RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy222
(225 letters)
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 67.6 bits (165), Expect = 7e-16
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+L++G L+ + EA L + F+ G ++S+RV RD +T S Y ++ + A+
Sbjct: 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 61
Query: 152 LNRQNFQGSEIIVDF 166
+N +G + + +
Sbjct: 62 MNFDVIKGKPVRIMW 76
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 94
Score = 65.3 bits (159), Expect = 9e-15
Identities = 13/81 (16%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDF-VTGHSKRYGFLEYDCEKACL 146
T + + + + + ++ + F+ +G++ +VR+ + TG + +GF+++ ++
Sbjct: 6 QTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAK 65
Query: 147 AAIRAL-NRQNFQGSEIIVDF 166
A AL + + G +++++
Sbjct: 66 KAFNALCHSTHLYGRRLVLEW 86
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila
melanogaster [TaxId: 7227]}
Length = 85
Score = 64.6 bits (157), Expect = 1e-14
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
L++ L + + L+ F +YG ++ ++RD +TG + F+ Y+ + AI
Sbjct: 7 TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 66
Query: 151 ALNRQNFQGSE--IIVDF 166
ALN +G + V
Sbjct: 67 ALNNVIPEGGSQPLSVRL 84
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 64.7 bits (157), Expect = 2e-14
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
S + T+++G L++ E L + F + G V++ + +D VTG + YGF+E+ E+
Sbjct: 4 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 63
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
AI+ ++ G I V+
Sbjct: 64 ADYAIKIMDMIKLYGKPIRVNK 85
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor
10 {Human (Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 62.8 bits (152), Expect = 6e-14
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
++ DP L + L+ + E DL + F++YG + V +V D + S+ + F+ ++
Sbjct: 4 ANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDD 63
Query: 145 CLAAIRALNRQNFQGSEIIV 164
A N G I V
Sbjct: 64 AKEAKERANGMELDGRRIRV 83
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 62.3 bits (151), Expect = 1e-13
Identities = 17/83 (20%), Positives = 37/83 (44%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ TL++G L+ + E + + F++ G + + + D + + + F+EY
Sbjct: 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAEN 64
Query: 148 AIRALNRQNFQGSEIIVDFECGR 170
A+R +N I D++ G
Sbjct: 65 AMRYINGTRLDDRIIRTDWDAGF 87
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila
melanogaster [TaxId: 7227]}
Length = 82
Score = 61.9 bits (150), Expect = 1e-13
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
L + L ++ + +L F G + + R++RD+ TG+S Y F+++ E AI+
Sbjct: 4 NLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKV 63
Query: 152 LNRQNFQGSEIIVDF 166
LN + + V +
Sbjct: 64 LNGITVRNKRLKVSY 78
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 61.6 bits (149), Expect = 2e-13
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
R L++G L + + L AF +G + +++ D+ T + + F+E++ + AA
Sbjct: 4 TKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAA 63
Query: 149 IRALNRQNFQGSEIIVDF 166
I +N G I V+
Sbjct: 64 IDNMNESELFGRTIRVNL 81
>d1jmta_ d.58.7.3 (A:) U2AF35
(35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 61.2 bits (148), Expect = 5e-13
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+ + E + +YG+V + V + H ++++ E+ A+ L
Sbjct: 30 VEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNL-GDHLVGNVYVKFRREEDAEKAVIDL 88
Query: 153 NRQNFQGSEIIVDF 166
N + F G I +
Sbjct: 89 NNRWFNGQPIHAEL 102
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 85
Score = 59.3 bits (143), Expect = 1e-12
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
S++ L++ L K + +LEQ F++YG++I+ R++ D VTG S+ GF+ +D
Sbjct: 1 SASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIE 60
Query: 145 CLAAIRALNRQNFQGSE--IIVDF 166
AI+ LN Q G+ I V F
Sbjct: 61 AEEAIKGLNGQKPSGATEPITVKF 84
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 78
Score = 59.2 bits (143), Expect = 1e-12
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L + L+ +AD+++ FAE+G + V D +G S + ++ + L A++
Sbjct: 3 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQY 61
Query: 153 NRQNFQGSEIIVDF 166
N G + +
Sbjct: 62 NGVPLDGRPMNIQL 75
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 60.0 bits (145), Expect = 2e-12
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ R L+I L ++ F +YG + +R T ++ ++ Y+
Sbjct: 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIR---VGNTPETRGTAYVVYEDIFDAKN 61
Query: 148 AIRALNRQNFQGSEIIVDF 166
A L+ N ++V +
Sbjct: 62 ACDHLSGFNVCNRYLVVLY 80
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation
factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 59.3 bits (143), Expect = 2e-12
Identities = 18/79 (22%), Positives = 41/79 (51%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D T+ + L++++RE DL++ F +G + + + +D TG SK + F+ + +
Sbjct: 6 DDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAAR 65
Query: 148 AIRALNRQNFQGSEIIVDF 166
AI ++ + + V++
Sbjct: 66 AIAGVSGFGYDHLILNVEW 84
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 102
Score = 58.3 bits (140), Expect = 5e-12
Identities = 15/82 (18%), Positives = 36/82 (43%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+ +P + L++ L+ E DL FA + + + +TG + F+ + ++
Sbjct: 13 NPGEPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEI 72
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
A+ +N G ++++F
Sbjct: 73 AWQALHLVNGYKLYGKILVIEF 94
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 58.2 bits (140), Expect = 6e-12
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 83 HTSSTDPT-RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
H S D T +F+G L ++ +A L + F +G + V+ D TG S+ YGF+
Sbjct: 2 HGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMAD 61
Query: 142 EKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGG 186
A A + N G + V+ G KPR L G+
Sbjct: 62 RAAAERACKDPN-PIIDGRKANVNLAY----LGAKPRSLQTGFAI 101
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens)
[TaxId: 9606]}
Length = 90
Score = 57.4 bits (138), Expect = 7e-12
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
RTL++G L+++ E + Q F++ G S +++ + + Y F+E+ +
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITE--HTSNDPYCFVEFYEHRD 60
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
AA+ A+N + G E+ V++
Sbjct: 61 AAAALAAMNGRKILGKEVKVNW 82
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 82
Score = 57.0 bits (137), Expect = 9e-12
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
L + L +N + + F G++ S ++VRD +TG S YGF+ Y K AI
Sbjct: 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAIN 62
Query: 151 ALNRQNFQGSEIIVDF 166
LN Q I V +
Sbjct: 63 TLNGLRLQTKTIKVSY 78
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 57.3 bits (138), Expect = 9e-12
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 77 RSTYKPHTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGF 136
R + RT+F +L R DLE F+ GKV VR++ D + SK +
Sbjct: 5 REPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAY 64
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
+E+ ++ AI L Q G IIV
Sbjct: 65 VEFCEIQSVPLAI-GLTGQRLLGVPIIVQA 93
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human
(Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 56.9 bits (137), Expect = 1e-11
Identities = 21/76 (27%), Positives = 33/76 (43%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
LFIG L + +++ +G + + +V+D TG SK Y F EY AI
Sbjct: 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIA 61
Query: 151 ALNRQNFQGSEIIVDF 166
LN +++V
Sbjct: 62 GLNGMQLGDKKLLVQR 77
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 85
Score = 57.0 bits (137), Expect = 1e-11
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVV---RDFVTGHSKRYGFLEYDCEKACLAAI 149
LFI LN ++ E L+ F++ G + S + S +GF+EY + A+
Sbjct: 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 60
Query: 150 RALNRQNFQGSEIIVDF 166
+ L G ++ V
Sbjct: 61 KQLQGHTVDGHKLEVRI 77
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1,
UP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 56.6 bits (136), Expect = 1e-11
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ R LFIG L+ + + L F ++G + V+RD T S+ +GF+ Y + A
Sbjct: 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDA 63
Query: 148 AIRALNRQNFQGSEIIVD 165
A+ A G +
Sbjct: 64 AMNA-RPHKVDGRVVEPK 80
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins
C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 56.8 bits (137), Expect = 2e-11
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 84 TSSTDP---TRTLFIGRLNKNS-READLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY 139
+ TDP +FIG LN +++D+E F++YGK++ V + F F++Y
Sbjct: 6 SGKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGF--------AFVQY 57
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWG 185
E+ AA+ + + G + ++ K R G G
Sbjct: 58 VNERNARAAVAGEDGRMIAGQVLDINLAAEP-----KVNRSGPSSG 98
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 56.5 bits (136), Expect = 2e-11
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ T L + L + E DL++ F+ +G+V+ V+V +D TGHSK +GF+ + +
Sbjct: 4 AVQKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQ 63
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
+ + + G
Sbjct: 64 VKVMSQRH--MIDGRWCDCKL 82
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens)
[TaxId: 9606]}
Length = 96
Score = 56.1 bits (135), Expect = 2e-11
Identities = 14/81 (17%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
S+ T++ G + + + Q F+ +G+++ +RV + Y F+ + ++
Sbjct: 14 SSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK------GYSFVRFSTHESA 67
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
AI ++N +G + +
Sbjct: 68 AHAIVSVNGTTIEGHVVKCYW 88
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 91
Score = 56.2 bits (135), Expect = 2e-11
Identities = 10/79 (12%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEY-GKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
P T++I LN+ ++ +L+++ + + + + + F+ + +
Sbjct: 2 PNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATN 61
Query: 148 AIRALNRQNFQGSEIIVDF 166
A+R++ F + + +
Sbjct: 62 ALRSMQGFPFYDKPMRIQY 80
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 55.8 bits (134), Expect = 3e-11
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 83 HTSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
++ S + L + + R+ DL Q F ++GK++ V ++ + SK +GF+ ++
Sbjct: 4 NSESKSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN--ERGSKGFGFVTFENS 61
Query: 143 KACLAAIRALNRQNFQGSEIIVDF 166
A L+ +G +I V+
Sbjct: 62 ADADRAREKLHGTVVEGRKIEVNN 85
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 77
Score = 55.4 bits (133), Expect = 3e-11
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FIG L+ + + L + F ++G+V V+RD +T S+ +GF+ + + + A
Sbjct: 3 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVL-AQ 61
Query: 153 NRQNFQGSEIIVDF 166
+R I
Sbjct: 62 SRHELDSKTIDPKV 75
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus
auratus) [TaxId: 10036]}
Length = 96
Score = 55.4 bits (133), Expect = 5e-11
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Query: 81 KPHTSS-TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEY 139
P TS RTL L+ N E +L++ F + + + G SK ++E+
Sbjct: 6 DPCTSKKVRAARTLLAKNLSFNITEDELKEVFEDA-----LEIRLVSQDGKSKGIAYIEF 60
Query: 140 DCEKACLAAIRALNRQNFQGSEIIVDF 166
E + G + + +
Sbjct: 61 KSEADAEKNLEEKQGAEIDGRSVSLYY 87
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 86
Score = 53.9 bits (129), Expect = 1e-10
Identities = 8/83 (9%), Positives = 25/83 (30%)
Query: 84 TSSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEK 143
+S + + + ++ F Y + ++ G + ++
Sbjct: 3 SSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRD 62
Query: 144 ACLAAIRALNRQNFQGSEIIVDF 166
AA+ LN + ++ +
Sbjct: 63 EATAAVIDLNDRPIGSRKVKLVL 85
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 53.9 bits (129), Expect = 2e-10
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ L++ L ++ E +E+ F RV + Y F+ + + +
Sbjct: 6 SSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV------KKIRDYAFVHFSNREDAVE 59
Query: 148 AIRALNRQNFQGSEIIVDF 166
A++ALN + GS I V
Sbjct: 60 AMKALNGKVLDGSPIEVTL 78
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 54.3 bits (130), Expect = 2e-10
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
P T F+G L + E +++ F K +G+ E++ + L
Sbjct: 12 KSPPYTAFLGNLPYDVTEESIKEFFRGLNISAVRLPREPSNPERLKGFGYAEFEDLDSLL 71
Query: 147 AAIRALNRQNFQGSEIIVDF 166
+A+ +LN ++ I VD
Sbjct: 72 SAL-SLNEESLGNKRIRVDV 90
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 89
Score = 53.5 bits (128), Expect = 2e-10
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+FI L+K+ L F+ +G ++S +VV D YGF+ ++ ++A AI
Sbjct: 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSK--GYGFVHFETQEAAERAI 65
Query: 150 RALNRQNFQGSEIIVDF 166
+N ++ V
Sbjct: 66 EKMNGMLLNDRKVFVGR 82
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 88
Score = 53.2 bits (127), Expect = 2e-10
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
LF+ +++ ++E ++++ F +YG++ ++ + D TG SK Y +EY+ K LAA
Sbjct: 8 WILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 67
Query: 151 ALNRQNFQGSEIIVDF 166
ALN G I VD+
Sbjct: 68 ALNGAEIMGQTIQVDW 83
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins
A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 53.5 bits (128), Expect = 3e-10
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ R LFIG L+ + E L + ++GK+ V+RD + S+ +GF+ + A
Sbjct: 18 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 77
Query: 148 AIRALNRQNFQGSEIIVDF 166
A+ A + G +
Sbjct: 78 AM-AARPHSIDGRVVEPKR 95
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 53.2 bits (127), Expect = 3e-10
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 6/79 (7%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRV-----VRDFVTGHSKRYGFLEYDCEKAC 145
R L++G + E + F ++ + V K + FLE+
Sbjct: 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDET 61
Query: 146 LAAIRALNRQNFQGSEIIV 164
A+ + FQG + +
Sbjct: 62 TQAMA-FDGIIFQGQSLKI 79
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 53.2 bits (127), Expect = 3e-10
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVV--------RDFVTGHSKRYGFLEYD 140
+++ LN + DL F + G V + D TG K + Y+
Sbjct: 7 DNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYE 66
Query: 141 CEKACLAAIRALNRQNFQGSEIIVDF 166
AA+ + ++FQGS++ V
Sbjct: 67 DPPTAKAAVEWFDGKDFQGSKLKVSL 92
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 83
Score = 52.8 bits (126), Expect = 3e-10
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISV-RVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+FIG L+ E L F+ +G ++ +++RD TG+SK Y F+ + A AAI A
Sbjct: 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 60
Query: 152 LNRQNFQGSEIIVDF 166
+N Q I V +
Sbjct: 61 MNGQYLCNRPITVSY 75
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 51.9 bits (124), Expect = 6e-10
Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G L+ ++ E + + F +G+V S+ + D T + + F+ + E+ +
Sbjct: 2 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK- 60
Query: 153 NRQNFQGSEIIV 164
N S+ +
Sbjct: 61 KYHNVGLSKCEI 72
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0
{Human (Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 51.9 bits (124), Expect = 6e-10
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+FIG L+ ++ + DL+ F+++G+V+ + D +TG S+ +GF+ + ++ +
Sbjct: 2 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM-DQ 60
Query: 153 NRQNFQGSEIIV 164
G I
Sbjct: 61 KEHKLNGKVIDP 72
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 53.9 bits (128), Expect = 1e-09
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ R LFIG L+ + + L F ++G + V+RD T S+ +GF+ Y + A
Sbjct: 4 EQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDA 63
Query: 148 AIRALNRQNFQ 158
A+ A +
Sbjct: 64 AMNARPHKVDG 74
Score = 50.8 bits (120), Expect = 1e-08
Identities = 18/123 (14%), Positives = 42/123 (34%), Gaps = 1/123 (0%)
Query: 44 YWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTRTLFIGRLNKNSR 103
+ Y + A + RA+ + + +F+G + +++
Sbjct: 51 GFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTE 110
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
E L F +YGK+ + ++ D +G + + F+ +D + + G
Sbjct: 111 EHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV-IQKYHTVNGHNCE 169
Query: 164 VDF 166
V
Sbjct: 170 VRK 172
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein
1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 102
Score = 51.6 bits (123), Expect = 1e-09
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
LFI L + + DL Q F +G V+S +V D T SK +GF+ YD + AA
Sbjct: 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 76
Query: 149 IRALNRQNFQGSEIIVDF 166
I+++N + V
Sbjct: 77 IQSMNGFQIGMKRLKVQL 94
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor
PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 81
Score = 50.9 bits (121), Expect = 1e-09
Identities = 8/76 (10%), Positives = 27/76 (35%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
TL++ + + ++ + V + S+R+ +++ ++ +
Sbjct: 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVE 61
Query: 151 ALNRQNFQGSEIIVDF 166
LN +G ++
Sbjct: 62 KLNGLKIEGYTLVTKV 77
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 99
Score = 51.3 bits (122), Expect = 2e-09
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
S + + LF+ L+ S E DLE+ F+ YG + + D +T K + F+ + +
Sbjct: 3 SGSSGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEH 62
Query: 145 CLAAIRALNRQNFQGSEIIVDF 166
+ A ++ Q FQG + V
Sbjct: 63 AVKAYAEVDGQVFQGRMLHVLP 84
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 75
Score = 50.1 bits (119), Expect = 2e-09
Identities = 14/74 (18%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+F+G L+ N+ D++ F ++GKV ++ D T + +GF+ ++ E +
Sbjct: 2 IFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVC-EI 60
Query: 153 NRQNFQGSEIIVDF 166
+ +
Sbjct: 61 HFHEINNKMVECKK 74
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 50.5 bits (120), Expect = 3e-09
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVIS--VRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
LFIG + K + ++ + A+ + + + ++ + F+EY+ +A A
Sbjct: 3 RLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMAR 62
Query: 150 RALNRQNFQ--GSEIIVDF 166
R L Q G +I VD+
Sbjct: 63 RKLMPGRIQLWGHQIAVDW 81
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1,
SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 50.1 bits (119), Expect = 4e-09
Identities = 14/79 (17%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
+ +++G L + R D+E F +YG + + + + F+E++ +
Sbjct: 12 NNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRR---GGPPFAFVEFEDPRDAED 68
Query: 148 AIRALNRQNFQGSEIIVDF 166
A+ + ++ G + V+F
Sbjct: 69 AVYGRDGYDYDGYRLRVEF 87
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1,
UP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 49.7 bits (118), Expect = 5e-09
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
+ +F+G + +++ E L F +YGK+ + ++ D +G + + F+ +D + +
Sbjct: 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV- 61
Query: 151 ALNRQNFQGSEIIVDF 166
G V
Sbjct: 62 IQKYHTVNGHNCEVRK 77
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma
cruzi [TaxId: 5693]}
Length = 139
Score = 50.7 bits (120), Expect = 7e-09
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
D R L + + E L Q F YG + SV++V D T S+ YGF+++ +
Sbjct: 40 DVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQ 99
Query: 148 AIRALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGG 183
AI LN N + V +G G
Sbjct: 100 AIAGLNGFNILNKRLKVALAASGHQRPGIAGAVGDG 135
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing
octamer-binding protein, NonO {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 86
Score = 49.2 bits (117), Expect = 7e-09
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
Query: 91 RTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIR 150
LF+G L + E ++ + F +YGK V K +GF+ + A
Sbjct: 9 SRLFVGNLPPDITEEEMRKLFEKYGKAGEVF------IHKDKGFGFIRLETRTLAEIAKV 62
Query: 151 ALNRQNFQGSEIIVDF 166
L+ +G ++ V F
Sbjct: 63 ELDNMPLRGKQLRVRF 78
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 98
Score = 49.0 bits (116), Expect = 1e-08
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
S +T+FI L+ +S E L + ++G + VRVV T HSK F ++ ++A
Sbjct: 3 SDVTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEA 62
Query: 145 CLAAIRALNRQN------FQGSEIIVDF 166
+ A + + G ++ VD
Sbjct: 63 AQKCLAAASLEAEGGGLKLDGRQLKVDL 90
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 47.8 bits (113), Expect = 3e-08
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
R++F+G + + E L+ F+E G V+S R+V D TG K YGF EY ++ L+A
Sbjct: 7 SLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSA 66
Query: 149 IRALNRQNFQGSEIIVDF 166
+R LN + F G + VD
Sbjct: 67 MRNLNGREFSGRALRVDN 84
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 47.4 bits (112), Expect = 3e-08
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
++D LF+G L+ ++ E LEQ F++YG++ V VV+D T S+ +GF+ ++
Sbjct: 2 ASDE-GKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
A+ A+N ++ G +I VD
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQ 81
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A
{Human (Homo sapiens) [TaxId: 9606]}
Length = 80
Score = 47.0 bits (111), Expect = 4e-08
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
L+IG L+ DL Q F + + Y F++Y + + AI
Sbjct: 3 KLYIGNLSPAVTADDLRQLFGDRKLPL------AGQVLLKSGYAFVDYPDQNWAIRAIET 56
Query: 152 LNRQ-NFQGSEIIVDF 166
L+ + G + VD+
Sbjct: 57 LSGKVELHGKIMEVDY 72
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 47.7 bits (113), Expect = 5e-08
Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+ P + + L L Q F+++G V+ + +++ L+Y +
Sbjct: 2 AGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTK----NNQFQALLQYADPVS 57
Query: 145 CLAAIRALNRQNFQGSEIIVDFE 167
A +L+ QN + + +
Sbjct: 58 AQHAKLSLDGQNIYNACCTLRID 80
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif,
single-stranded-interacting protein 2, RBMS2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 45.1 bits (106), Expect = 1e-07
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
L+I L + + DL + YGK++S + + D T K YGF+++D A A+ AL
Sbjct: 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTAL 60
Query: 153 NRQNFQGSEI 162
Q
Sbjct: 61 KASGVQAQMA 70
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8,
ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 45.5 bits (107), Expect = 2e-07
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 9/90 (10%)
Query: 85 SSTDPTRTLFI--GRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCE 142
+ + T++L + G L L + G V ++ +K Y F Y
Sbjct: 13 TVSYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALL------MPPNKPYSFARYRTT 66
Query: 143 KACLAAIRALN-RQNFQGSEIIVDFECGRV 171
+ A LN ++ + V
Sbjct: 67 EESKRAYVTLNGKEVVDDLGQKITLYLNFV 96
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 99
Score = 44.9 bits (106), Expect = 4e-07
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 104 EADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRALNRQNFQGSEII 163
DL +++G++ + + G + + + I+ L+ + F G +I
Sbjct: 33 REDLRVECSKFGQIRKLLLFDRHPDG----VASVSFRDPEEADYCIQTLDGRWFGGRQIT 88
Query: 164 VDFECGR 170
G
Sbjct: 89 AQAWDGT 95
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 43.9 bits (103), Expect = 6e-07
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
TL++ + L AF+ +G +I + + F+ Y+ ++ A
Sbjct: 4 KGNTLYVYGEDMT--PTLLRGAFSPFGNIIDLS------MDPPRNCAFVTYEKMESADQA 55
Query: 149 IRALNRQNFQGSEIIVDF 166
+ LN + ++ V+
Sbjct: 56 VAELNGTQVESVQLKVNI 73
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 97
Score = 43.9 bits (103), Expect = 7e-07
Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
PT L++G L N+ A L + F +G + ++ + +++Y+ A AA
Sbjct: 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTID------HVKGDSFAYIQYESLDAAQAA 69
Query: 149 IRALNRQNFQGSE--IIVDF 166
+ G + + VDF
Sbjct: 70 CAKMRGFPLGGPDRRLRVDF 89
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human
(Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 44.2 bits (104), Expect = 8e-07
Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 12/90 (13%)
Query: 89 PTRTLFIGRL-------NKNSREA---DLEQAFAEYGKVISVRVVRDFVTGHSKRYGF-- 136
PT L + + + E D+ ++YG V S+ + R G
Sbjct: 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIF 62
Query: 137 LEYDCEKACLAAIRALNRQNFQGSEIIVDF 166
+E+ C A++ L + F ++ +
Sbjct: 63 VEFTSVFDCQKAMQGLTGRKFANRVVVTKY 92
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 89
Score = 42.9 bits (100), Expect = 1e-06
Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 91 RTLFIGRLNKNSREADL---EQAFAEYGKVISVRVVRDFVTGHSKRYGF---LEYDCEKA 144
+F+ L++ + ++ + F ++GK+ V + S+ + Y +
Sbjct: 9 NLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSED 68
Query: 145 CLAAIRALNRQNFQGSEI 162
L AI+ +N G +
Sbjct: 69 ALRAIQCVNNVVVDGRTL 86
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 42.0 bits (98), Expect = 3e-06
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+ TL + + + E DL+ F+ G V V ++ ++ + + A
Sbjct: 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGV----VKGFKFFQKDRKMALIQMGSVEEAVQA 64
Query: 149 IRALNRQNF-QGSEIIVDF 166
+ L+ + + + V F
Sbjct: 65 LIDLHNHDLGENHHLRVSF 83
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 85
Score = 42.0 bits (98), Expect = 3e-06
Identities = 11/77 (14%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
R+++I ++ D+++ + G+V++ +R + K F+ +D ++ +
Sbjct: 6 NRSVYIKGFPTDATLDDIKEWLEDKGQVLN-IQMRRTLHKAFKGSIFVVFDSIESAKKFV 64
Query: 150 RALNRQNFQGSEIIVDF 166
Q ++ +++++ F
Sbjct: 65 -ETPGQKYKETDLLILF 80
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 104
Score = 42.5 bits (99), Expect = 3e-06
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 11/85 (12%)
Query: 87 TDPTRTLFIGRLN-----KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDC 141
+ + L N ++ A E F Y K + + S + + +
Sbjct: 2 SSGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYF------KSFKRVRINFSN 55
Query: 142 EKACLAAIRALNRQNFQGSEIIVDF 166
+ A L++ F G E+ + F
Sbjct: 56 PLSAADARLRLHKTEFLGKEMKLYF 80
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 89
Score = 41.2 bits (96), Expect = 6e-06
Identities = 11/84 (13%), Positives = 24/84 (28%), Gaps = 9/84 (10%)
Query: 86 STDPTRTLFIGRLNKNS-READLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+ R + I + L Q +G + + ++ + F+E +
Sbjct: 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLIL------NKINEAFIEMATTED 57
Query: 145 CLAAIRA--LNRQNFQGSEIIVDF 166
AA+ G + V
Sbjct: 58 AQAAVDYYTTTPALVFGKPVRVHL 81
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor
PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 86
Score = 40.9 bits (95), Expect = 7e-06
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 91 RTLFIGRLNKN-SREADLEQAFAEYGKVISVRVVRDF-VTGHSKRYGFLEYDCEKACLAA 148
R + I L+ E L ++F +G + + + + F+ ++ + + A
Sbjct: 5 REIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERA 64
Query: 149 IRALNRQNFQGSEIIVDF 166
+ +NR EI V
Sbjct: 65 L-QMNRSLLGNREISVSL 81
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 40.8 bits (95), Expect = 7e-06
Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 87 TDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACL 146
+ + +F+GR + E +L + F++YG V+ V + + + + F+ + ++
Sbjct: 2 SSGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPK-----PFRAFAFVTFADDQIAQ 56
Query: 147 AAIRALNRQNFQGSEIIVDF 166
+ +G + +
Sbjct: 57 SLCG--EDLIIKGISVHISN 74
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif,
single-stranded-interacting protein 1, RBMS1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 40.5 bits (94), Expect = 1e-05
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 88 DPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLA 147
DPT L+I L + E +LE + + + +G S+ GF + + C A
Sbjct: 17 DPT-NLYISNLPLSMDEQELEN-MLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEA 74
Query: 148 AIRALNRQNFQGSEIIV 164
I N + + +
Sbjct: 75 VIGHFNGKFIKTPPGVS 91
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein
{Human (Homo sapiens) [TaxId: 9606]}
Length = 109
Score = 40.5 bits (94), Expect = 2e-05
Identities = 21/112 (18%), Positives = 35/112 (31%), Gaps = 8/112 (7%)
Query: 91 RTLFIGRLN-KNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
L + LN + L F YG V V+++ + K ++ A+
Sbjct: 3 SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILF-----NKKENALVQMADGNQAQLAM 57
Query: 150 RALNRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKP 201
LN G I + + + PR G ++ G KP
Sbjct: 58 SHLNGHKLHGKPIRITLSKHQNVQ--LPREGQEDQGLTKDYGNSPLHRFKKP 107
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 39.7 bits (92), Expect = 2e-05
Identities = 12/77 (15%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 90 TRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAI 149
+ + + L ++S ++ +Y +KR F+ + AI
Sbjct: 5 SSGILVKNLPQDSNCQEVHDLLKDYDLKYCYVD-------RNKRTAFVTLLNGEQAQNAI 57
Query: 150 RALNRQNFQGSEIIVDF 166
+ ++ +F+G ++IV
Sbjct: 58 QMFHQYSFRGKDLIVQL 74
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus
auratus) [TaxId: 10036]}
Length = 91
Score = 39.5 bits (91), Expect = 3e-05
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
S + LFIG LN N A+L+ A +E + VV TG ++++G+++++ +
Sbjct: 8 SESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVR-TGTNRKFGYVDFESAED 66
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGR 170
A+ L G+EI ++ GR
Sbjct: 67 LEKALE-LTGLKVFGNEIKLEKPKGR 91
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 111
Score = 38.4 bits (88), Expect = 8e-05
Identities = 13/95 (13%), Positives = 30/95 (31%), Gaps = 6/95 (6%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
SS + L + A++++ F+ +G + V +E+
Sbjct: 5 SSGRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVL------LPEGGITAIVEFLEPLE 58
Query: 145 CLAAIRALNRQNFQGSEIIVDFECGRVLPGWKPRR 179
A R L F + +++ V ++
Sbjct: 59 ARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKK 93
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein
L-like {Mouse (Mus musculus) [TaxId: 10090]}
Length = 104
Score = 37.9 bits (87), Expect = 1e-04
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ + + L ++ EADL +A ++G + V ++ KR +E++ +
Sbjct: 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMM------PFKRQALVEFENIDSA 64
Query: 146 LAAIRALNRQNFQ 158
+
Sbjct: 65 KECVTFAADVPVY 77
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9
(SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 98
Score = 36.3 bits (83), Expect = 5e-04
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 7/81 (8%)
Query: 86 STDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKAC 145
+ + + L + DL+ E G V + G +EY ++
Sbjct: 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDV-------CYADVQKDGMGMVEYLRKEDM 63
Query: 146 LAAIRALNRQNFQGSEIIVDF 166
A+R L+ F+ E +
Sbjct: 64 EYALRKLDDTKFRSHEGETSY 84
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2,
PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 88
Score = 35.2 bits (80), Expect = 0.001
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 8/80 (10%)
Query: 89 PTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAA 148
P+R L I +L E ++ + V + + K FLE E+A +
Sbjct: 7 PSRVLHIRKLPGEVTETEVIALGLPF------GKVTNILMLKGKNQAFLELATEEAAITM 60
Query: 149 IRA--LNRQNFQGSEIIVDF 166
+ + + I + +
Sbjct: 61 VNYYSAVTPHLRNQPIYIQY 80
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 81
Score = 34.5 bits (79), Expect = 0.001
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
Query: 92 TLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRA 151
+ + + S L FA+YG ++ + + + Y + A+ +
Sbjct: 6 WVTVFGFPQASASYIL-LQFAQYGNILKHVMSNT------GNWMHIRYQSKLQARKAL-S 57
Query: 152 LNRQNFQGSEII 163
+ + F S +I
Sbjct: 58 KDGRIFGESIMI 69
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila
melanogaster [TaxId: 7227]}
Length = 83
Score = 33.3 bits (75), Expect = 0.004
Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 6/83 (7%)
Query: 85 SSTDPTRTLFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKA 144
+ P + LF+ L + + E L F ++ + + F+E+ E
Sbjct: 3 TEQPPNQILFLTNLPEETNEMMLSMLFNQFPG-----FKEVRLVPNRHDIAFVEFTTELQ 57
Query: 145 CLAAIRALNRQNF-QGSEIIVDF 166
AA AL + + F
Sbjct: 58 SNAAKEALQGFKITPTHAMKITF 80
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich
1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 87
Score = 29.5 bits (65), Expect = 0.092
Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 12/97 (12%)
Query: 93 LFIGRLNKNSREADLEQAFAEYGKVISVRVVRDFVTGHSKRYGFLEYDCEKACLAAIRAL 152
+ + L + DL+ E G V + + G +E+ ++ A+R L
Sbjct: 3 VVVSGLPPSGSWQDLKDHMREAGDV-------CYADVYRDGTGVVEFVRKEDMTYAVRKL 55
Query: 153 NRQNFQGSEIIVDFECGRVLPGWKPRRLGGGWGGNRN 189
+ F+ E + + +G +R+
Sbjct: 56 DNTKFRSHEGETAYIRVK-----VDGPRSPSYGRSRS 87
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 95
Score = 27.9 bits (62), Expect = 0.41
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Query: 105 ADLEQAFAEYGKVISVRVVRD-----FVTGHS 131
+L Q YG ++ VR+ + F HS
Sbjct: 39 TELMQTLGSYGTIVLVRINQGQMLVTFADSHS 70
>d1iofa_ c.56.4.1 (A:) Pyrrolidone carboxyl peptidase (pyroglutamate
aminopeptidase) {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 208
Score = 26.6 bits (58), Expect = 2.0
Identities = 11/62 (17%), Positives = 20/62 (32%)
Query: 32 RDAKSSSGQTVKYWYPYCITYDPIQAGSIDGTDTIPHDRAILRALRSTYKPHTSSTDPTR 91
R A ++ + I +PI G+ + + I++ L P S
Sbjct: 80 RIAVNAIDARIPDNEGKKIEDEPIVPGAPTAYFSTLPIKKIMKKLHERGIPAYISNSAGL 139
Query: 92 TL 93
L
Sbjct: 140 YL 141
>d1c9oa_ b.40.4.5 (A:) Major cold shock protein {Bacillus
caldolyticus [TaxId: 1394]}
Length = 66
Score = 24.4 bits (53), Expect = 3.6
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 130 HSKRYGFLEYDCEKACLAAIRALNRQNF 157
+ K YGF+E + A+ + F
Sbjct: 11 NEKGYGFIEVEGGSDVFVHFTAIQGEGF 38
>d1mu2a2 e.8.1.2 (A:3-429) HIV-1 reverse transcriptase {Human
immunodeficiency virus type 2 [TaxId: 11709]}
Length = 427
Score = 26.1 bits (57), Expect = 3.7
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 191 GQLRFGGRNKPWVKPVQLMNERELGEWRK 219
GQL P+ P + +++ +WR
Sbjct: 43 GQLEEAPPTNPYNTPTFAIKKKDKNKWRM 71
>d1g6pa_ b.40.4.5 (A:) Major cold shock protein {Thermotoga maritima
[TaxId: 2336]}
Length = 66
Score = 23.9 bits (52), Expect = 6.2
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 131 SKRYGFLEYDCEKACLAAIRALNRQNF----QGSEIIVDFECGR 170
K YGF+ D A+ + F +G + + + G+
Sbjct: 11 KKGYGFITKDEGGDVFVHWSAIEMEGFKTLKEGQVVEFEIQEGK 54
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella
typhimurium [TaxId: 90371]}
Length = 411
Score = 25.5 bits (55), Expect = 6.4
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 167 ECGRVLPGWKPRRLGGGWGGNRNSGQLRFGGRNKPWVKPVQL 208
E R+ K + G+G N GQ++ W+ L
Sbjct: 15 ETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARML 56
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.407
Gapped
Lambda K H
0.267 0.0463 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 858,616
Number of extensions: 39827
Number of successful extensions: 211
Number of sequences better than 10.0: 1
Number of HSP's gapped: 185
Number of HSP's successfully gapped: 86
Length of query: 225
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 143
Effective length of database: 1,281,736
Effective search space: 183288248
Effective search space used: 183288248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.1 bits)