+ L R + I+VD E RVL W
Sbjct: 62 CVNDLIRTGLKLGNRPILVDIERSRVLKNW 91
>gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
[Drosophila melanogaster]
Length = 448
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
F+EY+ E+ +A + + + G ++VD E GR + GW+PRRL
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRL 192
>gi|392577664|gb|EIW70793.1| hypothetical protein TREMEDRAFT_73567 [Tremella mesenterica DSM
1558]
Length = 335
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRALR---------STYKPHTSST---DPTRTLFIGRLNK 100
D I + G + I R LRA R + Y+P + DP +TLFI RL+
Sbjct: 105 DKISEMGVVGQEAIKMRRE-LRAKRKEQYKKDSEANYRPQDDTKAVGDPYKTLFISRLSS 163
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
+ E DL + F YG + +R+VR+ G S Y F+ Y+ E+ AA +
Sbjct: 164 KATEQDLRREFEMYGAIEHIRIVRNR-KGKSNSYAFIVYERERDMKAAYKDAEGIPIHHK 222
Query: 161 EIIVDFECGRVLPGWKPR 178
+I+VD E GR + GWKPR
Sbjct: 223 KILVDVERGRTVKGWKPR 240
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|194862752|ref|XP_001970105.1| GG23559 [Drosophila erecta]
gi|190661972|gb|EDV59164.1| GG23559 [Drosophila erecta]
Length = 448
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|195050851|ref|XP_001992981.1| GH13577 [Drosophila grimshawi]
gi|193900040|gb|EDV98906.1| GH13577 [Drosophila grimshawi]
Length = 465
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQDSGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|195471605|ref|XP_002088093.1| GE18384 [Drosophila yakuba]
gi|194174194|gb|EDW87805.1| GE18384 [Drosophila yakuba]
Length = 448
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|367017532|ref|XP_003683264.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
gi|359750928|emb|CCE94053.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
Length = 318
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ TDP RT+F+GRL + E +L++ F E+G++ VRVVRD + SK Y F+ +
Sbjct: 98 PNMKDTDPYRTIFVGRLPYDISEVELQRKFNEFGEIEKVRVVRDKINNQSKGYAFIVFTD 157
Query: 142 EKACLAAIR--ALNR-QNFQGSEIIVDFECGRVLPGWKP 177
++ +A + L+R +G IVD E GR + +KP
Sbjct: 158 PQSSKSACKEYGLHRGIEIKGRTCIVDIERGRTVKYFKP 196
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 54/94 (57%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP +TLFI R+N ++ E+ L + F YG + + ++ D +G + Y F+EY+ E+
Sbjct: 226 ATEDPFKTLFIARINYDTSESKLRREFEMYGNIKKIIMINDKNSGKPRGYAFIEYEHERD 285
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + G ++VD E R + GW PR
Sbjct: 286 MHAAYKHADGKKIDGKRVLVDVERARTVKGWLPR 319
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 MATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|195338817|ref|XP_002036020.1| GM13669 [Drosophila sechellia]
gi|194129900|gb|EDW51943.1| GM13669 [Drosophila sechellia]
Length = 448
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|307178414|gb|EFN67138.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Camponotus
floridanus]
Length = 81
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYK-PHTSSTDPTRTLFIGRLNKNSR 103
W PY Y+P++AGSIDGTDT PHD+AI RA+ Y+ PH + RTLF+ R N
Sbjct: 4 WSPYAKDYNPLKAGSIDGTDTEPHDKAISRAMLMHYEPPHNLESKSERTLFVARFGSNVT 63
Query: 104 EADLEQA 110
+ DL++
Sbjct: 64 KYDLKEV 70
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP RTLF+ R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 95 NATEDPFRTLFVARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|323455541|gb|EGB11409.1| hypothetical protein AURANDRAFT_14747, partial [Aureococcus
anophagefferens]
Length = 215
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD--------------FVTGH 130
++ D +TLF+ RL+ ++ E L + F ++G + ++RVV + G
Sbjct: 92 TTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGT 151
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
+ Y F+E++ E A + + + G ++VD E GR + W+PR+LGGG G R
Sbjct: 152 PRGYAFVEFERESDMRDAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRKR 211
Query: 191 G 191
G
Sbjct: 212 G 212
>gi|50294956|ref|XP_449889.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529203|emb|CAG62869.1| unnamed protein product [Candida glabrata]
Length = 299
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL---EY 139
H TDP +T+F+GRL ++ E L++ FA+YG+++ VRVVRD S+ Y F+ E
Sbjct: 107 HMRDTDPYKTVFVGRLPYDTDEVQLQKVFAKYGEIVRVRVVRD-KQNKSRGYAFVLFKET 165
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
D + C I G IVD E GR + +KP
Sbjct: 166 DSARVCTRDIGVHRGIQINGRRCIVDIERGRTIKFFKP 203
>gi|119174818|ref|XP_001239737.1| hypothetical protein CIMG_09358 [Coccidioides immitis RS]
gi|303314545|ref|XP_003067281.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106949|gb|EER25136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037587|gb|EFW19524.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869929|gb|EAS28470.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 395
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 69 DRAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
D+ + L+ TY P + DP +TLF+ RL+ + +EADLE+ F +G + +R+V D
Sbjct: 78 DKYLTEGLK-TYDPSSDPQVRGDPFKTLFVSRLSYDVKEADLEREFGRFGPIERIRIVTD 136
Query: 126 FVTGHSKR----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ K+ Y F+ Y+ E AA + + + ++VD E GR + GWKPR
Sbjct: 137 PSNTNPKKKHRGYAFIVYERELDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 193
>gi|451846305|gb|EMD59615.1| hypothetical protein COCSADRAFT_126954 [Cochliobolus sativus
ND90Pr]
Length = 481
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+EY
Sbjct: 245 PFAEVAPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYAN 304
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN 189
+K C A ++ I VDF ++ W K RR GG+GG N
Sbjct: 305 QKDCEQAYFKMDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGGIDN 360
>gi|365765125|gb|EHN06639.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
+ A + + +G IVD E GR + +KP
Sbjct: 158 PISSKMAFKEIGVHRGIQIKGRVCIVDIERGRTVKYFKP 196
>gi|451994412|gb|EMD86882.1| hypothetical protein COCHEDRAFT_1185111 [Cochliobolus
heterostrophus C5]
Length = 477
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+EY
Sbjct: 241 PFAEVAPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYAN 300
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN 189
+K C A ++ I VDF ++ W K RR GG+GG N
Sbjct: 301 QKDCEQAYFKMDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGGIDN 356
>gi|254570158|ref|XP_002492189.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031986|emb|CAY69909.1| hypothetical protein PAS_chr2-2_0449 [Komagataella pastoris GS115]
gi|328351324|emb|CCA37723.1| U1 small nuclear ribonucleoprotein 70 kDa [Komagataella pastoris
CBS 7435]
Length = 295
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +RT+F+ RL+ NS E DL+ + +G++ +RVVRD T SK YGF+ +
Sbjct: 119 DASRTIFVARLDYNSTEVDLQNSLGVFGEIDRIRVVRDVNTDKSKGYGFVVFKQPDDART 178
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
A R + ++VD E GR + WKPRRL
Sbjct: 179 AYRNSSSLKINNRPVLVDIERGRTVKNWKPRRL 211
>gi|323447116|gb|EGB03066.1| hypothetical protein AURANDRAFT_34517 [Aureococcus anophagefferens]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD--------------FVTGH 130
++ D +TLF+ RL+ ++ E L + F ++G + ++RVV + G
Sbjct: 38 TTGDAYKTLFVARLSYDTTEKKLRREFEQFGAIKALRVVHERDPDHEPMEGDDDALHAGT 97
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
+ Y F+E++ E A + + + G ++VD E GR + W+PR+LGGG G R
Sbjct: 98 PRGYAFVEFERESDMRDAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRKR 157
Query: 191 G 191
G
Sbjct: 158 G 158
>gi|344302784|gb|EGW33058.1| hypothetical protein SPAPADRAFT_60375 [Spathaspora passalidarum
NRRL Y-27907]
Length = 302
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+FI RL+ + E D+ AF++YG + S+R++RD G S+ YGF+ ++
Sbjct: 108 DPYRTVFIARLDYSVTELDISSAFSKYGVIESIRIIRD-KNGKSRGYGFIVFERTNDAKN 166
Query: 148 AIRALNRQN--FQGSEIIVDFECGRVLPGWKP 177
+ L R + +VDFE GR++ WKP
Sbjct: 167 CVNELCRSGILLKNRHALVDFERGRIIRNWKP 198
>gi|307193764|gb|EFN76445.1| U1 small nuclear ribonucleoprotein 70 kDa [Harpegnathos saltator]
Length = 239
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + V G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTVNGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|302851241|ref|XP_002957145.1| hypothetical protein VOLCADRAFT_67884 [Volvox carteri f.
nagariensis]
gi|300257552|gb|EFJ41799.1| hypothetical protein VOLCADRAFT_67884 [Volvox carteri f.
nagariensis]
Length = 332
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
H RA++ + P + P LFI +LN + E DLE F+ +G+V S ++RD+
Sbjct: 222 HHRAVVLEMVGDL-PDADAKPPPNMLFICKLNPVTSEEDLEIIFSRFGRVTSCDIIRDWK 280
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
TG S YGF+ +D ++AC AA +N + VDF
Sbjct: 281 TGDSLNYGFIGFDSDEACEAAYFKMNNAVIDDRRVRVDF 319
>gi|168016855|ref|XP_001760964.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687973|gb|EDQ74353.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 388
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + E DLE F +GKV S ++RD+ TG S Y F+E++
Sbjct: 231 PEADMKPPENVLFVCKLNPVTEEGDLELIFGRFGKVKSADIIRDYKTGDSLCYAFIEFET 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGW-KPRRLGGGWGGNRNSGQ 192
E+AC AA ++ I VDF V W + R+LG G N G+
Sbjct: 291 EEACEAAYFKMDNVLIDDRRIHVDFS-QSVSHLWNRYRKLGKAGGDAANGGK 341
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + + G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + + G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|195577191|ref|XP_002078456.1| GD22521 [Drosophila simulans]
gi|194190465|gb|EDX04041.1| GD22521 [Drosophila simulans]
Length = 348
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP RTLFI R+N ++ E+ L + F YG + + ++ D +G K Y F+EY+ E+
Sbjct: 96 ATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERD 155
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E R + GW PR
Sbjct: 156 MHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189
>gi|401625267|gb|EJS43283.1| snp1p [Saccharomyces arboricola H-6]
Length = 300
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 52 YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAF 111
Y+ +++ I + I DR L++ PH TDP RT+FIGRL N E +L++ F
Sbjct: 71 YEDVKSSKIKNSQLI--DRR-LQSWNPNVDPHIKDTDPYRTIFIGRLPYNINEIELQKHF 127
Query: 112 AEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEI-----IVDF 166
+G++ +R+V+D T SK Y F+ + + A + + +G +I IVD
Sbjct: 128 VRFGEIQKIRIVKDRTTQQSKGYAFIVFKDPISSKMAFKEIGVH--RGIQIEDRICIVDI 185
Query: 167 ECGRVLPGWKP 177
E GR + +KP
Sbjct: 186 ERGRTVKYFKP 196
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + + G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + + G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNTINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ TDP +T+F+GRL ++ E +L++ F+++G + +RVVRD VT SK Y F+ +
Sbjct: 98 PNIKETDPFKTIFVGRLPYDTTEMELQREFSKFGDIERIRVVRDKVTNKSKGYAFVLFTN 157
Query: 142 EKACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
++ A + + +G IVD E GR + +KP
Sbjct: 158 PQSSRMACKEIGIHRGLEIKGRIAIVDIERGRTIKYFKP 196
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V+ + + G + Y F+EY+ E+
Sbjct: 97 TVDPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVIHNSINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|366993981|ref|XP_003676755.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
gi|342302622|emb|CCC70398.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
Length = 321
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ TDP RT+FIGRL ++ E +L++ F ++G++ +R+VRD +T SK Y F+ +
Sbjct: 97 PNIKDTDPYRTIFIGRLPYDTTELELQKLFVKFGEIEKIRIVRDKLTNKSKGYAFIVFLD 156
Query: 142 EKACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
+ A + + + +G IVD E R + +KP
Sbjct: 157 PMSSKMAFKEIGVHRGIDIKGRTCIVDIERSRTMKYFKP 195
>gi|399218189|emb|CCF75076.1| unnamed protein product [Babesia microti strain RI]
Length = 331
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLFIG L + E L F YGK+ +R++ D G+ + Y F+E+D E+ +
Sbjct: 95 DPYKTLFIGNLAYEATERQLRSEFEAYGKIKRIRIIAD-ANGNPRGYAFIEFDTEREMVN 153
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G +IVD E R + GW PR
Sbjct: 154 AYKRGDGRKIAGRRVIVDVERSRTVAGWLPR 184
>gi|354543650|emb|CCE40371.1| hypothetical protein CPAR2_104090 [Candida parapsilosis]
Length = 302
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+FI RL+ E D+ Q F +YG + S+ ++RD G S+ YGF+ ++ E A
Sbjct: 114 DPYKTVFIARLDYTLTELDISQYFRKYGVIDSISIIRDH-NGRSRGYGFIVFEREADAQA 172
Query: 148 AIRALNRQNFQGSE--IIVDFECGRVLPGWKP 177
I L+R + E I+VD E RV WKP
Sbjct: 173 CISELSRTGVKMKERTILVDVERSRVWRNWKP 204
>gi|50305197|ref|XP_452557.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641690|emb|CAH01408.1| KLLA0C08019p [Kluyveromyces lactis]
Length = 301
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE---YDCE 142
S+DP RTLF+GRL+ E +L+++F +YG + S R+VRD G S+ YGF++ Y+
Sbjct: 110 SSDPYRTLFVGRLHYAVDEVELQKSFVKYGDIESCRIVRD-QDGKSRGYGFVQFTSYEDS 168
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
K C + G IVD E GR + +KP
Sbjct: 169 KQCFRELGVRKGIEIMGRTSIVDIERGRTVKFFKP 203
>gi|260942821|ref|XP_002615709.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
gi|238850999|gb|EEQ40463.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+F+ RL + E DL + F +YG + S+R++R+ TG S+ YGF+ ++ E
Sbjct: 115 DPYKTVFVARLYYSLTELDLSKHFTKYGTIESIRIIRNTETGQSRGYGFIVFEREADAKN 174
Query: 148 AIRALNRQNF---------QGSEIIVDFECGRVLPGWKP 177
IR L+ + +I+VD E GR++ W+P
Sbjct: 175 CIRELSPTGLSIDPPSSESKPRKILVDMERGRLVRNWRP 213
>gi|108742141|gb|AAI17603.1| Snrnp70 protein [Danio rerio]
Length = 339
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH + D +TLF+ R+N ++ E+ L + F YG + + +V + TG + Y F
Sbjct: 89 WDPHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGKPRGYAF 148
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
+EY+ E+ +A + + + G ++VD E GR + GW+P L G
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPGDLVG 194
>gi|332017705|gb|EGI58383.1| U1 small nuclear ribonucleoprotein 70 kDa [Acromyrmex echinatior]
Length = 405
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG V + V + + G + Y F+EY+ E+
Sbjct: 97 TADPFKTLFVARINYDTSESKLRREFEVYGPVKKIVVTHNTINGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|156085230|ref|XP_001610098.1| u1 snRNP [Babesia bovis T2Bo]
gi|154797350|gb|EDO06530.1| u1 snRNP, putative [Babesia bovis]
Length = 247
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
+D A+ R + + H DP +TLF+ + E L + F YG+V +R++ D
Sbjct: 88 YDPALARGATNPWLTH----DPYKTLFVSNIPYEVTEKQLWKEFDVYGRVRRIRMIND-R 142
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGN 187
+ Y F+EY+ E+ + A + + + G ++VD E R + GW P+RLGGG G +
Sbjct: 143 KNIPRGYAFIEYNDERDMVNAYKRADGRKVSGRRVLVDVERARTVAGWYPKRLGGGKGRS 202
Query: 188 R 188
R
Sbjct: 203 R 203
>gi|221126649|ref|XP_002157902.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Hydra
magnipapillata]
Length = 351
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 78 STYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+++ PHT +S DP +TLF+ R+N ++ E+ L + +G + + +V +FV + Y
Sbjct: 85 ASWDPHTDPNASGDPFKTLFVARINYDTTESKLRRELETHGPIRKIHMVYNFVKRKPRGY 144
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGW 175
F+E++ E+ AA + + + G I+VD E GR + W
Sbjct: 145 AFVEFEHERDMQAAFKHSDGKKIDGRRIVVDVERGRTVKSW 185
>gi|371776952|ref|ZP_09483274.1| RNP-1 like RNA-binding protein [Anaerophaga sp. HS1]
Length = 100
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
LF+ +L+ + DL + FAEYG+V+S +V+ D TG SKR+GF+E E A + AI+
Sbjct: 2 NLFVAKLSAATTSDDLNELFAEYGEVVSAKVIMDRETGTSKRFGFVEMKDEAAAMKAIKD 61
Query: 152 LNRQNFQGSEIIV 164
LN F S I+V
Sbjct: 62 LNECLFDNSPIVV 74
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ L++G L + R+ DLEQAF E+G ++S +V+ + TG SK +GF+E + LAAI
Sbjct: 3 KKLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIE 62
Query: 151 ALNRQNFQGSEIIVD 165
A+N + QG + V+
Sbjct: 63 AMNGHSLQGRALTVN 77
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ L++G L + R+ DLEQAF E+G ++S +V+ + TG SK +GF+E + LAAI
Sbjct: 3 KKLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAIE 62
Query: 151 ALNRQNFQGSEIIVD 165
A+N + QG + V+
Sbjct: 63 AMNGHSLQGRALTVN 77
>gi|167382928|ref|XP_001736333.1| U1 small nuclear ribonucleoprotein 70 kDa [Entamoeba dispar SAW760]
gi|165901504|gb|EDR27587.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
dispar SAW760]
Length = 422
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ +P RT+ + RL K + E+ L+Q F EYG++ + +++D + G +K Y F+EY+
Sbjct: 100 ATDNPNRTIVVLRLPKKTDESILQQLFGEYGEIKKIVIIKD-LKGINKGYAFVEYNHRSE 158
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG------GWGGNRNSGQLR 194
A R N + I+V+ E GR +KP+RLGG G RN +R
Sbjct: 159 AERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTIERRRGEDKRRNESPIR 214
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 77 RSTYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
+ YKP + DP +TLFI RL+K E DL++ F YG + +R+VRD S+
Sbjct: 96 KDNYKPSEDPHAQGDPYKTLFISRLSKKVTEKDLQKEFERYGDIEQIRLVRD-PQARSRG 154
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ Y+ E+ AA + G I+VD E GR + GW+PR
Sbjct: 155 YAFVVYERERDMKAAYKDAEGLVLLGKRILVDVERGRTVRGWRPR 199
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ DP +TLF+ R+N ++ E+ L + F YG + + ++ + V G + Y F+EY+ E+
Sbjct: 97 TVDPFKTLFVARINYDTSESKLRREFEVYGPIKKIVLIHNSVNGKPRGYAFIEYEHERDM 156
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + G ++VD E R + GW PR
Sbjct: 157 HSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|307103843|gb|EFN52100.1| hypothetical protein CHLNCDRAFT_56335 [Chlorella variabilis]
Length = 417
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
H+RA++ + P + P LFI +LN + E DLE F+ +G + S ++RD+
Sbjct: 217 HNRAVVLEMIGDL-PEADAKPPPNMLFICKLNPVTTEEDLEIIFSRFGTITSCDIIRDWK 275
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
TG S YGF+ +D E++C A +N I VDF
Sbjct: 276 TGDSLNYGFIGFDSEESCEQAYFKMNNVLIDDRRIKVDF 314
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ + +DP RT+F+GRL E +L++ F +G++ VRVVRD + S+ YGF+ +
Sbjct: 93 PNIADSDPYRTIFVGRLPFAVTEVELQKEFVRFGEIEKVRVVRDKTSNKSRGYGFIMFKD 152
Query: 142 EKACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
E + +A R + G +IVD E GR + + P
Sbjct: 153 EISARSACREIGVHRGVQIGGRPVIVDIERGRTVKYFTP 191
>gi|323304496|gb|EGA58262.1| Snp1p [Saccharomyces cerevisiae FostersB]
Length = 300
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
+ A + + + IVD E GR + +KP
Sbjct: 158 PISSKMAFKEIGVHRGIQIKDRXCIVDIERGRTVKYFKP 196
>gi|67541466|ref|XP_664507.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|40739112|gb|EAA58302.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|259480504|tpe|CBF71696.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa (AFU_orthologue;
AFUA_5G13480) [Aspergillus nidulans FGSC A4]
Length = 373
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 78 STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR- 133
+ Y P++ DP +TLF+ RL+ + E DLE+ F +G + +R+V+D VT +
Sbjct: 86 AAYDPNSDPQARGDPFKTLFVSRLSYEATEQDLEREFGRFGPIERIRIVKDTVTPKGAKK 145
Query: 134 ----YGFLEYDCEKAC------LAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
Y F+ Y+ EK LAA + + + ++VD E GR + GWKP
Sbjct: 146 PHRGYAFIVYEREKDMKDLIHKLAAYKETDGIRIKDRRVLVDVERGRTVKGWKP 199
>gi|399108266|gb|AFP20557.1| RNA-binding protein [uncultured bacterium]
Length = 114
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G LN + A+LEQ FA YG V SV+V+ D TG SK +GF+E + AA+ AL
Sbjct: 5 LYVGNLNYRTNSAELEQLFAAYGTVKSVQVISDRHTGQSKGFGFVEMGSAQEAQAAMNAL 64
Query: 153 NRQNFQGSEIIVD 165
N ++F G + V+
Sbjct: 65 NGKDFNGRNLTVN 77
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ L++G L + R+ DLEQAF E+G ++S +V+ + TG SK +GF+E + LAA+
Sbjct: 3 KKLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAVE 62
Query: 151 ALNRQNFQGSEIIVD 165
A+N + QG + V+
Sbjct: 63 AMNGHSLQGRALTVN 77
>gi|340502463|gb|EGR29151.1| u1 small nuclear ribonucleoprotein 70 kda, putative
[Ichthyophthirius multifiliis]
Length = 464
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
++DP +TL + ++ N+ E +++ F YG + S R++R+ H + YG +E++
Sbjct: 202 TSDPYKTLVLNNISYNANEQKIKEHFKMYGPIKSCRIIRNLNQKH-RGYGIIEFERTADF 260
Query: 146 LAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+ A + + + G I VD E GR + ++P RLGGG G R
Sbjct: 261 IQAYKNAHEKKIDGRRIGVDIERGRTILRFRPMRLGGGLGITR 303
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S+ P LF+G ++ N+ E L AF++YG+V+ R++ D +G SK +GF+ Y+ +
Sbjct: 39 SSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEA 98
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
+AI+AL+ Q+ G + V+F
Sbjct: 99 SSAIQALDGQDLYGRRVGVNF 119
>gi|353241024|emb|CCA72864.1| related to SNP1-U1 small nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 362
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +TLF+ RL K + E DL + F +G + +++V++ G+S+ Y F+ Y+ E+
Sbjct: 116 DPYKTLFVARLPKKATENDLRREFEMFGVIARIKIVKN-KNGNSRGYAFIVYERERDMKV 174
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + G I+VD E GR + GWKPR
Sbjct: 175 AYKEGEHMQLLGKRILVDVERGRTVRGWKPR 205
>gi|367039335|ref|XP_003650048.1| hypothetical protein THITE_2109253 [Thielavia terrestris NRRL 8126]
gi|346997309|gb|AEO63712.1| hypothetical protein THITE_2109253 [Thielavia terrestris NRRL 8126]
Length = 504
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + E LE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 244 PFAEVKPPENVLFVCKLNPITNEEGLELIFSRFGKILSCEVIRDRKTGDSLQYAFIEFED 303
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----------PRRLGGGWGGNRN 189
+K+C A +++ I VDF R+ W+ R GGGWGG +
Sbjct: 304 KKSCEEAYSKMDQVLIDDRRIHVDFSQSVSRLSEVWRNETNAKRKKAAMRDGGGWGGVKE 363
Query: 190 SGQLRFGGRNKP 201
+ R RN+P
Sbjct: 364 LEKRR-QYRNEP 374
>gi|6322128|ref|NP_012203.1| Snp1p [Saccharomyces cerevisiae S288c]
gi|266985|sp|Q00916.1|RU17_YEAST RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein SNP1; Short=U1 snRNP protein SNP1
gi|4504|emb|CAA42602.1| U1 snRNP 70K protein homologue [Saccharomyces cerevisiae]
gi|557808|emb|CAA86162.1| snp1 [Saccharomyces cerevisiae]
gi|45270060|gb|AAS56411.1| YIL061C [Saccharomyces cerevisiae]
gi|151943102|gb|EDN61437.1| U1 70K [Saccharomyces cerevisiae YJM789]
gi|285812590|tpg|DAA08489.1| TPA: Snp1p [Saccharomyces cerevisiae S288c]
gi|349578892|dbj|GAA24056.1| K7_Snp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 300
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQNFQGSEI-----IVDFECGRVLPGWKP 177
+ A + + +G +I IVD E GR + +KP
Sbjct: 158 PISSKMAFKEIGVH--RGIQIKDRICIVDIERGRTVKYFKP 196
>gi|256269775|gb|EEU05041.1| Snp1p [Saccharomyces cerevisiae JAY291]
Length = 300
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQNFQGSEI-----IVDFECGRVLPGWKP 177
+ A + + +G +I IVD E GR + +KP
Sbjct: 158 PISSKMAFKEIGVH--RGIQIKDRVCIVDIERGRTVKYFKP 196
>gi|190406278|gb|EDV09545.1| hypothetical protein SCRG_05237 [Saccharomyces cerevisiae RM11-1a]
gi|207344323|gb|EDZ71507.1| YIL061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147197|emb|CAY80450.1| Snp1p [Saccharomyces cerevisiae EC1118]
gi|323333165|gb|EGA74565.1| Snp1p [Saccharomyces cerevisiae AWRI796]
gi|323337193|gb|EGA78447.1| Snp1p [Saccharomyces cerevisiae Vin13]
gi|392298660|gb|EIW09756.1| Snp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 300
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQNFQGSEI-----IVDFECGRVLPGWKP 177
+ A + + +G +I IVD E GR + +KP
Sbjct: 158 PISSKMAFKEIGVH--RGIQIKDRVCIVDIERGRTVKYFKP 196
>gi|323354596|gb|EGA86432.1| Snp1p [Saccharomyces cerevisiae VL3]
Length = 300
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQNFQGSEI-----IVDFECGRVLPGWKP 177
+ A + + +G +I IVD E GR + +KP
Sbjct: 158 PISSKMAFKEIGVH--RGIQIKBRVCIVDIERGRTVKYFKP 196
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 80 YKPH---TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
YKPH ++ D +TLF+ RL + E DL + F YG + ++R+VRD G S+ Y F
Sbjct: 116 YKPHDNAEATPDAYKTLFLARLAYDVTEKDLHREFDMYGPIETIRLVRD-REGKSRGYAF 174
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+ Y+ E+ AA + G ++VD E GR + WKP RL
Sbjct: 175 IAYERERDMRAAWKDAEGIKINGRRVMVDVERGRTVKDWKPTRL 218
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQAF+++G V S RV+ + TG SK +GF+E E AAI+ +
Sbjct: 5 LYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGM 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
N Q G ++V+ E + P +P R GG GG R+
Sbjct: 65 NGQPLGGRSLVVN-EARPMEP--RPPRTGGYGGGFRS 98
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%)
Query: 80 YKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY 139
YK DP +T+ + RL+ + E L++ F YG + VR++ D +G K Y F+EY
Sbjct: 109 YKDQKIKGDPFKTIVVSRLSYKTDEKTLKKEFEVYGPIKRVRIIIDQHSGKPKGYAFIEY 168
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
D E+ A+ N + G+ ++VD+E GR W PRRL
Sbjct: 169 DNERDFQLALERGNGRRVDGARVVVDYERGRTKTDWIPRRL 209
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP +TLFI R+N + E L + F +YG + V ++ ++ + Y F+EY E+
Sbjct: 96 ATADPFKTLFIARINYETSEGKLRREFEQYGAIKQVSLIHSSISNKPRGYAFIEYAHERD 155
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
AA + + + ++VD E GR + GW PR
Sbjct: 156 MHAAYKHADGKKIDSRRVLVDVERGRTVKGWLPR 189
>gi|219112155|ref|XP_002177829.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410714|gb|EEC50643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLFIGRL E L + +G V +R+++D G S+ Y F+EY+ E+ A RA
Sbjct: 99 TLFIGRLAYEVTERKLLREMESFGPVKDIRIIKDSKEGKSRGYAFVEYEHEEDMKRAYRA 158
Query: 152 LNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ +G EI+VD E G +P W PR
Sbjct: 159 ADGIRIEGREIVVDVERGHTVPSWLPR 185
>gi|401839251|gb|EJT42547.1| SNP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 52 YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAF 111
Y+ ++ I + I DR L++ PH TDP RT+FIGRL + E +L++ F
Sbjct: 71 YEDVKVSKIKNSHLI--DRK-LQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHF 127
Query: 112 AEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQ---NFQGSEIIVDFEC 168
+G++ +R+V+D +T S+ Y F+ + + A + + + IVD E
Sbjct: 128 VRFGEIEKIRIVKDKITQQSRGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIER 187
Query: 169 GRVLPGWKP 177
GR + +KP
Sbjct: 188 GRTVKYFKP 196
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQAF ++G V S RV+ + TG SK +GF+E E AAI+ +
Sbjct: 5 LYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGM 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
N Q G ++V+ E + P +P R GG GG R+
Sbjct: 65 NGQPLGGRSLVVN-EARPMEP--RPPRTGGYGGGFRS 98
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++ DP +TLF+ RLN S E+ +++ F YG + V +V D +T K Y F+EY +
Sbjct: 25 NATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTR 84
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
AA + + + E + +E P +PRRLGG G +R G G +P
Sbjct: 85 DMKAAYKQADDKRLTAEEFWLMWER-ENRPKLRPRRLGGELGTSRVGGGEEIAGEQQP 141
>gi|365760179|gb|EHN01919.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 52 YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAF 111
Y+ ++ I + I DR L++ PH TDP RT+FIGRL + E +L++ F
Sbjct: 71 YEDVKVSKIKNSHLI--DRK-LQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHF 127
Query: 112 AEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQ---NFQGSEIIVDFEC 168
+G++ +R+V+D +T S+ Y F+ + + A + + + IVD E
Sbjct: 128 VRFGEIEKIRIVKDKITQQSRGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIER 187
Query: 169 GRVLPGWKP 177
GR + +KP
Sbjct: 188 GRTVKYFKP 196
>gi|358390013|gb|EHK39419.1| hypothetical protein TRIATDRAFT_175778, partial [Trichoderma
atroviride IMI 206040]
Length = 402
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTQDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPR-------RLGGGWGG 186
+ +C AA + I VDF ++ W+ R GGWGG
Sbjct: 302 KASCEAAYSKMQDVLIDDRRIHVDFSQSVSKLSDVWRSDTNSKRRARARGGWGG 355
>gi|371777269|ref|ZP_09483591.1| RNP-1 like RNA-binding protein [Anaerophaga sp. HS1]
Length = 92
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ +L+ ++ DLEQ F+E+G+V S +V+ D TG+SKR+GF+E + AI L
Sbjct: 3 IFVAKLSARTKSEDLEQLFSEFGEVSSAKVIMDRATGYSKRFGFVEMPNDDEAQTAIDNL 62
Query: 153 NRQNFQGSEIIV 164
+ + F GS I+V
Sbjct: 63 DDKEFDGSRIVV 74
>gi|452819521|gb|EME26578.1| U1 small nuclear ribonucleoprotein 70kDa [Galdieria sulphuraria]
Length = 259
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+++D +TLFI RL + + L+ +GKV +++ TG K Y F+E+ E+
Sbjct: 113 ATSDAQKTLFIARLKPETTQLKLQAELEAFGKVKEIKLPISQKTGLPKGYAFVEFQKERD 172
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
A+RAL + G+ +IVD E R W P++L
Sbjct: 173 MREALRALEGKRIDGARVIVDVEKARTTKNWLPKKL 208
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQAF+++G V S RV+ + TG SK +GF+E E AAI+ +
Sbjct: 5 LYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGM 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
N Q G ++V+ E + P +P R GG GG R+
Sbjct: 65 NGQPLGGRSLVVN-EARPMEP--RPPRSGGYGGGFRS 98
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQAF+++G V S RV+ + TG SK +GF+E E AAI+ +
Sbjct: 5 LYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGM 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
N Q G ++V+ E + P +P R GG GG R+
Sbjct: 65 NGQPLGGRSLVVN-EARPMEP--RPPRSGGYGGGFRS 98
>gi|400599871|gb|EJP67562.1| peptidyl-prolyl cis-trans isomerase cyp6 [Beauveria bassiana ARSEF
2860]
Length = 382
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EYD
Sbjct: 242 PFAEVRPPENVLFVAKLNPVTADEDLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYDE 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C A + I VDF R+ W+ RR GGWGG
Sbjct: 302 KASCETAYFKMQGVLIDDRRIHVDFSQSVSRISDVWRKNANNKRRANASRGGWGG 356
>gi|302901262|ref|XP_003048399.1| hypothetical protein NECHADRAFT_95831 [Nectria haematococca mpVI
77-13-4]
gi|256729332|gb|EEU42686.1| hypothetical protein NECHADRAFT_95831 [Nectria haematococca mpVI
77-13-4]
Length = 483
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW-----KPRRLG---GGWGGNR 188
+ +C AA + I VDF ++ W K RR GGWGG R
Sbjct: 302 KASCEAAYFKMQDVLIDDRRIHVDFSQSVSKLSDSWRNDTNKKRRANAGRGGWGGVR 358
>gi|121714030|ref|XP_001274626.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
gi|119402779|gb|EAW13200.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
Length = 377
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-Y 134
Y P S DP RTLF+ RL+ + +EADLE+ F +G + V V + R Y
Sbjct: 87 VYDPSNDSQARGDPFRTLFVARLSYDVKEADLEREFGRFGPIERVHTVTPKGSKKPHRGY 146
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+ Y+ EK AA + + + ++VD E GR + GWKPR
Sbjct: 147 AFIVYEREKDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 190
>gi|330845520|ref|XP_003294630.1| hypothetical protein DICPUDRAFT_93253 [Dictyostelium purpureum]
gi|325074872|gb|EGC28844.1| hypothetical protein DICPUDRAFT_93253 [Dictyostelium purpureum]
Length = 203
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY-----GFLE 138
T+ T P +F+G L KN + +LE+AFAE+GKV+SVR++ SKRY GF++
Sbjct: 6 TNPTTPAFRIFVGNLTKNVEKEELEKAFAEFGKVLSVRII-------SKRYQENTFGFVD 58
Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGR 198
+ + AI A+N + G + V E R KP+R NR +
Sbjct: 59 MEDLEVANKAIAAVNGKEIDGKAVTV--ELARERSTEKPKRTSTRRNSNRGPRRTTRPAT 116
Query: 199 NKPWV 203
N+P V
Sbjct: 117 NQPVV 121
>gi|171676523|ref|XP_001903214.1| hypothetical protein [Podospora anserina S mat+]
gi|170936328|emb|CAP60986.1| unnamed protein product [Podospora anserina S mat+]
Length = 556
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 237 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFED 296
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----------PRRLGGGWGG 186
+K+C A ++ I VDF R+ W+ R+ GGWGG
Sbjct: 297 KKSCEEAYYKMDSVLIDDRRIHVDFSQSVSRLSEVWRNDTNTKRKTAAARKWKGGWGG 354
>gi|399216253|emb|CCF72941.1| unnamed protein product [Babesia microti strain RI]
Length = 277
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ + P LF+ +LN + DL+ F+ +G ++S VV+D+ TG S +Y F+E++
Sbjct: 63 PNADAKPPNNVLFVCKLNSVTEAEDLKIIFSRFGTILSCNVVKDYKTGESLQYAFIEFEK 122
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGN 187
E++C A + I VDF C + WK + G G+
Sbjct: 123 EESCTDAYFKMENVLIDDRRIHVDF-CQSIPTLWKKYKAGNITKGD 167
>gi|242003896|ref|XP_002422903.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
Length = 309
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 78 STYKPHT---SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+ + PH ++ DP +TLF+ R+N ++ E L + F YG + + V + + G + Y
Sbjct: 86 AVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRREFEVYGPIKKIVVSHNTINGKPRGY 145
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E R + GW PR
Sbjct: 146 AFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERARTVKGWLPR 189
>gi|384872281|gb|AFI25171.1| peptidyl-prolyl cis-trans isomerase [Beauveria bassiana]
Length = 481
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EYD
Sbjct: 242 PFAEVRPPENVLFVAKLNPVTADEDLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYDE 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C A + I VDF R+ W+ RR GGWGG
Sbjct: 302 KASCETAYFKMQGVLIDDRRIHVDFSQSVSRISDVWRKNANNKRRANASRGGWGG 356
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus milii]
Length = 136
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R LF+G LN N+ E LE+ F+EYG+V VR++RD TG S+ +GF+ ++ A+
Sbjct: 5 RKLFVGGLNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALT 64
Query: 151 ALNRQNFQGSEIIVD 165
++N ++ +G +I VD
Sbjct: 65 SMNGRSLEGRQIRVD 79
>gi|300175328|emb|CBK20639.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLFIG L+ ++E L + +YG + S+ +V+D G S+ Y F+EY A +
Sbjct: 3 TLFIGNLSYLTQENRLRELCEKYGPIESLVIVKDH-DGKSRGYAFVEYTYSNDMTTAYKR 61
Query: 152 LNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNS 190
L R ++IVD E GR + W P RLGGG G R +
Sbjct: 62 LRRHPLDERKLIVDVERGRTVRKWLPARLGGGLGKTRAT 100
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T +++G L+ N+ + L +AF++YG+V+ V+RD TG S+ +GF+ + E AI
Sbjct: 2 TAKVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAI 61
Query: 150 RALNRQNFQGSEIIVDFECGRVLP 173
ALN Q F+G I V+F R P
Sbjct: 62 SALNEQEFEGRRIKVNFANARPQP 85
>gi|242093876|ref|XP_002437428.1| hypothetical protein SORBIDRAFT_10g026940 [Sorghum bicolor]
gi|241915651|gb|EER88795.1| hypothetical protein SORBIDRAFT_10g026940 [Sorghum bicolor]
Length = 559
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 25 SSQTVEPRDAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHT 84
+S T +PRD + + + W P T DP Q + + + IL +L P
Sbjct: 179 NSPTGKPRD-EVAEERLEDTWVPLDQTVDPEQLEEMIRSKEAHTNAVILESLADI--PDA 235
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
P LF+ +LN +++ DL F+ +G V S ++RD+ TG S Y F+E+D ++A
Sbjct: 236 EIKPPENVLFVCKLNPVTQDEDLYTIFSRFGTVTSAEIIRDYKTGDSLCYAFIEFDTKEA 295
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
C A ++ I VDF
Sbjct: 296 CERAYFKMDNCLIDDRRIHVDF 317
>gi|340055500|emb|CCC49819.1| putative U1 small nuclear ribonucleoprotein [Trypanosoma vivax
Y486]
Length = 295
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
+DP T+ + L+ + E D+ ++G+V+SVR++ DF G S+RYGF+E+ E+
Sbjct: 131 SDPWCTVVVSNLHPKTLEEDIRLFCEQFGRVVSVRLIFDF-KGRSRRYGFVEFGREEDAR 189
Query: 147 AAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
AI +++ G ++VD E GR P + PRR+
Sbjct: 190 RAIANTSKKRLHGRAVVVDKERGRQQPNFLPRRMA 224
>gi|357122647|ref|XP_003563026.1| PREDICTED: uncharacterized protein LOC100823440 [Brachypodium
distachyon]
Length = 644
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P R LF+ + + E DLE+ FA+YG+V SVRVVRD TG S+ +GFL + ++ AA
Sbjct: 561 PGRNLFVAGFSYATTERDLEKKFAKYGRVTSVRVVRDKRTGDSRGFGFLCLEKDEDADAA 620
Query: 149 IRALNRQNFQGSEIIVD 165
I+A + + G I+V+
Sbjct: 621 IQACDETEWNGRIILVE 637
>gi|302802690|ref|XP_002983099.1| hypothetical protein SELMODRAFT_117459 [Selaginella moellendorffii]
gi|300149252|gb|EFJ15908.1| hypothetical protein SELMODRAFT_117459 [Selaginella moellendorffii]
Length = 348
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
H RA++ + P P LF+ +LN +++ DLE F +GKVIS ++RD
Sbjct: 219 HTRAVVLEMVGDI-PDAEVRPPDNVLFVCKLNPTTQDEDLEVIFQRFGKVISADIIRDHK 277
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
TG S YGF+E++ ++C AA ++ I VDF
Sbjct: 278 TGDSLCYGFVEFEARESCEAAYFKMDNVLIDDRRIHVDF 316
>gi|302764854|ref|XP_002965848.1| hypothetical protein SELMODRAFT_84140 [Selaginella moellendorffii]
gi|300166662|gb|EFJ33268.1| hypothetical protein SELMODRAFT_84140 [Selaginella moellendorffii]
Length = 349
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
H RA++ + P P LF+ +LN +++ DLE F +GKVIS ++RD
Sbjct: 219 HTRAVVLEMVGDI-PDAEVRPPDNVLFVCKLNPTTQDEDLEVIFQRFGKVISADIIRDHK 277
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
TG S YGF+E++ ++C AA ++ I VDF
Sbjct: 278 TGDSLCYGFVEFEARESCEAAYFKMDNVLIDDRRIHVDF 316
>gi|183229788|ref|XP_001913374.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|169803196|gb|EDS89871.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 372
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ +P RT+ + RL K + E+ L++ F+EYG++ + +++D + G +K Y F+EY+
Sbjct: 17 ATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKD-LKGINKGYAFVEYNHRSE 75
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
A R N + I+V+ E GR +KP+RLGG
Sbjct: 76 AERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGG 113
>gi|367027924|ref|XP_003663246.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
gi|347010515|gb|AEO58001.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
Length = 313
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD---FVTGHSK 132
Y PH D +TL + RL+ N+ E DLE+ F +G + +R++RD G+ K
Sbjct: 87 NYNPHADPNIRGDAFKTLIVARLDYNADEKDLEREFGRFGPIERIRIIRDTHAHEKGNKK 146
Query: 133 R-----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ YGF+ ++ EK AA+ + + I VD E GR + GWKPR
Sbjct: 147 QKPHRGYGFVVFEREKDMRAALEGCDGIRIKDRRIKVDVERGRTVKGWKPR 197
>gi|367049672|ref|XP_003655215.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
gi|347002479|gb|AEO68879.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
Length = 391
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD---FVTGHSKR 133
Y PH D +TL + RL+ N+ E DLE+ F +G + +R++RD G+ K+
Sbjct: 88 YNPHEDPNIRGDAFKTLIVARLDYNADEKDLEREFGRFGPIERIRIIRDTHAHEKGNKKQ 147
Query: 134 -----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
YGF+ ++ EK AA+ + + I VD E GR + GWKPR
Sbjct: 148 KPHRGYGFVVFEREKDMRAALDGCDGIRIKDRRIKVDVERGRTVKGWKPR 197
>gi|45187810|ref|NP_984033.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|44982571|gb|AAS51857.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|374107246|gb|AEY96154.1| FADL063Wp [Ashbya gossypii FDAG1]
Length = 320
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY---DCEK 143
TDP RT+F+GRL+ + E +L++ F ++G++ VR+VRD +T + Y F+ + +C K
Sbjct: 103 TDPFRTIFVGRLHYDVDELELQKHFIKFGEIERVRIVRDKITNKPRGYAFVLFRDPECSK 162
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
I +G IVD E GR + ++P
Sbjct: 163 KAYREIGVHRGLMIRGRSAIVDIERGRTVKFFRP 196
>gi|380492518|emb|CCF34547.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 535
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + +ADLE F +GK++S V+RD TG S +Y F+EY
Sbjct: 242 PFAEVAPPENVLFVCKLNPVTTDADLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYAD 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLG--GGWGG 186
+ +C AA + I VDF ++ W K R+ GGWGG
Sbjct: 302 KASCEAAYSKMQDVLIDDRRIHVDFSQSVSKLSQVWRDDTNQKRRKHASRGGWGG 356
>gi|414590409|tpg|DAA40980.1| TPA: hypothetical protein ZEAMMB73_597299 [Zea mays]
Length = 658
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P + LFI + + E DLE+ F ++G+V S RVVRD TG S+ +GFL D ++ AA
Sbjct: 575 PGKNLFIAGFSYATTERDLEKKFCKFGRVTSARVVRDKRTGDSRGFGFLSLDKDEDADAA 634
Query: 149 IRALNRQNFQGSEIIVD 165
IRA + + G I+V+
Sbjct: 635 IRACDETEWNGRIILVE 651
>gi|414590408|tpg|DAA40979.1| TPA: hypothetical protein ZEAMMB73_597299 [Zea mays]
Length = 657
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P + LFI + + E DLE+ F ++G+V S RVVRD TG S+ +GFL D ++ AA
Sbjct: 574 PGKNLFIAGFSYATTERDLEKKFCKFGRVTSARVVRDKRTGDSRGFGFLSLDKDEDADAA 633
Query: 149 IRALNRQNFQGSEIIVD 165
IRA + + G I+V+
Sbjct: 634 IRACDETEWNGRIILVE 650
>gi|67482015|ref|XP_656357.1| U1 small nuclear ribonucleoprotein subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473555|gb|EAL50974.1| U1 small nuclear ribonucleoprotein subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 509
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ +P RT+ + RL K + E+ L++ F+EYG++ + +++D + G +K Y F+EY+
Sbjct: 100 ATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKD-LKGINKGYAFVEYNHRSE 158
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG 182
A R N + I+V+ E GR +KP+RLGG
Sbjct: 159 AERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGG 196
>gi|432871355|ref|XP_004071924.1| PREDICTED: uncharacterized protein LOC101174750 [Oryzias latipes]
Length = 469
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V + TG + Y F
Sbjct: 89 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNKGTGKPRGYAF 148
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW PR
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWLPR 190
>gi|403218287|emb|CCK72778.1| hypothetical protein KNAG_0L01580 [Kazachstania naganishii CBS
8797]
Length = 305
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ + TDP +T+F+GRL ++ E DL++ F +YG V VRVVRD + S+ YGF+ +
Sbjct: 93 PNIAGTDPYKTIFVGRLPYDTTELDLQEIFGKYGAVDKVRVVRD-KSNKSRGYGFVLFAD 151
Query: 142 EKACLAAIRALNRQN---FQGSEIIVDFECGRV 171
+A +R +G IVDFE GR
Sbjct: 152 PQASKRTMRETGVHRGIPIKGRTCIVDFERGRT 184
>gi|150003979|ref|YP_001298723.1| RNA-binding protein [Bacteroides vulgatus ATCC 8482]
gi|294778015|ref|ZP_06743449.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319639784|ref|ZP_07994514.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|345518929|ref|ZP_08798362.1| hypothetical protein BSFG_00023 [Bacteroides sp. 4_3_47FAA]
gi|423312876|ref|ZP_17290812.1| hypothetical protein HMPREF1058_01424 [Bacteroides vulgatus
CL09T03C04]
gi|149932403|gb|ABR39101.1| putative RNA-binding protein [Bacteroides vulgatus ATCC 8482]
gi|254833567|gb|EET13876.1| hypothetical protein BSFG_00023 [Bacteroides sp. 4_3_47FAA]
gi|294448073|gb|EFG16639.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317388601|gb|EFV69450.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|392686907|gb|EIY80206.1| hypothetical protein HMPREF1058_01424 [Bacteroides vulgatus
CL09T03C04]
Length = 123
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+FI LN N EA+L + FAEYG+V+SV+++ D TG SK YGF+E ++A AI A
Sbjct: 2 NIFIAGLNYNMSEAELGELFAEYGEVVSVKIIMDRETGRSKGYGFVEMADDEAGDKAIAA 61
Query: 152 LNRQNFQGSEIIV 164
LN + G + V
Sbjct: 62 LNEVDMDGKTLSV 74
>gi|26351239|dbj|BAC39256.1| unnamed protein product [Mus musculus]
Length = 642
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|449498377|ref|XP_002191180.2| PREDICTED: cleavage stimulation factor subunit 2 [Taeniopygia
guttata]
Length = 575
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|12840773|dbj|BAB24949.1| unnamed protein product [Mus musculus]
gi|148693009|gb|EDL24956.1| RIKEN cDNA 1700128F08 [Mus musculus]
Length = 152
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
W P YDP++AGSIDGTD PHDRA+ RA+ + Y P+ T D TLF+ +L+ ++
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLACYVPNKGVTGDLLHTLFVAQLDLQTK 63
Query: 104 E 104
E
Sbjct: 64 E 64
>gi|363751975|ref|XP_003646204.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889839|gb|AET39387.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 331
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
+ + TDP RT+F+GRL E +L++ F ++G + VR+VRD +T K Y F+ +
Sbjct: 99 NINDTDPFRTIFVGRLPYEVDELELQKQFIKFGDIERVRIVRDKLTNEPKGYAFVLFKDT 158
Query: 143 KACLAAIRALNRQN---FQGSEIIVDFECGRVLPGWKP 177
+ A R + +G +IVD E GR + +KP
Sbjct: 159 EGSRKAYREIGVHRGLLIKGRPVIVDIERGRTVKFFKP 196
>gi|398404163|ref|XP_003853548.1| hypothetical protein MYCGRDRAFT_70762 [Zymoseptoria tritici IPO323]
gi|339473430|gb|EGP88524.1| hypothetical protein MYCGRDRAFT_70762 [Zymoseptoria tritici IPO323]
Length = 449
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P + LF+ +LN +R+ DLE F+ +GK++S V+RD TG S +Y F+E+
Sbjct: 246 PFADVTPPEQILFVCKLNPVTRDEDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIEFAN 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR----FGG 197
++ C R F+ +++D V +L W N NS R FGG
Sbjct: 306 KEDC-------ERAYFKMQGVLIDDHRIHVDFSQSVSKLSADWRNNTNSKTARSRGGFGG 358
>gi|323348131|gb|EGA82385.1| Snp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 300
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
PH TDP RT+FIGRL + E +L++ F ++G++ +R+V+D +T SK Y F+ +
Sbjct: 98 PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157
Query: 142 EKACLAAIRALNRQNFQGSEI-----IVDFECGRVLPGWKP 177
+ A + + +G +I IVD E GR + + P
Sbjct: 158 PISSKMAFKEIGVH--RGIQIKDRVCIVDIERGRTVKYFXP 196
>gi|218188225|gb|EEC70652.1| hypothetical protein OsI_01937 [Oryza sativa Indica Group]
Length = 382
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P R LF+ + + E DLE+ F++YG+V S RVVRD +G S+ +GFL + ++ AA
Sbjct: 299 PGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDADAA 358
Query: 149 IRALNRQNFQGSEIIVD 165
IRA + + G I+V+
Sbjct: 359 IRACDETEWNGRIILVE 375
>gi|332212188|ref|XP_003255200.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Nomascus leucogenys]
Length = 622
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|632500|gb|AAB50269.1| polyadenylation factor 64 kDa subunit [Xenopus laevis]
Length = 497
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G L + +++L FAE+G V S +V+ D TG SK + F+E C AAI AL
Sbjct: 5 IYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAISAL 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+ + G I+V+ KPR G G+GGNR
Sbjct: 65 HGMSVDGRSIVVNL--------AKPREEGRGFGGNR 92
>gi|255544660|ref|XP_002513391.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
gi|223547299|gb|EEF48794.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
Length = 587
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL F+ +G VIS ++RDF TG S Y F+E++
Sbjct: 245 PDAEMKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFET 304
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+++C A ++ I VDF + RR GG G R
Sbjct: 305 KESCEQAYFKMDNALIDDRRIHVDFSQSVAKQWAEYRRRGGQMGKER 351
>gi|432111364|gb|ELK34639.1| Cleavage stimulation factor subunit 2 tau variant [Myotis davidii]
Length = 641
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 71 AILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGH 130
+ +A+RS S+ P+ LFIG ++ ++ E L +AF++YG+V+ R++ D TG
Sbjct: 28 SFFQAIRSM------SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGR 81
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
S+ +GF+ Y + +AI+AL+ Q+ G I V++
Sbjct: 82 SRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNY 117
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|310796009|gb|EFQ31470.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 501
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + +ADLE F +GK++S V+RD TG S +Y F+EY
Sbjct: 242 PFAEVAPPENVLFVCKLNPVTTDADLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYAD 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLG--GGWGG 186
+ +C AA + I VDF ++ W K R+ GGWGG
Sbjct: 302 KASCEAAYAKMQDVLIDDRRIHVDFSQSVSKLSQVWRDDTNQKRRKHASRGGWGG 356
>gi|11762098|gb|AAG40327.1|AF322194_1 variant polyadenylation protein CSTF-64 [Mus musculus]
Length = 630
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|410353769|gb|JAA43488.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|354476121|ref|XP_003500273.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Cricetulus griseus]
Length = 614
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 597
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|354476123|ref|XP_003500274.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Cricetulus griseus]
Length = 623
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|332254744|ref|XP_003276492.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Nomascus leucogenys]
Length = 597
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|410988989|ref|XP_004000752.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
2 [Felis catus]
Length = 577
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|348570430|ref|XP_003471000.1| PREDICTED: cleavage stimulation factor subunit 2-like [Cavia
porcellus]
Length = 577
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|344241215|gb|EGV97318.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Cricetulus
griseus]
Length = 645
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|21619877|gb|AAH33135.1| Similar to cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kD, partial [Homo sapiens]
Length = 559
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 15 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 74
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 75 NLNGREFSGRALRVD 89
>gi|4557493|ref|NP_001316.1| cleavage stimulation factor subunit 2 [Homo sapiens]
gi|332861154|ref|XP_003317595.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
troglodytes]
gi|397478196|ref|XP_003810439.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Pan
paniscus]
gi|426396653|ref|XP_004064546.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Gorilla
gorilla gorilla]
gi|461847|sp|P33240.1|CSTF2_HUMAN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|181139|gb|AAA35724.1| cleavage stimulation factor [Homo sapiens]
gi|17389334|gb|AAH17712.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|32879899|gb|AAP88780.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Homo
sapiens]
gi|61359609|gb|AAX41742.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|61359616|gb|AAX41743.1| cleavage stimulation factor 3' pre-RNA subunit 2 [synthetic
construct]
gi|119623223|gb|EAX02818.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, isoform
CRA_a [Homo sapiens]
gi|123981258|gb|ABM82458.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|123996091|gb|ABM85647.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
[synthetic construct]
gi|261860120|dbj|BAI46582.1| Cleavage stimulation factor 64 kDa subunit [synthetic construct]
gi|410256936|gb|JAA16435.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
gi|410289934|gb|JAA23567.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Pan
troglodytes]
Length = 577
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|410974961|ref|XP_003993907.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Felis
catus]
Length = 613
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|355562595|gb|EHH19189.1| hypothetical protein EGK_19854 [Macaca mulatta]
Length = 610
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 6 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 65
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 66 NLNGREFSGRALRVD 80
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|402910773|ref|XP_003918026.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Papio
anubis]
gi|402910775|ref|XP_003918027.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Papio
anubis]
Length = 577
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|157821159|ref|NP_001101056.1| cleavage stimulation factor subunit 2 tau variant [Rattus
norvegicus]
gi|149062701|gb|EDM13124.1| rCG47773 [Rattus norvegicus]
Length = 629
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 14 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 73
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 74 NLNGREFSGRALRVD 88
>gi|351709510|gb|EHB12429.1| Cleavage stimulation factor 64 kDa subunit [Heterocephalus glaber]
Length = 597
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|74007936|ref|XP_549135.2| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Canis
lupus familiaris]
Length = 597
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 577
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|358339950|dbj|GAA47912.1| U1 small nuclear ribonucleoprotein 70kDa [Clonorchis sinensis]
Length = 166
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 122 VVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
+V++ +TG + Y F+E++ E+ AA++ LN + G I+ D E GR P W+PRRLG
Sbjct: 1 MVKNRLTGKPRGYAFVEFEHEREMHAAVKGLNGKKIDGMRILTDIERGRTRPDWRPRRLG 60
Query: 182 GGWGGNR 188
G G NR
Sbjct: 61 KGLGKNR 67
>gi|444707906|gb|ELW49054.1| Cleavage stimulation factor subunit 2 tau variant [Tupaia
chinensis]
Length = 654
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|197100099|ref|NP_001125111.1| cleavage stimulation factor subunit 2 [Pongo abelii]
gi|71153230|sp|Q5RDA3.1|CSTF2_PONAB RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|55726993|emb|CAH90254.1| hypothetical protein [Pongo abelii]
Length = 577
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|397469483|ref|XP_003806381.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
paniscus]
Length = 615
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|297686917|ref|XP_002820977.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pongo
abelii]
Length = 625
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|332254742|ref|XP_003276491.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Nomascus leucogenys]
Length = 577
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|291408103|ref|XP_002720432.1| PREDICTED: cleavage stimulation factor subunit 2 [Oryctolagus
cuniculus]
Length = 576
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|197246895|gb|AAI69065.1| Cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Rattus
norvegicus]
Length = 629
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|194042423|ref|XP_001926989.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Sus scrofa]
Length = 615
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|388452994|ref|NP_001253727.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|355758732|gb|EHH61510.1| hypothetical protein EGM_21244 [Macaca fascicularis]
gi|383416951|gb|AFH31689.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|384946038|gb|AFI36624.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
gi|387541538|gb|AFJ71396.1| cleavage stimulation factor subunit 2 tau variant [Macaca mulatta]
Length = 620
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|402880821|ref|XP_003903988.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Papio
anubis]
Length = 620
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|194332803|ref|NP_001123707.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
(Silurana) tropicalis]
gi|189442601|gb|AAI67314.1| LOC100170457 protein [Xenopus (Silurana) tropicalis]
Length = 498
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|20380061|gb|AAH28239.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|325463311|gb|ADZ15426.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [synthetic construct]
Length = 616
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|410043860|ref|XP_001163035.2| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Pan troglodytes]
gi|410335357|gb|JAA36625.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335359|gb|JAA36626.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335361|gb|JAA36627.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
gi|410335363|gb|JAA36628.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Pan troglodytes]
Length = 615
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|126342916|ref|XP_001364467.1| PREDICTED: cleavage stimulation factor subunit 2-like [Monodelphis
domestica]
Length = 551
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|58737192|dbj|BAD89467.1| putative nuclear protein [Oryza sativa Japonica Group]
Length = 674
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P R LF+ + + E DLE+ F++YG+V S RVVRD +G S+ +GFL + ++ AA
Sbjct: 591 PGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDADAA 650
Query: 149 IRALNRQNFQGSEIIVD 165
IRA + + G I+V+
Sbjct: 651 IRACDETEWNGRIILVE 667
>gi|147898871|ref|NP_001080179.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Xenopus
laevis]
gi|27735464|gb|AAH41291.1| Cstf-64 protein [Xenopus laevis]
Length = 518
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|74007924|ref|XP_861405.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 5 [Canis
lupus familiaris]
Length = 577
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|355681345|gb|AER96778.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa [Mustela
putorius furo]
Length = 582
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|320586925|gb|EFW99588.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 428
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVT---GHSK 132
YKP DP +TL + RL+ + E DLE+ FA YG + +R+++D G+ K
Sbjct: 87 NYKPADDPNIRGDPFKTLIVARLSYEATEQDLEREFARYGPIERIRIIKDTHADEKGNKK 146
Query: 133 R-----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
R Y F+ ++ EK AA A + + I VD E GR + GWKP+
Sbjct: 147 RKPHRGYAFVVFEREKDMRAAHDACDGIRIKDRRIKVDVERGRTVKGWKPQ 197
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|14149675|ref|NP_056050.1| cleavage stimulation factor subunit 2 tau variant [Homo sapiens]
gi|71153234|sp|Q9H0L4.1|CSTFT_HUMAN RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant; AltName:
Full=TauCstF-64
gi|12053011|emb|CAB66681.1| hypothetical protein [Homo sapiens]
gi|24416591|gb|AAN05429.1| tCstF-64 [Homo sapiens]
gi|119574527|gb|EAW54142.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant [Homo sapiens]
gi|189067256|dbj|BAG36966.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|281348298|gb|EFB23882.1| hypothetical protein PANDA_020101 [Ailuropoda melanoleuca]
Length = 612
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|194373969|dbj|BAG62297.1| unnamed protein product [Homo sapiens]
Length = 553
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|297719959|ref|NP_001172341.1| Os01g0367300 [Oryza sativa Japonica Group]
gi|57900228|dbj|BAD88333.1| peptidylprolyl cis-trans isomerase-like protein [Oryza sativa
Japonica Group]
gi|255673231|dbj|BAH91071.1| Os01g0367300 [Oryza sativa Japonica Group]
Length = 698
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P R LF+ + + E DLE+ F++YG+V S RVVRD +G S+ +GFL + ++ AA
Sbjct: 615 PGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDADAA 674
Query: 149 IRALNRQNFQGSEIIVD 165
IRA + + G I+V+
Sbjct: 675 IRACDETEWNGRIILVE 691
>gi|358388209|gb|EHK25803.1| hypothetical protein TRIVIDRAFT_189523 [Trichoderma virens Gv29-8]
Length = 453
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTQDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPR-------RLGGGWGG 186
+ +C A + I VDF ++ W+ R GGWGG
Sbjct: 302 KASCEVAYTKMQDVLIDDRRIHVDFSQSVSKLSDVWRQDTNNKRRARARGGWGG 355
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|301788318|ref|XP_002929575.1| PREDICTED: cleavage stimulation factor subunit 2-like [Ailuropoda
melanoleuca]
Length = 582
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 28 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 87
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 88 NLNGREFSGRALRVD 102
>gi|440299520|gb|ELP92072.1| hypothetical protein EIN_379390 [Entamoeba invadens IP1]
Length = 348
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN+ +R++DLE F ++GKV+S V+ D TG+S Y F+E++
Sbjct: 219 PFAEIKPPENVLFVCKLNQCTRDSDLEAIFDKFGKVVSAEVICDKKTGNSLGYAFIEFEA 278
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++AC A + ++ I VDF
Sbjct: 279 KEACEEAYKKMDNVIIDDRRIHVDF 303
>gi|426364779|ref|XP_004049473.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
gi|426364781|ref|XP_004049474.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Gorilla gorilla gorilla]
Length = 617
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|431839028|gb|ELK00957.1| Cleavage stimulation factor 64 kDa subunit, tau variant [Pteropus
alecto]
Length = 601
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|417403608|gb|JAA48603.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 647
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|194205912|ref|XP_001917732.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Equus caballus]
Length = 619
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 27 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 86
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 87 NLNGREFSGRALRVD 101
>gi|212692825|ref|ZP_03300953.1| hypothetical protein BACDOR_02324 [Bacteroides dorei DSM 17855]
gi|237709514|ref|ZP_04539995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754720|ref|ZP_06089772.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|345514558|ref|ZP_08794069.1| hypothetical protein BSEG_02848 [Bacteroides dorei 5_1_36/D4]
gi|423230213|ref|ZP_17216617.1| hypothetical protein HMPREF1063_02437 [Bacteroides dorei
CL02T00C15]
gi|423241058|ref|ZP_17222172.1| hypothetical protein HMPREF1065_02795 [Bacteroides dorei
CL03T12C01]
gi|423243926|ref|ZP_17225001.1| hypothetical protein HMPREF1064_01207 [Bacteroides dorei
CL02T12C06]
gi|212664614|gb|EEB25186.1| hypothetical protein BACDOR_02324 [Bacteroides dorei DSM 17855]
gi|229436630|gb|EEO46707.1| hypothetical protein BSEG_02848 [Bacteroides dorei 5_1_36/D4]
gi|229456570|gb|EEO62291.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|263234834|gb|EEZ20402.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392631722|gb|EIY25691.1| hypothetical protein HMPREF1063_02437 [Bacteroides dorei
CL02T00C15]
gi|392643120|gb|EIY36878.1| hypothetical protein HMPREF1065_02795 [Bacteroides dorei
CL03T12C01]
gi|392643444|gb|EIY37194.1| hypothetical protein HMPREF1064_01207 [Bacteroides dorei
CL02T12C06]
Length = 122
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FI LN N EA+L + FAEYG+V+SV+++ D TG SK YGF+E ++A AI AL
Sbjct: 3 IFIAGLNYNMSEAELGELFAEYGEVVSVKIIMDRETGRSKGYGFVEMADDEAGDKAIAAL 62
Query: 153 NRQNFQG 159
N + G
Sbjct: 63 NEVDMDG 69
>gi|51258747|gb|AAH80037.1| Cstf-64-prov protein [Xenopus laevis]
Length = 498
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|291404363|ref|XP_002718535.1| PREDICTED: cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Oryctolagus cuniculus]
Length = 601
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|431895723|gb|ELK05144.1| Cleavage stimulation factor 64 kDa subunit [Pteropus alecto]
Length = 577
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|395820735|ref|XP_003783716.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Otolemur garnettii]
Length = 601
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|18875338|ref|NP_573459.1| cleavage stimulation factor subunit 2 [Mus musculus]
gi|71153229|sp|Q8BIQ5.2|CSTF2_MOUSE RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|11139720|gb|AAG31814.1|AF317552_1 polyadenylation protein CSTF64 [Mus musculus]
gi|26353226|dbj|BAC40243.1| unnamed protein product [Mus musculus]
Length = 580
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|62896707|dbj|BAD96294.1| cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau
variant variant [Homo sapiens]
Length = 616
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|192764312|gb|ACF05700.1| betaCstF-64 variant 3 [Mus musculus]
Length = 630
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|348538876|ref|XP_003456916.1| PREDICTED: hypothetical protein LOC100701048 [Oreochromis
niloticus]
Length = 470
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 70 RAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
+A++ + PH D +TLF+ R+N ++ E+ L + F YG + + +V +
Sbjct: 79 QAVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYNK 138
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
TG + Y F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 139 KTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|403260042|ref|XP_003922497.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Saimiri boliviensis boliviensis]
Length = 621
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|192764316|gb|ACF05702.1| betaCstF-64 variant 1 [Mus musculus]
Length = 604
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|26328597|dbj|BAC28037.1| unnamed protein product [Mus musculus]
Length = 580
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|154494359|ref|ZP_02033679.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|423346931|ref|ZP_17324618.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|423725455|ref|ZP_17699592.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
gi|154085803|gb|EDN84848.1| hypothetical protein PARMER_03714 [Parabacteroides merdae ATCC
43184]
gi|409218592|gb|EKN11560.1| hypothetical protein HMPREF1060_02290 [Parabacteroides merdae
CL03T12C32]
gi|409234579|gb|EKN27407.1| hypothetical protein HMPREF1078_03481 [Parabacteroides merdae
CL09T00C40]
Length = 80
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+++G LN RE DL+Q EYG V SV++++D TG SK +GF+E ++A AI
Sbjct: 2 NIYVGNLNYRVREDDLKQVMEEYGTVESVKIIKDRETGKSKGFGFVEMPDDEAAKKAIAE 61
Query: 152 LNRQNFQGSEIIV 164
LN ++G +I++
Sbjct: 62 LNEAEYEGRQIVI 74
>gi|348576422|ref|XP_003473986.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Cavia porcellus]
Length = 630
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|196115100|ref|NP_001124486.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Rattus
norvegicus]
gi|195539770|gb|AAI68251.1| Cstf2 protein [Rattus norvegicus]
Length = 575
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|192764314|gb|ACF05701.1| alphaCstF-64 variant 4 [Mus musculus]
Length = 554
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|340514765|gb|EGR45024.1| predicted protein [Trichoderma reesei QM6a]
Length = 471
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTQDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPR-------RLGGGWGG 186
+ +C A + I VDF ++ W+ R GGWGG
Sbjct: 302 KASCELAYSKMQDVLIDDRRIHVDFSQSVSKLSDVWRQDTNNKRRARARGGWGG 355
>gi|449704634|gb|EMD44841.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 471
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ +P RT+ + RL K + E+ L++ F+EYG++ + +++D + G +K Y F+EY+
Sbjct: 17 ATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIVIIKD-LKGINKGYAFVEYNHRSE 75
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR 194
A R N + I+V+ E GR +KP+RLGG R+ + R
Sbjct: 76 AERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTIERRRSEDKRR 125
>gi|22478042|gb|AAH36719.1| Cstf2 protein [Mus musculus]
Length = 510
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+QAF E+G V S +V+ D TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIEGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q+ G I+V+
Sbjct: 65 NGQSLSGRAIVVN 77
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
+++++ +TLFI R+N ++ E+ L + F YG + + + D TG K Y F+EY E+
Sbjct: 95 SATSNAFKTLFIARVNYDTTESKLRREFESYGPIKMISIAHDINTGKPKGYAFIEYAHER 154
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+A + + + ++VD E R + GW PR
Sbjct: 155 DMHSAYKYADGKKIDSRRVLVDVERARTVKGWTPR 189
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 63 TDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
T T P D +I + +T +P LF+ L+K + L+QAF+++G+V+ RV
Sbjct: 24 TTTTPSDLSIFSSQANTAPSAREQAEPNTNLFVSGLSKRTTTEGLKQAFSKFGEVVQARV 83
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR-VLPGWKPRRLG 181
V D V+G+SK +GF+ Y + I ++ + G I ++ R LPG G
Sbjct: 84 VTDRVSGYSKGFGFVRYGSLEDAEKGIEGMDGKFLDGWVIFAEYARPRPPLPG---NNTG 140
Query: 182 GGWGGNRNS 190
+G N S
Sbjct: 141 SAYGNNTGS 149
>gi|410927616|ref|XP_003977237.1| PREDICTED: cleavage stimulation factor subunit 2-like [Takifugu
rubripes]
Length = 497
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 89 NLNGREFSGRALRVD 103
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos taurus]
Length = 331
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|389636494|ref|XP_003715897.1| peptidyl-prolyl cis-trans isomerase-like 4 [Magnaporthe oryzae
70-15]
gi|351641716|gb|EHA49578.1| peptidyl-prolyl cis-trans isomerase-like 4 [Magnaporthe oryzae
70-15]
gi|440471210|gb|ELQ40241.1| peptidyl-prolyl cis-trans isomerase cyp6 [Magnaporthe oryzae Y34]
gi|440490712|gb|ELQ70239.1| peptidyl-prolyl cis-trans isomerase cyp6 [Magnaporthe oryzae P131]
Length = 505
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ADLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 248 PFAEVKPPENVLFVCKLNPVTQDADLELIFSRFGKILSCEVIRDSKTGDSLQYAFIEFED 307
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLG----GGWGG 186
+ AC A + I VDF ++ W K R+ GGWGG
Sbjct: 308 KAACETAYFKMQGVLIDDRRIHVDFSQSVSKLSNAWRTDANDKRRKQAAKGRGGWGG 364
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFIG L+ + E D+ AF+E+G+V VR+ +D +G K +G++E+ +++ AA
Sbjct: 310 PSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 369
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
I A+ Q G + +DF R
Sbjct: 370 IDAMTGQELAGRPLRLDFSTPR 391
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 26 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 85
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 86 NLNGREFSGRALRVD 100
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|393903982|gb|EFO15894.2| cleavage stimulation factor [Loa loa]
Length = 337
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 75 ALRSTYKPHTSSTD-PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
A+ ST K S+TD R++F+G ++ E L+Q FA+ G V+ +R+V D TG K
Sbjct: 9 AVTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKG 68
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
YGF EY+ + +AIR LN G + VD G
Sbjct: 69 YGFCEYNDAQTAESAIRNLNGFELNGRPLRVDSAAG 104
>gi|312094880|ref|XP_003148175.1| cleavage stimulation factor [Loa loa]
Length = 334
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 75 ALRSTYKPHTSSTD-PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
A+ ST K S+TD R++F+G ++ E L+Q FA+ G V+ +R+V D TG K
Sbjct: 9 AVTSTTKTAPSATDRSARSVFVGNISYEVGEEQLKQVFAQVGPVVHLRLVHDRDTGKPKG 68
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
YGF EY+ + +AIR LN G + VD G
Sbjct: 69 YGFCEYNDAQTAESAIRNLNGFELNGRPLRVDSAAG 104
>gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLFIG LN + E DLE F +YG ++ V +++D T S+ + F+ ++ A A R
Sbjct: 8 TLFIGGLNVGTNEKDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARD 67
Query: 152 LNRQNFQGSEIIVD------FECGRVLPGWKPRRLG 181
+N + G I V+ FE GR P PR G
Sbjct: 68 MNGKALDGKSIKVEQANKPSFESGRRGPPPAPRSRG 103
>gi|326673799|ref|XP_003199996.1| PREDICTED: cleavage stimulation factor subunit 2-like [Danio rerio]
Length = 488
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 83
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 84 NLNGREFSGRALRVD 98
>gi|351715564|gb|EHB18483.1| Cleavage stimulation factor 64 kDa subunit, tau variant
[Heterocephalus glaber]
Length = 642
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|358337313|dbj|GAA55690.1| ubiquitin-associated protein 2-like [Clonorchis sinensis]
Length = 1235
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 45 WYPYCIT---YDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTS 85
WYPY YDP+ GSIDGTDT+PHDRA++R L +TYKP S
Sbjct: 973 WYPYARFHGFYDPVMVGSIDGTDTVPHDRAVMRCLSATYKPKFS 1016
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S+ P+ LFIG ++ ++ E L +AF++YG+V+ R++ D TG S+ +GF+ Y +
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
+AI+AL+ Q+ G I V++
Sbjct: 97 SSAIQALDGQDLHGRPIRVNY 117
>gi|344230215|gb|EGV62100.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 321
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+F+ RL+ + E D+ + F+ +G + SVR++R TG S+ YGF+ ++ + +
Sbjct: 116 DPYRTVFVSRLDYSLGEIDVSKHFSRFGPIESVRIIRSSSTGKSRGYGFIVFEKDTDAKS 175
Query: 148 AIRALNRQNFQ---GSE-IIVDFECGRVLPGW 175
IR L + GS I+VD E GR++ W
Sbjct: 176 CIRELAPTGLKIGPGSRTILVDMERGRLVRNW 207
>gi|218262316|ref|ZP_03476830.1| hypothetical protein PRABACTJOHN_02504 [Parabacteroides johnsonii
DSM 18315]
gi|423343074|ref|ZP_17320788.1| hypothetical protein HMPREF1077_02218 [Parabacteroides johnsonii
CL02T12C29]
gi|218223467|gb|EEC96117.1| hypothetical protein PRABACTJOHN_02504 [Parabacteroides johnsonii
DSM 18315]
gi|409216750|gb|EKN09733.1| hypothetical protein HMPREF1077_02218 [Parabacteroides johnsonii
CL02T12C29]
Length = 80
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+++G LN RE DL+Q EYG V SV++++D TG SK +GF+E ++A AI
Sbjct: 2 NIYVGNLNYRVREDDLKQVMEEYGTVESVKIIKDRETGKSKGFGFVEMPDDEAAKKAIAE 61
Query: 152 LNRQNFQGSEIIV 164
LN ++G +++V
Sbjct: 62 LNEAEYEGRQMVV 74
>gi|430812114|emb|CCJ30450.1| unnamed protein product [Pneumocystis jirovecii]
Length = 422
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +R+ DLE F+ +GK+IS ++RD TG S +Y F+E++
Sbjct: 238 PFAEVKPPDHVLFVCKLNSATRDEDLELIFSRFGKIISCEIIRDRRTGDSLQYAFIEFEK 297
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLGGGWGGNRNSGQLRFGG 197
++ C A + I VDF ++ W R+ W +N+ Q F G
Sbjct: 298 KEDCEQAYFKMQDVLIDDKRIKVDFSQSVSKLSDSW---RMETNW-KRKNAVQKSFAG 351
>gi|76253771|ref|NP_956408.2| cleavage stimulation factor subunit 2 [Danio rerio]
gi|41107668|gb|AAH65442.1| Cleavage stimulation factor, 3' pre-RNA, subunit 2 [Danio rerio]
Length = 488
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 24 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 83
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 84 NLNGREFSGRALRVD 98
>gi|452844589|gb|EME46523.1| hypothetical protein DOTSEDRAFT_169172 [Dothistroma septosporum
NZE10]
Length = 465
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P + LF+ +LN +R+ DLE F+ +GK++S V+RD TG S +Y F+E+
Sbjct: 246 PFADVTPPEQILFVCKLNPVTRDEDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIEFAN 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGG 186
++ C A + I VDF ++ W K R GG+GG
Sbjct: 306 KEDCERAYFKMQGVLIDDHRIHVDFSQSVSKLSTDWRNSTNSKTARSRGGFGG 358
>gi|367026289|ref|XP_003662429.1| hypothetical protein MYCTH_2303035 [Myceliophthora thermophila ATCC
42464]
gi|347009697|gb|AEO57184.1| hypothetical protein MYCTH_2303035 [Myceliophthora thermophila ATCC
42464]
Length = 507
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 244 PFAEVKPPENVLFVCKLNPITTDEDLELIFSRFGKILSCEVIRDAKTGDSLQYAFIEFED 303
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK 176
K+C A +++ I VDF R+ W+
Sbjct: 304 RKSCEEAYSKMDQVLIDDRRIHVDFSQSVSRLSQAWR 340
>gi|154301711|ref|XP_001551267.1| hypothetical protein BC1G_10007 [Botryotinia fuckeliana B05.10]
gi|347828519|emb|CCD44216.1| hypothetical protein [Botryotinia fuckeliana]
Length = 459
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+EY+
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEYED 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
EK+C A + I VDF
Sbjct: 299 EKSCEQAYFKMQGVLIDDHRIHVDF 323
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
H ++ T+ LFI L+ + E L AF +GK++ V+++ D ++ SK Y F+EY E
Sbjct: 298 HQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTE 357
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
+A AA++ +N + G I+VD + PRR +GGNR+
Sbjct: 358 EAASAALKEMNGKIINGWMIVVD------IAKPSPRR----YGGNRS 394
>gi|148906727|gb|ABR16511.1| unknown [Picea sitchensis]
Length = 635
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LFI + + E DLE+ F+ +G+V VR+VRD +TG S+ +GFL + ++ AA
Sbjct: 552 PGNNLFIAGFSFVTTERDLEKKFSRFGRVNDVRIVRDKLTGDSRGFGFLSLERDEDADAA 611
Query: 149 IRALNRQNFQGSEIIVD 165
IRAL++ + G ++V+
Sbjct: 612 IRALDQTQWNGRIVLVE 628
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
H ++ T+ LFI L+ + E L AF +GK++ V+++ D ++ SK Y F+EY E
Sbjct: 298 HQTTPVKTKKLFITGLSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTE 357
Query: 143 KACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
+A AA++ +N + G I+VD + PRR +GGNR+
Sbjct: 358 EAASAALKEMNGKIINGWMIVVD------IAKPSPRR----YGGNRS 394
>gi|51468002|ref|NP_001003875.1| U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
gi|49619089|gb|AAT68129.1| U1 small ribonucleoprotein 70kd [Danio rerio]
Length = 495
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 70 RAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
+ ++ + PH + D +TLF+ R+N ++ E+ L + F YG + + +V +
Sbjct: 79 QVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNK 138
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
TG + Y F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 139 KTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAISGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|346977630|gb|EGY21082.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium dahliae
VdLs.17]
Length = 509
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +G ++S V+RD TG S +Y F+EYD
Sbjct: 242 PFAEVAPPENILFVCKLNPVTTDGDLELIFGRFGTILSCEVIRDKKTGDSLQYAFIEYDD 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW-----KPRRLG---GGWGG 186
+ +C AA + I VDF ++ W K R+ GGWGG
Sbjct: 302 KSSCEAAYFKMQDVLIDDRRIHVDFSQSVSKLSDVWRNDTNKKRKKNASRGGWGG 356
>gi|444518829|gb|ELV12414.1| Cleavage stimulation factor subunit 2 [Tupaia chinensis]
Length = 409
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|389632567|ref|XP_003713936.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|351646269|gb|EHA54129.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|440473215|gb|ELQ42030.1| hypothetical protein OOU_Y34scaffold00240g37 [Magnaporthe oryzae
Y34]
gi|440480244|gb|ELQ60919.1| hypothetical protein OOW_P131scaffold01214g36 [Magnaporthe oryzae
P131]
Length = 405
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 66 IPHDRAILRALR---STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVIS 119
+ H++ I L+ + YKP D +TL + RL+ ++ E DLE+ F +G +
Sbjct: 71 LEHEKEIALKLKEGPAKYKPQDDPNIRGDAFKTLIVARLSYDANEQDLEREFGRFGTIER 130
Query: 120 VRVVRD---FVTGHSKR-----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRV 171
+R+++D G+ KR Y F+ ++ EK AA+ + + I VD E GR
Sbjct: 131 IRIIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALEGCDGIRIKDRRIKVDVERGRT 190
Query: 172 LPGWKPR 178
+ GWKPR
Sbjct: 191 VEGWKPR 197
>gi|156836695|ref|XP_001642396.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112914|gb|EDO14538.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVT-------GHSKRY 134
P+ TDP RT+F+GRL + E DL++ F ++G++ VR+VRD T G+S+ Y
Sbjct: 99 PNVKDTDPYRTIFVGRLPYDVNEMDLQKLFNKFGQIEKVRIVRDKKTITKTNPLGNSRGY 158
Query: 135 GFLEYDCEKACLAAIRALNRQ---NFQGSEIIVDFECGRVLPGWKP 177
F+ + + + A + + G IVD E GR + +KP
Sbjct: 159 AFIVFADQLSSKMACKEIGVHRGIEINGRNCIVDIERGRTVKYFKP 204
>gi|348515337|ref|XP_003445196.1| PREDICTED: cleavage stimulation factor subunit 2-like [Oreochromis
niloticus]
Length = 478
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 89 NLNGREFSGRALRVD 103
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFIG L+ + E D+ AF+E+G+V VR+ +D +G K +G++E+ +++ AA
Sbjct: 300 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 359
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
I A+ Q G + +DF R
Sbjct: 360 IDAMTGQELAGRPLRLDFSTPR 381
>gi|424513420|emb|CCO66042.1| unnamed protein product [Bathycoccus prasinos]
Length = 479
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P +LF+ +LN + + DLE F+ +GKV S V+RD TG S Y F+ ++
Sbjct: 248 PDVDAKPPDESLFVCKLNPVTTDEDLEIIFSRFGKVTSCDVIRDRRTGDSLCYAFINFET 307
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPG-WKPRRLGGGWGGNR----NSGQLRFG 196
++ C AA ++ I VDF + + G WK R G GG N+ + G
Sbjct: 308 KEMCEAAYFKMDNALIDDRRIHVDF--SQSMHGLWKNFRKFGKKGGTEDDMANAANAKRG 365
Query: 197 GRNKPW 202
G + W
Sbjct: 366 GGSSDW 371
>gi|449302928|gb|EMC98936.1| hypothetical protein BAUCODRAFT_65867 [Baudoinia compniacensis UAMH
10762]
Length = 460
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY-- 139
P T P + LF+ +LN +R+ DLE F+ +GK++S V+RD TG S +Y F+E+
Sbjct: 246 PFADVTPPEQILFVCKLNPVTRDEDLELIFSRFGKILSCEVIRDRKTGDSLQYAFIEFAK 305
Query: 140 --DCEKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGG 186
DCE+A L I VDF ++ W K R GG+GG
Sbjct: 306 KEDCERAYFKMQGVL----IDDHRIHVDFSQSVSKLSKEWRSTTNSKTARSRGGFGG 358
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
Length = 110
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R++DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDPEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|409079456|gb|EKM79817.1| hypothetical protein AGABI1DRAFT_113097 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 448
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +G ++S +V+RD TG S +Y F+E+D
Sbjct: 246 PFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDK 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW-------KPRRLGGGWGG 186
A + I VDF R+ W KP R+G G+GG
Sbjct: 306 RDDAEQAYFKMQNVLVDDRRIWVDFSQSVARMNNQWSNDIKRGKPSRVGEGFGG 359
>gi|432877328|ref|XP_004073146.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 1 [Oryzias latipes]
Length = 494
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 89 NLNGREFSGRALRVD 103
>gi|85000601|ref|XP_955019.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303165|emb|CAI75543.1| hypothetical protein, conserved [Theileria annulata]
Length = 164
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P LF+ +LN + E DL+ F+ +G V S +++D+VTG S +YGF+E++
Sbjct: 44 PDADITPPKNVLFVCKLNPVTEEKDLKIIFSRFGNVRSCDIIKDYVTGDSLQYGFIEFET 103
Query: 142 EKACLAAIRALNRQNFQGSEIIVD 165
E++C N F+ +++D
Sbjct: 104 EESC-------NEAYFKMQNVLID 120
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|357121886|ref|XP_003562648.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Brachypodium distachyon]
Length = 546
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 45 WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSRE 104
W P T DP Q + + + IL ++ P P LF+ +LN +++
Sbjct: 198 WVPLDETVDPEQLEEMIRSKEAHANAVILESVGDI--PDAEVKPPDNVLFVCKLNPVTQD 255
Query: 105 ADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIV 164
DL F+ +G V S ++RDF TG S Y F+E++ ++AC A ++ I V
Sbjct: 256 EDLYTIFSRFGTVTSAEIIRDFKTGDSLCYAFIEFEVKEACERAYFKMDNCLIDDRRIHV 315
Query: 165 DF 166
DF
Sbjct: 316 DF 317
>gi|150003039|ref|YP_001297783.1| RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212690527|ref|ZP_03298655.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|237708016|ref|ZP_04538497.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|265754197|ref|ZP_06089386.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294775663|ref|ZP_06741171.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319642186|ref|ZP_07996846.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|345515924|ref|ZP_08795421.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|345518203|ref|ZP_08797658.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|423229914|ref|ZP_17216319.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|423241567|ref|ZP_17222679.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|423247004|ref|ZP_17228055.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|423314856|ref|ZP_17292788.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
gi|149931463|gb|ABR38161.1| putative RNA-binding protein rbpA [Bacteroides vulgatus ATCC 8482]
gi|212666876|gb|EEB27448.1| hypothetical protein BACDOR_00009 [Bacteroides dorei DSM 17855]
gi|229436554|gb|EEO46631.1| hypothetical protein BSEG_02772 [Bacteroides dorei 5_1_36/D4]
gi|229458002|gb|EEO63723.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|254836470|gb|EET16779.1| hypothetical protein BSFG_02926 [Bacteroides sp. 4_3_47FAA]
gi|263234906|gb|EEZ20461.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|294450507|gb|EFG18999.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317386172|gb|EFV67091.1| RNA-binding protein [Bacteroides sp. 3_1_40A]
gi|392632705|gb|EIY26663.1| hypothetical protein HMPREF1063_02139 [Bacteroides dorei
CL02T00C15]
gi|392633765|gb|EIY27703.1| hypothetical protein HMPREF1064_04261 [Bacteroides dorei
CL02T12C06]
gi|392641153|gb|EIY34938.1| hypothetical protein HMPREF1065_03302 [Bacteroides dorei
CL03T12C01]
gi|392681038|gb|EIY74400.1| hypothetical protein HMPREF1058_03400 [Bacteroides vulgatus
CL09T03C04]
Length = 81
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+++G LN +E DLEQA A YG V SV+V++D TG SK + F+E + + A+
Sbjct: 2 NMYVGNLNYRVKEGDLEQAMAAYGVVTSVKVIKDRETGKSKGFAFVEMENDAEAAQAMNE 61
Query: 152 LNRQNFQGSEIIV 164
LN F G ++++
Sbjct: 62 LNGSEFMGRQLVI 74
>gi|149245162|ref|XP_001527115.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449509|gb|EDK43765.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 305
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP RT+FI RL+ + E D+ Q F +YG + S++++RD G S+ YGF+ ++ E
Sbjct: 3 DPYRTVFIARLDYSLTELDVTQHFQKYGIIESIKIIRD-REGKSRGYGFIVFENEADANT 61
Query: 148 AIRALNRQNFQ--GSEIIVDFECGRVLPGWKP 177
+ +R + +VD E R+L WKP
Sbjct: 62 CVNKTSRLGVKLGNRTALVDIERSRILRNWKP 93
>gi|452983234|gb|EME82992.1| hypothetical protein MYCFIDRAFT_64248 [Pseudocercospora fijiensis
CIRAD86]
Length = 454
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P + LF+ +LN +R+ DLE F+ +GK++S V+RD TG S +Y F+E+
Sbjct: 246 PFADVTPPEQILFVCKLNPVTRDDDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIEFAN 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGG 186
++ C A + I VDF ++ W K R GG+GG
Sbjct: 306 KEDCERAYFKMQGVLIDDHRIHVDFSQSVSKLSADWRNTTNSKTARSRGGFGG 358
>gi|432877330|ref|XP_004073147.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
isoform 2 [Oryzias latipes]
Length = 479
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 29 RSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 88
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 89 NLNGREFSGRALRVD 103
>gi|426192602|gb|EKV42538.1| hypothetical protein AGABI2DRAFT_195839 [Agaricus bisporus var.
bisporus H97]
Length = 448
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +G ++S +V+RD TG S +Y F+E+D
Sbjct: 246 PFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDK 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW-------KPRRLGGGWGG 186
A + I VDF R+ W KP R+G G+GG
Sbjct: 306 RDDAEQAYFKMQNVLVDDRRIWVDFSQSVARMNNQWSNDIKRGKPSRVGEGFGG 359
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 71 AILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGH 130
+ +A+RS S+ P+ LFIG ++ ++ E L +AF++YG+V+ R++ D TG
Sbjct: 28 SFFQAIRSM------SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGR 81
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
S+ +GF+ Y + +AI+AL+ Q+ G I V++ R
Sbjct: 82 SRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|116207864|ref|XP_001229741.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
gi|88183822|gb|EAQ91290.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
Length = 387
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD---FVTGHSK 132
Y PH D +TL + RL+ ++ E DLE+ F +G + +R++RD G+ K
Sbjct: 87 NYSPHDDPNIRGDAFKTLIVARLDYSADEKDLEREFGRFGPIERIRIIRDTHAHEKGNKK 146
Query: 133 R-----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ YGF+ ++ EK AA+ + + I VD E GR + GWKPR
Sbjct: 147 KKPHRGYGFVVFEREKDMRAALDGCDGIRIKDRRIKVDVERGRTVKGWKPR 197
>gi|224373359|ref|YP_002607731.1| RNA-binding protein [Nautilia profundicola AmH]
gi|223589280|gb|ACM93016.1| RNA-binding protein [Nautilia profundicola AmH]
Length = 84
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+T+++G +N + E DL FAEYG+VISV+++ D TG SK +GF+E E AI
Sbjct: 2 KTIYVGNINYQATEDDLRPVFAEYGEVISVKIINDRETGRSKGFGFVE--MESGADTAIE 59
Query: 151 ALNRQNFQGSEIIVD 165
L+ ++FQG + V+
Sbjct: 60 ELDGKDFQGRRLRVN 74
>gi|453086313|gb|EMF14355.1| cyclophilin-like protein [Mycosphaerella populorum SO2202]
Length = 442
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P + LF+ +LN +R+ DLE F+ +GK++S V+RD +G S +Y F+E+
Sbjct: 246 PFADVTPPEQILFVCKLNPVTRDEDLELIFSRFGKILSCEVIRDKKSGDSLQYAFIEFAN 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGG 186
++ C A + I VDF ++ W K R GG+GG
Sbjct: 306 KEDCERAYFKMQGVLIDDHRIHVDFSQSVSKIADDWRSNTNSKTARSRGGFGG 358
>gi|429849405|gb|ELA24798.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 529
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + +ADLE F +G+++S V+RD TG S +Y F+EY
Sbjct: 242 PFAEVAPPENVLFVCKLNPVTTDADLELIFGRFGEILSCEVIRDAKTGDSLQYAFIEYAD 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW--------KPRRLGGGWGG 186
+ +C AA + I VDF ++ W K GGWGG
Sbjct: 302 KASCEAAYFKMQDVLIDDRRIHVDFSQSVSKLSQVWRDDTNSKRKKNASRGGWGG 356
>gi|346223551|ref|ZP_08844693.1| RNP-1 like RNA-binding protein [Anaerophaga thermohalophila DSM
12881]
Length = 159
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+ +L+ + DL FAEYG+V+S +V+ D TG SKR+GF+E E++ AI+ L
Sbjct: 59 LFVAKLSAATTSDDLNDLFAEYGEVVSAKVIMDRDTGASKRFGFVEMKDEESAQKAIKDL 118
Query: 153 NRQNFQGSEIIV 164
N F S I+V
Sbjct: 119 NECLFDNSPIVV 130
>gi|70997103|ref|XP_753306.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|66850942|gb|EAL91268.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|159126968|gb|EDP52084.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
A1163]
Length = 395
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCE 142
DP +TLF+ RL+ + +E+DLE+ F +G + +R+V+D VT + Y F+ Y+ E
Sbjct: 99 DPFKTLFVARLSYDVKESDLEREFGRFGPIERIRIVKDTVTPKGSKKPHRGYAFIVYERE 158
Query: 143 KAC--LAAIR--------ALNRQN---FQGSEIIVDFECGRVLPGWKP 177
K +AA L+ +N + ++VD E GR + GWKP
Sbjct: 159 KDMKGIAATHNYSENSATPLDPKNGIRIKDRRVLVDVERGRTVKGWKP 206
>gi|46117274|ref|XP_384655.1| hypothetical protein FG04479.1 [Gibberella zeae PH-1]
Length = 605
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C AA + I VDF ++ W+ RR GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRTNAGRGGWGG 356
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R++DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|428671999|gb|EKX72914.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + E DL+ F+ +G V +++D+VTG S +Y F+E++
Sbjct: 44 PDADIAPPKNVLFVCKLNPVTEEGDLKIIFSRFGNVKKCDIIKDYVTGDSLQYAFIEFET 103
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
E++C A + I VDF C V WK + + G + G R +
Sbjct: 104 EESCNEAYFKMQNVLIDDRRIHVDF-CQSVSGFWKRYHANESFTRQKWRGHVSQGNRYRE 162
Query: 202 WVKPVQLMNERELGEWRKQG 221
+ ++R E R +G
Sbjct: 163 RSRDRHRTHDRYREEHRHRG 182
>gi|423280583|ref|ZP_17259495.1| hypothetical protein HMPREF1203_03712 [Bacteroides fragilis HMW
610]
gi|424665174|ref|ZP_18102210.1| hypothetical protein HMPREF1205_01049 [Bacteroides fragilis HMW
616]
gi|404575038|gb|EKA79783.1| hypothetical protein HMPREF1205_01049 [Bacteroides fragilis HMW
616]
gi|404583790|gb|EKA88463.1| hypothetical protein HMPREF1203_03712 [Bacteroides fragilis HMW
610]
Length = 81
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN +EADL+Q +YGKV S +V+ D TG SK +GF+E D + A AI L
Sbjct: 3 IYVGNLNYRVKEADLQQVMEDYGKVTSCKVIIDRETGRSKGFGFVEMDDDAAATKAIAEL 62
Query: 153 NRQNFQGSEIIV 164
N ++G +++
Sbjct: 63 NGAEYEGRTMVL 74
>gi|365122662|ref|ZP_09339562.1| hypothetical protein HMPREF1033_02908 [Tannerella sp.
6_1_58FAA_CT1]
gi|363642168|gb|EHL81535.1| hypothetical protein HMPREF1033_02908 [Tannerella sp.
6_1_58FAA_CT1]
Length = 81
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
++IG LN +EADL+Q EYG V SV++++D TG SK + F+E + + AI
Sbjct: 2 NIYIGNLNYRVKEADLQQVIEEYGAVESVKIIKDRETGKSKGFAFIEMNNDAQAKQAIEE 61
Query: 152 LNRQNFQGSEIIV 164
LN F+G +IV
Sbjct: 62 LNGSEFEGRTMIV 74
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|336471902|gb|EGO60062.1| hypothetical protein NEUTE1DRAFT_22837, partial [Neurospora
tetrasperma FGSC 2508]
gi|350294903|gb|EGZ75988.1| cyclophilin-like protein, partial [Neurospora tetrasperma FGSC
2509]
Length = 419
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 244 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFED 303
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 304 KKSCEEAYSKMDSVLIDDRRIHVDF 328
>gi|403223125|dbj|BAM41256.1| peptidyl-prolyl cis-trans isomerase [Theileria orientalis strain
Shintoku]
Length = 357
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P LF+ +LN + E DL+ F+ +G V +++D+VTG S +Y F+E++
Sbjct: 44 PDADITPPKNVLFVCKLNPVTEEGDLKIIFSRFGNVKKCDIIKDYVTGDSLQYAFIEFET 103
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
E +C A + I VDF C V WK
Sbjct: 104 EASCNEAYFKMQNVLIDDRRIHVDF-CQSVSGFWK 137
>gi|336259609|ref|XP_003344605.1| hypothetical protein SMAC_06914 [Sordaria macrospora k-hell]
gi|380088682|emb|CCC13416.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 513
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 244 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDAKTGDSLQYAFIEFED 303
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 304 KKSCEEAYYKMDSVLIDDRRIHVDF 328
>gi|346318079|gb|EGX87684.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Cordyceps
militaris CM01]
Length = 505
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD T S +Y F+EYD
Sbjct: 242 PFAEVRPPENVLFVAKLNPVTADEDLELIFGRFGKILSCEVIRDAKTQDSLQYAFIEYDE 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLG--------GGWGG 186
+ +C AA + I VDF R+ W+ GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSRISDVWRNNANNKRRANASRGGWGG 356
>gi|322699404|gb|EFY91166.1| RNA binding protein [Metarhizium acridum CQMa 102]
Length = 490
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C AA + I VDF ++ W+ RR GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRANASRGGWGG 356
>gi|164424346|ref|XP_957404.2| hypothetical protein NCU10166 [Neurospora crassa OR74A]
gi|74619618|sp|Q871A4.1|PPIL4_NEUCR RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|28950237|emb|CAD71104.1| conserved hypothetical protein [Neurospora crassa]
gi|157070475|gb|EAA28168.2| hypothetical protein NCU10166 [Neurospora crassa OR74A]
Length = 494
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 244 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFED 303
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 304 KKSCEEAYSKMDSVLIDDRRIHVDF 328
>gi|357624977|gb|EHJ75550.1| hypothetical protein KGM_17346 [Danaus plexippus]
Length = 666
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD T +S +Y F+E+D
Sbjct: 231 PDAEIAPPENVLFVCKLNPVTTDEDLEIIFSRFGKIVSCEVIRDKKTSNSLQYAFIEFDN 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
+K+C A ++ I VDF W LG G G
Sbjct: 291 KKSCEDAYFKMDNVLIDDRRIHVDFSQSVSKMRW----LGKGRG 330
>gi|322704953|gb|EFY96543.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 490
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDAKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C AA + I VDF ++ W+ RR GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNTKRRANASRGGWGG 356
>gi|406886422|gb|EKD33455.1| hypothetical protein ACD_76C00026G0004 [uncultured bacterium]
Length = 83
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G ++ ++ ++DL + FAE G+V+S ++V D +TG S+ +GF+E ++ AAI+AL
Sbjct: 5 LFVGNISWDATDSDLSKLFAEVGEVVSAQIVMDKLTGRSRGFGFVEMATDELAEAAIKAL 64
Query: 153 NRQNFQGSEIIVD 165
+ ++F G I V+
Sbjct: 65 DGKDFLGRPITVN 77
>gi|255036739|ref|YP_003087360.1| RNP-1 like RNA-binding protein [Dyadobacter fermentans DSM 18053]
gi|254949495|gb|ACT94195.1| RNP-1 like RNA-binding protein [Dyadobacter fermentans DSM 18053]
Length = 241
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 16/119 (13%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G L+ RE++L +AF +YGKV S +++ D +T SK +GF+E E AI AL
Sbjct: 3 IFVGSLSFKLRESELREAFEKYGKVSSAKIIIDKITRQSKGFGFVEMPDEVEARTAINAL 62
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGG-----------GWGGNRNSGQLRFGGRNK 200
N + G ++V+ R +PR GG G G NR G R GG N+
Sbjct: 63 NGADMYGRPLVVNESQKR-----EPRGDGGGSSRPDNRNHEGGGYNREGGYNREGGYNR 116
>gi|258567044|ref|XP_002584266.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905712|gb|EEP80113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 397
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 12/96 (12%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR----YGFLEYDCEK 143
DP RTLF+ RL+ + +E+DLE+ F +G + +R+V D + K+ Y F+ Y+ E+
Sbjct: 99 DPFRTLFVSRLSYDVKESDLEREFGRFGPIERIRIVTDPSNTNPKKKHRGYAFIVYEREQ 158
Query: 144 AC--LAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
IR +R+ ++VD E GR + GWKP
Sbjct: 159 DMKETDGIRIKDRR------VLVDVERGRTVKGWKP 188
>gi|333977917|ref|YP_004515862.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821398|gb|AEG14061.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 85
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
RTL++G L +R DLE+AF+ YG++IS RV+ D TG S+ +GF+E +K A I
Sbjct: 2 VRTLYVGNLPWATRAEDLEEAFSRYGEIISARVITDRQTGRSRGFGFVEV-ADKDADAII 60
Query: 150 RALNRQNFQGSEIIVD 165
ALN F G I V+
Sbjct: 61 AALNGTEFNGRVITVN 76
>gi|116197367|ref|XP_001224495.1| hypothetical protein CHGG_06839 [Chaetomium globosum CBS 148.51]
gi|88178118|gb|EAQ85586.1| hypothetical protein CHGG_06839 [Chaetomium globosum CBS 148.51]
Length = 506
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 244 PFAEVKPPENVLFVCKLNPVTTDDDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFED 303
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 304 QKSCEDAYSKMDSVLIDDRRIHVDF 328
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R++DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + ++ E L++ F E G V+S+++V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMR 75
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN F G + VD C
Sbjct: 76 NLNGYVFGGRPLRVDNAC 93
>gi|408392184|gb|EKJ71543.1| hypothetical protein FPSE_08284 [Fusarium pseudograminearum CS3096]
Length = 485
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C AA + I VDF ++ W+ RR GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRTNAGRGGWGG 356
>gi|410516920|sp|Q4IE79.2|PPIL4_GIBZE RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
Length = 485
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+EY+
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C AA + I VDF ++ W+ RR GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRTNAGRGGWGG 356
>gi|325089001|gb|EGC42311.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 1140
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 61 DGTDTIPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKV 117
D + +P A ++R T P + ++ TLFIG L+ E D+E AFAE G +
Sbjct: 578 DPSPEVPTSPASTESVRQTAFPQETPLADSNSNTTLFIGNLHDAVTEQDVEAAFAEKGFL 637
Query: 118 ISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
V + DF TG +GF+++ C A A+ ALN G I ++F G
Sbjct: 638 GKVNLPHDFSTGKHAGFGFVDFPCFFAASGALHALNGGQLHGQVINLEFNHG 689
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|240280742|gb|EER44246.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
Length = 1140
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 61 DGTDTIPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKV 117
D + +P A ++R T P + ++ TLFIG L+ E D+E AFAE G +
Sbjct: 578 DPSPEVPTSPASTESVRQTAFPQETPLADSNSNTTLFIGNLHDAVTEQDVEAAFAEKGFL 637
Query: 118 ISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
V + DF TG +GF+++ C A A+ ALN G I ++F G
Sbjct: 638 GKVNLPHDFSTGKHAGFGFVDFPCFFAASGALHALNGGQLHGQVINLEFNHG 689
>gi|224083978|ref|XP_002307193.1| predicted protein [Populus trichocarpa]
gi|222856642|gb|EEE94189.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN + + DL F+ +G VIS ++RD+ TG S Y F+E++
Sbjct: 234 PEAETKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVISADIIRDYKTGDSLCYAFIEFET 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++AC A ++ I VDF
Sbjct: 294 KEACELAYFKMDNALIDDRRIHVDF 318
>gi|448516947|ref|XP_003867675.1| U1-70K component of the U1 snRNP [Candida orthopsilosis Co 90-125]
gi|380352014|emb|CCG22238.1| U1-70K component of the U1 snRNP [Candida orthopsilosis]
Length = 300
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+FI RL+ + E D+ Q F ++G + S+ ++RD G S+ YGF+ Y+ + A
Sbjct: 114 DPYKTVFIARLDYSLTELDISQYFRKFGVIDSILIIRDH-QGKSRGYGFIVYERDADAQA 172
Query: 148 AIRALNRQNFQGSE--IIVDFECGRVLPGWKPRRL 180
+ L+R + E I++D E RV WKPRRL
Sbjct: 173 CVSELSRTGAKLKERTILIDIERSRVWRNWKPRRL 207
>gi|406606386|emb|CCH42160.1| hypothetical protein BN7_1705a [Wickerhamomyces ciferrii]
Length = 180
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
LF+ +LN ++ DL F+ +GK++S V+ D TG S +Y F+EY+ +K+C AA
Sbjct: 15 VLFVCKLNPLTKSDDLNIIFSRFGKILSCEVITDKQTGDSLQYAFIEYESKKSCEAAYFK 74
Query: 152 LNRQNFQGSEIIVDF--ECGRVLPGWKP 177
++ I VDF +++ W+P
Sbjct: 75 MDNTLIDERRIHVDFSQSVSKLVENWRP 102
>gi|328866985|gb|EGG15368.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 436
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
+ + +P+R++F+G + + E+DL F+E G+V+S R+V D + YGF EY +
Sbjct: 4 NNAKPNPSRSVFVGNIPYAASESDLVNLFSEVGRVVSFRLVEDRDKKKPRGYGFCEYMDQ 63
Query: 143 KACLAAIRALNRQNFQGSEIIVDF 166
+ L AIR LN + F ++ V +
Sbjct: 64 ETALNAIRLLNNREFNKRQLRVSY 87
>gi|296082685|emb|CBI21690.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + + DL F+ +G VIS ++RDF TG S Y F+E++ +AC A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNEACEQA 300
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 301 YFKMDNALIDDRRIHVDF 318
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAITGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQPLGGRSIVVN 77
>gi|312381256|gb|EFR27046.1| hypothetical protein AND_06483 [Anopheles darlingi]
Length = 749
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + ++DL+ F+ +GK++ V+RD VTG S +Y F+E++
Sbjct: 231 PDADIAPPENVLFVCKLNPVTADSDLQIIFSRFGKIVGCEVIRDKVTGDSLQYAFIEFED 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 291 KKSCETAYFKMDNVLIDDRRIHVDF 315
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G L + ++ L FAE+G V S +V+ D TG SK + F+E C AAI L
Sbjct: 5 IYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAISGL 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNR 188
+ + G I+V+ KPR G G+GGNR
Sbjct: 65 HGMSVDGRSIVVNL--------AKPREEGRGFGGNR 92
>gi|359494535|ref|XP_002266085.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Vitis
vinifera]
Length = 627
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + + DL F+ +G VIS ++RDF TG S Y F+E++ +AC A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNEACEQA 300
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 301 YFKMDNALIDDRRIHVDF 318
>gi|393788491|ref|ZP_10376619.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
gi|392655108|gb|EIY48753.1| hypothetical protein HMPREF1068_02899 [Bacteroides nordii
CL02T12C05]
Length = 115
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FI L+ N ++DL + FAEYG+V S RV+ D TG SK YGF+E E+A AI AL
Sbjct: 3 IFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGNKAISAL 62
Query: 153 NRQNFQGSEIIV 164
N G ++ V
Sbjct: 63 NEAEIDGRKLAV 74
>gi|160901477|ref|YP_001567059.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333917515|ref|YP_004491247.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160367061|gb|ABX38674.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333747715|gb|AEF92892.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 124
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R++DLEQAF+E+G V S +V+ + TG SK +GF+E + AAI+ L
Sbjct: 5 LYVGNLPYTFRDSDLEQAFSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGL 64
Query: 153 NRQNFQGSEIIVD 165
+ QN G +++V+
Sbjct: 65 HGQNRGGRDLVVN 77
>gi|212546053|ref|XP_002153180.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064700|gb|EEA18795.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 454
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFADVKPPENVLFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKKTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLGGGWGG 186
+K C A + I VDF ++ W+ +R GGG+GG
Sbjct: 299 QKDCEQAYFKMEGVLIDDHRIHVDFSQSVSKLSDTWRQATVQKRQGGGFGG 349
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 82 PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE 138
PH + D +TLF+ R+N ++ E+ L + F YG + + +V + TG + Y F+E
Sbjct: 91 PHNDANAQGDAFKTLFVARINYDTTESKLRREFEVYGPIKRIYIVYNKKTGRPRGYAFIE 150
Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 151 YEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|332531199|ref|ZP_08407112.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332039306|gb|EGI75719.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 131
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI L
Sbjct: 5 LYVGNLAYSIRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGL 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLSGRNVVVN 77
>gi|212546055|ref|XP_002153181.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
gi|210064701|gb|EEA18796.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces marneffei ATCC 18224]
Length = 369
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 154 PFADVKPPENVLFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKKTGDSLQYAFIEFEN 213
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLGGGWGG 186
+K C A + I VDF ++ W+ +R GGG+GG
Sbjct: 214 QKDCEQAYFKMEGVLIDDHRIHVDFSQSVSKLSDTWRQATVQKRQGGGFGG 264
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 9/96 (9%)
Query: 71 AILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGH 130
++ +A+RS + LF+G L+ + E+ L++AF++YG VI RV+ D TG
Sbjct: 29 SLFQAIRSM---------SSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGR 79
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
S+ +GF+ + + +A++A++ Q+ G I V++
Sbjct: 80 SRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNY 115
>gi|222618441|gb|EEE54573.1| hypothetical protein OsJ_01776 [Oryza sativa Japonica Group]
Length = 978
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P R LF+ + + E DLE+ F++YG+V S RVVRD +G S+ +GFL + ++ AA
Sbjct: 328 PGRNLFVAGFSYATTERDLEKKFSKYGRVTSARVVRDKRSGDSRGFGFLSLEKDEDADAA 387
Query: 149 IRALNRQNFQGSEIIVD 165
IRA + + G I+V+
Sbjct: 388 IRACDETEWNGRIILVE 404
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 74 RALRSTYKPHT----SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
R L S P T SS LF+G L + L+ AF ++G V+ V++D TG
Sbjct: 11 RVLSSILHPRTLSSMSSPPGGNKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETG 70
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
S+ +GF+ + E A AI ALN Q G EI V++
Sbjct: 71 RSRGFGFITFKEEAAAPGAIEALNGQELDGREIRVNY 107
>gi|294658365|ref|XP_460701.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
gi|202953076|emb|CAG89041.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
Length = 334
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP +T+FI RL+ E D+ + F++YG + S+ +VRD +G S+ YGF+ ++ ++
Sbjct: 113 DPFKTVFISRLDYLLTELDISKNFSKYGVIESITIVRDKKSGKSRGYGFVVFERDEDAKG 172
Query: 148 AIRALNRQNFQ--------GSEIIVDFECGRVLPGWKP 177
I+ L + I+VD E GR++ WKP
Sbjct: 173 CIKELAPTGLKIPVENKPFTRTILVDMERGRLVRNWKP 210
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 144
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q+ G I+V+
Sbjct: 65 NGQSLGGRSIVVN 77
>gi|242824516|ref|XP_002488274.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218713195|gb|EED12620.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLGGGWGG 186
+K C A + I VDF ++ W+ +R GGG+GG
Sbjct: 299 QKDCEQAYFKMEGVLIDDHRIHVDFSQSVSKLSDTWRQATVQKRQGGGFGG 349
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F
Sbjct: 266 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 325
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGW 175
+EY+ E+ +A + + + G ++VD E GR + GW
Sbjct: 326 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 364
>gi|384251916|gb|EIE25393.1| cyclophilin-like protein [Coccomyxa subellipsoidea C-169]
Length = 376
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P+ LF+ +LN + E DLE F+ +G + S ++RD+ TG S Y F+ +D
Sbjct: 230 PEADAKPPSNMLFVCKLNPVTTEEDLEIIFSRFGNITSCDIIRDWKTGDSLCYAFIGFDS 289
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++AC A +N I VDF
Sbjct: 290 DQACEEAYFKMNNCLIDDRRIKVDF 314
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQALGGRSIVVN 77
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 67 PHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
P DRA RA +K S+ P+ TLFIG L E D+ AFAE+G+V VR+ ++
Sbjct: 475 PQDRAESRAKH--FKDERSA--PSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEI 530
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
+G K +G++E+ + A+ +N Q G I +DF R
Sbjct: 531 DSGRPKGFGYVEFVSQDNAAKALETMNGQALGGRPIRIDFAGKR 574
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 78 STYKPHTSSTD-PT-----RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHS 131
ST K T S + PT +TL++G+L+ N L+ F +YG V+ RV D +G S
Sbjct: 375 STKKSKTDSNENPTHDNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRS 434
Query: 132 KRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
+ +G++++ L A + + + G + VD + R
Sbjct: 435 RGFGYVDFATSAEALRASKEAHGKELDGRALRVDLQPAR 473
>gi|427798067|gb|JAA64485.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Rhipicephalus pulchellus]
Length = 377
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+
Sbjct: 15 VRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAM 74
Query: 150 RALNRQNFQGSEIIVD 165
R LN + G + VD
Sbjct: 75 RNLNAFDLNGRPLRVD 90
>gi|406896127|gb|EKD40506.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 92
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L+ E+DL+Q F E+GKV S ++ D +G SK +GF+E D + +A+ AL
Sbjct: 3 LYVGNLSYEISESDLKQMFEEFGKVGSASIIMDKYSGQSKGFGFVEMDSQTEAQSAMEAL 62
Query: 153 NRQNFQGSEIIVD 165
N ++ +G +IV+
Sbjct: 63 NGKDVKGRTLIVN 75
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQAF+++G V S RV+ + TG SK +GF+E + AA++ +
Sbjct: 5 LYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSLVVN 77
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQAF+++G V S RV+ + TG SK +GF+E + AA++ +
Sbjct: 5 LYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSLVVN 77
>gi|225561665|gb|EEH09945.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 423
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 72 ILRALRSTYKPHTSSTDPT------RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
I R L K + + DP +TLF+ RL+ + EADLE+ F +G + +R+V D
Sbjct: 77 IERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVD 136
Query: 126 FVTGHSKR--------YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
T + K+ Y F+ Y+ E+ AA + + + ++VD E GR + GWKP
Sbjct: 137 --THNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKP 194
Query: 178 R 178
R
Sbjct: 195 R 195
>gi|240275269|gb|EER38783.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 421
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 72 ILRALRSTYKPHTSSTDPT------RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
I R L K + + DP +TLF+ RL+ + EADLE+ F +G + +R+V D
Sbjct: 77 IERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVD 136
Query: 126 FVTGHSKR--------YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
T + K+ Y F+ Y+ E+ AA + + + ++VD E GR + GWKP
Sbjct: 137 --THNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKP 194
Query: 178 R 178
R
Sbjct: 195 R 195
>gi|410095935|ref|ZP_11290927.1| hypothetical protein HMPREF1076_00105 [Parabacteroides goldsteinii
CL02T12C30]
gi|409227966|gb|EKN20861.1| hypothetical protein HMPREF1076_00105 [Parabacteroides goldsteinii
CL02T12C30]
Length = 81
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
++IG LN RE DL+Q EYG V SV++++D TG SK + F+E + A AI
Sbjct: 2 NIYIGNLNYRVREEDLKQVMEEYGVVDSVKIIKDRETGKSKGFAFVEMPDDAAAKKAIGE 61
Query: 152 LNRQNFQGSEIIV 164
LN F+G +++V
Sbjct: 62 LNEAEFEGRQMVV 74
>gi|121607152|ref|YP_994959.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551792|gb|ABM55941.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 122
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+ +
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAQAQAAIQGV 64
Query: 153 NRQNFQGSEIIVD 165
+ QNF G +++V+
Sbjct: 65 HGQNFGGRDLVVN 77
>gi|67904216|ref|XP_682364.1| hypothetical protein AN9095.2 [Aspergillus nidulans FGSC A4]
gi|74592360|sp|Q5ARI5.1|PPIL4_EMENI RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|40742738|gb|EAA61928.1| hypothetical protein AN9095.2 [Aspergillus nidulans FGSC A4]
gi|259485493|tpe|CBF82562.1| TPA: Peptidyl-prolyl cis-trans isomerase-like 4
(PPIase)(Rotamase)(EC 5.2.1.8)
[Source:UniProtKB/Swiss-Prot;Acc:Q5ARI5] [Aspergillus
nidulans FGSC A4]
Length = 461
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFES 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLG------GGWGG 186
+K C A + I VDF ++ W+ + GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRDATVKKRSAQRGGFGG 351
>gi|393784278|ref|ZP_10372444.1| hypothetical protein HMPREF1071_03312 [Bacteroides salyersiae
CL02T12C01]
gi|392666318|gb|EIY59833.1| hypothetical protein HMPREF1071_03312 [Bacteroides salyersiae
CL02T12C01]
Length = 115
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FI L+ N ++DL + FAEYG+V S RV+ D TG SK YGF+E E+A AI AL
Sbjct: 3 IFIAGLSYNISDSDLTELFAEYGEVASARVISDRETGRSKGYGFVEMADEEAGDKAIAAL 62
Query: 153 NRQNFQGSEIIV 164
N G ++ V
Sbjct: 63 NEAEVDGRKLAV 74
>gi|297847776|ref|XP_002891769.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
gi|297337611|gb|EFH68028.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
lyrata]
Length = 508
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL F+ +G V+S V+RDF TG S Y F+E++
Sbjct: 234 PEAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFEN 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++AC A ++ I VDF
Sbjct: 294 KEACEQAYFKMDNALIDDRRIHVDF 318
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R++DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|53804863|ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
gi|53758624|gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G LN +ADLE+ FA YG V S +VV D TG S+ +GF+E ++ AAI L
Sbjct: 5 LYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIAGL 64
Query: 153 NRQNFQGSEIIVD 165
N + G ++V+
Sbjct: 65 NGKEMDGRNLMVN 77
>gi|407925279|gb|EKG18294.1| hypothetical protein MPH_04489 [Macrophomina phaseolina MS6]
Length = 360
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +G ++S ++RD TG S +Y F+E++
Sbjct: 140 PFAEVKPPENVLFVCKLNPVTQDEDLELIFSRFGTILSCEIIRDKQTGDSLQYAFIEFED 199
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKP-------RRLGGGWGG 186
+K+C A + I VDF ++ W+ R GGG+GG
Sbjct: 200 KKSCEQAYFKMQDVLIDDHRIHVDFSQSVSKLSNVWRDATNDKRKRAHGGGFGG 253
>gi|241766570|ref|ZP_04764427.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363174|gb|EER58765.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 125
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+ +
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGV 64
Query: 153 NRQNFQGSEIIVD 165
+ QNF G +++V+
Sbjct: 65 HGQNFGGRDLVVN 77
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQALGGRSIVVN 77
>gi|68063587|ref|XP_673789.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491891|emb|CAH97044.1| conserved hypothetical protein [Plasmodium berghei]
Length = 431
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ + P LF+ +LN + E DL+ F +G +IS +V+D VT +S +Y F+E++
Sbjct: 129 PNANLKPPENILFVCKLNPITEEEDLKTIFLRFGPIISCNIVKDKVTNNSLQYAFIEFEK 188
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRV------LPGWK 176
++ CL A ++ I VDF C + +P WK
Sbjct: 189 KEDCLNAYFEMDNVVIDDRRIHVDF-CQSLSKYKSDMPKWK 228
>gi|19112686|ref|NP_595894.1| RRM-containing cyclophilin regulating transcription Rct1
[Schizosaccharomyces pombe 972h-]
gi|74626013|sp|Q9UUE4.1|PPIL4_SCHPO RecName: Full=Peptidyl-prolyl cis-trans isomerase cyp6;
Short=PPIase cyp6; AltName: Full=Rotamase cyp6
gi|5738526|emb|CAB52803.1| RRM-containing cyclophilin regulating transcription Rct1
[Schizosaccharomyces pombe]
Length = 432
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK+IS +V+RD TG S +Y F+E+D
Sbjct: 235 PFAHVAPPENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDN 294
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+++ A + S I VDF
Sbjct: 295 KESVEKAYFKMQNVLIDDSRIHVDF 319
>gi|340373951|ref|XP_003385503.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Amphimedon queenslandica]
Length = 444
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN + DLE F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 231 PDADAKPPENVLFVCKLNPATSSEDLEIIFSRFGPILSCEVIRDQKTGDSLQYAFIEFET 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
E C+ A ++ I VDF
Sbjct: 291 EDDCIKAYFKMDNVLIDDRRIHVDF 315
>gi|395005502|ref|ZP_10389379.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394316555|gb|EJE53276.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 130
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+ +
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGV 64
Query: 153 NRQNFQGSEIIVD 165
+ QNF G +++V+
Sbjct: 65 HGQNFGGRDLVVN 77
>gi|295670647|ref|XP_002795871.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284956|gb|EEH40522.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 409
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR--------YGFLEY 139
D +TLF+ RL+ + EADLE+ F +G + +R+V D T + K+ Y F+ Y
Sbjct: 99 DAFKTLFVSRLSYDVVEADLEREFGRFGPIERIRIVVD--THNPKKNPKKPHRGYAFIVY 156
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ EK AA + + + ++VD E GR + GWKPR
Sbjct: 157 EREKDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 195
>gi|154283073|ref|XP_001542332.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410512|gb|EDN05900.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 371
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 72 ILRALRSTYKPHTSSTDPT------RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
I R L K + + DP +TLF+ RL+ + EADLE+ F +G + +R+V D
Sbjct: 77 IERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVD 136
Query: 126 F--VTGHSKR----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
++K+ Y F+ Y+ E+ AA + + + ++VD E GR + GWKPR
Sbjct: 137 THNPKNNAKKPHRGYAFIVYEREQDMKAAYKVTDGIRIKDRRVLVDVERGRTVKGWKPR 195
>gi|241997552|ref|XP_002433425.1| RNA recognition motif-containing protein [Ixodes scapularis]
gi|215490848|gb|EEC00489.1| RNA recognition motif-containing protein [Ixodes scapularis]
Length = 466
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+
Sbjct: 15 VRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYKDQETALSAM 74
Query: 150 RALNRQNFQGSEIIVD 165
R LN + G + VD
Sbjct: 75 RNLNAFDLNGRPLRVD 90
>gi|402072266|gb|EJT68130.1| peptidyl-prolyl cis-trans isomerase-like 4 protein, partial
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 366
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +R+ DLE F+ +GKV+S V+RD +G S +Y F+E++
Sbjct: 256 PFAEVKPPENVLFVCKLNPVTRDEDLELIFSRFGKVLSCEVIRDARSGDSLQYAFIEFED 315
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+ AC A + I VDF
Sbjct: 316 KDACEMAYFKMQGVLIDDRRIHVDF 340
>gi|226295399|gb|EEH50819.1| hypothetical protein PADG_06898 [Paracoccidioides brasiliensis
Pb18]
Length = 417
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR--------YGFLEY 139
D +TLF+ RL+ + EADLE+ F +G + +R+V D T + K+ Y F+ Y
Sbjct: 99 DAFKTLFVSRLSYDVVEADLEREFGRFGPIERIRIVVD--THNPKKNPKKSHRGYAFIVY 156
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ EK AA + + + ++VD E GR + GWKPR
Sbjct: 157 EREKDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 195
>gi|71029664|ref|XP_764475.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351429|gb|EAN32192.1| hypothetical protein, conserved [Theileria parva]
Length = 324
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+T+F+GRL + E DL F V +VR+VRD VT SK +GF+ +D A + AIR
Sbjct: 203 KTVFVGRLPPTANEDDLYNIFMNISPVKAVRIVRDPVTMKSKGFGFVAFDNRPAVVEAIR 262
Query: 151 ALNRQNFQG 159
LN F+G
Sbjct: 263 ELNNTEFKG 271
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ L+QAFA++G V S +V+ D TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q +G I+V+
Sbjct: 65 NGQPLEGRAIVVN 77
>gi|71417883|ref|XP_810688.1| U1 small nuclear ribonucleoprotein [Trypanosoma cruzi strain CL
Brener]
gi|70875259|gb|EAN88837.1| U1 small nuclear ribonucleoprotein, putative [Trypanosoma cruzi]
Length = 274
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 47 PYCITYDPIQA-GSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREA 105
P DP + G+ D H + R+ Y TDP T+ + L+ S E
Sbjct: 82 PTMTKTDPPEGDGAKSKQDVWKHKMMLEMERRNPYTDINIRTDPRSTVVVSSLHPKSLEE 141
Query: 106 DLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVD 165
D+ ++G+V+SVR++ D G S+RYGF+++ E A+ ++ G ++++
Sbjct: 142 DIRLFGEQFGRVVSVRLICDH-NGKSRRYGFVQFGLEAEARKAVAHSRKRRLHGHAVVME 200
Query: 166 FECGRVLPGWKPRRLG 181
E GR+ + P+RL
Sbjct: 201 MERGRLDRDFLPKRLA 216
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R++DLEQAF+++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|120613407|ref|YP_973085.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591871|gb|ABM35311.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 123
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+
Sbjct: 5 LYVGNLPYSFRDDDLQQTFSQYGSVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGA 64
Query: 153 NRQNFQGSEIIVD 165
+ QNF G +++V+
Sbjct: 65 HGQNFGGRDLVVN 77
>gi|366999594|ref|XP_003684533.1| hypothetical protein TPHA_0B04300 [Tetrapisispora phaffii CBS 4417]
gi|357522829|emb|CCE62099.1| hypothetical protein TPHA_0B04300 [Tetrapisispora phaffii CBS 4417]
Length = 334
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 84 TSSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
+S+ P +T LF+ +LN + DL Q F+ +G++ISV +VRD TG S YGF+E+D E
Sbjct: 234 SSTIKPLKTVLFVCKLNAMTNAKDLAQIFSRFGQIISVEIVRDKDTGRSLGYGFIEFDSE 293
Query: 143 KACLAAIRALNRQNFQGSEIIVDF 166
A A + +I VDF
Sbjct: 294 GAVELAYSNMEGVIIDDKKIHVDF 317
>gi|398407635|ref|XP_003855283.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
gi|339475167|gb|EGP90259.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
Length = 603
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRA------LRSTYKPHTSST---DPTRTLFIGRLNKNSR 103
DPI ++ D + D+A +A ++ YKP D RT+FIGRL
Sbjct: 57 DPISESWLERRDRLTRDKAAKQAWVTGEGVKELYKPTEDENIRGDAFRTIFIGRLPYTCT 116
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCEKACLAAIRALNRQNFQ 158
DLE F +G + VR+V D SK+ Y F+ ++ E+ AA + R +
Sbjct: 117 TKDLEHEFGRFGPIERVRIVTDRSEKPSKKGTSRGYAFVLFESERDMKAAYKESERLLIR 176
Query: 159 GSEIIVDFECGRVLPGWKPR 178
++VD E GR + GW+PR
Sbjct: 177 NRPVLVDVERGRTVTGWRPR 196
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
R++F+G + ++ E L++ F E G V+S+++V D TG K YGF EY ++ L+A+
Sbjct: 15 MRSVFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAM 74
Query: 150 RALNRQNFQGSEIIVDFEC 168
R LN F G + VD C
Sbjct: 75 RNLNGYVFGGRPLRVDNAC 93
>gi|413943391|gb|AFW76040.1| hypothetical protein ZEAMMB73_700062 [Zea mays]
Length = 555
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 25 SSQTVEPRDAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHT 84
+S T +PRD + + + W P T P + + + + IL +L P
Sbjct: 179 NSPTGKPRD-EVAEERLEDTWVPLDQTVAPEELEEMIRSKEAHTNAVILESLADI--PDA 235
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
P LF+ +LN +++ DL F+ +G V S ++RD+ TG S Y F+E+D ++A
Sbjct: 236 EVKPPDNVLFVCKLNPVTQDEDLYTIFSRFGTVTSAEIIRDYKTGDSLCYAFIEFDTKEA 295
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
C A ++ I VDF
Sbjct: 296 CERAYFKMDNCLIDDRRIHVDF 317
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L+ ++ E L+ AF++YG VI+VRV+ TG SK +GF+++ E AA++ L
Sbjct: 61 LFIGGLSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKL 120
Query: 153 NRQNFQGSEIIVDF 166
N Q G I V +
Sbjct: 121 NGQVLDGRNIRVHY 134
>gi|340959550|gb|EGS20731.1| U1 small nuclear ribonucleoprotein 70 kDa-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 387
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 78 STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR- 133
Y PH D +TL + RL+ + E DLE+ F +G + +R++RD H K
Sbjct: 86 KNYNPHADPNIRGDAFKTLIVARLSYEADEKDLEREFGRFGPIERIRLIRD-THAHEKPN 144
Query: 134 --------YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y F+ ++ EK AA+ + +G I VD E GR + GWKPR
Sbjct: 145 KKIKPHRGYAFVVFEREKDMRAALEGCDGIRIKGRLIKVDVERGRTVKGWKPR 197
>gi|313149541|ref|ZP_07811734.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138308|gb|EFR55668.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 81
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN +EADL+Q +YG+V S +V+ D TG SK +GF+E D + A AI L
Sbjct: 3 IYVGNLNYRVKEADLQQVMEDYGEVTSCKVIIDRETGRSKGFGFVEMDDDAAATKAIAEL 62
Query: 153 NRQNFQGSEIIV 164
N ++G +++
Sbjct: 63 NGAEYEGRTMVL 74
>gi|123976178|ref|XP_001314467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896817|gb|EAY01957.1| hypothetical protein TVAG_430980 [Trichomonas vaginalis G3]
Length = 199
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 81 KPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYD 140
K + S T T+ +G L+ ++ E L+ FAE+G V++ R+ R TG SK +GF+E+
Sbjct: 25 KNDSESKSSTVTIHVGNLSFDTTEESLKAKFAEFGNVVTCRIPRRTRTGKSKSFGFVEFS 84
Query: 141 CEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
++ AI+ +N + F+G + ++ G KPRR
Sbjct: 85 TKEDADKAIKEMNEKEFEGRTLKIEISNG---LSDKPRR 120
>gi|209875787|ref|XP_002139336.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554942|gb|EEA04987.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP+ TL++ RL+ ++E DL + F EYGKV R+V + ++G S+ +GF+ C +
Sbjct: 75 DPSSTLYVCRLSLRTKEDDLRRLFEEYGKVTDCRLVTNPLSGESRCFGFVTMSCPEEAAR 134
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
A AL+ + +Q + + V E R ++P
Sbjct: 135 ARDALDCKEYQDANLKV--EMARRAKPYEP 162
>gi|167388415|ref|XP_001738557.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898157|gb|EDR25101.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 164
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LFI ++N + E DLE+ F +YGK+ SV ++RD T S YGF+E++
Sbjct: 32 PFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTKKSLGYGFIEFET 91
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ C A + ++ I VDF
Sbjct: 92 KEGCENAYQKMDNVIIDERRIHVDF 116
>gi|407863075|gb|EKG07868.1| U1 small nuclear ribonucleoprotein, putative [Trypanosoma cruzi]
Length = 274
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 47 PYCITYDPIQA-GSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREA 105
P DP + G+ D H + R+ Y TDP T+ + L+ S E
Sbjct: 82 PTMTKTDPPEGDGAKSKQDVWKHKMMLEMERRNPYTDINIRTDPRSTVVVSSLHPKSLEE 141
Query: 106 DLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVD 165
D+ ++G+V+SVR++ D G S+RYGF+++ E A+ ++ G ++++
Sbjct: 142 DIRLFGEQFGRVVSVRLICDH-NGKSRRYGFVQFGLEAEARKAVAHSRKRRLHGHAVVME 200
Query: 166 FECGRVLPGWKPRRLG 181
E GR+ + P+RL
Sbjct: 201 MERGRLDRDFLPKRLA 216
>gi|190345461|gb|EDK37350.2| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP TLFI RL+ + E ++ Q+F+ +G + S+R++RD G SK YGF+ ++ +
Sbjct: 114 DPYCTLFIARLDYDVTEVEVSQSFSRFGAIASIRIIRDN-EGKSKGYGFVVFERDTDAAT 172
Query: 148 AIRALNRQNFQ-GSE--------IIVDFECGRVLPGWKP 177
+R L + G E +VD E RV+ WKP
Sbjct: 173 CVRELASTGIKIGPESSDRKPRTALVDIERSRVIRNWKP 211
>gi|195996029|ref|XP_002107883.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
gi|190588659|gb|EDV28681.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
Length = 342
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 71 AILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
A L+ + + PH + + DP +TL + RL+ ++ E+ L + YG V SVR + D +
Sbjct: 79 AKLQKDLAQWDPHNNPKGTEDPFKTLLVSRLSYDTTESKLRRELEAYGSVKSVRSIYD-L 137
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRL 180
+G K Y F+E++ E+ AA + + + G I+VD E R + W PRRL
Sbjct: 138 SGKPKGYAFVEFEHERDMKAAYKYADGKKVDGRRILVDVERSRTVKNWLPRRL 190
>gi|443897423|dbj|GAC74764.1| hsp27-ere-tata-binding protein/Scaffold attachment factor
[Pseudozyma antarctica T-34]
Length = 285
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
+T +P L + L+K + E DLE+AF +YG + +V+ D T + + F+ Y+
Sbjct: 66 NTGDNNPGNNLHVSGLSKTTTERDLEEAFGKYGAIQRAQVMYDPHTREPRGFAFVTYEKA 125
Query: 143 KACLAAIRALNRQNFQGSEIIVD 165
+ AAI A+N +FQG +I VD
Sbjct: 126 EDAEAAITAMNGSDFQGRKITVD 148
>gi|342874886|gb|EGU76793.1| hypothetical protein FOXB_12690 [Fusarium oxysporum Fo5176]
Length = 801
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK++S V+RD TG S +Y F+E++
Sbjct: 328 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEFED 387
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
+ +C AA + I VDF ++ W+ RR GGWGG
Sbjct: 388 KASCEAAYFKMQDVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRATAHRGGWGG 442
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFIG L+ + E D+ AF+E+G+V VR+ +D +G K +G++E+ +++ AA
Sbjct: 304 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 363
Query: 149 IRALNRQNFQGSEIIVDF 166
+ A+ Q G + +DF
Sbjct: 364 LDAMTGQELAGRPLRLDF 381
>gi|324564529|gb|ADY49874.1| Cleavage stimulation factor subunit 2 tau variant, partial [Ascaris
suum]
Length = 82
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+R++F+G L ++RE D+ F + G V++VR+V D TG + +GF E++ E A A+
Sbjct: 2 SRSIFVGNLPYSAREEDIADFFGQVGSVVNVRIVFDRETGRPRGFGFCEFETEDAAERAV 61
Query: 150 RALNRQNFQGSEIIVD 165
++N +F G +I VD
Sbjct: 62 GSMNNADFMGRQIRVD 77
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ L++G L+ N+ E +L F++YG V SV+++ D TG+SK +GF+E E+ AAIR
Sbjct: 3 KKLYVGNLSYNTYEDNLRTLFSQYGTVESVKIITDRDTGNSKGFGFVEMSTEEEAQAAIR 62
Query: 151 ALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
N + G I V+ KPRR
Sbjct: 63 GTNSTDLDGRSIKVNEAMD------KPRR 85
>gi|146419632|ref|XP_001485777.1| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP TLFI RL+ + E ++ Q+F+ +G + S+R++RD G SK YGF+ ++ +
Sbjct: 114 DPYCTLFIARLDYDVTEVEVSQSFSRFGAIASIRIIRDN-EGKSKGYGFVVFERDTDAAT 172
Query: 148 AIRALNRQNFQ-GSE--------IIVDFECGRVLPGWKP 177
+R L + G E +VD E RV+ WKP
Sbjct: 173 CVRELASTGIKIGPESSDRKPRTALVDIERSRVIRNWKP 211
>gi|195452564|ref|XP_002073409.1| GK13166 [Drosophila willistoni]
gi|194169494|gb|EDW84395.1| GK13166 [Drosophila willistoni]
Length = 594
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LFI +LN + + DLE F+ +G V V+RD TG S +Y F+E+D
Sbjct: 231 PDAEMAPPENVLFICKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFDE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G G+L F
Sbjct: 291 QKSCEAAYFKMDNVLVDDRRIHVDFSQSVAKIKWR----GKGRGIEGPEGRLDF 340
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP+ LFI L+K + L++AFA++G+VI RVV D VTG SK +GF+ Y +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAK 92
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLP 173
I ++ + G I ++ R P
Sbjct: 93 GIEGMDGKFLDGWVIFAEYARPRTPP 118
>gi|167390856|ref|XP_001739535.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896809|gb|EDR24136.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 351
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LFI ++N + E DLE+ F +YGK+ SV ++RD T S YGF+E++
Sbjct: 219 PFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTKKSLGYGFIEFET 278
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ C A + ++ I VDF
Sbjct: 279 KEGCENAYQKMDNVIIDERRIHVDF 303
>gi|319765041|ref|YP_004128978.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827233|ref|YP_004390536.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119602|gb|ADV02091.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312605|gb|AEB87020.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 116
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQ F++YG V S +V+ + TG SK +GF+E + AAI+
Sbjct: 5 LYVGNLPYSFRDQDLEQTFSQYGSVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGA 64
Query: 153 NRQNFQGSEIIVD 165
+ QN+ G +++V+
Sbjct: 65 HGQNYGGRDLVVN 77
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 48/74 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L+ + E+ L++ F++YG+VI RV+ D TG S+ +GF+ + + +A++A+
Sbjct: 42 LFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAM 101
Query: 153 NRQNFQGSEIIVDF 166
+ Q+ G I V++
Sbjct: 102 DGQDLHGRRIKVNY 115
>gi|338729372|ref|XP_001492640.3| PREDICTED: cleavage stimulation factor subunit 2 [Equus caballus]
Length = 601
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVIS----VRVVRDFVTGHSKRYGFLEYDCEKACL 146
R++F+G + + E L+ F+E G V+S +R+V D TG K YGF EY ++ L
Sbjct: 16 RSVFVGNIPYEATEEQLKDVFSEVGPVVSSGRVIRLVYDRETGKPKGYGFCEYQDQETAL 75
Query: 147 AAIRALNRQNFQGSEIIVD 165
+A+R LN + F G + VD
Sbjct: 76 SAMRNLNGREFSGRALRVD 94
>gi|213401953|ref|XP_002171749.1| peptidyl-prolyl cis-trans isomerase cyp6 [Schizosaccharomyces
japonicus yFS275]
gi|211999796|gb|EEB05456.1| peptidyl-prolyl cis-trans isomerase cyp6 [Schizosaccharomyces
japonicus yFS275]
Length = 416
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S ++VRD TG S +Y F+E+D
Sbjct: 237 PFAHVAPPENVLFVCKLNPVTQDEDLELIFSRFGKIVSCKIVRDKKTGDSLQYAFIEFDN 296
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+++ A + S I VDF
Sbjct: 297 KESVERAYFKMQNVLIDDSRIHVDF 321
>gi|167388419|ref|XP_001733426.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898159|gb|EDR25103.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 385
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LFI ++N + E DLE+ F +YGK+ SV ++RD T S YGF+E++
Sbjct: 219 PFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKTKKSLGYGFIEFET 278
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ C A + ++ I VDF
Sbjct: 279 KEGCENAYQKMDNVIIDERRIHVDF 303
>gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus]
Length = 378
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F
Sbjct: 19 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 78
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 79 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 120
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 1 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 60
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 61 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 103
>gi|156088129|ref|XP_001611471.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798725|gb|EDO07903.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 271
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + DL+ F+ +G V+S V+RD+ TG S +Y F+E++
Sbjct: 41 PDADVAPPKNVLFVCKLNPVTEADDLKLIFSRFGPVVSCDVIRDYKTGDSLQYAFVEFES 100
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
E +C A + I VDF C V WK
Sbjct: 101 EDSCNDAYFRMQNVLIDDRRIHVDF-CQSVSGFWK 134
>gi|342885914|gb|EGU85866.1| hypothetical protein FOXB_03714 [Fusarium oxysporum Fo5176]
Length = 391
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 72 ILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVT 128
+LR +KP+ D +TL + RL+ ++ E DLE+ F YG + +R+V D
Sbjct: 80 LLREAPDHHKPNEDPNVRGDAFKTLMVARLSYDADERDLEKEFGRYGPIERIRIVVD-TH 138
Query: 129 GHSKR---------YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
H K Y F+ ++ EK AA+ A + + I VD E GR + GWKPR
Sbjct: 139 AHEKPNKKKKPHRGYAFVVFEREKDMRAALDACDGMRIKDRRIKVDVERGRTVKGWKPR 197
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN + E L Q F +YG+V SV+++ D +G SK +GF+E E+A AAI AL
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAISAL 64
Query: 153 NRQNFQGSEIIVD 165
N+ +G ++ V+
Sbjct: 65 NQHELEGRQLRVN 77
>gi|348667221|gb|EGZ07047.1| hypothetical protein PHYSODRAFT_251824 [Phytophthora sojae]
Length = 419
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L++ F+E G V++ R+V D TG K YGF EY L+A+R
Sbjct: 13 RSVFVGNIPYDVTEDMLKEIFSEAGSVVNFRLVTDRETGKPKGYGFCEYADGATALSAMR 72
Query: 151 ALNRQNFQGSEIIVDFECG 169
LN G + VDF G
Sbjct: 73 NLNGYEINGRNLRVDFADG 91
>gi|297620951|ref|YP_003709088.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|297376252|gb|ADI38082.1| RNA-binding protein [Waddlia chondrophila WSU 86-1044]
gi|337293226|emb|CCB91217.1| putative RNA-binding protein rbpA [Waddlia chondrophila 2032/99]
Length = 92
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L+ E + FA +G+V+S +++ D TG SK +GF+E+ ++A AI+ L
Sbjct: 3 LYVGNLSYRVSEDQFKDYFASFGEVLSAKIITDRFTGQSKGFGFVEFADKEAAEEAIKEL 62
Query: 153 NRQNFQGSEIIVD 165
N NF+G I+V+
Sbjct: 63 NGSNFEGRSIVVN 75
>gi|340939091|gb|EGS19713.1| peptidyl-prolyl cis-trans isomerase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 507
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 246 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDRKTGDSLQYAFIEFED 305
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 306 KKSCEEAYFKMDGVLIDDRRIHVDF 330
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 82 PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE 138
PH + D +TLF+ R+N ++ E+ L + F YG + + +V + +G + Y F+E
Sbjct: 91 PHNDTNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYMVYNKHSGKPRGYAFIE 150
Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 151 YEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|326319544|ref|YP_004237216.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376380|gb|ADX48649.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 124
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGNVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGA 64
Query: 153 NRQNFQGSEIIVD 165
+ QNF G +++V+
Sbjct: 65 HGQNFGGRDLVVN 77
>gi|296811732|ref|XP_002846204.1| peptidyl-prolyl cis-trans isomerase-like 4 [Arthroderma otae CBS
113480]
gi|238843592|gb|EEQ33254.1| peptidyl-prolyl cis-trans isomerase-like 4 [Arthroderma otae CBS
113480]
Length = 478
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 266 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGKILSCEVIRDKKTGDSLQYAFIEFED 325
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGGNRN 189
+K C A + I VDF ++ W+ +R G GG+GG N
Sbjct: 326 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRTATNAKRSGQRGGFGGISN 381
>gi|325091104|gb|EGC44414.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 452
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 72 ILRALRSTYKPHTSSTDPT------RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
I R L K + + DP +TLF+ RL+ + EADLE+ F +G + +R+V D
Sbjct: 77 IERHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVD 136
Query: 126 FVTGHSKR--------YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
T + K+ Y F+ Y+ E+ AA + + + ++VD E GR + GWKP
Sbjct: 137 --THNPKKNAKKPHRGYAFIVYEREQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKP 194
Query: 178 R 178
R
Sbjct: 195 R 195
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP+ LFI L+K + L++AFA++G+VI RVV D VTG SK +GF+ Y +
Sbjct: 33 DPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAK 92
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLP 173
I ++ + G I ++ R P
Sbjct: 93 GIEGMDGKFLDGWVIFAEYARPRTPP 118
>gi|158297018|ref|XP_317325.4| AGAP008136-PA [Anopheles gambiae str. PEST]
gi|157014993|gb|EAA12690.4| AGAP008136-PA [Anopheles gambiae str. PEST]
Length = 676
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL+ F+ +GK++ V+RD +TG S +Y F+E++
Sbjct: 231 PDADIAPPENVLFVCKLNPVTTDDDLQIIFSRFGKIVGCEVIRDKLTGDSLQYAFIEFEN 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 291 QKSCEDAYFKMDNVLIDDRRIHVDF 315
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 75 ALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
AL Y + + DP +TLF+ R+N ++ E+ L + F +G + + +V + +TG + Y
Sbjct: 86 ALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRREFEVFGPIKKIVIVHNKITGKPRGY 145
Query: 135 GFLEYDCEK---------------------------ACLAAIRALNRQNFQGSEIIVDFE 167
F+EY+ E+ AA + + + G ++VD E
Sbjct: 146 AFVEYEHERDMHSAYKHADGKKIDGRRVLVDVERGXVLSAAYKHADGKKIDGRRVLVDVE 205
Query: 168 CGRVLPGWKPR 178
GR + GW PR
Sbjct: 206 RGRTVKGWLPR 216
>gi|71661992|ref|XP_818009.1| U1 small nuclear ribonucleoprotein [Trypanosoma cruzi strain CL
Brener]
gi|70883235|gb|EAN96158.1| U1 small nuclear ribonucleoprotein, putative [Trypanosoma cruzi]
Length = 274
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 51 TYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQA 110
T P G+ D H + R+ Y TDP T+ + L+ S E D+
Sbjct: 87 TEPPEGDGAKSKQDVWKHKMMLEMERRNPYTDINIRTDPRSTVVVSSLHPKSLEEDIRLF 146
Query: 111 FAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
++G+V+SVR++ D G S+RYGF+++ E A+ ++ G ++++ E GR
Sbjct: 147 GEQFGRVVSVRLICDH-NGKSRRYGFVQFGLEAEARKAVAHSRKRRLHGHAVVMEMERGR 205
Query: 171 VLPGWKPRRLG 181
+ + P+RL
Sbjct: 206 LDRDFLPKRLA 216
>gi|453087961|gb|EMF16002.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 348
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 77 RSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF---VTGH 130
+ YKP D +TLF+GRL + DLE+ F +G + VR+V D G
Sbjct: 87 KEMYKPGEDENIRGDAFKTLFVGRLPYDCTTKDLEKEFGRFGPIERVRIVTDRSEKAKGK 146
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ Y F+ ++ EK AA + R +G ++VD E GR + GW+PR
Sbjct: 147 PRGYAFILFEREKDMKAAYKECERLQIRGRMVLVDVERGRTVTGWRPR 194
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH S D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F
Sbjct: 89 WDPHNDSNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 148
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F
Sbjct: 40 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 99
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 100 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 141
>gi|324514401|gb|ADY45855.1| Cleavage stimulation factor subunit 2 [Ascaris suum]
Length = 324
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 81 KPHTSSTD-PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY 139
K TSS D R++F+G ++ E L+Q F++ G V+ +R+V D TG K YGF EY
Sbjct: 12 KTSTSSADRSARSVFVGNISYEVGEEQLKQVFSQVGPVVHLRLVHDRETGKPKGYGFCEY 71
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECG 169
+ + +AIR LN G ++ VD G
Sbjct: 72 NDPQTAESAIRNLNGYELNGRQLRVDSAAG 101
>gi|209877070|ref|XP_002139977.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type family
protein [Cryptosporidium muris RN66]
gi|209555583|gb|EEA05628.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type family
protein [Cryptosporidium muris RN66]
Length = 419
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LFI +LN + E DLE F+ +G+++S +V D+ TG S +Y F+E++
Sbjct: 294 PDADIKPPENVLFICKLNPTTTEEDLELIFSRFGRILSCNIVYDWKTGESLQYAFIEFER 353
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
++ C A+ + I VDF C V W R
Sbjct: 354 KQDCELALTKMQGVIIDDRRIHVDF-CQSVSKQWYEYR 390
>gi|345561207|gb|EGX44303.1| hypothetical protein AOL_s00193g31 [Arthrobotrys oligospora ATCC
24927]
Length = 481
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 240 PFADVKPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDQRTGDSLQYAFIEFET 299
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ C A ++ I VDF
Sbjct: 300 QQDCEQAYFKMDGVLIDDHRIHVDF 324
>gi|345870896|ref|ZP_08822845.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921050|gb|EGV31774.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+++G L+ N+ ++DL +AFA +G+V V ++ D TG SK +GF+E AAI+
Sbjct: 2 NIYVGNLSYNTTDSDLREAFAPFGEVAQVNLISDKFTGQSKGFGFVEMPNNSHADAAIKG 61
Query: 152 LNRQNFQGSEIIVD 165
LN + QG I V+
Sbjct: 62 LNGTDLQGRSIKVN 75
>gi|402587151|gb|EJW81087.1| hypothetical protein WUBG_08006 [Wuchereria bancrofti]
Length = 334
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 76 LRSTYKPHTSSTD-PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+ ST K S+TD R++F+G ++ E L+Q F++ G V+ +R+V D TG K Y
Sbjct: 10 VTSTTKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKGY 69
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
GF EY+ + +AIR LN G + VD G
Sbjct: 70 GFCEYNDAQTAESAIRNLNGFELNGRPLRVDSAAG 104
>gi|16648909|gb|AAL24306.1| Unknown protein [Arabidopsis thaliana]
Length = 441
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL F+ +G V+S V+RDF TG S Y F+E++
Sbjct: 234 PEAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFEN 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+++C A ++ I VDF
Sbjct: 294 KESCEQAYFKMDNALIDDRRIHVDF 318
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+S D F+G L + + LEQAF++YG+V+ +++ D TG S+ +GF+ + EK+
Sbjct: 2 ASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKS 61
Query: 145 CLAAIRALNRQNFQGSEIIVD 165
AI +N QN G I V+
Sbjct: 62 MNDAIEGMNGQNLDGRNITVN 82
>gi|71027417|ref|XP_763352.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350305|gb|EAN31069.1| hypothetical protein, conserved [Theileria parva]
Length = 248
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P T P LF+ +LN + E DL+ F+ +G V S +++D+VTG S +Y F+E++
Sbjct: 44 PDADITPPKNVLFVCKLNPVTEEKDLKIIFSRFGNVKSCDIIKDYVTGDSLQYAFIEFET 103
Query: 142 EKACLAAIRALNRQNFQGSEIIVD 165
E++C A F+ +++D
Sbjct: 104 EESCNEAY-------FKMQNVLID 120
>gi|380018663|ref|XP_003693245.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Apis
florea]
Length = 613
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+I V+RD TG S +Y F+E+
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIVFSRFGKIIGCEVIRDRQTGDSLQYAFIEFAD 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
K+C A ++ I VDF WK + G + ++++ +
Sbjct: 291 RKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRWKGKGKGIQYFNDKDNNE 341
>gi|354474899|ref|XP_003499667.1| PREDICTED: cleavage stimulation factor subunit 2 [Cricetulus
griseus]
gi|344238061|gb|EGV94164.1| Cleavage stimulation factor 64 kDa subunit [Cricetulus griseus]
Length = 558
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++ +G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 16 RSVCVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 76 NLNGREFSGRALRVD 90
>gi|325281863|ref|YP_004254405.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
gi|324313672|gb|ADY34225.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM 20712]
Length = 104
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ +++ + DL F E+G V S +V+ D TG+SK +GF+E + E + AI AL
Sbjct: 3 IFVAKMSSATTGDDLATLFGEFGTVSSAKVIMDKETGNSKCFGFVEMEDETEGMNAINAL 62
Query: 153 NRQNFQGSEIIV 164
N FQG +I+V
Sbjct: 63 NESEFQGRKIVV 74
>gi|198435962|ref|XP_002131898.1| PREDICTED: similar to peptidylprolyl isomerase-like 4 [Ciona
intestinalis]
Length = 522
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + + DLE F+ +G +IS ++RD+ TG S +Y F+E++ C A
Sbjct: 238 PDNVLFVCKLNAVTTDEDLEIIFSRFGTIISCEIIRDYKTGDSLQYAFVEFETPDMCEKA 297
Query: 149 IRALNRQNFQGSEIIVDF 166
+ ++ I VDF
Sbjct: 298 YQKMDNVLIDDRRIHVDF 315
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF+++G V S +V+ + TG SK +GF+E + AI +
Sbjct: 5 LYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q+ G I+V+
Sbjct: 65 NGQSLGGRSIVVN 77
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
H D ++IG L + E DL AF+++G+V S ++ D +G SK +GF++ +
Sbjct: 2 HHVYQDLKMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSD 61
Query: 143 KACLAAIRALNRQNFQGSEIIVD 165
+A AAI A+N Q F+G I V+
Sbjct: 62 EAGRAAIEAMNEQEFKGRTIKVN 84
>gi|410905871|ref|XP_003966415.1| PREDICTED: uncharacterized protein LOC101066791 [Takifugu rubripes]
Length = 467
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 70 RAILRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
+ +L + PH D +TLF+ R+N ++ E+ L + F YG + + +V
Sbjct: 79 QTVLETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIYIVYSK 138
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
T + Y F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 139 RTAKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|301100496|ref|XP_002899338.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262104255|gb|EEY62307.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 414
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L++ F+E G V++ R+V D TG K YGF EY L+A+R
Sbjct: 13 RSVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCEYADGATALSAMR 72
Query: 151 ALNRQNFQGSEIIVDFECG 169
LN G + VDF G
Sbjct: 73 NLNGYEINGRNLRVDFADG 91
>gi|93140633|sp|P0C196.1|PPIL4_USTMA RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
Length = 551
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN +R DLE F+ +GK++S V++D TG S +Y F+E+D + A
Sbjct: 260 PENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERA 319
Query: 149 IRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
+ I VDF RL G W RN+G
Sbjct: 320 YFKMQNVLVDDRRIWVDF-------SQSVSRLHGDWVKKRNAG 355
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 82 PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE 138
PH D +TLF+ R+N ++ E+ L + F YG + + +V + +G + Y F+E
Sbjct: 91 PHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIE 150
Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 151 YEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 225 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 284
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 285 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 327
>gi|386812367|ref|ZP_10099592.1| RNA-binding protein [planctomycete KSU-1]
gi|386404637|dbj|GAB62473.1| RNA-binding protein [planctomycete KSU-1]
Length = 115
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G L + E DL QAF +GKV S V++D +G SK +GF+E + AAI L
Sbjct: 3 IYVGNLPHDVSEDDLRQAFEVFGKVTSATVIKDIFSGTSKGFGFVEMPAKAEAQAAINGL 62
Query: 153 NRQNFQGSEIIVD 165
N + +G I+V+
Sbjct: 63 NSKELKGKMIVVN 75
>gi|375012528|ref|YP_004989516.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
gi|359348452|gb|AEV32871.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
Length = 111
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+F+G L + E DL AF YG+V SVR++ D TG SK +GF+E + A AI
Sbjct: 2 NIFVGSLPWATEEEDLRGAFEAYGEVDSVRIITDKFTGRSKGFGFVEMPDDDAAQKAIDE 61
Query: 152 LNRQNFQGSEIIVD 165
LN F G +I+V+
Sbjct: 62 LNGSQFGGRDIVVN 75
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+QAF+++G V S +V+ + TG SK +GF+E + AI A+
Sbjct: 11 LYVGNLPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAISAM 70
Query: 153 NRQNFQGSEIIVD 165
N Q F G ++V+
Sbjct: 71 NGQQFGGRGLVVN 83
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 9 RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 69 NLNGREFSGRALRVD 83
>gi|22330231|ref|NP_175776.2| cyclophilin 59 [Arabidopsis thaliana]
gi|45680880|gb|AAS75309.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Arabidopsis thaliana]
gi|332194868|gb|AEE32989.1| cyclophilin 59 [Arabidopsis thaliana]
Length = 506
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL F+ +G V+S V+RDF TG S Y F+E++
Sbjct: 234 PEAEVKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFEN 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+++C A ++ I VDF
Sbjct: 294 KESCEQAYFKMDNALIDDRRIHVDF 318
>gi|367012397|ref|XP_003680699.1| hypothetical protein TDEL_0C05990 [Torulaspora delbrueckii]
gi|359748358|emb|CCE91488.1| hypothetical protein TDEL_0C05990 [Torulaspora delbrueckii]
Length = 337
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R LFI RLN +++ D+ F +G+V SV +VRD +G S YGF+E++ KAC +A +
Sbjct: 252 RVLFICRLNPSTKAKDIATIFHRFGEVHSVEIVRDKESGRSLCYGFIEFNDRKACESAYK 311
Query: 151 ALNRQNFQGSEIIVDF 166
+N I VDF
Sbjct: 312 NMNGVLIDDKRIKVDF 327
>gi|397635556|gb|EJK71910.1| hypothetical protein THAOC_06607 [Thalassiosira oceanica]
Length = 293
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F G L N+ E L AF+E GKV+ VR+V D TG + + F+E++ +A L+AIR +
Sbjct: 161 VFCGNLAFNTTEEQLYNAFSEIGKVVKVRMVVDQETGKMRGFSFIEFEDPQAALSAIRNM 220
Query: 153 NRQNFQGSEIIVDF 166
N G ++ V+F
Sbjct: 221 NDYEMNGRKLRVNF 234
>gi|156371745|ref|XP_001628922.1| predicted protein [Nematostella vectensis]
gi|156215911|gb|EDO36859.1| predicted protein [Nematostella vectensis]
Length = 245
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLFIGR+N ++ E+ L + YG + + +V + + Y F+EY+ E+ A
Sbjct: 100 DAFKTLFIGRINYDTSESKLRREMEMYGPIKHISMVYNSKASKPRGYAFIEYEHERDMHA 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGW 175
A + + + G I+VD E GR + W
Sbjct: 160 AYKHADGKKIDGRRIVVDVERGRTVKSW 187
>gi|332663699|ref|YP_004446487.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332332513|gb|AEE49614.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 208
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+F+ +LN + DL +AF +G+V S +V+ D TG S+ +GF+E + AAI A
Sbjct: 2 NIFVAKLNFGTSSEDLREAFEAFGEVDSAKVIMDHDTGKSRGFGFVEMPNDDEAQAAIDA 61
Query: 152 LNRQNFQGSEIIVDFECGRVLP 173
LN +F G+ I+ C + P
Sbjct: 62 LNETDFDGNTIV----CKKAEP 79
>gi|261330538|emb|CBH13522.1| U1 small nuclear ribonucleoprotein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 278
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 77 RSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
R+ Y +DP T+ + L+ + E D+ ++G+V+S R++ D GHS+RYGF
Sbjct: 107 RNPYTDLNICSDPRCTVVMSGLHAKTVEEDIRIFSEQFGRVVSTRLIFDR-NGHSRRYGF 165
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
+++ E A+ + ++ G +++D E GR P + P+R+
Sbjct: 166 VQFGREADVQRAVASSGKRRLHGRSVVIDVERGRQEPEFLPKRIA 210
>gi|195037156|ref|XP_001990030.1| GH18460 [Drosophila grimshawi]
gi|193894226|gb|EDV93092.1| GH18460 [Drosophila grimshawi]
Length = 582
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G V V+RD TG S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFED 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGG-GWGGNRNSGQLRFGGRNK 200
+K+C AA ++ I VDF W+ + G G G + LR G N
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVARVTWRGKGRGVIGADGKLDFNNLRDNGANN 350
Query: 201 PWVKPVQLMNERELGEWRK 219
K N+R E R+
Sbjct: 351 NGRKNESRTNKRGRNEGRR 369
>gi|72393025|ref|XP_847313.1| U1 small nuclear ribonucleoprotein [Trypanosoma brucei TREU927]
gi|62176488|gb|AAX70595.1| U1 small nuclear ribonucleoprotein, putative [Trypanosoma brucei]
gi|70803343|gb|AAZ13247.1| U1 small nuclear ribonucleoprotein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 278
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 77 RSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
R+ Y +DP T+ + L+ + E D+ ++G+V+S R++ D GHS+RYGF
Sbjct: 107 RNPYTDLNICSDPRCTVVMSGLHAKTVEEDIRIFSEQFGRVVSTRLIFDR-NGHSRRYGF 165
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
+++ E A+ + ++ G +++D E GR P + P+R+
Sbjct: 166 VQFGREADVQRAVASSGKRRLHGRSVVIDVERGRQEPEFLPKRIA 210
>gi|302662150|ref|XP_003022733.1| hypothetical protein TRV_03115 [Trichophyton verrucosum HKI 0517]
gi|291186695|gb|EFE42115.1| hypothetical protein TRV_03115 [Trichophyton verrucosum HKI 0517]
Length = 588
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G+++S V+RD TG S +Y F+E++
Sbjct: 381 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGRILSCEVIRDKKTGDSLQYAFIEFED 440
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW------KPRRLGGGWGGNRN 189
+K C A + I VDF ++ W K GGG+GG N
Sbjct: 441 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRTATNAKRSSQGGGFGGISN 496
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T +++G L + ++ LE FAE+G V S +V+ D TG SK +GF+E + AAI
Sbjct: 2 TTKIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAI 61
Query: 150 RALNRQNFQGSEIIVDF----ECGRVLPGWKPRRLGGGWGGNRN 189
L+ + G I+V+ E GR G+ P+ G+ G R+
Sbjct: 62 TGLHGMSVDGRSIVVNLARPREEGRSSGGYSPQ----GYAGKRS 101
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN + E L Q F +YG+V SV+++ D +G SK +GF+E E+A AAI AL
Sbjct: 5 IYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 153 NRQNFQGSEIIVD 165
N+ +G ++ V+
Sbjct: 65 NQHELEGRQLRVN 77
>gi|170574206|ref|XP_001892710.1| cleavage stimulation factor [Brugia malayi]
gi|158601568|gb|EDP38456.1| cleavage stimulation factor, putative [Brugia malayi]
Length = 334
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 75 ALRSTYKPHTSSTD-PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR 133
A+ T K S+TD R++F+G ++ E L+Q F++ G V+ +R+V D TG K
Sbjct: 9 AVTCTTKTAPSTTDRSARSVFVGNISYEVGEEQLKQVFSQVGAVVHLRLVHDRDTGKPKG 68
Query: 134 YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
YGF EY+ + +AIR LN G + VD G
Sbjct: 69 YGFCEYNDSQTAESAIRNLNGFELNGRPLRVDSAAG 104
>gi|378730823|gb|EHY57282.1| peptidylprolyl isomerase [Exophiala dermatitidis NIH/UT8656]
Length = 478
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTNDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K C A + I VDF
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDF 323
>gi|407941454|ref|YP_006857095.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899248|gb|AFU48457.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 125
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+ +
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGV 64
Query: 153 NRQNFQGSEIIVD 165
+ QN+ G +++V+
Sbjct: 65 HGQNYGGRDLVVN 77
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DLEQAF+++G V S +V+ + TG SK +GF+E + AI +
Sbjct: 5 LYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q+ G I+V+
Sbjct: 65 NGQSLGGRSIVVN 77
>gi|313886508|ref|ZP_07820224.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924054|gb|EFR34847.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 106
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S P TL++G L+ RE DLEQ +E+G+V + RVV D TG S+ +GF + E A
Sbjct: 16 SLFPFMTLYLGNLSYRVRENDLEQLLSEFGEVSNARVVMDRATGRSRGFGFADMADEDAR 75
Query: 146 LAAIRALNRQNFQGSEIIV 164
AI AL+ Q F+G +++
Sbjct: 76 -RAIEALSEQEFEGRRLLI 93
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G VIS R+V D TG K YGF EY ++ L+A+R
Sbjct: 18 RSVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGKPKGYGFCEYKDQETALSAMR 77
Query: 151 ALNRQNFQGSEIIVD 165
LN G ++ VD
Sbjct: 78 NLNGHELNGRQLRVD 92
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
PT TLF+G L+ N E ++ ++F++YG+++SVR D TG K +G++EY + A
Sbjct: 279 PTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKA 338
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
+ LN G + +D+ GR
Sbjct: 339 VEGLNGVEIAGRSLRLDYAGGR 360
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 79 TYKPHTSSTDPTR-TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
T KP T +P T+F+G L+ N E L FA+ G V S R++ D TG +K +G++
Sbjct: 172 TKKPKTE--EPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 138 EYDCEKACLAAIRALNRQNFQGSEIIVD 165
++ A AA+ AL G EI VD
Sbjct: 230 TFESADALTAAM-ALTGTELDGREIRVD 256
>gi|449444256|ref|XP_004139891.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Cucumis
sativus]
Length = 491
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + + DL F+ +G V+S V+RD+ TG S Y F+E++ ++AC A
Sbjct: 241 PDNVLFVCKLNPVTEDEDLHTIFSRFGTVLSAEVIRDYKTGDSLCYAFIEFETKEACEQA 300
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 301 YFKMDNALIDDRRIHVDF 318
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|328876749|gb|EGG25112.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Dictyostelium fasciculatum]
Length = 495
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN ++ DLE AF++ G V S +++D V+G S YGF+EY+
Sbjct: 231 PQANVKPPENVLFVCKLNPDTESEDLELAFSKCGVVKSCEIIKDPVSGESLCYGFIEYES 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ C A + + I VDF
Sbjct: 291 KEQCENAYKKMENTFIDERRIHVDF 315
>gi|383420989|gb|AFH33708.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LF+ L+ + E L AF +G+++ V+++ D ++ SK Y F+EY E+A AA+
Sbjct: 294 TKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAAL 353
Query: 150 RALNRQNFQGSEIIVDF 166
+A+N Q G I+VD
Sbjct: 354 KAMNGQIINGWMIVVDV 370
>gi|261189727|ref|XP_002621274.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591510|gb|EEQ74091.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239612961|gb|EEQ89948.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352134|gb|EGE80991.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 422
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR--------YGFLEY 139
D +TLF+ RL+ + EADLE+ F +G + +R+V D T + K+ Y F+ Y
Sbjct: 99 DAFKTLFVSRLSYDVTEADLEREFGRFGPIERIRIVVD--THNPKKNPKKPHRGYAFIVY 156
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ E+ AA + + + ++VD E GR + GWKPR
Sbjct: 157 EREQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPR 195
>gi|385808623|ref|YP_005845019.1| RRM domain-containing protein [Ignavibacterium album JCM 16511]
gi|383800671|gb|AFH47751.1| RRM domain protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L + +A+L+ F YGKV S +VV D T SK +GF+E++ E AAI AL
Sbjct: 5 LFVGSLPWSVNDAELKTLFEPYGKVASAKVVTDKQTRRSKGFGFVEFETEAEASAAINAL 64
Query: 153 NRQNFQGSEIIV 164
N +G IIV
Sbjct: 65 NGSEVKGRNIIV 76
>gi|308500055|ref|XP_003112213.1| CRE-SIG-7 protein [Caenorhabditis remanei]
gi|308268694|gb|EFP12647.1| CRE-SIG-7 protein [Caenorhabditis remanei]
Length = 452
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + + DLE F+ +GK+ + +VRD +G S +Y F+E+D EK+C A
Sbjct: 253 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQA 312
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 313 FFKMDNVLIDDRRIHVDF 330
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+++G L+ N ++ DL+ FA YG+V S ++V D T SK +GF+E ++ AAI A
Sbjct: 2 NIYVGNLSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEA 61
Query: 152 LNRQNFQGSEIIVD 165
LN G I+V+
Sbjct: 62 LNGTEVDGRNIVVN 75
>gi|449531281|ref|XP_004172615.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like, partial
[Cucumis sativus]
Length = 376
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL F+ +G V+S V+RD+ TG S Y F+E++
Sbjct: 234 PDAEIKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVLSAEVIRDYKTGDSLCYAFIEFET 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++AC A ++ I VDF
Sbjct: 294 KEACEQAYFKMDNALIDDRRIHVDF 318
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|383852950|ref|XP_003701988.1| PREDICTED: uncharacterized protein LOC100875854 [Megachile
rotundata]
Length = 416
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 85 SSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
SS P +T +F+GRL +N R +L Q F +G+V V+ RYGF+ E+
Sbjct: 3 SSNQPRKTKIFVGRLPENCRNDELRQLFLRFGEVTECDVM--------NRYGFVHMAREE 54
Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
AAI+AL+ NF+G+ I V+ G+ PRR
Sbjct: 55 DAAAAIKALHNSNFKGATINVEQSTGKSRGAGGPRR 90
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|170029308|ref|XP_001842535.1| peptidyl-prolyl cis-trans isomerase cyp6 [Culex quinquefasciatus]
gi|167881638|gb|EDS45021.1| peptidyl-prolyl cis-trans isomerase cyp6 [Culex quinquefasciatus]
Length = 655
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL+ F+ +GK++ V+RD V+G S +Y F+E++
Sbjct: 232 PDAEMAPPENVLFVCKLNPVTTDDDLQIIFSRFGKIVGCEVIRDKVSGDSLQYAFIEFED 291
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K+C A ++ I VDF
Sbjct: 292 KKSCEDAYFKMDNVLIDDRRIHVDF 316
>gi|149055933|gb|EDM07364.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_c [Rattus norvegicus]
gi|187469313|gb|AAI67051.1| Snrp70 protein [Rattus norvegicus]
Length = 451
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
gi|83305641|sp|Q62376.2|RU17_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|74144840|dbj|BAE27392.1| unnamed protein product [Mus musculus]
gi|74221620|dbj|BAE21515.1| unnamed protein product [Mus musculus]
gi|124297316|gb|AAI32021.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|124298068|gb|AAI31995.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|148690898|gb|EDL22845.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
gi|148690901|gb|EDL22848.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
Length = 448
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|354493110|ref|XP_003508687.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Cricetulus griseus]
gi|344247885|gb|EGW03989.1| U1 small nuclear ribonucleoprotein 70 kDa [Cricetulus griseus]
Length = 445
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|302420239|ref|XP_003007950.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium albo-atrum
VaMs.102]
gi|261353601|gb|EEY16029.1| peptidyl-prolyl cis-trans isomerase cyp6 [Verticillium albo-atrum
VaMs.102]
Length = 497
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +G ++S V+RD TG S +Y F+EY
Sbjct: 242 PFAEVAPPENILFVCKLNPVTTDGDLELIFGRFGTILSCEVIRDKKTGDSLQYAFIEYGD 301
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW-----KPRRLG---GGWGG 186
+ +C AA + I VDF ++ W K R+ GGWGG
Sbjct: 302 KASCEAAYFKMQDVLIDDRRIHVDFSQSVSKLSDVWRNDTNKKRKKNASRGGWGG 356
>gi|297277576|ref|XP_002801385.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Macaca mulatta]
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen [Homo sapiens]
gi|119572835|gb|EAW52450.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_e [Homo sapiens]
gi|380815838|gb|AFE79793.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384948960|gb|AFI38085.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+P+ LF+ LNK + L + FA++G+V+ RVV D V+G+SK +GF++Y +
Sbjct: 41 EPSTNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASK 100
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
I+ ++ + G I ++ PG +P
Sbjct: 101 GIQGMDGKFLDGWVIFAEYAKSSPAPGQQP 130
>gi|34540433|ref|NP_904912.1| RNA-binding protein [Porphyromonas gingivalis W83]
gi|188994532|ref|YP_001928784.1| RNA-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|334147542|ref|YP_004510471.1| RNA-binding protein [Porphyromonas gingivalis TDC60]
gi|419970956|ref|ZP_14486425.1| hypothetical protein HMPREF1322_0287 [Porphyromonas gingivalis W50]
gi|34396746|gb|AAQ65811.1| RNA-binding protein [Porphyromonas gingivalis W83]
gi|188594212|dbj|BAG33187.1| RNA-binding protein [Porphyromonas gingivalis ATCC 33277]
gi|333804698|dbj|BAK25905.1| RNA-binding protein [Porphyromonas gingivalis TDC60]
gi|392609600|gb|EIW92405.1| hypothetical protein HMPREF1322_0287 [Porphyromonas gingivalis W50]
Length = 97
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN RE DL +YG V S RV+ D TG S+ +GF+E + E AI L
Sbjct: 5 IYVGNLNYRVREEDLTGLLQQYGAVTSARVITDRETGRSRGFGFVEMEDENDARRAIEEL 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRR 179
Q FQG ++IV R P PRR
Sbjct: 65 FDQEFQGRKLIVKEALER--PERAPRR 89
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P +P LF+ L+K + L++AF+++G+V+ +VV D +G+SK +GF+ Y
Sbjct: 45 PAREQAEPNTNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGT 104
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
+ I+ ++ Q G I ++ + P +G G+G
Sbjct: 105 LEDAAEGIKGMDGQFLDGWVIFAEYARPKQPPSQPQNNMGPGYG 148
>gi|431920778|gb|ELK18551.1| U1 small nuclear ribonucleoprotein 70 kDa [Pteropus alecto]
Length = 423
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L+IG+L+ N+ E DLE F +YG V+ V +++D T + + F+E+D E+ AAI
Sbjct: 7 LYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDGC 66
Query: 153 NRQNFQGSEIIV 164
N Q+ G +I V
Sbjct: 67 NGQDVNGRQITV 78
>gi|71403070|ref|XP_804375.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70867311|gb|EAN82524.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 497
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + L F++YG+V+S VVRD TG+S YGF+E++ +AC A
Sbjct: 397 PENVLFVCKLNPLTTGEGLRMCFSQYGRVVSTDVVRDHKTGNSLCYGFVEFEEVEACYRA 456
Query: 149 IRALNRQNFQGSEIIVDF 166
+ +++ I VDF
Sbjct: 457 FKKMDQALVDDHRIHVDF 474
>gi|347819855|ref|ZP_08873289.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 128
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAIR +
Sbjct: 23 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIRGV 82
Query: 153 NRQNFQGSEIIVD 165
+ Q+F G +++V+
Sbjct: 83 HGQSFGGRDLVVN 95
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LF+ L+ + E L AF +G+++ V+++ D ++ SK Y F+EY E+A AA+
Sbjct: 298 TKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAAL 357
Query: 150 RALNRQNFQGSEIIVDF 166
+A+N Q G I+VD
Sbjct: 358 KAMNGQIINGWMIVVDV 374
>gi|321479154|gb|EFX90110.1| hypothetical protein DAPPUDRAFT_299933 [Daphnia pulex]
Length = 381
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S ++V D TG K YGF EY ++ L A+R
Sbjct: 14 RSVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFCEYRDQETALCAMR 73
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 74 NLNGYEIAGRTLRVDNAC 91
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LF+ L+ + E L AF +G+++ V+++ D ++ SK Y F+EY E+A AA+
Sbjct: 300 TKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAAL 359
Query: 150 RALNRQNFQGSEIIVDF 166
+A+N Q G I+VD
Sbjct: 360 KAMNGQIINGWMIVVDV 376
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
T+F+G LN + E L + F EYG+V+S +VV + TG SK +GF+++D + AI+
Sbjct: 36 TIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIKQ 95
Query: 152 LNRQNFQGSEIIVDF 166
+ Q G I +F
Sbjct: 96 ADGQTMDGRTIKCNF 110
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F
Sbjct: 89 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 148
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|443694236|gb|ELT95429.1| hypothetical protein CAPTEDRAFT_160825 [Capitella teleta]
Length = 548
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 78 STYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
S P S R++F+G + + E L++ F + G VIS R+V D TG K YGF
Sbjct: 11 SNTSPSASEERAQRSVFVGNIPYEASEEQLKEVFQQAGPVISFRLVYDRETGKPKGYGFC 70
Query: 138 EYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
EY + +A+R LN ++ G + V G
Sbjct: 71 EYQDVETAQSAMRNLNNYDYNGRPLRVGVAAG 102
>gi|299472383|emb|CBN77571.1| similar to CG7697-PA [Ectocarpus siliculosus]
Length = 1264
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G + + E L + F+E G ++S+R+V DF TG K + F+EY+ L+AIR L
Sbjct: 11 VFVGNIPFGTTEEQLHEIFSEAGGIVSIRLVLDFETGKPKGFAFVEYEDAATALSAIRNL 70
Query: 153 NRQNFQGSEIIVDF 166
N + G + V+F
Sbjct: 71 NGYDCNGRLLRVNF 84
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L+ N+ + L Q F E+G V VV+D TG S+ +GF+ + ++ AA+ A+
Sbjct: 4 LFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMNAM 63
Query: 153 NRQNFQGSEIIVD 165
N Q F G +I VD
Sbjct: 64 NNQEFDGRQIRVD 76
>gi|193598819|ref|XP_001951232.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Acyrthosiphon pisum]
gi|328706164|ref|XP_003243012.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Acyrthosiphon pisum]
Length = 386
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G VIS ++V D TG K YGF EY ++ L+A+R
Sbjct: 12 RSVFVGNIPYEATEEKLKDIFSEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMR 71
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 72 NLNGYEIGGRTLRVDNAC 89
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|426244049|ref|XP_004015848.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Ovis aries]
Length = 340
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LF+ L+ + E L AF +G+++ V+++ D ++ SK Y F+EY E+A AA+
Sbjct: 264 TKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAAL 323
Query: 150 RALNRQNFQGSEIIVD 165
+A+N Q G I+VD
Sbjct: 324 KAMNGQIINGWMIVVD 339
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|302340505|ref|YP_003805711.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301637690|gb|ADK83117.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 88
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ +++G LN ++RE L+ F +YG+V SV ++ D TG SK +GF+E + A AAI
Sbjct: 3 KKIYVGNLNYSTREESLQDLFGQYGQVNSVNIITDRYTGQSKGFGFVEMEEMDAAEAAIS 62
Query: 151 ALNRQNFQGSEIIVD 165
AL+ + G E+ V+
Sbjct: 63 ALDGTSLDGRELRVN 77
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P +P LF+ L+K + L++AF+++G+V+ RVV D V+G+SK +GF++Y
Sbjct: 46 PAREQAEPNTNLFVSGLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYAT 105
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLP 173
+ I+ ++ Q G I ++ R P
Sbjct: 106 LEDAAEGIKGMDGQFLDGWVIFAEYARPRQPP 137
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F
Sbjct: 121 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAF 180
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 181 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 222
>gi|219111803|ref|XP_002177653.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410538|gb|EEC50467.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 76
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G L N+ E L+Q F++ G+VI VR+V D TG + + F+E+ +A L+AIR +
Sbjct: 1 VFVGNLAFNTTEEQLQQVFSDIGRVIHVRLVTDVDTGKPRGFAFVEFSDAQAALSAIRNM 60
Query: 153 NRQNFQGSEIIVDF 166
N G I V+F
Sbjct: 61 NDYELNGRRIRVNF 74
>gi|119572837|gb|EAW52452.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_g [Homo sapiens]
Length = 395
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+EY+ E+ +
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G ++VD E GR + GW+PR
Sbjct: 160 AYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|255954949|ref|XP_002568227.1| Pc21g11960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589938|emb|CAP96093.1| Pc21g11960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 444
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFADVKPPENILFVCKLNPVTQDEDLNLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFEE 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLGGGWGG 186
+K C A + I VDF ++ W+ RR GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNSTVTKRRQRGGFGG 350
>gi|89902981|ref|YP_525452.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
gi|89347718|gb|ABD71921.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
Length = 140
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DL+QAFA +G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYTFRDEDLQQAFAAHGTVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q + G ++V+
Sbjct: 65 NGQQYGGRGLVVN 77
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S DP FIG L + + L AF +YG ++ +VV D +G S+ +GF+ +D +KA
Sbjct: 2 SEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAM 61
Query: 146 LAAIRALNRQNFQGSEIIVD 165
AI A+N + G I VD
Sbjct: 62 DEAIAAMNGMDLDGRTITVD 81
>gi|388854907|emb|CCF51410.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Ustilago hordei]
Length = 557
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN +R DLE F+ +GK++S V++D TG S +Y F+E+D + A
Sbjct: 261 PENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERA 320
Query: 149 IRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLGG--------GWGGN--RNSGQ 192
+ I VDF R+ W +R GG WGG R+ GQ
Sbjct: 321 YFKMQNVLVDDRRIWVDFSQSVSRLHGDWVRKRNGGREAPKGHYKWGGEGRRDDGQ 376
>gi|158259701|dbj|BAF85809.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 80 YKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
+ PH D +TLF+ R+N ++ E+ L + F YG + + V +G + Y F
Sbjct: 89 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHTVYSKRSGKPRGYAF 148
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 149 IEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|225440312|ref|XP_002263021.1| PREDICTED: glycine-rich RNA-binding protein blt801 [Vitis vinifera]
gi|297740398|emb|CBI30580.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFI LNK + L + +++G+V+ RVV D +G+SK +GF++Y
Sbjct: 33 PSTTLFISGLNKRTTSEKLNEEASKFGEVVHARVVTDRSSGYSKGFGFVKYATIAQAEQG 92
Query: 149 IRALNRQNFQGSEIIVDFECGRVLPGW 175
I+ L+ Q G I +F R PG+
Sbjct: 93 IKGLDAQFLDGWVIFAEFARSRTPPGY 119
>gi|449709532|gb|EMD48780.1| peptidyl prolyl cistrans isomerase, putative [Entamoeba histolytica
KU27]
Length = 351
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LFI ++N + E DLE+ F +YGK+ SV ++RD + S YGF+E++
Sbjct: 219 PFAEIKPPENVLFICKMNPITNEEDLEEIFRKYGKIRSVEIIRDRKSKKSLGYGFIEFET 278
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ C A + ++ I VDF
Sbjct: 279 KEGCENAYQKMDNVIIDERRIHVDF 303
>gi|115385336|ref|XP_001209215.1| hypothetical protein ATEG_01850 [Aspergillus terreus NIH2624]
gi|114196907|gb|EAU38607.1| hypothetical protein ATEG_01850 [Aspergillus terreus NIH2624]
Length = 545
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +GK++S V+RD TG S +Y F+E++
Sbjct: 327 PFAEVKPPENVLFVCKLNPVTQDDDLHLIFSRFGKILSCEVIRDKRTGDSLQYAFIEFEN 386
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
+K C A + I VDF ++ W+ +R G GG+GG
Sbjct: 387 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRNATISKRSGQRGGFGG 439
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 78 STYKPHTSSTD------------PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
ST KPH S ++ P+ TLFIG L+ N+ L F EYG VIS R+
Sbjct: 291 STGKPHASKSNDRAKQFGDSQSPPSDTLFIGNLSFNANRDGLFNTFGEYGNVISCRIPTH 350
Query: 126 FVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
T K +G++++ AA+ ALN Q +G +DF R
Sbjct: 351 PDTQQPKGFGYVQFSSVDEAKAALEALNGQYIEGRPCRLDFSAPR 395
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLF+GRL+ N + L++ F G VI RV+ + TG S+ YG+++++ + A+
Sbjct: 216 TLFVGRLSWNIDDDWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFEGKSFAEKALAE 275
Query: 152 LNRQNFQGSEIIVDFECGR 170
+ + G I +D G+
Sbjct: 276 MQGKEIDGRPINLDMSTGK 294
>gi|328791237|ref|XP_001121334.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Apis
mellifera]
Length = 507
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+I V+RD TG S +Y F+E+
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIVFSRFGKIIGCEVIRDRQTGDSLQYAFIEFAD 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
K+C A ++ I VDF WK
Sbjct: 291 RKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRWK 325
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL +AF+++G V S +V+ D TG SK +GF+E + AAI L
Sbjct: 5 LYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAINGL 64
Query: 153 NRQNFQGSEIIVD 165
N Q G I+V+
Sbjct: 65 NGQAIGGRAIVVN 77
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L+ + E L +AF +YG + V V+RD TG S+ +GF++Y+ + A+ A+
Sbjct: 7 LFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAM 66
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPR 178
N ++ G I VD E G+ G +PR
Sbjct: 67 NGKSLDGRAIRVD-EAGK---GLRPR 88
>gi|350407880|ref|XP_003488226.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Bombus
impatiens]
Length = 502
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+I V+RD TG S +Y F+E+
Sbjct: 231 PDAEMAPPENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDRQTGDSLQYAFIEFAD 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
K+C A ++ I VDF WK
Sbjct: 291 RKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRWK 325
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLF+G L+ + +++ FAEYG + V + D TG K +G++++ ++ AA
Sbjct: 335 PSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAA 394
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
+ ALN Q+ G I +D+ R
Sbjct: 395 LDALNGQDIAGRNIRIDYAAPR 416
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ LF+G L+ N E L + F +G+++ R++ D TG K +G++E+ A
Sbjct: 234 KNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQA 293
Query: 151 ALNRQNFQGSEIIVDFECGRVLP 173
+++ G + VDF R P
Sbjct: 294 EMHQYELDGRPLNVDFSTPRQKP 316
>gi|431930897|ref|YP_007243943.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
gi|431829200|gb|AGA90313.1| RRM domain-containing RNA-binding protein [Thioflavicoccus mobilis
8321]
Length = 90
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G L N ++ADL + F+ +G+V V V+ D +TG SK +GF+E AAI+ L
Sbjct: 3 IYVGNLPYNVKDADLRETFSRFGEVSQVTVIMDRLTGESKGFGFVEMSSNSQADAAIKGL 62
Query: 153 NRQNFQGSEIIVD 165
N + G I V+
Sbjct: 63 NGTDLNGRNITVN 75
>gi|393216149|gb|EJD01640.1| cyclophilin-like protein [Fomitiporia mediterranea MF3/22]
Length = 442
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +G ++S +V+RD +TG S +Y F+E+D
Sbjct: 237 PFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKLTGDSLQYAFIEFDK 296
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGR 198
+ A + I VDF ++ W G GG RN + F GR
Sbjct: 297 REDAEQAYFKMQNVLIDDRRIWVDFSQSVAKLNTHWSNDVKVGPRGG-RNRNRDGFAGR 354
>gi|91089021|ref|XP_968771.1| PREDICTED: similar to CG5808 CG5808-PA [Tribolium castaneum]
gi|270011537|gb|EFA07985.1| hypothetical protein TcasGA2_TC005570 [Tribolium castaneum]
Length = 467
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+ S V+RD TG S +Y F+E++
Sbjct: 231 PDAEMAPPENVLFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKTGDSLQYAFVEFED 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQ 192
+K+C A ++ I VDF W LG G G RN G+
Sbjct: 291 KKSCEDAYFKMDNVLIDDRRIHVDFSQSVSKVRW----LGKGRGV-RNLGE 336
>gi|229495244|ref|ZP_04388979.1| RNA-binding protein [Porphyromonas endodontalis ATCC 35406]
gi|229317687|gb|EEN83585.1| RNA-binding protein [Porphyromonas endodontalis ATCC 35406]
Length = 86
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN + DL +YG V + R++ D TG S+ +GF+E D E+A L AI AL
Sbjct: 3 IYLGNLNFKVKAEDLTALVQQYGSVANARIITDRETGRSRGFGFVEMDDEEA-LVAIEAL 61
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRR 179
N Q F G +++V R P PRR
Sbjct: 62 NEQEFMGRKLVVKQAEER--PERAPRR 86
>gi|222112646|ref|YP_002554910.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732090|gb|ACM34910.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 121
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQ F+++G V S +V+ + TG SK +GF+E + AAI+
Sbjct: 5 LYVGNLPYTFRDQDLEQTFSQFGAVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGA 64
Query: 153 NRQNFQGSEIIVD 165
+ QN+ G +++V+
Sbjct: 65 HGQNYGGRDLVVN 77
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L+ ++ E L +AFA+YG + V V+RD TG S+ +GF++YD + A+ +
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGM 66
Query: 153 NRQNFQGSEIIVD 165
N ++ G I VD
Sbjct: 67 NGKSVDGRTIRVD 79
>gi|121709164|ref|XP_001272328.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119400477|gb|EAW10902.1| RNA binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 462
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL+ F+ +G+++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLQLIFSRFGQILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
+K C A + I VDF ++ W+ +R G GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSGQRGGFGG 351
>gi|242011908|ref|XP_002426685.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510856|gb|EEB13947.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 605
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL F+ +G V S V+RD +TG S +Y F+E++
Sbjct: 230 PDADIAPPENVLFVCKLNPVTSDHDLSLIFSRFGTVKSCEVIRDQITGDSLQYAFIEFEN 289
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
KAC A ++ I VDF WK
Sbjct: 290 RKACEEAYFKMDNVLIDDRRIHVDFSQSVAKLRWK 324
>gi|145552619|ref|XP_001461985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429822|emb|CAK94612.1| unnamed protein product [Paramecium tetraurelia]
Length = 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FI LN E D+ F++YG+++ V +VRD +TG SK + FL Y+ +++ + A+
Sbjct: 31 IFIANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGKSKGFCFLAYEDQRSTILAV--- 87
Query: 153 NRQNFQGSEIIVDFECGRVL 172
NF +EI CGR+L
Sbjct: 88 --DNFNHAEI-----CGRLL 100
>gi|365091633|ref|ZP_09328988.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415944|gb|EHL23068.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 129
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+ +
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGV 64
Query: 153 NRQNFQGSEIIVD 165
+ NF G +++V+
Sbjct: 65 HGTNFGGRDLVVN 77
>gi|355756025|gb|EHH59772.1| hypothetical protein EGM_09962 [Macaca fascicularis]
Length = 255
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 82 PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE 138
PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+E
Sbjct: 91 PHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
Y+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 151 YEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|351731831|ref|ZP_08949522.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 131
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q F++YG V S +V+ + TG SK +GF+E + AAI+ +
Sbjct: 5 LYVGNLPYSFRDEDLQQTFSQYGSVGSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGV 64
Query: 153 NRQNFQGSEIIVD 165
+ NF G +++V+
Sbjct: 65 HGTNFGGRDLVVN 77
>gi|393785537|ref|ZP_10373687.1| hypothetical protein HMPREF1071_04555 [Bacteroides salyersiae
CL02T12C01]
gi|392662292|gb|EIY55856.1| hypothetical protein HMPREF1071_04555 [Bacteroides salyersiae
CL02T12C01]
Length = 81
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN +EADL+Q +YG V SV+V+ D TG SK + F+E + + A AI L
Sbjct: 3 IYVGNLNYRVKEADLQQVMEDYGTVSSVKVIMDRETGRSKGFAFIEMEDDAAASKAIAEL 62
Query: 153 NRQNFQGSEIIV 164
N + G ++V
Sbjct: 63 NGAEYHGRTMVV 74
>gi|351703349|gb|EHB06268.1| U1 small nuclear ribonucleoprotein 70 kDa [Heterocephalus glaber]
Length = 431
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 79 TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
+ PH D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y
Sbjct: 88 MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
F+EY+ E+ +A + + + G ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|170054071|ref|XP_001862961.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
gi|167874431|gb|EDS37814.1| cleavage stimulation factor 64 kDa subunit [Culex quinquefasciatus]
Length = 400
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G VIS+++V D +G K YGF EY ++ L+A+R
Sbjct: 15 RSVFVGNIPYEATEEKLKDIFSEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMR 74
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 75 NLNGYEIGGRALRVDNAC 92
>gi|118488424|gb|ABK96027.1| unknown [Populus trichocarpa]
Length = 313
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 122 VVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLG 181
+V D V+ + Y F+EY + AA + + + G ++VD E GR +P W+PRRLG
Sbjct: 1 MVADKVSNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 60
Query: 182 GGWGGNRNSGQ 192
GG G R G+
Sbjct: 61 GGLGTTRVGGE 71
>gi|31201653|ref|XP_309774.1| AGAP010918-PA [Anopheles gambiae str. PEST]
gi|21293399|gb|EAA05544.1| AGAP010918-PA [Anopheles gambiae str. PEST]
Length = 393
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
R++F+G + + E L+ F E G V+S+++V D +G K YGF EY ++ L+A+
Sbjct: 13 MRSVFVGNIPYEATEEKLKDIFCEVGPVLSLKLVFDRESGKPKGYGFCEYKDQETALSAM 72
Query: 150 RALNRQNFQGSEIIVDFEC 168
R LN F G + VD C
Sbjct: 73 RNLNGYEFGGRALRVDNAC 91
>gi|393228064|gb|EJD35721.1| cyclophilin-like protein [Auricularia delicata TFB-10046 SS5]
Length = 427
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +G+++S +V+RD TG S +Y F+E+D
Sbjct: 234 PFANVRPPENVLFVCKLNPATRDEDLELIFSRFGRIMSCQVIRDKKTGDSLQYAFIEFDQ 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGW--KPRR 179
A + I VDF R GW P+R
Sbjct: 294 RADAEQAYFKMQNVLIDDKRIWVDFSQSVARTNTGWSNNPKR 335
>gi|298492825|ref|YP_003723002.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234743|gb|ADI65879.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 101
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
++++G L+ E DL+QAFAEYGKV V++ D TG + + F+E + E AAI A
Sbjct: 2 SIYVGNLSYQVTEDDLKQAFAEYGKVSRVQLPTDRETGRLRGFAFVEMETEDQETAAIEA 61
Query: 152 LNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
L+ + G ++ V+ R P PR G WGG+ R+
Sbjct: 62 LDGAEWMGRDLKVNKAKPRE-PRTSPR---GNWGGSAGRSDRRY 101
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S DP FIG L + + L AF +YG ++ +VV D +G S+ +GF+ +D +KA
Sbjct: 2 SEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAM 61
Query: 146 LAAIRALNRQNFQGSEIIVD 165
AI A+N + G I VD
Sbjct: 62 DEAIAAMNGMDLDGRTITVD 81
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ +A L Q F E+G+V VV+D TG S+ +GF+ + E AAI+A+
Sbjct: 4 LFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 64 NNVEFDGRTIRVD 76
>gi|383847372|ref|XP_003699328.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Megachile rotundata]
Length = 507
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+I V+RD TG S +Y F+E+
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDKQTGDSLQYAFIEFAE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
K+C A ++ I VDF WK
Sbjct: 291 RKSCEEAFFKMDNVLIDDRRIHVDFSQSVAKMRWK 325
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S DP FIG L ++ + L AF +YG ++ +VV D +G S+ +GF+ +D +KA
Sbjct: 2 SEDPEYRCFIGGLAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAM 61
Query: 146 LAAIRALNRQNFQGSEIIVD 165
AI A+N + G I VD
Sbjct: 62 DEAIAAMNGMDLDGRTITVD 81
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG LN + E LE F +YG+++ + +++D T S+ + F+ ++ R +
Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69
Query: 153 NRQNFQGSEIIVD------FECGRVLP-GWKPRRLGGGWGGNR 188
N ++ G I V+ FE GR P PR L GG GG R
Sbjct: 70 NGKSLDGKAIKVEQATKPSFESGRRGPLRGPPRGLRGGSGGTR 112
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L+ N+ LEQ FA++G+V S ++V D TG SK +GF+E ++ AAI AL
Sbjct: 5 LYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAISAL 64
Query: 153 NRQNFQGSEIIVD 165
N Q G + V+
Sbjct: 65 NGQEVDGRALTVN 77
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L+ N+ + L Q F E+G V VV+D TG S+ +GF+ + + AA+ A+
Sbjct: 4 LFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMNAM 63
Query: 153 NRQNFQGSEIIVD 165
N Q F G +I VD
Sbjct: 64 NNQEFDGRQIRVD 76
>gi|393789438|ref|ZP_10377559.1| hypothetical protein HMPREF1068_03839 [Bacteroides nordii
CL02T12C05]
gi|392650886|gb|EIY44552.1| hypothetical protein HMPREF1068_03839 [Bacteroides nordii
CL02T12C05]
Length = 81
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+++G LN +EADL+Q +YG V SV+V+ D TG SK + F+E + + A AI L
Sbjct: 3 IYVGNLNYRVKEADLQQVMEDYGTVSSVKVIMDRETGRSKGFAFIEMEDDTAASKAIAEL 62
Query: 153 NRQNFQGSEIIV 164
N + G ++V
Sbjct: 63 NGAEYHGRTMVV 74
>gi|400602889|gb|EJP70487.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 181
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ EA L Q F E+G V VV+D TG S+ +GF+ Y+ E +AI A+
Sbjct: 4 LFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYNQEADAQSAIAAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 64 NNVEFDGRTIRVD 76
>gi|328794028|ref|XP_003251965.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like, partial
[Apis mellifera]
Length = 330
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+I V+RD TG S +Y F+E+
Sbjct: 167 PDADMAPPENVLFVCKLNPVTTDDDLEIVFSRFGKIIGCEVIRDRQTGDSLQYAFIEFAD 226
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
K+C A ++ I VDF WK
Sbjct: 227 RKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRWK 261
>gi|389586200|dbj|GAB68929.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1039
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + E DL+ FA +G +IS +V+D VT +S +Y F+E++ ++ CL A
Sbjct: 227 PENVLFVCKLNPVTEEEDLKTIFARFGPIISCNIVKDKVTNNSLQYAFIEFEKKEDCLNA 286
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 287 YFEMDNVIIDDRRIHVDF 304
>gi|350401751|ref|XP_003486249.1| PREDICTED: cleavage stimulation factor subunit 2-like [Bombus
impatiens]
Length = 441
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
PT+TLF+ L++++ + L++AF ++ R+V D TG SK +GF+++D E C AA
Sbjct: 471 PTKTLFVKGLSEDTTDQSLKEAFE---AAVAARIVTDKETGSSKGFGFVDFDNEADCKAA 527
Query: 149 IRALNRQNFQGSEIIVDF 166
A++ GS++ +D+
Sbjct: 528 KEAMDDGEIDGSKVTLDY 545
>gi|410921714|ref|XP_003974328.1| PREDICTED: nucleolin-like isoform 2 [Takifugu rubripes]
Length = 672
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
PT+TLF+ L++++ + L++AF ++ R+V D TG SK +GF+++D E C AA
Sbjct: 509 PTKTLFVKGLSEDTTDHSLKEAF---DGAVAARIVTDKDTGSSKGFGFVDFDNEADCKAA 565
Query: 149 IRALNRQNFQGSEIIVDF 166
A++ GS++ +D+
Sbjct: 566 KEAMDDGEIDGSKVTLDY 583
>gi|70928329|ref|XP_736391.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56510887|emb|CAH79938.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 267
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P+ P LF+ +LN + E DL+ F +G +IS +V+D VT +S +Y F+E++
Sbjct: 68 PNADLKPPENILFVCKLNPITEEDDLKTIFLRFGPIISCNIVKDKVTNNSLQYAFIEFEK 127
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
++ CL A ++ I VDF
Sbjct: 128 KEDCLNAYFEMDNVVIDDRRIHVDF 152
>gi|444324112|ref|XP_004182696.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
gi|387515744|emb|CCH63177.1| hypothetical protein TBLA_0J01830 [Tetrapisispora blattae CBS 6284]
Length = 140
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FIG LNKN E D+ F+++G I ++++R+ T HS + +L+Y+ ++C+ AI L
Sbjct: 36 IFIGNLNKNLTEGDILTVFSQFGNPIDLKLIRNKQTNHSMGFAYLKYEDSRSCILAIDNL 95
Query: 153 NRQNFQGSEIIVD 165
N G+ + +D
Sbjct: 96 NGSKVAGNTLKID 108
>gi|361127992|gb|EHK99944.1| putative Peptidyl-prolyl cis-trans isomerase-like 4 [Glarea
lozoyensis 74030]
Length = 375
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++S V+RD TG S +Y F+EY+
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDKRTGDSLQYSFIEYED 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+ +C A + I VDF
Sbjct: 299 QASCEQAYFKMQGVLIDDHRIHVDF 323
>gi|343961429|dbj|BAK62304.1| U1 small nuclear ribonucleoprotein 70 kDa [Pan troglodytes]
Length = 251
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+EY+ E+ +
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G ++VD E GR + GW+PR
Sbjct: 160 AYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|443707253|gb|ELU02931.1| hypothetical protein CAPTEDRAFT_154976 [Capitella teleta]
Length = 417
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L+I L +N+ + DLE +YGK+IS + + D T K YGF+++D +A A+RAL
Sbjct: 112 LYIRGLTQNTTDKDLENLCKQYGKIISTKAIIDQTTNKCKGYGFVDFDSLQAAEIAVRAL 171
Query: 153 NRQNFQGSEI---IVDFEC 168
+Q Q IV C
Sbjct: 172 QQQGVQAQMAKVSIVPLLC 190
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DPT L+I L E +LE+ F+ +G+VIS R++RD GHS+ GF + + C
Sbjct: 209 DPTN-LYIANLPVYMTETNLEEMFSPFGQVISTRILRDN-QGHSRGVGFARMESKDKCEQ 266
Query: 148 AIRALNRQNFQG 159
I+ N Q G
Sbjct: 267 IIQTFNGQKIPG 278
>gi|332026262|gb|EGI66401.1| Cleavage stimulation factor 64 kDa subunit [Acromyrmex echinatior]
Length = 480
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 78 STYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
ST T R++F+G + + E +L+ F+E G V+S ++V D TG K YGF
Sbjct: 4 STISDQTLMDKSMRSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFC 63
Query: 138 EYDCEKACLAAIRALNRQNFQGSEIIVDFEC 168
EY ++ L+A+R LN G + VD C
Sbjct: 64 EYKDQETALSAMRNLNGYEIGGRTLRVDNAC 94
>gi|156545479|ref|XP_001606947.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Nasonia
vitripennis]
Length = 501
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++ V+RD TG S +Y F+E+
Sbjct: 231 PDAEMAPPENVLFVCKLNPVTSDDDLEVIFSRFGKIVGCEVIRDRQTGDSLQYAFIEFAE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF--GGRN 199
K+C A ++ I VDF W+ + G + N + + G N
Sbjct: 291 RKSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRWRGKGKGIKYFDEENKEEKKANNAGNN 350
Query: 200 KP 201
+P
Sbjct: 351 RP 352
>gi|74140671|dbj|BAB29263.3| unnamed protein product [Mus musculus]
gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Length = 248
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+EY+ E+ +
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G ++VD E GR + GW+PR
Sbjct: 160 AYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|425773075|gb|EKV11448.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Penicillium digitatum
Pd1]
gi|425778830|gb|EKV16935.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Penicillium digitatum
PHI26]
Length = 428
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFADVKPPENILFVCKLNPVTQDEDLNLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFEE 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLGGGWGG 186
+K C A + I VDF ++ W+ RR GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNSTVTKRRERGGFGG 350
>gi|389632187|ref|XP_003713746.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
gi|351646079|gb|EHA53939.1| hypothetical protein MGG_04816 [Magnaporthe oryzae 70-15]
Length = 236
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 39/73 (53%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ E L Q F EYG V VV+D TG S+ +GF+ Y E AI A+
Sbjct: 59 LFIGGLAWHTEEGTLRQKFEEYGVVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQKAITAM 118
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 119 NNVEFDGRTIRVD 131
>gi|307172466|gb|EFN63915.1| Cleavage stimulation factor 64 kDa subunit [Camponotus floridanus]
Length = 438
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|417412278|gb|JAA52529.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15, partial [Desmodus rotundus]
Length = 678
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R
Sbjct: 50 RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 109
Query: 151 ALNRQNFQGSEIIVD 165
LN + F G + VD
Sbjct: 110 NLNGREFSGRALRVD 124
>gi|390595574|gb|EIN04979.1| hypothetical protein PUNSTDRAFT_55288 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 170
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 73 LRALRSTYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTG 129
+A + +YKP DP +TLFI RL+K++ E+DL + F YG + VR+VRD G
Sbjct: 94 FKAAKESYKPQEDPEAVGDPYKTLFIARLHKSATESDLRREFESYGTIERVRIVRD-KNG 152
Query: 130 HSKRYGFLEYDCEK 143
S+ Y F+ Y+ E+
Sbjct: 153 RSRGYAFIVYERER 166
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R++D+EQAF+++G V S +V+ + TG SK +GF+E AAI +
Sbjct: 5 LYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAIEGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQQIGGRGLVVN 77
>gi|156835802|ref|XP_001642166.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112599|gb|EDO14308.1| hypothetical protein Kpol_150p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 138
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 48/73 (65%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
++IGRLNK+ E D+ F+++G + +++VR+ TG S+ + +L+Y+ +++ + A+ L
Sbjct: 36 IYIGRLNKDLTEGDILTVFSQFGVPVDIKLVRENETGSSRGFAYLKYEDQRSTILAVDNL 95
Query: 153 NRQNFQGSEIIVD 165
N G+ I+VD
Sbjct: 96 NGAEIAGNAIVVD 108
>gi|383860217|ref|XP_003705587.1| PREDICTED: cleavage stimulation factor subunit 2-like [Megachile
rotundata]
Length = 441
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|344270065|ref|XP_003406866.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Loxodonta africana]
Length = 229
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+EY+ E+ +
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G ++VD E GR + GW+PR
Sbjct: 160 AYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|307202383|gb|EFN81811.1| Cleavage stimulation factor 64 kDa subunit [Harpegnathos saltator]
Length = 439
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|154416377|ref|XP_001581211.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915436|gb|EAY20225.1| hypothetical protein TVAG_021720 [Trichomonas vaginalis G3]
Length = 202
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T T+ +G L+ + E L+ F+E+G VIS R+ +G SK +GF+EY ++ AI
Sbjct: 44 TITVHVGNLSFETTEESLKIKFSEFGNVISSRIPVRAQSGKSKGFGFIEYATQEEADKAI 103
Query: 150 RALNRQNFQGSEIIVDF 166
+N++ F+G I+VD
Sbjct: 104 AEMNKKEFEGRTIVVDI 120
>gi|367005232|ref|XP_003687348.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
gi|357525652|emb|CCE64914.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
Length = 309
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF----------VTGHS 131
P+ +TDP RT+F+GRL + E L++ F +YG++ VR++R+ G S
Sbjct: 103 PNIINTDPYRTIFVGRLPYDIDEISLQKIFIKYGQIEKVRIIRNSHGKKENSNTPTVGKS 162
Query: 132 KRYGFLEYDCEKACLAAIRALNRQN---FQGSEIIVDFECGRVLPGWKP 177
+ YGF+ ++ + A + + G IVD E GR + +KP
Sbjct: 163 RGYGFIVFEDTYSSKMAFKDIGTHKGIEINGRTCIVDIERGRTVRYFKP 211
>gi|193579992|ref|XP_001945585.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like isoform
3 [Acyrthosiphon pisum]
gi|328708407|ref|XP_003243680.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like isoform
2 [Acyrthosiphon pisum]
Length = 472
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DL+ F+ +GK++S V+RD + +S +Y F+E+D
Sbjct: 229 PSADIAPPENVLFVCKLNPVTSDDDLQIIFSRFGKIVSCEVIRDKKSENSLQYAFVEFDN 288
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
+K+C A ++ I VDF W LG G G
Sbjct: 289 QKSCEDAYLKMDNVLIDDRRIHVDFSQSVSKIKW----LGKGRG 328
>gi|281354415|gb|EFB29999.1| hypothetical protein PANDA_019778 [Ailuropoda melanoleuca]
Length = 568
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 94 FIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALN 153
+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R LN
Sbjct: 5 IVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLN 64
Query: 154 RQNFQGSEIIVD 165
+ F G + VD
Sbjct: 65 GREFSGRALRVD 76
>gi|440906344|gb|ELR56614.1| U1 small nuclear ribonucleoprotein 70 kDa, partial [Bos grunniens
mutus]
Length = 222
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+EY+ E+ +
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G ++VD E GR + GW+PR
Sbjct: 160 AYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|380028061|ref|XP_003697730.1| PREDICTED: cleavage stimulation factor subunit 2-like [Apis florea]
Length = 441
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|195158659|ref|XP_002020203.1| GL13859 [Drosophila persimilis]
gi|194116972|gb|EDW39015.1| GL13859 [Drosophila persimilis]
Length = 615
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G V V+RD TG S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G G+L F
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVEGVDGKLDF 340
>gi|452823773|gb|EME30781.1| mRNA splicing factor, putative isoform 1 [Galdieria sulphuraria]
Length = 291
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+ T+F+G + N+ E L++ ++ G ++S RVV D TG K Y F EY + L+AI
Sbjct: 4 STTVFVGNIAYNTSEEQLQEILSQIGPILSFRVVYDRETGKPKGYAFCEYPDAEMALSAI 63
Query: 150 RALNRQNFQGSEIIVDF 166
R LN G + VD
Sbjct: 64 RNLNGTELNGRTLRVDL 80
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 48/74 (64%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L+ + E L++AF+++G+VI RV+ D TG S+ +GF+ + + +A+ AL
Sbjct: 42 LFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTAL 101
Query: 153 NRQNFQGSEIIVDF 166
+ Q+ G +I V++
Sbjct: 102 DGQDLHGRQIRVNY 115
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
F+G L+ N+ + DL+ AF ++G+V +VV D +G S+ +GF+ +D +KA A+ A+
Sbjct: 9 CFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEAM 68
Query: 153 NRQNFQGSEIIVD 165
N + G I V+
Sbjct: 69 NGIDLDGRNITVE 81
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 78 STYKPHTSSTD---PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRY 134
+T K T + D PT LF+G ++ N E L + F E+G++ VR++ D +G SK +
Sbjct: 226 ATKKNKTDAVDESAPTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGF 285
Query: 135 GFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR 194
G++E+ + A+ A N G E+ +DF R G G G N R
Sbjct: 286 GYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPRT-------NDGPGAGNKSNDRAAR 338
Query: 195 FG 196
FG
Sbjct: 339 FG 340
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P TLF+G ++ ++ E + + F E+G + +VR+ D TG K +G++E + AA
Sbjct: 346 PAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMSSIEEAQAA 405
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
AL + G I +D+ R
Sbjct: 406 FTALQGADIAGRPIRLDYAAER 427
>gi|66516308|ref|XP_623321.1| PREDICTED: cleavage stimulation factor subunit 2 [Apis mellifera]
Length = 441
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|345496803|ref|XP_003427819.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Nasonia vitripennis]
Length = 425
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|281206242|gb|EFA80431.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Polysphondylium pallidum PN500]
Length = 539
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN ++ DLE F+ +G + S V+RD VT S Y F+EY+
Sbjct: 241 PDADIKPPENVLFVCKLNPDTSSEDLELCFSSFGNIRSCEVIRDPVTNDSLCYAFVEYET 300
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRR-LGGG 183
+K C A + I VDF +V G+ ++ L GG
Sbjct: 301 KKQCETAYSKMENALIDERRIHVDFCQSIAKVKFGYGAKKFLSGG 345
>gi|149276657|ref|ZP_01882800.1| RNA binding protein [Pedobacter sp. BAL39]
gi|149232326|gb|EDM37702.1| RNA binding protein [Pedobacter sp. BAL39]
Length = 107
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G L+ + E DL + +G+V+++++VRD VT SK Y FLE ++ A+ AL
Sbjct: 4 IFVGGLSSETSEMDLVMFISLHGQVVTIKIVRDKVTRKSKGYAFLEMANQEEADKAVAAL 63
Query: 153 NRQNFQGSEIIV 164
N F+G+E+ V
Sbjct: 64 NGATFKGNELTV 75
>gi|71416168|ref|XP_810125.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70874611|gb|EAN88274.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 497
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + L F++YG+V+S VVRD TG+S YGF+E++ +AC A
Sbjct: 397 PENVLFVCKLNPLTTGEGLRMCFSQYGRVVSTDVVRDRKTGNSLCYGFVEFEEVEACYRA 456
Query: 149 IRALNRQNFQGSEIIVDF 166
+ +++ I VDF
Sbjct: 457 FKKMDQALVDDHRIHVDF 474
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila ATCC
42464]
Length = 153
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ EA L Q F E+G+V VV+D TG S+ +GF+ Y E AI A+
Sbjct: 4 LFIGGLAWHTEEATLRQKFEEFGEVEEAVVVKDRDTGRSRGFGFVRYINEDDAQKAITAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G +I VD
Sbjct: 64 NNVEFDGRQIRVD 76
>gi|119489203|ref|XP_001262853.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119411011|gb|EAW20956.1| RNA binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 462
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL+ F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLGGGWGG 186
+K C A + I VDF ++ W+ R GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSQRGGFGG 350
>gi|120600464|ref|YP_965038.1| RNP-1 like RNA-binding protein [Shewanella sp. W3-18-1]
gi|146294592|ref|YP_001185016.1| RNP-1 like RNA-binding protein [Shewanella putrefaciens CN-32]
gi|386312207|ref|YP_006008372.1| RNP-1 like RNA-binding protein [Shewanella putrefaciens 200]
gi|120560557|gb|ABM26484.1| RNP-1 like RNA-binding protein [Shewanella sp. W3-18-1]
gi|145566282|gb|ABP77217.1| RNP-1 like RNA-binding protein [Shewanella putrefaciens CN-32]
gi|319424832|gb|ADV52906.1| RNP-1 like RNA-binding protein [Shewanella putrefaciens 200]
Length = 153
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 71 AILRALRSTYKPHTSSTD--------PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRV 122
AI+ +L + P TSS+ PT TL++G L E +++ F E+G V SVR+
Sbjct: 35 AIIASLVFKFVPETSSSHASEEQYVGPTMTLYVGNLPYRVHEGEVKVLFGEFGPVNSVRL 94
Query: 123 VRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQ 158
VRD TG K +GF+E E A+ LN NFQ
Sbjct: 95 VRDRKTGRRKGFGFVEM-SESGAQKAMVKLNDYNFQ 129
>gi|395547925|ref|XP_003775192.1| PREDICTED: cleavage stimulation factor subunit 2 [Sarcophilus
harrisii]
Length = 556
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 95 IGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNR 154
+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R LN
Sbjct: 5 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 64
Query: 155 QNFQGSEIIVD 165
+ F G + VD
Sbjct: 65 REFSGRALRVD 75
>gi|225734047|pdb|3CW1|K Chain K, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734056|pdb|3CW1|6 Chain 6, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734065|pdb|3CW1|7 Chain 7, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734074|pdb|3CW1|8 Chain 8, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 216
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D +TLF+ R+N ++ E+ L + F YG + + +V +G + Y F+EY+ E+ +
Sbjct: 100 DAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHS 159
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
A + + + G ++VD E GR + GW+PR
Sbjct: 160 AYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190
>gi|156553552|ref|XP_001601896.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Nasonia vitripennis]
Length = 434
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q+F ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|121596408|ref|YP_988304.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608488|gb|ABM44228.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 121
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DLEQ F+++G V S +V+ + TG SK +GF+E + AAI
Sbjct: 5 LYVGNLPYTFRDQDLEQTFSQFGAVQSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIHGA 64
Query: 153 NRQNFQGSEIIVD 165
+ QN+ G +++V+
Sbjct: 65 HGQNYGGRDLVVN 77
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 80 YKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY 139
Y H SS+ LFIG L+ + L+ AFA YG+V+ RV+ D TG S+ +GF+ +
Sbjct: 29 YLRHMSSS----KLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNF 84
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
+++ +A+ A++ Q+ G I V + R
Sbjct: 85 TSDESATSALSAMDGQDLNGRNIRVSYANDR 115
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 81 KPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYD 140
KP S+ +P TLF+GRL+ N +A L++ F G VI RV+ + TG S+ YG+++++
Sbjct: 159 KPAASTEEPA-TLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFE 217
Query: 141 CEKACLAAIRALNRQNFQGSEIIVDFECGR 170
+ A A+ + + G I +D G+
Sbjct: 218 SKSAAEKALEEMQGKEIDGRPINLDMSTGK 247
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 78 STYKPHTSSTD-------------PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVR 124
ST KPH S ++ P+ TLFIG L+ N+ +L F EYG VIS RV
Sbjct: 244 STGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPT 303
Query: 125 DFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
T K +G++++ AA+ A+N + +G +DF R
Sbjct: 304 HPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLDFSTPR 349
>gi|259489992|ref|NP_001159130.1| hypothetical protein [Zea mays]
gi|223942157|gb|ACN25162.1| unknown [Zea mays]
gi|413925479|gb|AFW65411.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 499
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R +F+G + ++ E L Q E G V+S R+V D TG K YGF EY E+ L+A R
Sbjct: 11 RCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARR 70
Query: 151 ALNRQNFQGSEIIVDF-ECGR 170
L G ++ VDF E GR
Sbjct: 71 NLQGYEINGRQLRVDFAESGR 91
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L+ ++ + L +AF +YG+VI RV+ D TG S+ +GF+ + + +AI+AL
Sbjct: 42 LFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQAL 101
Query: 153 NRQNFQGSEIIVDFECGR 170
+ Q+ G + V++ R
Sbjct: 102 DGQDLHGRRVRVNYATDR 119
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 71 AILRALRSTYKPHTSSTDP---------TRTLFIGRLNKNSREADLEQAFAEYGKVISVR 121
A LR + + + S P + LFIG ++ + + L++AFA YG+VI R
Sbjct: 2 AFLRKVGNLVRQSAGSGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEAR 61
Query: 122 VVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
V+ D TG S+ +GF+ Y AAI ++ ++ QG + V +
Sbjct: 62 VIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKDLQGRIVRVSY 106
>gi|157137809|ref|XP_001664044.1| RNA-binding protein [Aedes aegypti]
gi|108869641|gb|EAT33866.1| AAEL013869-PA [Aedes aegypti]
Length = 399
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F E G VIS+++V D +G K YGF EY ++ L+A+R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFCEVGPVISLKLVFDRESGKPKGYGFCEYKDQETALSAMR 73
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 74 NLNGYEIGGRALRVDNAC 91
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 81 KPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYD 140
KP S+ +P TLF+GRL+ N +A L++ F G VI RV+ + TG S+ YG+++++
Sbjct: 159 KPAASTEEPA-TLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFE 217
Query: 141 CEKACLAAIRALNRQNFQGSEIIVDFECGR 170
+ A A+ + + G I +D G+
Sbjct: 218 SKSAAEKALEEMQGKEIDGRPINLDMSTGK 247
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 78 STYKPHTSSTD-------------PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVR 124
ST KPH S ++ P+ TLFIG L+ N+ +L F EYG VIS RV
Sbjct: 244 STGKPHASKSNNDRAKQYGDSQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPT 303
Query: 125 DFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGR 170
T K +G++++ AA+ A+N + +G +DF R
Sbjct: 304 HPDTQQPKGFGYVQFSSVDEAKAALEAMNGEYIEGRPCRLDFSTPR 349
>gi|319411847|emb|CBQ73890.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Sporisorium reilianum SRZ2]
Length = 543
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN +R DLE F+ +GK++S V++D TG S +Y F+E+D + A
Sbjct: 254 PENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDQKDDAERA 313
Query: 149 IRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLGG--------GWGG 186
+ I VDF R+ W R GG GWGG
Sbjct: 314 YFKMQNVLVDDRRIWVDFSQSVSRLHGDWVRGRNGGREAPKGHYGWGG 361
>gi|198449749|ref|XP_002136956.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
gi|198130740|gb|EDY67514.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G V V+RD TG S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFEE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G G+L F
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVEGVDGKLDF 340
>gi|402226623|gb|EJU06683.1| cyclophilin-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 490
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +GK++S +V+RD TG S +Y F+E+D
Sbjct: 239 PFANVRPPENVLFVCKLNSVTRDEDLELIFSRFGKIMSCQVIRDKKTGDSLQYAFIEFDK 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+ A + I VDF
Sbjct: 299 REDAEQAYFKMQNVLVDDRRIWVDF 323
>gi|332376873|gb|AEE63576.1| unknown [Dendroctonus ponderosae]
Length = 481
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+ S V+RD +G S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKSGDSLQYAFIEFEE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
+KAC A + I VDF W LG G G
Sbjct: 291 QKACEDAYFKMGNVLIDDRRIHVDFSQSVSKVKW----LGKGRG 330
>gi|407832806|gb|EKF98602.1| hypothetical protein TCSYLVIO_010501 [Trypanosoma cruzi]
Length = 497
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 2 SDEQKSAKNSPSSHHSEVRDSKSSSQTVEPRDAKSSSGQTVKYWYPYCITYDPIQAGSID 61
+DE +S + +P +H E S + E R + S Q + ++ ++
Sbjct: 326 TDELQSVEYNPH-YHGEYLSSDDEAPRAESRKERESRHQAIMR----------MRQDKLN 374
Query: 62 GTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVR 121
T T+ +L L P LF+ +LN + L F++YG+V+S
Sbjct: 375 ETRTL-----MLNLLDGIADVSGELKPPENVLFVCKLNPLTTGDGLRMCFSQYGRVVSTD 429
Query: 122 VVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
VVRD TG+S YGF+E++ +AC A + +++ I VDF
Sbjct: 430 VVRDRKTGNSLCYGFVEFEEVEACYRAFKKMDQALVDDHRIHVDF 474
>gi|336470127|gb|EGO58289.1| hypothetical protein NEUTE1DRAFT_64015 [Neurospora tetrasperma FGSC
2508]
gi|350290179|gb|EGZ71393.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 415
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR--------YGFLEY 139
D +TL + RL+ + E DLE+ F+ YG + +R++RD + Y F+ +
Sbjct: 99 DAFKTLIVARLDYRADEQDLEREFSRYGPIERIRIIRDTHADENPNKKKKPHRGYAFVVF 158
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ EK AA+ + + I VD E GR + GWKPR
Sbjct: 159 EREKDMRAALDGCDGARIKDRRIKVDVERGRTVKGWKPR 197
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L+ ++ E L +AFA+YG + V V+RD TG S+ +GF++YD + A+ +
Sbjct: 7 LFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGM 66
Query: 153 NRQNFQGSEIIVD----FECGRVLPGWKPRRLGGGWGGNRNSGQLR 194
N ++ G I VD G++ R GG+ G+R+ G R
Sbjct: 67 NGKSVDGRTIRVDEAGKGGGRSGGGGYRDNRGQGGY-GDRSGGSYR 111
>gi|70982374|ref|XP_746715.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Aspergillus
fumigatus Af293]
gi|74666620|sp|Q4WAQ9.1|PPIL4_ASPFU RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|66844339|gb|EAL84677.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Aspergillus fumigatus Af293]
gi|159123042|gb|EDP48162.1| RNA binding protein, putative [Aspergillus fumigatus A1163]
Length = 459
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL+ F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLGGGWGG 186
+K C A + I VDF ++ W+ R GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSQRGGFGG 350
>gi|118379871|ref|XP_001023101.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila]
gi|89304868|gb|EAS02856.1| hypothetical protein TTHERM_00353440 [Tetrahymena thermophila
SB210]
Length = 1019
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 15/92 (16%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FIG LN + E D+ F+++G+++ +R+VRD TG SK Y FL Y+ +++ + A+
Sbjct: 775 IFIGGLNYDLNEGDISTVFSQWGQIVDLRLVRDKKTGRSKGYCFLAYEDQRSTILAVENF 834
Query: 153 NRQNFQGSEIIVDFECGRVL-----PGWKPRR 179
N+ N CGR++ +KP R
Sbjct: 835 NQINL----------CGRIIGVNHVSKYKPPR 856
>gi|85091763|ref|XP_959061.1| hypothetical protein NCU07548 [Neurospora crassa OR74A]
gi|28920458|gb|EAA29825.1| predicted protein [Neurospora crassa OR74A]
Length = 415
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKR--------YGFLEY 139
D +TL + RL+ + E DLE+ F+ YG + +R++RD + Y F+ +
Sbjct: 99 DAFKTLIVARLDYRADEQDLEREFSRYGPIERIRIIRDTHADENPNKKKKPHRGYAFVVF 158
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
+ EK AA+ + + I VD E GR + GWKPR
Sbjct: 159 EREKDMRAALDGCDGARIKDRRIKVDVERGRTVKGWKPR 197
>gi|332529248|ref|ZP_08405212.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332041471|gb|EGI77833.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 110
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L+ + R+ DL+Q F +G V S +V+ D +G SK +GF+E AAIR L
Sbjct: 5 LYVGNLSYSVRDDDLQQQFGAFGDVQSAKVMMDRDSGRSKGFGFVEMGSADQAEAAIRGL 64
Query: 153 NRQNFQGSEIIVDF 166
+ QN G +++V+
Sbjct: 65 HGQNVGGRDMVVNI 78
>gi|102269210|gb|ABF55966.2| cleavage stimulation factor 64-kDa subunit [Bombyx mori]
Length = 326
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 18 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 77
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 78 NLNGYEIGGRSLRVDNAC 95
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q+F ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S DP FIG L ++ + L AF +YG ++ +VV D +G S+ +GF+ +D +KA
Sbjct: 2 SEDPEYRCFIGGLAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAM 61
Query: 146 LAAIRALNRQNFQGSEIIVD 165
AI A+N + G I VD
Sbjct: 62 DEAIAAMNGMDLDGRTITVD 81
>gi|119773336|ref|YP_926076.1| RNA-binding protein [Shewanella amazonensis SB2B]
gi|119765836|gb|ABL98406.1| RNA-binding protein [Shewanella amazonensis SB2B]
Length = 151
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
T T PT TL++G L E D++ FAEYG V SVR+VRD TG K +GF+E E
Sbjct: 56 ETDYTGPTMTLYVGNLPYRVHEGDVKSLFAEYGPVNSVRLVRDRKTGRRKGFGFVEMS-E 114
Query: 143 KACLAAIRALNRQNFQ 158
A+ LN FQ
Sbjct: 115 SGAQKAMVKLNDYTFQ 130
>gi|302798549|ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
gi|300151088|gb|EFJ17735.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
Length = 246
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 117 VISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWK 176
V+ VR+V D + + Y F+EY + AA + + + ++VD E GR +P W+
Sbjct: 34 VLQVRLVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWR 93
Query: 177 PRRLGGGWGGNRNSG 191
PRRLGGG G R G
Sbjct: 94 PRRLGGGLGSTRVGG 108
>gi|347535511|ref|YP_004842936.1| putative RNA-binding protein RbpA [Flavobacterium branchiophilum
FL-15]
gi|345528669|emb|CCB68699.1| Putative RNA-binding protein RbpA [Flavobacterium branchiophilum
FL-15]
Length = 117
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+F+G L + EADL+++F YG V SV+++ D TG SK +GF+E + AI
Sbjct: 2 NIFVGSLPFSIEEADLKESFEAYGAVDSVKIITDKFTGRSKGFGFVEMPNDSEAQKAIDE 61
Query: 152 LNRQNFQGSEIIVD 165
LN QG I+V+
Sbjct: 62 LNGATVQGRAIVVN 75
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LFI L+ + E L AF +G+++ V+++ D ++ SK Y FLEY E+A AA+
Sbjct: 283 TKKLFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAAL 342
Query: 150 RALNRQNFQGSEIIVD 165
+ +N + G I+VD
Sbjct: 343 KEMNGKIINGWMIVVD 358
>gi|365987429|ref|XP_003670546.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
gi|343769316|emb|CCD25303.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
Length = 323
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD-FVTGHSKRYGFLEY- 139
P+ TDP RT+F+GRL + E L++ F ++G++ +R+VRD F SK YGF+ +
Sbjct: 103 PNIKDTDPYRTIFVGRLPYDIDELQLQKHFLKFGQIEKIRIVRDKFNNNKSKGYGFIVFH 162
Query: 140 ---DCEKAC--LAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
+ AC + R L G IVD E R + ++P
Sbjct: 163 DPISSKMACKEIGVHRGL---EINGRICIVDIERSRTVKYFRP 202
>gi|332026097|gb|EGI66245.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Acromyrmex echinatior]
Length = 504
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++ V+RD TG S +Y F+E+
Sbjct: 231 PDADIAPPENVLFVCKLNPVTNDDDLEIIFSRFGKIVGCEVIRDHQTGDSLQYAFIEFAD 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
K+C A ++ I VDF
Sbjct: 291 RKSCEDAYFKMDNVLIDDRRIHVDF 315
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G L+ ++ E LE+AF+EYGKVI +VV + TG S+ +GF+ + +A AAIR +
Sbjct: 9 IFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGM 68
Query: 153 NRQNFQGSEIIVD 165
+ G I V+
Sbjct: 69 HNGELDGRTISVN 81
>gi|218185350|gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R +F+G + ++ E L Q E G V+S R+V D TG K YGF EY E+ L+A R
Sbjct: 12 RCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARR 71
Query: 151 ALNRQNFQGSEIIVDF-ECGR 170
L G ++ VDF E GR
Sbjct: 72 NLQGYEINGRQLRVDFAENGR 92
>gi|320032010|gb|EFW13966.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str.
Silveira]
Length = 443
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
+K C A + I VDF ++ W+ +R G GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRSATNAKRAGQRGGFGG 351
>gi|119177713|ref|XP_001240599.1| hypothetical protein CIMG_07762 [Coccidioides immitis RS]
gi|392867436|gb|EAS29335.2| peptidyl-prolyl cis-trans isomerase-like 4 [Coccidioides immitis
RS]
Length = 443
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
+K C A + I VDF ++ W+ +R G GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRSATNAKRAGQRGGFGG 351
>gi|402086968|gb|EJT81866.1| hypothetical protein GGTG_01840 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 192
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ E L Q F E+G V VV+D TG S+ +GF+ Y E AI A+
Sbjct: 4 LFIGGLAWHTEEGTLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTNEDDAQRAISAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 64 NNVEFDGRTIRVD 76
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%)
Query: 81 KPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYD 140
K +S+ + + LF+G L+ N E L F ++G++ +VRVV D +G SK +G++EY
Sbjct: 292 KTVSSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYT 351
Query: 141 CEKACLAAIRALNRQNFQGSEIIVDFECGR 170
+A A+ + ++ G I VDF R
Sbjct: 352 TNEAAKKALEEMKGKDIDGRTINVDFSAPR 381
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+ T+F+ L+ + E ++ F +G ++ +R+ D +G K + +++YD + A+
Sbjct: 401 SETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAV 460
Query: 150 RALNRQNFQGSEIIVDFECGR 170
+N G I DF R
Sbjct: 461 EEMNGALVAGRAIRTDFSTPR 481
>gi|228471461|ref|ZP_04056246.1| 31 kDa ribonucleoprotein [Porphyromonas uenonis 60-3]
gi|228306729|gb|EEK15874.1| 31 kDa ribonucleoprotein [Porphyromonas uenonis 60-3]
Length = 86
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TL++G L+ RE DLEQ +E+G+V + RVV D TG S+ +GF + E A AI A
Sbjct: 2 TLYLGNLSYRVRENDLEQLLSEFGEVSNARVVMDRATGRSRGFGFADMADEDAR-RAIEA 60
Query: 152 LNRQNFQGSEIIV 164
L+ Q F+G +++
Sbjct: 61 LSEQEFEGRRLLI 73
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+S D F+G L + DLE+AF++YG V+ +++ D TG S+ +GF+ + E +
Sbjct: 2 ASADVEYRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDS 61
Query: 145 CLAAIRALNRQNFQGSEIIVD 165
AI +N QN G I V+
Sbjct: 62 MRDAIEGMNGQNLDGRNITVN 82
>gi|307166099|gb|EFN60351.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Camponotus floridanus]
Length = 490
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK+I V+RD TG S +Y F+E+
Sbjct: 231 PDADIAPPENVLFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDHQTGDSLQYAFIEFAD 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
K+C A ++ I VDF
Sbjct: 291 RKSCEDAYFKMDNVLIDDRRIHVDF 315
>gi|389624649|ref|XP_003709978.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|351649507|gb|EHA57366.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
70-15]
gi|440467437|gb|ELQ36660.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae Y34]
gi|440480452|gb|ELQ61114.1| cleavage stimulation factor 64-kDa subunit [Magnaporthe oryzae
P131]
Length = 305
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
SS P+R +F+G + E + F+ GKV++ R+V D TG K +GF EY +
Sbjct: 2 SSKPPSRVVFVGNIPYGLSEEQITDIFSRAGKVLNFRLVYDRETGKPKGFGFAEYPDNDS 61
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
+A+R LN G ++ VDF
Sbjct: 62 AASAVRNLNDTEIMGRKLRVDF 83
>gi|115484443|ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77548917|gb|ABA91714.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113644587|dbj|BAF27728.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R +F+G + ++ E L Q E G V+S R+V D TG K YGF EY E+ L+A R
Sbjct: 12 RCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARR 71
Query: 151 ALNRQNFQGSEIIVDF-ECGR 170
L G ++ VDF E GR
Sbjct: 72 NLQGYEINGRQLRVDFAENGR 92
>gi|270000744|gb|EEZ97191.1| hypothetical protein TcasGA2_TC004378 [Tribolium castaneum]
Length = 409
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F E G+V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMR 73
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 74 NLNGYEIGGRNLRVDNAC 91
>gi|332300371|ref|YP_004442292.1| RNP-1 like RNA-binding protein [Porphyromonas asaccharolytica DSM
20707]
gi|332177434|gb|AEE13124.1| RNP-1 like RNA-binding protein [Porphyromonas asaccharolytica DSM
20707]
Length = 86
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TL++G L+ RE DLEQ +E+G+V + RVV D TG S+ +GF + E A AI A
Sbjct: 2 TLYLGNLSYRVRENDLEQLLSEFGEVSNARVVMDRATGRSRGFGFADMADEDAR-RAIEA 60
Query: 152 LNRQNFQGSEIIV 164
L+ Q F+G +++
Sbjct: 61 LSEQEFEGRRLLI 73
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
++ RT++IG L + E L FA+ G+VISV+V+R+ TG S+RYGF+E++ +A
Sbjct: 75 SEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAE 134
Query: 147 AAIRALN 153
+++ N
Sbjct: 135 KVLQSYN 141
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 78 STYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
+T T S T+F+G L+ + + +L Q+F+++G V+SV++ K GF+
Sbjct: 278 ATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPA------GKGCGFV 331
Query: 138 EYDCEKACLAAIRALN 153
++ A AI LN
Sbjct: 332 QFSERSAAEDAIEKLN 347
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 152
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L + R+ DL+Q+F ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAINGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q G ++V+
Sbjct: 65 NGQPLGGRSVVVN 77
>gi|194745953|ref|XP_001955449.1| GF18772 [Drosophila ananassae]
gi|190628486|gb|EDV44010.1| GF18772 [Drosophila ananassae]
Length = 621
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G V V+RD TG S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFED 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G G+L F
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGADGKLDF 340
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum CS3096]
Length = 178
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ EA L Q F E+G V VV+D TG S+ +GF+ Y E AI A+
Sbjct: 4 LFIGGLAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQNAIAAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 64 NNVEFDGRNIRVD 76
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L+ + + L+ AF+ +G V++ RV+ D TG S+ +GF+++ + +A+ A+
Sbjct: 38 LFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAM 97
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
+ Q G I V + R PR G+G
Sbjct: 98 DGQELHGRNIRVSYATERAPRPGGPRSFNNGFG 130
>gi|195331754|ref|XP_002032564.1| GM23461 [Drosophila sechellia]
gi|194121507|gb|EDW43550.1| GM23461 [Drosophila sechellia]
Length = 464
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G + V+RD TG S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G + G+L F
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGIEGDYGKLDF 340
>gi|452845346|gb|EME47279.1| hypothetical protein DOTSEDRAFT_69274 [Dothistroma septosporum
NZE10]
Length = 353
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 49 CITYDPIQAGSIDGTDTIPHDRAIL-RALRSTYKPHTSST---DPTRTLFIGRLNKNSRE 104
+TY +Q D + + ++ + YKP+ + D +TLF+ R++ ++
Sbjct: 58 VVTYSVMQKKENDKLEKQEKQKYLMEHGHQELYKPNEDANIRGDAFKTLFVSRMSYDTST 117
Query: 105 ADLEQAFAEYGKVISVRVVRDFVTGHSKR-----YGFLEYDCEKACLAAIRALNRQNFQG 159
DLE+ F +G + VR+V+D K+ YGF+ ++ EK A + +G
Sbjct: 118 KDLEKEFGRFGPIERVRIVQDRGEKSKKKGKSRGYGFVLFEKEKDMKTAYKDCENLTIRG 177
Query: 160 SEIIVDFECGRVLPGWKPR 178
++VD E GR + GW+PR
Sbjct: 178 RRVLVDVERGRTVNGWRPR 196
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G ++ ++ + L ++FA YG+VI V+V+ D TG S+ +GF+ + + +AI+ +
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGM 101
Query: 153 NRQNFQGSEIIVDFECGRVLP 173
+ Q+ G I V++ R P
Sbjct: 102 DGQDLHGRRIRVNYATERSRP 122
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DL+QAF+ +G V S +V+ + TG SK +GF+E + +AI+ +
Sbjct: 5 LYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q+ G ++V+
Sbjct: 65 NGQSLGGRSLVVN 77
>gi|322788027|gb|EFZ13868.1| hypothetical protein SINV_14012 [Solenopsis invicta]
Length = 291
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E +L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 17 RSVFVGNIPYEATEENLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 76
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 77 NLNGYEIGGRTLRVDNAC 94
>gi|307196041|gb|EFN77766.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Harpegnathos saltator]
Length = 451
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F +GK+I V+RD TG S +Y F+E+
Sbjct: 231 PDADIAPPENVLFVCKLNPVTNDDDLEIIFNRFGKIIGCEVIRDHQTGDSLQYAFIEFAD 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
K+C A ++ I VDF
Sbjct: 291 RKSCEEAYFKMDNVLIDDRRIHVDF 315
>gi|427794309|gb|JAA62606.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 412
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 13/143 (9%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN + + DLE F+ +G V S V+RD TG S +Y F+E++
Sbjct: 149 PDADAAPPENVLFVCKLNPVTTDEDLEIIFSRFGPVKSCEVIRDRKTGDSLQYAFVEFEQ 208
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
+ C A ++ I VDF WK + G + + G+ G R
Sbjct: 209 REHCENAFFKMDNVLIDDRRIHVDFSQSVAKLRWKGKGRGVEYINDDKGGKKPRGARY-- 266
Query: 202 WVKPVQLMNERELGEWRKQGGAG 224
EL + ++GGAG
Sbjct: 267 -----------ELKDTARRGGAG 278
>gi|22330574|ref|NP_177325.2| cleavage stimulating factor 64 [Arabidopsis thaliana]
gi|7239507|gb|AAF43233.1|AC012654_17 Contains similarity to the polyadenylation factor 64 kDa subunit
from Xenopus laevis gb|U17394; It contains RNA
recognition motif PF|00076. ESTs gb|AI993960 and T42211
come from this gene [Arabidopsis thaliana]
gi|110738120|dbj|BAF00992.1| cleavage stimulation factor like protein [Arabidopsis thaliana]
gi|332197113|gb|AEE35234.1| cleavage stimulating factor 64 [Arabidopsis thaliana]
Length = 461
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
SS+ R +F+G + ++ E L + E G V+S R+V D TG K YGF EY E+
Sbjct: 3 SSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEET 62
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
L+A R L G ++ VDF
Sbjct: 63 ALSARRNLQSYEINGRQLRVDF 84
>gi|21591633|gb|AAM64164.1|AF515695_1 cleavage stimulation factor 64 [Arabidopsis thaliana]
Length = 461
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
SS+ R +F+G + ++ E L + E G V+S R+V D TG K YGF EY E+
Sbjct: 3 SSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEET 62
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
L+A R L G ++ VDF
Sbjct: 63 ALSARRNLQSYEINGRQLRVDF 84
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 38 SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
+GQ++ Y + I DP A +T+ R + ++ +Y +S++ L++
Sbjct: 155 TGQSLGYGFVNYI--DPKDAE--KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 210
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
L K + +LEQ F++YG++I+ R++ D VTG S+ GF+ +D AI+ LN Q
Sbjct: 211 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGGSRGVGFIRFDKRIEAEEAIKGLNGQKP 270
Query: 158 QGSE--IIVDF 166
G+ I V F
Sbjct: 271 SGAAEPITVKF 281
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%)
Query: 53 DPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFA 112
+P+ G G T R S + ++ D L + L +N + + F
Sbjct: 80 NPVTNGPSGGGTTANGPSNNSRGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFG 139
Query: 113 EYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
G++ S ++VRD +TG S YGF+ Y K AI LN Q I V +
Sbjct: 140 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 193
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ L+ +S E+ L Q F +G V +V+V+RDF T K +GF+ AI +L
Sbjct: 358 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 417
Query: 153 NRQNFQGSEIIVDFECGRV 171
N + V F+ +
Sbjct: 418 NGYRLGDRVLQVSFKTNKT 436
>gi|405117860|gb|AFR92635.1| peptidyl-prolyl cis-trans isomerase-like 4 [Cryptococcus neoformans
var. grubii H99]
Length = 493
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +++ DLE F+ +GK++S VVRD +G S +Y F+E+D
Sbjct: 217 PFAAVRPPENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDE 276
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+A A + I VDF
Sbjct: 277 REAAEQAYFKMQNVLVDDRRIWVDF 301
>gi|357627631|gb|EHJ77269.1| hypothetical protein KGM_03087 [Danaus plexippus]
Length = 425
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F+E G V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 6 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 65
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 66 NLNGYEIGGRSLRVDNAC 83
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LF+ L+ + E L AF +G+++ V+++ D ++ SK Y F+EY E A AA+
Sbjct: 287 TKRLFVTGLSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAGGAAL 346
Query: 150 RALNRQNFQGSEIIVD 165
+A+N + G I+VD
Sbjct: 347 KAMNGEIINGWMIVVD 362
>gi|302511673|ref|XP_003017788.1| hypothetical protein ARB_04672 [Arthroderma benhamiae CBS 112371]
gi|291181359|gb|EFE37143.1| hypothetical protein ARB_04672 [Arthroderma benhamiae CBS 112371]
Length = 497
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G+++S V+RD TG S +Y F+E++
Sbjct: 290 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGRILSCEVIRDKKTGDSLQYAFIEFED 349
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGGNRN 189
+K C A + I VDF ++ W+ RR GG+GG N
Sbjct: 350 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWRTATNARRSSQRGGFGGISN 405
>gi|195107957|ref|XP_001998560.1| GI24038 [Drosophila mojavensis]
gi|193915154|gb|EDW14021.1| GI24038 [Drosophila mojavensis]
Length = 577
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G V V+RD TG S +Y F+E++
Sbjct: 231 PDAEMAPPENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFED 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G + QL F
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGDGSQLDF 340
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ EA L Q F E+G V VV+D TG S+ +GF+ Y E AI A+
Sbjct: 4 LFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYTQENDAQNAIAAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 64 NNVEFDGRTIRVD 76
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 132
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L R+ DL+Q+F ++G V S +V+ + TG SK +GF+E + AAI +
Sbjct: 5 LYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAGM 64
Query: 153 NRQNFQGSEIIVD 165
N Q+ G I V+
Sbjct: 65 NGQSLGGRSITVN 77
>gi|115469460|ref|NP_001058329.1| Os06g0670500 [Oryza sativa Japonica Group]
gi|52076982|dbj|BAD45991.1| peptidylprolyl isomerase-like [Oryza sativa Japonica Group]
gi|113596369|dbj|BAF20243.1| Os06g0670500 [Oryza sativa Japonica Group]
gi|215708797|dbj|BAG94066.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198725|gb|EEC81152.1| hypothetical protein OsI_24063 [Oryza sativa Indica Group]
gi|222636064|gb|EEE66196.1| hypothetical protein OsJ_22317 [Oryza sativa Japonica Group]
Length = 564
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN +++ DL F+ +G V S ++RD+ TG S Y F+E++ ++AC A
Sbjct: 240 PDNVLFVCKLNPVTQDEDLYTIFSRFGTVTSAEIIRDYKTGDSLCYAFIEFETKEACERA 299
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 300 FFKMDNCLIDDRRIHVDF 317
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 62 GTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVR 121
G+ P +I R LR +F+G L+ NS + L AF++YG+V+ R
Sbjct: 50 GSHLQPSKLSIFRTLRFV---------SGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEAR 100
Query: 122 VVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPG---WKPR 178
VV D TG K +GF+ + ++ +AI+AL+ ++ G I ++ +V G +
Sbjct: 101 VVMDPDTGRCKGFGFVTFSAKEEASSAIKALDGKDLGGRRIRCNYAVEKVARGGGRYGSS 160
Query: 179 RLGGG 183
R GGG
Sbjct: 161 RYGGG 165
>gi|308799677|ref|XP_003074619.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116000790|emb|CAL50470.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 318
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P T+FIG + ++ EA L + F E G V +R+V + TG K YGF+E+D ++A
Sbjct: 2 PEGTVFIGNVPYDATEASLTEIFCECGPVRELRLVTERDTGKLKGYGFVEFDDFATAMSA 61
Query: 149 IRALNRQNFQGSEIIVD 165
+R LN + + G ++ VD
Sbjct: 62 VRNLNGREYNGRQLRVD 78
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFIG L+ + +++ FAEYG V V + D +G K +G++++ ++ AA
Sbjct: 333 PSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAA 392
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
+ AL+ Q+ G + VDF R
Sbjct: 393 LEALHGQDVAGRPLRVDFAAPR 414
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 76 LRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
++ T + D + LF+G L+ N E L + F +G+++ RV+ D TG +K +G
Sbjct: 220 IKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFG 279
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
++E+ A + ++ G + VDF R P R
Sbjct: 280 YVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANAR 322
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G ++ ++ + L ++FA YG+VI V+V+ D TG S+ +GF+ + + +AI+ +
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 153 NRQNFQGSEIIVDFECGRVLP 173
+ Q+ G I V++ R P
Sbjct: 102 DGQDLHGRRIRVNYATERSRP 122
>gi|302696235|ref|XP_003037796.1| hypothetical protein SCHCODRAFT_12510 [Schizophyllum commune H4-8]
gi|300111493|gb|EFJ02894.1| hypothetical protein SCHCODRAFT_12510 [Schizophyllum commune H4-8]
Length = 401
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +G ++S +V+RD TG S +Y F+E+D
Sbjct: 239 PFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDK 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVL------------PGWKPRRLGGGWGGNRN 189
+ A + I VDF PG+K R GG+ G +
Sbjct: 299 REEAEQAYFKMQNVLVDDRRIWVDFSQSVARTNGIWSNDIKRGPGYKRGRSAGGFAGRED 358
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G ++ ++ + L ++FA YG+VI V+V+ D TG S+ +GF+ + + +AI+ +
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 153 NRQNFQGSEIIVDFECGRVLP 173
+ Q+ G I V++ R P
Sbjct: 102 DGQDLHGRRIRVNYATERSRP 122
>gi|430741539|ref|YP_007200668.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430013259|gb|AGA24973.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 119
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ L++G L N E+DLE F+++G V S +++ D T SK +GF+E D + AAI+
Sbjct: 3 KKLYVGNLTYNVNESDLEALFSQFGTVQSAQIIVDRDTNRSKGFGFVEMDTDAQAQAAIQ 62
Query: 151 ALNRQNFQGSEIIVD 165
LN + G + V+
Sbjct: 63 GLNGHDHDGRNLTVN 77
>gi|170588491|ref|XP_001899007.1| RNA binding protein, identical [Brugia malayi]
gi|170588493|ref|XP_001899008.1| RNA binding protein, identical [Brugia malayi]
gi|1813684|gb|AAC47624.1| putative RNA binding protein [Brugia malayi]
gi|158593220|gb|EDP31815.1| RNA binding protein, identical [Brugia malayi]
gi|158593221|gb|EDP31816.1| RNA binding protein, identical [Brugia malayi]
gi|208429687|gb|ACI26725.1| putative RNA binding protein [Wuchereria bancrofti]
gi|402582983|gb|EJW76928.1| RNA-binding protein [Wuchereria bancrofti]
Length = 82
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+R++F+G L ++RE D+ F + G V SVR+V D TG + +GF E++ E A A+
Sbjct: 2 SRSVFVGNLPYSAREEDVANFFWQVGPVTSVRIVLDRDTGRPRGFGFCEFETEAAAEQAV 61
Query: 150 RALNRQNFQGSEIIVD 165
++N F G ++ VD
Sbjct: 62 GSMNHAEFMGRQLRVD 77
>gi|413925481|gb|AFW65413.1| hypothetical protein ZEAMMB73_461561 [Zea mays]
Length = 624
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R +F+G + ++ E L Q E G V+S R+V D TG K YGF EY E+ L+A R
Sbjct: 11 RCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARR 70
Query: 151 ALNRQNFQGSEIIVDF-ECGR 170
L G ++ VDF E GR
Sbjct: 71 NLQGYEINGRQLRVDFAESGR 91
>gi|307719265|ref|YP_003874797.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|386347364|ref|YP_006045613.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|306532990|gb|ADN02524.1| RNA-binding region RNP-1 [Spirochaeta thermophila DSM 6192]
gi|339412331|gb|AEJ61896.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 101
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
++ G LN + E L Q F +YG+V SV+++ D +G SK +GF+E E+A AAI AL
Sbjct: 5 IYAGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAISAL 64
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGG--GWGGNRNSG 191
N+ G ++ V+ K GG +GG+R+ G
Sbjct: 65 NQHEVDGRQLRVN----------KAHERGGRSSFGGDRSRG 95
>gi|322797592|gb|EFZ19633.1| hypothetical protein SINV_07432 [Solenopsis invicta]
Length = 508
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +GK++ V+RD TG S +Y F+E+
Sbjct: 249 PDADIAPPENVLFVCKLNPVTNDDDLEIIFSRFGKIVGCEVIRDHQTGDSLQYAFIEFAD 308
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
K+C A ++ I VDF
Sbjct: 309 RKSCEDAYFKMDNVLIDDRRIHVDF 333
>gi|321249482|ref|XP_003191470.1| hypothetical protein CGB_A5130W [Cryptococcus gattii WM276]
gi|317457937|gb|ADV19683.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 505
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +++ DLE F+ +GK++S VVRD +G S +Y F+E+D
Sbjct: 237 PFAAVRPPENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDE 296
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+A A + I VDF
Sbjct: 297 REAAEQAYFKMQNVLVDDRRIWVDF 321
>gi|225560711|gb|EEH08992.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 1140
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 61 DGTDTIPHDRAILRALRSTYKPHTS---STDPTRTLFIGRLNKNSREADLEQAFAEYGKV 117
D +P A ++R T P + ++ TLFIG L+ E D+ AFA+ G +
Sbjct: 578 DPLPEVPTSPASTESVRQTAFPQETPLADSNSNTTLFIGNLHDAVTEQDVAAAFADKGFL 637
Query: 118 ISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECG 169
V + DF TG +GF+++ C A A+ ALN G I ++F G
Sbjct: 638 GKVNLPHDFSTGKHAGFGFVDFPCFFAASGALHALNGGQLHGQVINLEFNHG 689
>gi|72389500|ref|XP_845045.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176728|gb|AAX70828.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70801579|gb|AAZ11486.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 520
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
LF+ RLN + LE F+++GKV SV+V+RD TG S YGF+E+ E+ C A +
Sbjct: 425 VLFVCRLNPLTTSEGLEMCFSQFGKVKSVQVIRDSKTGDSLCYGFVEFADEETCYRAHQK 484
Query: 152 LNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 485 MDNALIDDRRIHVDF 499
>gi|406929710|gb|EKD65230.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+GRL+ + + LEQ F++ GKVIS + + D +G K +GF+E + AI+ L
Sbjct: 5 LFVGRLSYGTTDEQLEQHFSQAGKVISAKAIVDRYSGQGKGFGFVEMATAEEAQKAIQQL 64
Query: 153 NRQNFQGSEIIVD 165
N N I+V+
Sbjct: 65 NNSNLNDRSIVVN 77
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DP+ LF+ L+K + L AFA++G+V+ RVV D V+G SK +GF+ Y +
Sbjct: 32 DPSPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATK 91
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLP 173
I ++ + G I ++ R P
Sbjct: 92 GIEGMDGKFLDGWVIFAEYARPRAPP 117
>gi|308810142|ref|XP_003082380.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116060848|emb|CAL57326.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 485
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 68 HDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFV 127
H+RA++ L P + P LF+ +LN + + DLE F+ +GKV+S V+RDF
Sbjct: 222 HNRAVVLELIGDL-PDAEAKPPEEGLFVCKLNPVTTDEDLEIIFSRFGKVLSCDVIRDFK 280
Query: 128 TGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
TG S Y F+ ++ AA ++ + VDF
Sbjct: 281 TGASLGYAFVNFEHRHEAEAAYFKMDNVLIDDRRVHVDF 319
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++++ RT++IG L + E L FA+ G+VISV+V+R+ TG S+RYGF+E++ +A
Sbjct: 73 NASEDNRTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEA 132
Query: 145 CLAAIRALN 153
+++ N
Sbjct: 133 AEKVLQSYN 141
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 78 STYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
+T T S T+F+G L+ + +L Q+F+++G V+SV++ K GF+
Sbjct: 283 ATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPA------GKGCGFV 336
Query: 138 EYDCEKACLAAIRALN 153
++ A AI LN
Sbjct: 337 QFSERSAAEDAIEKLN 352
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFIG L+ N++ +L F EYG+V+S R+ T K +G++E+ AA
Sbjct: 391 PSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAA 450
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
+ ALN + +G +DF R
Sbjct: 451 LEALNGEYVEGRPCRLDFSTPR 472
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TLF+GRL+ N + L++ F G V RV+ + +G S+ YG+++++ + A++
Sbjct: 292 TLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKE 351
Query: 152 LNRQNFQGSEIIVDFECGRVLP 173
+ G I +D + P
Sbjct: 352 YQGREIDGRPINLDMSESKPRP 373
>gi|402078981|gb|EJT74246.1| hypothetical protein GGTG_08089 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 400
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 68 HDRAILRALR---STYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVR 121
H + R L+ + YKP D +TL + RL+ + E D+E+ F +G + +R
Sbjct: 73 HTEEVARHLKEGPAKYKPLEDPNIRGDAFKTLIVARLSYEADERDIEKEFGRFGTIERIR 132
Query: 122 VVRD---FVTGHSKR-----YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLP 173
+++D G+ KR Y F+ ++ EK AA+ + + + VD E GR +
Sbjct: 133 IIKDTHAHEKGNKKRKPHRGYAFVVFEREKDMRAALDGCDGIRIKDRRVKVDVERGRTVE 192
Query: 174 GWKPR 178
GWKP
Sbjct: 193 GWKPL 197
>gi|380489160|emb|CCF36888.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 314
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S P+R +F+G + E + F+ GKV++ R+V D TG K +GF EY +
Sbjct: 2 SKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSA 61
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
+A+R LN G ++ VDF
Sbjct: 62 ASAVRNLNDYEIMGRKLRVDF 82
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLF+G ++ +++ FAEYG + V + D TG K +G++++ ++ AA
Sbjct: 317 PSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAA 376
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
+ ALN Q+ G I +D+ R
Sbjct: 377 LEALNGQDIGGRAIRIDYATPR 398
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ LF+G ++ N E L + F +G+++ RV+ D TG +K +G++E+ A +
Sbjct: 217 KNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQK 276
Query: 151 ALNRQNFQGSEIIVDFECGRVLP 173
++ G ++ VDF R P
Sbjct: 277 EMHEYELDGRQLNVDFSTPRAKP 299
>gi|392586839|gb|EIW76174.1| cyclophilin-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 443
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ D+E F+ +G ++S +V+RD TG S +Y F+E+D
Sbjct: 234 PFANVRPPENVLFVCKLNPVTRDEDMELIFSRFGTIMSCQVIRDKKTGDSLQYAFIEFDK 293
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLR----FGG 197
+ A + I VDF R W N G+ R F G
Sbjct: 294 REEAEQAYFKMQNVLIDDRRIWVDFSQSVA-------RFNTSWSNNPKIGKRRDAGSFAG 346
Query: 198 RN 199
R+
Sbjct: 347 RD 348
>gi|443895773|dbj|GAC73118.1| cl- channel CLC-3 and related proteins [Pseudozyma antarctica T-34]
Length = 1645
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 13/120 (10%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +R DLE F+ +G+++S V++D TG S +Y F+E+D
Sbjct: 247 PFAEIRPPENILFVCKLNPVTRSEDLELIFSRFGRIMSCEVIKDKKTGDSLQYAFIEFDK 306
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
+ R F+ ++VD V RL G W RN GGR P
Sbjct: 307 KDDA-------ERAYFKMQNVLVDDRRIWVDFSQSVSRLHGDWVKKRN------GGREAP 353
>gi|406983427|gb|EKE04629.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 96
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG LN + E DL + EYG+V S+++++D TG SK +GF+E ++ + + L
Sbjct: 3 LFIGNLNFKTSEEDLMELLKEYGEVKSLQIIKDRDTGRSKGFGFVEMATKEQAESVMENL 62
Query: 153 NRQNFQGSEIIVDF 166
N F G + VD+
Sbjct: 63 NGAEFDGKVLKVDY 76
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TLFIG L+ + +++ FAEYG V V + D +G K +G++++ ++ AA
Sbjct: 346 PSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATAA 405
Query: 149 IRALNRQNFQGSEIIVDFECGR 170
+ AL Q+ G + VDF R
Sbjct: 406 LEALQGQDVAGRPLRVDFAAPR 427
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 76 LRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
++ T + D + LF+G L+ N E L + F +G+++ RV+ D TG +K +G
Sbjct: 233 IKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFG 292
Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
++E+ A + ++ G + VDF R P R
Sbjct: 293 YVEFAKAADAAKAQKDMHEYELDGRPLNVDFSTPRQKPDANAR 335
>gi|195388776|ref|XP_002053055.1| GJ23668 [Drosophila virilis]
gi|194151141|gb|EDW66575.1| GJ23668 [Drosophila virilis]
Length = 530
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G V V+RD TG S +Y F+E++
Sbjct: 231 PDAEMAPPENVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEFED 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRF 195
+K+C AA ++ I VDF W+ G G G G+L F
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGIIGADGRLDF 340
>gi|326494800|dbj|BAJ94519.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R +F+G + ++ E L Q E G V+S R+V D TG K YGF EY E+ L+A R
Sbjct: 11 RCVFVGNIPYDATEEQLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYKDEETALSARR 70
Query: 151 ALNRQNFQGSEIIVDF-ECGR 170
L G ++ VDF E GR
Sbjct: 71 NLQGYEVNGRQLRVDFAENGR 91
>gi|332372985|gb|AEE61634.1| unknown [Dendroctonus ponderosae]
Length = 409
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F E G+V+S ++V D TG K YGF EY ++ L+A+R
Sbjct: 14 RSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFCEYRDQETALSAMR 73
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 74 NLNGYEIGGRSLRVDNAC 91
>gi|193671655|ref|XP_001946102.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Acyrthosiphon pisum]
Length = 388
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R++F+G + + E L+ F E G VIS ++V D TG K YGF EY ++ L+A+R
Sbjct: 12 RSVFVGNIPYEATEEKLKDIFNEVGPVISFKLVYDRETGKPKGYGFCEYKDQETALSAMR 71
Query: 151 ALNRQNFQGSEIIVDFEC 168
LN G + VD C
Sbjct: 72 NLNGYEIGGRTLRVDNAC 89
>gi|430745770|ref|YP_007204899.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017490|gb|AGA29204.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 133
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ L++G L DLEQ F E+G V S +V++D TG SK +GF+E D + AAI
Sbjct: 4 KKLYVGNLAYTVSNTDLEQLFGEFGTVQSAQVIQDRDTGRSKGFGFVEMDSDAEAQAAID 63
Query: 151 ALNRQNFQGSEIIVD 165
L+ Q G + V+
Sbjct: 64 GLHDQEHGGRRLTVN 78
>gi|345328415|ref|XP_001513073.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Ornithorhynchus anatinus]
Length = 1036
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 95 IGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNR 154
+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A+R LN
Sbjct: 456 LGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 515
Query: 155 QNFQGSEIIVD 165
+ F G + VD
Sbjct: 516 REFSGRALRVD 526
>gi|407396213|gb|EKF27402.1| hypothetical protein MOQ_008877 [Trypanosoma cruzi marinkellei]
Length = 498
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + L F++YG+V+S +VRD TG+S YGF+E++ +AC A
Sbjct: 397 PENVLFVCKLNPLTTGEGLRMCFSQYGRVVSSDIVRDRKTGNSLCYGFVEFEEVEACYRA 456
Query: 149 IRALNRQNFQGSEIIVDF 166
+ +++ I VDF
Sbjct: 457 FKKMDQALVDDHRIHVDF 474
>gi|297839015|ref|XP_002887389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333230|gb|EFH63648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 460
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R +F+G + ++ E L + E G V+S R+V D TG K YGF EY E+ L+A R
Sbjct: 8 RCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARR 67
Query: 151 ALNRQNFQGSEIIVDF 166
L G ++ VDF
Sbjct: 68 NLQSYEINGRQLRVDF 83
>gi|90407376|ref|ZP_01215561.1| hypothetical RNA-binding protein [Psychromonas sp. CNPT3]
gi|90311527|gb|EAS39627.1| hypothetical RNA-binding protein [Psychromonas sp. CNPT3]
Length = 152
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 72 ILRALRSTYKPHTSSTDP-----TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF 126
I++ + ST T D T TL++G L + E + F+E+GKV+SVR+++D
Sbjct: 44 IIQFMGSTKTKDTEHEDAEVDFDTITLYVGNLPYRANEIAIRTLFSEHGKVLSVRLMKDK 103
Query: 127 VTGHSKRYGFLEYDCEKACLAAIRALNRQNFQ 158
TG + +GF+E EK L AI ALN Q FQ
Sbjct: 104 HTGKRRGFGFVEMP-EKDALNAINALNEQEFQ 134
>gi|91791602|ref|YP_561253.1| RNA-binding protein [Shewanella denitrificans OS217]
gi|91713604|gb|ABE53530.1| RNA-binding protein [Shewanella denitrificans OS217]
Length = 149
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 71 AILRALRSTYKPHTSS------TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVR 124
A+L +L T+ TSS PT TL++G L E ++++ F EYG V SVR+VR
Sbjct: 36 AVLASLILTFVSDTSSHSDEPYVGPTMTLYVGNLPYRVHEGEVKELFGEYGPVNSVRLVR 95
Query: 125 DFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQ 158
D TG K +GF+E E A+ LN +FQ
Sbjct: 96 DRKTGRRKGFGFVEM-SESGAQKAMTKLNDFSFQ 128
>gi|118367447|ref|XP_001016937.1| cyclophilin-RNA interacting protein [Tetrahymena thermophila]
gi|89298704|gb|EAR96692.1| cyclophilin-RNA interacting protein [Tetrahymena thermophila SB210]
Length = 558
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN ++E DLE F+ +G + VVRD+ TG S +Y F+E++ EK+C A
Sbjct: 235 PENVLFVCQLNPVTQERDLEIIFSRFGVITRCEVVRDWKTGQSLQYAFIEFETEKSCQEA 294
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L+ + E L AF+ YG++I +++ D TG S+ +GF+ Y E+ +AI AL
Sbjct: 33 LFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMAL 92
Query: 153 NRQNFQGSEIIV 164
+ ++ G + V
Sbjct: 93 DGKDLHGRNLRV 104
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 38 SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
+GQ++ Y + I DP A +T+ R + ++ +Y +S++ L++
Sbjct: 350 TGQSLGYGFVNYI--DPKDAE--KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 405
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
L K + +LEQ F++YG++I+ R++ D VTG S+ GF+ +D AI+ LN Q
Sbjct: 406 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP 465
Query: 158 QGS--EIIVDF 166
G+ I V F
Sbjct: 466 PGATEPITVKF 476
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ D L + L +N + +L+ F G++ S ++VRD +TG S YGF+ Y K
Sbjct: 307 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 366
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
AI LN Q I V +
Sbjct: 367 AEKAINTLNGLRLQTKTIKVSY 388
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ L ++ E+ L Q F +G V +V+V+RDF T K +GF+ AI +L
Sbjct: 539 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 598
Query: 153 N 153
N
Sbjct: 599 N 599
>gi|169782058|ref|XP_001825492.1| peptidylprolyl isomerase [Aspergillus oryzae RIB40]
gi|93140623|sp|Q2U256.1|PPIL4_ASPOR RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
gi|83774234|dbj|BAE64359.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868072|gb|EIT77295.1| putative peptidyl prolyl cis-trans isomerase [Aspergillus oryzae
3.042]
Length = 461
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLHLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFEN 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
+K C A + I VDF ++ W+ +R G GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSGQRGGFGG 351
>gi|392568200|gb|EIW61374.1| cyclophilin-like protein [Trametes versicolor FP-101664 SS1]
Length = 444
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P + P LF+ +LN +R+ DLE F+ +G +IS +V+RD TG S +Y F+E+D
Sbjct: 237 PFANVRPPENVLFVCKLNPVTRDEDLELIFSRFGTIISCQVIRDKKTGDSLQYAFIEFDK 296
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+ A + I VDF
Sbjct: 297 REEAEQAYFKMQNVLVDDRRIWVDF 321
>gi|328849877|gb|EGF99050.1| hypothetical protein MELLADRAFT_79554 [Melampsora larici-populina
98AG31]
Length = 259
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P R L+IGR+ + + D+E+ F YG ++ VR++ F GFLEYD + A
Sbjct: 4 PGRRLYIGRIPQEATRTDIEKYFGRYGTLLDVRIMAGF--------GFLEYDQVRDAEDA 55
Query: 149 IRALNRQNFQGSEIIVDF 166
+ LN + F G +IV+F
Sbjct: 56 VHDLNGREFMGDRLIVEF 73
>gi|320587389|gb|EFW99869.1| nf-x1 finger transcription factor [Grosmannia clavigera kw1407]
Length = 1597
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 60 IDGTDTIPHDRAILRALRSTYKPHT-SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVI 118
+D ++T P R +R +T+ HT SS P++ +F+G + E + F+ G+V+
Sbjct: 1251 VDRSETRP--RFQVRLSSATFACHTMSSRPPSKIVFVGNIPYGLSEEQISDIFSSAGRVV 1308
Query: 119 SVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
S R+V D G K +GF EY + +A+R LN G ++ VDF
Sbjct: 1309 SFRLVYDRENGKPKGFGFAEYPDSDSAASAVRNLNDYEVMGRKLRVDF 1356
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L++G L+ N+ + L Q F+E+G+V ++RD TG ++ +GF+ + E+ AA+ AL
Sbjct: 4 LYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDAL 63
Query: 153 NRQNFQGSEIIVDFECGR 170
N Q G I V+ R
Sbjct: 64 NEQELDGRRIRVNVANAR 81
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
++ LF+G ++ N+ E L + F E+G ++SVR+ D TG K +G++E+ + +A
Sbjct: 489 SKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAF 548
Query: 150 RALNRQNFQGSEIIVDF 166
ALN ++ G I +DF
Sbjct: 549 NALNGKDIAGRNIRLDF 565
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
++D +F+G+L+ N + L+ F G+V+ V D TG SK +G++ + +A
Sbjct: 386 NSDANCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAA 445
Query: 146 LAAIRALNRQNFQGSEIIVD 165
AI +N + G + V+
Sbjct: 446 EKAIAEMNGKEIDGRAVNVN 465
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 38 SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
+GQ++ Y + I DP A +T+ R + ++ +Y +S++ L++
Sbjct: 136 TGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 191
Query: 98 LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
L K + +LEQ F++YG++I+ R++ D VTG S+ GF+ +D AI+ LN Q
Sbjct: 192 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 251
Query: 158 QGSE--IIVDF 166
G+ I V F
Sbjct: 252 SGATEPITVKF 262
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 85 SSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
++TD ++T L + L +N + + F G++ S ++VRD +TG S YGF+ Y K
Sbjct: 92 AATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 151
Query: 144 ACLAAIRALNRQNFQGSEIIVDF 166
AI LN Q I V +
Sbjct: 152 DAEKAINTLNGLRLQTKTIKVSY 174
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ L+ +S E+ L Q F +G V +V+V+RDF T K +GF+ AI +L
Sbjct: 338 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 397
Query: 153 N 153
N
Sbjct: 398 N 398
>gi|326517876|dbj|BAK07190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
TR L++G L ++++ +L+ F+ YG V+ VRVVRD+ TG + + F+E+ E+ AA+
Sbjct: 5 TRKLYVGGLPPSAQQDELKDHFSRYGDVLCVRVVRDWETGQGRGFAFVEFADEEGAHAAL 64
Query: 150 RALNRQNFQGSEIIVDFECGRVLP 173
+ + N + VD + R P
Sbjct: 65 QEKEKANHVFGDRTVDVKRARTRP 88
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 34/61 (55%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ +F+G L N + L+ F ++G + V V+R+ T S+ +GF+ +D ++A +
Sbjct: 136 KKVFVGGLRGNITKEHLQSYFEKFGNITDVVVIREGGTQRSRGFGFITFDSDEAMSKVLE 195
Query: 151 A 151
+
Sbjct: 196 S 196
>gi|326483936|gb|EGE07946.1| peptidyl-prolyl cis-trans isomerase-like 4 [Trichophyton equinum
CBS 127.97]
Length = 454
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G+++S V+RD TG S +Y F+E++
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGRILSCEVIRDKKTGDSLQYAFIEFED 298
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+K C A + I VDF
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDF 323
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
T+ LF+ L+ + E L AF +G+++ V+V+ D ++ SK Y F+EY E+A AA+
Sbjct: 296 TKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAAL 355
Query: 150 RALNRQNFQGSEIIVD 165
+ +N + G I+VD
Sbjct: 356 KEMNGKIINGWMIVVD 371
>gi|320169942|gb|EFW46841.1| hypothetical protein CAOG_04799 [Capsaspora owczarzaki ATCC 30864]
Length = 313
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
TL + L+ +READLE FA +GKV+ VVRD T S+ + F+ + E+ AAIR
Sbjct: 59 TLCVIGLSPLTREADLESKFARFGKVVRCDVVRDPHTNDSRGFAFIGMENEEQAHAAIRG 118
Query: 152 LNRQNFQGSEIIVD 165
+R F G I V+
Sbjct: 119 CHRTEFDGRTISVE 132
>gi|217966813|ref|YP_002352319.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
gi|217335912|gb|ACK41705.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
Length = 92
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
++TL++G L ++ E +L+ FA +G V S R++ D TG SK +GF+E D EK I
Sbjct: 2 SKTLYVGNLPWSTTEEELKNIFASHGTVYSARIISDRNTGRSKGFGFVEVD-EKEAEKMI 60
Query: 150 RALNRQNFQGSEIIVD 165
ALN +G IIV+
Sbjct: 61 SALNNTEVKGRRIIVN 76
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LF+G L + L+ AF ++G VI V++D TG S+ +GF+ + E AI AL
Sbjct: 10 LFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEAL 69
Query: 153 NRQNFQGSEIIVDF 166
N Q G EI V++
Sbjct: 70 NGQELDGREIRVNY 83
>gi|254584676|ref|XP_002497906.1| ZYRO0F16214p [Zygosaccharomyces rouxii]
gi|238940799|emb|CAR28973.1| ZYRO0F16214p [Zygosaccharomyces rouxii]
Length = 330
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
R LFI +LN +R D+ F +G + SV +VRD TGHS YGF+++ K+C A +
Sbjct: 242 RVLFICKLNPLTRAKDIATIFQRFGAIASVEIVRDKSTGHSLGYGFIQFTDRKSCEQAYK 301
Query: 151 ALNRQNFQGSEIIVDF 166
+ I VDF
Sbjct: 302 KMEGVIIDDRRIHVDF 317
>gi|256070357|ref|XP_002571509.1| hypothetical protein [Schistosoma mansoni]
Length = 404
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 45 WYPYCITY---DPIQAGSIDGTDTIPHDRAILRALRSTYK 81
W+PY Y DP+ GSIDGTDT PHDRAI RAL S+YK
Sbjct: 13 WHPYVHQYGYYDPVTVGSIDGTDTTPHDRAIQRALTSSYK 52
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 46/174 (26%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAE----------------YGKVIS------- 119
H + T T+F+GRL ++ + L++A E Y + S
Sbjct: 218 HGPNNSSTATIFVGRLPYHTSKICLQKALHELLNKHLGNDLNKKSRKYCRSRSPFSCDEI 277
Query: 120 ---VRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF------------------- 157
+ +V + VTG+ Y F + E +RA Q
Sbjct: 278 WPKIHIVHNIVTGYPCGYAFAYFSSESDAERVLRAWRNQTTVSTKLHCGLKDERHCGLDI 337
Query: 158 -QGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMN 210
G ++I++ G LPGW+PRRLGGG GG + +GQLRFGG +P+ +P + N
Sbjct: 338 PNGDKVILEPYFGGTLPGWRPRRLGGGLGGRKEAGQLRFGGIARPFRRPFSVNN 391
>gi|346322586|gb|EGX92185.1| glycine-rich RNA-binding protein [Cordyceps militaris CM01]
Length = 182
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
LFIG L ++ EA L Q F E+G V VV+D TG S+ +GF+ Y + +AI A+
Sbjct: 4 LFIGGLAWHTEEATLRQKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQDADAQSAIAAM 63
Query: 153 NRQNFQGSEIIVD 165
N F G I VD
Sbjct: 64 NNVEFDGRTIRVD 76
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 75 ALRSTYKPHTSSTDPTRT----LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGH 130
+LR P PTRT LF+ L+ + E L+ AF+ YGKV+ VR++ + T
Sbjct: 68 SLRFRPLPVACLPPPTRTRNNKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRR 127
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
SK +GF+E+ E+ A++ +N + G I VD
Sbjct: 128 SKGFGFVEFSTEEEANTALKEMNGKILNGWLISVDI 163
>gi|336450816|ref|ZP_08621262.1| RRM domain-containing RNA-binding protein [Idiomarina sp. A28L]
gi|336282072|gb|EGN75310.1| RRM domain-containing RNA-binding protein [Idiomarina sp. A28L]
Length = 163
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 47 PYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKP------HTSSTDPTRTLFIGRLNK 100
P +T I G+ G P+ L ++ K TS RTL++G L
Sbjct: 31 PDRLTVSLIALGTFLGGVVTPYINFYLSQRKTKVKASRPPAKRTSKGTDGRTLYVGNLPF 90
Query: 101 NSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGS 160
E ++E F YG+V VR+V+D TG K YGF+E D A L A+ LN +F+G
Sbjct: 91 KISEEEVENLFGRYGEVTDVRLVKDRRTGRKKGYGFVEMDATGADL-ALAKLNDNDFEGR 149
Query: 161 EIIV 164
+ V
Sbjct: 150 TLKV 153
>gi|429853390|gb|ELA28465.1| RNA-binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 314
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S P+R +F+G + E + F+ GKV++ R+V D TG K +GF EY +
Sbjct: 2 SKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSA 61
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
+A+R LN G ++ VDF
Sbjct: 62 ASAVRNLNDYEIMGRKLRVDF 82
>gi|325092528|gb|EGC45838.1| peptidyl-prolyl cis-trans isomerase [Ajellomyces capsulatus H88]
Length = 392
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN+ +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 191 PFAEVKPPENVLFVCKLNRVTQDEDLHLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 250
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLGGGWGGNRNSGQLRFGG 197
+K C A + I VDF ++ W+ R S Q FGG
Sbjct: 251 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSDSWR-----NATNSKRASQQGGFGG 303
>gi|310800360|gb|EFQ35253.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 314
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S P+R +F+G + E + F+ GKV++ R+V D TG K +GF EY +
Sbjct: 2 SKPPSRVVFVGNIPYGLSEEQISDIFSSAGKVLNFRLVYDRETGRPKGFGFAEYPDNDSA 61
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
+A+R LN G ++ VDF
Sbjct: 62 ASAVRNLNDYEIMGRKLRVDF 82
>gi|195504667|ref|XP_002099177.1| GE10772 [Drosophila yakuba]
gi|194185278|gb|EDW98889.1| GE10772 [Drosophila yakuba]
Length = 655
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN + + DLE F+ +G + V+RD TG S +Y F+E++
Sbjct: 231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEE 290
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGG--RN 199
+K+C AA ++ I VDF W+ G G G + G+L F N
Sbjct: 291 QKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVVGDYGKLDFDNLRDN 346
Query: 200 KPWVKP 205
K KP
Sbjct: 347 KDRRKP 352
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 77 RSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
RS P ++ D +F+G L+ L++ F++YGKV+ RVV D +G S+ +GF
Sbjct: 93 RSERAPRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGF 152
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKP 177
+ Y AAI +L+ F G E+ V+ L G KP
Sbjct: 153 VTYSDVSEVDAAIDSLDGAEFDGRELRVN------LAGNKP 187
>gi|320536463|ref|ZP_08036497.1| RNA-binding protein [Treponema phagedenis F0421]
gi|320146672|gb|EFW38254.1| RNA-binding protein [Treponema phagedenis F0421]
Length = 88
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
++ +++G LN + L+ F YG+V+S V++D +T SK +GF+E + E A AI
Sbjct: 2 SQKIYVGNLNYATTGEGLKDLFGNYGEVVSAIVIKDRLTHRSKGFGFVEMEDEAAVKKAI 61
Query: 150 RALNRQNFQGSEIIVDFECGRVLP 173
LN +F+G +I V++ R P
Sbjct: 62 EELNETDFEGRKIRVNYAEERQQP 85
>gi|313231304|emb|CBY08419.1| unnamed protein product [Oikopleura dioica]
Length = 160
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
++F+G + ++E DL+ F+ +G+V+ R++ D TG S+ GF E+ E +C AAI +
Sbjct: 82 SVFVGNIPWTAQEEDLKDIFSAHGQVVKFRILVDRETGRSRGMGFCEFADESSCQAAIDS 141
Query: 152 LNRQNFQGSEIIVD 165
LN ++ G ++ VD
Sbjct: 142 LNGHDYNGRQLRVD 155
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 4/118 (3%)
Query: 36 SSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFI 95
S SGQ++ Y + + Y ++ S +T+ R + ++ ++ +S L++
Sbjct: 80 SHSGQSLGYGF---VNYQRVEDAS-KAINTLNGLRLQNKQIKVSFARPSSEAIKGANLYV 135
Query: 96 GRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALN 153
L KN +ADLE F+ YG++I+ R++ D +TG SK GF+ +D AI+ LN
Sbjct: 136 SGLPKNMLQADLESLFSPYGRIITSRILCDNITGLSKGVGFIRFDQRVEAEKAIKELN 193
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+ L + E L Q F +G V SV+V++D T K +GF+ + AI++L
Sbjct: 278 IFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDLQTNKCKGFGFVTMTNYDEAVVAIQSL 337
Query: 153 NRQNFQGSEIIVDFECGR 170
N + V F+ +
Sbjct: 338 NGYTLGNRVLQVSFKTNK 355
>gi|358374537|dbj|GAA91128.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Aspergillus
kawachii IFO 4308]
Length = 447
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 82 PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
P P LF+ +LN +++ DL F+ +G ++S V+RD TG S +Y F+E++
Sbjct: 222 PFAEVKPPENVLFVCKLNPVTQDEDLNLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 281
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
+K C A + I VDF ++ W+ +R G GG+GG
Sbjct: 282 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATITKRSGQRGGFGG 334
>gi|339626955|ref|YP_004718598.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|379008663|ref|YP_005258114.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
gi|339284744|gb|AEJ38855.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|361054925|gb|AEW06442.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
Length = 85
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
++TL++G L ++ E +L QAFA++ +VIS R++ D TG S+ +GF+E ++ A+
Sbjct: 2 SKTLYVGNLAWSTTEEELAQAFAQHAQVISARIITDRETGRSRGFGFVEV-ADQDAEQAV 60
Query: 150 RALNRQNFQGSEIIVD 165
A+N G +IIV+
Sbjct: 61 EAMNGTQLGGRDIIVN 76
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 73 LRALRSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSK 132
L+ L+ +Y TSS L++ RL + DL +AF+++G+V+ +++ D TG S+
Sbjct: 221 LKFLKVSYATATSSQSTHANLYVNRLEPQVTKEDLAEAFSKFGEVVETKILVDPNTGSSR 280
Query: 133 RYGFLEYDCEKACLAAIRALNRQNF--QGSEIIVDF 166
GF+ + + L A+ A+N N Q I V F
Sbjct: 281 CVGFVHFSARRNALTALSAMNGANIPCQTGPIYVKF 316
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D L I + K+ DL FA +G+++S +VV + YGF++Y + A
Sbjct: 150 DALTNLIINNIPKHFSSEDLRDMFANFGEIVSYKVVTKRGNSKNMGYGFVKYATPEGATA 209
Query: 148 AIRALN 153
AI +N
Sbjct: 210 AIEQMN 215
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+P +++G L+ ++ LEQ F+E+GKV+S RVV D TG S+ +GF+ EK
Sbjct: 203 EPVLRVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMND 262
Query: 148 AIRALNRQNFQGSEIIV 164
AI AL+ Q +G I V
Sbjct: 263 AIAALDGQILEGRTIKV 279
>gi|156102999|ref|XP_001617192.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148806066|gb|EDL47465.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1075
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P LF+ +LN + E DL+ FA +G + S +V+D VT +S +Y F+E++ ++ CL A
Sbjct: 219 PENVLFVCKLNPVTEEEDLKTIFARFGPITSCNIVKDKVTNNSLQYAFIEFEKKEDCLNA 278
Query: 149 IRALNRQNFQGSEIIVDF 166
++ I VDF
Sbjct: 279 YFEMDNVIIDDRRIHVDF 296
>gi|406996166|gb|EKE14624.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 84
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ LF+G L+ + ++ +LE+ F GKVI+ +VR F SK +GF+E + + AI
Sbjct: 3 KKLFVGNLDFDVKDIELEELFKTVGKVITAEIVR-FFDKKSKGFGFVEMETVEEAKTAIE 61
Query: 151 ALNRQNFQGSEIIVD 165
LN F+G +IIVD
Sbjct: 62 KLNDSEFRGRKIIVD 76
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,693,076,696
Number of Sequences: 23463169
Number of extensions: 152131436
Number of successful extensions: 451733
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12982
Number of HSP's successfully gapped in prelim test: 5137
Number of HSP's that attempted gapping in prelim test: 424562
Number of HSP's gapped (non-prelim): 29311
length of query: 225
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 88
effective length of database: 9,144,741,214
effective search space: 804737226832
effective search space used: 804737226832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)