BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy222
         (225 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q05AT9|U1SBP_XENLA U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Xenopus
           laevis GN=snrnp35 PE=2 SV=1
          Length = 272

 Score =  160 bits (405), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 1/165 (0%)

Query: 45  WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
           W P    YDP++AGSIDGTD  PHDRA+LRA+ S Y P+   T DP  TLF+ RL+  + 
Sbjct: 4   WTPIAKKYDPLKAGSIDGTDEEPHDRAVLRAMLSRYVPNKGVTGDPHLTLFVSRLSPQTT 63

Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
           E  L++ F+ YG +  +R+VRDF+TG SK Y F+EY  E A + A R  N+      E+ 
Sbjct: 64  EEKLKEVFSRYGDIKRIRLVRDFITGFSKGYAFIEYKQENAIMKAHRDANKLVIDQREVF 123

Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
           VDFE  R L GW PRR GGG+GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDFELERNLKGWIPRRFGGGFGGKKESGQLRFGGRDRPFRKPINL 168


>sp|Q4KMD3|U1SBP_DANRE U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Danio
           rerio GN=snrnp35 PE=2 SV=1
          Length = 208

 Score =  159 bits (402), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/169 (49%), Positives = 109/169 (64%), Gaps = 1/169 (0%)

Query: 45  WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
           W P    YDP++AGSIDGTD  PHD  + RA+ + YKP+     DP  TLF+ RLN  + 
Sbjct: 3   WSPVAKVYDPLKAGSIDGTDVEPHDAGVWRAMLARYKPNRGVCGDPDLTLFVARLNPQTT 62

Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
           E  L   F+++G +  +R+VRD VTG SKRY F+EY  E++   A R  N+      E++
Sbjct: 63  EEKLRDVFSKFGDIRRLRLVRDVVTGFSKRYAFIEYKEERSLKRAWRDANKLILDQYELL 122

Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQLMNER 212
           VD E  R LPGW+PRRLGGG GG + SGQLRFGGR++P+ KP+ L   R
Sbjct: 123 VDVEQERTLPGWRPRRLGGGQGGQKESGQLRFGGRDRPFRKPINLSTRR 171


>sp|Q5U1W5|U1SBP_RAT U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Rattus
           norvegicus GN=Snrnp35 PE=2 SV=1
          Length = 244

 Score =  154 bits (389), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 109/165 (66%), Gaps = 1/165 (0%)

Query: 45  WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
           W P    YDP++AGSIDGTD  PHDRA+ RA+ + Y P+   T DP  TLF+ RLN  ++
Sbjct: 4   WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNSQTK 63

Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
           E  L++ F+ YG +  +R+VRD VTG SK Y F+EY  E+A L A R  +       EI 
Sbjct: 64  EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIF 123

Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
           VD+E  R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168


>sp|Q1LZH0|U1SBP_BOVIN U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Bos
           taurus GN=SNRNP35 PE=2 SV=1
          Length = 245

 Score =  154 bits (389), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)

Query: 45  WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
           W P    YDP++AGSIDGTD  PHDRA+ RA+ + Y P+   T DP  TLF+ RLN  ++
Sbjct: 4   WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYTPNKGVTGDPLLTLFVARLNLQTK 63

Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
           E  L++ F+ YG +  +R+VRD VTG SK Y F+EY  E++ L A R  +       EI 
Sbjct: 64  EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIF 123

Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
           VD+E  R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168


>sp|Q9D384|U1SBP_MOUSE U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Mus
           musculus GN=Snrnp35 PE=2 SV=1
          Length = 244

 Score =  153 bits (386), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 109/165 (66%), Gaps = 1/165 (0%)

Query: 45  WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
           W P    YDP++AGSIDGTD  PHDRA+ RA+ + Y P+   T DP  TLF+ RLN  ++
Sbjct: 4   WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVTGDPLLTLFVARLNLQTK 63

Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
           E  L++ F+ YG +  +R+VRD VTG SK Y F+EY  E+A + A R  +       EI 
Sbjct: 64  EEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHEIF 123

Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
           VD+E  R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLRGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168


>sp|Q16560|U1SBP_HUMAN U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo
           sapiens GN=SNRNP35 PE=1 SV=1
          Length = 246

 Score =  151 bits (382), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 1/165 (0%)

Query: 45  WYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSST-DPTRTLFIGRLNKNSR 103
           W P    YDP++AGSIDGTD  PHDRA+ RA+ + Y P+     DP  TLF+ RLN  ++
Sbjct: 4   WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTK 63

Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
           E  L++ F+ YG +  +R+VRD VTG SK Y F+EY  E+A + A R  +       EI 
Sbjct: 64  EDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIF 123

Query: 164 VDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
           VD+E  R L GW PRRLGGG GG + SGQLRFGGR++P+ KP+ L
Sbjct: 124 VDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINL 168


>sp|Q42404|RU17_ARATH U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana
           GN=RNU1 PE=1 SV=1
          Length = 427

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 66/118 (55%)

Query: 84  TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
            ++ DP +TLF+ RLN  S E+ +++ F  YG +  V +V D +T   K Y F+EY   +
Sbjct: 131 NATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTR 190

Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
              AA +  + Q   G  ++VD E GR +P W+PRRLGGG G +R  G     G  +P
Sbjct: 191 DMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQP 248


>sp|O13829|RU17_SCHPO U1 small nuclear ribonucleoprotein 70 kDa homolog
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=usp101 PE=1 SV=1
          Length = 261

 Score = 78.6 bits (192), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 57/92 (61%)

Query: 88  DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
           DP +T+F+ RL+ +++E+D+E+ F  YG +  +RVVR+ VTG S  Y F+ ++ E+    
Sbjct: 97  DPYKTMFLSRLSYDTKESDIEREFTRYGPIERIRVVRNKVTGKSMGYAFVVFERERDLKV 156

Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
           A +A       G  I+VD E GR + GW PR+
Sbjct: 157 AYKASAGLMLNGRRIVVDVERGRTVKGWLPRK 188


>sp|Q55FQ0|RU17_DICDI U1 small nuclear ribonucleoprotein 70 kDa OS=Dictyostelium
           discoideum GN=snrnp70 PE=3 SV=1
          Length = 459

 Score = 74.3 bits (181), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)

Query: 68  HDRAILRALRS--TYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD 125
           +D  I ++L++   Y    ++ DP +T+F+ R++  + +  LE  F ++G + S+ +V+D
Sbjct: 74  NDERISKSLKAWDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLFLVKD 133

Query: 126 FVTGHSKR-YGFLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGW 184
                    Y F+E++ E+   AA +  +        I+VD E GRV+  WKPR+ GGG 
Sbjct: 134 SNNPEKHTGYAFIEFERERDMKAAYKQADGMKIDDRRIVVDIERGRVIKNWKPRKFGGGL 193

Query: 185 GGNRNSG 191
           G  R  G
Sbjct: 194 GNTRAGG 200


>sp|P17133|RU17_DROME U1 small nuclear ribonucleoprotein 70 kDa OS=Drosophila
           melanogaster GN=snRNP-U1-70K PE=1 SV=2
          Length = 448

 Score = 68.6 bits (166), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%)

Query: 84  TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
            ++ DP RTLFI R+N ++ E+ L + F  YG +  + ++ D  +G  K Y F+EY+ E+
Sbjct: 95  NATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHER 154

Query: 144 ACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
              AA +  + +      ++VD E  R + GW PR
Sbjct: 155 DMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPR 189


>sp|Q00916|RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=SNP1 PE=1
           SV=1
          Length = 300

 Score = 65.9 bits (159), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 7/101 (6%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           PH   TDP RT+FIGRL  +  E +L++ F ++G++  +R+V+D +T  SK Y F+ +  
Sbjct: 98  PHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKD 157

Query: 142 EKACLAAIRALNRQNFQGSEI-----IVDFECGRVLPGWKP 177
             +   A + +     +G +I     IVD E GR +  +KP
Sbjct: 158 PISSKMAFKEIGVH--RGIQIKDRICIVDIERGRTVKYFKP 196


>sp|P33240|CSTF2_HUMAN Cleavage stimulation factor subunit 2 OS=Homo sapiens GN=CSTF2 PE=1
           SV=1
          Length = 577

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 91  RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           R++F+G +   + E  L+  F+E G V+S R+V D  TG  K YGF EY  ++  L+A+R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 151 ALNRQNFQGSEIIVD 165
            LN + F G  + VD
Sbjct: 76  NLNGREFSGRALRVD 90


>sp|Q8HXM1|CSTF2_BOVIN Cleavage stimulation factor subunit 2 OS=Bos taurus GN=CSTF2 PE=2
           SV=1
          Length = 572

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 91  RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           R++F+G +   + E  L+  F+E G V+S R+V D  TG  K YGF EY  ++  L+A+R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 151 ALNRQNFQGSEIIVD 165
            LN + F G  + VD
Sbjct: 76  NLNGREFSGRALRVD 90


>sp|Q5RDA3|CSTF2_PONAB Cleavage stimulation factor subunit 2 OS=Pongo abelii GN=CSTF2 PE=2
           SV=1
          Length = 577

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 91  RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           R++F+G +   + E  L+  F+E G V+S R+V D  TG  K YGF EY  ++  L+A+R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 151 ALNRQNFQGSEIIVD 165
            LN + F G  + VD
Sbjct: 76  NLNGREFSGRALRVD 90


>sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus
           GN=Cstf2t PE=1 SV=2
          Length = 632

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 91  RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           R++F+G +   + E  L+  F+E G V+S R+V D  TG  K YGF EY  ++  L+A+R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 151 ALNRQNFQGSEIIVD 165
            LN + F G  + VD
Sbjct: 76  NLNGREFSGRALRVD 90


>sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens
           GN=CSTF2T PE=1 SV=1
          Length = 616

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 91  RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           R++F+G +   + E  L+  F+E G V+S R+V D  TG  K YGF EY  ++  L+A+R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 151 ALNRQNFQGSEIIVD 165
            LN + F G  + VD
Sbjct: 76  NLNGREFSGRALRVD 90


>sp|Q8BIQ5|CSTF2_MOUSE Cleavage stimulation factor subunit 2 OS=Mus musculus GN=Cstf2 PE=1
           SV=2
          Length = 580

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 91  RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           R++F+G +   + E  L+  F+E G V+S R+V D  TG  K YGF EY  ++  L+A+R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 151 ALNRQNFQGSEIIVD 165
            LN + F G  + VD
Sbjct: 76  NLNGREFSGRALRVD 90


>sp|Q871A4|PPIL4_NEUCR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neurospora crassa
           (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
           / FGSC 987) GN=cyp-6 PE=3 SV=1
          Length = 494

 Score = 62.0 bits (149), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  + + DLE  F+ +GK++S  V+RD  TG S +Y F+E++ 
Sbjct: 244 PFAEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDSLQYAFIEFED 303

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
           +K+C  A   ++        I VDF
Sbjct: 304 KKSCEEAYSKMDSVLIDDRRIHVDF 328


>sp|Q4IE79|PPIL4_GIBZE Peptidyl-prolyl cis-trans isomerase-like 4 OS=Gibberella zeae
           (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084)
           GN=CYP6 PE=3 SV=2
          Length = 485

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  + + DLE  F  +GK++S  V+RD  TG S +Y F+EY+ 
Sbjct: 242 PFAEVKPPENVLFVCKLNPVTGDEDLELIFGRFGKILSCEVIRDQKTGDSLQYAFIEYED 301

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLG---GGWGG 186
           + +C AA   +         I VDF     ++   W+      RR     GGWGG
Sbjct: 302 KASCEAAYFKMQGVLIDDRRIHVDFSQSVSKLSDVWRKDTNSKRRTNAGRGGWGG 356


>sp|Q5ARI5|PPIL4_EMENI Peptidyl-prolyl cis-trans isomerase-like 4 OS=Emericella nidulans
           (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
           M139) GN=cyp6 PE=3 SV=1
          Length = 461

 Score = 60.8 bits (146), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  +++ DLE  F+ +GK++S  V+RD  TG S +Y F+E++ 
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDSLQYAFIEFES 298

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWKPRRLG------GGWGG 186
           +K C  A   +         I VDF     ++   W+   +       GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRDATVKKRSAQRGGFGG 351


>sp|Q9UUE4|PPIL4_SCHPO Peptidyl-prolyl cis-trans isomerase cyp6 OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=cyp6 PE=1 SV=1
          Length = 432

 Score = 60.5 bits (145), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  +++ DLE  F+ +GK+IS +V+RD  TG S +Y F+E+D 
Sbjct: 235 PFAHVAPPENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDSLQYAFIEFDN 294

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
           +++   A   +       S I VDF
Sbjct: 295 KESVEKAYFKMQNVLIDDSRIHVDF 319


>sp|P0C196|PPIL4_USTMA Peptidyl-prolyl cis-trans isomerase-like 4 OS=Ustilago maydis
           (strain 521 / FGSC 9021) GN=CYP6 PE=3 SV=1
          Length = 551

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 7/103 (6%)

Query: 89  PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
           P   LF+ +LN  +R  DLE  F+ +GK++S  V++D  TG S +Y F+E+D +     A
Sbjct: 260 PENILFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERA 319

Query: 149 IRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSG 191
              +         I VDF            RL G W   RN+G
Sbjct: 320 YFKMQNVLVDDRRIWVDF-------SQSVSRLHGDWVKKRNAG 355


>sp|Q66II8|RU17_XENTR U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis
           GN=snrnp70 PE=2 SV=1
          Length = 471

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 82  PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLE 138
           PH       D  +TLF+ R+N ++ E+ L + F  YG +  + +V +  +G  + Y F+E
Sbjct: 91  PHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIE 150

Query: 139 YDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
           Y+ E+   +A +  + +   G  ++VD E GR + GW+PR
Sbjct: 151 YEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190


>sp|P08621|RU17_HUMAN U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens
           GN=SNRNP70 PE=1 SV=2
          Length = 437

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 79  TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
            + PH       D  +TLF+ R+N ++ E+ L + F  YG +  + +V    +G  + Y 
Sbjct: 88  MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147

Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
           F+EY+ E+   +A +  + +   G  ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190


>sp|Q62376|RU17_MOUSE U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus
           GN=Snrnp70 PE=1 SV=2
          Length = 448

 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 79  TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
            + PH       D  +TLF+ R+N ++ E+ L + F  YG +  + +V    +G  + Y 
Sbjct: 88  MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147

Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
           F+EY+ E+   +A +  + +   G  ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190


>sp|Q1RMR2|RU17_BOVIN U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus GN=SNRNP70
           PE=2 SV=1
          Length = 439

 Score = 58.9 bits (141), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 79  TYKPHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYG 135
            + PH       D  +TLF+ R+N ++ E+ L + F  YG +  + +V    +G  + Y 
Sbjct: 88  MWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYA 147

Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
           F+EY+ E+   +A +  + +   G  ++VD E GR + GW+PR
Sbjct: 148 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 190


>sp|Q4WAQ9|PPIL4_ASPFU Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neosartorya fumigata
           (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
           GN=cyp6 PE=3 SV=1
          Length = 459

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  +++ DL+  F+ +G ++S  V+RD  TG S +Y F+E++ 
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDSLQYAFIEFEN 298

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK-----PRRLGGGWGG 186
           +K C  A   +         I VDF     ++   W+      R   GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSQRGGFGG 350


>sp|Q9LEB3|RBP47_NICPL Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia
           GN=RBP47 PE=1 SV=1
          Length = 428

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 46/69 (66%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           SS++  +T++IG L +   E+ L   F++ G+VISV+++R+  TG S+RYGF+E++   A
Sbjct: 78  SSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAA 137

Query: 145 CLAAIRALN 153
               +++ N
Sbjct: 138 AEKVLQSYN 146



 Score = 37.4 bits (85), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 92  TLFIGRLNKNSREADLEQAFAE-YGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
           ++F+G L  +  +  L   FA  Y  +   +VV D  TGHSK YGF+ +  E     A+ 
Sbjct: 178 SIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMT 237

Query: 151 ALN 153
            +N
Sbjct: 238 EMN 240



 Score = 35.8 bits (81), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 6/76 (7%)

Query: 78  STYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFL 137
           +T+   +       T+F+G L+    + +L Q+F ++G+V+SV++         K  GF+
Sbjct: 282 ATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPA------GKGCGFV 335

Query: 138 EYDCEKACLAAIRALN 153
           ++    +   AI+ L+
Sbjct: 336 QFSDRSSAQEAIQKLS 351


>sp|Q2U256|PPIL4_ASPOR Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae
           (strain ATCC 42149 / RIB 40) GN=cyp6 PE=3 SV=1
          Length = 461

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 8/113 (7%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  +++ DL   F+ +G ++S  V+RD  TG S +Y F+E++ 
Sbjct: 239 PFAEVKPPENVLFVCKLNPVTQDEDLHLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFEN 298

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF--ECGRVLPGWK----PRRLG--GGWGG 186
           +K C  A   +         I VDF     ++   W+     +R G  GG+GG
Sbjct: 299 QKDCEQAYFKMQGVLIDDHRIHVDFSQSVSKLSESWRNATISKRSGQRGGFGG 351


>sp|P0CP88|PPIL4_CRYNJ Peptidyl-prolyl cis-trans isomerase-like 4 OS=Cryptococcus
           neoformans var. neoformans serotype D (strain JEC21 /
           ATCC MYA-565) GN=CYP6 PE=3 SV=1
          Length = 504

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P  +   P   LF+ +LN  +++ DLE  F+ +GK++S  VVRD  +G S +Y F+E+D 
Sbjct: 237 PFAAVRPPENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDE 296

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
            +A   A   +         I VDF
Sbjct: 297 REAAEQAYFKMQNVLVDDRRIWVDF 321


>sp|P0CP89|PPIL4_CRYNB Peptidyl-prolyl cis-trans isomerase-like 4 OS=Cryptococcus
           neoformans var. neoformans serotype D (strain B-3501A)
           GN=CYP6 PE=3 SV=1
          Length = 504

 Score = 56.6 bits (135), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P  +   P   LF+ +LN  +++ DLE  F+ +GK++S  VVRD  +G S +Y F+E+D 
Sbjct: 237 PFAAVRPPENILFVCKLNPVTQDEDLELIFSRFGKILSCEVVRDKKSGDSLQYAFIEFDE 296

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
            +A   A   +         I VDF
Sbjct: 297 REAAEQAYFKMQNVLVDDRRIWVDF 321


>sp|Q61701|ELAV4_MOUSE ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1
          Length = 385

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 88  TGQSLGYGFVNYI--DPKDAE--KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 143

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 144 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 203

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 204 SGATEPITVKF 214



 Score = 47.0 bits (110), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 85  SSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
           ++TD ++T L +  L +N  + +    F   G++ S ++VRD +TG S  YGF+ Y   K
Sbjct: 44  AATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 103

Query: 144 ACLAAIRALNRQNFQGSEIIVDF 166
               AI  LN    Q   I V +
Sbjct: 104 DAEKAINTLNGLRLQTKTIKVSY 126



 Score = 43.9 bits (102), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L+ +S E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363

Query: 153 N 153
           N
Sbjct: 364 N 364


>sp|Q91903|ELAV2_XENLA ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2
          Length = 389

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 6/134 (4%)

Query: 35  KSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLF 94
           K + GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L+
Sbjct: 101 KITEGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLY 156

Query: 95  IGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNR 154
           +  L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN 
Sbjct: 157 VSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNG 216

Query: 155 QNFQGSE--IIVDF 166
           Q   G+   I V F
Sbjct: 217 QKPPGATEPITVKF 230



 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L  ++ E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 367

Query: 153 N 153
           N
Sbjct: 368 N 368


>sp|O09032|ELAV4_RAT ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1
          Length = 373

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 76  TGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 131

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 132 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 191

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 192 SGATEPITVKF 202



 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 85  SSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
           ++TD ++T L +  L +N  + +    F   G++ S ++VRD +TG S  YGF+ Y   K
Sbjct: 32  AATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 91

Query: 144 ACLAAIRALNRQNFQGSEIIVDF 166
               AI  LN    Q   I V +
Sbjct: 92  DAEKAINTLNGLRLQTKTIKVSY 114



 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L+ +S E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351

Query: 153 N 153
           N
Sbjct: 352 N 352


>sp|A4QNI8|ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1
          Length = 400

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)

Query: 39  GQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRL 98
           GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  L
Sbjct: 118 GQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 173

Query: 99  NKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQ 158
            K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q   
Sbjct: 174 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPS 233

Query: 159 GSE--IIVDF 166
           G+   I V F
Sbjct: 234 GAAEPITVKF 243



 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L+ +S E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 319 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 378

Query: 153 N 153
           N
Sbjct: 379 N 379


>sp|Q7SZT7|ELAV4_XENLA ELAV-like protein 4 OS=Xenopus laevis GN=elavl4 PE=2 SV=1
          Length = 400

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 6/130 (4%)

Query: 39  GQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRL 98
           GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  L
Sbjct: 118 GQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGL 173

Query: 99  NKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQ 158
            K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q   
Sbjct: 174 PKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPS 233

Query: 159 GSE--IIVDF 166
           G+   I V F
Sbjct: 234 GAAEPITVKF 243



 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L+ +S E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 319 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 378

Query: 153 N 153
           N
Sbjct: 379 N 379


>sp|Q9FNR1|RBG3_ARATH Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis
           thaliana GN=RBG3 PE=2 SV=1
          Length = 309

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 47/79 (59%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           LFIG +  +  E  L +AF +YG+V+  RV+ D  TG S+ +GF+ +   +A  +AI+AL
Sbjct: 42  LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101

Query: 153 NRQNFQGSEIIVDFECGRV 171
           + ++  G  + V++   R 
Sbjct: 102 DGRDLHGRVVKVNYANDRT 120


>sp|P26378|ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2
          Length = 380

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 83  TGQSLGYGFVNYI--DPKDAE--KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 138

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 139 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 198

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 199 SGATEPITVKF 209



 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 85  SSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
           ++TD ++T L +  L +N  + +    F   G++ S ++VRD +TG S  YGF+ Y   K
Sbjct: 39  ATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 98

Query: 144 ACLAAIRALNRQNFQGSEIIVDF 166
               AI  LN    Q   I V +
Sbjct: 99  DAEKAINTLNGLRLQTKTIKVSY 121



 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L+ +S E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358

Query: 153 N 153
           N
Sbjct: 359 N 359


>sp|Q03250|RBG7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=RBG7
           PE=1 SV=1
          Length = 176

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 45/81 (55%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           +S D     F+G L   + +  LE AFA+YG VI  +++ D  TG S+ +GF+ +  EKA
Sbjct: 2   ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKA 61

Query: 145 CLAAIRALNRQNFQGSEIIVD 165
              AI  +N Q+  G  I V+
Sbjct: 62  MKDAIEGMNGQDLDGRSITVN 82


>sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2
           SV=1
          Length = 168

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           ++ D     F+G L   +    LEQAFA +G+VI  +V+ D  TG S+ +GF+ +  E++
Sbjct: 2   AAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQS 61

Query: 145 CLAAIRALNRQNFQGSEIIVD 165
            L AI  +N +   G  I V+
Sbjct: 62  MLDAIENMNGKELDGRNITVN 82


>sp|Q9CXG3|PPIL4_MOUSE Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4
           PE=2 SV=2
          Length = 492

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  + + DLE  F+ +G + S  V+RD+ TG S  Y F+E++ 
Sbjct: 231 PDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEK 290

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
           E+ C  A   ++        I VDF
Sbjct: 291 EEDCEKAFFKMDNVLIDDRRIHVDF 315


>sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1
          Length = 359

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 76  TGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 131

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 132 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP 191

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 192 PGATEPITVKF 202



 Score = 44.3 bits (103), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           ++ D    L    L +N  + +L+  F   G++ S ++VRD +TG S  YGF+ Y   K 
Sbjct: 33  NTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92

Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
              AI  LN    Q   I V +
Sbjct: 93  AEKAINTLNGLRLQTKTIKVSY 114



 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L  ++ E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337

Query: 153 N 153
           N
Sbjct: 338 N 338


>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1
          Length = 360

 Score = 55.5 bits (132), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 76  TGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 131

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 132 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP 191

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 192 PGATEPITVKF 202



 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           ++ D    L +  L +N  + +L+  F   G++ S ++VRD +TG S  YGF+ Y   K 
Sbjct: 33  NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92

Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
              AI  LN    Q   I V +
Sbjct: 93  AEKAINTLNGLRLQTKTIKVSY 114



 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L  ++ E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338

Query: 153 N 153
           N
Sbjct: 339 N 339


>sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1
          Length = 359

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 76  TGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 131

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 132 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP 191

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 192 PGATEPITVKF 202



 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           ++ D    L +  L +N  + +L+  F   G++ S ++VRD +TG S  YGF+ Y   K 
Sbjct: 33  NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92

Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
              AI  LN    Q   I V +
Sbjct: 93  AEKAINTLNGLRLQTKTIKVSY 114



 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L  ++ E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337

Query: 153 N 153
           N
Sbjct: 338 N 338


>sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2
          Length = 359

 Score = 55.1 bits (131), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 76  TGQSLGYGFVNYI--DPKDAEK--AINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 131

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 132 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKP 191

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 192 PGATEPITVKF 202



 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 85  SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
           ++ D    L +  L +N  + +L+  F   G++ S ++VRD +TG S  YGF+ Y   K 
Sbjct: 33  NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92

Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
              AI  LN    Q   I V +
Sbjct: 93  AEKAINTLNGLRLQTKTIKVSY 114



 Score = 42.7 bits (99), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L  ++ E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337

Query: 153 N 153
           N
Sbjct: 338 N 338


>sp|Q28GD4|ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2
          Length = 375

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)

Query: 38  SGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGR 97
           +GQ++ Y +   I  DP  A      +T+   R   + ++ +Y   +S++     L++  
Sbjct: 104 TGQSLGYGFVNYI--DPKDAE--KAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSG 159

Query: 98  LNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNF 157
           L K   + +LEQ F++YG++I+ R++ D VTG S+  GF+ +D       AI+ LN Q  
Sbjct: 160 LPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKP 219

Query: 158 QGSE--IIVDF 166
            G+   I V F
Sbjct: 220 PGATEPITVKF 230



 Score = 48.1 bits (113), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 83  HTSSTDPTRT-LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
            +S+T+ ++T L +  L +N  + +L+  F   G++ S ++VRD +TG S  YGF+ Y  
Sbjct: 58  ESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 117

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
            K    AI  LN    Q   I V +
Sbjct: 118 PKDAEKAINTLNGLRLQTKTIKVSY 142



 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           +F+  L  ++ E+ L Q F  +G V +V+V+RDF T   K +GF+          AI +L
Sbjct: 294 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 353

Query: 153 N 153
           N
Sbjct: 354 N 354


>sp|Q8WUA2|PPIL4_HUMAN Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4
           PE=1 SV=1
          Length = 492

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%)

Query: 82  PHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
           P      P   LF+ +LN  + + DLE  F+ +G + S  V+RD+ TG S  Y F+E++ 
Sbjct: 231 PDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEK 290

Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
           E+ C  A   ++        I VDF
Sbjct: 291 EEDCEKAFFKMDNVLIDDRRIHVDF 315


>sp|Q8VE97|SRSF4_MOUSE Serine/arginine-rich splicing factor 4 OS=Mus musculus GN=Srsf4
           PE=2 SV=1
          Length = 489

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 16/108 (14%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           ++IGRL+  +RE D+E+ F  YGK++ V    D   G    YGF+E+D  +    A+  L
Sbjct: 4   VYIGRLSYQARERDVERFFKGYGKILEV----DLKNG----YGFVEFDDLRDADDAVYEL 55

Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNK 200
           N ++  G  +IV+   G       PRR  G +G  R+    R  GR+K
Sbjct: 56  NGKDLCGERVIVEHARG-------PRR-DGSYGSGRSGYGYRRSGRDK 95


>sp|P09406|RU17_XENLA U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis
           GN=snrnp70 PE=2 SV=1
          Length = 471

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)

Query: 82  PHTSST---DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRD---FVTGHSKRYG 135
           PH       D  +TLF+ R+N ++ E+ L + F  YG +  + +V +     +G  + Y 
Sbjct: 91  PHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGSGKPRGYA 150

Query: 136 FLEYDCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPR 178
           F+EY+ E+   +A +  + +   G  ++VD E GR + GW+PR
Sbjct: 151 FIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPR 193


>sp|Q4V898|RBMX_RAT RNA-binding motif protein, X chromosome OS=Rattus norvegicus
           GN=Rbmx PE=1 SV=1
          Length = 390

 Score = 55.1 bits (131), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 93  LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
           LFIG LN  + E  LE  F +YG+++ V +++D  T  S+ + F+ ++       A R +
Sbjct: 10  LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69

Query: 153 NRQNFQGSEIIVD------FECGR 170
           N ++  G  I V+      FE GR
Sbjct: 70  NGKSLDGKAIKVEQATKPSFESGR 93


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.133    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,364,622
Number of Sequences: 539616
Number of extensions: 3604563
Number of successful extensions: 11976
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 10762
Number of HSP's gapped (non-prelim): 1252
length of query: 225
length of database: 191,569,459
effective HSP length: 113
effective length of query: 112
effective length of database: 130,592,851
effective search space: 14626399312
effective search space used: 14626399312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)