BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2238
(311 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VAU9|ZN330_DROME Zinc finger protein 330 homolog OS=Drosophila melanogaster GN=Noa36
PE=1 SV=1
Length = 315
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/248 (80%), Positives = 224/248 (90%), Gaps = 2/248 (0%)
Query: 1 MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQS 60
MPKKKTGQRKKAEK KLR KEIRS ++ +A+ PCNA MECDKC++KQK+RAFCYFCQS
Sbjct: 1 MPKKKTGQRKKAEKQKLRLKEIRSR--EVPLADLPCNAPMECDKCEKKQKSRAFCYFCQS 58
Query: 61 VQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHAC 120
+QRLP C CGKIKCMLKTGDCV+KH GV++TG+GMVGAICDFCEAW+CHGRKCLQ HAC
Sbjct: 59 IQRLPICAQCGKIKCMLKTGDCVVKHPGVYTTGLGMVGAICDFCEAWVCHGRKCLQNHAC 118
Query: 121 TCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK 180
TCPLQ+A CLECERGVW+HGGR++KC FC GFLCEDDQFEHQASCQVLESENYKC+SCNK
Sbjct: 119 TCPLQNATCLECERGVWEHGGRIFKCSFCNGFLCEDDQFEHQASCQVLESENYKCQSCNK 178
Query: 181 LGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQL 240
LGQYSCLRCK C+CEDH RRKGFKY+KNKPIPCPKC ++TS TKDLSMSTRSHKFGRQQ
Sbjct: 179 LGQYSCLRCKTCYCEDHVRRKGFKYDKNKPIPCPKCNYDTSVTKDLSMSTRSHKFGRQQQ 238
Query: 241 NGDDYDDE 248
G+ D+E
Sbjct: 239 GGNSDDEE 246
>sp|Q32LC9|ZN330_BOVIN Zinc finger protein 330 OS=Bos taurus GN=ZNF330 PE=2 SV=1
Length = 320
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/269 (68%), Positives = 212/269 (78%), Gaps = 8/269 (2%)
Query: 1 MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQS 60
MPKKKTG RKKAE + R+K++R++R + +A+ PCNA+MECDKC+R+QKNRAFCYFC S
Sbjct: 1 MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
Query: 61 VQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHAC 120
VQ+LP C CGK KCM+K+ DCVIKHAGV+STG+ MVGAICDFCEAW+CHGRKCL THAC
Sbjct: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
Query: 121 TCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK 180
CPL DA C+ECERGVWDHGGR++ C FC FLCEDDQFEHQASCQVLE+E +KC SCN+
Sbjct: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
Query: 181 LGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQL 240
LGQ+SCLRCK CFC+DH R K FK EK K PCPKCG ET +TKDLSMSTRS KFGRQ
Sbjct: 181 LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQ-- 238
Query: 241 NGDDYDDEDDDYD------VGGGYSGFSY 263
G + D YD Y+G SY
Sbjct: 239 TGGEEGDGASGYDAYWKNLASDKYAGASY 267
>sp|Q5R9D9|ZN330_PONAB Zinc finger protein 330 OS=Pongo abelii GN=ZNF330 PE=2 SV=1
Length = 320
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/254 (70%), Positives = 207/254 (81%), Gaps = 2/254 (0%)
Query: 1 MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQS 60
MPKKKTG RKKAE + R+K++R++R + +A+ PCNA+MECDKC+R+QKNRAFCYFC S
Sbjct: 1 MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
Query: 61 VQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHAC 120
VQ+LP C CGK KCM+K+ DCVIKHAGV+STG+ MVGAICDFCEAW+CHGRKCL THAC
Sbjct: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
Query: 121 TCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK 180
CPL DA C+ECERGVWDHGGR++ C FC FLCEDDQFEHQASCQVLE+E +KC SCN+
Sbjct: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
Query: 181 LGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQL 240
LGQ+SCLRCK CFC+DH R K FK EK K PCPKCG ET +TKDLSMSTRS KFGRQ
Sbjct: 181 LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQ-- 238
Query: 241 NGDDYDDEDDDYDV 254
G + D YD
Sbjct: 239 TGGEEGDGASGYDA 252
>sp|Q9Y3S2|ZN330_HUMAN Zinc finger protein 330 OS=Homo sapiens GN=ZNF330 PE=1 SV=1
Length = 320
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/254 (70%), Positives = 207/254 (81%), Gaps = 2/254 (0%)
Query: 1 MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQS 60
MPKKKTG RKKAE + R+K++R++R + +A+ PCNA+MECDKC+R+QKNRAFCYFC S
Sbjct: 1 MPKKKTGARKKAENRREREKQLRASRSTIDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
Query: 61 VQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHAC 120
VQ+LP C CGK KCM+K+ DCVIKHAGV+STG+ MVGAICDFCEAW+CHGRKCL THAC
Sbjct: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
Query: 121 TCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK 180
CPL DA C+ECERGVWDHGGR++ C FC FLCEDDQFEHQASCQVLE+E +KC SCN+
Sbjct: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
Query: 181 LGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQL 240
LGQ+SCLRCK CFC+DH R K FK EK K PCPKCG ET +TKDLSMSTRS KFGRQ
Sbjct: 181 LGQHSCLRCKACFCDDHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQ-- 238
Query: 241 NGDDYDDEDDDYDV 254
G + D YD
Sbjct: 239 TGGEEGDGASGYDA 252
>sp|O70524|ZN330_CRIGR Zinc finger protein 330 OS=Cricetulus griseus GN=ZNF330 PE=2 SV=1
Length = 317
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/254 (70%), Positives = 207/254 (81%), Gaps = 2/254 (0%)
Query: 1 MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQS 60
MPKKKTG RKKAE + R+K++R++R + +A+ PCNA+MECDKC+R+QKNRAFCYFC S
Sbjct: 1 MPKKKTGPRKKAENRREREKQLRASRSTVDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
Query: 61 VQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHAC 120
VQ+LP C CGK KCM+K+ DCVIKHAGV+STG+ MVGAICDFCEAW+CHGRKCL THAC
Sbjct: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
Query: 121 TCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK 180
CPL DA C+ECERGVWDHGGR++ C FC FLCEDDQFEHQASCQVLE+E +KC SCN+
Sbjct: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
Query: 181 LGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQL 240
LGQ+SCLRCK CFC++H R K FK EK K PCPKCG ET +TKDLSMSTRS KFGRQ
Sbjct: 181 LGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQ-- 238
Query: 241 NGDDYDDEDDDYDV 254
G + D YD
Sbjct: 239 TGGEEGDGASGYDA 252
>sp|Q922H9|ZN330_MOUSE Zinc finger protein 330 OS=Mus musculus GN=Znf330 PE=2 SV=1
Length = 316
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 174/238 (73%), Positives = 202/238 (84%)
Query: 1 MPKKKTGQRKKAEKMKLRQKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQS 60
MPKKKTG RKKAE + R+K++R++R + +A+ PCNA+MECDKC+R+QKNRAFCYFC S
Sbjct: 1 MPKKKTGARKKAENRREREKQLRASRSTVDLAKHPCNASMECDKCQRRQKNRAFCYFCNS 60
Query: 61 VQRLPQCGHCGKIKCMLKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHAC 120
VQ+LP C CGK KCM+K+ DCVIKHAGV+STG+ MVGAICDFCEAW+CHGRKCL THAC
Sbjct: 61 VQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHAC 120
Query: 121 TCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK 180
CPL DA C+ECERGVWDHGGR++ C FC FLCEDDQFEHQASCQVLE+E +KC SCN+
Sbjct: 121 ACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNR 180
Query: 181 LGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQ 238
LGQ+SCLRCK CFC++H R K FK EK K PCPKCG ET +TKDLSMSTRS KFGRQ
Sbjct: 181 LGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQ 238
>sp|G3V893|ZN335_RAT Zinc finger protein 335 OS=Rattus norvegicus GN=Znf335 PE=1 SV=1
Length = 1336
Score = 38.1 bits (87), Expect = 0.077, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 142 RVYKCCFCEGFLCEDDQ--FEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHAR 199
R +KC FCE F+CED + HQ S + + +KC C Y R F H
Sbjct: 619 RRFKCEFCE-FVCEDKKALLNHQLSH--VSDKPFKCSFC----PYRTFRED--FLLSHV- 668
Query: 200 RKGFKYEKNKPIPCPKCGFETSQTKDLSMSTR 231
K+ KP C C F T K+L + R
Sbjct: 669 --AVKHTGAKPFACEYCHFSTRHKKNLRLHVR 698
>sp|A2A5K6|ZN335_MOUSE Zinc finger protein 335 OS=Mus musculus GN=Znf335 PE=2 SV=1
Length = 1337
Score = 37.7 bits (86), Expect = 0.11, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 142 RVYKCCFCEGFLCEDDQ--FEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHAR 199
R +KC FCE F+CED + HQ S + + +KC C Y R F H
Sbjct: 620 RRFKCEFCE-FVCEDKKALLNHQLSH--VSDKPFKCSFC----PYRTFRED--FLLSHV- 669
Query: 200 RKGFKYEKNKPIPCPKCGFETSQTKDLSMSTR 231
K+ KP C C F T K+L + R
Sbjct: 670 --AVKHTGAKPFACEYCHFSTRHKKNLRLHVR 699
>sp|Q9H4Z2|ZN335_HUMAN Zinc finger protein 335 OS=Homo sapiens GN=ZNF335 PE=1 SV=1
Length = 1342
Score = 37.4 bits (85), Expect = 0.13, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 142 RVYKCCFCEGFLCEDDQ--FEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHAR 199
R +KC FCE F+CED + HQ S + + +KC C Y R F H
Sbjct: 619 RRFKCEFCE-FVCEDKKALLNHQLSH--VSDKPFKCSFC----PYRTFRED--FLLSHV- 668
Query: 200 RKGFKYEKNKPIPCPKCGFETSQTKDLSMSTR 231
K+ KP C C F T K+L + R
Sbjct: 669 --AVKHTGAKPFACEYCHFSTRHKKNLRLHVR 698
>sp|Q9VI93|RN_DROME Zinc finger protein rotund OS=Drosophila melanogaster GN=rn PE=1
SV=2
Length = 946
Score = 35.8 bits (81), Expect = 0.37, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 20/113 (17%)
Query: 142 RVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK-------LGQYSCL------- 187
R Y+C C + + E++ YKC C+K L Q++ +
Sbjct: 486 RKYQCKMCPQIFSSKADLQLHTQIHMREAKPYKCTQCSKAFANSSYLSQHTRIHLGIKPY 545
Query: 188 RCKIC---FCE-DHARRKGFKYEKNKPIPC--PKCGFETSQTKDLSMSTRSHK 234
RC+IC F + H ++ + +KP C P C SQ +L +R H+
Sbjct: 546 RCEICQRKFTQLSHLQQHIRTHTGDKPYKCRHPGCQKAFSQLSNLQSHSRCHQ 598
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 32.7 bits (73), Expect = 3.2, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 34/158 (21%)
Query: 77 LKTGDCVIKHAGVFSTGMGMVGAICDFCEAWICHGRKCLQTHACTCPLQDAVCLECERGV 136
L DC G TG G+ C+ CE C+G H+ C + C +C+
Sbjct: 1539 LSCQDCA---PGYTRTGSGLYLGHCELCE---CNG------HSDLCHPETGACSQCQHNA 1586
Query: 137 WDHGGRVYKCCFCEGFLCEDDQFE----------HQASCQVLESENYKCKSCNKLGQ--Y 184
FCE LC + +C + EN ++C LG Y
Sbjct: 1587 AGE--------FCE--LCAPGYYGDATAGTPEDCQPCACPLTNPENMFSRTCESLGAGGY 1636
Query: 185 SCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQ 222
C C+ + + + G Y N + +C ET+Q
Sbjct: 1637 RCTACEPGYTGQYCEQCGPGYVGNPSVQGGQCLPETNQ 1674
>sp|P16144|ITB4_HUMAN Integrin beta-4 OS=Homo sapiens GN=ITGB4 PE=1 SV=5
Length = 1822
Score = 32.7 bits (73), Expect = 3.5, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 88/256 (34%), Gaps = 59/256 (23%)
Query: 19 QKEIRSARDKMSVAEFPCNANMECDKCKRKQKNRAFCYFCQ--SVQRLPQCGHCGKIKCM 76
QKE+RSAR N + C +C + C S+ + C G+ K
Sbjct: 460 QKEVRSARCSF-------NGDFVCGQCVCSEGWSGQTCNCSTGSLSDIQPCLREGEDKPC 512
Query: 77 LKTGDCVIKHAGVFSTGMGMVGAICDF-------CEAWICHGR-KCLQTH---------- 118
G+C H + G G C++ ++C+ R +C
Sbjct: 513 SGRGECQCGHCVCYGEGR-YEGQFCEYDNFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGP 571
Query: 119 ACTCPLQDAVCLECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKS- 177
+C CPL +A C++ G+ + G C C C C++ NY
Sbjct: 572 SCDCPLSNATCIDSNGGICNGRGH----CECGRCHCHQQSLYTDTICEI----NYSAIHP 623
Query: 178 --CNKLGQYSCLRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKF 235
C L SC++C + + + K C +C F+ +L K
Sbjct: 624 GLCEDL--RSCVQC-----------QAWGTGEKKGRTCEECNFKVKMVDEL-------KR 663
Query: 236 GRQQLNGDDYDDEDDD 251
+ + + DEDDD
Sbjct: 664 AEEVVVRCSFRDEDDD 679
>sp|P18753|ZO84_XENLA Oocyte zinc finger protein XlCOF8.4 (Fragment) OS=Xenopus laevis
PE=2 SV=1
Length = 780
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 184 YSCLRCKICFCEDHARRKGFK-YEKNKPIPCPKCGFETSQTKDLSMSTRSH 233
+SC C CF H R + K + KP PC +CG +++ D+++ R+H
Sbjct: 306 FSCSECGKCFSTPHVRARHQKTHTGEKPFPCSECGKCFARSSDVTVHRRTH 356
>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2
Length = 913
Score = 32.0 bits (71), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 57/166 (34%), Gaps = 30/166 (18%)
Query: 130 LECERGVWDHGGRVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCNK-LGQYSCLR 188
LE R V GG+ YKC C E + + V E YKC+ C K YS L+
Sbjct: 764 LEAHRRVHT-GGKPYKCEVCTKGFSESSRLQAHQRVHV-EGRPYKCEQCGKGFSGYSSLQ 821
Query: 189 CKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSHKFGRQQLNGDDYDDE 248
H G KP C CG SQ +L R H
Sbjct: 822 A------HHRVHTG-----EKPYKCEVCGKGFSQRSNLQAHQRVH-------------TG 857
Query: 249 DDDYDVGGGYSGFSYGGGGATNSRSH---KFGRQQLNGDDYDDEDD 291
+ Y GF + G + R H KF + + G DY ++
Sbjct: 858 EKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSEDYGKDYPSSEN 903
>sp|Q99MD8|MYNN_MOUSE Myoneurin OS=Mus musculus GN=Mynn PE=2 SV=2
Length = 610
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 129 CLECERGVWDHGG-RVYKCCFCEGFLCEDDQFEHQASCQVLESENYKCKSCN-KLGQYSC 186
C + + V H G R YKC C+ + Q + E + YKC CN + S
Sbjct: 342 CNQLKTHVRTHTGERPYKCELCDKGFAQKCQLVFHSRMHHGEEKPYKCDVCNLQFATSSN 401
Query: 187 LRCKICFCEDHARRKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSH 233
L+ HAR K+ KP C +CG +Q L+ R H
Sbjct: 402 LKI-------HAR----KHSGEKPYVCDRCGQRFAQASTLTYHVRRH 437
>sp|Q80X44|ZBT24_MOUSE Zinc finger and BTB domain-containing protein 24 OS=Mus musculus
GN=Zbtb24 PE=1 SV=1
Length = 710
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 184 YSCLRCKICFCEDHARRKG-FKYEKNKPIPCPKCGFETSQTKDLSMSTRSH 233
YSC C CF + A+R+ + KP CP+CG + ++ +L + H
Sbjct: 461 YSCSICGKCFSDSSAKRRHCILHTGKKPFSCPECGLQFARLDNLKAHLKIH 511
>sp|Q9Z2K3|ZN394_RAT Zinc finger protein 394 OS=Rattus norvegicus GN=Znf394 PE=2 SV=1
Length = 536
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
Query: 141 GRVYKCCFCEG-FLCEDDQFEHQASCQVLESENYKCKSCNKLGQYSCLRCKICFCEDHAR 199
GR YKC CE F D F+HQ + + Y+C+ C K S K H R
Sbjct: 325 GRPYKCDNCEKRFRQRSDLFKHQRTH--TGEKPYQCQECGKSFSQSAALVK------HQR 376
Query: 200 RKGFKYEKNKPIPCPKCGFETSQTKDLSMSTRSH 233
+ KP CP+CG Q+ LS R+H
Sbjct: 377 ----THTGEKPYACPECGECFRQSSHLSRHQRTH 406
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.466
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,531,155
Number of Sequences: 539616
Number of extensions: 6223001
Number of successful extensions: 32542
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 567
Number of HSP's that attempted gapping in prelim test: 28937
Number of HSP's gapped (non-prelim): 3078
length of query: 311
length of database: 191,569,459
effective HSP length: 117
effective length of query: 194
effective length of database: 128,434,387
effective search space: 24916271078
effective search space used: 24916271078
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)