Query psy2222
Match_columns 264
No_of_seqs 174 out of 322
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 19:18:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2222.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2222hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yug_A Protein FRG1; spliceoso 100.0 5.7E-37 1.9E-41 257.0 16.8 150 39-191 5-155 (155)
2 3llp_A Fascin; beta-trefoil, a 99.8 3.5E-21 1.2E-25 186.8 12.0 120 63-188 14-139 (493)
3 3llp_A Fascin; beta-trefoil, a 99.8 3.6E-19 1.2E-23 172.7 13.8 122 61-188 261-383 (493)
4 2yug_A Protein FRG1; spliceoso 99.2 5.6E-11 1.9E-15 99.0 11.8 92 43-145 57-150 (155)
5 3q7x_A De novo designed beta-t 97.9 0.00051 1.8E-08 55.3 15.4 116 63-185 8-127 (132)
6 3snv_A Symfoil-4T/permutation 97.9 0.00055 1.9E-08 55.9 14.9 114 64-185 13-130 (143)
7 3p6i_A De novo designed beta-t 97.7 0.0015 5.2E-08 53.3 14.9 97 61-163 41-142 (142)
8 3p6j_A De novo designed beta-t 97.7 0.002 7E-08 52.5 15.6 102 63-171 33-139 (142)
9 1hcd_A Hisactophilin; actin bi 97.5 0.0026 8.8E-08 48.3 12.3 93 70-170 11-103 (118)
10 1nun_A Fibroblast growth facto 97.2 0.0055 1.9E-07 50.1 12.7 118 63-186 17-143 (145)
11 1bfg_A Basic fibroblast growth 97.2 0.0066 2.3E-07 49.7 12.9 122 58-185 16-143 (146)
12 1rg8_A Heparin-binding growth 97.1 0.014 4.8E-07 47.7 14.0 118 62-185 17-142 (146)
13 1q1u_A FGF-12, fibrobast growt 97.1 0.01 3.5E-07 48.4 13.1 123 57-185 6-140 (144)
14 1jlx_A Agglutinin, amaranthin, 97.1 0.0027 9.2E-08 57.4 10.3 77 108-184 6-100 (303)
15 2fdb_M FGF8B, fibroblast growt 97.1 0.011 3.9E-07 49.2 13.0 126 56-186 21-157 (164)
16 1rg8_A Heparin-binding growth 96.9 0.0088 3E-07 48.9 11.0 77 108-186 17-96 (146)
17 1jlx_A Agglutinin, amaranthin, 96.9 0.011 3.7E-07 53.5 12.2 100 62-165 4-127 (303)
18 1qql_A Fibroblast growth facto 96.9 0.0043 1.5E-07 50.4 8.6 104 57-166 3-116 (140)
19 1ihk_A GLIA-activating factor; 96.8 0.016 5.6E-07 48.7 12.0 117 63-185 30-157 (174)
20 1nun_A Fibroblast growth facto 96.8 0.017 5.8E-07 47.1 11.6 76 108-185 16-93 (145)
21 3p6j_A De novo designed beta-t 96.8 0.023 7.7E-07 46.3 12.0 75 98-173 22-99 (142)
22 1q1u_A FGF-12, fibrobast growt 96.7 0.015 5E-07 47.5 10.5 76 108-185 12-89 (144)
23 1qql_A Fibroblast growth facto 96.6 0.0096 3.3E-07 48.4 8.7 76 108-185 12-89 (140)
24 3q7x_A De novo designed beta-t 96.6 0.021 7.1E-07 45.8 10.4 64 109-173 8-74 (132)
25 1bfg_A Basic fibroblast growth 96.6 0.019 6.6E-07 46.9 10.4 77 108-186 20-99 (146)
26 1ijt_A FGF4, fibroblast growth 96.6 0.037 1.3E-06 44.1 11.8 115 63-184 6-127 (128)
27 1ihk_A GLIA-activating factor; 96.5 0.019 6.4E-07 48.3 10.4 76 108-185 29-106 (174)
28 1hcd_A Hisactophilin; actin bi 96.4 0.031 1E-06 42.4 9.4 71 109-181 4-74 (118)
29 3p6i_A De novo designed beta-t 96.3 0.074 2.5E-06 43.3 12.3 65 108-173 42-109 (142)
30 3f1r_A FGF-20, fibroblast grow 96.3 0.054 1.8E-06 46.8 11.9 117 64-186 68-195 (211)
31 2p39_A Fibroblast growth facto 96.3 0.11 3.8E-06 42.8 13.4 119 62-188 15-140 (155)
32 3hbw_A Fibroblast growth facto 96.3 0.064 2.2E-06 45.8 12.2 117 64-186 20-147 (193)
33 1ijt_A FGF4, fibroblast growth 96.2 0.039 1.3E-06 44.0 10.2 74 109-185 6-83 (128)
34 3f1r_A FGF-20, fibroblast grow 96.1 0.052 1.8E-06 46.9 11.1 76 108-185 66-143 (211)
35 2fdb_M FGF8B, fibroblast growt 96.1 0.056 1.9E-06 45.0 10.8 78 108-186 31-112 (164)
36 3snv_A Symfoil-4T/permutation 95.9 0.065 2.2E-06 43.4 10.3 59 114-173 17-77 (143)
37 3hbw_A Fibroblast growth facto 95.9 0.056 1.9E-06 46.2 10.1 74 110-185 20-95 (193)
38 2p39_A Fibroblast growth facto 95.8 0.08 2.7E-06 43.7 10.3 75 108-185 15-95 (155)
39 1pwa_A FGF-19, fibroblast grow 95.7 0.074 2.5E-06 44.2 9.9 118 63-188 11-138 (162)
40 3pg0_A Threefoil; symmetric de 95.3 0.88 3E-05 36.3 16.1 90 95-184 62-163 (165)
41 2p23_A FGF-19, fibroblast grow 94.5 0.18 6.3E-06 43.0 9.1 116 63-186 23-148 (194)
42 2p23_A FGF-19, fibroblast grow 94.3 0.27 9.2E-06 41.9 9.7 74 109-185 23-104 (194)
43 1pwa_A FGF-19, fibroblast grow 94.2 0.21 7.1E-06 41.4 8.5 74 109-185 11-92 (162)
44 1sr4_A CDT A, cytolethal diste 93.7 0.33 1.1E-05 41.7 9.1 70 49-125 98-169 (206)
45 1sr4_A CDT A, cytolethal diste 89.7 2.9 9.9E-05 35.8 10.4 71 93-163 93-167 (206)
46 3aj6_A Main hemagglutinin comp 89.7 4.3 0.00015 36.1 12.1 89 95-184 44-140 (286)
47 3vsf_A Ricin B lectin; GH43 CB 88.1 18 0.00063 34.4 17.3 96 94-189 395-502 (526)
48 3ef2_A Agglutinin, lectin; bet 86.2 18 0.00062 32.3 15.9 93 94-186 43-156 (293)
49 3nbc_A Ricin B-like lectin; la 86.0 5.5 0.00019 32.0 9.5 81 99-184 49-143 (148)
50 1ybi_A HA33A, HA33/A, non-toxi 85.7 13 0.00045 32.9 12.8 90 95-184 39-138 (288)
51 1sr4_C CDT C, cytolethal diste 85.0 1.2 4E-05 37.0 5.0 70 44-121 40-118 (166)
52 3pg0_A Threefoil; symmetric de 85.0 10 0.00036 29.8 10.8 89 97-185 17-117 (165)
53 2f2f_C CDT C, cytolethal diste 84.9 1 3.5E-05 38.1 4.6 71 43-121 59-138 (186)
54 2x2s_A Agglutinin, agglutinin 84.0 11 0.00038 30.5 10.2 75 90-164 40-127 (153)
55 3aj6_A Main hemagglutinin comp 82.7 25 0.00086 31.0 15.7 90 95-184 89-189 (286)
56 1ybi_A HA33A, HA33/A, non-toxi 79.8 12 0.00042 33.1 10.1 81 103-184 5-93 (288)
57 3phz_A Ricin B-related lectin; 79.2 9.3 0.00032 34.3 9.1 91 94-185 44-148 (286)
58 3nbc_A Ricin B-like lectin; la 78.7 5.4 0.00018 32.1 6.7 58 105-163 3-75 (148)
59 2vse_A MTX holotoxin, mosquito 78.3 19 0.00065 36.9 12.1 92 94-185 449-551 (841)
60 1ups_A Glcnac-alpha-1,4-GAL-re 74.5 55 0.0019 30.4 14.4 90 69-163 299-395 (420)
61 3ol0_A De novo designed monome 72.7 8.2 0.00028 25.4 5.1 37 108-144 7-44 (48)
62 3kmv_A Alpha-L-arabinofuranosi 67.5 48 0.0017 26.9 11.0 117 62-184 10-144 (157)
63 3kmv_A Alpha-L-arabinofuranosi 64.5 15 0.0005 30.0 6.2 79 107-185 9-98 (157)
64 2vse_A MTX holotoxin, mosquito 64.4 42 0.0014 34.4 10.9 91 94-184 401-502 (841)
65 2x2s_A Agglutinin, agglutinin 55.9 17 0.00058 29.4 5.0 57 130-186 39-102 (153)
66 3akh_A Putative secreted alpha 55.6 90 0.0031 29.1 10.9 100 64-171 324-439 (468)
67 3ef2_A Agglutinin, lectin; bet 51.7 1.1E+02 0.0036 27.3 10.2 83 104-186 3-105 (293)
68 2y9f_A LSL-150, hemolytic lect 51.0 93 0.0032 24.8 9.0 72 92-163 41-124 (150)
69 3vsf_A Ricin B lectin; GH43 CB 42.7 2.2E+02 0.0075 26.8 11.5 51 95-145 443-499 (526)
70 3h6r_A Clitocypin analog; cyst 40.9 25 0.00084 28.6 3.8 41 144-184 4-55 (152)
71 3akh_A Putative secreted alpha 40.8 51 0.0017 30.8 6.6 77 108-186 322-409 (468)
72 1wd3_A Alpha-L-arabinofuranosi 34.3 41 0.0014 32.2 4.7 75 108-185 332-425 (482)
73 3gqs_A Adenylate cyclase-like 33.2 1.1E+02 0.0039 22.1 6.3 41 119-160 29-74 (106)
74 2k49_A UPF0339 protein SO_3888 31.3 76 0.0026 24.5 5.1 64 99-163 5-82 (118)
75 1ups_A Glcnac-alpha-1,4-GAL-re 29.6 2.2E+02 0.0077 26.1 9.0 63 108-170 291-358 (420)
76 2e4m_C HA-17; botulinum toxin, 29.1 2.1E+02 0.0071 22.5 7.3 77 70-162 22-101 (146)
77 2pie_A E3 ubiquitin-protein li 27.1 1.6E+02 0.0054 22.6 6.4 66 94-160 5-80 (138)
78 2k8e_A UPF0339 protein YEGP; p 26.5 1.4E+02 0.0048 23.3 5.9 64 98-162 20-97 (130)
79 1t9f_A Protein 1D10; structura 26.0 1.5E+02 0.0051 24.2 6.4 76 108-184 74-175 (187)
80 3h6r_A Clitocypin analog; cyst 22.0 1.7E+02 0.0058 23.6 5.7 48 115-162 24-80 (152)
81 3vwc_A Serine protease inhibit 21.4 3.2E+02 0.011 21.9 8.4 63 96-161 43-111 (149)
82 2vxt_I Interleukin-18; FAB, IL 21.0 3.3E+02 0.011 22.0 7.2 67 58-126 56-132 (157)
83 3ltq_A Interleukin-1 beta; lan 20.1 3.6E+02 0.012 22.0 8.3 96 47-143 61-167 (171)
No 1
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=100.00 E-value=5.7e-37 Score=257.03 Aligned_cols=150 Identities=50% Similarity=0.863 Sum_probs=140.4
Q ss_pred CCCCCcCCCCCeeeccccCCCCCCEEEEeCCCcEEEEcCCCceEeeccCCC-CCCCCccccEEEEEecCCeEEEEecCCe
Q psy2222 39 QVDPDIENYAGWTQVKHIKDIVGAISIEFGKRTFVSALDNGLFILGAIHED-KEGPSPEEIFTAILVNDSKVAFKSGFDK 117 (264)
Q Consensus 39 ~~~~d~~~~~~W~~~~~~~dI~Gp~~i~~~s~~yL~a~~~G~f~~~~~~~~-~e~~~~~evf~~~~v~dt~~~lKs~~Gk 117 (264)
..++|+. ++||+|+.++||+||++|++.+++||.|+++|.|++++|+.. .+.|+++|+|++++.++++|+|||++|+
T Consensus 5 ~~~~d~~--~gW~~~~~~~~i~g~~~i~~~~~~y~~A~~~G~~t~~~~~~~~~~~~~~~E~f~l~~~~~~~v~LRs~~Gk 82 (155)
T 2yug_A 5 SSGLDIV--GIWWTVSNFGEISGTIAIEMDKGAYIHALDNGLFTLGAPHREVDEGPSPPEQFTAVKLSDSRIALKSGYGK 82 (155)
T ss_dssp CCSSCEE--TTEEECSSGGGCCEEEEEECSSSCBEEECTTSCEEECCCCSSSSCCCCTTTCEEEEECSSSCEEEEETTSC
T ss_pred ccCCccc--CcEEecCchhcCCCCEEEEeCCCCEEEEEcCCcEEEccccccccCCCCCcceEEEEECCCCEEEEEeCCCC
Confidence 3456665 999999999999999999999999999999999999888764 5789999999999999999999999999
Q ss_pred EEEEecCCcEEEeccCCCCCCceEEEEeCCceEEeccCceeEEEecCCCeeEEecccCCCcceEEEEEcccccc
Q psy2222 118 YLSIDKNGRVTGRSDAVGPLEQWEPVFEDDNMALLGANQCFMSVSEQDDSIVATSRKAGKNEMVKLRSNSLHLK 191 (264)
Q Consensus 118 YLs~d~~G~v~a~a~a~g~~E~f~iv~~~g~~alq~~ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~~a~~~~ 191 (264)
||+++++|.|+|++++++++|+|+|++++|+|+||+.||+||++++++. |+|+++.++++|+|+||||+.++.
T Consensus 83 YLs~~~~G~v~a~a~~~g~~E~F~l~~~~G~~aLra~nG~yl~~~~~g~-l~a~a~~~~~~E~f~v~l~~~~~~ 155 (155)
T 2yug_A 83 YLGINSDGLVVGRSDAIGPREQWEPVFQDGKMALLASNSCFIRCNEAGD-IEAKNKTAGEEEMIKIRSCAERET 155 (155)
T ss_dssp BEEECSSSBEEECCSSCCTTTBEEEECSTTCCEEEETTSCBEEECSSSC-EEECCSCCCTTTCCEEEECSCCCC
T ss_pred EEEecCCCcEEeccCCCCCCCEEEEEEECCEEEEEeCCCCEEEEcCCCc-EEEecCCCCCCcEEEEEEecccCC
Confidence 9999999999999999999999999999999999999999999999887 999999999999999999999863
No 2
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=99.85 E-value=3.5e-21 Score=186.80 Aligned_cols=120 Identities=21% Similarity=0.278 Sum_probs=101.9
Q ss_pred EEEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecC---C-eEEEEecCCeEEEEecCCcEEEeccCCCCCC
Q psy2222 63 ISIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVND---S-KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLE 138 (264)
Q Consensus 63 ~~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~d---t-~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E 138 (264)
+.|+-..++||+|+..| |.+.+. +..+..+|||+|+++++ + .|.||||+|+||+||++|.|+|++++++|.|
T Consensus 14 ~gl~~~~~~ylt~e~fg-~~vna~---~~~l~~rQvw~l~~~~~~~~~~~~~lks~~G~yL~~d~~G~v~~~~~~~~~~~ 89 (493)
T 3llp_A 14 FGLINCGNKYLTAEAFG-FKVNAS---ASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDC 89 (493)
T ss_dssp EEEECTTSCEEEECSGG-GCEEEE---ESSCCGGGCEEEC-----CCCCCBCEECTTSCEEEECTTSCEEEEESSCCGGG
T ss_pred EEEEecCCceEEeeccC-CEEEec---cCCccceEEEEEEecCCCCCccEEEEecCCCcEeecCCCCcEEeCcccCCCCc
Confidence 55666669999999998 444333 33567799999999875 3 7999999999999999999999999999999
Q ss_pred ceEEEEe-CCceEEec-cCceeEEEecCCCeeEEecccCCCcceEEEEEccc
Q psy2222 139 QWEPVFE-DDNMALLG-ANQCFMSVSEQDDSIVATSRKAGKNEMVKLRSNSL 188 (264)
Q Consensus 139 ~f~iv~~-~g~~alq~-~ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~~a~ 188 (264)
.|+|+++ ||+|+||+ .+|+||+.+++. |.|+++++++.|+|.||+..-
T Consensus 90 ~f~~~~~~dG~w~lq~~~~g~yl~~~~~~--~~c~~~~~~~~~~w~~~la~h 139 (493)
T 3llp_A 90 RFLIVAHDDGRWSLQSEAHRRYFGGTEDR--LSCFAQTVSPAEKWSVHIAMH 139 (493)
T ss_dssp CEEEEECTTSEEEEEETTTCCEEEEEBTE--EEEEESSCCGGGCEEEEECSC
T ss_pred eEEEEECCCCeEEEEEcccCceecCCCce--EEEEeccCCccceeeeeeccC
Confidence 9999999 89999999 899999998763 999999999999999998655
No 3
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=99.80 E-value=3.6e-19 Score=172.75 Aligned_cols=122 Identities=18% Similarity=0.286 Sum_probs=107.7
Q ss_pred CCEEEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCC-eEEEEecCCeEEEEecCCcEEEeccCCCCCCc
Q psy2222 61 GAISIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDS-KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQ 139 (264)
Q Consensus 61 Gp~~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt-~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~ 139 (264)
+.+.|....++||+++++|. +.++++ .++++|+|+++.++++ +|+||+++|+||+++.+|.|+|++++++++|.
T Consensus 261 ~qVaL~s~ngkyVsa~~gg~--l~An~~---~~~~~EtFql~~~~~~~~vaLRs~~GkYl~~~~~g~v~a~~~~~g~~E~ 335 (493)
T 3llp_A 261 AQVVLQAANERNVSTRQGMD--LSANQD---EETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCY 335 (493)
T ss_dssp CEEEEECTTSCEEECC-CCC--CEEEES---CCSGGGCEEEEECTTTCCEEEECTTSCEEEECTTSBEEEEESSCCGGGC
T ss_pred CEEEEEecCCcEEEecCCce--EEeeCC---CCCCcEEEEEEEeCCCCEEEEEeCCCCEEEEeCCCcEEeccCCCCCcce
Confidence 33455545599999998875 444543 5899999999999974 99999999999999999999999999999999
Q ss_pred eEEEEeCCceEEeccCceeEEEecCCCeeEEecccCCCcceEEEEEccc
Q psy2222 140 WEPVFEDDNMALLGANQCFMSVSEQDDSIVATSRKAGKNEMVKLRSNSL 188 (264)
Q Consensus 140 f~iv~~~g~~alq~~ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~~a~ 188 (264)
|+|++++|+++|++.||+||+++.++. |.|+++.++++|+|.|++..+
T Consensus 336 F~i~~~~g~vaLkA~NGkyVsa~~~G~-L~An~~~~g~~E~F~l~l~nr 383 (493)
T 3llp_A 336 FDIEWRDRRITLRASNGKFVTSKKNGQ-LAASVETAGDSELFLMKLINR 383 (493)
T ss_dssp BEEEEETTEEEEECTTSCEEEECTTSB-EEEEESSCCGGGCBEEEECSC
T ss_pred EEEEeCCCeEEEEeCCCCEEEEcCCCE-EEEecCCCCCCeEEEEEECCC
Confidence 999999999999999999999999987 999999999999999998764
No 4
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.24 E-value=5.6e-11 Score=99.04 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=76.1
Q ss_pred CcCCCCCeeeccccCCCCCCEEEEeCC--CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEecCCeEEE
Q psy2222 43 DIENYAGWTQVKHIKDIVGAISIEFGK--RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKSGFDKYLS 120 (264)
Q Consensus 43 d~~~~~~W~~~~~~~dI~Gp~~i~~~s--~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs~~GkYLs 120 (264)
.+...+.|......+ + .|.|++ |+||+++.+|.+++ .++.++++|.|.++.. +++++||+.+|+||+
T Consensus 57 ~~~~~E~f~l~~~~~---~--~v~LRs~~GkYLs~~~~G~v~a-----~a~~~g~~E~F~l~~~-~G~~aLra~nG~yl~ 125 (155)
T 2yug_A 57 GPSPPEQFTAVKLSD---S--RIALKSGYGKYLGINSDGLVVG-----RSDAIGPREQWEPVFQ-DGKMALLASNSCFIR 125 (155)
T ss_dssp CCCTTTCEEEEECSS---S--CEEEEETTSCBEEECSSSBEEE-----CCSSCCTTTBEEEECS-TTCCEEEETTSCBEE
T ss_pred CCCCcceEEEEECCC---C--EEEEEeCCCCEEEecCCCcEEe-----ccCCCCCCCEEEEEEE-CCEEEEEeCCCCEEE
Confidence 344567887655433 2 445554 99999999997777 4667889999999988 789999999999999
Q ss_pred EecCCcEEEeccCCCCCCceEEEEe
Q psy2222 121 IDKNGRVTGRSDAVGPLEQWEPVFE 145 (264)
Q Consensus 121 ~d~~G~v~a~a~a~g~~E~f~iv~~ 145 (264)
++.+|.|+|+++.+++.|.|.+..+
T Consensus 126 ~~~~g~l~a~a~~~~~~E~f~v~l~ 150 (155)
T 2yug_A 126 CNEAGDIEAKNKTAGEEEMIKIRSC 150 (155)
T ss_dssp ECSSSCEEECCSCCCTTTCCEEEEC
T ss_pred EcCCCcEEEecCCCCCCcEEEEEEe
Confidence 9999999999999999999999776
No 5
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=97.93 E-value=0.00051 Score=55.30 Aligned_cols=116 Identities=17% Similarity=0.245 Sum_probs=83.5
Q ss_pred EEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCce
Q psy2222 63 ISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQW 140 (264)
Q Consensus 63 ~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f 140 (264)
+.+.+.. |-||.-+.+|...- ..+..++.-+|.+..+.-+.|++++ ..|.||+.+++|.|.++...-.+--.+
T Consensus 8 ~~~~~~~~g~~L~I~~dG~V~G-----t~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~~G~v~Gs~~~s~ec~fl 82 (132)
T 3q7x_A 8 VLLRSTETGQFLRINPDGTVDG-----TRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPDGTVDGTRDRSDPGIQF 82 (132)
T ss_dssp EEEEETTTCCEEEECTTSBEEE-----ECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSBEEEECC-CCGGGCE
T ss_pred heeeeccCcEEEEECCCCcEEe-----ecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECCCCCEeeccCCCCCceeE
Confidence 4444444 88999999986654 1334567778888888777999999 699999999999999976643333345
Q ss_pred EEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 141 EPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 141 ~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
++... .|.+.++.. .|.||+.+..|. +.+. ...++...|.=++
T Consensus 83 E~~~~~~g~v~ikg~~sg~YLamnk~G~-lygs-~~~~~eC~F~E~~ 127 (132)
T 3q7x_A 83 QISPEGNGEVLLRSTETGQFLRINPDGT-VDGT-RDRSDPGIQFQIS 127 (132)
T ss_dssp EEEEEETTEEEEEETTTCCEEEECTTSB-EEEE-CCTTCGGGCEEEE
T ss_pred EEEeecCcEEEEEeccCCeEEEECCCCc-CcCC-CCCCCCCEEEEEE
Confidence 66554 588888875 799999999997 7664 3355566665444
No 6
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=97.87 E-value=0.00055 Score=55.87 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=79.7
Q ss_pred EEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCce-E
Q psy2222 64 SIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQW-E 141 (264)
Q Consensus 64 ~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f-~ 141 (264)
.....+|-||..+.+|...-. .+..++.-+|.+..+.-+.|+|++ ..|.||+.+++|.|.++.+- ++...| +
T Consensus 13 ~~~~~~g~~LqI~~dG~V~Gt-----~~~~~~~s~l~~~sv~~G~V~I~gv~sg~yL~m~~~G~v~Gs~~~-~~ec~flE 86 (143)
T 3snv_A 13 GNYKKGGQYLRINPDGTVDGT-----RDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGTVDGTRDR-SDTHIQFQ 86 (143)
T ss_dssp ------CCEEEECTTSBEEEE-----SCTTCTTSEEEEEEEETTEEEEEETTTTEEEEECTTSBEEEECCT-TCTTSEEE
T ss_pred EeEEcCCEEEEECCCCCEeee-----cCCCCCceEEEEEeccCCeEEEEEEcccEEEeECCCCCEeecccC-CCcceEEE
Confidence 445566888999888865542 233456677888888778999999 69999999999999998764 444555 5
Q ss_pred EEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 142 PVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 142 iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
++.. .+.+.+++. .|.||+.+..|. +.+. ...+.+..|.=++
T Consensus 87 ~~~e~~g~v~i~~~~sg~Ylamnk~Gr-l~Gs-~~~s~eC~F~E~~ 130 (143)
T 3snv_A 87 ISPEGNGEVLLKSTETGQYLRINPDGT-VDGT-RDRSDTHIQFQIS 130 (143)
T ss_dssp EEECSTTEEEEEETTTCCEEEECTTSB-EEEE-SCTTCTTCCEEEE
T ss_pred EEecCCcEEEEEEeeCCEEEEEcCCCc-CcCc-CCCCCCeeEEEEE
Confidence 6655 577788875 789999999997 6654 3445555555544
No 7
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=97.71 E-value=0.0015 Score=53.32 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=74.6
Q ss_pred CCEEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCC
Q psy2222 61 GAISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLE 138 (264)
Q Consensus 61 Gp~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E 138 (264)
++..|.+.. +-||.-+.+|...-. .+..++.-+|.+..+.-+.|+|++ ..|.||+.+++|.|.++.+ .++..
T Consensus 41 ~~r~LYcr~~g~hLqI~~dG~V~Gt-----~~~~s~~s~Lei~sv~~GvV~I~Gv~tg~yL~Mn~dG~l~Gs~~-~s~ec 114 (142)
T 3p6i_A 41 GEVLLKSTETGQYLRINPDGTVDGT-----RDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGTVDGTRD-RSDTH 114 (142)
T ss_dssp SCEEEEETTTCCEEEECTTSBEEEE-----CCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSBEEEECC-TTCTT
T ss_pred ceEEEEEcCCCEEEEECCCCcCcCc-----CCCCCCceEEEEEeccCCEEEEEEecCceEEeECCCCCCccccC-CCCCe
Confidence 457899988 889999999865441 233456677888877777999999 6899999999999999766 44444
Q ss_pred c-eEEEEe-CCceEEecc-CceeEEEec
Q psy2222 139 Q-WEPVFE-DDNMALLGA-NQCFMSVSE 163 (264)
Q Consensus 139 ~-f~iv~~-~g~~alq~~-ng~fLs~~~ 163 (264)
. +++... .|-++|+.. .|.||+.++
T Consensus 115 ~flEi~~v~~G~V~Ikgv~Sg~YLaMn~ 142 (142)
T 3p6i_A 115 IQFQISPEGNGEVLLKSTETGQYLRINP 142 (142)
T ss_dssp CCEEEEECSSSCEEEEETTTTEEEEECC
T ss_pred EEEEEEEEeCCEEEEEEEecceEEEECC
Confidence 5 456655 589999986 899999863
No 8
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=97.70 E-value=0.002 Score=52.50 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=76.8
Q ss_pred EEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEec-CCeEEEEecCCcEEEeccCCCCCCce
Q psy2222 63 ISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKSG-FDKYLSIDKNGRVTGRSDAVGPLEQW 140 (264)
Q Consensus 63 ~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs~-~GkYLs~d~~G~v~a~a~a~g~~E~f 140 (264)
..|.+.. +-||.-+.+|...-. .+..++.-+|.+..+.-+.|+|++. .|.||+.+++|.|.++.+ .++...|
T Consensus 33 ~~LYcr~~g~~LqI~~dG~V~Gt-----~~~~~~~s~lei~sv~~G~V~L~g~~sg~yL~mn~~G~l~Gs~~-~t~ecsf 106 (142)
T 3p6j_A 33 VLLKSTETGQYLRINPDGTVDGT-----RDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGTVDGTRD-RSDTHIQ 106 (142)
T ss_dssp EEEEETTTCCEEEECTTSBEEEE-----CCTTCGGGCEEEEEEETTEEEEEETTTTEEEEECTTSBEEEECC-TTCGGGC
T ss_pred EEEEEeCCCEEEEECCCCCEeee-----cCCCCCceEEEEEEccCCEEEEEEecCCEEEeECCCCCEeeccc-CCCCceE
Confidence 6788887 888888888865441 2334566778888877779999985 899999999999999766 3444555
Q ss_pred -EEEEe-CCceEEecc-CceeEEEecCCCeeEEe
Q psy2222 141 -EPVFE-DDNMALLGA-NQCFMSVSEQDDSIVAT 171 (264)
Q Consensus 141 -~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~ 171 (264)
+++.. .+.+.++.. .|.||+++..|. +.+.
T Consensus 107 lEi~~en~y~v~i~g~~sg~YLamnk~Gr-lygs 139 (142)
T 3p6j_A 107 FQISPEGNGEVLLKSTETGQYLRINPDGT-VDGT 139 (142)
T ss_dssp EEEEECSTTCEEEEETTTCCEEEECTTSB-EEEE
T ss_pred EEEEeecCcEEEEEEecCCEEEEECCCcC-CccC
Confidence 55555 477778864 799999999987 7664
No 9
>1hcd_A Hisactophilin; actin binding; NMR {Dictyostelium discoideum} SCOP: b.42.5.2 PDB: 1hce_A
Probab=97.49 E-value=0.0026 Score=48.26 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=74.2
Q ss_pred CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEeCCce
Q psy2222 70 RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFEDDNM 149 (264)
Q Consensus 70 ~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~~g~~ 149 (264)
|-||+|+..-.-+--. -++----|-++.- +.+|+|||+.|+|+++.....|.-.-.--|....|-+.-..|++
T Consensus 11 gh~lsae~~~vkthhg------hhdhhthfhvenh-g~kvalrth~gkyvsigdhkqvylshh~hg~hslfhlehh~gkv 83 (118)
T 1hcd_A 11 GHFLSAEGEAVKTHHG------HHDHHTHFHVENH-GGKVALKTHCGKYLSIGDHKQVYLSHHLHGDHSLFHLEHHGGKV 83 (118)
T ss_dssp TCEEEEETTEEEEECS------CSSCCCCCEEEEE-TTEEEEESSSSCEEEEEETTEEEEECCCSSSSSSBEEEEETTEE
T ss_pred CeeeeccccccccccC------cccccceEEeecC-CceEEEEeccCcEEEecCCceEEEEeeecCcceeEeeeccCCEE
Confidence 8899998765433311 1233345666654 44999999999999999988898888889999999999999999
Q ss_pred EEeccCceeEEEecCCCeeEE
Q psy2222 150 ALLGANQCFMSVSEQDDSIVA 170 (264)
Q Consensus 150 alq~~ng~fLs~~~~~~~l~a 170 (264)
.|+..+-.||+++.-+. ++.
T Consensus 84 sikghhhhyi~~d~hgh-v~t 103 (118)
T 1hcd_A 84 SIKGHHHHYISADHHGH-VST 103 (118)
T ss_dssp EEECSTTCEEEECGGGC-EEE
T ss_pred EEecccceEEeccCCcc-ccc
Confidence 99999999999999886 554
No 10
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=97.25 E-value=0.0055 Score=50.07 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=83.1
Q ss_pred EEEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCceE
Q psy2222 63 ISIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWE 141 (264)
Q Consensus 63 ~~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~ 141 (264)
..|.+..+-||.-+.+|...-. .+..++.-+|.+..+.-+.|+|++ ..|+||+.|+.|.|.+.. ..++...|.
T Consensus 17 ~~LY~~~g~~LqI~~dG~V~Gt-----~~~~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~Lygs~-~~~~eC~F~ 90 (145)
T 1nun_A 17 RKLFSFTKYFLKIEKNGKVSGT-----KKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSK-EFNNDCKLK 90 (145)
T ss_dssp EEEEETTSCEEEECTTSCEEEE-----CCSCCTTSCEEEEEEETTEEEEEETTTTEEEEECTTSBEEEES-SCCTTSEEE
T ss_pred EEEEEcCCeEEEECCCCcEeee-----cCCCCCceeEEEEEecCCeEEEEEcccCcEEEEcCCCCEeecC-CCCCCcEEE
Confidence 4788888889999999865541 334466778888888888999999 699999999999999964 577888885
Q ss_pred EEEeCCce-EEecc------CceeEEEecCCCeeEEecc-cCCCcceEEEEEc
Q psy2222 142 PVFEDDNM-ALLGA------NQCFMSVSEQDDSIVATSR-KAGKNEMVKLRSN 186 (264)
Q Consensus 142 iv~~~g~~-alq~~------ng~fLs~~~~~~~l~a~s~-~~g~~e~~~iR~~ 186 (264)
=.+.++.| +..+. .+.||+++..|....+... .-.....|-+|..
T Consensus 91 E~~~en~Yn~Y~S~~~~~~~r~~yval~k~G~pr~g~~t~~~~~~~hFLp~~~ 143 (145)
T 1nun_A 91 ERIEENGYNTYASFNWQHNGRQMYVALNGKGAPRRGQKTRRKNTSAHFLPMVV 143 (145)
T ss_dssp EEECTTSCEEEEEEEEEETTEEEECCBCTTSCBCBGGGCCTTSGGGCEEEEEC
T ss_pred EEEccCCcEEEEEeccCCCCceEEEEECCCCCCccCcccCCCCccccEEeecC
Confidence 55554333 33333 2589999888863333222 2234566777653
No 11
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=97.22 E-value=0.0066 Score=49.66 Aligned_cols=122 Identities=11% Similarity=0.123 Sum_probs=85.4
Q ss_pred CCCCCEEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCC
Q psy2222 58 DIVGAISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVG 135 (264)
Q Consensus 58 dI~Gp~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g 135 (264)
++.-++.|.+.. +-||.-+.+|...- ..+..++..+|.+..+.-+.|.||+ ..|+||+.|+.|.|.+... .+
T Consensus 16 ~~~r~~rLY~r~~g~~LqI~~dG~V~G-----t~~~~~~~s~l~i~sv~~G~V~I~gv~s~~YLcMn~~G~Lygs~~-~t 89 (146)
T 1bfg_A 16 HFKDPKRLYCKNGGFFLRIHPDGRVDG-----VREKSDPHIKLQLQAEERGVVSIKGVSANRYLAMKEDGRLLASKS-VT 89 (146)
T ss_dssp ---CCEEEEETTTTEEEEECTTSCEEE-----ECCTTCGGGCEEEEECSTTEEEEEETTTTEEEEECTTSCEEEESS-CC
T ss_pred CcCccEEEEEcCCCEEEEECCCCeEEe-----ecCCCCCceEEEEEeccCCEEEEEEcccCcEEEEcCCCCEecccc-CC
Confidence 334467888887 78999998886554 1334567788999888888999999 6899999999999999665 67
Q ss_pred CCCceEEEEeC-CceEEecc--CceeEEEecCCCeeEEeccc-CCCcceEEEEE
Q psy2222 136 PLEQWEPVFED-DNMALLGA--NQCFMSVSEQDDSIVATSRK-AGKNEMVKLRS 185 (264)
Q Consensus 136 ~~E~f~iv~~~-g~~alq~~--ng~fLs~~~~~~~l~a~s~~-~g~~e~~~iR~ 185 (264)
....|.=.+.+ +=-++.+. .+.||+++..|....+.... -.....|-+|.
T Consensus 90 ~eC~F~E~~~eN~Yn~Y~S~~~~~~yvalnk~G~pk~G~~t~~~q~~~hFLP~~ 143 (146)
T 1bfg_A 90 DECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMS 143 (146)
T ss_dssp GGGCEEEEECTTSCEEEEESSSTTCBCCBCTTSSBCCGGGCCTTCGGGCEEEEE
T ss_pred CCceEEEEEeecCceEEEECCCCCEEEEECCCCCCccCCcCCCCCceeEeEEee
Confidence 77788655554 33344443 47899999888633333222 23456666664
No 12
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=97.14 E-value=0.014 Score=47.74 Aligned_cols=118 Identities=12% Similarity=0.146 Sum_probs=85.4
Q ss_pred CEEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCc
Q psy2222 62 AISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQ 139 (264)
Q Consensus 62 p~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~ 139 (264)
...|.+.. |.||.-+.+|...-. .+..++..+|.+..+.-+.|+||+ ..|+||+.|+.|.|.+.. ..++...
T Consensus 17 ~~qLY~r~~g~~LqI~~dG~V~Gt-----~~~~~~~s~l~i~sv~~G~V~I~gv~s~~YLcMn~~G~Lygs~-~~t~eC~ 90 (146)
T 1rg8_A 17 PKLLYCSNGGHFLRILPDGTVDGT-----RDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQ-TPNEECL 90 (146)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEE-----CCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEES-SCCGGGC
T ss_pred EEEEEEcCCCEEEEECCCCcEeee-----ccCCCCceEEEEEeecCCeEEEEEcccCcEEEECCCCCEeecC-CCCCCce
Confidence 56888888 899999999965541 334567788888888888999999 599999999999999955 5777788
Q ss_pred eEEEEeCCce-EEecc--C--ceeEEEecCCCeeEEeccc-CCCcceEEEEE
Q psy2222 140 WEPVFEDDNM-ALLGA--N--QCFMSVSEQDDSIVATSRK-AGKNEMVKLRS 185 (264)
Q Consensus 140 f~iv~~~g~~-alq~~--n--g~fLs~~~~~~~l~a~s~~-~g~~e~~~iR~ 185 (264)
|.=.+.++.| +..+. . +.||+++..|....+.... -.....|-+|.
T Consensus 91 F~E~~~eN~YntY~S~~y~~~~~yvalnk~G~pr~G~rt~~~q~~~hFLpr~ 142 (146)
T 1rg8_A 91 FLERLEENHYNTYISKKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLP 142 (146)
T ss_dssp EEEEEETTTEEEEEESTTGGGTCBCCBCTTSCBCCGGGCCTTCSTTCEEEEE
T ss_pred EEEEEccCCceEEEEeEcCCCCEEEEECCCCCCccCcccCCCCceeeEEecc
Confidence 8655554444 45543 3 7899999888633443222 23456676664
No 13
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=97.13 E-value=0.01 Score=48.44 Aligned_cols=123 Identities=13% Similarity=0.173 Sum_probs=85.1
Q ss_pred CCCCCC-EEEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCC
Q psy2222 57 KDIVGA-ISIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAV 134 (264)
Q Consensus 57 ~dI~Gp-~~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~ 134 (264)
..+.|. ..|.+.+|-||.-+.+|...-. .+..++.-+|.+..+.-+.|+||+ ..|+||+.|+.|.|.+. ...
T Consensus 6 ~~l~g~~~~Ly~r~g~~LqI~~dG~V~Gt-----~~~~~~~sile~~sv~~g~V~I~gv~s~~YLcMn~~G~Lygs-~~~ 79 (144)
T 1q1u_A 6 PQLKGIVTRLFSQQGYFLQMHPDGTIDGT-----KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSS-DVF 79 (144)
T ss_dssp CCCCCEEEEEEETTTEEEEECTTSCEEEE-----SCTTSGGGCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEE-SSC
T ss_pred chhcCceEEEEEcCCeEEEECCCCcEeee-----cCCCCCceeEEEEeccCCEEEEEEcccCcEEEEcCCCCEEec-ccC
Confidence 344453 4678888999999999965541 233456678888888778999999 69999999999999996 567
Q ss_pred CCCCceEEEEeCCce-EEecc--------CceeEEEecCCCeeEEecc-cCCCcceEEEEE
Q psy2222 135 GPLEQWEPVFEDDNM-ALLGA--------NQCFMSVSEQDDSIVATSR-KAGKNEMVKLRS 185 (264)
Q Consensus 135 g~~E~f~iv~~~g~~-alq~~--------ng~fLs~~~~~~~l~a~s~-~~g~~e~~~iR~ 185 (264)
++...|.=.+.++.| +..+. .+.||+++..|....+... .-.....|-+|.
T Consensus 80 s~eC~F~E~~~eN~YntY~S~~y~~~~~~r~~yvalnk~G~~r~G~~t~~~~~~~hFLpr~ 140 (144)
T 1q1u_A 80 TPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKP 140 (144)
T ss_dssp CGGGCEEEEEETTTEEEEEEEEEECTTTCCEEECCBCTTSBBCCGGGCCTTSGGGCEEEEE
T ss_pred CCCceEEEeeccCCceEEEEeeccCCCCCceEEEEECCCCCEecCcccCCCCceeeeEeee
Confidence 777888655554433 33331 3789999988863333222 223556677764
No 14
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=97.12 E-value=0.0027 Score=57.41 Aligned_cols=77 Identities=19% Similarity=0.238 Sum_probs=62.6
Q ss_pred eEEEEecC-CeEEEEecC-----CcEEEeccC-CCCCCceEEEEe---CCceEEecc-CceeEEEe-cCCCeeEEecccC
Q psy2222 108 KVAFKSGF-DKYLSIDKN-----GRVTGRSDA-VGPLEQWEPVFE---DDNMALLGA-NQCFMSVS-EQDDSIVATSRKA 175 (264)
Q Consensus 108 ~~~lKs~~-GkYLs~d~~-----G~v~a~a~a-~g~~E~f~iv~~---~g~~alq~~-ng~fLs~~-~~~~~l~a~s~~~ 175 (264)
-++|||-+ |+||---.+ |.|.++++. .+|..+|++++. +|.++|+++ ||+|..-. +++.-|+|+++.+
T Consensus 6 ~~~lKs~~~~kYL~~~~d~~~~~G~l~f~~~~~~sp~t~~eve~~k~~~g~vhIR~~~n~kyW~R~~~~~~wIvA~~~ep 85 (303)
T 1jlx_A 6 IMCLKSNNHQKYLRYQSDNIQQYGLLQFSADKILDPLAQFEVEPSKTYDGLVHIKSRYTNKYLVRWSPNHYWITASANEP 85 (303)
T ss_dssp EEEEEETTTTEEEEECCSSSTTTTBEEEEESSTTCTTCCEEEEECSSSTTCEEEEETTTCCEEEESSTTCCBEEEEESSC
T ss_pred EEEEeecCccceeEEeccccccccEEEEcCccCCCCcccEEEEEeecCCCEEEEEecCCCceeeecCCCCceEEecCCCC
Confidence 38999966 999999888 999999998 999999999985 599999999 99999995 4444488886664
Q ss_pred CC------cceEEEE
Q psy2222 176 GK------NEMVKLR 184 (264)
Q Consensus 176 g~------~e~~~iR 184 (264)
.+ .+.|++-
T Consensus 86 ~ed~d~~~ctlFkp~ 100 (303)
T 1jlx_A 86 DENKSNWACTLFKPL 100 (303)
T ss_dssp CCCTTSTTCCCEEEE
T ss_pred CcccCcccccceEEE
Confidence 32 3556554
No 15
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=97.07 E-value=0.011 Score=49.20 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=88.7
Q ss_pred cCCCCCC----EEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCC-eEEEEe-cCCeEEEEecCCcEE
Q psy2222 56 IKDIVGA----ISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDS-KVAFKS-GFDKYLSIDKNGRVT 128 (264)
Q Consensus 56 ~~dI~Gp----~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt-~~~lKs-~~GkYLs~d~~G~v~ 128 (264)
.+++.|+ ..|.+.. |-+|..+.+|..... .+..++.-+|.+..++-+ .|+||+ ..|+||+.|+.|.|.
T Consensus 21 ~~~~~~~~~R~~qLY~rt~g~~LqI~~dG~V~Gt-----~~~~~~~s~L~~~s~~~g~~V~I~gv~s~~YLcMn~~G~Ly 95 (164)
T 2fdb_M 21 TDQLSRRLIRTYQLYSRTSGKHVQVLANKRINAM-----AEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGKLI 95 (164)
T ss_dssp CCSSSCCCEEEEEEEETTTSSEEEECTTSCEEEE-----ECTTCGGGCEEEEEEETTTEEEEEETTTCCEEEECTTSCEE
T ss_pred ccccCCCcceEEEEEEccCCeEEEECCCCcEEee-----ccCCCcceEEEEEEeccceEEEEEEeccCcEEEEcCCCCEe
Confidence 4555653 4677886 899999999966542 223455666766665555 899999 699999999999999
Q ss_pred EeccCCCCCCceEEEEeC-CceEEecc--CceeEEEecCCCeeEEeccc-CCCcceEEEEEc
Q psy2222 129 GRSDAVGPLEQWEPVFED-DNMALLGA--NQCFMSVSEQDDSIVATSRK-AGKNEMVKLRSN 186 (264)
Q Consensus 129 a~a~a~g~~E~f~iv~~~-g~~alq~~--ng~fLs~~~~~~~l~a~s~~-~g~~e~~~iR~~ 186 (264)
+.....+....|.=.+.+ +=-++.+. .+.||+++..|....+.... -.....|-+|+.
T Consensus 96 gs~~~~~~eC~F~E~~~eN~Ynty~S~~~~~~yvaLnk~Grpr~g~rt~~~q~~~hFLpr~~ 157 (164)
T 2fdb_M 96 AKSNGKGKDCVFTEIVLENNYTALQNAKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLP 157 (164)
T ss_dssp EESCCCSGGGEEEEEECTTSCEEEEESSSTTCBCCBCTTSCBCCGGGCCTTSGGGCEEEECC
T ss_pred ecCcCCCCCCEEEEEeccCCcEEEEEcccCCEEEEECCCCCCccCCcCCCCCceeeeEccCC
Confidence 988778888888555554 43345543 58999999988634443322 235677888754
No 16
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=96.94 E-value=0.0088 Score=48.94 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=63.3
Q ss_pred eEEEEecC-CeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEE
Q psy2222 108 KVAFKSGF-DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 108 ~~~lKs~~-GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR 184 (264)
..+|=+.+ |.||-+..+|.|.++.+.-++...|+++.. .|.++|++. .+.||+++..|. |.+.. ..+.+..|.=+
T Consensus 17 ~~qLY~r~~g~~LqI~~dG~V~Gt~~~~~~~s~l~i~sv~~G~V~I~gv~s~~YLcMn~~G~-Lygs~-~~t~eC~F~E~ 94 (146)
T 1rg8_A 17 PKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGL-LYGSQ-TPNEECLFLER 94 (146)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSC-EEEES-SCCGGGCEEEE
T ss_pred EEEEEEcCCCEEEEECCCCcEeeeccCCCCceEEEEEeecCCeEEEEEcccCcEEEECCCCC-EeecC-CCCCCceEEEE
Confidence 46666766 999999999999999999899999999877 689999996 899999999997 87743 45666666655
Q ss_pred Ec
Q psy2222 185 SN 186 (264)
Q Consensus 185 ~~ 186 (264)
+.
T Consensus 95 ~~ 96 (146)
T 1rg8_A 95 LE 96 (146)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 17
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=96.91 E-value=0.011 Score=53.49 Aligned_cols=100 Identities=16% Similarity=0.202 Sum_probs=77.3
Q ss_pred CEEEEeCC---CcEEEEcCC-----CceEeeccCCCCCCCCccccEEEEEec--CCeEEEEec-CCeEEEE--ecCCcEE
Q psy2222 62 AISIEFGK---RTFVSALDN-----GLFILGAIHEDKEGPSPEEIFTAILVN--DSKVAFKSG-FDKYLSI--DKNGRVT 128 (264)
Q Consensus 62 p~~i~~~s---~~yL~a~~~-----G~f~~~~~~~~~e~~~~~evf~~~~v~--dt~~~lKs~-~GkYLs~--d~~G~v~ 128 (264)
|.++.|+| +.||.-... |.+++... +..+|.-.|.+++.. ++.|.+|+. +|||+.- +...=|+
T Consensus 4 Pr~~~lKs~~~~kYL~~~~d~~~~~G~l~f~~~----~~~sp~t~~eve~~k~~~g~vhIR~~~n~kyW~R~~~~~~wIv 79 (303)
T 1jlx_A 4 PVIMCLKSNNHQKYLRYQSDNIQQYGLLQFSAD----KILDPLAQFEVEPSKTYDGLVHIKSRYTNKYLVRWSPNHYWIT 79 (303)
T ss_dssp CSEEEEEETTTTEEEEECCSSSTTTTBEEEEES----STTCTTCCEEEEECSSSTTCEEEEETTTCCEEEESSTTCCBEE
T ss_pred ceEEEEeecCccceeEEeccccccccEEEEcCc----cCCCCcccEEEEEeecCCCEEEEEecCCCceeeecCCCCceEE
Confidence 67778877 889887666 87777222 347889999999943 348999997 9999999 5667799
Q ss_pred EeccCCCC------CCceEEEEe----CCceEEecc-CceeEEEecCC
Q psy2222 129 GRSDAVGP------LEQWEPVFE----DDNMALLGA-NQCFMSVSEQD 165 (264)
Q Consensus 129 a~a~a~g~------~E~f~iv~~----~g~~alq~~-ng~fLs~~~~~ 165 (264)
|+++.+.. -..|.|+.- .|+++||.. .|.||..-..+
T Consensus 80 A~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~ 127 (303)
T 1jlx_A 80 ASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVG 127 (303)
T ss_dssp EEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCS
T ss_pred ecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecC
Confidence 99765542 467999975 489999986 89999987655
No 18
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=96.87 E-value=0.0043 Score=50.42 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=74.1
Q ss_pred CCCCC----CEEEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEec
Q psy2222 57 KDIVG----AISIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRS 131 (264)
Q Consensus 57 ~dI~G----p~~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a 131 (264)
+.+.| +..|.+.+|-||.-+.+|...-. .+..++..+|.+..+.-+.|+|++ ..|+||+.|+.|.|.+..
T Consensus 3 ~hl~G~~~R~~~LY~r~g~~L~I~~dG~V~Gt-----~~~~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~Lygs~ 77 (140)
T 1qql_A 3 DYMEGGDIRVRRLFCRTQWYLRIDKRGKVKGT-----QEMRNSYNIMEIRTVAVGIVAIKGVESEYYLAMNKEGKLYAKQ 77 (140)
T ss_dssp ------CEEEECCEETTTEEEEECTTCCEEEE-----SCTTCSTTCEEEEEEETTEEEEEETTTCCCCEECTTSCEECCS
T ss_pred ccccCceeEEEEEEecCCeEEEECCCCeEEee-----cCCCCCceEEEEEeecCCEEEEEEcccCcEEEEcCCCCEEecc
Confidence 45566 34677778889999999865541 334466778888888888999999 589999999999999966
Q ss_pred cCCCCCCceEEEEeCCce-EEecc-C---ceeEEEecCCC
Q psy2222 132 DAVGPLEQWEPVFEDDNM-ALLGA-N---QCFMSVSEQDD 166 (264)
Q Consensus 132 ~a~g~~E~f~iv~~~g~~-alq~~-n---g~fLs~~~~~~ 166 (264)
. .++...|.=.+.++.| +..+. + +.||+++..|.
T Consensus 78 ~-~~~eC~F~E~~~en~Yn~Y~S~~~~~r~~yval~k~G~ 116 (140)
T 1qql_A 78 T-PNEECLFLERLEENHYNTYISKKHAEKNWFVGLKKNGS 116 (140)
T ss_dssp S-CCGGGEEEEEECSSSCEEEEESTTTTTTCBCCBCTTSC
T ss_pred c-CCCCCeEEEEEccCCcEEEEEeecCCCCEEEEECCCCC
Confidence 5 6677777554544433 35443 3 78999988885
No 19
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=96.82 E-value=0.016 Score=48.71 Aligned_cols=117 Identities=14% Similarity=0.183 Sum_probs=83.5
Q ss_pred EEEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCceE
Q psy2222 63 ISIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWE 141 (264)
Q Consensus 63 ~~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~ 141 (264)
..|.+.++-+|.-+.+|...-. .+..++..+|.+..+.-+.|+||+ ..|+|||.|+.|.|.+ +...++...|.
T Consensus 30 ~qLY~r~g~~LqI~~dG~V~Gt-----~~~~s~~silei~sv~~g~V~I~gv~s~~YLcMn~~G~Lyg-s~~~t~eC~F~ 103 (174)
T 1ihk_A 30 RQLYCRTGFHLEIFPNGTIQGT-----RKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYG-SEKLTQECVFR 103 (174)
T ss_dssp EEEEETTSCEEEECTTSCEEEE-----SSTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTCCEEE-ESSCCGGGCEE
T ss_pred EEEEecCCcEEEECCCCcEEee-----cCCCCCcceEEEEeccCceEEEEEcccCcEEEEcCCCCEec-cccCCCCceeE
Confidence 4688888888999998865541 234567788888888888999999 6899999999999999 56677878885
Q ss_pred EEEeCCce-EEecc--------CceeEEEecCCCeeEEec-ccCCCcceEEEEE
Q psy2222 142 PVFEDDNM-ALLGA--------NQCFMSVSEQDDSIVATS-RKAGKNEMVKLRS 185 (264)
Q Consensus 142 iv~~~g~~-alq~~--------ng~fLs~~~~~~~l~a~s-~~~g~~e~~~iR~ 185 (264)
=.+.++.| +..+. .+.||+++..|....+.. ..-.....|-+|.
T Consensus 104 E~~~eN~YntY~S~~y~~~~~~r~~yvaLnk~Grprrg~rtk~~q~~~hFLpr~ 157 (174)
T 1ihk_A 104 EQFEENWYNTYSSNLYKHVDTGRRYYVALNKDGTPREGTRTKRHQKFTHFLPRP 157 (174)
T ss_dssp EEEEETTEEEEEEEEEECTTTCCEEECCBCTTSCBCCGGGCCTTSGGGCEEEEC
T ss_pred EEEccCCceEEEeccccCCCCCceEEEEECCCCCCccccccCCCCeeeEEEecc
Confidence 55553333 34332 268999998875333322 2234567777773
No 20
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=96.79 E-value=0.017 Score=47.15 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=63.2
Q ss_pred eEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 108 KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 108 ~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
..+|=+.+|.||-+..+|.|.++.+.-++...|+++.. .|.++|++. .+.||+++..|. |.+.. ..+++..|.=++
T Consensus 16 ~~~LY~~~g~~LqI~~dG~V~Gt~~~~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~-Lygs~-~~~~eC~F~E~~ 93 (145)
T 1nun_A 16 WRKLFSFTKYFLKIEKNGKVSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGK-LYGSK-EFNNDCKLKERI 93 (145)
T ss_dssp EEEEEETTSCEEEECTTSCEEEECCSCCTTSCEEEEEEETTEEEEEETTTTEEEEECTTSB-EEEES-SCCTTSEEEEEE
T ss_pred EEEEEEcCCeEEEECCCCcEeeecCCCCCceeEEEEEecCCeEEEEEcccCcEEEEcCCCC-EeecC-CCCCCcEEEEEE
Confidence 46777878999999999999999999899999999877 589999986 899999999997 77743 455666665554
No 21
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=96.75 E-value=0.023 Score=46.25 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=61.1
Q ss_pred cEEEEEecCCeEEEEecC-CeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecc
Q psy2222 98 IFTAILVNDSKVAFKSGF-DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSR 173 (264)
Q Consensus 98 vf~~~~v~dt~~~lKs~~-GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~ 173 (264)
.|.+.+..-...+|=+.. |.||-++++|.|.++.+.-.+.-.|++... .|.++|+.. .|.||+++++|. |.++..
T Consensus 22 ~~~~~~~~~~~~~LYcr~~g~~LqI~~dG~V~Gt~~~~~~~s~lei~sv~~G~V~L~g~~sg~yL~mn~~G~-l~Gs~~ 99 (142)
T 3p6j_A 22 QFQISPEGNGEVLLKSTETGQYLRINPDGTVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRD 99 (142)
T ss_dssp CEEEEECSTTCEEEEETTTCCEEEECTTSBEEEECCTTCGGGCEEEEEEETTEEEEEETTTTEEEEECTTSB-EEEECC
T ss_pred EEEECcccCcEEEEEEeCCCEEEEECCCCCEeeecCCCCCceEEEEEEccCCEEEEEEecCCEEEeECCCCC-Eeeccc
Confidence 455555433467777765 999999999999999988889999999876 689999976 899999999997 877644
No 22
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=96.69 E-value=0.015 Score=47.47 Aligned_cols=76 Identities=11% Similarity=0.131 Sum_probs=62.1
Q ss_pred eEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 108 KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 108 ~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
..+|=+.+|.||-+..+|.|.++.+.-++...|+++.. .|.++|+.. .+.||+.+..|. |.+. ...+.+..|.=++
T Consensus 12 ~~~Ly~r~g~~LqI~~dG~V~Gt~~~~~~~sile~~sv~~g~V~I~gv~s~~YLcMn~~G~-Lygs-~~~s~eC~F~E~~ 89 (144)
T 1q1u_A 12 VTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGY-LYSS-DVFTPECKFKESV 89 (144)
T ss_dssp EEEEEETTTEEEEECTTSCEEEESCTTSGGGCEEEEEEETTEEEEEETTTCCEEEECTTSC-EEEE-SSCCGGGCEEEEE
T ss_pred eEEEEEcCCeEEEECCCCcEeeecCCCCCceeEEEEeccCCEEEEEEcccCcEEEEcCCCC-EEec-ccCCCCceEEEee
Confidence 35677778999999999999999998888999998876 588999986 899999999997 7774 3455556665554
No 23
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=96.60 E-value=0.0096 Score=48.35 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=62.3
Q ss_pred eEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 108 KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 108 ~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
..+|=+.+|.||-+.++|.|.++.+.-++...|+++.. .|.++|++. .+.||+.+..|. |.+... .+.+..|.=++
T Consensus 12 ~~~LY~r~g~~L~I~~dG~V~Gt~~~~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~-Lygs~~-~~~eC~F~E~~ 89 (140)
T 1qql_A 12 VRRLFCRTQWYLRIDKRGKVKGTQEMRNSYNIMEIRTVAVGIVAIKGVESEYYLAMNKEGK-LYAKQT-PNEECLFLERL 89 (140)
T ss_dssp EECCEETTTEEEEECTTCCEEEESCTTCSTTCEEEEEEETTEEEEEETTTCCCCEECTTSC-EECCSS-CCGGGEEEEEE
T ss_pred EEEEEecCCeEEEECCCCeEEeecCCCCCceEEEEEeecCCEEEEEEcccCcEEEEcCCCC-EEeccc-CCCCCeEEEEE
Confidence 35666777999999999999999999899999999876 689999986 899999999987 776433 55666666554
No 24
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=96.56 E-value=0.021 Score=45.78 Aligned_cols=64 Identities=22% Similarity=0.359 Sum_probs=55.0
Q ss_pred EEEEe-cCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecc
Q psy2222 109 VAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSR 173 (264)
Q Consensus 109 ~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~ 173 (264)
+-|+. .+|.||-++++|.|.++.+.-++...|++..- -|.++|+.. .|.||+++++|. |.++..
T Consensus 8 ~~~~~~~~g~~L~I~~dG~V~Gt~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~~G~-v~Gs~~ 74 (132)
T 3q7x_A 8 VLLRSTETGQFLRINPDGTVDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPDGT-VDGTRD 74 (132)
T ss_dssp EEEEETTTCCEEEECTTSBEEEECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSB-EEEECC
T ss_pred heeeeccCcEEEEECCCCcEEeecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECCCCC-EeeccC
Confidence 55665 58999999999999999998899999999876 599999986 899999999987 777543
No 25
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=96.56 E-value=0.019 Score=46.87 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=62.5
Q ss_pred eEEEEecC-CeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEE
Q psy2222 108 KVAFKSGF-DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 108 ~~~lKs~~-GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR 184 (264)
..+|=+.+ |.||-+..+|.|.++.+.-.+...|+++.. .|.++|+.. .+.||+++..|. |.+... .+.+..|.=+
T Consensus 20 ~~rLY~r~~g~~LqI~~dG~V~Gt~~~~~~~s~l~i~sv~~G~V~I~gv~s~~YLcMn~~G~-Lygs~~-~t~eC~F~E~ 97 (146)
T 1bfg_A 20 PKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVSANRYLAMKEDGR-LLASKS-VTDECFFFER 97 (146)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEECCTTCGGGCEEEEECSTTEEEEEETTTTEEEEECTTSC-EEEESS-CCGGGCEEEE
T ss_pred cEEEEEcCCCEEEEECCCCeEEeecCCCCCceEEEEEeccCCEEEEEEcccCcEEEEcCCCC-Eecccc-CCCCceEEEE
Confidence 45666665 899999999999999998888999999877 589999986 899999999997 877543 5666666655
Q ss_pred Ec
Q psy2222 185 SN 186 (264)
Q Consensus 185 ~~ 186 (264)
+.
T Consensus 98 ~~ 99 (146)
T 1bfg_A 98 LE 99 (146)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 26
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=96.56 E-value=0.037 Score=44.13 Aligned_cols=115 Identities=10% Similarity=0.071 Sum_probs=78.7
Q ss_pred EEEEeCC--CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCc
Q psy2222 63 ISIEFGK--RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQ 139 (264)
Q Consensus 63 ~~i~~~s--~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~ 139 (264)
..|.+.+ |-||.-+.+|...-.. + .++..+|.+..+.-+.|+|++ ..|+||+.|+.|.|.+... .++...
T Consensus 6 ~~LY~~~~~g~~LqI~~dG~V~Gt~-----~-~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~Lygs~~-~~~eC~ 78 (128)
T 1ijt_A 6 RRLYCNVGIGFHLQALPDGRIGGAH-----A-DTRDSLLELSPVERGVVSIFGVASRFFVAMSSKGKLYGSPF-FTDECT 78 (128)
T ss_dssp EEEEECSTTCEEEEECTTSCEEEES-----S-CCGGGCEEEEEEETTEEEEEETTTTEEEEECTTCCEEEESS-CCTTSE
T ss_pred EEEEEecCCCeEEEECCCCcEeccc-----C-CCccceEEEEeccCCEEEEEEcccCcEEEEcCCCCEEcccc-cCCCce
Confidence 4677777 6889998888654421 1 223678888888878999999 6899999999999999664 677777
Q ss_pred eEEEEeC-CceEEecc-C-ceeEEEecCCCeeEEeccc-CCCcceEEEE
Q psy2222 140 WEPVFED-DNMALLGA-N-QCFMSVSEQDDSIVATSRK-AGKNEMVKLR 184 (264)
Q Consensus 140 f~iv~~~-g~~alq~~-n-g~fLs~~~~~~~l~a~s~~-~g~~e~~~iR 184 (264)
|.=.+.+ +=-+..+. + +.||+++..|....+.... -.....|-+|
T Consensus 79 F~E~~~en~Yn~Y~S~~~~~~yval~k~G~~r~g~~t~~~~~~~hFlpr 127 (128)
T 1ijt_A 79 FKEILLPNNYNAYESYKYPGMFIALGKNGKTKKGNRVSPTMKVTHFLPR 127 (128)
T ss_dssp EEEEECGGGCEEEEESSSTTCBCCBCTTSSBCCGGGCCTTSGGGCEEEE
T ss_pred EEEEEccCCcEEEEECCCCCEEEEECCCCCCccCCccCCCCceeeeEec
Confidence 7554543 33344443 4 8899999888633343222 2344556554
No 27
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=96.54 E-value=0.019 Score=48.33 Aligned_cols=76 Identities=13% Similarity=0.155 Sum_probs=62.1
Q ss_pred eEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 108 KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 108 ~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
.++|=+.+|.||-+..+|.|.++.+.-++...|+++.. .|.++|+.. .+.||+++..|. |.+ +...+.+..|.=++
T Consensus 29 ~~qLY~r~g~~LqI~~dG~V~Gt~~~~s~~silei~sv~~g~V~I~gv~s~~YLcMn~~G~-Lyg-s~~~t~eC~F~E~~ 106 (174)
T 1ihk_A 29 RRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGE-LYG-SEKLTQECVFREQF 106 (174)
T ss_dssp EEEEEETTSCEEEECTTSCEEEESSTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTCC-EEE-ESSCCGGGCEEEEE
T ss_pred EEEEEecCCcEEEECCCCcEEeecCCCCCcceEEEEeccCceEEEEEcccCcEEEEcCCCC-Eec-cccCCCCceeEEEE
Confidence 56787878999999999999999988889999999876 689999986 899999999997 777 34455555555443
No 28
>1hcd_A Hisactophilin; actin binding; NMR {Dictyostelium discoideum} SCOP: b.42.5.2 PDB: 1hce_A
Probab=96.35 E-value=0.031 Score=42.37 Aligned_cols=71 Identities=15% Similarity=0.236 Sum_probs=51.9
Q ss_pred EEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEeCCceEEeccCceeEEEecCCCeeEEecccCCCcceE
Q psy2222 109 VAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFEDDNMALLGANQCFMSVSEQDDSIVATSRKAGKNEMV 181 (264)
Q Consensus 109 ~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~~g~~alq~~ng~fLs~~~~~~~l~a~s~~~g~~e~~ 181 (264)
-+||+++|-||+++.+ .|-.--.--....-|-++...++++|++.-|+|+++....+ +.-.----|+-..|
T Consensus 4 rafk~hhgh~lsae~~-~vkthhghhdhhthfhvenhg~kvalrth~gkyvsigdhkq-vylshh~hg~hslf 74 (118)
T 1hcd_A 4 RAFKSHHGHFLSAEGE-AVKTHHGHHDHHTHFHVENHGGKVALKTHCGKYLSIGDHKQ-VYLSHHLHGDHSLF 74 (118)
T ss_dssp SEEESSTTCEEEEETT-EEEEECSCSSCCCCCEEEEETTEEEEESSSSCEEEEEETTE-EEEECCCSSSSSSB
T ss_pred chhhhccCeeeecccc-ccccccCcccccceEEeecCCceEEEEeccCcEEEecCCce-EEEEeeecCcceeE
Confidence 3799999999999877 44444444556778999888999999999999999977654 54433333444444
No 29
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=96.31 E-value=0.074 Score=43.26 Aligned_cols=65 Identities=22% Similarity=0.331 Sum_probs=56.2
Q ss_pred eEEEEecC-CeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecc
Q psy2222 108 KVAFKSGF-DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSR 173 (264)
Q Consensus 108 ~~~lKs~~-GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~ 173 (264)
..+|=+.+ |.||-+.++|.|.++.+.-++...|++... -|.++|+.. .|.||+++.+|. |.+...
T Consensus 42 ~r~LYcr~~g~hLqI~~dG~V~Gt~~~~s~~s~Lei~sv~~GvV~I~Gv~tg~yL~Mn~dG~-l~Gs~~ 109 (142)
T 3p6i_A 42 EVLLKSTETGQYLRINPDGTVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRD 109 (142)
T ss_dssp CEEEEETTTCCEEEECTTSBEEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSB-EEEECC
T ss_pred eEEEEEcCCCEEEEECCCCcCcCcCCCCCCceEEEEEeccCCEEEEEEecCceEEeECCCCC-CccccC
Confidence 56777766 999999999999999998899999999876 589999985 789999999997 777544
No 30
>3f1r_A FGF-20, fibroblast growth factor 20; beta-trefoil fold, polymorphism, secreted, hormone; 2.50A {Homo sapiens}
Probab=96.27 E-value=0.054 Score=46.84 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=81.9
Q ss_pred EEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCceEE
Q psy2222 64 SIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWEP 142 (264)
Q Consensus 64 ~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~i 142 (264)
.|.+..+-||.-+.+|...-. .+..++.-+|.+..+.-+.|+||+ ..|+||+.|+.|.|.+ +...++...|.=
T Consensus 68 qLYcrtg~hLqI~~dG~V~GT-----~~~~s~yslLei~sv~~G~V~IkGv~S~~YLcMn~~G~LYg-s~~~s~eC~F~E 141 (211)
T 3f1r_A 68 QLYCRTGFHLQILPDGSVQGT-----RQDHSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGELYG-SEKLTSECIFRE 141 (211)
T ss_dssp EEEETTTEEEEECTTSCEEEE-----SCTTCSSSEEEEEEEETTEEEEEETTTCCEEEECTTSCEEE-ESSCCGGGCEEE
T ss_pred EEEEcCCeEEEECCCCcEEec-----cCCCCCcceeeEEeccCCEEEEEEeecceEEEECCCCCCcc-cCCCCCCeeEEE
Confidence 577777778888888865441 233456678888888878999999 6899999999999998 667778888864
Q ss_pred EEe-CCceEEecc--------CceeEEEecCCCeeEEec-ccCCCcceEEEEEc
Q psy2222 143 VFE-DDNMALLGA--------NQCFMSVSEQDDSIVATS-RKAGKNEMVKLRSN 186 (264)
Q Consensus 143 v~~-~g~~alq~~--------ng~fLs~~~~~~~l~a~s-~~~g~~e~~~iR~~ 186 (264)
.+. ++=-+..+. .+.||+++..|....+.. ..-.....|-+|..
T Consensus 142 ~i~EN~YntY~S~~y~~~~~gr~wYVaLnk~GrprrG~ktk~~q~~tHFLPr~v 195 (211)
T 3f1r_A 142 QFEENWYNTYSSNIYKHGDTGRRYFVALNKDGTPRDGARSKRHQKFTHFLPRPV 195 (211)
T ss_dssp EEEETTEEEEEEEEEECTTTCCEEECCBCTTSSBCCGGGCCTTSGGGCEEEECC
T ss_pred EEccCCceEEEeccccCCCCCceEEEEECCCCCCcccCCCCCCCeeeeEECCCC
Confidence 444 432233332 258999998886334432 22345677888754
No 31
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=96.27 E-value=0.11 Score=42.78 Aligned_cols=119 Identities=11% Similarity=0.090 Sum_probs=80.7
Q ss_pred CEEEEeC---CCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCC-
Q psy2222 62 AISIEFG---KRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGP- 136 (264)
Q Consensus 62 p~~i~~~---s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~- 136 (264)
.+.|.+. ++-||.-+.+|...-. .+ .++.-+|.+..+.-+.|+||+ ..|+||+.|+.|.|.+. ...++
T Consensus 15 ~~~LY~~~~rtg~~LqI~~dG~V~Gt-----~d-~~~~s~Lei~sv~~g~V~Ikgv~s~~YLcMn~~G~Lygs-~~~t~e 87 (155)
T 2p39_A 15 LIHLYTATARNSYHLQIHKNGHVDGA-----PH-QTIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGNIFGS-HYFDPE 87 (155)
T ss_dssp CEEEECTTSSSCCEEEECTTSCEEEE-----SS-CCTTTCEEEEECGGGEEEEEETTTTEEEEECTTSCEEEE-SSCCTT
T ss_pred EEEEEEccCCCceEEEECCCCcEeCc-----cC-CCCcEEEEEEeecCCEEEEEEeccCcEEEECCCCCEeec-CccCcC
Confidence 5678884 5889999999965442 12 255677777877777999999 68999999999999995 44554
Q ss_pred CCceEEEEeCCce-EEecc-CceeEEEecCCCeeEEecccCCCcceEEEEEccc
Q psy2222 137 LEQWEPVFEDDNM-ALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRSNSL 188 (264)
Q Consensus 137 ~E~f~iv~~~g~~-alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~~a~ 188 (264)
...|.=.+.++.| +..+. ++.||+....+. ..-......+...|-+|.+..
T Consensus 88 dC~F~E~~~eN~YntY~S~~y~~yval~r~gr-~~~~g~~~~~~shFLpr~~~v 140 (155)
T 2p39_A 88 NCRFQHQTLENGYDVYHSPQYHFLVSLGRAKR-AFLPGMNPPPYSQFLSRRNEI 140 (155)
T ss_dssp TSCEEEEECTTSCEEEECTTTCBBCCSSSCCC-BCCTTSCCCGGGCBEEEECCS
T ss_pred CcEEEEEEccCCcEEEEECccCeEEEeCCCCc-cccCCCCCCcceeeeccCCcc
Confidence 5777555554444 45553 688999865553 211122234556888886544
No 32
>3hbw_A Fibroblast growth factor 13; beta-trefoil fold, alternative splicing, polymorphism, hormone; 1.90A {Homo sapiens} PDB: 4dck_C
Probab=96.26 E-value=0.064 Score=45.79 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=83.5
Q ss_pred EEEeCCCcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCceEE
Q psy2222 64 SIEFGKRTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWEP 142 (264)
Q Consensus 64 ~i~~~s~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~i 142 (264)
.|.+.+|-||.-+.+|...-. .+..++..+|.+..+.-+.|+|++ ..|+||+.|..|.|.+. ...++...|.=
T Consensus 20 qLYcr~G~hLqI~~dG~V~GT-----~~~~s~~slLei~sv~~GvV~IkGv~S~~YLcMn~~G~Lygs-~~~s~eC~F~E 93 (193)
T 3hbw_A 20 KLYSRQGYHLQLQADGTIDGT-----KDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTS-ELFTPECKFKE 93 (193)
T ss_dssp EEEETTSCEEEECTTSCEEEE-----SCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEE-SSBCGGGEEEE
T ss_pred EEEEcCCeEEEEcCCCcEEcc-----cCCCCCceEEEEEeccCCEEEEEEeeceeEEEEcCCCCCccc-cCCCCCEEEEE
Confidence 678888899999999965542 233456678888888778999999 68999999999999984 55667777765
Q ss_pred EEeCCce-EEecc--------CceeEEEecCCCeeEEecc-cCCCcceEEEEEc
Q psy2222 143 VFEDDNM-ALLGA--------NQCFMSVSEQDDSIVATSR-KAGKNEMVKLRSN 186 (264)
Q Consensus 143 v~~~g~~-alq~~--------ng~fLs~~~~~~~l~a~s~-~~g~~e~~~iR~~ 186 (264)
.+.++.| ++.+. .+.||+++..|....+... .-.....|-+|..
T Consensus 94 ~i~EN~YntY~S~~y~~~~~gr~wYvaLnk~GrprrG~rtk~~q~~~hFLPr~v 147 (193)
T 3hbw_A 94 SVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPL 147 (193)
T ss_dssp EEETTTEEEEEEEEEECTTTCCEEECCBCTTSBBCCGGGCCTTSGGGCEEEEEE
T ss_pred EEccCCceEEEEecccCccCCccEEEEECCCCccccCCCcCCCceeeeeEcccc
Confidence 5544333 33332 3789999998863344332 2346688888854
No 33
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=96.22 E-value=0.039 Score=43.99 Aligned_cols=74 Identities=12% Similarity=0.087 Sum_probs=58.3
Q ss_pred EEEEecC--CeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEE
Q psy2222 109 VAFKSGF--DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 109 ~~lKs~~--GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR 184 (264)
.+|=+.+ |.||-+..+|.|.++.+. ++...|+++.. .|.++|++. .+.||+.+..|. |.+.. ..+++..|.=+
T Consensus 6 ~~LY~~~~~g~~LqI~~dG~V~Gt~~~-~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~-Lygs~-~~~~eC~F~E~ 82 (128)
T 1ijt_A 6 RRLYCNVGIGFHLQALPDGRIGGAHAD-TRDSLLELSPVERGVVSIFGVASRFFVAMSSKGK-LYGSP-FFTDECTFKEI 82 (128)
T ss_dssp EEEEECSTTCEEEEECTTSCEEEESSC-CGGGCEEEEEEETTEEEEEETTTTEEEEECTTCC-EEEES-SCCTTSEEEEE
T ss_pred EEEEEecCCCeEEEECCCCcEecccCC-CccceEEEEeccCCEEEEEEcccCcEEEEcCCCC-EEccc-ccCCCceEEEE
Confidence 4555655 899999999999999875 45888888876 589999986 899999999997 77754 34566666655
Q ss_pred E
Q psy2222 185 S 185 (264)
Q Consensus 185 ~ 185 (264)
+
T Consensus 83 ~ 83 (128)
T 1ijt_A 83 L 83 (128)
T ss_dssp E
T ss_pred E
Confidence 4
No 34
>3f1r_A FGF-20, fibroblast growth factor 20; beta-trefoil fold, polymorphism, secreted, hormone; 2.50A {Homo sapiens}
Probab=96.13 E-value=0.052 Score=46.94 Aligned_cols=76 Identities=12% Similarity=0.145 Sum_probs=62.9
Q ss_pred eEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 108 KVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 108 ~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
..+|=+.+|.||-+..+|.|.++.+.-++...|++... .|.++|+.. .+.||+.+..|. |.+ +...+.+..|+=++
T Consensus 66 ~rqLYcrtg~hLqI~~dG~V~GT~~~~s~yslLei~sv~~G~V~IkGv~S~~YLcMn~~G~-LYg-s~~~s~eC~F~E~i 143 (211)
T 3f1r_A 66 RRQLYCRTGFHLQILPDGSVQGTRQDHSLFGILEFISVAVGLVSIRGVDSGLYLGMNDKGE-LYG-SEKLTSECIFREQF 143 (211)
T ss_dssp EEEEEETTTEEEEECTTSCEEEESCTTCSSSEEEEEEEETTEEEEEETTTCCEEEECTTSC-EEE-ESSCCGGGCEEEEE
T ss_pred EEEEEEcCCeEEEECCCCcEEeccCCCCCcceeeEEeccCCEEEEEEeecceEEEECCCCC-Ccc-cCCCCCCeeEEEEE
Confidence 46777778999999999999999998889999999876 589999986 899999999997 777 44555566666554
No 35
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=96.09 E-value=0.056 Score=44.98 Aligned_cols=78 Identities=14% Similarity=0.203 Sum_probs=63.0
Q ss_pred eEEEEecC-CeEEEEecCCcEEEeccCCCCCCceEEEEe--CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEE
Q psy2222 108 KVAFKSGF-DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE--DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKL 183 (264)
Q Consensus 108 ~~~lKs~~-GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~--~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~i 183 (264)
..+|=+.+ |.||-+..+|.|.++.+.-.+...|++... ++.++|+.. .+.||+++..|. |.+.....+.+..|.=
T Consensus 31 ~~qLY~rt~g~~LqI~~dG~V~Gt~~~~~~~s~L~~~s~~~g~~V~I~gv~s~~YLcMn~~G~-Lygs~~~~~~eC~F~E 109 (164)
T 2fdb_M 31 TYQLYSRTSGKHVQVLANKRINAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGK-LIAKSNGKGKDCVFTE 109 (164)
T ss_dssp EEEEEETTTSSEEEECTTSCEEEEECTTCGGGCEEEEEEETTTEEEEEETTTCCEEEECTTSC-EEEESCCCSGGGEEEE
T ss_pred EEEEEEccCCeEEEECCCCcEEeeccCCCcceEEEEEEeccceEEEEEEeccCcEEEEcCCCC-EeecCcCCCCCCEEEE
Confidence 46677765 999999999999999998788887777654 348999986 899999999998 8887665677777766
Q ss_pred EEc
Q psy2222 184 RSN 186 (264)
Q Consensus 184 R~~ 186 (264)
++.
T Consensus 110 ~~~ 112 (164)
T 2fdb_M 110 IVL 112 (164)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
No 36
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=95.93 E-value=0.065 Score=43.44 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=50.6
Q ss_pred cCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecc
Q psy2222 114 GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSR 173 (264)
Q Consensus 114 ~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~ 173 (264)
..|.||-+.++|.|.++.+.-.+.-.|++... .|.++|+.. +|.||+++++|. |.++..
T Consensus 17 ~~g~~LqI~~dG~V~Gt~~~~~~~s~l~~~sv~~G~V~I~gv~sg~yL~m~~~G~-v~Gs~~ 77 (143)
T 3snv_A 17 KGGQYLRINPDGTVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRD 77 (143)
T ss_dssp --CCEEEECTTSBEEEESCTTCTTSEEEEEEEETTEEEEEETTTTEEEEECTTSB-EEEECC
T ss_pred cCCEEEEECCCCCEeeecCCCCCceEEEEEeccCCeEEEEEEcccEEEeECCCCC-Eeeccc
Confidence 47899999999999999988899999999877 589999985 899999999997 877644
No 37
>3hbw_A Fibroblast growth factor 13; beta-trefoil fold, alternative splicing, polymorphism, hormone; 1.90A {Homo sapiens} PDB: 4dck_C
Probab=95.90 E-value=0.056 Score=46.16 Aligned_cols=74 Identities=11% Similarity=0.139 Sum_probs=59.8
Q ss_pred EEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCCCcceEEEEE
Q psy2222 110 AFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 110 ~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g~~e~~~iR~ 185 (264)
+|=+.+|.||-++.+|.|.++.+.-.+...|++..- .|.++|+.. .+.||+.+..|. |.+. ...+.+..|.=++
T Consensus 20 qLYcr~G~hLqI~~dG~V~GT~~~~s~~slLei~sv~~GvV~IkGv~S~~YLcMn~~G~-Lygs-~~~s~eC~F~E~i 95 (193)
T 3hbw_A 20 KLYSRQGYHLQLQADGTIDGTKDEDSTYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGY-LYTS-ELFTPECKFKESV 95 (193)
T ss_dssp EEEETTSCEEEECTTSCEEEESCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSC-EEEE-SSBCGGGEEEEEE
T ss_pred EEEEcCCeEEEEcCCCcEEcccCCCCCceEEEEEeccCCEEEEEEeeceeEEEEcCCCC-Cccc-cCCCCCEEEEEEE
Confidence 566667999999999999999988889999999876 588999986 899999999997 7763 3344556665553
No 38
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=95.77 E-value=0.08 Score=43.65 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=58.7
Q ss_pred eEEEEe---cCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCC-CcceE
Q psy2222 108 KVAFKS---GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAG-KNEMV 181 (264)
Q Consensus 108 ~~~lKs---~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g-~~e~~ 181 (264)
..+|-+ -+|.||-+..+|.|.++.+. ++...|++... .|.++|+.. .|.||+.+..|. |.+.. ..+ ++..|
T Consensus 15 ~~~LY~~~~rtg~~LqI~~dG~V~Gt~d~-~~~s~Lei~sv~~g~V~Ikgv~s~~YLcMn~~G~-Lygs~-~~t~edC~F 91 (155)
T 2p39_A 15 LIHLYTATARNSYHLQIHKNGHVDGAPHQ-TIYSALMIRSEDAGFVVITGVMSRRYLCMDFRGN-IFGSH-YFDPENCRF 91 (155)
T ss_dssp CEEEECTTSSSCCEEEECTTSCEEEESSC-CTTTCEEEEECGGGEEEEEETTTTEEEEECTTSC-EEEES-SCCTTTSCE
T ss_pred EEEEEEccCCCceEEEECCCCcEeCccCC-CCcEEEEEEeecCCEEEEEEeccCcEEEECCCCC-EeecC-ccCcCCcEE
Confidence 355555 37999999999999999985 88899988876 589999986 899999999997 87743 333 35555
Q ss_pred EEEE
Q psy2222 182 KLRS 185 (264)
Q Consensus 182 ~iR~ 185 (264)
.=++
T Consensus 92 ~E~~ 95 (155)
T 2p39_A 92 QHQT 95 (155)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 39
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=95.71 E-value=0.074 Score=44.16 Aligned_cols=118 Identities=14% Similarity=0.078 Sum_probs=75.5
Q ss_pred EEEEeCCCc-----EEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCC
Q psy2222 63 ISIEFGKRT-----FVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGP 136 (264)
Q Consensus 63 ~~i~~~s~~-----yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~ 136 (264)
..|.+.++- ||.-..+|...-. . . .++.-+|.+..+.-+.|+||+ ..|+||+.|+.|.|.+... .++
T Consensus 11 ~~LY~~~~~g~~~~~LqI~~dG~V~Gt-~-d----~~~~siLei~sv~~g~V~I~gv~s~~YLcMn~~G~Lygs~~-~t~ 83 (162)
T 1pwa_A 11 RHLYTSGPHGLSSCFLRIRADGVVDCA-R-G----QSAHSLLEIKAVALRTVAIKGVHSVRYLCMGADGKMQGLLQ-YSE 83 (162)
T ss_dssp EEEEECCTTSCCCEEEEECTTSBEEEE-S-S----CCGGGCEEEEEEETTEEEEEETTTCCEEEECGGGCEEEESS-CCH
T ss_pred EEEEEccCCCCceeEEEECCCCcEeCC-c-C----CCCccEEEEEeecCCEEEEEEcccCcEEEEcCCCCEeecCc-CCC
Confidence 467777764 8999888865542 1 1 356678888888888999999 6999999999999999654 443
Q ss_pred -CCceEEEEeCCce-EEecc-CceeEEEecCCCeeEE-ecccCCCcceEEEEEccc
Q psy2222 137 -LEQWEPVFEDDNM-ALLGA-NQCFMSVSEQDDSIVA-TSRKAGKNEMVKLRSNSL 188 (264)
Q Consensus 137 -~E~f~iv~~~g~~-alq~~-ng~fLs~~~~~~~l~a-~s~~~g~~e~~~iR~~a~ 188 (264)
...|.=.+.++.| ++.+. ++.||.++..+. ... ..........|-+|....
T Consensus 84 ~eC~F~E~~~eN~YntY~S~~y~~yvaL~k~G~-~r~~k~k~~~~~~hFLpr~~~~ 138 (162)
T 1pwa_A 84 EDCAFEEEIRPDGYNVYRSEKHRLPVSLSSAKQ-RQLYKNRGFLPLSHFLPMLPMV 138 (162)
T ss_dssp HHHEEEEEECTTSCEEEEETTTTEECCCC--------------CTTCCBEEECCSS
T ss_pred CcceEEeeeccCCceEEEECcCCeEEEEcCCCC-cCCCCCCcCCcceeEEecCCCC
Confidence 4555444444444 45543 789999988775 322 223334567888886433
No 40
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=95.28 E-value=0.88 Score=36.34 Aligned_cols=90 Identities=19% Similarity=0.247 Sum_probs=62.5
Q ss_pred ccccEEEEEecCCeEEEEe-cCCeEEEEec----CCc-EEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCC-
Q psy2222 95 PEEIFTAILVNDSKVAFKS-GFDKYLSIDK----NGR-VTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQD- 165 (264)
Q Consensus 95 ~~evf~~~~v~dt~~~lKs-~~GkYLs~d~----~G~-v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~- 165 (264)
..|.|.+....++.|.|++ +.|++|.+.. +|. |.--.-.-++..+|.+... +|.|.|++. .|+.|.+.+..
T Consensus 62 ~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~~~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~ 141 (165)
T 3pg0_A 62 DNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENAST 141 (165)
T ss_dssp GGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEECSSSCEEEEETTTCCEEEEGGGCC
T ss_pred ccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCCccEEEEEECCCCEEEEEECCCCcEEEcCCCCC
Confidence 5799999999888999998 5689998853 333 4433444557889999987 589999985 78899886432
Q ss_pred ---CeeEEecccCCCcceEEEE
Q psy2222 166 ---DSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 166 ---~~l~a~s~~~g~~e~~~iR 184 (264)
..|.--.-.-+.+..|++-
T Consensus 142 ~~G~~v~~~~c~g~~nQ~W~~~ 163 (165)
T 3pg0_A 142 SDGANVIQYSYSGGDNQQWRLV 163 (165)
T ss_dssp STTCBEEEECCCCCGGGCEEEE
T ss_pred CCCCEEEEeCCCCCccceEEEE
Confidence 2243322233566777663
No 41
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=94.52 E-value=0.18 Score=42.96 Aligned_cols=116 Identities=14% Similarity=0.075 Sum_probs=79.2
Q ss_pred EEEEeCCCc-----EEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCC
Q psy2222 63 ISIEFGKRT-----FVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGP 136 (264)
Q Consensus 63 ~~i~~~s~~-----yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~ 136 (264)
..|.+.++- ||.-..+|...-. . . .++.-+|.+..+.-+.|+||+ ..|+|||.|+.|.|.+.. ..++
T Consensus 23 ~qLY~rtg~g~~~~~LqI~~dG~V~Gt-~-d----~s~~siLei~sv~~G~V~IkGv~S~~YLcMn~~G~LYgs~-~~t~ 95 (194)
T 2p23_A 23 RHLYTSGPHGLSSCFLRIRADGVVDCA-R-G----QSAHSLLEIKAVALRTVAIKGVHSVRYLCMGADGKMQGLL-QYSE 95 (194)
T ss_dssp EEEEEECTTSCCEEEEEECTTSBEEEE-S-S----CCTTTCEEEEEEETTEEEEEETTTCCEEEECGGGCEEEES-SCCH
T ss_pred EEEEEccCCCCcceEEEECCCCcEeCc-c-C----CCcccEEEEEeccCCEEEEEEcccCcEEEECCCCCEeecC-cCCc
Confidence 457777664 8888888865542 1 1 245667888888778999999 689999999999999954 4553
Q ss_pred -CCceEEEEeCCce-EEecc-CceeEEEecCCCeeEE-ecccCCCcceEEEEEc
Q psy2222 137 -LEQWEPVFEDDNM-ALLGA-NQCFMSVSEQDDSIVA-TSRKAGKNEMVKLRSN 186 (264)
Q Consensus 137 -~E~f~iv~~~g~~-alq~~-ng~fLs~~~~~~~l~a-~s~~~g~~e~~~iR~~ 186 (264)
...|.=.+.++.| +..+. ++.||.++..+. ... ..........|-+|..
T Consensus 96 ~eC~F~E~i~EN~YntY~S~~y~~yvaLnk~G~-~r~~k~k~~~~~~hFLPr~~ 148 (194)
T 2p23_A 96 EDCAFEEEIRPDGYNVYRSEKHRLPVSLSSAKQ-RQLYKNRGFLPLSHFLPMLP 148 (194)
T ss_dssp HHHEEEEEECTTSCEEEEETTTTEECCCCCTTG-GGHHHHTSCCTTCCBEEECC
T ss_pred CCcEEEEEeccCCcEEEEECCCCEEEEEeCCCC-CCCCCCCCCCcceeEEecCC
Confidence 5556444454443 44443 789999988875 222 1233345688888865
No 42
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=94.34 E-value=0.27 Score=41.93 Aligned_cols=74 Identities=9% Similarity=0.059 Sum_probs=55.7
Q ss_pred EEEEecCC-----eEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCC-Ccce
Q psy2222 109 VAFKSGFD-----KYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAG-KNEM 180 (264)
Q Consensus 109 ~~lKs~~G-----kYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g-~~e~ 180 (264)
.+|=+.+| .||-+..+|.|.++.+. .+...|++... -|.++|+.. .|.||+.+..|. |.+.. ..+ .+..
T Consensus 23 ~qLY~rtg~g~~~~~LqI~~dG~V~Gt~d~-s~~siLei~sv~~G~V~IkGv~S~~YLcMn~~G~-LYgs~-~~t~~eC~ 99 (194)
T 2p23_A 23 RHLYTSGPHGLSSCFLRIRADGVVDCARGQ-SAHSLLEIKAVALRTVAIKGVHSVRYLCMGADGK-MQGLL-QYSEEDCA 99 (194)
T ss_dssp EEEEEECTTSCCEEEEEECTTSBEEEESSC-CTTTCEEEEEEETTEEEEEETTTCCEEEECGGGC-EEEES-SCCHHHHE
T ss_pred EEEEEccCCCCcceEEEECCCCcEeCccCC-CcccEEEEEeccCCEEEEEEcccCcEEEECCCCC-EeecC-cCCcCCcE
Confidence 44545444 59999999999999764 88889988876 599999986 899999999997 77742 334 3455
Q ss_pred EEEEE
Q psy2222 181 VKLRS 185 (264)
Q Consensus 181 ~~iR~ 185 (264)
|.=++
T Consensus 100 F~E~i 104 (194)
T 2p23_A 100 FEEEI 104 (194)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 54443
No 43
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=94.21 E-value=0.21 Score=41.43 Aligned_cols=74 Identities=9% Similarity=0.053 Sum_probs=55.9
Q ss_pred EEEEecCC-----eEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecCCCeeEEecccCC-Ccce
Q psy2222 109 VAFKSGFD-----KYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQDDSIVATSRKAG-KNEM 180 (264)
Q Consensus 109 ~~lKs~~G-----kYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~~~~l~a~s~~~g-~~e~ 180 (264)
.+|=+.+| .||-+..+|.|.++.+ ..+...|++... -|.++|+.. .|.||+.+..|. |.+... .+ ....
T Consensus 11 ~~LY~~~~~g~~~~~LqI~~dG~V~Gt~d-~~~~siLei~sv~~g~V~I~gv~s~~YLcMn~~G~-Lygs~~-~t~~eC~ 87 (162)
T 1pwa_A 11 RHLYTSGPHGLSSCFLRIRADGVVDCARG-QSAHSLLEIKAVALRTVAIKGVHSVRYLCMGADGK-MQGLLQ-YSEEDCA 87 (162)
T ss_dssp EEEEECCTTSCCCEEEEECTTSBEEEESS-CCGGGCEEEEEEETTEEEEEETTTCCEEEECGGGC-EEEESS-CCHHHHE
T ss_pred EEEEEccCCCCceeEEEECCCCcEeCCcC-CCCccEEEEEeecCCEEEEEEcccCcEEEEcCCCC-EeecCc-CCCCcce
Confidence 55666555 4999999999999965 578888888866 599999986 899999999997 777432 33 3445
Q ss_pred EEEEE
Q psy2222 181 VKLRS 185 (264)
Q Consensus 181 ~~iR~ 185 (264)
|.=++
T Consensus 88 F~E~~ 92 (162)
T 1pwa_A 88 FEEEI 92 (162)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 54443
No 44
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=93.74 E-value=0.33 Score=41.73 Aligned_cols=70 Identities=16% Similarity=0.114 Sum_probs=49.9
Q ss_pred CeeeccccCCCCCCEEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecCC
Q psy2222 49 GWTQVKHIKDIVGAISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKNG 125 (264)
Q Consensus 49 ~W~~~~~~~dI~Gp~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~G 125 (264)
.|.....+.+ |.+.|+-.. ++||++..+|.... .++.-+..|.|.+++...+.|+||+ +.|+-|.....+
T Consensus 98 ~W~i~~~~p~--G~VqFvN~~TgtCL~ay~nGvv~~-----~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~~s 169 (206)
T 1sr4_A 98 NWKMEPGKHR--EYFRFVNQSLGTCVEAYGNGLIHD-----ICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPVS 169 (206)
T ss_dssp CEEEEECSST--TCEEEEETTTCCEEEEETTEEEEE-----CCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECSSC
T ss_pred eeEEEeecCC--CEEEEEECCCCceeeeccCCeEEe-----cCCCCCcccEEEEecCCCccEEEEECCCCccCCccCCC
Confidence 4655433333 667777766 99999998885222 2444445899999998877999999 688888875543
No 45
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=89.67 E-value=2.9 Score=35.82 Aligned_cols=71 Identities=6% Similarity=0.003 Sum_probs=52.9
Q ss_pred CCccccEEEEE-ecCCeEEEEe-cCCeEEEEecCCcEEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEec
Q psy2222 93 PSPEEIFTAIL-VNDSKVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSE 163 (264)
Q Consensus 93 ~~~~evf~~~~-v~dt~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~ 163 (264)
.+..++|.+++ .+++.|+|+. ..|..|.+..+|.+....+.-...-.|.+.+. .|.+.||+. +|.=|++..
T Consensus 93 FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay~nGvv~~~C~~s~~~Q~wsiiPttnGAVQIKnvatg~CL~t~~ 167 (206)
T 1sr4_A 93 FGNIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNGLIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNP 167 (206)
T ss_dssp GGGGGCEEEEECSSTTCEEEEETTTCCEEEEETTEEEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECS
T ss_pred cCCcceeEEEeecCCCEEEEEECCCCceeeeccCCeEEecCCCCCcccEEEEecCCCccEEEEECCCCccCCccC
Confidence 34567899984 6777999999 57999999988876655555334678999988 588999986 455566533
No 46
>3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A
Probab=89.66 E-value=4.3 Score=36.14 Aligned_cols=89 Identities=12% Similarity=0.206 Sum_probs=66.9
Q ss_pred ccccEEEEEecC-CeEEEEecC--CeEEEEecC-CcEEEeccCCCCCCceEEEEe--CCceEEecc--CceeEEEecCCC
Q psy2222 95 PEEIFTAILVND-SKVAFKSGF--DKYLSIDKN-GRVTGRSDAVGPLEQWEPVFE--DDNMALLGA--NQCFMSVSEQDD 166 (264)
Q Consensus 95 ~~evf~~~~v~d-t~~~lKs~~--GkYLs~d~~-G~v~a~a~a~g~~E~f~iv~~--~g~~alq~~--ng~fLs~~~~~~ 166 (264)
..|.|.++..++ +.+.|++.+ +.+|+.+.. +.|......-+....|.|+.. +|.|.|++. .++.|.+.....
T Consensus 44 ~~Q~W~~~yd~~~g~Y~I~n~~~~~lvL~~~~~~~~V~~~~~~g~~~Q~W~l~~~~~dG~y~i~n~~~s~~vLdv~~gs~ 123 (286)
T 3aj6_A 44 ANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDT 123 (286)
T ss_dssp GGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEEECCCCCGGGCEEEEECTTTCCEEEEESSCTTEEEEECTTSC
T ss_pred cCCeEEEEEcCCCCeEEEEECCCCcEEEEccCCCCCEEEeCCCCCcceEEEEEEeCCCCEEEEEECCCCceEEEecCCCe
Confidence 468999998875 489999954 567888764 467777777777788999986 799999994 478999986553
Q ss_pred eeEEecccCCCcceEEEE
Q psy2222 167 SIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 167 ~l~a~s~~~g~~e~~~iR 184 (264)
|..-...-+.+..|+|-
T Consensus 124 -v~~~~~~g~~~Q~w~i~ 140 (286)
T 3aj6_A 124 -LMVSTQTSSSNQFFKFS 140 (286)
T ss_dssp -EEEEECCSCGGGCEEEE
T ss_pred -EEEEecCCCCceeEEEe
Confidence 66666666677777764
No 47
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=88.11 E-value=18 Score=34.38 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=66.5
Q ss_pred CccccEEEEEecCCeEEEEe-cCCeEEEEec----CCc-EEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecC-
Q psy2222 94 SPEEIFTAILVNDSKVAFKS-GFDKYLSIDK----NGR-VTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQ- 164 (264)
Q Consensus 94 ~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~----~G~-v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~- 164 (264)
...|.|.+....++.+.|++ +.|++|.+.. +|. |+--.-.-++..+|.++.. +|.|.|++. +|+.|.+.+.
T Consensus 395 ~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~nQ~W~~~~~g~g~y~i~~~~sg~cLdv~~~s 474 (526)
T 3vsf_A 395 SLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQYTSNGGYNQHWKFTDIGDGYYKISSRHCGKLIDVRKWS 474 (526)
T ss_dssp CGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEEEETTEEEEEESSSCCEEEEGGGC
T ss_pred CcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEecCCCCcccEEEEEECCCCeEEEEECCCCCEEEeCCCC
Confidence 45799999999888999998 5799999753 343 3333334558889999987 689999985 7899998543
Q ss_pred ---CCeeEEecccCCCcceEEEEEcccc
Q psy2222 165 ---DDSIVATSRKAGKNEMVKLRSNSLH 189 (264)
Q Consensus 165 ---~~~l~a~s~~~g~~e~~~iR~~a~~ 189 (264)
+..|.--.-.-+.+.+|++.-....
T Consensus 475 ~~~G~~v~~~~c~g~~nQ~W~~~~v~~~ 502 (526)
T 3vsf_A 475 TEDGGIIQQWSDAGGTNQHWKLVLVSSP 502 (526)
T ss_dssp CSTTEEEEEECCCCCGGGCEEEEEC---
T ss_pred CCCCCEEEEEcCCCCccCeEEEEecCCC
Confidence 2224333333477889998765443
No 48
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=86.20 E-value=18 Score=32.33 Aligned_cols=93 Identities=10% Similarity=0.163 Sum_probs=63.9
Q ss_pred CccccEEEEEe--cCCeEEEEe-cCCeEEEEe----cCCcEEEecc----CCCCCCceEEEEe-C-CceEEecc-CceeE
Q psy2222 94 SPEEIFTAILV--NDSKVAFKS-GFDKYLSID----KNGRVTGRSD----AVGPLEQWEPVFE-D-DNMALLGA-NQCFM 159 (264)
Q Consensus 94 ~~~evf~~~~v--~dt~~~lKs-~~GkYLs~d----~~G~v~a~a~----a~g~~E~f~iv~~-~-g~~alq~~-ng~fL 159 (264)
.+-|.|++.++ .++.+.|++ +.|++|-+. .+|.-+---+ .-+...+|.++.. + |.|.|.+. .|+.|
T Consensus 43 ~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt~V~qw~~~~~~~g~nQqW~l~~~~g~G~y~I~n~~SGk~L 122 (293)
T 3ef2_A 43 NWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFV 122 (293)
T ss_dssp CTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEEECCCTTCCCGGGCEEEEECTTSSSEEEEETTTCCEE
T ss_pred CccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCCEEEEeccCCCCCCCCcEEEEEEeCCCCEEEEEECCCCcEE
Confidence 46799999996 456899998 679999986 3454333233 3466889999987 4 68999986 68899
Q ss_pred EEecCC----CeeEEec---ccCCCcceEEEEEc
Q psy2222 160 SVSEQD----DSIVATS---RKAGKNEMVKLRSN 186 (264)
Q Consensus 160 s~~~~~----~~l~a~s---~~~g~~e~~~iR~~ 186 (264)
.+.... ..|.--. ..-+.+..|++.-.
T Consensus 123 DV~g~stanGt~V~qw~~~~~~g~~nQqW~l~~~ 156 (293)
T 3ef2_A 123 DLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRM 156 (293)
T ss_dssp EEGGGCCSTTEEEEEECCCSSCCCGGGCEEEEEC
T ss_pred EeCCCCCCCCCEEEEEeccCCCCCcccEEEEEec
Confidence 886532 2132222 33567788887643
No 49
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=86.01 E-value=5.5 Score=32.00 Aligned_cols=81 Identities=9% Similarity=0.139 Sum_probs=54.2
Q ss_pred EEEEEecC---CeEEEEecCCeEEEEec----CCc-EEEeccCCCCCCceEEEEe--CCceEEecc-CceeEEEecCCC-
Q psy2222 99 FTAILVND---SKVAFKSGFDKYLSIDK----NGR-VTGRSDAVGPLEQWEPVFE--DDNMALLGA-NQCFMSVSEQDD- 166 (264)
Q Consensus 99 f~~~~v~d---t~~~lKs~~GkYLs~d~----~G~-v~a~a~a~g~~E~f~iv~~--~g~~alq~~-ng~fLs~~~~~~- 166 (264)
|+++++.+ +.+.|++. |+||.+.. +|. |+.-. +..+|.|+.. +|.|.|... .|+.|.+...++
T Consensus 49 W~~~~~~~~~~g~y~i~n~-G~~Ldv~~~~ta~Gt~v~~~~----~~q~W~i~~~~~~G~y~I~~~~sg~~Ldv~stanG 123 (148)
T 3nbc_A 49 WTLVQLPHTTIYTMQAVNP-QSYVRVRDDNLVDGAALVGSQ----QPTPVSIESAGNSGQFRIKIPNLGLALTLPSDANS 123 (148)
T ss_dssp EEEEECTTSSEEEEEESSS-CCEEEEGGGCCSTTCBEEEES----SCCCEEEEECSSTTCEEEECTTSSEEEECCCSSTT
T ss_pred EEEEECCCcccceEEEEEC-CcEEEccCCCCCCCcEEecCC----CCcEEEEEEccCCCeEEEEeCCCCeEEEeecCCCC
Confidence 99999998 68999999 99998753 343 44432 2468998873 688999986 577777753221
Q ss_pred -eeEEecccC-CCcceEEEE
Q psy2222 167 -SIVATSRKA-GKNEMVKLR 184 (264)
Q Consensus 167 -~l~a~s~~~-g~~e~~~iR 184 (264)
.|.-=...- +.+..|++.
T Consensus 124 t~i~~w~~~~g~~nQ~W~~~ 143 (148)
T 3nbc_A 124 TPIVLGEVDETSTNQLWAFE 143 (148)
T ss_dssp EECEEEECCSSCGGGCEEEE
T ss_pred cEEEEecCCCCCCCcEEEEE
Confidence 122222233 677777764
No 50
>1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum}
Probab=85.67 E-value=13 Score=32.90 Aligned_cols=90 Identities=8% Similarity=0.068 Sum_probs=65.5
Q ss_pred ccccEEEEEecC-CeEEEEec----CCeEEEEecCCc-EEEeccCCCCCCceEEEE-e-CCceEEecc--CceeEEEecC
Q psy2222 95 PEEIFTAILVND-SKVAFKSG----FDKYLSIDKNGR-VTGRSDAVGPLEQWEPVF-E-DDNMALLGA--NQCFMSVSEQ 164 (264)
Q Consensus 95 ~~evf~~~~v~d-t~~~lKs~----~GkYLs~d~~G~-v~a~a~a~g~~E~f~iv~-~-~g~~alq~~--ng~fLs~~~~ 164 (264)
.-|.|.++..+. +.+.|++. -|.||+.+..+. |......-...+.|.++. . +|-|.|.+. .++.|.+...
T Consensus 39 ~~Q~w~~~y~~~~~~Y~I~n~~~~~~~l~L~~~~~~~~v~~~~~~~~~~Q~W~l~k~~~dG~y~I~n~~~s~~vLdv~t~ 118 (288)
T 1ybi_A 39 YLERWRLIYDSNKAAYKIKSMDIHNTNLVLTWNAPTHNISTQQDSNADNQYWLLLKDIGNNSFIIASYKNPNLVLYADTV 118 (288)
T ss_dssp GGGCEEEEEETTTTEEEEEECCCSSSCEEEEECTTSSBEEEEECCCCGGGCEEEEEETTTTEEEEEESSCTTCEEEEETT
T ss_pred cccEEEEEEeCCCCEEEEEEeccCCCceEEEecCCCceEEEeCCCCccceEEEEEEECCCCeEEEEECCCCCeeEEEECC
Confidence 468999999875 58888875 589999987544 666666666778899984 3 799999996 3788988742
Q ss_pred CCeeEEecccCCCcceEEEE
Q psy2222 165 DDSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 165 ~~~l~a~s~~~g~~e~~~iR 184 (264)
+..|..-...-+....|+|.
T Consensus 119 ~g~v~~~~~ngs~~Q~w~i~ 138 (288)
T 1ybi_A 119 ARNLKLSTLNNSNYIKFIIE 138 (288)
T ss_dssp TTEEEEECCCSSGGGCEEEE
T ss_pred CCcEEEeCCCCCcCceEEEc
Confidence 22466655555666777665
No 51
>1sr4_C CDT C, cytolethal distending toxin protein C; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1
Probab=85.04 E-value=1.2 Score=37.01 Aligned_cols=70 Identities=11% Similarity=0.064 Sum_probs=48.3
Q ss_pred cCCCCCeeeccccC-------CCCCCEEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-c
Q psy2222 44 IENYAGWTQVKHIK-------DIVGAISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-G 114 (264)
Q Consensus 44 ~~~~~~W~~~~~~~-------dI~Gp~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~ 114 (264)
...+..|...+-.. +-.|-|+|.-.. ++||++..++...| +. +..++|++++...+.|+||+ .
T Consensus 40 ~~e~~NW~l~ei~l~~~d~~~~~~G~VqFvn~~t~tCL~~~~~~~~~C-------~~-~~~t~FsiiPTttgAVQIrS~~ 111 (166)
T 1sr4_C 40 NYLSTHWELIDYKGKEYEKLRDGGTLVQFKVVGAAKCFAFLGKGTTDC-------KD-TDHTVFNLIPTNTGAFLIKDAL 111 (166)
T ss_dssp SGGGGCEEEEECCCCTTCTTCTTCEEEEEECTTSSEEECSSTTSEEET-------TC-HHHHCEEEEEBTTSCEEEEETT
T ss_pred ChhhCCcEEEEeccCccccccCCCCeEEEEeCCCCeeeeecCCccccC-------CC-ChhceEEEEecCCccEEEEecC
Confidence 45678999765211 113545555554 88999977755556 22 36799999999888999999 5
Q ss_pred CCeEEEE
Q psy2222 115 FDKYLSI 121 (264)
Q Consensus 115 ~GkYLs~ 121 (264)
.|+-|.+
T Consensus 112 ~~~CI~~ 118 (166)
T 1sr4_C 112 LGFCITS 118 (166)
T ss_dssp TCCEEEC
T ss_pred CCceEee
Confidence 6666666
No 52
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=85.04 E-value=10 Score=29.83 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=52.4
Q ss_pred ccEEEEEecCCeEEEEe-cCCeEEEEec----CCc-EEEeccCCCCCCceEEEEe-CCceEEecc-CceeEEEecC----
Q psy2222 97 EIFTAILVNDSKVAFKS-GFDKYLSIDK----NGR-VTGRSDAVGPLEQWEPVFE-DDNMALLGA-NQCFMSVSEQ---- 164 (264)
Q Consensus 97 evf~~~~v~dt~~~lKs-~~GkYLs~d~----~G~-v~a~a~a~g~~E~f~iv~~-~g~~alq~~-ng~fLs~~~~---- 164 (264)
--+.+..++++.+.|++ +.|++|.+.. +|. |.--.-.-++..+|.+... +|.|.|++. .|+.|.+.+.
T Consensus 17 ~~~~~~~~~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~ 96 (165)
T 3pg0_A 17 LVPRGSHMGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSD 96 (165)
T ss_dssp ---------CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCST
T ss_pred ccccceECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCC
Confidence 34455667777899998 6899998853 333 4443334457889999886 689999985 6889988542
Q ss_pred CCeeEEecccCCCcceEEEEE
Q psy2222 165 DDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 165 ~~~l~a~s~~~g~~e~~~iR~ 185 (264)
+..|.--.-.-+.+..|.+.-
T Consensus 97 G~~v~~~~c~~~~~Q~W~~~~ 117 (165)
T 3pg0_A 97 GANVIQYSYSGGDNQQWRLVD 117 (165)
T ss_dssp TCBEEEECCCCCGGGCEEEEE
T ss_pred CCEEEEEcCCCCCccEEEEEE
Confidence 222432222234566777654
No 53
>2f2f_C CDT C, cytolethal distending toxin C; actinobacillus actinomycetemcomitans, oligomerization, stability and toxic activity; 2.40A {Aggregatibacter actinomycetemcomitans} SCOP: b.42.2.1
Probab=84.86 E-value=1 Score=38.06 Aligned_cols=71 Identities=10% Similarity=0.040 Sum_probs=48.2
Q ss_pred CcCCCCCeeecccc-------CCCCCCEEEEeCC-CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-
Q psy2222 43 DIENYAGWTQVKHI-------KDIVGAISIEFGK-RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS- 113 (264)
Q Consensus 43 d~~~~~~W~~~~~~-------~dI~Gp~~i~~~s-~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs- 113 (264)
....++.|...+.. .+-.|-|+|+-.. ++||++..++...| +.-+ .++|++++...+.|++|+
T Consensus 59 ~~~~~~nW~l~ei~~~~~d~~~~~~G~VqFvn~~t~tCL~~~~~~~~~C-------~~~~-~t~FsliPTtnGAVQIrS~ 130 (186)
T 2f2f_C 59 HNYLSTHWELIDYKGKEYEKLRDGGTLVQFKVVGAAKCFAFPGEGTTDC-------KDID-HTVFNLIPTNTGAFLIKDA 130 (186)
T ss_dssp TSGGGGCEEEEECCCSTTTTTCTTCEEEEEECTTSSEEECTTCSSEEET-------TCHH-HHCEEEEEBSSSCEEEEET
T ss_pred cccccCCcEEEEecccccccccCCCCeEEEEeCCCCeeeeecCCccccC-------CCCC-cceEEEEecCCccEEEEec
Confidence 34567899966431 1212555555555 88999877755555 2222 899999999888999999
Q ss_pred cCCeEEEE
Q psy2222 114 GFDKYLSI 121 (264)
Q Consensus 114 ~~GkYLs~ 121 (264)
..|+-|.+
T Consensus 131 ~~~~Ci~~ 138 (186)
T 2f2f_C 131 LLGFCMTS 138 (186)
T ss_dssp TTCCEEEC
T ss_pred CCCceEee
Confidence 56666666
No 54
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=83.97 E-value=11 Score=30.53 Aligned_cols=75 Identities=12% Similarity=0.223 Sum_probs=54.1
Q ss_pred CCCCCccccEEEEEe----cCCeEEEEe-cCCeEEEEecCCcE-EEec-cCCCCCCceEEEEe----CCceEEecc--Cc
Q psy2222 90 KEGPSPEEIFTAILV----NDSKVAFKS-GFDKYLSIDKNGRV-TGRS-DAVGPLEQWEPVFE----DDNMALLGA--NQ 156 (264)
Q Consensus 90 ~e~~~~~evf~~~~v----~dt~~~lKs-~~GkYLs~d~~G~v-~a~a-~a~g~~E~f~iv~~----~g~~alq~~--ng 156 (264)
++-|++-|.|.+..+ .+..+.|-. +.|+||.++..+.. +... .-.++.-.|.|+.. +|-|.|.+. .|
T Consensus 40 ~~T~~d~qkw~~~~v~~~~~~~~Y~Iinv~sG~~L~~~~~~~~at~~q~sp~~~~~rWrI~~~G~~~~G~f~I~nk~~s~ 119 (153)
T 2x2s_A 40 GDKPSDNAKWQVALVAGSGDSAEYLIINVHSGYFLTATKENHIVSTPQISPTDPSARWTIKPATTHQYEVFTINNKVSEL 119 (153)
T ss_dssp CSSCCGGGCEEEEEEECCGGGCEEEEEETTTCCBCBCCSTTEECEECCCCTTCGGGCEEEEESCC--CCCEEEEESSGGG
T ss_pred CCCCCCcceeEEEEEeccCCCceEEEEecCCccEEEecCCCCceEEEEEcCCCccceEEEEeccccCcceEEEecccCCC
Confidence 345777899998887 445666666 89999999988654 2221 22236778999984 689999986 67
Q ss_pred eeEEEecC
Q psy2222 157 CFMSVSEQ 164 (264)
Q Consensus 157 ~fLs~~~~ 164 (264)
.-|.+.+.
T Consensus 120 ~vldV~~~ 127 (153)
T 2x2s_A 120 GQLTVKDY 127 (153)
T ss_dssp CEEEEGGG
T ss_pred ceEEeccC
Confidence 88888653
No 55
>3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A
Probab=82.65 E-value=25 Score=31.04 Aligned_cols=90 Identities=9% Similarity=0.060 Sum_probs=64.5
Q ss_pred ccccEEEEEec-CCeEEEEe--cCCeEEEEecCCcEEEeccCCCCCCceEEEE------eCCceEEecc--CceeEEEec
Q psy2222 95 PEEIFTAILVN-DSKVAFKS--GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVF------EDDNMALLGA--NQCFMSVSE 163 (264)
Q Consensus 95 ~~evf~~~~v~-dt~~~lKs--~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~------~~g~~alq~~--ng~fLs~~~ 163 (264)
.-|.|.+++.. ++.|.|++ +.++.|.+.....|..-...-++.-.|.+++ .+|.|.|.+. .|+.|.+..
T Consensus 89 ~~Q~W~l~~~~~dG~y~i~n~~~s~~vLdv~~gs~v~~~~~~g~~~Q~w~i~~~~~~~i~dG~Y~i~~~~~sgk~lDv~~ 168 (286)
T 3aj6_A 89 DNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDTLMVSTQTSSSNQFFKFSNCIYEALNNRNCKLQTQLNSDRFLSKNL 168 (286)
T ss_dssp GGGCEEEEECTTTCCEEEEESSCTTEEEEECTTSCEEEEECCSCGGGCEEEEEHHHHHHTTEEEEEEETTCTTCEEEECT
T ss_pred cceEEEEEEeCCCCEEEEEECCCCceEEEecCCCeEEEEecCCCCceeEEEeccccccCCCceEEEEecCCCceEEEecC
Confidence 45899999885 67899999 3588999987667888888888889999987 3799999985 469999954
Q ss_pred CCCeeEEecccCCCcceEEEE
Q psy2222 164 QDDSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 164 ~~~~l~a~s~~~g~~e~~~iR 184 (264)
++..|.--...-+.+..|++-
T Consensus 169 ~g~~V~~w~~~g~~nQ~W~~~ 189 (286)
T 3aj6_A 169 NSQIIVLWQWIDSSRQKWIIE 189 (286)
T ss_dssp TSSBEEEECCCCCGGGCEEEE
T ss_pred CCceEEEeCCCCCccceEEEE
Confidence 443343322223444455543
No 56
>1ybi_A HA33A, HA33/A, non-toxin haemagglutinin HA34; beta-trefoil; 1.50A {Clostridium botulinum}
Probab=79.78 E-value=12 Score=33.07 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=54.9
Q ss_pred EecCCeEEEEecCC--eEEEEecCCcEEEeccCCCCCCceEEEEe--CCceEEecc----CceeEEEecCCCeeEEeccc
Q psy2222 103 LVNDSKVAFKSGFD--KYLSIDKNGRVTGRSDAVGPLEQWEPVFE--DDNMALLGA----NQCFMSVSEQDDSIVATSRK 174 (264)
Q Consensus 103 ~v~dt~~~lKs~~G--kYLs~d~~G~v~a~a~a~g~~E~f~iv~~--~g~~alq~~----ng~fLs~~~~~~~l~a~s~~ 174 (264)
.++|+.+.+++... ++|... .|.|.--...-+....|.+++. +|.|.|++. .|.+|+++..+..|......
T Consensus 5 ~~~dg~y~I~~~~~~~~~l~~~-~~~v~~~~~~~~~~Q~w~~~y~~~~~~Y~I~n~~~~~~~l~L~~~~~~~~v~~~~~~ 83 (288)
T 1ybi_A 5 SLNDKIVTISCKADTNLFFYQV-AGNVSLFQQTRNYLERWRLIYDSNKAAYKIKSMDIHNTNLVLTWNAPTHNISTQQDS 83 (288)
T ss_dssp CCTTCEEEEEETTEEEEEEEEE-TTEEEEECCCCSGGGCEEEEEETTTTEEEEEECCCSSSCEEEEECTTSSBEEEEECC
T ss_pred ccCCCEEEEEEccCCCeEEecC-CCcEEEecCCCccccEEEEEEeCCCCEEEEEEeccCCCceEEEecCCCceEEEeCCC
Confidence 45677888888654 455555 4557666677778899999986 478999987 48899997765546554443
Q ss_pred CCCcceEEEE
Q psy2222 175 AGKNEMVKLR 184 (264)
Q Consensus 175 ~g~~e~~~iR 184 (264)
-.....|.|.
T Consensus 84 ~~~~Q~W~l~ 93 (288)
T 1ybi_A 84 NADNQYWLLL 93 (288)
T ss_dssp CCGGGCEEEE
T ss_pred CccceEEEEE
Confidence 3344444443
No 57
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=79.23 E-value=9.3 Score=34.26 Aligned_cols=91 Identities=10% Similarity=0.193 Sum_probs=63.4
Q ss_pred CccccEEEEEecCC-eEEEEe-cCCeEEEEec----CCc-EEEeccCCCCCCceEEEEeCCceEEecc-CceeEEEecC-
Q psy2222 94 SPEEIFTAILVNDS-KVAFKS-GFDKYLSIDK----NGR-VTGRSDAVGPLEQWEPVFEDDNMALLGA-NQCFMSVSEQ- 164 (264)
Q Consensus 94 ~~~evf~~~~v~dt-~~~lKs-~~GkYLs~d~----~G~-v~a~a~a~g~~E~f~iv~~~g~~alq~~-ng~fLs~~~~- 164 (264)
..-|.|++....++ .+.|++ +.|+.|-+.. +|. |+--...-++..+|.++..+|.|.|++. .|++|.+...
T Consensus 44 ~~nQqW~l~~~G~G~~Y~I~N~~SGKcLDV~g~sTadGa~V~qW~~nGg~NQqW~l~~~~G~y~I~n~~SGkcLDV~~gs 123 (286)
T 3phz_A 44 PLNNLWLIEPVGEADTYTVRNAFAGSYMDLAGHAATDGTAIIGYRPTGGDNQKWIISQINDVWKIKSKETGTFVTLLNGD 123 (286)
T ss_dssp CGGGCEEEEECSSTTEEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEESSSCEEEEETTTCCEEEEETC-
T ss_pred ChHHEEEEEECCCCcEEEEEECCCCcEEEeCCCcCCCCCeEEEeCCCCChhcEEEEEcCCCeEEEEECCCCcEEEeCCCC
Confidence 35799999997766 699998 5799999863 454 3333344578899999988889999986 7899986433
Q ss_pred ----CCeeEEec-ccCCCcceEEEEE
Q psy2222 165 ----DDSIVATS-RKAGKNEMVKLRS 185 (264)
Q Consensus 165 ----~~~l~a~s-~~~g~~e~~~iR~ 185 (264)
+. |.--. .+-+.+.+|++.-
T Consensus 124 ttanGa-V~qWt~~tgg~NQqW~~~~ 148 (286)
T 3phz_A 124 GGGTGT-VVGWQNITNNTSQNWTFQK 148 (286)
T ss_dssp --CCCE-EEEESCCCSSCTTCEEEEE
T ss_pred cCCCce-EEEccCCCCCccCcEEEEE
Confidence 22 22212 2236777888753
No 58
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=78.69 E-value=5.4 Score=32.09 Aligned_cols=58 Identities=12% Similarity=0.233 Sum_probs=45.9
Q ss_pred cCCeEEEEecC--CeEEEEec----CCc-EEEeccCCCCCCc----eEEEEe-C---CceEEeccCceeEEEec
Q psy2222 105 NDSKVAFKSGF--DKYLSIDK----NGR-VTGRSDAVGPLEQ----WEPVFE-D---DNMALLGANQCFMSVSE 163 (264)
Q Consensus 105 ~dt~~~lKs~~--GkYLs~d~----~G~-v~a~a~a~g~~E~----f~iv~~-~---g~~alq~~ng~fLs~~~ 163 (264)
+++.+.|+..+ |++|-+.. +|. |+.-...-++..+ |+++.. + |.|.|++. |+||.+..
T Consensus 3 ~~G~Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~-G~~Ldv~~ 75 (148)
T 3nbc_A 3 TPGTYNITNVAYTNRLIDLTGSNPAENTLIIGHHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP-QSYVRVRD 75 (148)
T ss_dssp CSEEEEEEESSCTTCEEEEGGGCCSTTEEEEEECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS-CCEEEEGG
T ss_pred cCCEEEEEEecCCCCeEECCCCcCCCCcEEEEeCCCCChhheeecEEEEEECCCcccceEEEEEC-CcEEEccC
Confidence 45578899854 99999975 343 6666667778888 999986 6 88999999 99998864
No 59
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A
Probab=78.28 E-value=19 Score=36.90 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=62.0
Q ss_pred CccccEEEEEecC-CeEEEEe--cCCeEEEEecCCc-EEEeccCCCCCCceEEEEe-CCceEEec-c-CceeEEEecC--
Q psy2222 94 SPEEIFTAILVND-SKVAFKS--GFDKYLSIDKNGR-VTGRSDAVGPLEQWEPVFE-DDNMALLG-A-NQCFMSVSEQ-- 164 (264)
Q Consensus 94 ~~~evf~~~~v~d-t~~~lKs--~~GkYLs~d~~G~-v~a~a~a~g~~E~f~iv~~-~g~~alq~-~-ng~fLs~~~~-- 164 (264)
...|.|++....+ +.+.|++ +.|++|.++..|. ++--...-++..+|.++.. +|.|.|.+ . .|+.|.+...
T Consensus 449 ~~nQqW~~~~~g~~G~Y~I~n~~~sg~~Ldv~~~g~~v~~~~~~g~~~QqW~l~~~gdG~y~I~n~~~Sg~~LDV~~~st 528 (841)
T 2vse_A 449 KENQVWNLIYNPILKAYKIKSLKYPNYSLAWDSNNTRTIVAATGDYNDQYWLIERNEDNTYIIRNYENRKIVLDLSNGST 528 (841)
T ss_dssp CGGGCEEEEEETTTTEEEEEESSCTTCEEEECTTTTCBEEEECSCCGGGEEEEEECTTSCEEEEESSSTTEEEEEGGGCC
T ss_pred CccccEEEeeccccceEEEEecCCCceEEEecCCCCcEEEecCCCCcccEEEEEECCCCeEEEEEcCCCCceEecCCCCC
Confidence 3579999999986 5889998 5789999987652 2222234467889999876 79999998 4 4888888543
Q ss_pred --CCeeEEecccCCCcceEEEEE
Q psy2222 165 --DDSIVATSRKAGKNEMVKLRS 185 (264)
Q Consensus 165 --~~~l~a~s~~~g~~e~~~iR~ 185 (264)
+..|..-...-+.+..|++.-
T Consensus 529 anGt~v~~w~~ng~~nQqW~~~~ 551 (841)
T 2vse_A 529 TDGNGLLGFEFHGGINQRWIIKP 551 (841)
T ss_dssp STTCCEEEEECCCCGGGCEEEEE
T ss_pred CCCCeEEEeCCCCCccCcceEec
Confidence 222333233345556666543
No 60
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3
Probab=74.46 E-value=55 Score=30.37 Aligned_cols=90 Identities=14% Similarity=0.185 Sum_probs=59.4
Q ss_pred CCcEEEEc-CCCceEeeccCCCCCCCCccccEEEEEecCCeEEEEe-cCCeEEEEecC-CcEEEeccCCC--CCCceEEE
Q psy2222 69 KRTFVSAL-DNGLFILGAIHEDKEGPSPEEIFTAILVNDSKVAFKS-GFDKYLSIDKN-GRVTGRSDAVG--PLEQWEPV 143 (264)
Q Consensus 69 s~~yL~a~-~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt~~~lKs-~~GkYLs~d~~-G~v~a~a~a~g--~~E~f~iv 143 (264)
++.|+... ++|...-+.|... -+..++|.++... +.+.||. ..|.||.+... |.+.+. .+.+ ...+|.++
T Consensus 299 ~g~~~~~~~~~g~~~yg~~~~~---~~~~~~W~~~~~~-g~~~ikn~~tg~y~~~~~~~~~~~~~-~~~~~w~~~~w~~~ 373 (420)
T 1ups_A 299 TGKFLYIEENNDKVSYGDITLK---NEKNAKWSKEYRD-GYTLLKNNETGEYLNIENQTGYIEHG-KVPKTWWSAQWSEV 373 (420)
T ss_dssp TCCEEECCTTCSSCEEECCCTT---TTGGGCEEEEEET-TEEEEEETTTCCEEECTTCCSBCEEE-CCCTTCGGGCEEEE
T ss_pred CCcEEEEeccCCeeeccCcccC---CCcCceeEEEecC-CcEEEeeccccceEccccCCCccccc-cCCCCcccceEEEe
Confidence 47777632 3444444444321 1223789888766 5677887 79999999875 555444 4555 46789888
Q ss_pred EeCCceEEecc--CceeEEEec
Q psy2222 144 FEDDNMALLGA--NQCFMSVSE 163 (264)
Q Consensus 144 ~~~g~~alq~~--ng~fLs~~~ 163 (264)
+.+|-+.|++. .+.||.+..
T Consensus 374 ~~~G~~~i~~~~~~~~~l~~e~ 395 (420)
T 1ups_A 374 PVDGYTRFVNRWKPNMSIHTES 395 (420)
T ss_dssp EETTEEEEEESSSTTCEEECTT
T ss_pred cCCCeEEEEEeccCCceEEEec
Confidence 88898889885 468888754
No 61
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=72.71 E-value=8.2 Score=25.42 Aligned_cols=37 Identities=32% Similarity=0.450 Sum_probs=30.2
Q ss_pred eEEEEe-cCCeEEEEecCCcEEEeccCCCCCCceEEEE
Q psy2222 108 KVAFKS-GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVF 144 (264)
Q Consensus 108 ~~~lKs-~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~ 144 (264)
-+-||| ..|-||-+.++|.|.++.+.-.+.-.+++..
T Consensus 7 ~~~~~~~~~Gf~LqI~PdG~V~GTr~~~s~~SlLEi~~ 44 (48)
T 3ol0_A 7 PVLLKSTETGQYLRINPDGTVDGTRDRSDPHIQFQISP 44 (48)
T ss_dssp CEEEEETTTCCEEEECTTSBEEEESCTTCGGGCEEEEE
T ss_pred cchheeccCcEEeEECCCCCCccccCCCCCcceEEEEE
Confidence 367888 4678999999999999998777777777754
No 62
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=67.54 E-value=48 Score=26.87 Aligned_cols=117 Identities=6% Similarity=0.008 Sum_probs=69.8
Q ss_pred CEEEEeCC--CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEec-C---CeEEEEe--cCCeEEEEecCCcEEEeccC
Q psy2222 62 AISIEFGK--RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVN-D---SKVAFKS--GFDKYLSIDKNGRVTGRSDA 133 (264)
Q Consensus 62 p~~i~~~s--~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~-d---t~~~lKs--~~GkYLs~d~~G~v~a~a~a 133 (264)
++.|+.-+ +.||.-.+.. ..+.. ...+....+|.+++-- + +.|+|.| .-|+||--... .|.-....
T Consensus 10 ~vsl~S~n~p~~ylRh~~~~-~~~~~----~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~~~-~l~L~~~~ 83 (157)
T 3kmv_A 10 KAKFQSYNYPNMYIRHANFD-ARIDE----NVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHSNY-DLSLEKND 83 (157)
T ss_dssp CBEEEESSSTTCEEEEETTE-EEEES----SCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEETT-EEEEEECC
T ss_pred cEEEEecCCCCcEEEEeCCe-EEEcc----CCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEeCC-EEEEeccC
Confidence 55666655 8888865433 22311 1223446789998752 2 3699998 57999986443 43333322
Q ss_pred C----CCCCceEEEEe---CCceEEecc--CceeEEEecCCCeeEEe-cccCCCcceEEEE
Q psy2222 134 V----GPLEQWEPVFE---DDNMALLGA--NQCFMSVSEQDDSIVAT-SRKAGKNEMVKLR 184 (264)
Q Consensus 134 ~----g~~E~f~iv~~---~g~~alq~~--ng~fLs~~~~~~~l~a~-s~~~g~~e~~~iR 184 (264)
- ....+|.++.- .|.++|++. -|+||...+...-|.+. +..-....+|++.
T Consensus 84 ~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh~~~~l~l~~~~t~~fr~dATF~~~ 144 (157)
T 3kmv_A 84 GTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRHYNYLLRLDEIVTELDRQDATFKII 144 (157)
T ss_dssp SCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEEETTEEEEEECCSHHHHHHTCEEEE
T ss_pred CCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEEECCEEEEecCCCchhccCCeEEEe
Confidence 1 24589999975 367899987 69999997653223332 1112234566665
No 63
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=64.53 E-value=15 Score=30.00 Aligned_cols=79 Identities=15% Similarity=0.152 Sum_probs=50.2
Q ss_pred CeEEEEec--CCeEEEEecCCcEEEeccCCCCCCceEEEEe--C---CceEEecc--CceeEEEecCCCeeEEeccc--C
Q psy2222 107 SKVAFKSG--FDKYLSIDKNGRVTGRSDAVGPLEQWEPVFE--D---DNMALLGA--NQCFMSVSEQDDSIVATSRK--A 175 (264)
Q Consensus 107 t~~~lKs~--~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~--~---g~~alq~~--ng~fLs~~~~~~~l~a~s~~--~ 175 (264)
+.+.|+|. -|+||.-.....-+..........+|.+++. + |-+.|++. -|+||.-.+....|.+...+ .
T Consensus 9 ~~vsl~S~n~p~~ylRh~~~~~~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~~~~l~L~~~~~s~~f 88 (157)
T 3kmv_A 9 TKAKFQSYNYPNMYIRHANFDARIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHSNYDLSLEKNDGTSLF 88 (157)
T ss_dssp -CBEEEESSSTTCEEEEETTEEEEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEETTEEEEEECCSCHHH
T ss_pred ccEEEEecCCCCcEEEEeCCeEEEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEeCCEEEEeccCCCCCc
Confidence 36888884 8999998765332222234556789999976 2 56899985 69999876543223332211 2
Q ss_pred CCcceEEEEE
Q psy2222 176 GKNEMVKLRS 185 (264)
Q Consensus 176 g~~e~~~iR~ 185 (264)
....+|+++-
T Consensus 89 ~~dATF~~~~ 98 (157)
T 3kmv_A 89 AESATFKIVP 98 (157)
T ss_dssp HHTTCEEEEE
T ss_pred cCCceEEEcc
Confidence 3457888875
No 64
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A
Probab=64.43 E-value=42 Score=34.40 Aligned_cols=91 Identities=8% Similarity=0.110 Sum_probs=59.7
Q ss_pred CccccEEEEEe-----cCCeEEEEecC-C-eEEEEecCCcEEEeccCCCCCCceEEEEeC--CceEEecc--CceeEEEe
Q psy2222 94 SPEEIFTAILV-----NDSKVAFKSGF-D-KYLSIDKNGRVTGRSDAVGPLEQWEPVFED--DNMALLGA--NQCFMSVS 162 (264)
Q Consensus 94 ~~~evf~~~~v-----~dt~~~lKs~~-G-kYLs~d~~G~v~a~a~a~g~~E~f~iv~~~--g~~alq~~--ng~fLs~~ 162 (264)
+.-|.|.+.++ +++.+.|.+.+ | +.|.+...+.|.--...-++..+|+++... |-|.|++. .|++|.+.
T Consensus 401 s~~Q~W~i~~~~~~pi~~GtY~Ivn~~sg~kvLDv~~~snV~~w~~~g~~nQqW~~~~~g~~G~Y~I~n~~~sg~~Ldv~ 480 (841)
T 2vse_A 401 SSSQEWLIEKTNYQTVKDGTYQVSSKLNENKVIEQISTNKVHIFSNSDKENQVWNLIYNPILKAYKIKSLKYPNYSLAWD 480 (841)
T ss_dssp CGGGCEEEEECCCCCSCSEEEEEEETTEEEEEEEEETTTEEEEEECCCCGGGCEEEEEETTTTEEEEEESSCTTCEEEEC
T ss_pred CcccceecccccccccccceEEEEEccCCCEEEEecCCCCeEEecCCCCccccEEEeeccccceEEEEecCCCceEEEec
Confidence 45689999885 35578888854 4 466666555555444456788899999874 78999984 67889887
Q ss_pred cCCCeeEEecccCCCcceEEEE
Q psy2222 163 EQDDSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 163 ~~~~~l~a~s~~~g~~e~~~iR 184 (264)
..+..+.--...-+.+..|.|.
T Consensus 481 ~~g~~v~~~~~~g~~~QqW~l~ 502 (841)
T 2vse_A 481 SNNTRTIVAATGDYNDQYWLIE 502 (841)
T ss_dssp TTTTCBEEEECSCCGGGEEEEE
T ss_pred CCCCcEEEecCCCCcccEEEEE
Confidence 6553332222233456666664
No 65
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=55.86 E-value=17 Score=29.44 Aligned_cols=57 Identities=7% Similarity=0.262 Sum_probs=38.9
Q ss_pred eccCCCCCCceEEEEe-----CCceEEecc-CceeEEEecCCCeeEEe-cccCCCcceEEEEEc
Q psy2222 130 RSDAVGPLEQWEPVFE-----DDNMALLGA-NQCFMSVSEQDDSIVAT-SRKAGKNEMVKLRSN 186 (264)
Q Consensus 130 ~a~a~g~~E~f~iv~~-----~g~~alq~~-ng~fLs~~~~~~~l~a~-s~~~g~~e~~~iR~~ 186 (264)
+.+.+.+.+.|++++. ++.|.|.+. +|+||.+...+.-++.. ....++..+|+|.-.
T Consensus 39 r~~T~~d~qkw~~~~v~~~~~~~~Y~Iinv~sG~~L~~~~~~~~at~~q~sp~~~~~rWrI~~~ 102 (153)
T 2x2s_A 39 RGDKPSDNAKWQVALVAGSGDSAEYLIINVHSGYFLTATKENHIVSTPQISPTDPSARWTIKPA 102 (153)
T ss_dssp CCSSCCGGGCEEEEEEECCGGGCEEEEEETTTCCBCBCCSTTEECEECCCCTTCGGGCEEEEES
T ss_pred cCCCCCCcceeEEEEEeccCCCceEEEEecCCccEEEecCCCCceEEEEEcCCCccceEEEEec
Confidence 3457888999998765 478888875 89999998876412221 222346677877753
No 66
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=55.56 E-value=90 Score=29.08 Aligned_cols=100 Identities=11% Similarity=0.021 Sum_probs=61.8
Q ss_pred EEEeCC--CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEe-cCC-eEEEEecC--CeEEEEecCCcEEEeccCC---
Q psy2222 64 SIEFGK--RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILV-NDS-KVAFKSGF--DKYLSIDKNGRVTGRSDAV--- 134 (264)
Q Consensus 64 ~i~~~s--~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v-~dt-~~~lKs~~--GkYLs~d~~G~v~a~a~a~--- 134 (264)
.|+... +.||.- .++.+.+..+ .......+|.+++- .+. .++|+|.+ |+||-.... .|.-....-
T Consensus 324 s~~s~~~pg~ylrh-~~~~v~l~~~----~~~~~d~tf~~~~gl~~~~~~s~~s~~ypg~~lr~~~~-~~~~~~~~~~~~ 397 (468)
T 3akh_A 324 RFSSYNYPDRYIRH-WDFRARIEAN----VTNLADSQFRVVTGLAGSGTISLESANYPGYYLRHKNY-EVWVEKNDGSSA 397 (468)
T ss_dssp CEEESSSTTCEEEE-ETTEEEEESS----CSSGGGGCEEEEECTTCTTCEEEEESSSTTEEEEEETT-EEEEEECCSCHH
T ss_pred ccccccccccEEEE-ecCcEEEccC----CCCcccceEEEccCCCCCceEEEEEEeCCCeEEEEECC-EEEEecCCCCcc
Confidence 444444 778863 3343444222 12245678988865 433 79999975 999997554 444432111
Q ss_pred -CCCCceEEEEe--C--CceEEecc--CceeEEEecCCCeeEEe
Q psy2222 135 -GPLEQWEPVFE--D--DNMALLGA--NQCFMSVSEQDDSIVAT 171 (264)
Q Consensus 135 -g~~E~f~iv~~--~--g~~alq~~--ng~fLs~~~~~~~l~a~ 171 (264)
....+|.++.. + +-++|++. -|.||...... |..+
T Consensus 398 ~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~--l~~~ 439 (468)
T 3akh_A 398 FKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENL--LRIQ 439 (468)
T ss_dssp HHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTE--EEEE
T ss_pred ccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCe--EEEc
Confidence 24678999986 4 56888876 58999987653 5543
No 67
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=51.71 E-value=1.1e+02 Score=27.28 Aligned_cols=83 Identities=10% Similarity=0.241 Sum_probs=52.2
Q ss_pred ecCCeEEEEe-cCCeEEEEec----CCc-EEEec---cCCCCCCceEEEE---eCCceEEecc-CceeEEEecC----CC
Q psy2222 104 VNDSKVAFKS-GFDKYLSIDK----NGR-VTGRS---DAVGPLEQWEPVF---EDDNMALLGA-NQCFMSVSEQ----DD 166 (264)
Q Consensus 104 v~dt~~~lKs-~~GkYLs~d~----~G~-v~a~a---~a~g~~E~f~iv~---~~g~~alq~~-ng~fLs~~~~----~~ 166 (264)
++++.+.|++ +.|++|-+.. +|. |.--. ..-++..+|+++. .+|.|.|++. .|++|.+... +.
T Consensus 3 l~~G~Y~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt 82 (293)
T 3ef2_A 3 LRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGT 82 (293)
T ss_dssp CCSEEEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTE
T ss_pred cCCcEEEEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCCCccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCC
Confidence 4566788888 6799998863 343 32222 3445888999998 2689999985 7899998642 22
Q ss_pred eeEEec---ccCCCcceEEEEEc
Q psy2222 167 SIVATS---RKAGKNEMVKLRSN 186 (264)
Q Consensus 167 ~l~a~s---~~~g~~e~~~iR~~ 186 (264)
.|.--. -.-+.+..|+|.-.
T Consensus 83 ~V~qw~~~~~~~g~nQqW~l~~~ 105 (293)
T 3ef2_A 83 AVNGWQGTAFTTNPHQLWTIKKS 105 (293)
T ss_dssp EEEEECCCTTCCCGGGCEEEEEC
T ss_pred EEEEeccCCCCCCCCcEEEEEEe
Confidence 232211 02244777777644
No 68
>2y9f_A LSL-150, hemolytic lectin LSLA; sugar binding protein; 1.47A {Laetiporus sulphureus} PDB: 2y9g_A*
Probab=50.97 E-value=93 Score=24.81 Aligned_cols=72 Identities=15% Similarity=0.071 Sum_probs=45.5
Q ss_pred CCCccccEEEEEecC---CeEEEEe-cCCeEEEEecC--CcEE-EeccCCCCCCceEEEEe----CCceEEecc-CceeE
Q psy2222 92 GPSPEEIFTAILVND---SKVAFKS-GFDKYLSIDKN--GRVT-GRSDAVGPLEQWEPVFE----DDNMALLGA-NQCFM 159 (264)
Q Consensus 92 ~~~~~evf~~~~v~d---t~~~lKs-~~GkYLs~d~~--G~v~-a~a~a~g~~E~f~iv~~----~g~~alq~~-ng~fL 159 (264)
-..+.|.|+|+.-.+ +.+++|| ..|+-|-+... -.|- -+.++.=+..-|.++.. +|-|.|..+ .|+-|
T Consensus 41 ~~y~dQ~F~lI~g~ge~~G~yaIkSk~Tg~vlfsr~~~~p~vG~~d~Dgky~dnwF~~E~gk~~l~g~frLv~pst~~~L 120 (150)
T 2y9f_A 41 DQATDQYFSLIYGTGEHAGLYAIKSKATGKVLFSRRPAEPYVGQIDGDGRYPDNWFKIEPGKTYLSKYFRLVQPSTGTAL 120 (150)
T ss_dssp GCCGGGCEEEEECCGGGTTCEEEEETTTCCEEEECSSSSSSEEEESSSSCSGGGCBEEEECCGGGTTCEEEEETTTTEEE
T ss_pred cccCcEEEEEeccCCCcCceEEEEecCcCcEEEEecCCCCccceeCCCCccccccEEEccCCccccceEEEEeecCCcEE
Confidence 355789999999744 3799999 57776666543 1222 22334445566777664 477787775 56666
Q ss_pred EEec
Q psy2222 160 SVSE 163 (264)
Q Consensus 160 s~~~ 163 (264)
..+.
T Consensus 121 vsRT 124 (150)
T 2y9f_A 121 VSRT 124 (150)
T ss_dssp EECS
T ss_pred Eecc
Confidence 5544
No 69
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=42.67 E-value=2.2e+02 Score=26.78 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=35.9
Q ss_pred ccccEEEEEecCCeEEEEe-cCCeEEEEec----CCc-EEEeccCCCCCCceEEEEe
Q psy2222 95 PEEIFTAILVNDSKVAFKS-GFDKYLSIDK----NGR-VTGRSDAVGPLEQWEPVFE 145 (264)
Q Consensus 95 ~~evf~~~~v~dt~~~lKs-~~GkYLs~d~----~G~-v~a~a~a~g~~E~f~iv~~ 145 (264)
..|.|.+....++.+.|+. +.|+.|.+.. +|. |+--.-.-++..+|.++..
T Consensus 443 ~nQ~W~~~~~g~g~y~i~~~~sg~cLdv~~~s~~~G~~v~~~~c~g~~nQ~W~~~~v 499 (526)
T 3vsf_A 443 YNQHWKFTDIGDGYYKISSRHCGKLIDVRKWSTEDGGIIQQWSDAGGTNQHWKLVLV 499 (526)
T ss_dssp GGGCEEEEEEETTEEEEEESSSCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEEC
T ss_pred cccEEEEEECCCCeEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCccCeEEEEec
Confidence 6799999998888899998 6899998853 232 3333333466677777654
No 70
>3h6r_A Clitocypin analog; cysteine proteinase inhibitor, kunitz inhibitor, beta trefoil; 1.95A {Clitocybe nebularis} PDB: 3h6r_B 3h6s_E
Probab=40.87 E-value=25 Score=28.61 Aligned_cols=41 Identities=15% Similarity=0.179 Sum_probs=27.7
Q ss_pred EeCCceEEecc---------CceeEEEecCCCeeEEecccCCCcce--EEEE
Q psy2222 144 FEDDNMALLGA---------NQCFMSVSEQDDSIVATSRKAGKNEM--VKLR 184 (264)
Q Consensus 144 ~~~g~~alq~~---------ng~fLs~~~~~~~l~a~s~~~g~~e~--~~iR 184 (264)
+.||.|.|++. .|.|++.++-+..+++-.....+.++ |.|.
T Consensus 4 ~~dG~YtLra~~~~~P~~g~GG~YAT~nG~d~iVt~a~~~P~~~erQ~W~I~ 55 (152)
T 3h6r_A 4 LEDGTYRLRAVTTHNPDPGVGGEYATVEGARQPVKAEPSTPPFSEQQIWQVT 55 (152)
T ss_dssp CCSEEEEEEEEESSSSCCCSCCEEEECCSTTSBCEEEESCTTTGGGSCEEEE
T ss_pred ccCceEEEEeccccCCccccCceEEecCCCCCcEEeCCcCCCccccceEEee
Confidence 34788888886 78888887766545655555555554 6666
No 71
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=40.82 E-value=51 Score=30.82 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=48.6
Q ss_pred eEEEEecC--CeEEEEecCCcEEEeccCCCCCCceEEEEe---CCceEEeccC--ceeEEEecCCCeeEEeccc----CC
Q psy2222 108 KVAFKSGF--DKYLSIDKNGRVTGRSDAVGPLEQWEPVFE---DDNMALLGAN--QCFMSVSEQDDSIVATSRK----AG 176 (264)
Q Consensus 108 ~~~lKs~~--GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~---~g~~alq~~n--g~fLs~~~~~~~l~a~s~~----~g 176 (264)
.++|++.. |.||.-......+..........+|.++.- .+.+.|++.| |.||...... |...... -.
T Consensus 322 ~~s~~s~~~pg~ylrh~~~~v~l~~~~~~~~d~tf~~~~gl~~~~~~s~~s~~ypg~~lr~~~~~--~~~~~~~~~~~~~ 399 (468)
T 3akh_A 322 PVRFSSYNYPDRYIRHWDFRARIEANVTNLADSQFRVVTGLAGSGTISLESANYPGYYLRHKNYE--VWVEKNDGSSAFK 399 (468)
T ss_dssp CBCEEESSSTTCEEEEETTEEEEESSCSSGGGGCEEEEECTTCTTCEEEEESSSTTEEEEEETTE--EEEEECCSCHHHH
T ss_pred ccccccccccccEEEEecCcEEEccCCCCcccceEEEccCCCCCceEEEEEEeCCCeEEEEECCE--EEEecCCCCcccc
Confidence 35777754 899986655332222223346889999875 3678999985 9999986553 4443211 12
Q ss_pred CcceEEEEEc
Q psy2222 177 KNEMVKLRSN 186 (264)
Q Consensus 177 ~~e~~~iR~~ 186 (264)
...+|+++-.
T Consensus 400 ~~atf~~~~g 409 (468)
T 3akh_A 400 NDASFSRRAG 409 (468)
T ss_dssp HHTCEEEEEC
T ss_pred CCCcEEEecC
Confidence 4677887764
No 72
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=34.30 E-value=41 Score=32.16 Aligned_cols=75 Identities=8% Similarity=0.197 Sum_probs=46.6
Q ss_pred eEEEEecC----CeEEEEecCCcEEEe------ccCCCCCCceEEEEe---CCceEEeccC--ceeEEEecCCCeeEEec
Q psy2222 108 KVAFKSGF----DKYLSIDKNGRVTGR------SDAVGPLEQWEPVFE---DDNMALLGAN--QCFMSVSEQDDSIVATS 172 (264)
Q Consensus 108 ~~~lKs~~----GkYLs~d~~G~v~a~------a~a~g~~E~f~iv~~---~g~~alq~~n--g~fLs~~~~~~~l~a~s 172 (264)
.|+|++.. ++||.-. ++.+.-. ..+.....+|.+++- .+-++|++.+ |+||...... |.-..
T Consensus 332 ~VSLrs~s~n~PgrYLRH~-~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd~g~VSFES~n~PG~YLRH~n~~--LrL~~ 408 (482)
T 1wd3_A 332 VVSLRVTTPGYTTRYIAHT-DTTVNTQVVDDDSSTTLKEEASWTVVTGLANSQCFSFESVDTPGSYIRHYNFE--LLLNA 408 (482)
T ss_dssp EEEEEECSTTCTTEEEEEE-TTEEEEEECCTTSCHHHHHHTCEEEEECSSCTTSEEEEESSSTTEEEEEETTE--EEEEE
T ss_pred eEEEEECcCCCCCeEEEEc-CCcEEEEecccCCCcccccceeEEEeccccCCCeEEEEecCCCCceEEEeCCE--EEEec
Confidence 67888765 8999854 4444211 122334688999875 4789999987 9999875443 44322
Q ss_pred cc----CCCcceEEEEE
Q psy2222 173 RK----AGKNEMVKLRS 185 (264)
Q Consensus 173 ~~----~g~~e~~~iR~ 185 (264)
.. -....+|+++-
T Consensus 409 ~DgS~~FrqDATF~~~~ 425 (482)
T 1wd3_A 409 NDGTKQFHEDATFCPQA 425 (482)
T ss_dssp CCCCHHHHHHTCEEEEE
T ss_pred CCCCcccccCceeEecc
Confidence 11 12356677664
No 73
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=33.15 E-value=1.1e+02 Score=22.12 Aligned_cols=41 Identities=7% Similarity=0.115 Sum_probs=24.8
Q ss_pred EEEec-CCcEEEeccCCCCCCceEEEEe-CCceEEe---ccCceeEE
Q psy2222 119 LSIDK-NGRVTGRSDAVGPLEQWEPVFE-DDNMALL---GANQCFMS 160 (264)
Q Consensus 119 Ls~d~-~G~v~a~a~a~g~~E~f~iv~~-~g~~alq---~~ng~fLs 160 (264)
++-+. +..++-....++.. ...|.+. +|.|.|. +.||+||.
T Consensus 29 iGR~~~~~di~l~d~~vSr~-Ha~i~~~~~~~~~l~Dl~S~nGt~vn 74 (106)
T 3gqs_A 29 VGSDPQVADIVLSDMSISRQ-HAKIIIGNDNSVLIEDLGSKNGVIVE 74 (106)
T ss_dssp EESCTTTCSEECCCTTSCSS-CEEEEECTTSCEEEEECSCSSCCEET
T ss_pred EeECCCcCCEEeCCCCcchh-hcEEEECCCCcEEEEECcCCCCeEEC
Confidence 34343 33444444455543 5677777 6888887 45899983
No 74
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=31.27 E-value=76 Score=24.47 Aligned_cols=64 Identities=13% Similarity=0.168 Sum_probs=38.5
Q ss_pred EEEEEecCC--eEEEEecCCeEEEEecCCc---------EEEeccCCCCCCceEEEEe-CCc--eEEeccCceeEEEec
Q psy2222 99 FTAILVNDS--KVAFKSGFDKYLSIDKNGR---------VTGRSDAVGPLEQWEPVFE-DDN--MALLGANQCFMSVSE 163 (264)
Q Consensus 99 f~~~~v~dt--~~~lKs~~GkYLs~d~~G~---------v~a~a~a~g~~E~f~iv~~-~g~--~alq~~ng~fLs~~~ 163 (264)
|.+-...++ .|.||..+|.-|... .+- +-.-.......+.|++... +|+ |.|++.||-.|...+
T Consensus 5 FEi~~~~~g~~rFrLka~NgeiI~sS-e~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~NgqvIg~Se 82 (118)
T 2k49_A 5 YELSKSSNDQFKFVLKAGNGEVILTS-ELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAANHQIIGTSQ 82 (118)
T ss_dssp EEEEECTTSCEEEEEECSSSCEEEEC-CCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECTTCCEEEEBC
T ss_pred EEEEEcCCCCEEEEEEECCCCEEEEC-CCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcCCCcEEEEcC
Confidence 555555565 788998888877742 221 1001112234577888665 676 457777887777653
No 75
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3
Probab=29.62 E-value=2.2e+02 Score=26.14 Aligned_cols=63 Identities=16% Similarity=0.282 Sum_probs=41.1
Q ss_pred eEEEEec-CCeEEEEecCCcEEEeccCC-C-C-CCceEEEEeCCceEEecc-CceeEEEecCCCeeEE
Q psy2222 108 KVAFKSG-FDKYLSIDKNGRVTGRSDAV-G-P-LEQWEPVFEDDNMALLGA-NQCFMSVSEQDDSIVA 170 (264)
Q Consensus 108 ~~~lKs~-~GkYLs~d~~G~v~a~a~a~-g-~-~E~f~iv~~~g~~alq~~-ng~fLs~~~~~~~l~a 170 (264)
.+..+.. .|+|+.+...+..++..... . . ..+|.++-.+|...|++. +|.||.+......+.+
T Consensus 291 ~~~~~~~~~g~~~~~~~~~g~~~yg~~~~~~~~~~~W~~~~~~g~~~ikn~~tg~y~~~~~~~~~~~~ 358 (420)
T 1ups_A 291 NYLIRNRQTGKFLYIEENNDKVSYGDITLKNEKNAKWSKEYRDGYTLLKNNETGEYLNIENQTGYIEH 358 (420)
T ss_dssp EEEEEETTTCCEEECCTTCSSCEEECCCTTTTGGGCEEEEEETTEEEEEETTTCCEEECTTCCSBCEE
T ss_pred cccccccCCCcEEEEeccCCeeeccCcccCCCcCceeEEEecCCcEEEeeccccceEccccCCCcccc
Confidence 4566664 79999976653333333322 2 2 248999888899899974 8999999775332333
No 76
>2e4m_C HA-17; botulinum toxin, hemagglutinin subcomponent complex; 1.85A {Clostridium botulinum}
Probab=29.12 E-value=2.1e+02 Score=22.47 Aligned_cols=77 Identities=14% Similarity=0.251 Sum_probs=51.1
Q ss_pred CcEEEEcCCCceEeeccCCCCCCCCccccEEEEEecCC-eEEEEe--cCCeEEEEecCCcEEEeccCCCCCCceEEEEeC
Q psy2222 70 RTFVSALDNGLFILGAIHEDKEGPSPEEIFTAILVNDS-KVAFKS--GFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFED 146 (264)
Q Consensus 70 ~~yL~a~~~G~f~~~~~~~~~e~~~~~evf~~~~v~dt-~~~lKs--~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~~ 146 (264)
--||.-.+ |..+.... +-.--|-|.++-++.. .|.|+. ...+||+-+..|.|++++..-. .-|.|+
T Consensus 22 SlyL~~~s-g~ltf~~~-----ssanNQKWkl~Y~s~k~~ykisNiA~pnkyLaynd~~fI~l~S~snk--~yW~P~--- 90 (146)
T 2e4m_C 22 SLYLTYSS-GSLSFLNT-----SSLDNQKWKLEYISSSNGFRFSNVAEPNKYLAYNDYGFIYLSSSSNN--SLWNPI--- 90 (146)
T ss_dssp SEEEEECS-SCEEEEEC-----CSSGGGCEEEEECSTTCSEEEEETTEEEEEEEECTTSBEEEESCSSC--CCEEEE---
T ss_pred cEEecccC-CeEEEecc-----CCcCcceeEEEEeecCCeEEeeecCCCceEEEEcccCcEEEEcCCCc--ceEEEE---
Confidence 45666543 44443222 2234589999999887 788887 4789999999999999775444 577774
Q ss_pred CceEEeccCceeEEEe
Q psy2222 147 DNMALLGANQCFMSVS 162 (264)
Q Consensus 147 g~~alq~~ng~fLs~~ 162 (264)
+..+|.|+-+.
T Consensus 91 -----kia~n~Yii~n 101 (146)
T 2e4m_C 91 -----KIAINSYIICT 101 (146)
T ss_dssp -----EEETTEEEEEE
T ss_pred -----EecCcEEEEEE
Confidence 34455555443
No 77
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=27.09 E-value=1.6e+02 Score=22.56 Aligned_cols=66 Identities=8% Similarity=0.016 Sum_probs=36.5
Q ss_pred CccccEEEEEecCC--eEEEEecCCeEEEEecCCcEEEeccC----CCCCCceEEEE-eCCceEEe---ccCceeEE
Q psy2222 94 SPEEIFTAILVNDS--KVAFKSGFDKYLSIDKNGRVTGRSDA----VGPLEQWEPVF-EDDNMALL---GANQCFMS 160 (264)
Q Consensus 94 ~~~evf~~~~v~dt--~~~lKs~~GkYLs~d~~G~v~a~a~a----~g~~E~f~iv~-~~g~~alq---~~ng~fLs 160 (264)
.+...|.+.+.... .|.|.....--++=+.+..++-.... ++ .....|.+ .+|.|.|. +.||+||-
T Consensus 5 ~~~~~w~l~~~G~~~~~~~l~~~~~~~IGR~~~~di~l~~~~~~~~VS-r~Ha~i~~~~~g~~~l~Dl~S~NGT~vN 80 (138)
T 2pie_A 5 AGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMIS-RNHCVLKQNPEGQWTIMDNKSLNGVWLN 80 (138)
T ss_dssp GGCEEEEEEETTCSSCBEEECTTCCEEEESSSSSSEECCCSSCTTSSC-SSCEEEEECTTSCEEEEECSCSSCEEET
T ss_pred CCCccEEEEEeCCCCCEEEecCCCeEEECCCCCCCEEeCCCCcCCCCC-hhHeEEEEcCCCcEEEEECCCCCCeEEC
Confidence 34556777776443 56664322223333333334333333 44 44567777 47888886 45899983
No 78
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=26.54 E-value=1.4e+02 Score=23.30 Aligned_cols=64 Identities=16% Similarity=0.182 Sum_probs=40.0
Q ss_pred cEEEEEecCC--eEEEEecCCeEEEEecCCc---------EEEeccCCCCCCceEEEEe-CCc--eEEeccCceeEEEe
Q psy2222 98 IFTAILVNDS--KVAFKSGFDKYLSIDKNGR---------VTGRSDAVGPLEQWEPVFE-DDN--MALLGANQCFMSVS 162 (264)
Q Consensus 98 vf~~~~v~dt--~~~lKs~~GkYLs~d~~G~---------v~a~a~a~g~~E~f~iv~~-~g~--~alq~~ng~fLs~~ 162 (264)
.|.+....++ .|.||..+|.-|... .+- +-.-.......+.|++... +|+ |.|++.||.-|...
T Consensus 20 ~FEi~~~~~G~~rfrLka~NGeiI~sS-e~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~NgqvIa~S 97 (130)
T 2k8e_A 20 WFELSKSSDNQFRFVLKAGNGETILTS-ELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSS 97 (130)
T ss_dssp EEEEEECTTCCEEEEEECTTSCEEEEC-CCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTTSCEEEEC
T ss_pred eEEEEEcCCCCEEEEEEeCCCCEEEEc-CCcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCCCCEEEEc
Confidence 5666666666 789999888877654 211 1111112334578888766 675 46777888887754
No 79
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=25.97 E-value=1.5e+02 Score=24.22 Aligned_cols=76 Identities=17% Similarity=0.288 Sum_probs=47.4
Q ss_pred eEEEEe-cCCeEEEEec--------CCcEEEeccC-C-CCCCceEEEEe------CCceEEecc-CceeEEEecCC----
Q psy2222 108 KVAFKS-GFDKYLSIDK--------NGRVTGRSDA-V-GPLEQWEPVFE------DDNMALLGA-NQCFMSVSEQD---- 165 (264)
Q Consensus 108 ~~~lKs-~~GkYLs~d~--------~G~v~a~a~a-~-g~~E~f~iv~~------~g~~alq~~-ng~fLs~~~~~---- 165 (264)
.|+|+= ..|+||.+.. ...|+|.... . .+...|.|+.. +..|.|+-. .|+||.+.+..
T Consensus 74 ~IRL~H~~T~~~Lhsh~~~~p~s~~~~EVs~~g~~~~gd~~d~W~vei~~~~~~~~~~fRL~H~~tg~yL~~~~~~lp~w 153 (187)
T 1t9f_A 74 KIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVICNGDEWLESEQFKLRHAVTGSYLSLSGQQFGRP 153 (187)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCTTSEEEEEECCTTTCCGGGCEEEECSSSSCBTTSEEEEEETTTCCEEEEEEEECCTT
T ss_pred EEEEEECCCCCCEeECCcCCCCCCCceEEEEecccCCCCCCCeEEEEEcCCEEecCCeEEEEECCcCeEEecCCcccCCC
Confidence 788886 5799999953 1236776542 2 23456998854 345677653 89999986632
Q ss_pred ----CeeEEecccCCCcceEEEE
Q psy2222 166 ----DSIVATSRKAGKNEMVKLR 184 (264)
Q Consensus 166 ----~~l~a~s~~~g~~e~~~iR 184 (264)
..|.|... ......|.|-
T Consensus 154 ~~~Q~EV~~~~~-~~~~~~W~ve 175 (187)
T 1t9f_A 154 IHGQREVVGTDS-ITGGSAWKVA 175 (187)
T ss_dssp STTCEEEEEESS-CCTTCCEEEE
T ss_pred CCCceEEEEecC-CCCCCEEEEC
Confidence 12455433 3566777664
No 80
>3h6r_A Clitocypin analog; cysteine proteinase inhibitor, kunitz inhibitor, beta trefoil; 1.95A {Clitocybe nebularis} PDB: 3h6r_B 3h6s_E
Probab=22.04 E-value=1.7e+02 Score=23.60 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=31.8
Q ss_pred CCeEEEEecCC-cEEEeccCCCCCCc--eEEEEe-CCceEEecc--Ccee---EEEe
Q psy2222 115 FDKYLSIDKNG-RVTGRSDAVGPLEQ--WEPVFE-DDNMALLGA--NQCF---MSVS 162 (264)
Q Consensus 115 ~GkYLs~d~~G-~v~a~a~a~g~~E~--f~iv~~-~g~~alq~~--ng~f---Ls~~ 162 (264)
.|.|++.+.-+ .|++....++.-|. |.|... ++.|.|.-. ++.| ++.+
T Consensus 24 GG~YAT~nG~d~iVt~a~~~P~~~erQ~W~I~~gk~d~YTI~~~~~~~~~~g~ws~~ 80 (152)
T 3h6r_A 24 GGEYATVEGARQPVKAEPSTPPFSEQQIWQVTRNSDGQYTIKYQGLNAPFEYGFSYD 80 (152)
T ss_dssp CCEEEECCSTTSBCEEEESCTTTGGGSCEEEEECTTSCEEEEESSSCSSSCCEEECS
T ss_pred CceEEecCCCCCcEEeCCcCCCccccceEEeecCCCceEEEEEcccCCccccccccC
Confidence 78899886543 46666666666665 988843 578877654 4455 5665
No 81
>3vwc_A Serine protease inhibitor 1; sulphur SAD phasing, beta trefoil, serine proteas hydrolase inhibitor; 1.50A {Coprinopsis cinerea} PDB: 3n0k_A
Probab=21.36 E-value=3.2e+02 Score=21.89 Aligned_cols=63 Identities=5% Similarity=0.058 Sum_probs=41.3
Q ss_pred cccEEEEEecCCeEEEEecCCeEEEEecCCcEEEeccCCCCCCceEEEEeC----CceEEecc--CceeEEE
Q psy2222 96 EEIFTAILVNDSKVAFKSGFDKYLSIDKNGRVTGRSDAVGPLEQWEPVFED----DNMALLGA--NQCFMSV 161 (264)
Q Consensus 96 ~evf~~~~v~dt~~~lKs~~GkYLs~d~~G~v~a~a~a~g~~E~f~iv~~~----g~~alq~~--ng~fLs~ 161 (264)
-+.|+++... +.+.|+.. |.=+.. .+|.|-|.--.....+.|.|..+. ..|.|++. ++.++.-
T Consensus 43 ~~~w~ve~~g-~~Y~L~~~-G~Pta~-iDg~VFa~Ll~~~~~~kW~it~~pq~g~~~y~I~~~s~~~GWv~P 111 (149)
T 3vwc_A 43 GNSWVVEKDD-DAYILYCK-GAPVAP-QEGKLFADLLGNMEDKKWIVTHQPQHGENVFTVVNASTEHGWVVP 111 (149)
T ss_dssp TCCEEEEEET-TEEEEEET-TEEEEE-ETTEEEECSSSCCCCCCEEEEECGGGCTTEEEEEETTTCCEEECC
T ss_pred cceEEEEecC-CEEEEEeC-CCCcee-eCCcEEEEeecCCCCcEEEEEeCcccCCceEEEEcCCcCCceEcc
Confidence 3668888743 45666653 333333 578888888777889999999652 56788864 3455554
No 82
>2vxt_I Interleukin-18; FAB, IL-18, secreted, cytokine, autoimmunity, glycoprotein, cells, immunoglobulin domain, immunoglobulin V region; 1.49A {Homo sapiens} PDB: 1j0s_A 3f62_B
Probab=21.02 E-value=3.3e+02 Score=22.04 Aligned_cols=67 Identities=22% Similarity=0.226 Sum_probs=40.4
Q ss_pred CCCC-CEEEEeCC-C-cEEEEcCCCc-eEee-ccCCCCC-CCCccccEEEEEecCC--eEEEEe--cCCeEEEEecCCc
Q psy2222 58 DIVG-AISIEFGK-R-TFVSALDNGL-FILG-AIHEDKE-GPSPEEIFTAILVNDS--KVAFKS--GFDKYLSIDKNGR 126 (264)
Q Consensus 58 dI~G-p~~i~~~s-~-~yL~a~~~G~-f~~~-~~~~~~e-~~~~~evf~~~~v~dt--~~~lKs--~~GkYLs~d~~G~ 126 (264)
+-.| ||.|.... . .||+|.+... |.-. .|....+ . ..=+|.-..++|. +.+|+| +-|-||+|.++..
T Consensus 56 ~~~g~pVtlsVs~~~~~~vscqnk~V~fkEme~P~~I~d~~--sdiiFF~e~i~g~~sK~~FeSsl~p~~FLA~e~e~~ 132 (157)
T 2vxt_I 56 QPRGMAVTISVKAEKISTLSAENKIISFKEMNPPDNIKDTK--SDIIFFQRSVPGHDNKMQFESSSYEGYFLAAEKERD 132 (157)
T ss_dssp TTTEEEEEEEEESSSEEEEECGGGCCEEEECCCCSEESSSC--STTCEEEEEETTEEEEEEEEESSSTTEEEEEEEETT
T ss_pred CCCCceEEEEEecCceEEEEeCCCEEEeecCCCCCccCCCc--cceEEEEecCCCCCCceeEEeccCcceeEEEcchhh
Confidence 3355 67777766 4 6899976432 3222 1221111 1 1236777777765 899999 4899999987644
No 83
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=20.09 E-value=3.6e+02 Score=22.03 Aligned_cols=96 Identities=14% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCeeeccccCCCCCCEEEEeCC-CcEEEEcCCC-c--eEeeccCCC-CCCCCccccEEEEE-ecCCeEEEEe--cCCeE
Q psy2222 47 YAGWTQVKHIKDIVGAISIEFGK-RTFVSALDNG-L--FILGAIHED-KEGPSPEEIFTAIL-VNDSKVAFKS--GFDKY 118 (264)
Q Consensus 47 ~~~W~~~~~~~dI~Gp~~i~~~s-~~yL~a~~~G-~--f~~~~~~~~-~e~~~~~evf~~~~-v~dt~~~lKs--~~GkY 118 (264)
+++|+.-+.... .-||++-+.. ..||+|...| . +.+-..... -......--|+..+ ..+++..|.| +-|=|
T Consensus 61 ~~~~~~~~~~~~-~~PV~LgI~~~~l~LsC~k~~~~PtLqLe~~~i~~~~~~~~~k~FlFy~~~~Gs~stFESaa~PGWF 139 (171)
T 3ltq_A 61 NDGWIEGDELYD-KIPVALGLKEKNLYLSCVLKDDKPTLQLESVDPKNYPKKKMEKRFVFNKIEINNKLEFESAQFPNWY 139 (171)
T ss_dssp CSSSCCGGGEEE-EEEEEEEETTTCEEEEEEEETTEEEEEEEECCGGGCSCSSCCGGGEEEEEEETTEEEEEESSSTTCE
T ss_pred cccccccccccC-CceEEEEEcCCCEEEEEEeeCCeeEEEEeecCcccccCcccccccEEEEECCCCceEEEecCCCCCE
Confidence 456664322222 1278888887 8899996544 3 222222211 00112223455544 3445889999 47888
Q ss_pred EEEecC-CcEEEeccCCC--CCCceEEE
Q psy2222 119 LSIDKN-GRVTGRSDAVG--PLEQWEPV 143 (264)
Q Consensus 119 Ls~d~~-G~v~a~a~a~g--~~E~f~iv 143 (264)
|+.... +..+.-....| ....|.+.
T Consensus 140 I~Ts~~~~qPV~Lt~~~G~~~~TdF~~~ 167 (171)
T 3ltq_A 140 ISTSQAENMPVFLGGTKGGQDITDFTMQ 167 (171)
T ss_dssp EEBCSSTTEECEEECCCSSSSBCCEEEE
T ss_pred EeecCCCCeeEEeeCCCCCcceeeEEEE
Confidence 876433 33444443332 33445443
Done!