BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2240
(182 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q921G7|ETFD_MOUSE Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1
Length = 616
Score = 263 bits (671), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 122/169 (72%), Positives = 145/169 (85%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
V+MERF + ADVVIVG GPAG++AAIRLKQLA + GK+++VCLVEKAA++G H LSGA +
Sbjct: 59 VNMERFAEEADVVIVGAGPAGLSAAIRLKQLAAEQGKDIRVCLVEKAAQIGAHTLSGACL 118
Query: 74 DPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHV 133
DP A EL PDWK+ GAPLNTPV ED+FA LT+ RI +PILPG+PMNNHGNY+VRLGH+
Sbjct: 119 DPAAFKELFPDWKEKGAPLNTPVTEDRFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHL 178
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
V W+GEQAEA+GVE+YPG A+EVLYH DGSVKGIAT DVGI KDG+PK
Sbjct: 179 VSWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPK 227
>sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Rattus norvegicus GN=Etfdh PE=2 SV=1
Length = 616
Score = 260 bits (664), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 121/169 (71%), Positives = 144/169 (85%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
V+MERF + ADVVIVG GPAG++AAIRLKQLA + K+++VCLVEKAA++G H LSGA +
Sbjct: 59 VNMERFAEEADVVIVGAGPAGLSAAIRLKQLAAEQEKDIRVCLVEKAAQIGAHTLSGACL 118
Query: 74 DPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHV 133
DP A EL PDWK+ GAPLNTPV ED+FA LT+ RI +PILPG+PMNNHGNY+VRLGH+
Sbjct: 119 DPAAFKELFPDWKEKGAPLNTPVTEDRFAILTEKHRIPVPILPGLPMNNHGNYIVRLGHL 178
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
V W+GEQAEA+GVE+YPG A+EVLYH DGSVKGIAT DVGI KDG+PK
Sbjct: 179 VSWMGEQAEALGVEVYPGYAAAEVLYHEDGSVKGIATNDVGIQKDGAPK 227
>sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1
Length = 617
Score = 255 bits (651), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/169 (70%), Positives = 143/169 (84%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
V+MERF + ADVVIVG GPAG++AA RLKQLA + K+++VCLVEKAA++G H LSGA +
Sbjct: 60 VNMERFAEEADVVIVGAGPAGLSAAARLKQLAAQHEKDIRVCLVEKAAQIGAHTLSGACL 119
Query: 74 DPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHV 133
DP AL EL PDWK+ GAPLNTPV ED+F LT+ RI +PILPG+PMNNHGNY+VRLGH+
Sbjct: 120 DPRALQELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHL 179
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
V W+GEQAEA+GVE+YPG A+EVL+H DGSVKGIAT DVGI KDG+PK
Sbjct: 180 VSWMGEQAEALGVEVYPGYAAAEVLFHEDGSVKGIATNDVGIQKDGAPK 228
>sp|P55931|ETFD_PIG Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2
Length = 617
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 119/169 (70%), Positives = 141/169 (83%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
V+MERF + ADVVIVG GPAG++AA RLKQLA + K+L+VCLVEKAA +G H LSGA +
Sbjct: 60 VNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACL 119
Query: 74 DPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHV 133
DP A EL PDWK+ GAPLNTPV ED+F LT+ RI +PILPG+PMNNHGNYVVRLGH+
Sbjct: 120 DPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHL 179
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
V W+GEQAEA+GVE+YPG A+E+L+H DGSVKGIAT DVGI KDG+PK
Sbjct: 180 VSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 228
>sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2
Length = 617
Score = 253 bits (645), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 142/169 (84%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
V+MERF + ADVVIVG GPAG++AA+RLKQLA K+++VCLVEKAA++G H LSGA +
Sbjct: 60 VNMERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACL 119
Query: 74 DPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHV 133
DP A EL PDWK+ GAPLNTPV ED+F LT+ RI +PILPG+PMNNHGNY+VRLGH+
Sbjct: 120 DPGAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHL 179
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
V W+GEQAEA+GVE+YPG A+EVL+H DGSVKGIAT DVGI KDG+PK
Sbjct: 180 VSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPK 228
>sp|Q5RDD3|ETFD_PONAB Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1
Length = 617
Score = 253 bits (645), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 118/169 (69%), Positives = 142/169 (84%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
V+MERF + ADVVIVG GPAG++AA+RLKQLA K+++VCLVEKAA++G H LSGA +
Sbjct: 60 VNMERFAEGADVVIVGAGPAGLSAAVRLKQLAAAHEKDIRVCLVEKAAQIGAHTLSGACL 119
Query: 74 DPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHV 133
DP A EL PDWK+ GAPLNTPV ED+F LT+ RI +PILPG+PMNNHGNY+VRLGH+
Sbjct: 120 DPGAFKELFPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHL 179
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
V W+GEQAEA+GVE+YPG A+EVL+H DGSVKGIAT DVGI KDG+PK
Sbjct: 180 VSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATNDVGIQKDGAPK 228
>sp|Q11190|ETFD_CAEEL Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=1
SV=2
Length = 597
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 142/170 (83%)
Query: 13 DVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAV 72
DVD+ R DV DVVIVGGGP+G++AAIRL+QLAEK KEL+VC+VEKA+ +GGH LSGAV
Sbjct: 41 DVDLARESDVYDVVIVGGGPSGLSAAIRLRQLAEKAQKELRVCVVEKASVIGGHTLSGAV 100
Query: 73 IDPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGH 132
I+ AL+EL+P+WK+LGAP+ V + A LT+S RI +P+LPG+P+ NHGNY+VRLG
Sbjct: 101 IETRALDELIPNWKELGAPVYQQVTSESIAILTESGRIPVPVLPGVPLANHGNYIVRLGK 160
Query: 133 VVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
VV+WLGEQAEA GVE++P I ASEVLY+ DGSVKGIAT DVGI KDG+PK
Sbjct: 161 VVQWLGEQAEAAGVEVWPEIAASEVLYNEDGSVKGIATSDVGIGKDGAPK 210
>sp|Q54XM6|ETFD_DICDI Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3
SV=1
Length = 606
Score = 217 bits (553), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 143/179 (79%), Gaps = 6/179 (3%)
Query: 2 LSFGSSKSDQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61
+ F SS+ + D ++F DVVIVG GP+G++ AIRLKQL+EK GK+L+VC+VEK +
Sbjct: 40 IRFFSSEQELPPRDSDQF----DVVIVGAGPSGLSTAIRLKQLSEKAGKDLRVCVVEKGS 95
Query: 62 EVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN 121
EVG HILSGAV+DP ALNEL+PDWK+ GAPL T V +DKF +LT+++ + +P P + M+
Sbjct: 96 EVGSHILSGAVMDPKALNELIPDWKEKGAPLITEVKQDKFYFLTENRSLRLPT-PRL-MH 153
Query: 122 NHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGS 180
N GNY++ LG+VV+WLGEQAE+MGVE+YP ASEVLYH +G+V+GIAT D+GIAKDGS
Sbjct: 154 NEGNYIISLGNVVRWLGEQAESMGVEVYPSFAASEVLYHDNGAVRGIATNDMGIAKDGS 212
>sp|P94132|ETFD_ACIAD Probable electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Acinetobacter sp. (strain ADP1) GN=etfD PE=4 SV=1
Length = 570
Score = 186 bits (471), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 128/172 (74%), Gaps = 5/172 (2%)
Query: 14 VDMERFEDVADVVIVGGGPAGMAAAIRLKQLA-EKDGKELKVCLVEKAAEVGGHILSGAV 72
+ +ER DVVIVG GPAG++AAI+++QLA E + +L VC+VEK +EVG HILSGAV
Sbjct: 2 ITIEREAMEFDVVIVGAGPAGLSAAIKIRQLAIENNLPDLSVCVVEKGSEVGAHILSGAV 61
Query: 73 IDPIALNELLPDWKDLGAPLNTPVHEDKFAYLT---KSKRIGIPILPGMPMNNHGNYVVR 129
++P A+NEL P+WK+ GAPLN PV EDK +L KS+ ++P M+N GNYV+
Sbjct: 62 LEPRAINELFPNWKEEGAPLNVPVTEDKTYFLMSDEKSQEAPHWMVPKT-MHNDGNYVIS 120
Query: 130 LGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSP 181
LG+VV+WLG++AE + V I+PG A+E+LYH DG+VKGI TGD+GI KDG P
Sbjct: 121 LGNVVRWLGQKAEELEVSIFPGFAAAEILYHADGTVKGIQTGDMGIGKDGEP 172
>sp|Q9HZP5|ETFD_PSEAE Electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1
Length = 551
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 120/171 (70%), Gaps = 6/171 (3%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
MER DVVIVG GPAG++AA RLKQ A + G+E+ VC+VEK +EVG HILSGAV +P
Sbjct: 1 MEREYMEFDVVIVGAGPAGLSAACRLKQKAAEAGQEISVCVVEKGSEVGAHILSGAVFEP 60
Query: 76 IALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGM----PMNNHGNYVVRLG 131
ALNEL PDWK+LGAPLNTPV D Y+ KS + P M+N GNY++ LG
Sbjct: 61 RALNELFPDWKELGAPLNTPVTGDDI-YVLKSAESATKV-PNFFVPKTMHNEGNYIISLG 118
Query: 132 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
++ +WL +QAE +GVEIYPG A E L +G V+GI TGD+G+ ++G+PK
Sbjct: 119 NLCRWLAQQAEGLGVEIYPGFAAQEALIDENGVVRGIVTGDLGVDREGNPK 169
>sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1
Length = 632
Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
Query: 11 QFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSG 70
+ D EDV DV IVG GPAG++AAIR+KQ A K ++++V ++EKAAE G H +SG
Sbjct: 80 KLDTIEREVEDV-DVCIVGAGPAGLSAAIRIKQQAAKANRDIRVVVLEKAAEPGNHSVSG 138
Query: 71 AVIDPIALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRL 130
AVI P AL+ELLP+W+D T V DK +L IP+ P M NHGNYV+ L
Sbjct: 139 AVIQPTALDELLPNWRDDPPENCTAVTHDKMKFLIPKLHFPIPVPPA--MKNHGNYVMSL 196
Query: 131 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
+WL +AE GVEIYP ASEVLY+ DGSV G+AT D G+ G PK
Sbjct: 197 AEFTRWLAAKAEEYGVEIYPSFAASEVLYNKDGSVIGVATNDFGVDSKGLPK 248
>sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CIR2 PE=1 SV=1
Length = 631
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 108/171 (63%), Gaps = 7/171 (4%)
Query: 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVEKAAEVGGHILSGAVIDPI 76
R D DV IVGGGPAG+A AI+LKQL G +L+V ++EK++ +GG +SGA+++P
Sbjct: 58 RARDYVDVCIVGGGPAGLATAIKLKQLDNSSGTGQLRVVVLEKSSVLGGQTVSGAILEPG 117
Query: 77 ALNELLPDWK-DLGAPL----NTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLG 131
EL PD K D+G PL T V ++ +L I +P P +N NY+V L
Sbjct: 118 VWKELFPDEKSDIGIPLPKELATLVTKEHLKFLKGKWAISVP-EPSQMINKGRNYIVSLN 176
Query: 132 HVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGSPK 182
VV +LGE+AE +GVE+YPGI S+++Y + +VKG+ T D GI+K G PK
Sbjct: 177 QVVGYLGEKAEEVGVEVYPGIAVSDLIYDENNAVKGVITKDAGISKSGKPK 227
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
+D D ++VG G AG AA+ + + L V ++E+ G ++G + L
Sbjct: 3 DDKFDAIVVGAGVAGSVAALVMARAG------LDVLVIERGDSAGCKNMTGGRLYAHTLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMP-MNNHGNYVVRLGHVVKWLG 138
++P + + AP+ V +K ++LT+ + + P + H +Y V + WL
Sbjct: 57 AIIPGFA-VSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGD 172
EQAE G + PG+ ++ G+ V G+ GD
Sbjct: 116 EQAEQAGAQFIPGVRVDALVREGN-KVTGVQAGD 148
>sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1
Length = 428
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
ED+ D +IVG G AG AA+ L ++G + V ++E+ G ++G + +L
Sbjct: 3 EDIFDAIIVGAGLAGSVAALVLA----REGAQ--VLVIERGNSAGAKNVTGGRLYAHSLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN-NHGNYVVRLGHVVKWLG 138
++P + D AP+ + +K A++T+ + + G + + +Y V WL
Sbjct: 57 HIIPGFAD-SAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAK 177
EQAE G ++ GI L DG V G+ A GDV AK
Sbjct: 116 EQAEEAGAQLITGIRVDN-LVQRDGKVVGVEADGDVIEAK 154
>sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixC PE=3 SV=1
Length = 428
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
ED+ D +IVG G AG AA+ L ++G + V ++E+ G ++G + +L
Sbjct: 3 EDIFDAIIVGAGLAGSVAALVLA----REGAQ--VLVIERGNSAGAKNVTGGRLYAHSLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN-NHGNYVVRLGHVVKWLG 138
++P + D AP+ + +K A++T+ + + G + + +Y V WL
Sbjct: 57 HIIPGFAD-SAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAK 177
EQAE G ++ GI L DG V G+ A GDV AK
Sbjct: 116 EQAEEAGAQLITGIRVDN-LVQRDGKVVGVEADGDVIEAK 154
>sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1
Length = 428
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
ED+ D +IVG G AG AA+ L ++G + V ++E+ G ++G + +L
Sbjct: 3 EDIFDAIIVGAGLAGSVAALVLA----REGAQ--VLVIERGNSAGAKNVTGGRLYAHSLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN-NHGNYVVRLGHVVKWLG 138
++P + D AP+ + +K A++T + + I G + + +Y V WL
Sbjct: 57 RIIPGFAD-QAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAK 177
EQAE G ++ GI V+ DG V G+ A GD+ AK
Sbjct: 116 EQAEEAGAQLITGIRVDNVVQR-DGKVVGVEADGDILEAK 154
>sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1
Length = 428
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
ED+ D +IVG G AG AA+ L ++G + V ++E+ G ++G + +L
Sbjct: 3 EDIFDAIIVGAGLAGSVAALVLA----REGAQ--VLVIERGNSAGAKNVTGGRLYAHSLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN-NHGNYVVRLGHVVKWLG 138
++P + D AP+ + +K A++T+ + + G + + +Y V WL
Sbjct: 57 HIIPGFAD-SAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAK 177
EQAE G ++ GI L DG V G+ A GDV AK
Sbjct: 116 EQAEEAGAQLITGIRVDN-LVQRDGKVVGVEADGDVIEAK 154
>sp|Q8ZRW9|FIXC_SALTY Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixC PE=3 SV=1
Length = 428
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
ED+ D +IVG G AG AA+ L ++G + V ++E+ G ++G + +L
Sbjct: 3 EDIFDAIIVGAGLAGSVAALVLA----REGAQ--VLVIERGNSAGAKNVTGGRLYAHSLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN-NHGNYVVRLGHVVKWLG 138
++P + D AP+ + +K A++T + + I G + + +Y V WL
Sbjct: 57 RIIPGFAD-QAPIERMITHEKLAFMTDNGAMTIDYCNGEDASASQVSYSVLRSKFDAWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAK 177
EQAE G ++ GI V+ DG V G+ A GD+ AK
Sbjct: 116 EQAEEAGAQLITGIRVDNVVQR-DGKVVGVEADGDILEAK 154
>sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1
Length = 428
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN 79
ED+ D +IVG G AG AA+ L ++G + V ++E+ G ++G + +L
Sbjct: 3 EDIFDAIIVGAGLAGSVAALVLA----REGAQ--VLVIERGNSAGAKNVTGGRLYAHSLE 56
Query: 80 ELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMN-NHGNYVVRLGHVVKWLG 138
++P + + AP+ + +K A++T+ + + G + + +Y V WL
Sbjct: 57 HIIPGFAE-SAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLM 115
Query: 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKGI-ATGDVGIAK 177
EQAE G ++ GI L DG V G+ A GDV AK
Sbjct: 116 EQAEEAGAQLITGIRVDN-LVQRDGKVVGVEADGDVIEAK 154
>sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixC PE=3 SV=2
Length = 435
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLP 83
D ++VG G AG AA + L + + LKV +E+ G + GA++ L +L+P
Sbjct: 7 DAIVVGAGMAGNAATLTLAR------RGLKVLQLERGEYSGSKNVQGAILYADMLEKLVP 60
Query: 84 DWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILP-GMPMNNHGNYVVRLGHVVKWLGEQAE 142
D+++ APL + E +F L +G+ Y + KW + +
Sbjct: 61 DFRE-DAPLERHLVEQRFWMLDDRSHVGLHYRSEDFNEEKPNRYTIIRAQFDKWFSSKVK 119
Query: 143 AMGVEIYPGIPASEVLYHGDGSVKGIATGDVG 174
G + +E++ G V G+ T G
Sbjct: 120 EAGATVLCETTVTELVQDAYGKVIGVKTDRSG 151
>sp|Q53208|FIXC_RHISN Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1
Length = 435
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 16/161 (9%)
Query: 17 ERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPI 76
ERF D ++VG G +G AAA + + LKV +E+ G + GA++
Sbjct: 4 ERF----DAIVVGAGMSGNAAAYTMAS------RGLKVLQLERGEYPGSKNVQGAILYAN 53
Query: 77 ALNELLPDWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILP---GMPMNNHGNYVVRLGHV 133
L ++PD++D APL + E +F + G+ P N Y +
Sbjct: 54 MLETIIPDFRD-DAPLERHLVEQRFWVTDDTSHTGMHYRSDDFNEPAPN--RYTIIRAQF 110
Query: 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVG 174
KW + A G + +E+ G V G+ T G
Sbjct: 111 DKWFSRKVRAAGAIVLCETTVTELALDAAGKVIGVHTDRAG 151
>sp|O17953|DLDH_CAEEL Dihydrolipoyl dehydrogenase, mitochondrial OS=Caenorhabditis
elegans GN=dld-1 PE=2 SV=2
Length = 495
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 7 SKSDQFDVDMERFEDV--ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64
+K F V + + AD+V++GGGP G AAI+ QL +K VEK A +G
Sbjct: 12 AKRQFFQVLARNYSNTQDADLVVIGGGPGGYVAAIKAAQLG------MKTVCVEKNATLG 65
Query: 65 GHILSGAVIDPIAL 78
G L+ I AL
Sbjct: 66 GTCLNVGCIPSKAL 79
>sp|P09624|DLDH_YEAST Dihydrolipoyl dehydrogenase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LPD1 PE=1
SV=1
Length = 499
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL 78
DVVI+GGGPAG AAI+ QL VEK ++GG L+ I AL
Sbjct: 28 DVVIIGGGPAGYVAAIKAAQLG------FNTACVEKRGKLGGTCLNVGCIPSKAL 76
>sp|P32318|THI4_YEAST Thiamine thiazole synthase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=THI4 PE=1 SV=1
Length = 326
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 14/90 (15%)
Query: 9 SDQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE------ 62
+ ++ D+++F V+DV+IVG G +G++AA + K+ +LKVC++E +
Sbjct: 53 TSRYFKDLDKFA-VSDVIIVGAGSSGLSAAYVIA----KNRPDLKVCIIESSVAPGGGSW 107
Query: 63 VGGHILSGAVIDPIA---LNELLPDWKDLG 89
+GG + S V+ A L EL ++D G
Sbjct: 108 LGGQLFSAMVMRKPAHLFLQELEIPYEDEG 137
>sp|Q1QX78|STHA_CHRSD Soluble pyridine nucleotide transhydrogenase OS=Chromohalobacter
salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB
13768) GN=sthA PE=3 SV=1
Length = 463
Score = 38.1 bits (87), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLP 83
DVV++G GPAG +AAI A K GK +V +VEK VGG+ I AL +
Sbjct: 7 DVVVIGSGPAGESAAIN----AAKHGK--RVAIVEKQQAVGGNCTHWGTIPSKALRHQVK 60
Query: 84 D---------WKDLGAP 91
++D+G P
Sbjct: 61 QIMQFNTNRMFRDIGEP 77
>sp|A8J9T5|THI4_CHLRE Thiamine thiazole synthase, chloroplastic OS=Chlamydomonas
reinhardtii GN=THI1 PE=3 SV=1
Length = 357
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 11/71 (15%)
Query: 9 SDQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA------AE 62
+ ++ DM+ F + +DVVIVG G AG+A A L ++A LKV L+E++ A
Sbjct: 79 TRRYFKDMDEFAE-SDVVIVGAGSAGLACAFELGRIA----PHLKVALMEQSVAPGGGAW 133
Query: 63 VGGHILSGAVI 73
+GG + S V+
Sbjct: 134 LGGQLFSAMVV 144
>sp|P09820|FIXC_RHIME Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1
Length = 435
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 8/152 (5%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLP 83
D ++VG G +G AAA + + LKV +E+ G + GA++ L ++P
Sbjct: 7 DAIVVGAGMSGNAAAYAMAS------RGLKVLQLERGEYPGSKNVQGAIMYANMLEAIIP 60
Query: 84 DWKDLGAPLNTPVHEDKFAYLTKSKRIGIPILP-GMPMNNHGNYVVRLGHVVKWLGEQAE 142
D+++ APL + E +F + + G+ Y + KWL +
Sbjct: 61 DFRN-DAPLERHLVEQRFWIMDDTSHTGMHYRSDDFNEVTPNRYTIIRAQFDKWLSRKVC 119
Query: 143 AMGVEIYPGIPASEVLYHGDGSVKGIATGDVG 174
G + A+ + + G G+ T G
Sbjct: 120 EAGGTVLCETTATGLEWDSAGKAIGVRTDRAG 151
>sp|Q02733|IRC15_YEAST Increased recombination centers protein 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IRC15 PE=1
SV=1
Length = 499
Score = 37.4 bits (85), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 10 DQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILS 69
D+ ME F V DV+++G GP G AA++ Q L C+ ++A+ G +++
Sbjct: 5 DEILSTMEDFAAVYDVLVIGCGPGGFTAAMQASQ-----AGLLTACVDQRASLGGAYLVD 59
Query: 70 GAVIDPIALNE 80
GAV L E
Sbjct: 60 GAVPSKTLLYE 70
>sp|Q6M083|GGR_METMP Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP0388 PE=3 SV=1
Length = 390
Score = 37.4 bits (85), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 15/74 (20%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
M+ D DVV+VG GPAG A+ A K+G K L+EK+ E+G P
Sbjct: 1 MKALNDSYDVVVVGAGPAGSMASYN----ASKNGA--KTLLIEKSQEIG---------TP 45
Query: 76 IALNELLPDWKDLG 89
+ E +P +D G
Sbjct: 46 VRCAEAVPRLEDFG 59
>sp|A9A6R1|GGR_METM6 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0522
PE=3 SV=1
Length = 390
Score = 37.0 bits (84), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
M D DVV+VG GPAG A+ A K+G K L+EK+ E+G P
Sbjct: 1 MRALNDSYDVVVVGAGPAGSMASYN----ASKNGA--KTLLIEKSQEIG---------TP 45
Query: 76 IALNELLPDWKDLG 89
+ E +P +D G
Sbjct: 46 VRCAEAVPRLEDFG 59
>sp|Q92918|M4K1_HUMAN Mitogen-activated protein kinase kinase kinase kinase 1 OS=Homo
sapiens GN=MAP4K1 PE=1 SV=1
Length = 833
Score = 37.0 bits (84), Expect = 0.080, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 15/163 (9%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
+ER E A I P + A + +D K + C V + A GG L GA+
Sbjct: 571 LERKETRAGNPIAHISPHRLLARKNMVSTKIQDTKGCRACCVAEGASSGGPFLCGALETS 630
Query: 76 IAL-------NELLPDWKDLGAPLNTPVHEDKFAYLT----KSKRIGIPILPGMPMNNHG 124
+ L N+ L + L PL TP+ FA LT + + I + PG P +
Sbjct: 631 VVLLQWYQPMNKFLLVRQVL-FPLPTPL--SVFALLTGPGSELPAVCIGVSPGRPGKSVL 687
Query: 125 NYVVRLGHVVKWLGEQA-EAMGVEIYPGIPASEVLYHGDGSVK 166
+ VR G + WLGE + E G + V+ DGSVK
Sbjct: 688 FHTVRFGALSCWLGEMSTEHRGPVQVTQVEEDMVMVLMDGSVK 730
>sp|Q5UWH2|DLDH3_HALMA Dihydrolipoyl dehydrogenase 3 OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=lpdA3
PE=3 SV=1
Length = 477
Score = 36.6 bits (83), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL 78
DV+++G GP G AAIR QLA L V LVEK E GG L+ I AL
Sbjct: 11 DVLVIGAGPGGYVAAIRAAQLA------LDVTLVEK-GEYGGACLNRGCIPSKAL 58
>sp|O05940|DLDH_RHIEC Dihydrolipoyl dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=lpdA PE=3 SV=2
Length = 481
Score = 36.6 bits (83), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL---NE 80
DV+I+G GP G AAIR QL LK +VE+ +GG L+ I AL E
Sbjct: 6 DVIIIGSGPGGYVAAIRASQLG------LKTAIVER-EHMGGICLNWGCIPTKALLRSAE 58
Query: 81 LL---PDWKDLGAPLNTPVHEDKFAYLTKSKRI 110
+L +KD G L V D A + +S+ +
Sbjct: 59 VLDHANHFKDFGLVLEGSVKPDAKAVVGRSRAV 91
>sp|A6VW16|STHA_MARMS Soluble pyridine nucleotide transhydrogenase OS=Marinomonas sp.
(strain MWYL1) GN=sthA PE=3 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 17/78 (21%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI----------LSGAVI 73
DVV++G GPAG AA+ A K GK +V ++E +++VGG L AV
Sbjct: 7 DVVVLGTGPAGEGAAMS----AAKAGK--RVAVIEASSQVGGSCTHLGTIPSKALRHAVK 60
Query: 74 DPIALNELLPDWKDLGAP 91
+ IA N P ++D+G P
Sbjct: 61 EIIAFNT-NPMFRDIGEP 77
>sp|Q4PC85|THI4_USTMA Thiamine thiazole synthase OS=Ustilago maydis (strain 521 / FGSC
9021) GN=UM02278 PE=3 SV=1
Length = 362
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
Query: 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA------AEVGGHILSGAVIDP 75
V+DVVI+G G AG+ A L K +L++ ++E + A +GG ++SG VI
Sbjct: 86 VSDVVIIGAGSAGLTCAYTLA----KQRPDLRITMLEASVAPGGGAWLGGQLMSGMVIRK 141
Query: 76 IALNELLPDWKDLGAPLN 93
A N L+ ++G P +
Sbjct: 142 PAHNLLV----EIGVPFD 155
>sp|O00087|DLDH_SCHPO Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dld1 PE=2 SV=2
Length = 511
Score = 35.8 bits (81), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL 78
D+ ++GGGP G AAIR QL LK VEK +GG L+ I AL
Sbjct: 47 DLCVIGGGPGGYVAAIRGAQLG------LKTICVEKRGTLGGTCLNVGCIPSKAL 95
>sp|A8ZVP3|THI4_DESOH Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans
(strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1
Length = 258
Score = 35.8 bits (81), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELL 82
DV +VGGGP+G+ AA RL + KV L E+ +GG + GA++ NE++
Sbjct: 27 DVAVVGGGPSGLVAAWRLARAGR------KVALFERKLSIGGGMWGGAML----FNEIV 75
>sp|C4YNP4|THI4_CANAW Thiamine thiazole synthase OS=Candida albicans (strain WO-1)
GN=THI4 PE=3 SV=1
Length = 354
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 14/90 (15%)
Query: 9 SDQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE------ 62
+ ++ D+++F + +D+VI+G G AG++AA L K+ +LK+ ++E +
Sbjct: 60 TRRYFADLDKFAE-SDIVIIGAGSAGLSAAYTLG----KNRPDLKIAIIEASVSPGGGCW 114
Query: 63 VGGHILSGAVIDPIA---LNELLPDWKDLG 89
+GG + S V+ A L+++ D++D G
Sbjct: 115 LGGQLFSAMVLRKPAHLFLDDMGLDYEDEG 144
>sp|Q5ANB7|THI4_CANAL Thiamine thiazole synthase OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=THI4 PE=3 SV=1
Length = 354
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 14/90 (15%)
Query: 9 SDQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE------ 62
+ ++ D+++F + +D+VI+G G AG++AA L K+ +LK+ ++E +
Sbjct: 60 TRRYFADLDKFAE-SDIVIIGAGSAGLSAAYTLG----KNRPDLKIAIIEASVSPGGGCW 114
Query: 63 VGGHILSGAVIDPIA---LNELLPDWKDLG 89
+GG + S V+ A L+++ D++D G
Sbjct: 115 LGGQLFSAMVLRKPAHLFLDDMGLDYEDEG 144
>sp|Q46904|YGCN_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YgcN
OS=Escherichia coli (strain K12) GN=ygcN PE=3 SV=2
Length = 423
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 20/128 (15%)
Query: 52 LKVCLVEKAAEV-------GGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFAYL 104
L V L+E+A E+ GG + + AL ELLP + L APL + + + L
Sbjct: 28 LSVLLLERA-EIPGSKNLSGGRLYTH------ALAELLPQFH-LTAPLERRITHESLSLL 79
Query: 105 TKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGS 164
T G+ + V+R WL +AE GVE PG + LY +G
Sbjct: 80 TPD---GVTTFSSLQPGGESWSVLR-ARFDPWLVAEAEKEGVECIPGATV-DALYEENGR 134
Query: 165 VKGIATGD 172
V G+ GD
Sbjct: 135 VCGVICGD 142
>sp|A6US00|GGR_METVS Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_1375 PE=3 SV=1
Length = 390
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
M E+ DVV+VG GPAG ++ A K+G K L+EKA E+G P
Sbjct: 1 MRALEESYDVVVVGAGPAGSMSSYN----ASKNGA--KTLLIEKAQEIG---------TP 45
Query: 76 IALNELLPDWKDLG 89
+ E +P + G
Sbjct: 46 VRCAEAIPRIESFG 59
>sp|O18480|DLDH_MANSE Dihydrolipoyl dehydrogenase OS=Manduca sexta PE=2 SV=1
Length = 497
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL 78
AD+V++G GP G AAI+ QL +KV VEK +GG L+ I AL
Sbjct: 31 ADLVVIGAGPGGYVAAIKAAQLG------MKVVSVEKEPSLGGTCLNVGCIPSKAL 80
>sp|Q8ZEB6|FUMC_YERPE Fumarate hydratase class II OS=Yersinia pestis GN=fumC PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 117 GMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIA 176
G +N H Y VR+ + + L Q + + + L HG G++KG+A + IA
Sbjct: 233 GTGLNTHPEYAVRVANEIATLTRQPFITAPNKFESLGTCDALVHGHGALKGLAASLMKIA 292
Query: 177 KD 178
D
Sbjct: 293 ND 294
>sp|Q54EW2|Y9130_DICDI Putative bifunctional amine oxidase DDB_G0291301 OS=Dictyostelium
discoideum GN=DDB_G0291301 PE=1 SV=1
Length = 1080
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Query: 17 ERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPI 76
E +D DV++ GGGP G+A A R K GK KV +EK+ G SG V+ +
Sbjct: 3 EFLKDDYDVIVCGGGPVGLATAYR----CAKAGK--KVLCLEKSVFFNGGGSSGDVVRML 56
Query: 77 AL-----------NELLPDWKDLG 89
+E L WK+LG
Sbjct: 57 RTMYTEDYMADLAHETLGLWKELG 80
>sp|P53572|FIXC_AZOVI Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1
Length = 427
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 52 LKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK--------FAY 103
LKV +E+ G + GA++ A+ +++PD++D APL + E + + Y
Sbjct: 28 LKVLQIERGETPGSKNVQGAILYADAIEKIIPDFRD-DAPLERHLIEQRVWVMDDASYGY 86
Query: 104 LTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGV 146
+S+ P P N + ++R+ H +W ++A GV
Sbjct: 87 HYRSEDFNKP-----PYNRYT--IIRV-HFDQWFNKKAREAGV 121
>sp|A6VJ23|GGR_METM7 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_1386
PE=3 SV=1
Length = 390
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
M D DVV+VG GPAG A+ A K+G K L+EK+ E+G P
Sbjct: 1 MRALNDSYDVVVVGAGPAGSMASYN----ASKNGA--KTLLIEKSQEIG---------TP 45
Query: 76 IALNELLPDWKDLG 89
+ E +P ++ G
Sbjct: 46 VRCAEAVPRIEEFG 59
>sp|A4FZB4|GGR_METM5 Digeranylgeranylglycerophospholipid reductase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1250
PE=3 SV=1
Length = 390
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 15/74 (20%)
Query: 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDP 75
M + DVV+VG GPAG A+ A K+G K L+EK+ E+G P
Sbjct: 1 MRALNNSYDVVVVGAGPAGSMASYN----ASKNGA--KTLLLEKSQEIG---------TP 45
Query: 76 IALNELLPDWKDLG 89
+ E +P +D G
Sbjct: 46 VRCAEAVPRLEDFG 59
>sp|Q6CZI7|GLPB_ERWCT Anaerobic glycerol-3-phosphate dehydrogenase subunit B OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=glpB PE=3 SV=1
Length = 420
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 11/71 (15%)
Query: 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLP 83
DVVI+GGG AG+ IRL ++ K C + A + H SGA + L LP
Sbjct: 4 DVVIIGGGLAGLTCGIRL-------AEQGKRCAIVSAGQNALHFSSGA----LDLLSHLP 52
Query: 84 DWKDLGAPLNT 94
D + + PL+
Sbjct: 53 DGQPVSQPLDA 63
>sp|P32397|PPOX_BACSU Protoporphyrinogen oxidase OS=Bacillus subtilis (strain 168)
GN=hemY PE=1 SV=1
Length = 470
Score = 34.7 bits (78), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 25 VVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67
VVI+GGG G+AAA +++ ++ L++ LVE + VGG I
Sbjct: 8 VVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50
>sp|P50970|DLDH_ZYMMO Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=lpd PE=3 SV=3
Length = 466
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73
D D++++GGGP G AAIR QL LKV LVE+ +GG L+ I
Sbjct: 3 DHFDLIVLGGGPGGYVAAIRAAQL------NLKVALVER-VHLGGICLNWGCI 48
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,547,935
Number of Sequences: 539616
Number of extensions: 3356394
Number of successful extensions: 10451
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 350
Number of HSP's that attempted gapping in prelim test: 10256
Number of HSP's gapped (non-prelim): 496
length of query: 182
length of database: 191,569,459
effective HSP length: 110
effective length of query: 72
effective length of database: 132,211,699
effective search space: 9519242328
effective search space used: 9519242328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)